Citrus Sinensis ID: 024839

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
Protein Sequence
MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEGHG
Secondary Structure (PSIPRED)
cccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEcEEcccHHHHHHHHHHHHHHHcccEEEEEcccccccccccHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEEccHHHccccccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHcHHHcccccEEEEEcccEEEccccHHHHcccc
Coil and Loop (DISEMBL)
mskprlqgKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQvvssigpekasyrhcdvrdeKQVEETVAYAIEKYGSldimysnagvagpvgtilDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGsiicttstastvggsgphaytisKHGLLGLVRSAASElgkhgirvncvspfgvatpfsagtindVEGFVCKVANLKGIVLKAKHVAEAALFLasdesayvsghdlvvdGGFTAVTNVMSMLEGHG
Flexible Loop (DISEMBL)
MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSigpekasyrhcdvrdekQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTtstastvggsgpHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEGHG
Low Complexity Region (SEG)
MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICttstastvggsgPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEGHG
Disordered region (IsUnstruct)
********KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVM*******
Disordered Region (DISOPRED)
**KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN*********ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM*****
Disordered Region (DISEMBL)
MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEGHG
Disordered Region (DISPRO)
****RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSML****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEGHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	262	2.2.26 [Sep-21-2011]
Q94K41	257	Short-chain dehydrogenase	yes	no	0.958	0.976	0.6	1e-82
F4J300	259	Short-chain dehydrogenase	no	no	0.958	0.969	0.566	4e-78
O80713	257	Short-chain dehydrogenase	no	no	0.969	0.988	0.564	8e-78
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.938	0.825	0.552	1e-75
O80714	258	Short-chain dehydrogenase	no	no	0.954	0.968	0.531	4e-72
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.969	0.951	0.471	9e-62
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.965	0.834	0.472	1e-61
Q7FAE1	274	Momilactone A synthase OS	no	no	0.946	0.905	0.517	1e-59
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.969	0.891	0.444	1e-55
P50160	336	Sex determination protein	N/A	no	0.958	0.747	0.442	2e-55

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  306 bits (783), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/255 (60%), Positives = 186/255 (72%), Gaps = 4/255 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS  RL GK+ II G ASGIG  + +LF EHGA V+I D+QDELG  V  SIG +KASY 
Sbjct: 1   MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDV +E +VE  V + +EKYG LD+++SNAGV  P  +ILDL++ + DRTIA NL G+ 
Sbjct: 61  HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MV   IRGSI+CTTS A+ + G+ PH YT SKHGLLGL++SA+  LGK+GI
Sbjct: 121 AFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGI 180

Query: 181 RVNCVSPFGVATPFSAGTI----NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVN V+PFGVATP          N VE      ANLKGIVLKA+HVAEAALFLASDESAY
Sbjct: 181 RVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAY 240

Query: 237 VSGHDLVVDGGFTAV 251
           VSG +L VDGG++ V
Sbjct: 241 VSGQNLAVDGGYSVV 255

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  291 bits (744), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 144/254 (56%), Positives = 187/254 (73%), Gaps = 3/254 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS  RL GK+ II G ASGIG   A+LF +HGA V+I D+Q+ELG  V  SIG +KAS+ 
Sbjct: 1   MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CD+ DE +VE  V + +EK+G LD+++SNAGV  P G+ILDLD+  FDRT+A N+ G+ 
Sbjct: 61  RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MVA+  RGSI+CTTS  + +GG GPH+YT SKH LLGLVRSA   LGK+GI
Sbjct: 121 AFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGI 180

Query: 181 RVNCVSPFGVA---TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           RVN V+P+GVA   T ++  T+  VE +    A LKG+VLKA+HVA+AALFLASD+S Y+
Sbjct: 181 RVNGVAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYI 240

Query: 238 SGHDLVVDGGFTAV 251
           SG +L VDGG++ V
Sbjct: 241 SGQNLGVDGGYSVV 254

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  290 bits (741), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 145/257 (56%), Positives = 185/257 (71%), Gaps = 3/257 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS  RL GK+AII G ASGIG    +LF +HGA V+I D Q+ELG  V  S+G +KAS+ 
Sbjct: 1   MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV +EK+VE  V + +EKYG LD+++SNAGV    G+ LDL++ QFDRT+A N+ G+ 
Sbjct: 61  RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MV    RGSI+CTTS AS +GG GPHAYT SKH LLGLV+SA   LGK+GI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query: 181 RVNCVSPFGVATPFSAG---TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           RVN V+P+ VAT  ++    T+  VE +      LKG+VLKA+HVAEAALFLASD+SAYV
Sbjct: 181 RVNGVAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYV 240

Query: 238 SGHDLVVDGGFTAVTNV 254
           SG +L VDGG++ V  +
Sbjct: 241 SGQNLAVDGGYSVVKPI 257

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  283 bits (723), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 138/250 (55%), Positives = 185/250 (74%), Gaps = 4/250 (1%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK+AII G ASGIG    +LF +HGA V+I DIQ+ELG  +  SIG +KAS+  C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DE  VE  V + +EK+G LD+++SNAGV    G++LDLD+  FDRT+A N+ G+   +K+
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           AAR MVA+  RGSI+CTTS A+ +GG GPH+YT SKH LLGL+RSA + LG++GIRVN V
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query: 186 SPFGVAT----PFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           +P+GVAT     ++   +  +E +   + NLKG+VLKA+H+AEAALFLASD+S Y+SG +
Sbjct: 224 APYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQN 283

Query: 242 LVVDGGFTAV 251
           LVVDGGF+ V
Sbjct: 284 LVVDGGFSVV 293

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  271 bits (693), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 135/254 (53%), Positives = 182/254 (71%), Gaps = 4/254 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS  RL+GK+ II G ASGIG   A+LF +HGA V+I D+Q+ELG  V   IG +KAS+ 
Sbjct: 1   MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV +E +VE+ V + +EK+G LD+++SNAGV  P+ + LD D+ +FDR +A N+ G+ 
Sbjct: 61  RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MV    RGSI+CTTS ++ +GG G H YT SKHGL+GL+RSA  +LGK+GI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGI 179

Query: 181 RVNCVSPFGVATPFSAG---TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           RVN V+P+ VATP ++    T   +E +      LKG+VLKA HVA+ ALFLASD+SAY+
Sbjct: 180 RVNGVAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYI 239

Query: 238 SGHDLVVDGGFTAV 251
           SG +L VDGG+T V
Sbjct: 240 SGQNLAVDGGYTVV 253

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  236 bits (603), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 126/267 (47%), Positives = 174/267 (65%), Gaps = 13/267 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEK-ASYRHCD 63
           RL+GKVA++ G ASGIGE+ A+LF EHGA + I D+QDELG QV   +G +  A Y HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMA 122
           V  E  V   V +  EKYG++DIM +NAG+ G  V  I D D  +F +    N+ G  + 
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           +K+AAR+M+  K++GSI+   S +S + G+GPH YT +KH ++GL +S A+ELG+HGIRV
Sbjct: 122 MKHAARIMIP-KMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRV 180

Query: 183 NCVSPFGVATPFSAGTINDVE-------GFVCKV---ANLKGIVLKAKHVAEAALFLASD 232
           NCVSP+ V T  S   + + E       GF+  V   ANLKG+ L    VAEA L+LA++
Sbjct: 181 NCVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATE 240

Query: 233 ESAYVSGHDLVVDGGFTAVTNVMSMLE 259
           ES YVSG +LV+DGGF+   + + + E
Sbjct: 241 ESKYVSGLNLVIDGGFSIANHTLQVFE 267

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/273 (47%), Positives = 167/273 (61%), Gaps = 20/273 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKAS----YR 60
           RL+GKVAII G A GIG+AT  LFA HGA V+IAD+ +  G+ +  S+   K S    + 
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG---TILDLDMAQFDRTIATNLA 117
            CDV  E  VE  V   + +YG LDI+++NAGV G      +ILD D  +FD  +  N+ 
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G  + +K+ AR M+    +G II T S A  +GG GPHAYT SKH ++GL ++AA ELGK
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEG-------------FVCKVANLKGIVLKAKHVAE 224
           +GIRVNC+SPFGVAT           G             FV  +ANLKG  L+A  +AE
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 225 AALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           AAL+LASDES YV+GH+LVVDGG T   N + +
Sbjct: 271 AALYLASDESKYVNGHNLVVDGGVTTARNCVGL 303

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  229 bits (585), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/255 (51%), Positives = 175/255 (68%), Gaps = 7/255 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L GKVA+I G ASGIG  TA+LF +HGA V++ADIQDELG  +V+ +GP+ +SY HCDV
Sbjct: 14  KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDV 73

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAV 123
            +E  V   V +A+ ++G LD+M++NAGV+G P   + +     F+R +A NL G  +  
Sbjct: 74  TNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGT 133

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K+AARVM   + RGSII T S +S+V G+  HAYT SKH L+G   +AA ELG+HGIRVN
Sbjct: 134 KHAARVMAPAR-RGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVN 192

Query: 184 CVSPFGVATPF--SAGTIND--VEGFVCKVANLKGI-VLKAKHVAEAALFLASDESAYVS 238
           CVSP GVATP   +A  ++D  +E  +   ANLKG   LKA  +A AALFLASD+  YVS
Sbjct: 193 CVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVS 252

Query: 239 GHDLVVDGGFTAVTN 253
           G +L VDGG + V +
Sbjct: 253 GQNLRVDGGLSVVNS 267

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  216 bits (550), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/270 (44%), Positives = 169/270 (62%), Gaps = 16/270 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYR 60
           RL GKVA+I G A+GIGE+  +LF +HGA V I D+QD+LG +V  S+      E A + 
Sbjct: 17  RLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFI 76

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGS 119
           H DVR E  +   V +A++ +G+LDI+ +NAG+ G P   I +  +++F+ T   N+ G+
Sbjct: 77  HGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGA 136

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
            +++K+AARVM+  K +GSI+   S    VGG GPH+Y  SKH +LGL RS A+ELG+HG
Sbjct: 137 FLSMKHAARVMIPEK-KGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query: 180 IRVNCVSPFGVATPFSAGTINDVE----------GFVCKVANLKGIVLKAKHVAEAALFL 229
           IRVNCVSP+ VAT  +   + + E           F    ANLKG+ L    VA A LFL
Sbjct: 196 IRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFL 255

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNVMSMLE 259
           ASD+S Y+SG +L++DGGFT   +   +  
Sbjct: 256 ASDDSRYISGDNLMIDGGFTCTNHSFKVFR 285

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  216 bits (549), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/287 (44%), Positives = 170/287 (59%), Gaps = 36/287 (12%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKVAI+ G A GIGEA  +LFA+HGA V+IADI D  G  + S++GP+  S+  CDV
Sbjct: 52  RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDV 110

Query: 65  RDEKQVEETVAYAIEKYG-SLDIMYSNAGVAG----PVGTILDLDMAQFDRTIATNLAGS 119
             E  V   V +A+ ++G  LD+  +NAGV G       +IL  D A+FDR +  N  G+
Sbjct: 111 SVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGA 170

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
            + +K+AAR M   +  GSI+   S A+ +GG GPHAYT SKH ++GL ++AA EL  HG
Sbjct: 171 ALGMKHAARAMAPRRA-GSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHG 229

Query: 180 IRVNCVSPFGVATPF-----------------------------SAGTINDVEGFVCKVA 210
           +RVNCVSPFGVATP                              S   +  +E  V  +A
Sbjct: 230 VRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLA 289

Query: 211 NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
            LKG  L+ + +AEA LFLASDE+ Y+SGH+LVVDGG T   N++ +
Sbjct: 290 TLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNLIGL 336

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
359480210	262	PREDICTED: momilactone A synthase-like [	0.977	0.977	0.665	2e-99
224130904	262	predicted protein [Populus trichocarpa]	0.984	0.984	0.652	4e-97
225437701	264	PREDICTED: momilactone A synthase-like [	0.988	0.981	0.669	3e-96
255548317	271	short chain alcohol dehydrogenase, putat	0.938	0.907	0.656	2e-92
357511477	265	Xanthoxin dehydrogenase [Medicago trunca	0.984	0.973	0.641	1e-91
255644557	264	unknown [Glycine max]	0.980	0.973	0.616	3e-91
356505661	264	PREDICTED: sex determination protein tas	0.980	0.973	0.613	1e-90
255644882	264	unknown [Glycine max]	0.980	0.973	0.609	5e-90
356572830	267	PREDICTED: sex determination protein tas	0.965	0.947	0.612	3e-88
357511475	266	Momilactone A synthase [Medicago truncat	0.965	0.951	0.631	6e-88

>gi|359480210|ref|XP_002272942.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 173/260 (66%), Positives = 214/260 (82%), Gaps = 4/260 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS+PRL+GKVA++ GAASGIGE   +LFAE+GAFV++AD+QDELG+QV+SSIG EK SYR
Sbjct: 1   MSRPRLEGKVALVTGAASGIGEEAVRLFAENGAFVVVADVQDELGHQVISSIGSEKVSYR 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDEKQVEETVAY ++KYGSLD+++SNAG+ GP+  IL+LD+  FD T+ATN+ G  
Sbjct: 61  HCDVRDEKQVEETVAYTLDKYGSLDVLFSNAGIIGPLTGILELDLQGFDNTMATNVRGVA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MVA  IRGSIICTTS A+ +GG+GPHAYT SKH L+GLVR+A SELG +GI
Sbjct: 121 ATIKHAARAMVARSIRGSIICTTSVAAALGGAGPHAYTTSKHALIGLVRAACSELGAYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVNCVSPFG ATP S    N    +VE  +  ++NLKGIVLKA+H+AEAA+FLASDESAY
Sbjct: 181 RVNCVSPFGTATPLSCRAYNLEPSEVEANILALSNLKGIVLKARHIAEAAVFLASDESAY 240

Query: 237 VSGHDLVVDGGFTAVTNVMS 256
           +SGH+L +DGGFT V +  S
Sbjct: 241 ISGHNLAIDGGFTVVNHSFS 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130904|ref|XP_002320953.1| predicted protein [Populus trichocarpa] gi|222861726|gb|EEE99268.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 171/262 (65%), Positives = 212/262 (80%), Gaps = 4/262 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MSKPRL+GKVA+I GAASGIGE   KLF E+G FV+ AD+QD+LG+QVV+SIG ++A+YR
Sbjct: 1   MSKPRLEGKVALITGAASGIGEEAVKLFVENGGFVVAADVQDDLGHQVVASIGADRATYR 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDEKQVEETV Y ++KYG LD+++SNAG+ GP+  IL+LD+  FD T+ATN+ G  
Sbjct: 61  HCDVRDEKQVEETVKYIMDKYGKLDVLFSNAGIIGPLTGILELDIEGFDNTMATNVRGVA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MV+  IRGSIICTTS AS++ G+GPHAYT SKH L+GLVR+A SELG +GI
Sbjct: 121 ATIKHAARAMVSKNIRGSIICTTSVASSLAGTGPHAYTTSKHALVGLVRAACSELGAYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVNC+SP+GVATP S    N    +VE   C +ANLKGIVLKA+H+AEAALFLASDESAY
Sbjct: 181 RVNCISPYGVATPLSCRAYNLQPSEVEANSCALANLKGIVLKARHIAEAALFLASDESAY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSML 258
           +SGH+L VDGGFT V +  S +
Sbjct: 241 ISGHNLAVDGGFTVVNHSFSAI 262

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437701|ref|XP_002272981.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/263 (66%), Positives = 210/263 (79%), Gaps = 4/263 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M   RL+GKVAII GAASGIGEA AKLFAE+GAFV+IADIQDELG+QVV+SIGPEK+SY 
Sbjct: 1   MKGKRLEGKVAIITGAASGIGEAAAKLFAENGAFVVIADIQDELGHQVVASIGPEKSSYF 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HC+VRDE+QVEETVAYAI+KYG+LDIM+SNA + GP+G+IL++DM  FD TIATN  G  
Sbjct: 61  HCNVRDERQVEETVAYAIQKYGTLDIMFSNAAITGPIGSILEMDMDGFDDTIATNFRGPA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR MV  ++RGSIICT S +ST+GGSGP AYT SKH +LGLVRSAA +LG++GI
Sbjct: 121 STIKHAARAMVEKQVRGSIICTGSVSSTLGGSGPPAYTASKHAVLGLVRSAADDLGQYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVNCVSPF VAT  S G  N     VE      + LKGI+LK +HVAEAALFLASDESAY
Sbjct: 181 RVNCVSPFAVATRMSTGMYNVDASIVEASASSFSQLKGIILKPRHVAEAALFLASDESAY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSMLE 259
           V+GH+L VDGG + ++   S L 
Sbjct: 241 VTGHNLAVDGGVSVLSTTRSRLR 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548317|ref|XP_002515215.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223545695|gb|EEF47199.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/250 (65%), Positives = 201/250 (80%), Gaps = 4/250 (1%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GKVA+I GAASGIGE   +LF E+GAFVI AD+QD+LG +VV S+G +KA+YRHCDVR
Sbjct: 19  LGGKVALITGAASGIGEQAVRLFVENGAFVIAADVQDDLGQEVVESVGTDKATYRHCDVR 78

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DEKQVEETV YA+EKYG LD+++SNAG+ GP+  IL+LD++ FD T+ATN+ G    +K+
Sbjct: 79  DEKQVEETVNYAVEKYGKLDVLFSNAGILGPLTGILELDLSGFDNTMATNVRGVAATIKH 138

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           AAR MVA  IRGSIICT S AS+VGG+GPHAYT+SKH +LGLVR+A  ELG +GIRVNC+
Sbjct: 139 AARAMVAKNIRGSIICTASVASSVGGTGPHAYTVSKHAILGLVRTACCELGNYGIRVNCI 198

Query: 186 SPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           SPFGVATP +    N    +VE     + NLKGI LKAK+VAE ALFLASDESAY+SGH+
Sbjct: 199 SPFGVATPLTCNAYNMKPSEVEANCSNLGNLKGIALKAKNVAETALFLASDESAYISGHN 258

Query: 242 LVVDGGFTAV 251
           LV+DGG+T V
Sbjct: 259 LVIDGGYTVV 268

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511477|ref|XP_003626027.1| Xanthoxin dehydrogenase [Medicago truncatula] gi|355501042|gb|AES82245.1| Xanthoxin dehydrogenase [Medicago truncatula]

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 168/262 (64%), Positives = 208/262 (79%), Gaps = 4/262 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M+K RL+GKVAII GAASGIGE T KLFAE+GAFVI  DIQDELG++V  SIG +K +Y 
Sbjct: 1   MTKFRLEGKVAIITGAASGIGEETVKLFAENGAFVIAVDIQDELGHKVADSIGSDKVTYH 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDEKQVEET+ + +EK+G +DI++SNAG+ G +  ILDLD+ +F++T+ATN+ G+ 
Sbjct: 61  HCDVRDEKQVEETIHFTLEKHGCIDILFSNAGIIGSLSGILDLDLNEFEKTMATNVVGAA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+AAR M+A KIRGSIICTTS A+++GG+GP+ YT SKH LLGLV+SA  ELG +GI
Sbjct: 121 ATIKHAARAMIAKKIRGSIICTTSVAASIGGTGPNGYTTSKHALLGLVKSACGELGGYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVN +SPFGVATP S    N    +VE      ANLKGIVLKAKHVAEAALFLASDE+ Y
Sbjct: 181 RVNSISPFGVATPLSCIAYNLEPHEVESSSSSHANLKGIVLKAKHVAEAALFLASDEAVY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSML 258
           +SGH+LVVDGGF+ V N  S +
Sbjct: 241 ISGHNLVVDGGFSVVRNTPSAM 262

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644557|gb|ACU22781.1| unknown [Glycine max]

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 161/261 (61%), Positives = 200/261 (76%), Gaps = 4/261 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M K RL+GKVA+I GAASGIGE T +LFAEHGA ++ ADIQDE G+QV +SIG E+ +Y 
Sbjct: 1   MPKQRLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYH 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDE QVEET+ + +EK+G +D+++SNAG+ G +  ILDLD+ +FD TIATN+ G  
Sbjct: 61  HCDVRDENQVEETIKFTLEKHGRIDVLFSNAGIIGSLSGILDLDLNEFDNTIATNVRGVA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+ AR MVA   RGSIICTTS A+ +GG+GPH YT SKH LLGLV+SA SELG +GI
Sbjct: 121 ATIKHTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVN +SPFGVATP +  T N     VE   C  ANLKG+VLKA+H+AEAALFLASD++ Y
Sbjct: 181 RVNSISPFGVATPLACKTFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAVY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSM 257
           +SGH+LVVDGGF+ V    S 
Sbjct: 241 ISGHNLVVDGGFSMVNRSYSF 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505661|ref|XP_003521608.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 160/261 (61%), Positives = 199/261 (76%), Gaps = 4/261 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M K RL+GKVA+I GAASGIGE T +LFAEHGA ++ ADIQDE G+QV +SIG E+ +Y 
Sbjct: 1   MPKQRLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYH 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDE QVEET+ + +EK+G +D+++SNAG+ G +  ILDLD+ +FD TIATN+ G  
Sbjct: 61  HCDVRDENQVEETIKFTLEKHGRIDVLFSNAGIIGSLSGILDLDLNEFDNTIATNVRGVA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+ AR MVA   RGSIICTTS A+ +GG+GPH YT SKH LLGLV+SA SELG +GI
Sbjct: 121 ATIKHTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVN +SPFGVATP +    N     VE   C  ANLKG+VLKA+H+AEAALFLASD++ Y
Sbjct: 181 RVNSISPFGVATPLACKAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAVY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSM 257
           +SGH+LVVDGGF+ V    S 
Sbjct: 241 ISGHNLVVDGGFSMVNRSYSF 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644882|gb|ACU22941.1| unknown [Glycine max]

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 198/261 (75%), Gaps = 4/261 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M K RL+GKVA+I GAASGIGE T +LFAEHGA ++ ADIQDE G+QV +SIG E+ +Y 
Sbjct: 1   MPKQRLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYH 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           HCDVRDE QVEET+ + +EK+G +D+++ NAG+ G +  ILDLD+ +FD TIATN+ G  
Sbjct: 61  HCDVRDENQVEETIKFTLEKHGRIDVLFGNAGIIGSLSGILDLDLNEFDNTIATNVRGVA 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             +K+ AR MVA   RGSIICTTS A+ +GG+GPH YT SKH LLGLV+SA SELG +GI
Sbjct: 121 ATIKHTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGI 180

Query: 181 RVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           RVN +SPFGVATP +    N     VE   C  ANLKG+VLKA+H+AEAALFLASD++ Y
Sbjct: 181 RVNSISPFGVATPLACKAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAVY 240

Query: 237 VSGHDLVVDGGFTAVTNVMSM 257
           +SGH+LVVDGGF+ V    S 
Sbjct: 241 ISGHNLVVDGGFSMVNRSYSF 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572830|ref|XP_003554568.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 158/258 (61%), Positives = 198/258 (76%), Gaps = 5/258 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+GKVA+I GAASGIGE T +LFAEHGA ++  DIQDE G++V +SIG E+ +Y HCDV
Sbjct: 7   RLEGKVALITGAASGIGEETVRLFAEHGALIVATDIQDEQGHRVAASIGSERVTYHHCDV 66

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           RDE QVEET+ + +EK+G +D+++SNAGV G +  ILDLD+ +FD T+ATN+ G    +K
Sbjct: 67  RDENQVEETINFTLEKHGRIDVLFSNAGVIGSLSGILDLDLNEFDNTMATNVRGVAATIK 126

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           + AR MVA   RGSIICTTS A+T+GG+GPH YT SKH LLGLV+SA SELG +GIRVN 
Sbjct: 127 HTARAMVAKSTRGSIICTTSVAATIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNS 186

Query: 185 VSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA-YVSG 239
           +SPFGVATP +    N     VE   C  ANLKG+VLKA+H+AEAALFLASD++A Y+SG
Sbjct: 187 ISPFGVATPLACKAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAAVYISG 246

Query: 240 HDLVVDGGFTAVTNVMSM 257
           H+LVVDGGF+ V    S 
Sbjct: 247 HNLVVDGGFSVVNRSYSF 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511475|ref|XP_003626026.1| Momilactone A synthase [Medicago truncatula] gi|355501041|gb|AES82244.1| Momilactone A synthase [Medicago truncatula]

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 163/258 (63%), Positives = 202/258 (78%), Gaps = 5/258 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS+ RL+GKVAI+ G ASGIG  TAK F E+GAFV+IADI DELG+QV +SIG +K SY 
Sbjct: 1   MSRKRLEGKVAIVTGGASGIGAETAKTFVENGAFVVIADINDELGHQVATSIGLDKVSYH 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGS 119
           HCDVRDEKQVEETVA+A+EKYG+LDIM+SNAG+ G +  +IL+ D+ +FD T+A N+ GS
Sbjct: 61  HCDVRDEKQVEETVAFALEKYGTLDIMFSNAGIEGGMSSSILEFDLNEFDNTMAINVRGS 120

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           + A+K+AAR MV  KIRGSIICT S A++V G+  H Y  SKHGLLGLVRS   ELG +G
Sbjct: 121 LAAIKHAARFMVERKIRGSIICTASVAASVAGNRGHDYVTSKHGLLGLVRSTCGELGAYG 180

Query: 180 IRVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           IRVN +SP+GVATP +   +N     VE  +   ANLKGI LKA H+AEAALFLAS+ESA
Sbjct: 181 IRVNSISPYGVATPLACRALNMEMSKVEANMKDSANLKGITLKATHIAEAALFLASEESA 240

Query: 236 YVSGHDLVVDGGFTAVTN 253
           Y+SGH+LVVDGGF+ + +
Sbjct: 241 YISGHNLVVDGGFSVINS 258

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.958	0.976	0.580	2e-72
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.958	0.969	0.543	8e-69
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.958	0.976	0.539	1.2e-67
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.938	0.825	0.524	5.8e-66
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.954	0.968	0.507	7.6e-64
UNIPROTKB|Q5C9I9	265	Q5C9I9 "(-)-isopiperitenol deh	0.938	0.928	0.523	3.5e-59
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.965	0.834	0.461	8.6e-56
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.942	0.866	0.446	1.2e-51
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.935	0.714	0.455	8.3e-51
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.931	0.797	0.431	2.2e-50

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
 Identities = 148/255 (58%), Positives = 178/255 (69%)

Query:     1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
             MS  RL GK+ II G ASGIG  + +LF EHGA V+I D+QDELG  V  SIG +KASY 
Sbjct:     1 MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             HCDV +E +VE  V + +EKYG LD+++SNAGV  P  +ILDL++ + DRTIA NL G+ 
Sbjct:    61 HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTA 120

Query:   121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
               +K+AAR MV   IRGSI+C            PH YT SKHGLLGL++SA+  LGK+GI
Sbjct:   121 AFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGI 180

Query:   181 RVNCVSPFGVATPFSAGTI----NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
             RVN V+PFGVATP          N VE      ANLKGIVLKA+HVAEAALFLASDESAY
Sbjct:   181 RVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAY 240

Query:   237 VSGHDLVVDGGFTAV 251
             VSG +L VDGG++ V
Sbjct:   241 VSGQNLAVDGGYSVV 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 138/254 (54%), Positives = 179/254 (70%)

Query:     1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
             MS  RL GK+ II G ASGIG   A+LF +HGA V+I D+Q+ELG  V  SIG +KAS+ 
Sbjct:     1 MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
              CD+ DE +VE  V + +EK+G LD+++SNAGV  P G+ILDLD+  FDRT+A N+ G+ 
Sbjct:    61 RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAA 120

Query:   121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
               +K+AAR MVA+  RGSI+C            PH+YT SKH LLGLVRSA   LGK+GI
Sbjct:   121 AFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGI 180

Query:   181 RVNCVSPFGVAT---PFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
             RVN V+P+GVAT    ++  T+  VE +    A LKG+VLKA+HVA+AALFLASD+S Y+
Sbjct:   181 RVNGVAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYI 240

Query:   238 SGHDLVVDGGFTAV 251
             SG +L VDGG++ V
Sbjct:   241 SGQNLGVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 137/254 (53%), Positives = 175/254 (68%)

Query:     1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
             MS  RL GK+AII G ASGIG    +LF +HGA V+I D Q+ELG  V  S+G +KAS+ 
Sbjct:     1 MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
              CDV +EK+VE  V + +EKYG LD+++SNAGV    G+ LDL++ QFDRT+A N+ G+ 
Sbjct:    61 RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAA 120

Query:   121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
               +K+AAR MV    RGSI+C            PHAYT SKH LLGLV+SA   LGK+GI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query:   181 RVNCVSPFGVATPFSAG---TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
             RVN V+P+ VAT  ++    T+  VE +      LKG+VLKA+HVAEAALFLASD+SAYV
Sbjct:   181 RVNGVAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYV 240

Query:   238 SGHDLVVDGGFTAV 251
             SG +L VDGG++ V
Sbjct:   241 SGQNLAVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 131/250 (52%), Positives = 176/250 (70%)

Query:     6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
             L GK+AII G ASGIG    +LF +HGA V+I DIQ+ELG  +  SIG +KAS+  C+V 
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    66 DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
             DE  VE  V + +EK+G LD+++SNAGV    G++LDLD+  FDRT+A N+ G+   +K+
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query:   126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             AAR MVA+  RGSI+C            PH+YT SKH LLGL+RSA + LG++GIRVN V
Sbjct:   164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query:   186 SPFGVATPFSAG----TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
             +P+GVAT  ++      +  +E +   + NLKG+VLKA+H+AEAALFLASD+S Y+SG +
Sbjct:   224 APYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQN 283

Query:   242 LVVDGGFTAV 251
             LVVDGGF+ V
Sbjct:   284 LVVDGGFSVV 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 129/254 (50%), Positives = 173/254 (68%)

Query:     1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
             MS  RL+GK+ II G ASGIG   A+LF +HGA V+I D+Q+ELG  V   IG +KAS+ 
Sbjct:     1 MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
              CDV +E +VE+ V + +EK+G LD+++SNAGV  P+ + LD D+ +FDR +A N+ G+ 
Sbjct:    61 RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAA 120

Query:   121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
               +K+AAR MV    RGSI+C             H YT SKHGL+GL+RSA  +LGK+GI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGGGH-HGYTASKHGLVGLIRSACGDLGKYGI 179

Query:   181 RVNCVSPFGVATPFSAG---TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
             RVN V+P+ VATP ++    T   +E +      LKG+VLKA HVA+ ALFLASD+SAY+
Sbjct:   180 RVNGVAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYI 239

Query:   238 SGHDLVVDGGFTAV 251
             SG +L VDGG+T V
Sbjct:   240 SGQNLAVDGGYTVV 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|Q5C9I9 Q5C9I9 "(-)-isopiperitenol dehydrogenase" [Mentha x piperita (taxid:34256)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 132/252 (52%), Positives = 163/252 (64%)

Query:     2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYR 60
             S  +L GKVAI+ G ASGIGE TA+LFAE GA  V+IAD+Q E G  V  SIG  + SY 
Sbjct:     3 SVKKLAGKVAIVTGGASGIGEVTARLFAERGARAVVIADMQPEKGGTVAESIGGRRCSYV 62

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-TILDLDMAQFDRTIATNLAGS 119
             HCD+ DE+QV   V +    YG +D+M+ NAG A     T+LDLD+AQFDR +  N  G+
Sbjct:    63 HCDITDEQQVRSVVDWTAATYGGVDVMFCNAGTASATAQTVLDLDLAQFDRVMRVNARGT 122

Query:   120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
                VK AAR MV     G+IIC               Y +SK G+LGLVRSA+ +LG HG
Sbjct:   123 AACVKQAARKMVELGRGGAIICTASATVHHAGPNLTDYIMSKCGVLGLVRSASLQLGVHG 182

Query:   180 IRVNCVSPFGVATPFSA--G--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
             IRVN VSP  +ATP +A  G  T  DVE F  +V +LKG+ + A+HVAEA  FLASDE+A
Sbjct:   183 IRVNSVSPTALATPLTATIGLRTAADVESFYGQVTSLKGVAITAEHVAEAVAFLASDEAA 242

Query:   236 YVSGHDLVVDGG 247
             +V+GHDL VDGG
Sbjct:   243 FVTGHDLAVDGG 254

GO:0000166 "nucleotide binding" evidence=IDA

GO:0018458 "isopiperitenol dehydrogenase activity" evidence=IDA

GO:0018459 "carveol dehydrogenase activity" evidence=IDA

GO:0031525 "menthol biosynthetic process" evidence=IDA

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 126/273 (46%), Positives = 165/273 (60%)

Query:     5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKAS----YR 60
             RL+GKVAII G A GIG+AT  LFA HGA V+IAD+ +  G+ +  S+   K S    + 
Sbjct:    31 RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG---TILDLDMAQFDRTIATNLA 117
              CDV  E  VE  V   + +YG LDI+++NAGV G      +ILD D  +FD  +  N+ 
Sbjct:    91 SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query:   118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
             G  + +K+ AR M+    +G II             PHAYT SKH ++GL ++AA ELGK
Sbjct:   151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query:   178 HGIRVNCVSPFGVATPF--------SAGTIND-----VEGFVCKVANLKGIVLKAKHVAE 224
             +GIRVNC+SPFGVAT          S G + D     +E FV  +ANLKG  L+A  +AE
Sbjct:   211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query:   225 AALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
             AAL+LASDES YV+GH+LVVDGG T   N + +
Sbjct:   271 AALYLASDESKYVNGHNLVVDGGVTTARNCVGL 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 118/264 (44%), Positives = 165/264 (62%)

Query:     5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEK--ASYR 60
             RL GKVA+I G A+GIGE+  +LF +HGA V I D+QD+LG +V  S+  G  K  A + 
Sbjct:    17 RLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFI 76

Query:    61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGS 119
             H DVR E  +   V +A++ +G+LDI+ +NAG+ G P   I +  +++F+ T   N+ G+
Sbjct:    77 HGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGA 136

Query:   120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
              +++K+AARVM+  K +GSI+             PH+Y  SKH +LGL RS A+ELG+HG
Sbjct:   137 FLSMKHAARVMIPEK-KGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query:   180 IRVNCVSPFGVATPFSAGTINDVE----------GFVCKVANLKGIVLKAKHVAEAALFL 229
             IRVNCVSP+ VAT  +   + + E           F    ANLKG+ L    VA A LFL
Sbjct:   196 IRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFL 255

Query:   230 ASDESAYVSGHDLVVDGGFTAVTN 253
             ASD+S Y+SG +L++DGGFT  TN
Sbjct:   256 ASDDSRYISGDNLMIDGGFTC-TN 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 117/257 (45%), Positives = 155/257 (60%)

Query:     5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
             +L+GKVA+I G ASGIG+ATA  F  HGA VIIADIQ ++G +    +GP  A Y  CDV
Sbjct:    77 KLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCA-YFPCDV 135

Query:    65 RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-TILDLDMAQFDRTIATNLAGSVMAV 123
               E  +   V +A+  +  LDIMY+NAG+      +I+DLD+  FD+ I TN+ G +  +
Sbjct:   136 TKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVRGVMAGI 195

Query:   124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
             K+AARVM+     GSIIC             H Y++SK  ++G+VRS ASEL KH IRVN
Sbjct:   196 KHAARVMIPRN-SGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVN 254

Query:   184 CVSPFGVATPFSAGTINDV-EG--------FVCKVANLKGIVLKAKHVAEAALFLASDES 234
             C+SPF + T F    +  +  G         V     L G V +   VA AA++LASD+S
Sbjct:   255 CISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVANAAVYLASDDS 314

Query:   235 AYVSGHDLVVDGGFTAV 251
              YV+GH+LVVDGGFT V
Sbjct:   315 KYVNGHNLVVDGGFTTV 331

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 111/257 (43%), Positives = 157/257 (61%)

Query:     5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
             +L+GKVA+I G ASG+G+ATA  F  HGA V+IAD+  E G +    +G E A +  CDV
Sbjct:    40 KLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSE-AEFVRCDV 98

Query:    65 RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV--GTILDLDMAQFDRTIATNLAGSVMA 122
               E  +   V   +E+YG LD+MY+NAG+ GP+   +I  LDM +F+R +  N+ G V  
Sbjct:    99 TVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSG 158

Query:   123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
             +K+AA+ M+  +  G I+C            PH+YTISK    G+V+SAASEL +HG+R+
Sbjct:   159 IKHAAKFMIPAR-SGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRI 217

Query:   183 NCVSPFGVATPFSAGTINDVEGFVCK---------VANLKGIVLKAKHVAEAALFLASDE 233
             NC+SP  VATP +   +  V   V +         +  LKG   +   VA+AAL+LAS++
Sbjct:   218 NCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASND 277

Query:   234 SAYVSGHDLVVDGGFTA 250
               YV+GH+LVVDGG TA
Sbjct:   278 GKYVTGHNLVVDGGMTA 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3T046	BDH2_BOVIN	1, ., 1, ., 1, ., 3, 0	0.3505	0.9007	0.9632	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3617	0.9198	0.9796	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3242	0.8816	0.9314	yes	no
P46331	YXBG_BACSU	1, ., -, ., -, ., -	0.3787	0.9580	0.9194	yes	no
Q8JZV9	BDH2_MOUSE	1, ., 1, ., 1, ., 3, 0	0.3466	0.9007	0.9632	yes	no
Q94K41	SDR3B_ARATH	1, ., 1, ., 1, ., -	0.6	0.9580	0.9766	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3495	0.9045	0.9115	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3495	0.9045	0.9115	yes	no
D4A1J4	BDH2_RAT	1, ., 1, ., 1, ., 3, 0	0.3466	0.9007	0.9632	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3441	0.9122	0.9637	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3632	0.9198	0.9163	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3426	0.8969	0.9475	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XIV000563	hypothetical protein (262 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00081696	hypothetical protein (214 aa)			•						0.460
	gw1.XIX.1805.1	hypothetical protein (329 aa)			•						0.400

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	262
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-93
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-89
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-64
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-60
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-58
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-55
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-54
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-54
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-54
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-54
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	8e-53
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-51
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-49
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-49
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-48
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-48
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-48
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-48
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-47
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-47
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-47
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	8e-46
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-45
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-44
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-43
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-43
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	5e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	8e-43
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-42
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-42
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-42
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-41
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-41
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-41
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	5e-40
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-39
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-38
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-38
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-38
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	8e-38
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-37
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-37
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-37
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-37
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-37
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	4e-37
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-37
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-36
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-36
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-36
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-36
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-36
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-36
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-36
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-36
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-35
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-35
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-35
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-35
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-35
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-35
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-35
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-35
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-34
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-34
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	9e-34
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-33
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-33
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-33
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-33
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-33
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-33
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-33
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	7e-33
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-32
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-32
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-32
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-32
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-32
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	6e-32
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-31
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-31
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-31
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	5e-31
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-30
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-30
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-30
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-30
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-30
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	7e-30
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-29
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-29
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-29
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-29
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-29
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-29
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-29
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-29
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-29
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-28
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-28
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-27
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-27
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-27
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	6e-27
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	6e-27
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-27
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-26
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-26
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-26
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-26
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-26
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-26
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-25
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-25
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-25
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-25
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-25
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-25
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	9e-25
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-24
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-24
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-24
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-24
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-24
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-24
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	8e-24
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-24
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	9e-24
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-23
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-23
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-23
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-23
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-23
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	5e-23
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-23
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-23
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-22
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	4e-22
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-22
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-22
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-21
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-21
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-21
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-21
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	6e-21
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-21
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	8e-21
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-20
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-20
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-20
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-20
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	7e-20
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-20
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-20
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-19
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-19
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-19
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-19
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-19
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-19
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	3e-19
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-19
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-18
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-18
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-18
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-18
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-18
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	8e-18
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-17
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-17
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-17
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-17
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-16
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	5e-16
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-15
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-15
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-15
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-15
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-15
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	8e-15
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	8e-15
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-14
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-14
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-14
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-14
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	6e-14
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-13
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	2e-13
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-13
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	7e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-13
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	9e-13
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-12
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-12
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	3e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-11
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-11
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	5e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	6e-11
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	7e-11
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	8e-11
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-10
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	4e-10
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-09
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-09
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-09
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-09
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-09
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-09
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	9e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-08
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-07
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-07
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	2e-07
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-07
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-07
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-07
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-07
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	5e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	6e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	7e-07
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	9e-07
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	9e-07
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-06
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	3e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	5e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	6e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	7e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	7e-06
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-05
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-05
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	5e-05
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	7e-05
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	8e-05
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	1e-04
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	5e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	7e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	9e-04
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.001
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	0.002
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.002

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  274 bits (703), Expect = 2e-93
 Identities = 136/250 (54%), Positives = 174/250 (69%), Gaps = 6/250 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKVAII G ASGIGEATA+LFA+HGA V+IADI D+ G  V + +G    S+ HCDV
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAV 123
             E  V   V  A+ ++G LDIM++NAGV G P  +IL+  + +F+R +  N+ G+ +  
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K+AARVM+  K +GSI+   S A  VGG GPHAYT SKH +LGL RSAA+ELG+HGIRVN
Sbjct: 121 KHAARVMIPAK-KGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 184 CVSPFGVATPF---SAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           CVSP+GVATP      G  ++ +E  V   ANLKG  L+ + +A A L+LASD+S YVSG
Sbjct: 180 CVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVSG 239

Query: 240 HDLVVDGGFT 249
            +LVVDGG T
Sbjct: 240 QNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  265 bits (678), Expect = 5e-89
 Identities = 121/263 (46%), Positives = 167/263 (63%), Gaps = 13/263 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASY 59
           +   RL GKVA++ G A+GIGE+  +LF +HGA V I D+QD+LG  V  S+G      +
Sbjct: 11  LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCF 70

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAG 118
            HCDV  E  V   V + ++K+G+LDIM +NAG+ G P   I ++++++F++    N+ G
Sbjct: 71  FHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKG 130

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
             + +K+AAR+M+  K +GSI+   S AS +GG GPHAYT SKH +LGL RS A+ELGKH
Sbjct: 131 VFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKH 189

Query: 179 GIRVNCVSPFGVATPFSAG----------TINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
           GIRVNCVSP+ V T  +             +     F  K ANLKG+ L    VA A LF
Sbjct: 190 GIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLF 249

Query: 229 LASDESAYVSGHDLVVDGGFTAV 251
           LASDE+ Y+SG +L++DGGFT  
Sbjct: 250 LASDEARYISGLNLMIDGGFTCT 272

Length = 280

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  200 bits (512), Expect = 1e-64
 Identities = 88/236 (37%), Positives = 124/236 (52%), Gaps = 3/236 (1%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRHCDVRDEKQ 69
           A++ GA+SGIG A A+  A  GA V++AD  +E   ++ +       A     DV DE+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 70  VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV 129
           VE  V  A+E++G LDI+ +NAG+A P G + +L    +DR +  NL G  +  + A   
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 130 MVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG 189
           M      G I+  +S A      G  AY  SK  L GL RS A EL  +GIRVN V+P  
Sbjct: 120 MKKQG-GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 190 VATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           V TP  A    +        A   G +   + VAEA +FLASDE++Y++G  + VD
Sbjct: 179 VDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  191 bits (487), Expect = 2e-60
 Identities = 98/258 (37%), Positives = 136/258 (52%), Gaps = 17/258 (6%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHC 62
            RL+GKVAI+ GA+SGIGE  A+ FA  GA V++ D  +E   +V + I    +A     
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV DE  VE  VA A+E++GS+DI+ +NAG     G +LD+D A+FDR  A N+    + 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            + A   M      G+I+   STA      G   Y  SK  ++ L ++ A+ELG   IRV
Sbjct: 121 TQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 183 NCVSPFGVATPFSA-----GTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
           N V+P  V T          T  +   F      L  I L      + +A AALFLASDE
Sbjct: 180 NAVAPVVVETGLLEAFMGEPTPENRAKF------LATIPLGRLGTPEDIANAALFLASDE 233

Query: 234 SAYVSGHDLVVDGGFTAV 251
           +++++G  LVVDGG    
Sbjct: 234 ASWITGVTLVVDGGRCVG 251

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  186 bits (475), Expect = 1e-58
 Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 5/246 (2%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRH 61
             LQGK A++ GA+ GIG A A   A  GA V+I D  +E    + + +     +A    
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV DE  V   +  A+E +G+LDI+ +NAG+      +  +    +DR I  NL G+  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFN 119

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            V+ A   M+  +  G I+  +S +   G  G   Y+ +K G++G  ++ A EL   GI 
Sbjct: 120 VVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGIT 178

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V+P  + T  + G   +V+  + K   L  +  + + VA A  FLASD ++Y++G  
Sbjct: 179 VNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLG-QPEEVANAVAFLASDAASYITGQV 237

Query: 242 LVVDGG 247
           + V+GG
Sbjct: 238 IPVNGG 243

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  178 bits (454), Expect = 1e-55
 Identities = 87/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGPE--KASYRH 61
           +L GKVAI+ GA+ GIG A A+L A+ GA V+IA DI +E   +++  I  E   A    
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVK 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E+ VE  V   +EK+G +DI+ +NAG++   G + D+   ++DR I  NL G ++
Sbjct: 62  ADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +YA   M+  K  G I+  +S    +G S    Y+ SK  +    ++ A EL   GIR
Sbjct: 121 LTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIR 179

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V+P  + T     + ++ +          G + K + +A+  LFLASD+++Y++G  
Sbjct: 180 VNAVAPGAIDTE-MWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQI 238

Query: 242 LVVDGGFTA 250
           + VDGG+T 
Sbjct: 239 ITVDGGWTC 247

Length = 247

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  176 bits (448), Expect = 1e-54
 Identities = 90/249 (36%), Positives = 128/249 (51%), Gaps = 5/249 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+GKVAI+ G A G+G A A+L    GA V+++DI DE G    + +G + A + H DV
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELG-DAARFFHLDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            DE      V  A E +G LD++ +NAG+    GT+    + ++ R +  NL G  +  +
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGILTG-GTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH--GIRV 182
                M      GSII  +S    VG     AY  SK  + GL +SAA E      GIRV
Sbjct: 120 AVIPPM-KEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRV 178

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           N V P  + TP +   +              G   +   +A A ++LASDES++V+G +L
Sbjct: 179 NSVHPGYIYTPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFVTGSEL 238

Query: 243 VVDGGFTAV 251
           VVDGG+TA 
Sbjct: 239 VVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  176 bits (448), Expect = 1e-54
 Identities = 106/254 (41%), Positives = 150/254 (59%), Gaps = 9/254 (3%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIGPE--KASYR 60
            RL GKVAII GA+SGIG A AKLFA  GA V++ A  Q EL +Q+V+ I  E  +A   
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL-DQLVAEIRAEGGEAVAL 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DVRDE   +  VA A+E++G LDI ++NAG  G +G + ++ +  +  T+ATNL  + 
Sbjct: 61  AGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAF 120

Query: 121 MAVKYAARVMVANKIRGSIICTTS-TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +  K+    M+A    GS+I T++    T G  G  AY  SK GL+GL +  A+E G  G
Sbjct: 121 LGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQG 179

Query: 180 IRVNCVSPFGVATPFSAGTINDVE--GFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVN + P G  TP      +  E   FV  +  LK +  + + +A+AALFLASD +++V
Sbjct: 180 IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMA-QPEEIAQAALFLASDAASFV 238

Query: 238 SGHDLVVDGGFTAV 251
           +G  L+VDGG +  
Sbjct: 239 TGTALLVDGGVSIT 252

Length = 254

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  175 bits (445), Expect = 4e-54
 Identities = 94/259 (36%), Positives = 134/259 (51%), Gaps = 15/259 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+GKVA++ GAASGIG   A   A+ GA V+IAD+ DE       ++     KA     
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV DE+ +   + YA+E +G +DI+ +NAG+   V  I D    ++ + IA  L G+ + 
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K A  +M A    G II   S    VG +G  AY  +KHGL+GL +  A E   HG+ V
Sbjct: 120 TKAALPIMKAQGG-GRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178

Query: 183 NCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLK---------AKHVAEAALFLAS 231
           N + P  V TP     I D   E  + +   L+ ++L           + +A+ ALFLAS
Sbjct: 179 NAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS 238

Query: 232 DESAYVSGHDLVVDGGFTA 250
             +  V+G   VVDGG+TA
Sbjct: 239 FAAKGVTGQAWVVDGGWTA 257

Length = 258

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  174 bits (443), Expect = 6e-54
 Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 13/254 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELG----NQVVSSIGPEKASY 59
            L GKVA++ GA+SGIG A A+  A  GA  V+ A   +E         +   G  +A+ 
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 60  RHCDVRD-EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              DV D E+ VE  VA A E++G +DI+ +NAG+AGP   + +L    +DR I  NL G
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           + +  + A  +M     +  I+  +S A   G  G  AY  SK  L+GL ++ A EL   
Sbjct: 122 AFLLTRAALPLM----KKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLASD-ESA 235
           GIRVN V+P  + TP +A   +     + ++A     G +   + VA A  FLASD  ++
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS 237

Query: 236 YVSGHDLVVDGGFT 249
           Y++G  L VDGG  
Sbjct: 238 YITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  171 bits (436), Expect = 8e-53
 Identities = 91/252 (36%), Positives = 125/252 (49%), Gaps = 13/252 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+G+VA++ GAA GIG A A   A  GA VI+ DI  +        +     KA  R  
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DVRD   ++  VA  +E +G LDI+ +NAG+        ++D  Q++R I  NL G+ + 
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPL-TPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 123 VKYAARVMVANKIRGSIICTTSTA-STVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            + A   ++     G I+ T+S A   VG  G   Y  SK GL+G  R+ A EL    I 
Sbjct: 122 TQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNIT 180

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
           VN V P GV TP       ++       A    I L      + +A A LFLASDE+ Y+
Sbjct: 181 VNSVHPGGVDTP----MAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYI 236

Query: 238 SGHDLVVDGGFT 249
           +G  L VDGG T
Sbjct: 237 TGQTLPVDGGAT 248

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  168 bits (428), Expect = 1e-51
 Identities = 87/254 (34%), Positives = 130/254 (51%), Gaps = 12/254 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G   ++ G ASGIG A A+ FAE GA V + D+ +       + +   K +    DV 
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVA 68

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  QVE     A+E++G LD++ +NAG+AGP G I ++   Q+++T+A NL G     + 
Sbjct: 69  DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARA 128

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A  ++ A+   G II  +S A  +G  G   Y  SK  ++GLV+S A ELG  GIRVN +
Sbjct: 129 AVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAI 188

Query: 186 SPFGVATPFSAGTIND-----------VEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
            P  V  P     I             +E    +  +L  +V + + +A  ALFLAS  +
Sbjct: 189 LPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMV-EPEDIAATALFLASPAA 247

Query: 235 AYVSGHDLVVDGGF 248
            Y++G  + VDG  
Sbjct: 248 RYITGQAISVDGNV 261

Length = 264

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  162 bits (413), Expect = 2e-49
 Identities = 92/245 (37%), Positives = 128/245 (52%), Gaps = 3/245 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L GKVA++ G ASGIG A A+LFA  GA V + D   E   +V + +    A    CDV
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-SEDVAEVAAQLLGGNAKGLVCDV 70

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D + VE  VA  I  +G +DI+ ++AGVA  +    D+    +D+TI  NL GS +  +
Sbjct: 71  SDSQSVEAAVAAVISAFGRIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
              R M+A    G I+   S A  V      AY  SK G++G+ +  A E G +GI VN 
Sbjct: 130 AVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNA 188

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           +SP  V T          +G   K     G     + +A AALFLASD +A ++G +LV+
Sbjct: 189 ISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVI 248

Query: 245 DGGFT 249
           DGG+T
Sbjct: 249 DGGYT 253

Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  161 bits (410), Expect = 6e-49
 Identities = 84/253 (33%), Positives = 136/253 (53%), Gaps = 15/253 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYR 60
           L+GKVA++ GA+SGIG+A A   A  GA V++      D  +E+  ++ +  G  KA   
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGG--KAIAV 58

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV  E+ V      AI+++G+LDI+ +NAG+ G   +  ++ +  +++ I  NL G  
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSH-EMTLEDWNKVIDVNLTGQF 117

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  + A +    +KI+G II  +S    +   G   Y  SK G+  + ++ A E    GI
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGI 177

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLK----GIVLKAKHVAEAALFLASDESAY 236
           RVN ++P  + TP +A   +D E    +   L     G + + + +A AA +LASDE++Y
Sbjct: 178 RVNAIAPGAINTPINAEAWDDPEQ---RADLLSLIPMGRIGEPEEIAAAAAWLASDEASY 234

Query: 237 VSGHDLVVDGGFT 249
           V+G  L VDGG T
Sbjct: 235 VTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  160 bits (407), Expect = 3e-48
 Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 12/263 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
           RL+ KVA+I GA++GIG+A+A   A+ GA+V+  DI + + ++ V  I     KA   H 
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAV-SETVDKIKSNGGKAKAYHV 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+ DE+QV++  +   E++G +D++++NAGV    G I +  +  FD+ +A ++ G+ + 
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K    +M+     GSII T+S +          Y  +K  ++   +S A E G+ GIR 
Sbjct: 122 TKMLLPLMMEQG--GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRA 179

Query: 183 NCVSPFGVATPFS---AGTINDVEGFVCKVANL----KGIVLKAKHVAEAALFLASDESA 235
           N ++P  + TP      GT  D  G   +         G + K + VA+  +FLASD+S+
Sbjct: 180 NAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS 239

Query: 236 YVSGHDLVVDGGFTAVTNVMSML 258
           +++G  + +DGG  A T    ML
Sbjct: 240 FITGETIRIDGGVMAYTWPGEML 262

Length = 272

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  159 bits (403), Expect = 6e-48
 Identities = 93/256 (36%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKA 57
           MS     GKVA++ G A+GIG ATA  FA  GA V++AD     G + V+ I   G E A
Sbjct: 1   MSM-TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE-A 58

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
            +  CDV  + +V+  V   I  YG LD  ++NAG+    G + +   A+FD  +  N+ 
Sbjct: 59  LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVK 118

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G  + +KY   +M+A    G+I+ T S A          Y  SKH ++GL +SAA E  K
Sbjct: 119 GVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAK 177

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESA 235
            GIRVN V P  + T                 A +   G + K + VA A L+L SD ++
Sbjct: 178 KGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGAS 237

Query: 236 YVSGHDLVVDGGFTAV 251
           + +GH L+VDGG TA 
Sbjct: 238 FTTGHALMVDGGATAQ 253

Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  159 bits (403), Expect = 6e-48
 Identities = 86/258 (33%), Positives = 126/258 (48%), Gaps = 25/258 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L+GKVA++ GA+ GIG   A   AE GA ++I    +E   +    I  E  +A+   CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V DE+ ++  V    E +G +DI+ +NAG+        +   A++   I  NL G     
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAE-EFPEAEWRDVIDVNLNGVFFVS 121

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +  AR M+     G II   S  S +GG    AY  SK G+ GL ++ A+E  +HGI+VN
Sbjct: 122 QAVARHMIKQG-HGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 184 CVSPFGVATPFSAGTINDVE--GFVCK---------VANLKGIVLKAKHVAEAALFLASD 232
            ++P   AT  +   + D E    + K           +L G          AA+FLASD
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVG----------AAVFLASD 230

Query: 233 ESAYVSGHDLVVDGGFTA 250
            S YV+G  + VDGG+ A
Sbjct: 231 ASDYVNGQIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  158 bits (403), Expect = 6e-48
 Identities = 90/255 (35%), Positives = 125/255 (49%), Gaps = 16/255 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRH 61
            L+GKVA++ GA+ GIG A A+  A  GA V+I     E G   +V+ IG    KA    
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D + VE  V  A  ++G +DI+ +NAG+      ++ +    +DR I TNL G   
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             K  AR M+  +  G II  +S    +G  G   Y  SK G++G  +S A EL   GI 
Sbjct: 121 LTKAVARPMMKQRS-GRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGIT 179

Query: 182 VNCVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
           VN V+P  + T    A   +  E        L  I L      + +A A  FLASDE+AY
Sbjct: 180 VNAVAPGFIETDMTDALPEDVKEAI------LAQIPLGRLGQPEEIASAVAFLASDEAAY 233

Query: 237 VSGHDLVVDGGFTAV 251
           ++G  L V+GG    
Sbjct: 234 ITGQTLHVNGGMVMG 248

Length = 248

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  166 bits (422), Expect = 3e-47
 Identities = 92/263 (34%), Positives = 127/263 (48%), Gaps = 18/263 (6%)

Query: 1   MSKPR-LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY 59
           M KP+ L GKVA++ GAA GIG+ATAK  A  GA V++AD+ +E      + +G    + 
Sbjct: 414 MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRAL 473

Query: 60  R-HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CDV DE  V+     A   +G +DI+ SNAG+A   G I +     + R+   N  G
Sbjct: 474 GVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATG 532

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
             +  + A R+M A  + GSI+   S  +   G    AY  +K   L LVR  A ELG  
Sbjct: 533 HFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPD 592

Query: 179 GIRVNCVSPFGV---ATPFSAGTIN--------DVEGFVCKVAN---LKGIVLKAKHVAE 224
           GIRVN V+P  V   +  ++   I           E           LK  V   + VAE
Sbjct: 593 GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT-PEDVAE 651

Query: 225 AALFLASDESAYVSGHDLVVDGG 247
           A +FLAS   +  +G  + VDGG
Sbjct: 652 AVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  157 bits (398), Expect = 3e-47
 Identities = 93/248 (37%), Positives = 138/248 (55%), Gaps = 8/248 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVAI+ GA +GIG A A   A  GA V++ADI       VV+ I     + R  DV 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR-VDVT 59

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DE+QV      A+E++G LD++ +NAG       I+D D+A +D+T+A NL G+ +  ++
Sbjct: 60  DEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRH 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           AA  M+A    GSI+  +S A   G  G  AY  SK  +  L R+ A+EL   GIR N +
Sbjct: 120 AAPRMIARG-GGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNAL 178

Query: 186 SPFGVATPFSAGTINDVE------GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           +P  + TP     +   E      GF   +  L+G + + + VA A +FL SD++++++G
Sbjct: 179 APGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFITG 238

Query: 240 HDLVVDGG 247
             L VDGG
Sbjct: 239 QVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  156 bits (397), Expect = 4e-47
 Identities = 98/252 (38%), Positives = 135/252 (53%), Gaps = 8/252 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-GPEKASYRHCD 63
           RL G+VAI+ GA SGIG ATAKLFA  GA V++AD   E   +V ++I    +A  R  D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V   + VE  V +   ++G LD++ +NAG  G  GT++  D A +D  +  N+ G  +  
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGF-GCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           KYA  +M      GSI+ T S  +  GG G  AY  SK  +  L R+ A +    GIRVN
Sbjct: 121 KYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAYVS 238
            V+P  + TP+                 L+          A+ VA+AALFLASDES++ +
Sbjct: 180 AVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFAT 239

Query: 239 GHDLVVDGGFTA 250
           G  LVVDGG+ A
Sbjct: 240 GTTLVVDGGWLA 251

Length = 252

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  153 bits (389), Expect = 8e-46
 Identities = 86/254 (33%), Positives = 129/254 (50%), Gaps = 16/254 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL G+VA+I G  SGIG ATA+  A  GA V++ DI  E G      +G     +   DV
Sbjct: 4   RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAV 123
            DE  V      A E YGS+DI ++NAG++ P   +IL+  +  + R    NL    +  
Sbjct: 61  TDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCC 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGKHGIRV 182
           K A   MV    +GSII T S  + +G +    +YT SK G+L + R    +  + GIRV
Sbjct: 121 KAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRV 179

Query: 183 NCVSPFGVATP-----FSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAY 236
           N + P  V TP     F+     D E    ++ ++  G   + + +A A  FLASD++++
Sbjct: 180 NALCPGPVNTPLLQELFAK----DPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASF 235

Query: 237 VSGHDLVVDGGFTA 250
           ++    +VDGG + 
Sbjct: 236 ITASTFLVDGGISG 249

Length = 255

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  152 bits (386), Expect = 2e-45
 Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 13/245 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEKASYRHCDVRD 66
           KVA++ GA+ GIG A A   A  GA V + D  +E   + V  I      A+    DV D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
            + VE  V     ++G +DI+ +NAG+      ++ +    +D  I  NL G     +  
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRD-NLLMRMSEEDWDAVINVNLTGVFNVTQAV 119

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            R M+  +  G II  +S    +G  G   Y  SK G++G  +S A EL   GI VN V+
Sbjct: 120 IRAMIKRR-SGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 187 PFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHDL 242
           P  + T  +      V     K   LK I L      + VA A  FLASD+++Y++G  L
Sbjct: 179 PGFIDTDMTDALPEKV-----KEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVL 233

Query: 243 VVDGG 247
            V+GG
Sbjct: 234 HVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  148 bits (376), Expect = 8e-44
 Identities = 90/257 (35%), Positives = 125/257 (48%), Gaps = 17/257 (6%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVR 65
           GK A++ GAASGIG A A+  A  GA V++ D  +E         G       Y   DV 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            E ++ + +A A  ++G LDI+ +NAG+   V  I +     +DR IA  L  +   ++ 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   M      G II   S    V      AY  +KHGL+GL +  A E+ +HGI VN +
Sbjct: 120 ALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAI 178

Query: 186 SPFGVATPFSAGTIND--------VEGFVCKVANLKGIVLKA----KHVAEAALFLASDE 233
            P  V TP     I D         E  + +V  LKG   K       VAE AL+LASD 
Sbjct: 179 CPGYVRTPLVEKQIADQAKTRGIPEEQVIREVM-LKGQPTKRFVTVDEVAETALYLASDA 237

Query: 234 SAYVSGHDLVVDGGFTA 250
           +A ++G  +V+DGG+TA
Sbjct: 238 AAQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 2e-43
 Identities = 89/266 (33%), Positives = 127/266 (47%), Gaps = 25/266 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RLQGKVA++ GAASGIGEA A+ +   GA V+IADI+          IGP  A     DV
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP-AAIAVSLDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             +  ++  VA A+E++G +DI+++NA +   +  ILD+    +DR  A N+ G    ++
Sbjct: 62  TRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR MV     G II   S A   G +    Y  +K  ++   +SAA  L +HGI VN 
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNA 180

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK--------------GIVLKAKHVAEAALFLA 230
           ++P  V TP        V+    +  N                G +     +   ALFLA
Sbjct: 181 IAPGVVDTPMWDQ----VDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA 236

Query: 231 SDESAYVSGHDLVVDGGFTAVTNVMS 256
           S ++ Y+      VDGG     N MS
Sbjct: 237 SADADYIVAQTYNVDGG-----NWMS 257

Length = 257

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  146 bits (370), Expect = 5e-43
 Identities = 89/251 (35%), Positives = 128/251 (50%), Gaps = 15/251 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+GKVAI+ GA SG GE  A+ FA+ GA V+IADI  +   +V + IG E A     DV
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIG-EAAIAIQADV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
                VE  V  A+ K+G LDI+ +NAG+      +L++D  +FDR  A N    V ++ 
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVN----VKSIY 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGS---GPHAYTISKHGLLGLVRSAASELGKHGIR 181
            +A+ +V +          + AST G     G   Y  SK  ++   ++ A EL    IR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 182 VNCVSPFGVATPF-----SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           VNC+ P    TP         T  +   F   +    G +     +A AAL+LASDE+++
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAKFRATIP--LGRLSTPDDIANAALYLASDEASF 234

Query: 237 VSGHDLVVDGG 247
           ++G  L VDGG
Sbjct: 235 ITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  146 bits (371), Expect = 5e-43
 Identities = 91/265 (34%), Positives = 124/265 (46%), Gaps = 25/265 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---------- 55
           L+GKVA I GAA G G A A   A  GA +I  D+   L +     +             
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                K   R  DVRD  +V   V   +E++G LD++ +NAGV    G   +L   Q+D 
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLS-YGRSWELSEEQWDT 119

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            +  NL G     K     M+     GSII T+S A      G   Y  +KHGL+GL ++
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179

Query: 171 AASELGKHGIRVNCVSPFGVATPFSA--------GTINDVEGFVCKVANLKGIVLKAKHV 222
            A+EL ++GIRVN + P+ V TP  A            +          + G V   + V
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFV-PPEDV 238

Query: 223 AEAALFLASDESAYVSGHDLVVDGG 247
           A+A L+LASDES Y++GH L VD G
Sbjct: 239 ADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  146 bits (369), Expect = 8e-43
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVV-SSIGPEKASYR 60
           L GKVAII G++SGIG  TA LFA  GA + +    A+  +E     + + +  +K    
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+ +E+  +  ++  + K+G LDI+ +NAG+    G   D D+ ++D+ +  NL   +
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAK-GGGEDQDIEEYDKVMNLNLRAVI 119

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              K A   ++  K  G I+  +S A      G   Y ISK  L    R  A EL   G+
Sbjct: 120 YLTKLAVPHLIKTK--GEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

Query: 181 RVNCVSPFGVATPF--SAGTI-NDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDESA 235
           RVN VSP  + T F    G        F+   K  +  G       VAEA  FLASD S+
Sbjct: 178 RVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASS 237

Query: 236 YVSGHDLVVDGGFTAV 251
           +++G  L VDGG   +
Sbjct: 238 FITGQLLPVDGGRHLM 253

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  143 bits (364), Expect = 3e-42
 Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 14/244 (5%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDE 67
           A++ GA+ GIG A A   A+ GA VII     +E   +VV  +     KA    CDV D 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           + V+  V    E+ G +DI+ +NAG+      ++ +    +D  I TNL G     +   
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRD-NLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
           R+M+  +  G II  +S    +G +G   Y  SK G++G  +S A EL    I VN V+P
Sbjct: 120 RIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

Query: 188 FGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHDLV 243
             + T  +      V     K   L  I L      + VA A  FLASDE++Y++G  + 
Sbjct: 179 GFIDTDMTDKLSEKV-----KKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIH 233

Query: 244 VDGG 247
           VDGG
Sbjct: 234 VDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 5e-42
 Identities = 94/259 (36%), Positives = 132/259 (50%), Gaps = 19/259 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEKASYR 60
            +L GK A+I GA  GIGE  A++FA HGA +I+ DI     +L +++    G    +  
Sbjct: 2   GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGR-GHRCTAVV 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DVRD   V   +  A EK G +DI+ +NAGV   +G+ LD+     D  I  N+ G  
Sbjct: 61  -ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVW 118

Query: 121 MAVKYAARVMVANKIRGSIICTTS-TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
              K     M+A K  G I+  +S T   V   G  AY ++K  ++GL +S A E  + G
Sbjct: 119 NVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSG 177

Query: 180 IRVNCVSPFGVATPFSAGTI-----NDVEGFVCKVANLKGIVLK----AKHVAEAALFLA 230
           IRVN + P  V TP +          D E  + ++A  K I L+       V E A FLA
Sbjct: 178 IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA--KAIPLRRLADPLEVGELAAFLA 235

Query: 231 SDESAYVSGHDLVVDGGFT 249
           SDES+Y++G   V+DGG T
Sbjct: 236 SDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  143 bits (363), Expect = 6e-42
 Identities = 81/255 (31%), Positives = 125/255 (49%), Gaps = 8/255 (3%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KA 57
           +    L+GKVAI+ G + GIG A A+  AE GA V I         +    +  +   K 
Sbjct: 1   LDLFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKT 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               CDV  ++ VE+T     + +G +DI+ +NAG+       LD    Q+++ I  NL 
Sbjct: 61  KAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKP-ALDYTYEQWNKVIDVNLN 119

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASEL 175
           G     + AA++      +GS+I T S + T+        AY  SK  ++ L +S A E 
Sbjct: 120 GVFNCAQAAAKIFKKQG-KGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEW 178

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            K+ IRVN +SP  + T  +     ++         LK I L  + +  A L+LASD S+
Sbjct: 179 AKYFIRVNSISPGYIDTDLTDFVDKELRKKWESYIPLKRIAL-PEELVGAYLYLASDASS 237

Query: 236 YVSGHDLVVDGGFTA 250
           Y +G DL++DGG+T 
Sbjct: 238 YTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  143 bits (362), Expect = 1e-41
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 8/251 (3%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
             L GKVAI+ G A+ IG A A+     GA V I DI  + G  V +S+G E+A +   D
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG-ERARFIATD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + D+  +E  VA  + ++G +DI+ + A      G  L    A +   +  NL  + M  
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLACTYLDDG--LASSRADWLAALDVNLVSAAMLA 118

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + A   +      G+I+  TS ++    +G   Y  SK  +  L RS A +L   GIRVN
Sbjct: 119 QAAHPHLARGG--GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVN 176

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVA---NLKGIVLKAKHVAEAALFLASDESAYVSGH 240
            VSP    +               +VA   +L G V   + VA+   FL SD +++V+G 
Sbjct: 177 SVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA 236

Query: 241 DLVVDGGFTAV 251
           D  VDGG++A+
Sbjct: 237 DYAVDGGYSAL 247

Length = 261

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  141 bits (359), Expect = 2e-41
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 14/252 (5%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASY 59
              L G+VA++ GAA G+G A A   A  GA V++    DE   + +         +A  
Sbjct: 1   MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQA 60

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV D+  +E  VA A+E++G +DI+ +NAG+      + D+   ++D  I  NL+G 
Sbjct: 61  VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED-KPLADMSDDEWDEVIDVNLSGV 119

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
              ++     M   +  G I+  +S A   G  G   Y  +K GL+GL ++ A EL ++G
Sbjct: 120 FHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
           I VN V+P  + T     TI +        A      L      + +A A  FL SD S 
Sbjct: 179 ITVNMVAPGDIDTDMKEATIEEAR-----EAKDAETPLGRSGTPEDIARAVAFLCSDASD 233

Query: 236 YVSGHDLVVDGG 247
           Y++G  + V GG
Sbjct: 234 YITGQVIEVTGG 245

Length = 249

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  141 bits (358), Expect = 4e-41
 Identities = 85/261 (32%), Positives = 128/261 (49%), Gaps = 17/261 (6%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR-- 60
             RL GKVA++ GAA GIG A A+ FA  GA V +AD+   L  +  ++I  + A  R  
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVL 61

Query: 61  --HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV---AGPVGTILDLDMAQFDRTIATN 115
               DV D   V   VA A E +G LD++ +NAG+   A P    L +    + R  A +
Sbjct: 62  AVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP----LAMTDEDWRRCFAVD 117

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L G+    +     MV    RGSI+   ST +     G   Y ++KHGLLGL R+   E 
Sbjct: 118 LDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEY 176

Query: 176 GKHGIRVNCVSPFGVATPFSAGTIN---DVEGFVCKVANLK--GIVLKAKHVAEAALFLA 230
               +RVN ++P  + T  +    N   D      +   L+    + + + VA  A+FLA
Sbjct: 177 AARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLA 236

Query: 231 SDESAYVSGHDLVVDGGFTAV 251
           SDE+ +++   + +DGG + +
Sbjct: 237 SDEAPFINATCITIDGGRSVL 257

Length = 260

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  138 bits (350), Expect = 5e-40
 Identities = 85/255 (33%), Positives = 127/255 (49%), Gaps = 21/255 (8%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-GPEKASYRHCDVRD 66
           GKVA++ G ASGIG A AK  A  GA V++ADI  E+  +V  +  G  +A    CDV  
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
           E QV+     A+ ++G LDI+ SNAG+A     I +  +  ++R++  NL G  +  + A
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIA-TSSPIAETSLEDWNRSMDINLTGHFLVSREA 119

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            R+M +  I G+I+   S  +   G    AY+ +K     L R  A E G+ GIRVN V+
Sbjct: 120 FRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVN 179

Query: 187 PFGVATPFSAGTIND--------------VEGFVCKVANLKGIVLKAKHVAEAALFLASD 232
           P  V   F    I +               E +  +  NL    +  + VAEA + +AS+
Sbjct: 180 PDAV---FRGSKIWEGVWRAARAKAYGLLEEEY--RTRNLLKREVLPEDVAEAVVAMASE 234

Query: 233 ESAYVSGHDLVVDGG 247
           +    +G  + VDGG
Sbjct: 235 DFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  143 bits (363), Expect = 1e-39
 Identities = 88/250 (35%), Positives = 127/250 (50%), Gaps = 8/250 (3%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           Q +V ++ GAA GIG A  + FA  G  V++AD   E   +   S+GP+  +    DV D
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALA-MDVSD 62

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT-ILDLDMAQFDRTIATNLAGSVMAVKY 125
           E Q+ E       ++G +D++ +NAGV  P  T  LD  + +F R  A NL G+ +  + 
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A R+M+      +I+   S A  V      AY+ SK  ++ L RS A E    GIRVN V
Sbjct: 123 ALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAV 182

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHD 241
            P  V T   A       G +   A    I L    + + +AEA  FLASD+++Y++G  
Sbjct: 183 LPGYVRTQMVAELER--AGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGST 240

Query: 242 LVVDGGFTAV 251
           LVVDGG+T  
Sbjct: 241 LVVDGGWTVY 250

Length = 520

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  134 bits (340), Expect = 2e-38
 Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 15/252 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ----VVSSIGPEKASYRHCDV 64
           +VAI+  + SGIG+A A L A+ G  + I    DE G +     V S G  +A  R  D+
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D  +  + +   I++ G +D++ +NAG A      LD+D  ++ +    ++ G+ +  +
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAG-AMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AAR MV     G II  TS        G  AYT +KH L GL ++ A EL +HGI VN 
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNA 180

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           V+P  +ATP     +N ++    K  +  GI L        +A    +L S+ ++Y +G 
Sbjct: 181 VAPGAIATP-----MNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ 235

Query: 241 DLVVDGGFTAVT 252
            L+VDGGF    
Sbjct: 236 SLIVDGGFMLAN 247

Length = 256

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 2e-38
 Identities = 86/252 (34%), Positives = 129/252 (51%), Gaps = 12/252 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L GK+A++ GA+ GIGEA AKL A+ GA VI++  + +    V  +I     KA    C 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + + +Q++   A+  E++G LDI+ +NA      G ILD D+  F +T+  N+ G     
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
             A ++M      GSI+   S      G     Y+I+K  ++ + ++ A E    GIRVN
Sbjct: 126 VEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVN 184

Query: 184 CVSPFGVATPF-SAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
            + P    T F SA   ND    + K A L  I L+       +A A L+LASD S+Y +
Sbjct: 185 ALLPGLTDTKFASALFKNDA---ILKQA-LAHIPLRRHAEPSEMAGAVLYLASDASSYTT 240

Query: 239 GHDLVVDGGFTA 250
           G  L VDGG+ +
Sbjct: 241 GECLNVDGGYLS 252

Length = 252

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  133 bits (336), Expect = 8e-38
 Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 14/253 (5%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KASYRHCDV 64
            KVAII GAA GIG A A+  A  G  +++AD+  +E     +  I      A     DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D+  VE  +  A+EK+GS D+M +NAG+A P+  +L +      +  A N+ G +  ++
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIA-PITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AAR        G II  +S A   G     AY+ SK  + GL ++AA EL   GI VN 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 185 VSPFGVATPF---------SAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDES 234
            +P  V T                 + EGF    +++  G + + + VA    FLAS++S
Sbjct: 181 YAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDS 240

Query: 235 AYVSGHDLVVDGG 247
            Y++G  ++VDGG
Sbjct: 241 DYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  132 bits (334), Expect = 8e-38
 Identities = 84/249 (33%), Positives = 125/249 (50%), Gaps = 15/249 (6%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
            GKVA+I  AA GIG A A  FA  GA VI  DI +E   + +          R  DV D
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEK-LKELERGPGITT--RVLDVTD 57

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
           ++QV         + G +D++++ AG     G+ILD +   +D  +  N+    + +K  
Sbjct: 58  KEQVAALAK----EEGRIDVLFNCAGFV-HHGSILDCEDDDWDFAMNLNVRSMYLMIKAV 112

Query: 127 ARVMVANKIRGSIICTTSTASTVGG-SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
              M+A K  GSII  +S AS++ G      Y+ +K  ++GL +S A++  + GIR N +
Sbjct: 113 LPKMLARK-DGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAI 171

Query: 186 SPFGVATPFSAGTINDV----EGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGH 240
            P  V TP     I       E      A    G +   + VA  A++LASDESAYV+G 
Sbjct: 172 CPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTGT 231

Query: 241 DLVVDGGFT 249
            +V+DGG++
Sbjct: 232 AVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  132 bits (334), Expect = 1e-37
 Identities = 82/251 (32%), Positives = 120/251 (47%), Gaps = 13/251 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           KVA++ G A GIG+  A+  A+ G  V +AD+ +E   +    I     KA     DV D
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
           + QV   +  A EK+G  D+M +NAGVA P+  IL++   +  +    N+ G +  ++ A
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
           AR        G II   S A   G     AY+ +K  + GL ++AA EL   GI VN   
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 187 PFGVATPFSAGT------INDVE---GFVCKVANLK-GIVLKAKHVAEAALFLASDESAY 236
           P  V TP           I       GF    + +  G   + + VA    FLAS++S Y
Sbjct: 180 PGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY 239

Query: 237 VSGHDLVVDGG 247
           ++G  ++VDGG
Sbjct: 240 ITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  132 bits (333), Expect = 1e-37
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           GKVAI+ G   GIG+     F E G  V+ ADI +E G     + GP    + H DV DE
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPN-LFFVHGDVADE 59

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
             V+  V   +EK G +D++ +NA      G +  L + ++DR ++ NL G     +Y  
Sbjct: 60  TLVKFVVYAMLEKLGRIDVLVNNAARGSK-GILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             ++ NK  G II   ST +        AY  SK GL+ L  + A  LG   IRVNC+SP
Sbjct: 119 DELIKNK--GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISP 175

Query: 188 FGVAT----PFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
             + T     F+A  +   +       +  G V   K +A   LFL   ++ +++G   +
Sbjct: 176 GWINTTEQQEFTAAPLTQED----HAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFI 231

Query: 244 VDGGFT 249
           VDGG T
Sbjct: 232 VDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 87/258 (33%), Positives = 121/258 (46%), Gaps = 14/258 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L GK A++ GAASGIG+  A   A  GA V IAD+  +  N V   I     KA     D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V +E  V   +    E++GS+DI+ SNAG+   V  I +   A + +  A ++ G+ +  
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTT 123

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K A + M  +   G +I   S  S        AY  +KHGLLGL R  A E  KH +R +
Sbjct: 124 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 183

Query: 184 CVSPFGVATPFSAGTINDV--------EGFVCKV---ANLKGIVLKAKHVAEAALFLASD 232
            V P  V TP     I +         E  V KV     + G+    + VA+  LFL+S 
Sbjct: 184 VVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSF 243

Query: 233 ESAYVSGHDLVVDGGFTA 250
            SA ++G   VV  G+  
Sbjct: 244 PSAALTGQSFVVSHGWFM 261

Length = 262

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 3e-37
 Identities = 89/259 (34%), Positives = 127/259 (49%), Gaps = 32/259 (12%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSIGPEK 56
           RLQGK A+I G  SGIG  TA+ F   GA V I           + ELG   +  I  + 
Sbjct: 3   RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALV-IRADA 61

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIAT 114
                 DV  +K + + +A   E +G LD ++ NAGVA   P+    D D A FDR+  T
Sbjct: 62  G-----DVAAQKALAQALA---EAFGRLDAVFINAGVAKFAPLE---DWDEAMFDRSFNT 110

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           N+ G    ++  A + +      SI+   S  + +G      Y  SK  LL L ++ + E
Sbjct: 111 NVKGPYFLIQ--ALLPLLAN-PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGE 167

Query: 175 LGKHGIRVNCVSPFGVATP------FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
           L   GIRVN VSP  V TP          T++ V   +  +  L G     + +A+A L+
Sbjct: 168 LLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL-GRFGTPEEIAKAVLY 226

Query: 229 LASDESAYVSGHDLVVDGG 247
           LASDESA++ G +++VDGG
Sbjct: 227 LASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  130 bits (329), Expect = 4e-37
 Identities = 80/250 (32%), Positives = 115/250 (46%), Gaps = 21/250 (8%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
                K  +I GAASGIG A A+ F   GA V   D QD+          P+ +   H  
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK----------PDLSGNFHFL 50

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             D   + + +    +   S+DI+ + AG+      +LD  + ++     TNL  + +  
Sbjct: 51  QLD---LSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLT 107

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +     M+  K  G II   S AS V G G  AYT SKH L G  +  A +  K GI+V 
Sbjct: 108 RAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVF 166

Query: 184 CVSPFGVATPFSAGTINDVE--GFVCKVANLKGIV--LKAKHVAEAALFLASDESAYVSG 239
            ++P  V TP +A    D E  G    VA    I    + + VAE  LFLAS ++ Y+ G
Sbjct: 167 GIAPGAVKTPMTA---ADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQG 223

Query: 240 HDLVVDGGFT 249
             + +DGG+T
Sbjct: 224 TIVPIDGGWT 233

Length = 235

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  131 bits (332), Expect = 4e-37
 Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 17/252 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQDELGNQVVSSIGPEKASYRHC 62
           +L+GK A+I G  SGIG A A  FA  GA V I     +++   +    I  E    R C
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEG---RKC 79

Query: 63  -----DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D+ DE    + V   ++++G LDI+ +NA    P  +I D+   Q ++T  TN+ 
Sbjct: 80  LLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIF 139

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
                 K A   +   K   SII TTS  +  G      Y  +K  ++   R  + +L +
Sbjct: 140 SMFYLTKAALPHL---KKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAE 196

Query: 178 HGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            GIRVN V+P  + TP    +  +  V  F  +V  +      A+ VA A +FLAS +S+
Sbjct: 197 KGIRVNAVAPGPIWTPLIPSSFPEEKVSEFGSQVP-MGRAGQPAE-VAPAYVFLASQDSS 254

Query: 236 YVSGHDLVVDGG 247
           YV+G  L V+GG
Sbjct: 255 YVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 4e-37
 Identities = 72/243 (29%), Positives = 107/243 (44%), Gaps = 11/243 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            LQGKV  I G   G+G ATA   A  GA V +        +Q +  +  +       D+
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDL 63

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D +     V     ++G LD + + AG     GTI D D   +DR    N+  ++ A K
Sbjct: 64  VDPQAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A   + A+   G I+   + A+   G G  AY  +K G+  L  + A+EL   GI VN 
Sbjct: 123 AALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNA 181

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           V P  + TP +   + D        A+    V   + +A    FL SDE+  ++G  + V
Sbjct: 182 VLPSIIDTPPNRADMPD--------ADFSRWV-TPEQIAAVIAFLLSDEAQAITGASIPV 232

Query: 245 DGG 247
           DGG
Sbjct: 233 DGG 235

Length = 239

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  130 bits (328), Expect = 1e-36
 Identities = 81/250 (32%), Positives = 113/250 (45%), Gaps = 13/250 (5%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEK 68
            ++ GAA GIG A A+  AE GA V   D   E   ++V+ +       +    DV D  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            V+E V     +YG +D++ + AG+   +G I  L    +  T A N  G     +  + 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILR-LGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            M   +  G+I+   S A+ V   G  AY  SK  L  L +    EL  +GIR N VSP 
Sbjct: 120 RMKRRR-SGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPG 178

Query: 189 GVATPFSAGTINDVEGFVCKVANLK-----GIVLK----AKHVAEAALFLASDESAYVSG 239
              T       ND  G    +A        GI L        +A A LFLASD +++++ 
Sbjct: 179 STDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITM 238

Query: 240 HDLVVDGGFT 249
           HDLVVDGG T
Sbjct: 239 HDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  134 bits (340), Expect = 2e-36
 Identities = 85/248 (34%), Positives = 122/248 (49%), Gaps = 12/248 (4%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
            +V  I G A GIG A A  FA  G  ++I D   E   ++  ++G E  S +  D+ DE
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQ-ADITDE 327

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
             VE   A    ++G LD++ +NAG+A      L+     F R    NL+G+    + AA
Sbjct: 328 AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAA 387

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
           R+M      G I+   S AS +     +AY  SK  +  L RS A E    GIRVN V+P
Sbjct: 388 RLMSQG---GVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP 444

Query: 188 FGVATP-----FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
             + TP      ++G   D +    ++    G +   + VAEA  FLAS  ++YV+G  L
Sbjct: 445 GYIETPAVLALKASGRA-DFDSIRRRIP--LGRLGDPEEVAEAIAFLASPAASYVNGATL 501

Query: 243 VVDGGFTA 250
            VDGG+TA
Sbjct: 502 TVDGGWTA 509

Length = 520

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  129 bits (326), Expect = 2e-36
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 33/262 (12%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---CD 63
           + K+ +I GAA  IG+A  K     GA +I+ADI      Q+   +     +       D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV--GTILDLDMAQFDRTIATNLAGSVM 121
           +  ++ ++E +   +EK+G +DI+ +NA  +  V      +    Q++  +  NL G+ +
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPH-------------AYTISKHGLLGLV 168
             +   ++      +GSII   + AS  G   P               Y++ K G++ L 
Sbjct: 121 CSQAFIKLFKKQG-KGSII---NIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLT 176

Query: 169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN---LKGIVLKAKHVAEA 225
           +  A      GIRVN +SP G+         N    F+ K      LK + L  + +  A
Sbjct: 177 KYLAKYYADTGIRVNAISPGGILN-------NQPSEFLEKYTKKCPLKRM-LNPEDLRGA 228

Query: 226 ALFLASDESAYVSGHDLVVDGG 247
            +FL SD S+YV+G +LV+DGG
Sbjct: 229 IIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  129 bits (325), Expect = 2e-36
 Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 12/253 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPE-KASYRH 61
            + KV +I G  SG+G ATA   A+ GA + + D+ +   E     +  I P+ +     
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV DE QVE  V   +E++G +D  ++NAG+ G      D    +FD+ ++ NL G   
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            ++   +VM      G I+ T S     G      Y  +KHG++GL R++A E G++GIR
Sbjct: 121 GLEKVLKVMREQGS-GMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIR 179

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-------KAKHVAEAALFLASDES 234
           +N ++P  + TP   G++  +     + A  + + +       + + VA    FL SD++
Sbjct: 180 INAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDA 239

Query: 235 AYVSGHDLVVDGG 247
            YV+   + +DGG
Sbjct: 240 GYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 2e-36
 Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRHCD 63
            +VA+++G    +G       AE G  V +ADI  E    V   I    G   A     D
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
              E+ V        E +G +D++  NAG+A     I D  +  FDR++  NL G  +  
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIA-KAAFITDFQLGDFDRSLQVNLVGYFLCA 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +  +R+M+ + I+G II   S +  VG      Y+ +K G +GL +S A +L ++GI V+
Sbjct: 121 REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH 180

Query: 184 CV-------SP-FGVATPFSAGTINDVEGFVCKVANLKGIVLKA----KHVAEAALFLAS 231
            +       SP F    P  A  +      V +   +  + LK     + V    LF AS
Sbjct: 181 SLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYY-IDKVPLKRGCDYQDVLNMLLFYAS 239

Query: 232 DESAYVSGHDLVVDGG 247
            +++Y +G  + V GG
Sbjct: 240 PKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  129 bits (325), Expect = 2e-36
 Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 17/258 (6%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE----KASYRHCD 63
           GKVA++ G+ SGIG   A+  A  GA +++    D    + V +        K  Y   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           +     +E+ VAYA  ++G +DI+ +NAG+   V  I D    ++D  IA NL+      
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQH-VAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + A   M   +  G II   S    V  +   AY  +KHG++GL +  A E    G+  N
Sbjct: 121 RLALPHMKK-QGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179

Query: 184 CVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVLK---------AKHVAEAALFLASD 232
            + P  V TP     I+ +  +  V +    + ++L+          + + + A+FLASD
Sbjct: 180 AICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASD 239

Query: 233 ESAYVSGHDLVVDGGFTA 250
            ++ ++G  + VDGG+TA
Sbjct: 240 AASQITGTAVSVDGGWTA 257

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  129 bits (325), Expect = 3e-36
 Identities = 80/259 (30%), Positives = 118/259 (45%), Gaps = 26/259 (10%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH-- 61
             L+ KVAI+ G + GIG+A      E G+ VI  DI++           P      +  
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE-----------PSYNDVDYFK 50

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV +++QV + + Y I KYG +DI+ +NAG+    G I  ++  ++DR I  N+ G  +
Sbjct: 51  VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFL 109

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             KY    M+    +G II   S  S        AY  SKH +LGL RS A +     IR
Sbjct: 110 MSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIR 167

Query: 182 VNCVSPFGVATPF--------SAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLAS 231
              V P  + TP                VE  + +   +     V K + VA    FLAS
Sbjct: 168 CVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLAS 227

Query: 232 DESAYVSGHDLVVDGGFTA 250
           D +++++G  + VDGG  A
Sbjct: 228 DLASFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  128 bits (324), Expect = 3e-36
 Identities = 80/252 (31%), Positives = 119/252 (47%), Gaps = 17/252 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI---GPEKASYRH 61
           L GKVA++ GA+ GIG A AK  A  GA V++          +VV+ I   G +  + + 
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQ- 59

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D  QV      A + +G +DI+ +NAGV      I +    +FDR    N  G+  
Sbjct: 60  ADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 122 AVKYAARVMVANKIRGSIICTTS--TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
            ++ AA+ +      G II  +S  TA+     G  AY  SK  +    R  A ELG  G
Sbjct: 119 VLQEAAKRLRDG---GRIINISSSLTAAYTPNYG--AYAGSKAAVEAFTRVLAKELGGRG 173

Query: 180 IRVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           I VN V+P  V T    +  T   VEG+     +  G + + + +A    FLAS +  +V
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEEAVEGY--AKMSPLGRLGEPEDIAPVVAFLASPDGRWV 231

Query: 238 SGHDLVVDGGFT 249
           +G  +  +GG+ 
Sbjct: 232 NGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 8e-36
 Identities = 78/252 (30%), Positives = 127/252 (50%), Gaps = 9/252 (3%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPEKASYR-- 60
             L+GKV +I G ++G+G A A  F +  A V+I    DE   N V   I  +KA     
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI--KKAGGEAI 60

Query: 61  --HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV  E  V   +  A++++G+LD+M +NAG+   V +  ++ +  +++ I TNL G
Sbjct: 61  AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPS-HEMSLEDWNKVINTNLTG 119

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           + +  + A +  V + I+G+II  +S    +       Y  SK G+  +  + A E    
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPK 179

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYV 237
           GIRVN + P  + TP +A    D +      + +  G + K + +A  A +LAS E++YV
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYV 239

Query: 238 SGHDLVVDGGFT 249
           +G  L  DGG T
Sbjct: 240 TGITLFADGGMT 251

Length = 261

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 1e-35
 Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 6/248 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L GK A++ GAA G+G A A+  AE GA V   D       ++ +++     +A     D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + D   V+     A    G LD + +NAG+     +  +LD+  +D  +  N+ G+ + +
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGIT-NSKSATELDIDTWDAVMNVNVRGTFLML 123

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + A   +  +  RG I+   S  +  G     AY  SK  ++G+ RS A ELG  GI VN
Sbjct: 124 RAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 184 CVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            ++P   AT   +    ++   +  K   L+ + +    VA A LFL SD + +V+G  L
Sbjct: 183 AIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDD-VAGAVLFLLSDAARFVTGQLL 241

Query: 243 VVDGGFTA 250
            V+GGF  
Sbjct: 242 PVNGGFVM 249

Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-35
 Identities = 86/251 (34%), Positives = 121/251 (48%), Gaps = 15/251 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
              GK  ++ GA+SGIG A A   A+ GA V+ A       +++    G E       DV
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL---DV 62

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D+      +  A+   G+ D + + AG+A  + + LD+    FDR +A N  G+ +  +
Sbjct: 63  GDD----AAIRAALAAAGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVAR 117

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           + AR M+A    GSI+  +S A+ VG     AY  SK  L  + R    ELG HGIRVN 
Sbjct: 118 HVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNS 177

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           V+P    TP +A   +D +        L  I L        VA   LFL SD ++ VSG 
Sbjct: 178 VNPTVTLTPMAAEAWSDPQK---SGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGV 234

Query: 241 DLVVDGGFTAV 251
            L VDGG+TA 
Sbjct: 235 SLPVDGGYTAR 245

Length = 245

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  126 bits (319), Expect = 2e-35
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHC 62
           L+GKVA I G  +GIG+A AK FAE GA V IA  + E+       I      +A    C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DVRD + VE  V   ++++G +DI+ +NA     +     L    F   I  +L G+   
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAA-GNFLAPAESLSPNGFKTVIDIDLNGTFNT 119

Query: 123 VKYAARVMVANKIRGSIICTTST--ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            K   + ++  K  GSI+  ++T   +        A   +K G+  L RS A E G +GI
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSA--AAKAGVDALTRSLAVEWGPYGI 177

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
           RVN ++P  + T  + G          +   ++ + L      + +A  ALFL SD ++Y
Sbjct: 178 RVNAIAPGPIPT--TEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAASY 235

Query: 237 VSGHDLVVDGG 247
           ++G  LVVDGG
Sbjct: 236 INGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  126 bits (319), Expect = 2e-35
 Identities = 68/201 (33%), Positives = 96/201 (47%), Gaps = 14/201 (6%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           G VA++ G ASG+G AT +     GA V+I D+ +  G  V      +   +   DV  E
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLG--DNCRFVPVDVTSE 59

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD------MAQFDRTIATNLAGSVM 121
           K V+  +A A  K+G LDI+ + AG+A       +        +  F R I  NL G+  
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIA-VAAKTYNKKGQQPHSLELFQRVINVNLIGTFN 118

Query: 122 AVKYAARVMVAN-----KIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
            ++ AA  M  N       RG II T S A+  G  G  AY+ SK G++G+    A +L 
Sbjct: 119 VIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLA 178

Query: 177 KHGIRVNCVSPFGVATPFSAG 197
             GIRV  ++P    TP  AG
Sbjct: 179 PQGIRVVTIAPGLFDTPLLAG 199

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  125 bits (317), Expect = 3e-35
 Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 8/193 (4%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKA--SYRH 61
           GK  +I G +SGIG+A AK   + GA VII        +E   ++ +         SY  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D ++VE+  A A+EK G  D++ + AG++ P G   DL   +F+R +  N  GS+ 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIP-GLFEDLTAEEFERGMDVNYFGSLN 119

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
                  +M   +  G I+  +S A+ VG  G  AY  SK  L GL  S   EL  + IR
Sbjct: 120 VAHAVLPLMKEQR-PGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 182 VNCVSPFGVATPF 194
           V+ V P    TP 
Sbjct: 179 VSVVYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  125 bits (317), Expect = 4e-35
 Identities = 80/230 (34%), Positives = 112/230 (48%), Gaps = 8/230 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L+GKVA+I GA+SGIGEATA+  AE GA V++A  ++E    +   IG   A     DV
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   VE  +    E++G +DI+ +NAG+A     + + D+  +DR I TN+ G +   +
Sbjct: 63  TDRAAVEAAIEALPEEFGRIDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNGTR 121

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                MV  K  G II   S A      G   Y  +K  +         EL   GIRV  
Sbjct: 122 AVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTV 180

Query: 185 VSPFGVATP-FSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLAS 231
           +SP  V T  FS  T+   EG   +   +   G  L  + +AEA LF A+
Sbjct: 181 ISPGLVETTEFS--TVRF-EGDDERADKVYKGGTALTPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  125 bits (315), Expect = 6e-35
 Identities = 82/248 (33%), Positives = 114/248 (45%), Gaps = 16/248 (6%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE--KASYRHCDVRDE 67
           A++ G + GIG+A A   AE GA V+I   +  +   +V + I     KA     DV   
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           + VEE  A   E++G LD++ SNA  AG    + +L  A +D  + TNL   V   + AA
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAA-AGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
           ++M      G I+  +S  S        A   +K  L  LVR  A ELG  GIRVN VSP
Sbjct: 120 KLMRERG-GGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSP 178

Query: 188 FGVAT------PFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
             + T      P     +              G V   + VA+A  FL SD +  ++G  
Sbjct: 179 GVIDTDALAHFPNREDLLEAAAA-----NTPAGRVGTPQDVADAVGFLCSDAARMITGQT 233

Query: 242 LVVDGGFT 249
           LVVDGG +
Sbjct: 234 LVVDGGLS 241

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 7e-35
 Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 5/248 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L G+VA++ G+A G+G   A+  A  GA V++           V+++      A     D
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + DE+ V    A    ++G LDI+ +N G A     + +LD A     + T+L   ++  
Sbjct: 69  IADEEAVAAAFARIDAEHGRLDILVNNVG-ARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + AA+ M      G II  TS A  V  +G   Y  +K GL GL+R+ A+E G HGI  N
Sbjct: 128 RLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSN 186

Query: 184 CVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            ++P   AT  +A    D   G         G   + + +A AA+FLAS  ++YV+GH L
Sbjct: 187 AIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVL 246

Query: 243 VVDGGFTA 250
            VDGG++ 
Sbjct: 247 AVDGGYSV 254

Length = 256

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 2e-34
 Identities = 77/249 (30%), Positives = 114/249 (45%), Gaps = 10/249 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ----DELGNQVVSSIGPE--KASY 59
           L  +  +I G + G+G A A   A  GA VI+ DI         + V + I     KA  
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DVRD       +   +E++G LDI+ +NAG+A       +L + ++D  I  NL G 
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIA-TDAAFAELSIEEWDDVIDVNLDGF 122

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               + A   M+  +  G I+   S A   G  G   Y  SK GL+GL ++ A+EL   G
Sbjct: 123 FNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRG 182

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           I VN V+P  + TP            +     ++  + +   VA    FL SD ++YV+G
Sbjct: 183 ITVNAVAPGAINTP--MADNAAPTEHLLNPVPVQ-RLGEPDEVAALVAFLVSDAASYVTG 239

Query: 240 HDLVVDGGF 248
             + VDGGF
Sbjct: 240 QVIPVDGGF 248

Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  129 bits (327), Expect = 3e-34
 Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 21/269 (7%)

Query: 1   MSKPR-LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPE 55
           M K + L  +VA + G A GIG  TA+  A  GA V++AD+  E    V + I    G  
Sbjct: 406 MPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAG 465

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +A     DV DE+ V+   A     YG +DI+ +NAG+A       +  + ++   +   
Sbjct: 466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS-SPFEETTLQEWQLNLDIL 524

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
             G  +  + A R M    + G+I+   S  +   G    AY+ +K     L R  A+E 
Sbjct: 525 ATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEG 584

Query: 176 GKHGIRVNCVSPFGV---ATPFSAG-----------TINDVEGFVCKVANLKGIVLKAKH 221
           G +GIRVN V+P  V   +  +                +++E    K   LK  +  A  
Sbjct: 585 GTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA-D 643

Query: 222 VAEAALFLASDESAYVSGHDLVVDGGFTA 250
           +AEA  FLAS +S   +G  + VDGG  A
Sbjct: 644 IAEAVFFLASSKSEKTTGCIITVDGGVPA 672

Length = 676

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 9e-34
 Identities = 81/258 (31%), Positives = 117/258 (45%), Gaps = 20/258 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           +L+GKVA+I G  SGIG A A LFA+ GA + I  + DE  +   +    EK     C  
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYL-DEHEDANETKQRVEKEG-VKCLL 100

Query: 63  ---DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV DE   ++ V   + + G LDI+ +NA    P  ++ D+   Q D+T  TN+   
Sbjct: 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSY 160

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               K A   +   K   +II T S     G      Y+ +K  +    RS A  L + G
Sbjct: 161 FHMTKAALPHL---KQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKG 217

Query: 180 IRVNCVSPFGVATP-----FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           IRVN V+P  + TP     F       V  F            + + +A A +FLAS +S
Sbjct: 218 IRVNAVAPGPIWTPLIPSDFDEE---KVSQFGSNTP--MQRPGQPEELAPAYVFLASPDS 272

Query: 235 AYVSGHDLVVDGGFTAVT 252
           +Y++G  L V+GG     
Sbjct: 273 SYITGQMLHVNGGVIVNG 290

Length = 290

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  122 bits (307), Expect = 1e-33
 Identities = 87/258 (33%), Positives = 126/258 (48%), Gaps = 23/258 (8%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
             P   G+VA++ GAA GIG   A      G  V++AD+  E G++V  ++G E A +  
Sbjct: 4   PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG-ENAWFIA 62

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-LDMAQFDRTIATNLAGSV 120
            DV DE QV   VA  + ++G LD +  NA +A P  T L+ L +A ++R +A NL G +
Sbjct: 63  MDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPM 122

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  K+ A  + A+   G+I+   ST +        AY  SK GLL L  + A  LG   I
Sbjct: 123 LLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-I 179

Query: 181 RVNCVSPFGV---------ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           RVN VSP  +         A P S               +  G V   + VA    +L S
Sbjct: 180 RVNAVSPGWIDARDPSQRRAEPLSEAD---------HAQHPAGRVGTVEDVAAMVAWLLS 230

Query: 232 DESAYVSGHDLVVDGGFT 249
            ++ +V+G + VVDGG T
Sbjct: 231 RQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 1e-33
 Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 16/253 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           R   KVAI+ GAA GIG+A A+  A  GA V++ADI  E   +V   I  +  +      
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSV 120
           DV D    +      +  +G +D + +NA + G   +  ++ +    + + ++ NL G++
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  +   + M      G+I+  +STA+ +  S    Y ++K GL GL +  A ELG   I
Sbjct: 123 VCTRAVYKHMAKRG-GGAIVNQSSTAAWL-YSNF--YGLAKVGLNGLTQQLARELGGMNI 178

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE----AALFLASDESAY 236
           RVN ++P  + T   A      + FV     +KGI L      E      LFL SDE+++
Sbjct: 179 RVNAIAPGPIDT--EATRTVTPKEFV--ADMVKGIPLSRMGTPEDLVGMCLFLLSDEASW 234

Query: 237 VSGHDLVVDGGFT 249
           ++G    VDGG  
Sbjct: 235 ITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  121 bits (305), Expect = 3e-33
 Identities = 75/253 (29%), Positives = 108/253 (42%), Gaps = 18/253 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
             GK   + GAA GIG A A  F E GA VI  D    L  +          +    DV 
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA-FLTQE------DYPFATFVLDVS 58

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   V +     + + G LD++ + AG+   +G    L    + +T A N  G+    + 
Sbjct: 59  DAAAVAQVCQRLLAETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRA 117

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
                   +  G+I+   S A+ V   G  AY  SK  L  L +    EL  +G+R N V
Sbjct: 118 VMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVV 176

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLK-----GIVL----KAKHVAEAALFLASDESAY 236
           SP    T        D +G    +A        GI L    + + +A A LFLASD +++
Sbjct: 177 SPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASH 236

Query: 237 VSGHDLVVDGGFT 249
           ++  D+VVDGG T
Sbjct: 237 ITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  120 bits (304), Expect = 3e-33
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKASYRHCDVRD 66
           KVAII G ASGIG ATAKL  + GA V I D  +  G   ++ +     KA++  CDV  
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM-AQFDRTIATNLAGSVMAVKY 125
            +Q+      AIEK+G +DI+ +NAG+      +    +   +++TI  NL G +     
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 126 AARVMVANKIR--GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL-GKHGIRV 182
           A   M  NK    G I+   S A          Y+ SKHG++G  RS A  L  K G+RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLASDES 234
           N + P    TP        +   V K A +         + VA+A ++L  D+ 
Sbjct: 181 NAICPGFTNTPL-------LPDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDDE 227

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 3e-33
 Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 19/256 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
            L+ KV I+ G ASGIG A +   AE GA  +I   +    ++    +   +        
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAEFVQV 62

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+ D+ Q  + V   + K+G +D + +NAGV   VG  L+     F  ++  NL    + 
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVASLERNLIHYYVM 120

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
             Y   +      RG+I+  +S  +  G  G   Y  +K   L L R  A  L K G+RV
Sbjct: 121 AHYC--LPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRV 178

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK---------AKHVAEAALFLASDE 233
           N V P  V TP     I     F    A L  I  K         A+ +A+ A+FL S+ 
Sbjct: 179 NAVIPAEVMTPLYENWIA---TFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER 235

Query: 234 SAYVSGHDLVVDGGFT 249
           S++ +G  L VDGG+ 
Sbjct: 236 SSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 5e-33
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 15/255 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN----QVVSSIGPEKASYR 60
            L G+VA + GA SGIG+  A   A+ GA V + D++ + G     + + + G  +A   
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG-RRAIQI 63

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV  +  +   VA    + G+L +  + AG+A       +++  Q+   +  NL G  
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPA-EEMEEEQWQTVMDINLTGVF 122

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSG---PHAYTISKHGLLGLVRSAASELGK 177
           ++ +  AR M+ N   GSI+   S +  +   G    H Y  SK G++ L +S A E   
Sbjct: 123 LSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAH-YNASKAGVIHLSKSLAMEWVG 180

Query: 178 HGIRVNCVSPFGVATPFS--AGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            GIRVN +SP   ATP +     ++  + F  +       + K   +   A+FL SD ++
Sbjct: 181 RGIRVNSISPGYTATPMNTRPEMVHQTKLF--EEQTPMQRMAKVDEMVGPAVFLLSDAAS 238

Query: 236 YVSGHDLVVDGGFTA 250
           + +G DL+VDGGF  
Sbjct: 239 FCTGVDLLVDGGFVC 253

Length = 254

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 6e-33
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 19/258 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           L+GK+A+I GA+ GIG A AK +A+ GA ++  DI  EL ++ ++    +G E   Y  C
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYV-C 66

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV DE  V+  V+   ++ G +DI+ +NAG+   +  +L++    F + I  +L    + 
Sbjct: 67  DVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNAPFIV 125

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K     M+  K  G II   S  S +G     AY  +K GL  L ++ ASE G+  I+ 
Sbjct: 126 SKAVIPSMI-KKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 184

Query: 183 NCVSPFGVATPFSA--------GTINDVEGFVCK--VANLKGIVLKAKHVAEAALFLASD 232
           N + P  +ATP +A        G+ +  + F+     A   G     + +A  A+FLASD
Sbjct: 185 NGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWG---DPEDLAGPAVFLASD 241

Query: 233 ESAYVSGHDLVVDGGFTA 250
            S +V+GH L VDGG  A
Sbjct: 242 ASNFVNGHILYVDGGILA 259

Length = 265

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  120 bits (301), Expect = 7e-33
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 20/256 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK A+I G+A GIG A A+ +   GA V IADI  E      + IGP  A     DV 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPA-ACAISLDVT 59

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D+  ++  VA  ++++GS+DI+ +NA     +  I+D+    +DR  A N++G++  ++ 
Sbjct: 60  DQASIDRCVAALVDRWGSIDILVNNAA-LFDLAPIVDITRESYDRLFAINVSGTLFMMQA 118

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            AR M+A    G II   S A   G +    Y  +K  ++ L +SA   L +HGI VN +
Sbjct: 119 VARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 178

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLK--------------GIVLKAKHVAEAALFLAS 231
           +P  V      G    V+    +  N                G + +A+ +   A+FLAS
Sbjct: 179 APGVVDGEHWDG----VDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234

Query: 232 DESAYVSGHDLVVDGG 247
            ++ Y+      VDGG
Sbjct: 235 TDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 1e-32
 Identities = 84/269 (31%), Positives = 116/269 (43%), Gaps = 36/269 (13%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           LQGK+ I+ G +SGIG A  K    +GA V+ ADI              E   +   DV 
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG-------GDGQHENYQFVPTDVS 59

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL----------DLDMAQFDRTIATN 115
             ++V  TVA  IEK+G +D + +NAG+  P   +L          +L+ A FD+    N
Sbjct: 60  SAEEVNHTVAEIIEKFGRIDGLVNNAGINIP--RLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
             G  +  +  AR MV     G I+  +S A   G  G   Y  +K  L    RS A EL
Sbjct: 118 QKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKEL 176

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFV----CKVANLK-----------GIVLKAK 220
           GKH IRV  V+P G+       T    E         V  L+           G   K  
Sbjct: 177 GKHNIRVVGVAP-GILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS 235

Query: 221 HVAEAALFLASDESAYVSGHDLVVDGGFT 249
            VA+   +L SD ++Y++G    + GG T
Sbjct: 236 EVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  119 bits (300), Expect = 1e-32
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 18/256 (7%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKAS--YRHCDVR 65
           GKVA++  A+SGIG A A+  A  GA V I     E   +  S +    A       D+ 
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D + ++  V  A + +G +DI+ +NAG   P G   +L    +       L   +  V+ 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYT--ISKHGLLGLVRSAASELGKHGIRVN 183
               M      G I+  +S   TV    P+     +++ GL+GLV++ + EL   G+ VN
Sbjct: 120 VLPGMKERG-WGRIVNISS--LTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVN 176

Query: 184 CVSPFGVATPFSAG---TINDVEGFVCKVANL---KGIVL----KAKHVAEAALFLASDE 233
            V P  + T           + EG   + A       I L    K + +A    FLAS++
Sbjct: 177 SVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEK 236

Query: 234 SAYVSGHDLVVDGGFT 249
           ++Y++G  ++VDGG T
Sbjct: 237 ASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 2e-32
 Identities = 66/195 (33%), Positives = 90/195 (46%), Gaps = 4/195 (2%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
             L+GKV  I G A GIG ATA+  A  GA V I D+ + L  +  + +G         D
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGL--VVGGPLD 58

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D       +       G +D++ +NAGV  PVG  LD   A   R +  N+ G ++  
Sbjct: 59  VTDPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGS 117

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K AA  MV    RG ++   S A  +   G   Y  SKH ++G   +A  EL   G+ V+
Sbjct: 118 KLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176

Query: 184 CVSPFGVATPFSAGT 198
            V P  V T   AGT
Sbjct: 177 VVLPSFVNTELIAGT 191

Length = 273

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  118 bits (298), Expect = 3e-32
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN---QVVSSIGPEKASYR 60
            R   KV I+ G + GIG    + F E+GA V+     +  G      ++  GP    + 
Sbjct: 5   LRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFV 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV  E+ ++  ++  +E++G +D + +NAG   P  T  +    +F   +  NL    
Sbjct: 65  PCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYF 124

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +A KYA   +   K +G+II  +S   ++G      Y  +K  +  + ++ A +  ++G+
Sbjct: 125 LASKYALPHL--RKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGV 182

Query: 181 RVNCVSPFGVATPF---SAGTINDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDESA 235
           RVNC+SP  + TP     A    D    +   ++A L G +        AALFLA+ E+ 
Sbjct: 183 RVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAA-EAT 241

Query: 236 YVSGHDLVVDGG 247
           + +G DL++ GG
Sbjct: 242 FCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 4e-32
 Identities = 86/264 (32%), Positives = 125/264 (47%), Gaps = 32/264 (12%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
           M    L GKVAI+ G  +G+G+  A   A+ GA +II           +++   G  K +
Sbjct: 8   MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEG-RKVT 66

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI-----LDLDMAQFDRTIA 113
           +   D+   +  E+ V  A+E++G +DI+ +NAG      TI     L+     ++  + 
Sbjct: 67  FVQVDLTKPESAEKVVKEALEEFGKIDILVNNAG------TIRRAPLLEYKDEDWNAVMD 120

Query: 114 TNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAAS 173
            NL       +  A+VM      G II   S  S  GG    AYT SKHG+ GL ++ A+
Sbjct: 121 INLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFAN 179

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN---LKGIVLKAKHVAE------ 224
           EL  + I+VN ++P  + T  +A    D      K  N   LK I   A    E      
Sbjct: 180 ELAAYNIQVNAIAPGYIKTANTAPIRAD------KNRNDEILKRI--PAGRWGEPDDLMG 231

Query: 225 AALFLASDESAYVSGHDLVVDGGF 248
           AA+FLAS  S YV+GH L VDGG+
Sbjct: 232 AAVFLASRASDYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 6e-32
 Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 24/261 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVS---SIGPEKASYR 60
            L GK A++ G + G+G   A+   E GA V++ A   +EL  +  +   ++G   A + 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEEL-EEAAAHLEALG-IDALWI 66

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAG 118
             DV DE  +E      +E++G +DI+ +NAG     P     D  +  +D+ +  N+ G
Sbjct: 67  AADVADEADIERLAEETLERFGHVDILVNNAGATWGAPA---EDHPVEAWDKVMNLNVRG 123

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGS----GPHAYTISKHGLLGLVRSAASE 174
             +  +  A+  +  +  G II   S A   G         AY  SK  ++   R+ A+E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI----VLKAKHVAEAALFLA 230
            G HGIRVN ++P    T  + GT+  +   +     L  +     LK      AAL LA
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKG-----AALLLA 238

Query: 231 SDESAYVSGHDLVVDGGFTAV 251
           SD S +++G  L VDGG +AV
Sbjct: 239 SDASKHITGQILAVDGGVSAV 259

Length = 259

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  117 bits (294), Expect = 1e-31
 Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 7/246 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
           RL GK AII GA +GIG+  A  FA  GA V+++DI  +  N VV  I     +A    C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+  E+++     +A+ K G +DI+ +NAG  GP     D+ MA F R    N+      
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFHL 125

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +  A  M  N   G I+  TS A+        +Y  SK     LVR+ A +LG+  IRV
Sbjct: 126 SQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 183 NCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           N ++P  + T      I  ++E  + +   ++ +  + + +A AALFL S  +++VSG  
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-QPQDIANAALFLCSPAASWVSGQI 243

Query: 242 LVVDGG 247
           L V GG
Sbjct: 244 LTVSGG 249

Length = 255

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  115 bits (289), Expect = 3e-31
 Identities = 70/192 (36%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           LQGK A+I GA  GIG A A   A+ G  V +    +E    V   +     K      D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D ++V   +     + GS+DI+ +NAG++   G  L+LD A++++ I  NL    M V
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNL----MGV 119

Query: 124 KYAARVMVANKIR---GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            YA R ++ + I    G II  +STA   G +   AY+ SK G+LGL  S   E+ KH I
Sbjct: 120 YYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNI 179

Query: 181 RVNCVSPFGVAT 192
           RV  ++P  VAT
Sbjct: 180 RVTALTPSTVAT 191

Length = 239

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  115 bits (290), Expect = 3e-31
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 19/255 (7%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS-----IGPEKASYRHCDVR 65
           A I GAA G+G A A+  AE GA V + DI D  G    ++      G   A     DV 
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DE Q +  +A A +  G L ++ +NAGV G  G I  +++ ++ R +A N+    +  K+
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC- 184
           A   + A++   SI+  +S A+        AY  SK  +  L +S A +  + G+ V C 
Sbjct: 121 ALPYLRASQP-ASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 185 -VSPFGVATPFSAGTINDVEGFVCKVANLK-------GIVLKAKHVAEAALFLASDESAY 236
            + P  + T          +    + A  K       G + +   VA A L+LASDES +
Sbjct: 180 SIHPTFIRTGIVDPI---FQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRF 236

Query: 237 VSGHDLVVDGGFTAV 251
           V+G +LV+DGG  A+
Sbjct: 237 VTGAELVIDGGICAM 251

Length = 251

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  115 bits (289), Expect = 5e-31
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 17/256 (6%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRHCD 63
             +VA+++G    +GE      AE G  V +ADI  E   +V   I  E   KA     D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             +E+ V        E +  +D++  +AG+A     I D ++  FDR++  NL G  +  
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIA-KSAKITDFELGDFDRSLQVNLVGYFLCA 119

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +  +++M+ + I+G II   S +  VG      Y+ +K G +GL +S A +L +HGI VN
Sbjct: 120 REFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVN 179

Query: 184 CV-------SP-FGVATPFSAGTINDVEGFVCKVANLKGIVLKA----KHVAEAALFLAS 231
            +       SP F    P  A  +   E  V +    K + LK     + V    LF AS
Sbjct: 180 SLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDK-VPLKRGCDYQDVLNMLLFYAS 238

Query: 232 DESAYVSGHDLVVDGG 247
            +++Y +G  + + GG
Sbjct: 239 PKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  113 bits (286), Expect = 1e-30
 Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 15/221 (6%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDE 67
           + +I G  SGIG   A  FA+ GA V+I DI ++   +  +++     K  Y  CDV   
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           ++V E      ++ G + I+ +NAGV      +L+L   + ++T   N        K   
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVV-SGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL---GKHGIRVNC 184
             M+     G I+   S A  +  +G   Y  SK   +G   S   EL   GK GI+   
Sbjct: 120 PDMLERN-HGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V P+ + T          +G       L  I L+ ++VAE 
Sbjct: 179 VCPYFINTGM-------FQGVKTPRPLLAPI-LEPEYVAEK 211

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 16/244 (6%)

Query: 6   LQGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQ----DELGNQVVSSIGPEKASYR 60
           L GKV ++  AA +GIG ATA+   E GA V+I+DI      E  +++ + +G  +    
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV  E QV+  +  A+E+ G LD++ +NAG+ G    ++D+   ++ R +   L G+ 
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQT-PVVDMTDDEWSRVLDVTLTGTF 133

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA---YTISKHGLLGLVRSAASELGK 177
            A + A R M A    G I+   + AS +G    H    Y  +K G++ L R +A E  +
Sbjct: 134 RATRAALRYMRARGHGGVIV---NNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAE 190

Query: 178 HGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           +G+R+N V+P     PF A   +   ++    + A   G   +   VA    FLASD S+
Sbjct: 191 YGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF--GRAAEPWEVANVIAFLASDYSS 248

Query: 236 YVSG 239
           Y++G
Sbjct: 249 YLTG 252

Length = 262

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 2e-30
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSIGPEKA 57
           L+GKVA+I G + GIG A A+     G  V I         +   EL N+          
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-------GNV 56

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                DVRDE  V+  V   +  +G LD++ +NAGV G    + +L   ++   I TNL 
Sbjct: 57  LGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAPVEELTPEEWRLVIDTNLT 115

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+   +K A   +      G II  +S A T   +G  AY  SK GL+G   +A  +L +
Sbjct: 116 GAFYTIKAAVPALKRGG--GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQ 173

Query: 178 HGIRVNCVSPFGVATPFSAGTIND 201
           +GI+V+ + P  VAT F+  T ++
Sbjct: 174 YGIKVSTIMPGSVATHFNGHTPSE 197

Length = 237

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 3e-30
 Identities = 78/243 (32%), Positives = 112/243 (46%), Gaps = 9/243 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G+V ++ G   GIG   A+ F   GA V++       G +   ++    A +   DVR
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHAADVR 57

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  QV   V   +E++G LD++ +NAG + P     +      ++ +  NL   ++  + 
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQA 116

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A  VM      GSI+   S +      G  AY  +K GLL L RS A E     +RVN V
Sbjct: 117 ANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAV 175

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
               V T  S     D EG     A +  G +     +A A LFLASD ++YVSG +L V
Sbjct: 176 VVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEV 235

Query: 245 DGG 247
            GG
Sbjct: 236 HGG 238

Length = 252

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 4e-30
 Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 7/251 (2%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           + A++ GAA GIG+A A+ F   G  V+  DI          ++G  +     CD+ D  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            +   +A A  + G +D++ +NAG A    ++ D   A +    A NL  + + V+    
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGAARAA-SLHDTTPASWRADNALNLEAAYLCVEAVLE 121

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            M+    RG+++   S  + +   G  AY+ +K GL+   +  A E G+ GIR N V+P 
Sbjct: 122 GMLKRS-RGAVVNIGSV-NGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG 179

Query: 189 GVATPF---SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
            V T            V   + K   L+        VA A LFLAS  +  ++G  L VD
Sbjct: 180 TVKTQAWEARVAANPQVFEELKKWYPLQDFA-TPDDVANAVLFLASPAARAITGVCLPVD 238

Query: 246 GGFTAVTNVMS 256
           GG TA    M+
Sbjct: 239 GGLTAGNREMA 249

Length = 257

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 7e-30
 Identities = 77/268 (28%), Positives = 115/268 (42%), Gaps = 37/268 (13%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD--------IQDELGNQVVSSIGPEK 56
            L G+VA+I G  SGIG A  + F   GA V + +        ++   G+ V+   G   
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG--- 59

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ----FDRTI 112
                 DV      +  V   ++ +G LD    NAG+     +++D+        FD   
Sbjct: 60  ------DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIF 113

Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-TVGGSGPHAYTISKHGLLGLVRSA 171
             N+ G ++  K A   + A+   GS+I T S +S   GG GP  YT SKH ++GLVR  
Sbjct: 114 NVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGP-LYTASKHAVVGLVRQL 170

Query: 172 ASELGKHGIRVNCVSPFGVATP--------FSAGTINDVEGFVCKVANLK--GIVLKAKH 221
           A EL    IRVN V+P G  T             +I+D  G    +A +       + + 
Sbjct: 171 AYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPED 229

Query: 222 VAEAALFLASDE-SAYVSGHDLVVDGGF 248
                + LAS   S  ++G  +  DGG 
Sbjct: 230 HTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 1e-29
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI--GPEKASYRH 61
           RL GKVA++ G   G+G A A+ FAE GA  ++I     E G    + +     KA +  
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D +     VA A E +G LD + + AG+    GTILD     FDR  A N+     
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR-GTILDTSPELFDRHFAVNVRAPFF 121

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            ++ A ++M   K  G+I+   S ++  G     AY  SK  L  L R+AA  L ++ IR
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIR 181

Query: 182 VNCVSPFGVATPFSAGTINDV----EGFVCKVANLK--GIVLKAKHVAEAALFLASDESA 235
           VN ++   +AT        +     + ++ K A  +  G +L    VA A  FL SDES 
Sbjct: 182 VNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG 241

Query: 236 YVSG 239
            ++G
Sbjct: 242 LMTG 245

Length = 260

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 1e-29
 Identities = 90/251 (35%), Positives = 129/251 (51%), Gaps = 13/251 (5%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKAS 58
             L  KVAI+ GA+ GIG A A+  A  G  V +     A   DEL  ++ ++ G  +A 
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG--RAI 58

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV D   V      A   +G +D++ +NAGV  P+GTI D D+  FDRTIATNL G
Sbjct: 59  AVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRG 117

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           + + ++ AAR +      G II  +++   +   G   Y  SK  + GLV   A+EL   
Sbjct: 118 AFVVLREAARHL---GQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGR 174

Query: 179 GIRVNCVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           GI VN V+P  VAT  F  G   +    +  +A L+ +    + +A A  FLA  + A+V
Sbjct: 175 GITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLG-TPEEIAAAVAFLAGPDGAWV 233

Query: 238 SGHDLVVDGGF 248
           +G  L V+GGF
Sbjct: 234 NGQVLRVNGGF 244

Length = 245

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (280), Expect = 1e-29
 Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 10/248 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           R +GKVA+I G   GIG A A+ F   GA V +     E   + +   G        CDV
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIK---CDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            +  QV+++     +++G +D++ +NAG+   +    + D  ++++ I  NL G++    
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIKINLNGAIY-TT 118

Query: 125 YAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           Y    ++     G+I+   S A       G   Y I+K G++ L R  A ELGK+GIRVN
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSG 239
            V+P  V T  +    +  E    +       VL    K + +A   LFLASD++ Y++G
Sbjct: 179 AVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITG 238

Query: 240 HDLVVDGG 247
             +V DGG
Sbjct: 239 QVIVADGG 246

Length = 255

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  111 bits (278), Expect = 2e-29
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDV 64
           L+GKVA++ GA +G+G+  A   AE GA ++ A   +     Q V ++G  +      D+
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALG-RRFLSLTADL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D + ++  V  A+E++G +DI+ +NAG+        +     +D  +  NL       +
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAE-EFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AA+  +     G II   S  S  GG    +YT SKH + GL +  A+E    GI VN 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK--------AKHVAEAALFLASDESAY 236
           ++P  +AT       N+ +           I+ +           +   A+FLAS  S Y
Sbjct: 181 IAPGYMAT-------NNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDY 233

Query: 237 VSGHDLVVDGGFTA 250
           V+G+ L VDGG+ A
Sbjct: 234 VNGYTLAVDGGWLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  110 bits (276), Expect = 3e-29
 Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 17/255 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L+ K AI+ G   GIG AT + FAE GA V + D+  E   +V + I  +   A    CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + D   V+  VA A +  G +D++ +NAG     G     +   ++R IA NL G++   
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAG-WDKFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
                 MV     G I+   S A+ VG SG   Y   K GL+   ++ A E  +HGI VN
Sbjct: 120 HAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK---------GIVLKAKHVAEAALFLASDES 234
            V P    T      ++D+ G       L+         G + +   +  A LF +SD++
Sbjct: 179 VVCPGPTDTAL----LDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDA 234

Query: 235 AYVSGHDLVVDGGFT 249
           ++++G  L V GG T
Sbjct: 235 SFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  110 bits (276), Expect = 3e-29
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 13/193 (6%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVI-----IADIQDELGNQVVSSIGPEKASYRHCD 63
           KV +I G +SGIG A A   A  G  VI        ++        +    E       D
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE------LD 54

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V DE+ ++  V   IE++G +D++ +NAG     G + +  + +       N+ G +   
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVNNAGYGL-FGPLEETSIEEVRELFEVNVFGPLRVT 113

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +    +M      G I+  +S A  V       Y  SK  L  L  S   EL   GI+V 
Sbjct: 114 RAFLPLMRKQG-SGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVT 172

Query: 184 CVSPFGVATPFSA 196
            + P  V T F+ 
Sbjct: 173 IIEPGPVRTGFAD 185

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  110 bits (276), Expect = 4e-29
 Identities = 80/256 (31%), Positives = 112/256 (43%), Gaps = 21/256 (8%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVR 65
            KVA++ GA  GIG A AK   E G  V I D  +E        +     KA     DV 
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  QV   V   ++ +G L+++ +NAGV  P   I  +   QFD+    N+ G +  ++ 
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGV-APTTPIETITEEQFDKVYNINVGGVIWGIQA 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A          G II  TS A  VG      Y+ +K  + GL ++AA +L   GI VN  
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAY 180

Query: 186 SPFGVATPFSAGTINDVEGFVCKVAN----------LKGIVLK----AKHVAEAALFLAS 231
           +P  V TP       D+   V + A            K I L      + VA    FLA 
Sbjct: 181 APGIVKTPMMF----DIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAG 236

Query: 232 DESAYVSGHDLVVDGG 247
            +S Y++G  ++VDGG
Sbjct: 237 PDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  109 bits (275), Expect = 4e-29
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 8/247 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           +V ++ GA+ G+G A A+ FA  GA V++   +     + V++   E+A     DVRD  
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPV-----GTILDLDMAQFDRTIATNLAGSVMAV 123
           QV+  +  A   +G +D + +NA +  P       T   +D   + + +   + G++  +
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLL 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +            G +I   +          H YT +K  LLG  R+ A ELG +GI VN
Sbjct: 121 QAVLPDFKERG-SGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 184 CVSPFGV-ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            VS   +  T  SA T  +V   + +   L G V   + +A+A LF AS  +  V+G +L
Sbjct: 180 MVSGGLLKVTDASAATPKEVFDAIAQTTPL-GKVTTPQDIADAVLFFASPWARAVTGQNL 238

Query: 243 VVDGGFT 249
           VVDGG  
Sbjct: 239 VVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  109 bits (273), Expect = 9e-29
 Identities = 77/240 (32%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDE 67
           VAI+ G A+GIG+A A   A+ GA V+IAD++ E    V ++I     +A    C+V  E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           + +E  V   + ++G + I+ +NAG  GP    + +    F+     NL  +    +  A
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             M      G+I+  +S +S        AY  SK  +  + R+ A +LG  GIRVN V+P
Sbjct: 121 PHMQKAG-GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 188 FGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
             V T   A  +              G + + + +A AALFL S  SA+VSG  L V GG
Sbjct: 180 GAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  108 bits (272), Expect = 1e-28
 Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 16/248 (6%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
            I+ GAA GIG A A+   + GA VI  D+   L  +    +          DV D   V
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL-----DVADAAAV 55

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
            E  +  + ++G +D + + AGV  P G    L    +++T A N+ G    ++  A  M
Sbjct: 56  REVCSRLLAEHGPIDALVNCAGVLRP-GATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHM 114

Query: 131 VANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV 190
              +  G+I+   S A+ V      AY  SK  L  L +    EL  +G+R N VSP   
Sbjct: 115 KDRR-TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGST 173

Query: 191 ATPFSAGTINDVEGFVCKVANLK-----GIVL----KAKHVAEAALFLASDESAYVSGHD 241
            T       +D +G    +A +      GI L    +   +A A LFLASD++ +++ HD
Sbjct: 174 DTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMHD 233

Query: 242 LVVDGGFT 249
           LVVDGG T
Sbjct: 234 LVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  107 bits (270), Expect = 3e-28
 Identities = 84/250 (33%), Positives = 118/250 (47%), Gaps = 16/250 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRHCDV 64
             GK A++ GA  GIG AT K  A+ GA V+ ++  Q +L + V    G E       D+
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVC---VDL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D    EE    A+   G +D++ +NA VA  +   L++    FDR+   N+   +   +
Sbjct: 62  SDWDATEE----ALGSVGPVDLLVNNAAVA-ILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR M+A  + GSI+  +S AS    +    Y  +K  L  L +  A ELG H IRVN 
Sbjct: 117 IVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNS 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           V+P  V T       +D E        L  I L      + V  A LFL SD+S+  +G 
Sbjct: 177 VNPTVVMTDMGRDNWSDPEK---AKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGS 233

Query: 241 DLVVDGGFTA 250
            L VDGGF A
Sbjct: 234 TLPVDGGFLA 243

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 3e-27
 Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 14/220 (6%)

Query: 13  IMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEE 72
           I GAASGIG ATA LFA  G  V   DI +     + + +G   A     DV D    + 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDA 65

Query: 73  TVA-YAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV 131
            +A +A    G LD++++NAG+    G   D+ +   DR I  N+ G V+   +AA   +
Sbjct: 66  ALADFAAATGGRLDVLFNNAGI-LRGGPFEDIPLEAHDRVIDINVKG-VLNGAHAALPYL 123

Query: 132 ANKIRGSIICTTSTASTVGGSGPHA--YTISKHGLLGLVRSAASELGKHGIRVNCVSPFG 189
                G+ +  TS+AS + G  P    Y+ +K  + GL  +   E  +HGIRV  V P  
Sbjct: 124 K-ATPGARVINTSSASAIYGQ-PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181

Query: 190 VATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAAL 227
           V T    GT N+V        + K  G+ L  + VAEA  
Sbjct: 182 VDTAMLDGTSNEV-----DAGSTKRLGVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  105 bits (263), Expect = 4e-27
 Identities = 81/257 (31%), Positives = 113/257 (43%), Gaps = 18/257 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L+G+VA+I G  SG+G A  + F   GA V + D   E   ++ +  G +       DV
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFG-DAVVGVEGDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGV----AGPVGTILDLDMAQFDRTIATNLAGSV 120
           R     E  VA  +E++G LD    NAG+       V    +     FD     N+ G +
Sbjct: 60  RSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYI 119

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  K A   + A    GS+I T S A    G G   YT SKH ++GLV+  A EL  H I
Sbjct: 120 LGAKAALPALYAT--EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-I 176

Query: 181 RVNCVSPFGVAT----PFSAGTINDVEGFVCKVANLKGI-----VLKAKHVAEAALFLAS 231
           RVN V+P G+ T    P S G              LK I       + +    A +FLAS
Sbjct: 177 RVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLAS 236

Query: 232 -DESAYVSGHDLVVDGG 247
             ++   +G  +  DGG
Sbjct: 237 RGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  104 bits (260), Expect = 5e-27
 Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
           LQGKVA++ GA+SGIGEATA+  A  GA V IA    D  + L +++ +  G  KA    
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGG--KALVLE 58

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV DE+QV+  V   +E  G LDI+ +NAG+   +G + D D   + R I TNL G +M
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGI-MLLGPVEDADTTDWTRMIDTNLLG-LM 116

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
              +AA      + +G+I+  +S A  V       Y  +K G+         E+ + G+R
Sbjct: 117 YTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVR 176

Query: 182 VNCVSPFGVATPF 194
           V  + P  V T  
Sbjct: 177 VVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  104 bits (262), Expect = 6e-27
 Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC--- 62
           L+GK  +I GA   IG A  K   E G  VI ADI  E  N+++ S+G E  S +     
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 63  -DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-----TILDLDMAQFDRTIATNL 116
            D+ D++ +EE ++ + EKYG +D   +    A P          D+ +  F+  ++ +L
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNC---AYPRNKDYGKKFFDVSLDDFNENLSLHL 118

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTS--------------TASTVGGSGPHAYTISKH 162
             S +  +  A+        G+++  +S              T+ T     P  Y   K 
Sbjct: 119 GSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTS----PVEYAAIKA 173

Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA---NLKGIVLKA 219
           G++ L +  A       IRVNCVSP G+         N  E F+       N KG+ L  
Sbjct: 174 GIIHLTKYLAKYFKDSNIRVNCVSPGGILD-------NQPEAFLNAYKKCCNGKGM-LDP 225

Query: 220 KHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             +    +FL SD+S Y++G +++VD GF+
Sbjct: 226 DDICGTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  104 bits (261), Expect = 6e-27
 Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 14/250 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           L  KVA++  +  GIG A A+  A+ GA V+++  + +  ++ V+++  E  S     C 
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCH 67

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V   +  E  VA A+  +G +DI+ SNA V    G ILD     +D+ +  N+  + +  
Sbjct: 68  VGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMT 127

Query: 124 KYAARVMVANKIR----GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           K      V  ++     GS++  +S A+     G   Y +SK  LLGL ++ A EL    
Sbjct: 128 K-----AVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRN 182

Query: 180 IRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVNC++P  + T FS+    D  VE  + +   ++ +  + +  A    FL S++++Y+
Sbjct: 183 IRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLG-QPEDCAGIVSFLCSEDASYI 241

Query: 238 SGHDLVVDGG 247
           +G  +VV GG
Sbjct: 242 TGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  104 bits (261), Expect = 7e-27
 Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 17/256 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYR 60
           RL G+ A+I GA+ GIG A A+ F   GA V+I    AD   +  +++       +    
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI----LDLDMAQFDRTIATNL 116
             DV D++     + +  + +  L I+ +NAG     G I    +D    ++     TNL
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAG-----GNIRKAAIDYTEDEWRGIFETNL 120

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
             S   +   A  ++      +I+   S +          Y ++K  LL + R+ A E  
Sbjct: 121 F-SAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDES 234
           + GIRVN V+P+ + TP ++G ++D + +  V +   ++ +  + + VA A  FL    +
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVG-EPEEVAAAVAFLCMPAA 238

Query: 235 AYVSGHDLVVDGGFTA 250
           +Y++G  + VDGGF  
Sbjct: 239 SYITGQCIAVDGGFLR 254

Length = 257

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 2e-26
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 4/206 (1%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASY 59
                L GKV ++ GAA GIG   A+     GA + + D+++     + + +G  ++   
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLT 61

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV D   ++     A+E++G +D++ +NAG+A   G++  +D   F R I  NL G 
Sbjct: 62  VVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGV 120

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
              V+     ++    RG ++  +S A+     G  AY  SK G+     +   E+  HG
Sbjct: 121 FHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGF 205
           + V       + T        D+  F
Sbjct: 179 VTVGSAYLSWIDTDLVRDADADLPAF 204

Length = 296

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  103 bits (259), Expect = 2e-26
 Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 20/231 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSIGPEKA 57
           ++GK A+I GA+SGIG   AK  A  G  +I+          +  EL ++        + 
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-----GVEV 58

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D+ D + +E       E+ G +D++ +NAG     G  L+L + + +  I  N+ 
Sbjct: 59  EVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTF-GPFLELSLDEEEEMIQLNIL 117

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
                 K     MV     G II   S A  +       Y+ +K  +L    +   EL  
Sbjct: 118 ALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKG 176

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
            G++V  V P    T F     +DV            +VL  + VAEAAL 
Sbjct: 177 TGVKVTAVCPGPTRTEFFDAKGSDVYLLS-----PGELVLSPEDVAEAALK 222

Length = 265

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 3e-26
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 4/177 (2%)

Query: 13  IMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDEKQV 70
           I GAASG+G A A  +A  G  + +AD+ +E G + +  +        Y+ CDVRD  Q+
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
                   EK+G +D++ +NAGVA   G   +L +  +D  IA NL G V   K    + 
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGVASG-GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLF 123

Query: 131 VANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
              K  G I+   S A  + G    +Y ++K G++ L  +   EL    I V+ V P
Sbjct: 124 KRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  102 bits (254), Expect = 5e-26
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 7/248 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEKASYRHCD 63
           L GK A+I GA++GIG+  A  + E GA V IA    +   ++   I     K     CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V   +QV   +     + G +DI   NAG+   V  +LD+ + +F R   TN+ G  +  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHA--YTISKHGLLGLVRSAASELGKHGIR 181
           + AA+ MV     G II T S +  +         Y  SK  ++ L ++ A EL  H IR
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIR 185

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN VSP  + T            +  K+    G + + + +A   L+LAS+ S+Y++G D
Sbjct: 186 VNSVSPGYILTELVEPYTEYQPLWEPKIP--LGRLGRPEELAGLYLYLASEASSYMTGSD 243

Query: 242 LVVDGGFT 249
           +V+DGG+T
Sbjct: 244 IVIDGGYT 251

Length = 253

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 6e-26
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 11/252 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHC 62
           RL  +VA++ GA  G+G A A  FAE GA V+IA   +   ++V   I     +A     
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+   +        A+E +G LDI+ +N G   P   +L             N+A +   
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMP-NPLLSTSTKDLADAFTFNVATAHAL 125

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
              A  +M+ +   GS+I  +ST   + G G  AY  +K  L    R AA +L    IRV
Sbjct: 126 TVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-IRV 184

Query: 183 NCVSPFGVATPFSAGTI----NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           N ++P  + T  SA  +    +++   + K   L+ +    + +A AA++LAS   +Y++
Sbjct: 185 NAIAPGSILT--SALEVVAANDELRAPMEKATPLRRLG-DPEDIAAAAVYLASPAGSYLT 241

Query: 239 GHDLVVDGGFTA 250
           G  L VDGG T 
Sbjct: 242 GKTLEVDGGLTF 253

Length = 263

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 23/259 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           ++  +  ++ G + G+G A A+ FA  GA V++   Q E   + ++    ++A     DV
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADV 61

Query: 65  RDEKQVEETVAYAIEKYGS-LDIMYSNA-------GVAGPVGTILDLDMAQFDRTIATNL 116
            D +QV+   A A E +G  +  + +NA       G A       D+    F + +  ++
Sbjct: 62  TDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARK--KADDITWEDFQQQLEGSV 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP----HAYTISKHGLLGLVRSAA 172
            G++  ++ A   M      G II       T     P    H YT +K  LLGL R+ A
Sbjct: 120 KGALNTIQAALPGMREQG-FGRII----NIGTNLFQNPVVPYHDYTTAKAALLGLTRNLA 174

Query: 173 SELGKHGIRVNCVSPFGV--ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
           +ELG +GI VN VS  G+   T  SA T ++V   +     L+  V   +  A+A LF A
Sbjct: 175 AELGPYGITVNMVSG-GLLRTTDASAATPDEVFDLIAATTPLRK-VTTPQEFADAVLFFA 232

Query: 231 SDESAYVSGHDLVVDGGFT 249
           S  +  V+G +LVVDGG  
Sbjct: 233 SPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 1e-25
 Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L GK  +I G+A GIG   A   AE+GA +II DI  E     V+ +  E  KA     +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSVM 121
           V  +++VE  + +  +  G +D++ +NAG+    P     +    +++  IA N     +
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHP---FTEFPEQEWNDVIAVNQTAVFL 123

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +  AR MV  +  G II   S  S +G      Y  SK  +  L R    EL +H I+
Sbjct: 124 VSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQ 182

Query: 182 VNCVSPFGVATPFSAGTINDVE--GFVCK--VANLKGIVLKAKHVAEAALFLASDESAYV 237
           VN ++P    T  +   + D     ++CK   A   G     + +  AA+FL+S  S +V
Sbjct: 183 VNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWG---DPQELIGAAVFLSSKASDFV 239

Query: 238 SGHDLVVDGGFTA 250
           +GH L VDGG   
Sbjct: 240 NGHLLFVDGGMLV 252

Length = 254

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  100 bits (252), Expect = 1e-25
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 20/257 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+GK A++ G   GIG A  +  A  GA V       +  ++ ++    +  K     C
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 63  DVRDEKQVEETVAYAIEKYGS-LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           DV    + +E +      +G  L+I+ +NAG         D     +   ++TN   +  
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAK-DYTEEDYSLIMSTNFEAAYH 121

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A  ++ A+   G+I+  +S A  +       Y  +K  L  L RS A E  K  IR
Sbjct: 122 LSRLAHPLLKASG-NGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA--------KHVAEAALFLASDE 233
           VN V+P+ +ATP     I   E       NL  ++ +         + VA    FL    
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKE-------NLDKVIERTPLKRFGEPEEVAALVAFLCMPA 233

Query: 234 SAYVSGHDLVVDGGFTA 250
           ++Y++G  + VDGG TA
Sbjct: 234 ASYITGQIIAVDGGLTA 250

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 2e-25
 Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 4/188 (2%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVR 65
           K   + GAASGIG ATA   A  GA + + D   +   Q V+     G     +R  D+ 
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   V    A     +GS+D++ + AG++   GT+  L   Q+ R +  NL G +  ++ 
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIET 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               MVA    G ++  +S A  V      AY+ SK GL GL      +L +HGI V+ V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179

Query: 186 SPFGVATP 193
            P  V TP
Sbjct: 180 VPGAVKTP 187

Length = 272

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 99.5 bits (248), Expect = 3e-25
 Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 15/221 (6%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           K A++ GA+ GIGEATA+L    G  V I   +DE      ++   E       DVRDE 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICA-RDEARLAAAAAQELEGVLGLAGDVRDEA 59

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            V   V    E +G LD + +NAGV G +  + +L   ++   + TNL G+   +  AA 
Sbjct: 60  DVRRAVDAMEEAFGGLDALVNNAGV-GVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            ++  +  G+I+   S A      G  AY  SK GLLGL  +A  +L +  IRV  V P 
Sbjct: 119 ALLR-RGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPG 177

Query: 189 GVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL 229
            V T F+                     L  + VA+A LF 
Sbjct: 178 SVDTGFAGSPEGQ------------AWKLAPEDVAQAVLFA 206

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 28/260 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+ KV +I G A G+G A A+  A+ GA + + D+  E   + V+  G    +      
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA----------GPVGTILDLDMAQFDRTI 112
           +V DE+ VE T A   E +G L+ + +NAG+           G V + + L   QF   I
Sbjct: 62  NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSL--EQFQSVI 119

Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA 172
             NL G  +  + AA  M+ +  +G II   S+ +  G  G   Y+ SK G+  +  + A
Sbjct: 120 DVNLTGVFLCGREAAAKMIESGSKGVII-NISSIARAGNMGQTNYSASKAGVAAMTVTWA 178

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLK----AKHVAEAAL 227
            EL ++GIRV  ++P  + T  +A    + +E         K I +      + +A    
Sbjct: 179 KELARYGIRVAAIAPGVIETEMTAAMKPEALERLE------KMIPVGRLGEPEEIAHTVR 232

Query: 228 FLASDESAYVSGHDLVVDGG 247
           F+   E+ YV+G  L +DGG
Sbjct: 233 FII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 98.5 bits (246), Expect = 8e-25
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 28/259 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ---------VVSSIGPE 55
           R  G+V ++ GA  G+G A A  FAE GA V++ D+  +             VV  I   
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 56  --KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
             KA   +  V D +++ +T   AI+ +G +DI+ +NAG+     +   +    +D  + 
Sbjct: 62  GGKAVANYDSVEDGEKIVKT---AIDAFGRVDILVNNAGILRDR-SFAKMSEEDWDLVMR 117

Query: 114 TNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAAS 173
            +L GS    + A   M   K  G II T+S A   G  G   Y+ +K GLLGL  + A 
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQK-FGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAI 176

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           E  K+ I  N ++P    +  +   + + + F           LK ++VA   L+L  + 
Sbjct: 177 EGAKYNITCNTIAP-AAGSRMTETVMPE-DLFD---------ALKPEYVAPLVLYLCHES 225

Query: 234 SAYVSGHDLVVDGGFTAVT 252
              V+G    V  G+    
Sbjct: 226 CE-VTGGLFEVGAGWIGKL 243

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 99.1 bits (247), Expect = 9e-25
 Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 23/269 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEKASYRHCD 63
           L+ KVA+I G    +G A A+  A+ GA V       E G++V   I     +A     D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI-------------LDLDMAQFDR 110
           V D   +E      + ++G++DI+ + AG   P  T               DLD   ++ 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
               NL GS +  +   + M   +  GSII  +S  +    +   AY+ +K  +    + 
Sbjct: 123 VFDLNLNGSFLPSQVFGKDM-LEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQW 181

Query: 171 AASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL------KGIVLKAKHVAE 224
            A E    G+RVN ++P    TP +   + + +G     +N        G   K + +  
Sbjct: 182 LAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEELLG 241

Query: 225 AALFLASDE-SAYVSGHDLVVDGGFTAVT 252
           A LFLAS++ S++V+G  + VDGGF+A +
Sbjct: 242 ALLFLASEKASSFVTGVVIPVDGGFSAYS 270

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 1e-24
 Identities = 79/260 (30%), Positives = 119/260 (45%), Gaps = 29/260 (11%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC--D 63
           L G+ A++ G++ GIG A A+  A+ GA VI+             S+  +  S      D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSVM 121
           V D   V   +     + G +DI+ +NAG+    P+    D     F+R + TN++    
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLE---DFPADAFERLLRTNISSVFY 124

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +  AR M+A +  G II   S  S +   G   YT +K  +  L +  A++  KHG++
Sbjct: 125 VGQAVARHMIA-RGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQ 183

Query: 182 VNCVSPFGVATPFSAGTINDVE-----------GFVCKVANLKGIVLKAKHVAEAALFLA 230
            N ++P    TP +A  + D E           G   KV  L G          A +FLA
Sbjct: 184 CNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVG----------ACVFLA 233

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           SD S++V+GH L VDGG TA
Sbjct: 234 SDASSFVNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  101 bits (254), Expect = 2e-24
 Identities = 62/197 (31%), Positives = 89/197 (45%), Gaps = 5/197 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ---VVSSIGPEKASYRH 61
              GK+ ++ GA SGIG  TA  FA  GA V+ +DI +    +   ++ + G    +YR 
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYR- 370

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   +E    +   ++G  DI+ +NAG+ G  G  LD     +DR +  NL G + 
Sbjct: 371 VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI-GMAGGFLDTSAEDWDRVLDVNLWGVIH 429

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +   R MV     G I+   S A+        AY  SK  +L L     +EL   GI 
Sbjct: 430 GCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIG 489

Query: 182 VNCVSPFGVATPFSAGT 198
           V  + P  V T   A T
Sbjct: 490 VTAICPGFVDTNIVATT 506

Length = 582

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 98.4 bits (245), Expect = 3e-24
 Identities = 83/254 (32%), Positives = 119/254 (46%), Gaps = 20/254 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPE--KASYR 60
           RLQG+ A+I GA SGIG ATA  FA  GA + +  + +E  +  +VV  I  E  KA   
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D++DE    + V  A+++ G LDI+ + AG    V  I D+   QFD T  TN+    
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              K A   +       SII T S  S         Y  +K  ++   ++ A ++ + GI
Sbjct: 172 WLCKAAIPHLPPG---ASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGI 228

Query: 181 RVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKG--IVLKAKHVAEAA---LFLASDE 233
           RVN V+P  V TP   S G   +      K+ +      + +     E A   + LAS E
Sbjct: 229 RVNAVAPGPVWTPLQPSGGQPPE------KIPDFGSETPMKRPGQPVEMAPLYVLLASQE 282

Query: 234 SAYVSGHDLVVDGG 247
           S+YV+G    V GG
Sbjct: 283 SSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 97.2 bits (242), Expect = 3e-24
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 16/250 (6%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE--KASYRHCDVR 65
           KV II GA+ GIG ATA L AE G  V +  +++ +    VV +I  +  +A     DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DE  V         + G LD + +NAG+      +  +D A+  R  ATN+ GS +  + 
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 126 AARVMVANK--IRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHGIRV 182
           A + M        G+I+  +S A+ +G  G +  Y  SK  +  +    A E+   GIRV
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYV 237
           N V P  + T   A       G   +V  +K  +       A+ VA A L+L SDE++Y 
Sbjct: 183 NAVRPGVIYTEIHASG-----GEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYT 237

Query: 238 SGHDLVVDGG 247
           +G  + V GG
Sbjct: 238 TGTFIDVSGG 247

Length = 248

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 7e-24
 Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 32/263 (12%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCD 63
           L+GKV ++ G   G+G   A   A  GA V++A    E  ++V + I     +A     D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + DE Q    VA A+E++G +D + +NA     +  + D D A +   I  N+ G++   
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +     +   +  GSI+   S           AY ++K  LL   +S A+ELG  GIRVN
Sbjct: 123 QAFTPALA--ESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180

Query: 184 CVSPFGVATPFSAGTI--NDVEGFVCKVANLKGI----VLKAK-------------HVAE 224
            V+P         G I  + ++G+    A   G+    +                  VA 
Sbjct: 181 SVAP---------GYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231

Query: 225 AALFLASDESAYVSGHDLVVDGG 247
           A LFLASD +  ++G  L V+ G
Sbjct: 232 AVLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 95.9 bits (239), Expect = 7e-24
 Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 7/177 (3%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCDVR 65
           VA ++GA  G+G A A+ FA  G  V +A       + L   ++   G   A     D R
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGS-AKAVPTDAR 59

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           DE +V        E+ G L+++  NAG A     IL+     F++       G  +A + 
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG-ANVWFPILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           AA+ M+A   RG+II T +TAS  G +G  A+  +K  L  L +S A ELG  GI V
Sbjct: 119 AAKRMLARG-RGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 96.5 bits (241), Expect = 8e-24
 Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 32/280 (11%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASY 59
           +   L+GKVA+I G    +G A AK  A  GA V I D   E    VV+ I     +A  
Sbjct: 4   NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA 63

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAG--------------VAGPVGTILDLDM 105
              DV D++ +E+     +E +G  DI+ + AG              +  P  T  DLD 
Sbjct: 64  VKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDE 123

Query: 106 AQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL 165
             F+     NL G+++  +  A+ MV  K  G+II  +S  +    +   AY+ +K  + 
Sbjct: 124 EGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFTPLTKVPAYSAAKAAIS 182

Query: 166 GLVRSAASELGKHGIRVNCVSP-FGVATPFSAGTINDVEGFVCKVANLKGIVL------- 217
              +  A    K GIRVN ++P F +     A   N+ +G + + AN    +L       
Sbjct: 183 NFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE-DGSLTERANK---ILAHTPMGR 238

Query: 218 --KAKHVAEAALFLASDE-SAYVSGHDLVVDGGFTAVTNV 254
             K + +    L+LA ++ S++V+G  L VDGGF+A + V
Sbjct: 239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYSGV 278

Length = 278

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 9e-24
 Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV---SSIGPEKASYRHCDV 64
           GKV II GA+ GIG A A   A  GA +++A   +     +    +  G E       DV
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP-TDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSVMA 122
            D +  E  +  A+ ++G +DI+ +NAG+        + DL +  F+R +  N  G+V  
Sbjct: 60  SDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSV--FERVMRVNYLGAVYC 117

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
              A   + A+  RG I+  +S A   G      Y  SKH L G   S   EL   G+ V
Sbjct: 118 THAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAV 175

Query: 183 NCVSPFGVAT 192
             V P  VAT
Sbjct: 176 TVVCPGFVAT 185

Length = 263

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 95.9 bits (239), Expect = 9e-24
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 40/269 (14%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASY 59
              GKVA++ G++ GIG+A A   AE G  + +         +E   ++  ++G  KA  
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-EALG-RKALA 58

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNA--GVAGPVGTILDLDMAQFDRTIATNLA 117
              +V D ++++E  A   E++G LD+  +NA  GV  P    ++L+ + +D T+  N  
Sbjct: 59  VKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRP---AMELEESHWDWTMNINAK 115

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTAS--------TVGGSGPHAYTISKHGLLGLVR 169
             +   + AA++M      G II  +S  S        TVG        +SK  L  L R
Sbjct: 116 ALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVG--------VSKAALEALTR 166

Query: 170 SAASELGKHGIRVNCVSPFGVAT------PFSAGTINDVEGFVCKVANLKGIVLKAKHVA 223
             A EL   GI VN VS   V T      P     + D            G +++ + VA
Sbjct: 167 YLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARA-----KTPAGRMVEPEDVA 221

Query: 224 EAALFLASDESAYVSGHDLVVDGGFTAVT 252
            A LFL S E+  + G  ++VDGG + + 
Sbjct: 222 NAVLFLCSPEADMIRGQTIIVDGGRSLLV 250

Length = 250

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 95.2 bits (237), Expect = 1e-23
 Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 3/186 (1%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           K   I GAASGIG  TA LFA +G FV + DI ++    + + +G E       DV D  
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 69  QVEETVA-YAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
                +A +A    G LD +++NAGV G  G   D+ +A  DR +  N+ G +    YAA
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGV-GRGGPFEDVPLAAHDRMVDINVKGVLNGA-YAA 118

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
              +       +I T S+++  G      Y+ +K  + GL  +   E  +HGIRV  V P
Sbjct: 119 LPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWP 178

Query: 188 FGVATP 193
           + V TP
Sbjct: 179 WFVDTP 184

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 27/260 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L GK A++ G   GIG AT     E GA V+          +      PE   +   D+
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTT-------ARSRPDDLPEGVEFVAADL 58

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVA-GPVGTILDLDMAQFDRTIATNLAGSVMAV 123
              +         +E+ G +DI+    G +  P G    L   ++   +  NL  +V   
Sbjct: 59  TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLD 118

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGKHGIRV 182
           +     M+A    G II  TS    +       AY  +K  L    +S + E+   G+RV
Sbjct: 119 RALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRV 177

Query: 183 NCVSPFGVATPFS----------AGTINDVEGFVCKVAN-LKGIVL----KAKHVAEAAL 227
           N VSP  + T  +          AGT  D EG    + + L GI L    + + VAE   
Sbjct: 178 NTVSPGWIETEAAVALAERLAEAAGT--DYEGAKQIIMDSLGGIPLGRPAEPEEVAELIA 235

Query: 228 FLASDESAYVSGHDLVVDGG 247
           FLASD +A ++G + V+DGG
Sbjct: 236 FLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 95.3 bits (238), Expect = 2e-23
 Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 7/198 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSI---GPEKASYRH 61
           LQGKV II GA+SGIGE  A   A  GA +++ A  ++ L  +V S     G        
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL-EEVKSECLELGAPSPHVVP 59

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D +  E+ V  A++ +G LDI+ +NAG++       D  +    + +  N  G V 
Sbjct: 60  LDMSDLEDAEQVVEEALKLFGGLDILINNAGISMR-SLFHDTSIDVDRKIMEVNYFGPVA 118

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             K A   ++    +GSI+  +S A  +G     AY  SKH L G   S  +EL +  I 
Sbjct: 119 LTKAALPHLIERS-QGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNIS 177

Query: 182 VNCVSPFGVATPFSAGTI 199
           V  V P  + T  +   +
Sbjct: 178 VTVVCPGLIDTNIAMNAL 195

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 28/262 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEKASYRHC 62
           R +GKV ++ GAA GIG   A+  A  GA V++ D   EL ++V++ I    + A     
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR-SELVHEVLAEILAAGDAAHVHTA 59

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-----DLDMAQFDRTIATNLA 117
           D+      +  V  A+E++G +D++ +N G     GTI        +  Q +  I  +L 
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVG-----GTIWAKPYEHYEEEQIEAEIRRSLF 114

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
            ++   +     M+  + +G I+  +S A+      P  Y+ +K G+  L  S A E  +
Sbjct: 115 PTLWCCRAVLPHMLERQ-QGVIVNVSSIATRGIYRIP--YSAAKGGVNALTASLAFEHAR 171

Query: 178 HGIRVNCVSPFGVATP-----FSAGTINDVE-----GFVCKV--ANLKGIVLKAKHVAEA 225
            GIRVN V+P G   P      +A  +++ E       V +   ++L G          A
Sbjct: 172 DGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRA 231

Query: 226 ALFLASDESAYVSGHDLVVDGG 247
            LFLASDE++Y++G  L V GG
Sbjct: 232 ILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 94.5 bits (235), Expect = 3e-23
 Identities = 75/249 (30%), Positives = 110/249 (44%), Gaps = 11/249 (4%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSI---GPEKASYRHCDVR 65
           VAI+ GA+ GIG A A   A  G  + I D+  D+   +VV+ +   G     ++  D+ 
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQ-ADIG 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVK 124
           +    E  +  A E +G LD + +NAG+A    G +LDL    FDR IA NL G     +
Sbjct: 62  ELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 125 YAARVMVA-----NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
             AR MV      +    SII  TS  + +       Y ISK GL    R  A  L   G
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           I V+ + P  + T  +A      +  +           + + +A+A   LAS    Y +G
Sbjct: 182 IAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLLPYSTG 241

Query: 240 HDLVVDGGF 248
             + +DGG 
Sbjct: 242 QPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 94.1 bits (234), Expect = 4e-23
 Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 8/244 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI---QDELGNQVVSSIGPEKASYRHCDVR 65
           K+A++ GA  GIG A A+     G  VI                     ++   +  DV 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D ++  E +A   E+ G +DI+ +NAG+         +   +++  I TNL  SV  V  
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEWNDVINTNL-NSVFNVTQ 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
                +  +  G II  +S     G  G   Y+ +K G++G  ++ ASE  ++GI VNC+
Sbjct: 121 PLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCI 180

Query: 186 SPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           +P  +ATP       +V +  V ++      +   + +A A  FL S+ + +++G  + +
Sbjct: 181 APGYIATPMVEQMGPEVLQSIVNQIP--MKRLGTPEEIAAAVAFLVSEAAGFITGETISI 238

Query: 245 DGGF 248
           +GG 
Sbjct: 239 NGGL 242

Length = 245

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 4e-23
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 6/188 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPE--KASYRHCDVR 65
             A+I GA+SGIG+ATA  FA+ G    ++A  QD L   + + +     KA+    D+ 
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAAAYSIDLS 65

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +   +A  +E++G  D++ +NAG+A   G +L++ ++ +   I  NL  SV     
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLT-SVFQCCS 123

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A    +  +  G II  +S A+        AY +SK  L    +  A E   HGIRV  +
Sbjct: 124 AVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 186 SPFGVATP 193
           +   V TP
Sbjct: 184 TLGAVNTP 191

Length = 241

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 94.0 bits (234), Expect = 5e-23
 Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--------QVVSSIGPE-- 55
           L GKVA + GA+ GIG A A   A+ GA V++A      G+          +     E  
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 56  ----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRT 111
               +A     DVRDE QV   V   ++++G LDI+ +NAG A  +  + D    +FD  
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAG-AIWLSLVEDTPAKRFDLM 119

Query: 112 IATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSA 171
              NL G+ +  + A   MV    +G I+  +   S     G  AY   K G+  L    
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAG-QGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 172 ASELGKHGIRVNCVSP 187
           A+EL +HGI VN + P
Sbjct: 179 AAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 93.8 bits (233), Expect = 5e-23
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GKVAII G  +G+G+  A   A+ GA ++   + +    Q        K  +   D+ 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            +K ++  V+ A+E  G +DI+ +NAG+      +L+     +D  I  N        + 
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWDDVININQKTVFFLSQA 124

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            A+  V     G II   S  S  GG    +YT SK  ++GL R+ A+EL ++ I VN +
Sbjct: 125 VAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P  +AT  +A    D        A L+ I          +A  A+FL+S  S YV+G+ 
Sbjct: 185 APGYMATDNTAALRADTAR---NEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYT 241

Query: 242 LVVDGGFTA 250
           L VDGG+ A
Sbjct: 242 LAVDGGWLA 250

Length = 251

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 93.0 bits (232), Expect = 9e-23
 Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 32/252 (12%)

Query: 15  GAASGIGEATAKLFAEHGAFVI------------IADIQDELGNQVVSSIGPEKASYRHC 62
              + I  A AK  AE GA V+            + ++  EL   V+             
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIP-----------L 51

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAGS 119
           DV  ++ ++E      E  G +D +  +  ++  +      LD     F + +  +    
Sbjct: 52  DVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSF 111

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +   K A  +M      GSI+  +  A+     G     ++K  L  L R  A ELG+ G
Sbjct: 112 ISLAKAAKPLMNEG---GSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKG 168

Query: 180 IRVNCVSPFGVATPFSAGT--INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVN +S     T   +G    + +  +  ++A L G    A+ VA AA FL SD +  +
Sbjct: 169 IRVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPL-GRNASAEEVANAAAFLLSDLARGI 227

Query: 238 SGHDLVVDGGFT 249
           +G  L VDGGF+
Sbjct: 228 TGQILYVDGGFS 239

Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 11/251 (4%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN----QVVSSIGPEKASYRHCDV 64
            VA++ G   GIG   A+  A  G  + I D  D+       Q + ++G E   +   DV
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFP-ADV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAV 123
            D    E  +  A   +G +D + +NAGV   V G +LDL    FDR +A NL G     
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 124 KYAARVMVA-----NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           +  A+ M+A          SI+  +S  + +       Y ISK GL    +  A+ L + 
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           GI V  V P  + T  +A      +  + K         + + VA A   LAS +  Y +
Sbjct: 182 GIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYST 241

Query: 239 GHDLVVDGGFT 249
           G  + VDGG +
Sbjct: 242 GQAIHVDGGLS 252

Length = 256

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 91.8 bits (228), Expect = 4e-22
 Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 8/192 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+G+V ++ G ASG+G A    F   GA V + D +   G Q + +   +       DV
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD-KSAAGLQELEAAHGDAVVGVEGDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSV 120
           R     +E VA  +  +G +D +  NAG+      ++D+        FD     N+ G +
Sbjct: 61  RSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +AVK A   +VA+  RGS+I T S A      G   YT +KH ++GLV+  A EL  + +
Sbjct: 121 LAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-V 177

Query: 181 RVNCVSPFGVAT 192
           RVN V+P G+++
Sbjct: 178 RVNGVAPGGMSS 189

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 92.0 bits (228), Expect = 5e-22
 Identities = 84/254 (33%), Positives = 117/254 (46%), Gaps = 20/254 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSIGPE---KASYR 60
           RL+ + A++ G  SGIG A A  +A  GA V I+ +  E  + Q V  I  E   KA   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+ DEK     V  A +  G LDIM   AG    +  I DL   QF +T A N    V
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN----V 161

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA--YTISKHGLLGLVRSAASELGKH 178
            A+ +  +  +    +G+ I TTS+      S PH   Y  +K  +L   R  A ++ + 
Sbjct: 162 FALFWLTQEAIPLLPKGASIITTSSIQAYQPS-PHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 179 GIRVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKGIVLKAKHVAEAA---LFLASDE 233
           GIRVN V+P  + T    S G   D      +   +K    +A   AE A   ++LAS E
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK----RAGQPAELAPVYVYLASQE 276

Query: 234 SAYVSGHDLVVDGG 247
           S+YV+     V GG
Sbjct: 277 SSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 8e-22
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 12/248 (4%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVR 65
            KV II G +SG+G+A AK FAE GA V+I     E   +    I   P +      DVR
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVK 124
           + + V++ V    EK+G +D + +NA  AG  +    DL +  ++  I   L G+    +
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA--AGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQ 118

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG-KHGIRVN 183
              +  +   I+G+II   +T +   G G      +K G+L + R+ A E G K+GIRVN
Sbjct: 119 AVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN 178

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSG 239
            ++P  +     A  + + E    +   ++ + L      + +A  A FL SDE+AY++G
Sbjct: 179 AIAPGPIERTGGADKLWESEEAAKRT--IQSVPLGRLGTPEEIAGLAYFLLSDEAAYING 236

Query: 240 HDLVVDGG 247
             + +DGG
Sbjct: 237 TCITMDGG 244

Length = 252

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 90.4 bits (224), Expect = 1e-21
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 12/250 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G+ A++ GA+ GIGE  A+L    GA V +   + E    + + +G E+      ++ 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG-ERVKIFPANLS 62

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  +V+     A      +DI+ +NAG+    G  + +    +D  +  NL  +    + 
Sbjct: 63  DRDEVKALGQKAEADLEGVDILVNNAGITKD-GLFVRMSDEDWDSVLEVNLTATFRLTRE 121

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M+  +  G II  TS     G  G   Y  SK G++G  +S A E+    + VNCV
Sbjct: 122 LTHPMMRRRY-GRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCV 180

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P  + +  + G +ND +    K A +  I +K       VA A  +LAS E+AYV+G  
Sbjct: 181 APGFIESAMT-GKLNDKQ----KEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQT 235

Query: 242 LVVDGGFTAV 251
           + V+GG   +
Sbjct: 236 IHVNGGMAMI 245

Length = 245

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 89.5 bits (222), Expect = 3e-21
 Identities = 77/259 (29%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDV 64
             +VA++ GA SGIG A A+   + G  V +    +E     V  +     +A  R CDV
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           R   ++E  VA A+ +YG +D++ +NAG +G  G   +L    +   + TNL G     K
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRSGG-GATAELADELWLDVVETNLTGVFRVTK 120

Query: 125 YAARVMVANKIR----GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
               V+ A  +     G II   ST    G      Y+ SKHG++G  ++   EL + GI
Sbjct: 121 ---EVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 177

Query: 181 RVNCVSPFGVATPFSA------------GTINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
            VN V P  V TP +A             T    +    +V    G  +  + VA    +
Sbjct: 178 TVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVP--LGRYVTPEEVAGMVAY 235

Query: 229 LASDESAYVSGHDLVVDGG 247
           L  D +A V+   L V GG
Sbjct: 236 LIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 89.3 bits (221), Expect = 3e-21
 Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 9/248 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGPE--KASYRH 61
           +L GKVAI+ G A GIG+A     A+ GA V+I  +   E    +V+ +G E        
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV   +     V  A+  +G +DI+ +NAG+     T   L+   ++R I  NL+ SV 
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRD-RTFKKLNREDWERVIDVNLS-SVF 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
               A    +     G II  +S     GG G   Y+ +K G+LG  +S A EL K  + 
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180

Query: 182 VNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           VN + P  + T   A    +V +  V K+   +    +A  +A+  ++L  D  AY++G 
Sbjct: 181 VNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKR--FGQADEIAKGVVYLCRD-GAYITGQ 237

Query: 241 DLVVDGGF 248
            L ++GG 
Sbjct: 238 QLNINGGL 245

Length = 247

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.1 bits (227), Expect = 5e-21
 Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 13/187 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI---QDELGNQVVSSIGPEKASYRHC 62
           L GKVA++ GAA GIG A A++ A  GA V+  D+    + L   V + +G    +    
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVG---GTALAL 263

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+           +  E++G LDI+  NAG+     T+ ++D A++D  +A NL   +  
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGITRD-KTLANMDEARWDSVLAVNLLAPLRI 322

Query: 123 VKY--AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            +   AA  +      G I+  +S +   G  G   Y  SK G++GLV++ A  L + GI
Sbjct: 323 TEALLAAGALGDG---GRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGI 379

Query: 181 RVNCVSP 187
            +N V+P
Sbjct: 380 TINAVAP 386

Length = 450

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 88.7 bits (220), Expect = 6e-21
 Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 6/247 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKA----SYRH 61
            Q +  ++ G  SGIG+  A      GA V+I     +        I   K      Y  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV DE QV   V  A   +G L  +   AG +  +G I  +D   + RT+  N+ G++ 
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            +K+AAR +V     GS +  +S A++       AY ++K  +  L++ AA ELG   +R
Sbjct: 125 VLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVR 183

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGH 240
           VN + P  + T   A      E      A      V + + VA  A+FL SD +++++G 
Sbjct: 184 VNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQ 243

Query: 241 DLVVDGG 247
            + VDGG
Sbjct: 244 VINVDGG 250

Length = 276

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 88.3 bits (219), Expect = 6e-21
 Identities = 79/246 (32%), Positives = 113/246 (45%), Gaps = 8/246 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC----DV 64
           KV +I GA+ GIG ATA L A  G  V I   +D    +  +      A  R C    DV
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADA-VRAAGGRACVVAGDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            +E  V          +G LD + +NAG+  P   + D+D A+  R   TN+ G+ +  +
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 125 YAARVMVANK--IRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHGIR 181
            AAR +  ++    G+I+  +S AS +G    +  Y  SK  +  L    A ELG HG+R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V P  + T   A                 G   +A  VAE  ++L SD ++YV+G  
Sbjct: 182 VNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL 241

Query: 242 LVVDGG 247
           L V GG
Sbjct: 242 LDVGGG 247

Length = 248

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 87.7 bits (218), Expect = 8e-21
 Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 17/232 (7%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGPEKASYR 60
           K  +I GA+SGIGEATA+ FA+ GA +I+         ++ DELG +    + P +    
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQL--- 57

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV D + +E  +    E++  +DI+ +NAG+A  +    + D+  ++  I TN+ G +
Sbjct: 58  --DVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLL 115

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              +    +M+A   +G II   S A     +G + Y  +K  +     +   +L   GI
Sbjct: 116 NVTRLILPIMIARN-QGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV-LKAKHVAEAALFLAS 231
           RV  + P  V T FS    +  +    KV   +G+  L  + +AE  L++AS
Sbjct: 175 RVTNIEPGLVETEFSLVRFHGDKEKADKV--YEGVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 87.6 bits (217), Expect = 1e-20
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYR 60
           R +G+VA++ GA+ GIG A A+   +HG  V+      D  + L  +  S+  P    Y+
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CD+ +E+Q+    +    ++  +D+  +NAG+A P   +L      +      N+    
Sbjct: 63  -CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP-EPLLSGKTEGWKEMFDVNVLALS 120

Query: 121 MAVKYAARVMVANKI-RGSIICTTSTA--STVGGSGPHAYTISKHGLLGL---VRSAASE 174
           +  + A + M    +  G II   S +       S  H Y  +KH +  L   +R    E
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
              H IR   +SP  V T F+    ++               LK + VA A L++ S   
Sbjct: 181 AKTH-IRATSISPGLVETEFAFKLHDNDPEKAAATYE-SIPCLKPEDVANAVLYVLS-TP 237

Query: 235 AYVSGHDLVV 244
            +V  HD+++
Sbjct: 238 PHVQIHDILL 247

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M + +L+G+VA++ G +SGIG AT +L  E GA V I    +E      + +  +    R
Sbjct: 1   MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGAR 60

Query: 61  ----HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                CDV DE  V    A    ++G +D++ +NAG  G V T  D     +   +    
Sbjct: 61  LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWRDELELKY 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS--KHGLLGLVRSAASE 174
              +   + A   ++      SI+C  S  +      PH    S  + GLL LV+S A+E
Sbjct: 120 FSVINPTR-AFLPLLRASAAASIVCVNSLLAL--QPEPHMVATSAARAGLLNLVKSLATE 176

Query: 175 LGKHGIRVNCVSPFGVAT-------PFSAGTINDVEGFVCKVANLKGIVL----KAKHVA 223
           L   G+RVN +    V +          A      E +   +A  KGI L    +    A
Sbjct: 177 LAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAA 236

Query: 224 EAALFLASDESAYVSGHDLVVDGGF 248
            A  FLAS  S+Y +G  + V GGF
Sbjct: 237 RALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 86.5 bits (215), Expect = 3e-20
 Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 18/261 (6%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--H 61
           L+GK  +IMG A+   I    AK  AE GA +      + L  +V   +  E  S     
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRV-EELAEELGSDLVLP 62

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAG 118
           CDV +++ ++   A   +K+G LD +  +   A      G  LD     F   +  + A 
Sbjct: 63  CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDIS-AY 121

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           S  A+  AAR ++ N   GSI+  T   S       +   ++K  L   VR  A++LGK 
Sbjct: 122 SFTALAKAARPLMNNG--GSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKE 179

Query: 179 GIRVNCVSPFGVATPFSAGT--INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           GIRVN +S   + T  ++G      +       A L+  V   + V   A FL SD S+ 
Sbjct: 180 GIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNV-TIEEVGNTAAFLLSDLSSG 238

Query: 237 VSGHDLVVDGGFTAVTNVMSM 257
           ++G  + VD G+    ++M M
Sbjct: 239 ITGEIIYVDSGY----HIMGM 255

Length = 259

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 86.2 bits (214), Expect = 3e-20
 Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 29/251 (11%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII------ADIQDELGNQVVSSIGPEKASYRHC 62
            VA++ GAA  IG A A+  A  G  V++      A+ Q       ++++       +  
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQR--LKDELNALRNSAVLVQ-A 57

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+ D     + VA A   +G  D++ +NA    P   +       +      NL    + 
Sbjct: 58  DLSDFAACADLVAAAFRAFGRCDVLVNNASAFYP-TPLGQGSEDAWAELFGINLKAPYLL 116

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           ++  AR  +A    GSII      +    +G  AY +SK  L GL RSAA EL  + IRV
Sbjct: 117 IQAFAR-RLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 183 NCVSPFGVATPFSAGTINDVEG--FVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
           N ++P         G I   E      +   L+ + LK    A+ +A+A +FL    S Y
Sbjct: 175 NGIAP---------GLILLPEDMDAEYRENALRKVPLKRRPSAEEIADAVIFLLD--SNY 223

Query: 237 VSGHDLVVDGG 247
           ++G  + VDGG
Sbjct: 224 ITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 86.1 bits (214), Expect = 4e-20
 Identities = 77/256 (30%), Positives = 109/256 (42%), Gaps = 31/256 (12%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADI-QDELGNQVVSSIGPEKA 57
             KVA+I G A  IG A A+     G  V I        AD    EL      S     A
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGS-----A 59

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV--AGPVGTILDLDMAQFDRTIATN 115
           +    D+ D   + E VA  +  +G LD + +NA      P+G+I     AQ+D   A+N
Sbjct: 60  AALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSI---TEAQWDDLFASN 116

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L       + AA  +     RG+I+  T   +     G   Y  +K  L  L RS A EL
Sbjct: 117 LKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALEL 174

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLAS 231
               +RVN V+P  +  P    + ++      + A L    LK     + +AEA  FL +
Sbjct: 175 APE-VRVNAVAPGAILWPEDGNSFDEEA----RQAILARTPLKRIGTPEDIAEAVRFLLA 229

Query: 232 DESAYVSGHDLVVDGG 247
           D S +++G  L VDGG
Sbjct: 230 DAS-FITGQILAVDGG 244

Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 85.8 bits (213), Expect = 7e-20
 Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 27/257 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY--RHC 62
              GK  +++G  SGI    A+ FA  GA V +A    E  +  V+ +            
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVM 121
           DVRD   VE   A   +++G +D++ S  G AG        +    F   +  +L G+  
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLVS--GAAGNFPAPAAGMSANGFKTVVDIDLLGTFN 123

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
            +K A  ++   +   SII  ++  + V          +K G+  L R+ A E G  GIR
Sbjct: 124 VLKAAYPLL--RRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIR 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGF-------VCKVANLKGIVLK----AKHVAEAALFLA 230
           VN + P         G I   EG          + A  + + LK     + +A AALFLA
Sbjct: 182 VNSIVP---------GPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLA 232

Query: 231 SDESAYVSGHDLVVDGG 247
           SD ++Y++G  L VDGG
Sbjct: 233 SDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 83.4 bits (207), Expect = 8e-20
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 23/178 (12%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII-----------ADIQDELGNQVVSSIGPEKA 57
              +I G   G+G A A+  A  GA  ++           A++  EL             
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAE------V 54

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
           +   CDV D   +   +A      G LD +  NAGV    G + +L   +F+R +A  + 
Sbjct: 55  TVAACDVADRDALAALLAALPAALGPLDGVVHNAGVL-DDGPLEELTPERFERVLAPKVT 113

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           G+    +     +  +   G+ +  +S A  +G  G   Y  +   L  L     +E 
Sbjct: 114 GAWNLHE-----LTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 85.8 bits (212), Expect = 8e-20
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVR 65
           G+ A+I G ASGIG AT   FA  GA V++ D+      Q V+ +  E        CDVR
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAG--VAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             ++V      A    G +D+++SNAG  V GP   I+++    +   I  +L GS+  V
Sbjct: 66  HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGP---IVEMTHDDWRWVIDVDLWGSIHTV 122

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +     ++     G ++ T S A  V  +G  AY ++K+G++GL  + A E+   GI V+
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182

Query: 184 CVSPFGVAT 192
            + P  V T
Sbjct: 183 VLCPMVVET 191

Length = 275

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 84.9 bits (210), Expect = 1e-19
 Identities = 66/273 (24%), Positives = 98/273 (35%), Gaps = 56/273 (20%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           +I GAASGIG ATA+L  + G  VI  D+++               +    D+   +   
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE---------------ADVIADLSTPEGRA 47

Query: 72  ETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
             +A  + +  G LD + + AGV G                +  N  G   A+  A    
Sbjct: 48  AAIADVLARCSGVLDGLVNCAGVGGTTVA---------GLVLKVNYFGLR-ALMEALLPR 97

Query: 131 VANKIRGSIICTTSTASTVGG-----------------------SGPH----AYTISKHG 163
           +      + +  +S A                                    AY  SK  
Sbjct: 98  LRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEA 157

Query: 164 LLGLV-RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG--FVCKVANLKGIVLKAK 220
           L     R AA+ L   G+RVN V+P  V TP     + D  G   V       G   +  
Sbjct: 158 LTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRAEPD 217

Query: 221 HVAEAALFLASDESAYVSGHDLVVDGGFTAVTN 253
            +A    FLASD +++++G +L VDGG  A   
Sbjct: 218 EIAPVIAFLASDAASWINGANLFVDGGLDASMR 250

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 8/190 (4%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCDVRD 66
            +I GA+SGIG A A+ FA+ G  V +A    D  DEL  ++++            DV D
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLN--PNPSVEVEILDVTD 58

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
           E++ +  +A    + G LD++  NAGV     ++ DL    F  TI TNL G+   ++ A
Sbjct: 59  EERNQLVIAELEAELGGLDLVIINAGVGKG-TSLGDLSFKAFRETIDTNLLGAAAILEAA 117

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
                A   RG ++  +S A+  G  G  AY+ SK  L  L  S   ++ K GIRV  ++
Sbjct: 118 LPQFRAKG-RGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVIN 176

Query: 187 PFGVATPFSA 196
           P  + TP +A
Sbjct: 177 PGFIDTPLTA 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 84.6 bits (209), Expect = 1e-19
 Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 21/242 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKA-------- 57
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV   I  E          
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C     +  ++        Y  LD +  NAG+ G V  + + +   +      N+ 
Sbjct: 62  DLLTCTS---ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVN 118

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
            + M  +    +++ +   GS++ T+S+    G +   AY +SK    GL +  A E  +
Sbjct: 119 ATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
             +RVNC++P G  T   A      +    K             +    L+L  D+S   
Sbjct: 178 RNLRVNCINPGGTRTAMRASAFPTEDPQKLK---------TPADIMPLYLWLMGDDSRRK 228

Query: 238 SG 239
           +G
Sbjct: 229 TG 230

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.6 bits (212), Expect = 2e-19
 Identities = 81/265 (30%), Positives = 120/265 (45%), Gaps = 36/265 (13%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPE--KASYRHC 62
           L GKVA++ GAA+G+G A A   A  GA V++ D+   L  + V+  I     KA     
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+      +E VA A+   G LDI+ +NAG+      + ++   ++D  IA +L G  + 
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHFLL 127

Query: 123 VKYAA-----RVMVAN-KIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
            + AA     +   A   + G I+ T+S A  VG  G   Y  +K G+  L  SAA  LG
Sbjct: 128 TRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALG 187

Query: 177 KHGIRVNCVSP----------FGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAA 226
           ++G+R N + P          FG A    AG I+                L  +HV    
Sbjct: 188 RYGVRANAICPRARTAMTADVFGDAPDVEAGGIDP---------------LSPEHVVPLV 232

Query: 227 LFLASDESAYVSGHDLVVDGGFTAV 251
            FLAS  +A V+G   +V G    +
Sbjct: 233 QFLASPAAAEVNGQVFIVYGPMVTL 257

Length = 306

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 84.1 bits (208), Expect = 2e-19
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYRHCD 63
            +A++ G + GIG ATA L A+ G  V +          E+ N +  + G  KA     D
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG--KAFVLQAD 59

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + DE QV        +    L  + +NAG+     T+ +L   + +R ++TN+ G  +  
Sbjct: 60  ISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCC 119

Query: 124 KYAARVMVANK--IRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHGI 180
           + A + M        G+I+  +S AS +G  G +  Y  SK  +  L    + E+   GI
Sbjct: 120 REAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGI 179

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--KAKHVAEAALFLASDESAYVS 238
           RVNCV P  + T   A       G V +V +   +    + + VA+A ++L SD+++YV+
Sbjct: 180 RVNCVRPGFIYTEMHAS--GGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVT 237

Query: 239 GHDLVVDGG 247
           G  + + GG
Sbjct: 238 GSFIDLAGG 246

Length = 247

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI---------QDELGNQVVSSIGPE- 55
           L G+V I+ GA  GIG A A  FA  GA V++ DI                VV  I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 56  -KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
            +A     D+ D       V  A+E +G LD++ +NAG+      I ++   ++D  IA 
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRD-RMIANMSEEEWDAVIAV 122

Query: 115 NLAGSVMAVKYAARVMVA-----NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
           +L G    +++AA    A       +   II T+S A   G  G   Y+ +K G+  L  
Sbjct: 123 HLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTL 182

Query: 170 SAASELGKHGIRVNCVSP 187
            AA+ELG++G+ VN ++P
Sbjct: 183 VAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSIGPEKASYRHCDV 64
           L+GKVA++ G  +G+G+  A   AE G  ++  +I +     + V+++G    S    D+
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLT-ADL 66

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           R    +   +  A+ ++G +DI+ +NAG+      I +     +D  +  N+       +
Sbjct: 67  RKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI-EFSEKDWDDVMNLNIKSVFFMSQ 125

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AA+  +A    G II   S  S  GG    +YT SK G++G+ R  A+E  KH I VN 
Sbjct: 126 AAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNA 185

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK--------AKHVAEAALFLASDESAY 236
           ++P  +AT       N+ +           I+ +           +    +FLAS  S Y
Sbjct: 186 IAPGYMAT-------NNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDY 238

Query: 237 VSGHDLVVDGGFTA 250
           ++G+ + VDGG+ A
Sbjct: 239 INGYTIAVDGGWLA 252

Length = 253

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 13/253 (5%)

Query: 8   GKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--HCD 63
           GK  +I G A+   I    AK   E GA +      + L  +V         S     CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDMAQFDRTIATNLAGSV 120
           V ++++++E  A   + +G LD +  +   A      G  LD     F + +  + A S+
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDIS-AYSL 119

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +++  AA  ++     GSI+  +   S     G +   ++K  L   VR  A ELG+ GI
Sbjct: 120 VSLAKAALPIMNPG--GSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYELGRKGI 177

Query: 181 RVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           RVN +S  P            + +  +  + A L   V  A+ V   A FL SD S+ ++
Sbjct: 178 RVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVT-AEEVGNTAAFLLSDLSSGIT 236

Query: 239 GHDLVVDGGFTAV 251
           G  + VDGG+  +
Sbjct: 237 GEIIYVDGGYHIM 249

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 7e-19
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L+GKVA++ GA+SG+G   A++ A+ GA V++A  + E   ++ + I  E   A     D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D + ++  VA+A  + G++DI+ +N+GV+     ++D+  A FD    TN  G+    
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVA 125

Query: 124 KYAARVMVA-------NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
           +  A+ M+A        K  G II   S A          Y +SK  ++ + R+ A E G
Sbjct: 126 QEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG 185

Query: 177 KHGIRVNCVSPFGVATPFSAGTIN----DVEGFVCKVANL-KGIVLKAKHVAEAALFLAS 231
           +HGI VN + P  + T      IN    + E     V+ L +  V K + +    L LA+
Sbjct: 186 RHGINVNAICPGYIDT-----EINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAA 240

Query: 232 DESAYVSGHDLVVDGGF 248
           DES +++G  +  D GF
Sbjct: 241 DESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 7e-19
 Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 30/267 (11%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKA 57
           M   R  GKV ++ GAA GIG   A   A  GA V++ D + EL ++V + +   G E  
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD-RSELVHEVAAELRAAGGEAL 59

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD-RTIATNL 116
           +    D+      +  +A A+E +G +D++ +N G     GTI      +++   I   +
Sbjct: 60  AL-TADLETYAGAQAAMAAAVEAFGRIDVLINNVG-----GTIWAKPFEEYEEEQIEAEI 113

Query: 117 AGSVMAVKYAAR----VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA 172
             S+    +  R     M+A    G+I+  +S A+   G     Y+ +K G+  L  S A
Sbjct: 114 RRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLA 170

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAK------------ 220
            E  +HGIRVN V+P G   P      N       + A  + IV +              
Sbjct: 171 FEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTID 230

Query: 221 HVAEAALFLASDESAYVSGHDLVVDGG 247
               A LFLASDE++Y++G  L V GG
Sbjct: 231 EQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 82.0 bits (202), Expect = 1e-18
 Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 20/256 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYR 60
           L GKVA++ GA+ GIG A A   A  GA V I         DE   ++ S+ G  KA   
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGG--KAFLI 61

Query: 61  HCDVRD----EKQVEETVAYAIEKYGS--LDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
             D+      +K VE+       + G+  +DI+ +NAG+ G  GTI +     FD  +A 
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI-GTQGTIENTTEEIFDEIMAV 120

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           N+      ++    ++ A    G +I  +S    +G +G  AY +SK  L  +    A  
Sbjct: 121 NIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKH 177

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVE--GFVCKVANLKGIVLKAKHVAEAALFLASD 232
           LG+ GI VN + P    T  +A  ++D E   F    +++ G + + + +A+A  FLAS 
Sbjct: 178 LGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATN-SSVFGRIGQVEDIADAVAFLASS 236

Query: 233 ESAYVSGHDLVVDGGF 248
           +S +V+G  + V GGF
Sbjct: 237 DSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 61/193 (31%), Positives = 84/193 (43%), Gaps = 8/193 (4%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE--KASYRHCDVR 65
           KVA++ GA  GIG    +  A+ G   +I   +D E G   V  +  E     +   DV 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D+  +E    +  EKYG LDI+ +NAG+A            Q   T+ TN  G  + V  
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFG-TVDVTQ 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   ++     G I+  +S      GS   AY +SK  L  L R  A EL + GI+VN  
Sbjct: 120 ALLPLLKKSPAGRIVNVSSGL----GSLTSAYGVSKAALNALTRILAKELKETGIKVNAC 175

Query: 186 SPFGVATPFSAGT 198
            P  V T    G 
Sbjct: 176 CPGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 10/197 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY--RHC 62
              GKVA+I GAASG G A A++ A  G  +++AD+Q +  ++ V+ +  + A       
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRT 62

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D  QVE     A+E++G++ ++++NAGV G  G + +  +A ++  +  NL G +  
Sbjct: 63  DVSDAAQVEALADAALERFGAVHLLFNNAGV-GAGGLVWENSLADWEWVLGVNLWGVIHG 121

Query: 123 VKYAARVMVAN--KIRGSIICTTSTASTVGGSGPHA---YTISKHGLLGLVRSAASELGK 177
           V+    +M+A   K         +TAS  G   P A   Y +SKH ++ L  +   +L  
Sbjct: 122 VRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSL 181

Query: 178 HGIRVNC--VSPFGVAT 192
              +V    + P+ V T
Sbjct: 182 VTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 30/204 (14%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVI--------IADIQDELGNQVVSSIGP--- 54
           L+ ++ ++ GA  GIG   A  +A HGA VI        +  + DE    + ++ GP   
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDE----IEAAGGPQPA 65

Query: 55  ------EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQF 108
                   A+ ++       Q+ +T+    E++G LD +  NAG+ G +G +   D   +
Sbjct: 66  IIPLDLLTATPQNYQ-----QLADTIE---EQFGRLDGVLHNAGLLGELGPMEQQDPEVW 117

Query: 109 DRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV 168
              +  N+  + M  +    +++ +    S++ T+S+    G +   AY +SK    G++
Sbjct: 118 QDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYAVSKFATEGMM 176

Query: 169 RSAASELGKHGIRVNCVSPFGVAT 192
           +  A E     +RVNC++P G  T
Sbjct: 177 QVLADEYQGTNLRVNCINPGGTRT 200

Length = 247

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 3e-18
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 13/202 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYR 60
            L GK  ++ GA+SGIGEA A+ FA  GA V+      D+ D + +++  + G   A   
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG--DAMAV 94

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAG--VAGPVGTILDLDMAQFDRTIATNLAG 118
            CD+ D   V+  VA   ++ G +DI+ +NAG  +  P+   LD      +RT+  N   
Sbjct: 95  PCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLD-RWHDVERTMVLNYYA 153

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELG 176
            +  ++  A  M+     G II   +T   +  + P    Y  SK  L  + R   +E G
Sbjct: 154 PLRLIRGLAPGMLERG-DGHII-NVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG 211

Query: 177 KHGIRVNCVSPFGVATPFSAGT 198
             G+    +    VATP  A T
Sbjct: 212 DRGVHSTTLYYPLVATPMIAPT 233

Length = 293

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 61/196 (31%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGP-EKAS 58
             L GK   I GA+ GIG A A   A  GA ++IA    E    L   + ++    E A 
Sbjct: 2   MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG 61

Query: 59  YR----HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
            +      DVRDE QV   VA A+E++G +DI  +NA  A  +    D  M +FD     
Sbjct: 62  GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNAS-AINLTGTEDTPMKRFDLMQQI 120

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS--GPH-AYTISKHGLLGLVRSA 171
           N+ G+ +  +     +   K     I T S    +      PH AYT++K+G+       
Sbjct: 121 NVRGTFLVSQACLPHL--KKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGL 178

Query: 172 ASELGKHGIRVNCVSP 187
           A E    GI VN + P
Sbjct: 179 AEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 79.3 bits (196), Expect = 8e-18
 Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 28/234 (11%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIA-----------DIQDELGNQVVSSIGPEKAS 58
           V +I GA+SGIG ATA  FAE GA V++A               ELG + ++ +      
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVA----- 56

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV D  QVE     A+E++G +D   +NAGV    G   D+   +F R    N  G
Sbjct: 57  ----DVADAAQVERAADTAVERFGRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLG 111

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
            V     A   +   +  G++I   S           AY+ SKH + G   S  +EL   
Sbjct: 112 HVYGTLAALPHLRR-RGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHD 170

Query: 179 G--IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
           G  I V  V P  + TPF          ++ K       + + + VAEA +  A
Sbjct: 171 GAPISVTLVQPTAMNTPF----FGHARSYMGKKPKPPPPIYQPERVAEAIVRAA 220

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 58/206 (28%), Positives = 84/206 (40%), Gaps = 22/206 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSI 52
           M    +  +V +I GA++G+G ATA+ FA  GA V++          +  E+      ++
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEAL 60

Query: 53  GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDR 110
               A     DV D + V+     A E+ G +D   +NA V   GP     D+   +F R
Sbjct: 61  -AVVA-----DVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPF---EDVTPEEFRR 111

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
                  G V     A R M   + RG+II   S  +        AY  +KH + G   S
Sbjct: 112 VTEVTYLGVVHGTLAALRHMRP-RDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDS 170

Query: 171 AASELGKHG--IRVNCVSPFGVATPF 194
              EL   G  + V  V P  V TP 
Sbjct: 171 LRCELLHDGSPVSVTMVQPPAVNTPQ 196

Length = 334

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 77.8 bits (192), Expect = 3e-17
 Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 4/190 (2%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           KVA++ GA+ GIG   A+  A  G  V +     E    + +S G         D RD +
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGG--DVEAVPYDARDPE 58

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
                V    +++G +D++  NAG+  P  T+ +   A+ +   + N+       +    
Sbjct: 59  DARALVDALRDRFGRIDVLVHNAGIGRP-TTLREGSDAELEAHFSINVIAPAELTRALLP 117

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            +      G ++   S +     +G   Y+ SK  L  L  +   E   HG+RV+ V P 
Sbjct: 118 AL-REAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 189 GVATPFSAGT 198
            V TP + G 
Sbjct: 177 FVDTPMAQGL 186

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 65/246 (26%), Positives = 97/246 (39%), Gaps = 27/246 (10%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRHCD 63
           GKV +I GA SGIG+ TA+  A+ GA VIIA   +E G +  + I    G  K      D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGV-AGPVGTILDLDMAQFDRTIATNLAGS--- 119
           +     V +     + ++  LDI+ +NAG+ A P     D     F+   A N  G    
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKD----GFELQFAVNYLGHFLL 116

Query: 120 ------VMAVKYAARVMVANKI---RGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVR 169
                 V+     +R++  + I    G I              P+ AY  SK   +   R
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK-AKHVAEAALF 228
             A  L   G+ VN + P  V T      +     F      L+  + K  +  A+ AL+
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTEL----LRRNGSFFLLYKLLRPFLKKSPEQGAQTALY 232

Query: 229 LASDES 234
            A+   
Sbjct: 233 AATSPE 238

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 73/250 (29%), Positives = 107/250 (42%), Gaps = 21/250 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASYRHCDV 64
             GK  +++G + GIG A  + F   GA V        +   ++    G   A+    D 
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG---ATAVQTDS 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   V + V     K G+LDI+  NAG+A   G  L+LD    DR    N+     A  
Sbjct: 61  ADRDAVIDVVR----KSGALDILVVNAGIA-VFGDALELDADDIDRLFKINIHAPYHASV 115

Query: 125 YAARVMVANKIRGSIICTTST-ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
            AAR M      G II   S     +  +G  AY  SK  L G+ R  A + G  GI +N
Sbjct: 116 EAARQM---PEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITIN 172

Query: 184 CVSPFGVATPF--SAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
            V P  + T    + G + D +  F+     +K    + + VA    +LA  E+++V+G 
Sbjct: 173 VVQPGPIDTDANPANGPMKDMMHSFMA----IKRHG-RPEEVAGMVAWLAGPEASFVTGA 227

Query: 241 DLVVDGGFTA 250
              +DG F A
Sbjct: 228 MHTIDGAFGA 237

Length = 237

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 78.6 bits (194), Expect = 6e-17
 Identities = 71/239 (29%), Positives = 101/239 (42%), Gaps = 29/239 (12%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDE---LGNQVVSSIG 53
            L G V +I GA+SGIG+ATA+ FA  GA +++A         + +E   LG +V+    
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVP- 62

Query: 54  PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
                    DV D  QV+     A    G +D+  +N GV G VG   +  +   ++ I 
Sbjct: 63  --------TDVTDADQVKALATQAASFGGRIDVWVNNVGV-GAVGRFEETPIEAHEQVIQ 113

Query: 114 TNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAAS 173
           TNL G  M   +AA  +   +  G  I   S           AY+ SK GL G   +   
Sbjct: 114 TNLIGY-MRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 174 ELGKH-GIRVNCVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
           EL  H  I V  V P  + TP F  G       +  +       V   + VA+A + LA
Sbjct: 173 ELADHPDIHVCDVYPAFMDTPGFRHGA-----NYTGRRLTPPPPVYDPRRVAKAVVRLA 226

Length = 330

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 27/261 (10%)

Query: 6   LQGKVAIIMGAA--SGIGEATAKLFAEHGAFVII-----------ADIQDELGNQVVSSI 52
           L  K+A++ GA+  +GIG A  +  A  G  +               + D+    +   I
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 53  GPEKASYRH--CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                   H   D+              E+ G   I+ +NA  +     + +L   Q D+
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTH-TRLEELTAEQLDK 121

Query: 111 TIATNLAGSVM-AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
             A N+  +++ +  +A +     K  G II  TS  S        AY  +K  +    +
Sbjct: 122 HYAVNVRATMLLSSAFAKQY--DGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTK 179

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAAL 227
           S A EL + GI VN V+P    T +    +    V  F       +G V +    A    
Sbjct: 180 SLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKF------PQGRVGEPVDAARLIA 233

Query: 228 FLASDESAYVSGHDLVVDGGF 248
           FL S+E+ +++G  +  +GGF
Sbjct: 234 FLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 4e-16
 Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 12/183 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYR 60
            L GKV +I GA+SGIG ATA   AE GA V +     +  DEL  ++ +  G   A   
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG--TAHAY 425

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-MAQFDRTIATNLAGS 119
            CD+ D   V+ TV   + ++G +D + +NAG +         D    ++RT+A N  G+
Sbjct: 426 TCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGA 485

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGK 177
           V  +      M   +  G ++  +S    V  + P   AY  SK  L      AASE   
Sbjct: 486 VRLILGLLPHMRERR-FGHVVNVSSIG--VQTNAPRFSAYVASKAALDAFSDVAASETLS 542

Query: 178 HGI 180
            GI
Sbjct: 543 DGI 545

Length = 657

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 5e-16
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 17/262 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPE 55
                ++GK  +I G   GIG+A    FA+ G  +        +  +++   +    G  
Sbjct: 1   NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI- 59

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNA-----GVAGPVGTILDLDMAQFDR 110
           KA     ++ + +  +E      E +  +D   SNA      V G     + L     + 
Sbjct: 60  KAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNN 119

Query: 111 TIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
                +   V+  + AA+ M   K+  GSII  +ST + V       +  SK  +  +V+
Sbjct: 120 IYTATVNAFVVGAQEAAKRM--EKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVK 177

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI--VLKAKHVAEAAL 227
            AA+ELG+  IRVN VS   + T  +     + E    K   L  +  + + + +A A L
Sbjct: 178 YAATELGEKNIRVNAVSGGPIDTD-ALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACL 236

Query: 228 FLASDESAYVSGHDLVVDGGFT 249
           FL S+++++++G  +VVDGG T
Sbjct: 237 FLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 30/186 (16%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
            I++GA   IG A A+L + HG  VI A              G     Y   D+ D    
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA--------------GRSSGDY-QVDITD---- 41

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
           E ++    EK G  D + S AG A     + +L  A F R + + L G +  V++    +
Sbjct: 42  EASIKALFEKVGHFDAIVSTAGDA-EFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL 100

Query: 131 VANKIRGSIICTTSTAS---TVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
                 GSI  T+   +     GG+   A       L G VR+AA EL + GIR+N VSP
Sbjct: 101 NDG---GSITLTSGILAQRPIPGGA---AAATVNGALEGFVRAAAIELPR-GIRINAVSP 153

Query: 188 FGVATP 193
             V   
Sbjct: 154 GVVEES 159

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 15/249 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQ---VVSSIGPEKASYRH 61
           L+ KV ++ G+  GIG A A   A+ G+ V++ A  + E  N+   +V   G E      
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVL- 62

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV   +  E      I++YG  DI+ +NAG+ G     L++D    D+ I+T+    + 
Sbjct: 63  ADVSTREGCETLAKATIDRYGVADILVNNAGL-GLFSPFLNVDDKLIDKHISTDFKSVIY 121

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +  A+ M   +  G+I+   S A      G   Y   K  ++ L +  A EL    IR
Sbjct: 122 CSQELAKEM---REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK-IR 177

Query: 182 VNCVSPFGVATPFSAGTI---NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           VN ++P  V T             E    +   L G +L  + VAE    +   ES  ++
Sbjct: 178 VNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES--IT 235

Query: 239 GHDLVVDGG 247
           G   V+D G
Sbjct: 236 GQVFVLDSG 244

Length = 252

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 54/242 (22%), Positives = 94/242 (38%), Gaps = 14/242 (5%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAF---VIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           V I+ GA+ GIG A A+   + G+    V++A  ++ L           + +    D+ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
              VE+ +    +  G  D++ +NAG  GPV  I  +D+ +  +    NL   V      
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTL 120

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            R      ++ +++  +S A+     G   Y  SK       R  A+E     +RV   +
Sbjct: 121 LRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRVLSYA 178

Query: 187 PFGVATPF------SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           P  V T        ++        F  +    KG +L  +  AE    L   +  + SG 
Sbjct: 179 PGVVDTDMQREIRETSADPETRSRF--RSLKEKGELLDPEQSAEKLANLLEKDK-FESGA 235

Query: 241 DL 242
            +
Sbjct: 236 HV 237

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 72.9 bits (179), Expect = 3e-15
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 9/249 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH-CDV 64
           + GK+ ++ G + GIG   A+ F E GA VII+  + E        +           D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E+ +E  VA   E+   LD++ +NAG A     +     + +D+ +  N+       +
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAG-ATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 125 YAARVMVANKIRG---SIICTTSTASTVG-GSGPHAYTISKHGLLGLVRSAASELGKHGI 180
               ++ A         +I   S A  V  G   ++Y  SK  +  L R  A EL    I
Sbjct: 123 ALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHI 182

Query: 181 RVNCVSPFGVATPFSAGTINDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
            VN ++P    +  +A  +ND        K   L G   + + +A  A+ LAS   AY++
Sbjct: 183 TVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPL-GRWGRPEDMAGLAIMLASRAGAYLT 241

Query: 239 GHDLVVDGG 247
           G  + VDGG
Sbjct: 242 GAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 72.4 bits (178), Expect = 5e-15
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGN------QVVSSIGPEKA 57
           L GK A++ G A+   I    A+     GA + I  + DE G       ++   + P   
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPS-- 61

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIM---YSNAGVAGPVGTILDLDMAQFDRTIAT 114
            +  CDV+D+ Q+EET     +K+G LDI+    + AG    +G         F R +  
Sbjct: 62  LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEI 121

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           +        K A  +M      GSI+  T           +   ++K  L   VR  A+E
Sbjct: 122 SAYSLAPLCKAAKPLMSEG---GSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAE 178

Query: 175 LGKHGIRVNCVSPFGVATPFSA--GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD 232
           LG   IRVN +S   + T  S+  G I D+   V + A L+  V +   V   A FL SD
Sbjct: 179 LGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQ-TEVGNTAAFLLSD 237

Query: 233 ESAYVSGHDLVVDGGFTAVTNVMSM 257
            ++ ++G  + VD G+     +M M
Sbjct: 238 LASGITGQTIYVDAGYC----IMGM 258

Length = 258

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 71.7 bits (176), Expect = 8e-15
 Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 15/194 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYRH 61
           L GK   I GA+ GIG+A A   A  GA V+I    A+   +L   + ++    +A+   
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 62  -----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                 D+RDE QV   V  A+EK+G +DI+ +NA      GT LD  M ++D  +  N 
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGT-LDTPMKRYDLMMGVNT 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS--GPH-AYTISKHGLLGLVRSAAS 173
            G+ +  K     +   K +   I   S    +       H AYT++K+G+   V   A 
Sbjct: 120 RGTYLCSKACLPYL--KKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMAE 177

Query: 174 ELGKHGIRVNCVSP 187
           E    GI VN + P
Sbjct: 178 EFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 71.7 bits (176), Expect = 8e-15
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 18/258 (6%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L+GK  ++MG A+   I    A+     GA ++     + L  +V     ++  +++   
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNL- 116
            CDV  ++++        E+ G +  +      A      G  L+     F   +A N+ 
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGF--LLAQNIS 122

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
           A S+ AV   A+ ++     GSI+  T           +   ++K  L   V+  A++LG
Sbjct: 123 AYSLTAVAREAKKLMTEG--GSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLG 180

Query: 177 KHGIRVNCVSPFGVATPFSA---GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           K GIRVN +S   + T  SA   G  N +   + + A L+      + V + A FL SD 
Sbjct: 181 KDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLRRTT-TQEEVGDTAAFLFSDL 238

Query: 234 SAYVSGHDLVVDGGFTAV 251
           S  V+G ++ VD G+  +
Sbjct: 239 SRGVTGENIHVDSGYHII 256

Length = 257

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 71.3 bits (175), Expect = 8e-15
 Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 48/263 (18%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC------ 62
           ++A++ G   GIG A  +  A+ G              +V ++ GP +            
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDG-------------YRVAANCGPNEERAEAWLQEQGA 47

Query: 63  ----------DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
                     DV   +  +  VA    + G +D++ +NAG+     T   +   Q+   I
Sbjct: 48  LGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDA-TFKKMTYEQWSAVI 106

Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA 172
            TNL  SV  V       +  +  G II  +S     G  G   Y+ +K G++G  ++ A
Sbjct: 107 DTNLN-SVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALA 165

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--------KAKHVAE 224
            E    G+ VN +SP  +AT        DV         L  IV         + + +A 
Sbjct: 166 QEGATKGVTVNTISPGYIATDMVMAMREDV---------LNSIVAQIPVGRLGRPEEIAA 216

Query: 225 AALFLASDESAYVSGHDLVVDGG 247
           A  FLAS+E+ Y++G  L ++GG
Sbjct: 217 AVAFLASEEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 71.1 bits (174), Expect = 1e-14
 Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 14/243 (5%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ-VVSSIGPEKASYR--HCDVRDEK 68
           ++ GA+ GIG A A   A  G  + +         + VVS+I  +  + R    DV D  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
                +   I ++G+   +  NAG+         L    +D  I TNL G    +     
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRD-AAFPALSEEDWDIVIHTNLDGFYNVIHPCTM 120

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            M+  +  G II   S +  +G  G   Y+ +K GL+G  ++ A EL K  I VNC++P 
Sbjct: 121 PMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPG 180

Query: 189 GVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHDLVV 244
            + T      + +VE  +     LK + +    +   VA  A FL SD ++YV+   + V
Sbjct: 181 LIDT----EMLAEVEHDL--DEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISV 234

Query: 245 DGG 247
           +GG
Sbjct: 235 NGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 59/198 (29%), Positives = 81/198 (40%), Gaps = 24/198 (12%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKA----SYRHC 62
             KVA++ GA+SGIG ATA+  A  G  V               +               
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF----------GTSRNPARAAPIPGVELLEL 52

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D+  V+  V   I + G +D++ +NAGV G  G   +  +AQ      TN+ G +  
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAGV-GLAGAAEESSIAQAQALFDTNVFGILRM 111

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPH----AYTISKHGLLGLVRSAASELGKH 178
            +     M A    G II      S+V G  P      Y  SKH + G   S   E+ + 
Sbjct: 112 TRAVLPHMRAQG-SGRII----NISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQF 166

Query: 179 GIRVNCVSPFGVATPFSA 196
           GIRV+ V P    T F A
Sbjct: 167 GIRVSLVEPAYTKTNFDA 184

Length = 270

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 27/247 (10%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           +  ++ GA  GIG A +   A  G  VI IA           S+I         CD+ D 
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIAR----------SAIDDFPGELFACDLADI 53

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           +Q   T+A   E +  +D + +N G+A P   +  +D+A        N+  +V   +   
Sbjct: 54  EQTAATLAQINEIHP-VDAIVNNVGIALP-QPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             M   + +G I+   S A   G     +Y+ +K  L+G  R+ A EL ++GI VN V+P
Sbjct: 112 EGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAP 169

Query: 188 -------FGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
                  F    P   G+  + E  V     ++ +    + VA A  FL SD++ +++G 
Sbjct: 170 GPIETELFRQTRP--VGS--EEEKRVLASIPMRRLG-TPEEVAAAIAFLLSDDAGFITGQ 224

Query: 241 DLVVDGG 247
            L VDGG
Sbjct: 225 VLGVDGG 231

Length = 234

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 34/262 (12%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVS------SIGP 54
           L+GKVA++ GA+ GIG A AK  A  GA V I      +  +E   ++ S      SIG 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 55  E-------KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ 107
                   +A Y   D   + +   T           DI+ +NAG+ GP   I +     
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGST---------KFDILINNAGI-GPGAFIEETTEQF 111

Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL 167
           FDR ++ N       ++ A   +  N     II  +S A+ +      AY+++K  +  +
Sbjct: 112 FDRMVSVNAKAPFFIIQQALSRLRDNS---RIINISSAATRISLPDFIAYSMTKGAINTM 168

Query: 168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEA 225
             + A +LG  GI VN + P  + T  +A  ++D  ++ +   ++    +  + + +A+ 
Sbjct: 169 TFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLG-EVEDIADT 227

Query: 226 ALFLASDESAYVSGHDLVVDGG 247
           A FLAS +S +V+G  + V GG
Sbjct: 228 AAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 6e-14
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 20/187 (10%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVR 65
            K  +I GA SG G   A   A  G   +IA      G Q+   +     +A+ R   +R
Sbjct: 2   SKTILITGAGSGFGREVALRLARKG-HNVIA------GVQIAPQVTALRAEAARRGLALR 54

Query: 66  DEKQVEETVAYAIEKYGSL--DIMYSNAGV--AGPVGTI-LDLDMAQFDRTIATNLAGSV 120
            EK ++ T A    +      D++ +NAG+  AG V  I ++L    F+    TN+ G +
Sbjct: 55  VEK-LDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFE----TNVFGPL 109

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              +   R MVA   +G ++ T+S A  + G    AY  SKH L  +  +  +EL   GI
Sbjct: 110 ELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGI 168

Query: 181 RVNCVSP 187
           +V  V+P
Sbjct: 169 QVATVNP 175

Length = 257

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 69.4 bits (170), Expect = 6e-14
 Identities = 59/201 (29%), Positives = 81/201 (40%), Gaps = 20/201 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQDEL---GNQVVSSIGPEKASYR 60
           L GK+A++ GA+ GIG   A    E GA V I    I  +L     ++ +  G  K    
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGG--KCIPV 58

Query: 61  HCDVRDEKQVEETVA-YAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQF--------DRT 111
            CD  D+ +VE      A E+ G LDI+ +NA     V  IL      F        D  
Sbjct: 59  RCDHSDDDEVEALFERVAREQQGRLDILVNNA--YAAVQLILVGVAKPFWEEPPTIWDDI 116

Query: 112 IATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSA 171
               L        YAA +MV    +G I+  +ST          AY + K  +  +    
Sbjct: 117 NNVGLRAHYACSVYAAPLMVKAG-KGLIVIISSTGGLEYLFNV-AYGVGKAAIDRMAADM 174

Query: 172 ASELGKHGIRVNCVSPFGVAT 192
           A EL  HG+ V  + P  V T
Sbjct: 175 AHELKPHGVAVVSLWPGFVRT 195

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.9 bits (166), Expect = 1e-13
 Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 20/248 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRHCD 63
           RL+GK   I+G + G+G A A    + GA V I    +    ++  ++       Y   D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAG--VAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           V   +     +  A +   ++D +    G  V   V      + +  +  +  ++   + 
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE-----EFSGLEEMLTNHIKIPLY 116

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGKHG 179
           AV  + R +      GS I   S+ S +  + P   +Y ++K GL   V   ASEL   G
Sbjct: 117 AVNASLRFLK----EGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRG 172

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           IRVN ++P  ++  F      + +    K+  L   +   +  A+  ++L +DE+ +V G
Sbjct: 173 IRVNGIAPTTISGDFEPE--RNWK----KLRKLGDDMAPPEDFAKVIIWLLTDEADWVDG 226

Query: 240 HDLVVDGG 247
             + VDGG
Sbjct: 227 VVIPVDGG 234

Length = 238

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 1e-13
 Identities = 68/242 (28%), Positives = 97/242 (40%), Gaps = 22/242 (9%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQV 70
           +++G +SGIG A A+ FA  GA V IA    +       ++G          D+ DE  V
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAV 60

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
           +   A A    G  D +   A    P G +  L +A     + +   G       A RV 
Sbjct: 61  DAFFAEA----GPFDHVVITA-ADTPGGPVRALPLAAAQAAMDSKFWG-------AYRVA 108

Query: 131 VANKIR--GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            A +I   GS+   +  A+    +           L  L R  A EL    +RVN VSP 
Sbjct: 109 RAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPG 166

Query: 189 GVATPFSAGTINDV--EGFVCKVANL-KGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
            V TP  +    D     F      L    V + + VA A LFLA   + + +G  ++VD
Sbjct: 167 LVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLVD 224

Query: 246 GG 247
           GG
Sbjct: 225 GG 226

Length = 230

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 77/263 (29%), Positives = 113/263 (42%), Gaps = 22/263 (8%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           +QGK  +IMG A+   I    AK  A  GA +      + LG +V     S+G +     
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFV--L 62

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLA 117
            CDV D   V+       +K+G LD +    G +      G   D     F RT+  +  
Sbjct: 63  PCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCF 122

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
                 K AA++M      GS++  T   ST      +   ++K  L   VR  A++ G 
Sbjct: 123 SFTEIAKRAAKLMPDG---GSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGP 179

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVE---GFVCKVANLKGIVLKAKHVAEAALFLASDES 234
            GIRVN +S   V T   AG I D      +  + + L+  V     V  +AL+L SD S
Sbjct: 180 QGIRVNAISAGPVRTLAGAG-IGDARAIFSYQQRNSPLRRTV-TIDEVGGSALYLLSDLS 237

Query: 235 AYVSGHDLVVDGGFTAVTNVMSM 257
           + V+G    VD G+    N++SM
Sbjct: 238 SGVTGEIHFVDSGY----NIVSM 256

Length = 271

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 10/190 (5%)

Query: 13  IMGAASGIGEATAKLFAEHGAFV-IIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           I GA+SGIG+A A+ +A  GA + ++A   D L           + S    DVRD   + 
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALA 66

Query: 72  ETVAYAIEKYGSLDIMYSNAGVAGPVGTIL----DLDMAQFDRTIATNLAGSVMAVKYAA 127
              A  I  +G  D++ +NAG++  VGT+     DL +  F   + TN  G V   +   
Sbjct: 67  AAAADFIAAHGLPDVVIANAGIS--VGTLTEEREDLAV--FREVMDTNYFGMVATFQPFI 122

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             M A + RG+++   S A   G  G  AY+ SK   +  + S   EL   G+RV  ++P
Sbjct: 123 APMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAP 181

Query: 188 FGVATPFSAG 197
             + TP +A 
Sbjct: 182 GYIRTPMTAH 191

Length = 257

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.3 bits (162), Expect = 5e-13
 Identities = 64/261 (24%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 5   RLQGKVAIIMGA--ASGIGEATAKLFAEHGA---FVIIADIQDEL--GNQVVSSI---GP 54
           +L+ KVA++ G     GIG A  K  AE GA   F        E+  G      I     
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 55  EKASYRHC-----DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
              +         D+      +E +    E+ G   I+ +NA  +       +L   + D
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNND-FSNLTAEELD 121

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
           +    N+  + +     AR     K  G II  TS        G  AY  +K  +  L  
Sbjct: 122 KHYMVNVRATTLLSSQFAR-GFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTS 180

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAAL 227
           S A+E+   GI VN ++P     P   G + +   +G +       G + + K  A    
Sbjct: 181 SLAAEVAHLGITVNAINP----GPTDTGWMTEEIKQGLLPMFP--FGRIGEPKDAARLIK 234

Query: 228 FLASDESAYVSGHDLVVDGGF 248
           FLAS+E+ +++G  +  +GGF
Sbjct: 235 FLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--HCDVRDEK 68
            +I GA+ GIG    +     G   +IA  +D      ++++G   +       DV DE 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 69  QVE-ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
               E VA  +     LD++ +NAG+    G   ++D          N+ G ++  + A 
Sbjct: 61  AESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ-AF 118

Query: 128 RVMVANKIRGSIICTTSTASTVG--GSGP-HAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             ++    R  II  +S   ++G   SG  ++Y  SK  L  L +S A EL + GI V  
Sbjct: 119 LPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVVS 178

Query: 185 VSPFGVAT 192
           + P  V T
Sbjct: 179 LHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 19/197 (9%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVI--------IADIQDELGNQVVSSIGPEKASY 59
            KV  I GA+ G G A  +   E G  V+        +AD+ ++ G++++          
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLP--------- 53

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV D   V   V  A+E +G LDI+ +NAG  G  G I ++  ++    I TN  G+
Sbjct: 54  LALDVTDRAAVFAAVETAVEHFGRLDIVVNNAG-YGLFGMIEEVTESEARAQIDTNFFGA 112

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +   +     +   +  G II  +S            Y  SK  L G+  + A E+ + G
Sbjct: 113 LWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFG 171

Query: 180 IRVNCVSPFGVATPFSA 196
           I+V  V P G +T ++ 
Sbjct: 172 IKVTLVEPGGYSTDWAG 188

Length = 275

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 14/184 (7%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDEK 68
           A++ GA+SGIG ATA   A  G  V +   + E   ++V  I  +  +A     DV D  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            V+  VA A E  G ++++ S AG     G + ++   QF+  +  +L G   A + A  
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYF-GKLHEISTEQFESQVQIHLVG---ANRLATA 128

Query: 129 V---MVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGKHGIRVN 183
           V   M+  + RG +I   S  +      PH  AY  +K GL  +V +   EL   G+R +
Sbjct: 129 VLPGMIERR-RGDLIFVGSDVALR--QRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRAS 185

Query: 184 CVSP 187
            V P
Sbjct: 186 IVHP 189

Length = 274

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 7/184 (3%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCD 63
            K+AI+ GA+SG G  T    A+ G  VI      + Q+ L +Q       +    +  D
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D+  +       +++ G +D++ +NAG A   G + ++ + ++ +   TN+ G++   
Sbjct: 63  VTDQNSI-HNFQLVLKEIGRIDLLVNNAGYANG-GFVEEIPVEEYRKQFETNVFGAISVT 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +     M   K  G II  +S +  VG  G   Y  SK+ L G   S   EL   GI V 
Sbjct: 121 QAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVA 179

Query: 184 CVSP 187
            + P
Sbjct: 180 LIEP 183

Length = 280

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 13/186 (6%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYRH 61
             K  +I G +SG G A A+     G  V+      A   D        ++ P++A  R 
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD------FEALHPDRALARL 56

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   ++  VA A   +G +D++ +NAG  G  G I +  +A+  R    N+ G+V 
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGY-GHEGAIEESPLAEMRRQFEVNVFGAVA 115

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             K     M A + RG I+  TS    +   G   Y  SK  L G+  S A E+   GI 
Sbjct: 116 MTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIH 174

Query: 182 VNCVSP 187
           V  V P
Sbjct: 175 VTAVEP 180

Length = 277

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 29/267 (10%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +V +++GA  GIG+A A+     G  V++AD  +E       ++       S +  DV  
Sbjct: 3   EVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDM-------AQFDRTIATNL 116
            + V+   A A +  G +  +   AGV+        IL +D+        +F + IA   
Sbjct: 61  RESVKALAATA-QTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTAS----------TVGGSGPHAYTISKHGLLG 166
           AG V+A +   R+      +   + TT T             +  S  HAY I+K     
Sbjct: 120 AGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSL-HAYQIAKRANAL 178

Query: 167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK---VANLKGIVLKAKHVA 223
            V + A + G+ G R+N +SP  ++TP +   +N   G   +     +  G       +A
Sbjct: 179 RVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIA 238

Query: 224 EAALFLASDESAYVSGHDLVVDGGFTA 250
             A FL     ++++G D +VDGG TA
Sbjct: 239 ALAEFLMGPRGSFITGSDFLVDGGATA 265

Length = 275

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 63.4 bits (155), Expect = 7e-12
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 26/198 (13%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-----DIQD--ELGNQVVSSIGPEKASY 59
           Q KVA++ GA+SGIG+ATA+  A  G  V  A      ++D   LG   +S         
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLS--------- 52

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV DE  ++  V   I + G +D++ +NAG  G  G I D+ + +  R    NL G+
Sbjct: 53  --LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGY-GSYGAIEDVPIDEARRQFEVNLFGA 109

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTAS---TVGGSGPHAYTISKHGLLGLVRSAASELG 176
               +     M A +  G II  +S      T  G+  HA   +K  L G   +   E+ 
Sbjct: 110 ARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHA---TKFALEGFSDALRLEVA 165

Query: 177 KHGIRVNCVSPFGVATPF 194
             GI V  + P G+ T +
Sbjct: 166 PFGIDVVVIEPGGIKTEW 183

Length = 273

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 56/199 (28%), Positives = 81/199 (40%), Gaps = 19/199 (9%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVI--------IADIQDELGNQVVSSIGPEKASY 59
            K   I GA+SG G    +     G  V         + D++   G+++   +       
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRL--WVLQ----- 54

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV D   V   V  A    G +D++ SNAG  G  G   +L  AQ  R I TNL GS
Sbjct: 55  --LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGY-GLFGAAEELSDAQIRRQIDTNLIGS 111

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +  ++ AA   +  +  G I+  +S    +   G   Y  +K G+ G V + A E+   G
Sbjct: 112 IQVIR-AALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFG 170

Query: 180 IRVNCVSPFGVATPFSAGT 198
           I    V P    T F AG 
Sbjct: 171 IEFTIVEPGPARTNFGAGL 189

Length = 276

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 4/200 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G   +I G  SGIG A A+ F E G  VII   ++E   +    +          DV 
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELP--NIHTIVLDVG 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-TILDLDMAQFDRTIATNLAGSVMAVK 124
           D + VE      + +Y +LDI+ +NAG+  P+       D+ + D  I TNL G +  +K
Sbjct: 61  DAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIK 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A    +  +   +I+  +S  + V  +    Y  +K  L     +   +L   G+ V  
Sbjct: 121 -AFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVE 179

Query: 185 VSPFGVATPFSAGTINDVEG 204
           + P  V T       N   G
Sbjct: 180 IVPPAVDTELHEERRNPDGG 199

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIGPEKASYRHCD 63
            L+ K  ++ GA+ GIG+A A+  A  GA +++     ++L         P +  +   D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           +  E   E  +A A  + G ++++ +NAGV      + D D    +R +A NL   +   
Sbjct: 62  LTSEAGREAVLARA-REMGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +    ++ A      ++   ST  ++G  G  +Y  SK  L G   +   EL   G+RV 
Sbjct: 120 RALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVL 178

Query: 184 CVSPFGVATPFSAGTIND 201
            ++P    T  ++  +  
Sbjct: 179 YLAPRATRTAMNSEAVQA 196

Length = 263

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 70/253 (27%), Positives = 109/253 (43%), Gaps = 20/253 (7%)

Query: 6   LQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
           L GK  ++MG A    I    A+   + GA VI    Q++   + +  +  E+     CD
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYT-YQNDRMKKSLQKLVDEEDLLVECD 63

Query: 64  VRDEKQVEETVAYAIEKYGSLD-----IMYSNAGVAGPVGTILDLDMAQFDRTIATNL-A 117
           V  ++ +E   A   E+ G +D     I Y+     G  G + D     +   +A ++ A
Sbjct: 64  VASDESIERAFATIKERVGKIDGIVHAIAYAKKEELG--GNVTDTSRDGYA--LAQDISA 119

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
            S++AV   AR ++      SI+  T   S       +   I+K  L   VR  A +LGK
Sbjct: 120 YSLIAVAKYARPLLNPG--ASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGK 177

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN---LKGIVLKAKHVAEAALFLASDES 234
            GIRVN +S   V T    G        + K ++   + G+ +  + V   A FL SD S
Sbjct: 178 KGIRVNAISAGAVKTLAVTGIKG--HKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLS 235

Query: 235 AYVSGHDLVVDGG 247
             V+G  + VD G
Sbjct: 236 TGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 71/262 (27%), Positives = 105/262 (40%), Gaps = 26/262 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA---DIQDELGNQVVSSIGPEKASYRH 61
            L GK  +I GA+ GIG A A+ FA  G  + +        E     + +      +   
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+   +  E+  A A    G +DI+ +NAG A P G + D+D A +       + G + 
Sbjct: 64  LDLSSPEAREQLAAEA----GDIDILVNNAG-AIPGGGLDDVDDAAWRAGWELKVFGYID 118

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI----SKHGLLGLVRSAASELGK 177
             + A   M A   RGS +      +   G  P A  I        L+   R+   +   
Sbjct: 119 LTRLAYPRMKA---RGSGVIVNVIGA--AGENPDADYICGSAGNAALMAFTRALGGKSLD 173

Query: 178 HGIRVNCVSPFGVATPFSAGTI--------NDVEGFVCKVANLK-GIVLKAKHVAEAALF 228
            G+RV  V+P  VAT      +         D   +   +A L  G     + VA+   F
Sbjct: 174 DGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAF 233

Query: 229 LASDESAYVSGHDLVVDGGFTA 250
           LAS  S Y SG  + VDGG +A
Sbjct: 234 LASPRSGYTSGTVVTVDGGISA 255

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 7e-11
 Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 36/270 (13%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKA 57
           M K  L GK+A    ++ GIG   A++ A  GA VI+    +E      + + S      
Sbjct: 1   MLKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDV 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
           SY   D+   + +E TV   ++  G  DI + + G   P G  +++ M  ++  +   L 
Sbjct: 61  SYIVADLTKREDLERTVK-ELKNIGEPDIFFFSTGGPKP-GYFMEMSMEDWEGAVKLLLY 118

Query: 118 GSVMAVKYAARVMVANKIR---GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
            +V    Y  R +V    R   G II +TS A            + +  + GLVR+ A E
Sbjct: 119 PAV----YLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKE 174

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK------AKHVAEAAL- 227
           LG  GI VN + P  + T       + V       A  +G  ++      AK +    L 
Sbjct: 175 LGPKGITVNGIMPGIIRT-------DRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLG 227

Query: 228 ----------FLASDESAYVSGHDLVVDGG 247
                     FLASD  +Y++G  + VDGG
Sbjct: 228 EPEEIGYLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 60.0 bits (145), Expect = 8e-11
 Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 26/253 (10%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA-------------DIQDELGNQVVSSIGPE 55
           ++A + G   GIG +  +   + G F ++A             + Q  LG   ++S G  
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDG-FKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG-- 60

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
                  +V D    +        + G +D++ +NAG+   V     +    +   I TN
Sbjct: 61  -------NVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDV-VFRKMTREDWTAVIDTN 112

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L       K     MV  +  G II  +S     G  G   Y+ +K G+ G   S A E+
Sbjct: 113 LTSLFNVTKQVIDGMV-ERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 171

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
              G+ VN VSP  + T        DV   +     ++ +      +     +LAS+ES 
Sbjct: 172 ATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGS-PDEIGSIVAWLASEESG 230

Query: 236 YVSGHDLVVDGGF 248
           + +G D  ++GG 
Sbjct: 231 FSTGADFSLNGGL 243

Length = 246

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 57.3 bits (138), Expect = 3e-10
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASY 59
           K +L GKVAI+ G   GIG  TA L A+ GA VI+ DI  E G   V  I   G E A +
Sbjct: 11  KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE-ALF 69

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV 93
              D+  +   +  ++  +  +  +D+++ NAG+
Sbjct: 70  VSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 73/258 (28%), Positives = 103/258 (39%), Gaps = 43/258 (16%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGNQVVSSIGPE--KASYRHCDV 64
           + A++ GAA  IG A A   A HG  V +     +DE    + + I     +A     D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADL 68

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL-AGSVMAV 123
            DE +V   VA A    G + ++ +NA +     +      A +DR +ATNL A  V+A 
Sbjct: 69  ADEAEVRALVARASAALGPITLLVNNASLFEY-DSAASFTRASWDRHMATNLRAPFVLAQ 127

Query: 124 KYA------ARVMVANKI--RGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAAS 173
            +A      AR +V N I  R            V    P   +YT+SK  L    R+ A 
Sbjct: 128 AFARALPADARGLVVNMIDQR------------VWNLNPDFLSYTLSKAALWTATRTLAQ 175

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFL 229
            L    IRVN + P G   P         E F           L      + +A A  +L
Sbjct: 176 ALAPR-IRVNAIGP-GPTLP---SGRQSPEDF---ARQHAATPLGRGSTPEEIAAAVRYL 227

Query: 230 ASDESAYVSGHDLVVDGG 247
               S  V+G  + VDGG
Sbjct: 228 LDAPS--VTGQMIAVDGG 243

Length = 258

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 66/256 (25%), Positives = 101/256 (39%), Gaps = 47/256 (18%)

Query: 24  TAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS 83
           TA+L    GA VI  D       +   ++      +   D+ D   ++  VA A+   G 
Sbjct: 1   TARLLRFLGARVIGVDR-----REPGMTL----DGFIQADLGDPASIDAAVA-ALP--GR 48

Query: 84  LDIMYSNAGVAGP-----VGTILDLDMAQFDRTIA---------TNLAGSVMAVKYAARV 129
           +D +++ AGV G      V  +  L +      +           N+A S+   ++  R+
Sbjct: 49  IDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVA-SLAGAEWPQRL 107

Query: 130 MVANKIRGSIICTTSTASTVGGSG---------PHAYTISKHGL-LGLVRSAASELGKHG 179
            +   +        +TAS   G+             Y +SK  L L  +R A    G  G
Sbjct: 108 ELHKAL-------AATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARG 160

Query: 180 IRVNCVSPFGVATPFSAGTINDVEG--FVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVNCV+P  V TP   G    + G   V   A   G    A   A   +FL SD + ++
Sbjct: 161 IRVNCVAPGPVFTPI-LGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWI 219

Query: 238 SGHDLVVDGGFTAVTN 253
           +G +L VDGG  A   
Sbjct: 220 NGVNLPVDGGLAATYI 235

Length = 241

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 21/198 (10%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-----ELGNQVVSSIGPEKASYR 60
           ++GKV ++ GA  GIG A  +     GA  + A  +D     +LG +VV    P +    
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVV----PLQL--- 56

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV D      +VA A E    + I+ +NAG+      +L+ D       + TN  G  
Sbjct: 57  --DVTDP----ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG-P 109

Query: 121 MAVKYA-ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +A+  A A V+ AN   G+I+   S  S V       Y+ SK     L ++  +EL   G
Sbjct: 110 LAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQG 168

Query: 180 IRVNCVSPFGVATPFSAG 197
            RV  V P  + T  +AG
Sbjct: 169 TRVLGVHPGPIDTDMAAG 186

Length = 238

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 24/207 (11%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSS 51
           M+   L+GKV +I G A  +G   A+  A  GA  +          AD ++ +    V +
Sbjct: 1   MADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVA--AVKA 58

Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAG--VAGPVGTILDLDMAQFD 109
            G +  +++  D+     VE+    A   +G  DI  +  G  +  P   I+++  A++D
Sbjct: 59  AGAKAVAFQ-ADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKP---IVEISEAEYD 114

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGL 167
              A N   +   +K A R +  N   G  I T  T S +G   P   AY  SK  +   
Sbjct: 115 EMFAVNSKSAFFFIKEAGRHLNDN---GK-IVTLVT-SLLGAFTPFYSAYAGSKAPVEHF 169

Query: 168 VRSAASELGKHGIRVNCVSPFGVATPF 194
            R+A+ E G  GI V  V P  + TPF
Sbjct: 170 TRAASKEFGARGISVTAVGPGPMDTPF 196

Length = 257

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 19/195 (9%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEK----ASYR---- 60
           K  +I G  SG G   AK     G F ++A    + G       G ++     S R    
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLG-FTVLAGCLTKNGP------GAKELRRVCSDRLRTL 53

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDI--MYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
             DV   +Q++    +  E  G   +  + +NAG+ G  G    L M  + + +  NL G
Sbjct: 54  QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           +V   K  A + +  + +G ++  +S    V      AY  SK  +     S   EL   
Sbjct: 114 TVEVTK--AFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPW 171

Query: 179 GIRVNCVSPFGVATP 193
           G++V+ + P    T 
Sbjct: 172 GVKVSIIEPGNFKTG 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSP----FGVATPFSAGTINDVEGFVCKVANL 212
           YT++KH L GL RSAA EL    IRVN V+P       A PF        E +  KV  L
Sbjct: 173 YTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQ-----EDYRRKVP-L 226

Query: 213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
                 A+ +A+  +FL S ++ Y++G  + VDGG +  
Sbjct: 227 GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT 265

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 71/260 (27%), Positives = 109/260 (41%), Gaps = 24/260 (9%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           + GK  +I+G A+   I    AK     GA +      D L  +V    + +G   A   
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAG-- 65

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
           HCDV DE  ++       +K+G LD +    G +      G  +D     F  T+  ++ 
Sbjct: 66  HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASEL 175
                 + A ++M      GSI+  T T        PH     ++K  L   V+  A +L
Sbjct: 126 SFTAVAQRAEKLMTDG---GSIL--TLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDL 180

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV----ANLKGIVLKAKHVAEAALFLAS 231
           G   IRVN +S   + T  +A  I D   ++ K     A L+  V   + V ++AL+L S
Sbjct: 181 GPKNIRVNAISAGPIKT-LAASGIGDFR-YILKWNEYNAPLRRTV-TIEEVGDSALYLLS 237

Query: 232 DESAYVSGHDLVVDGGFTAV 251
           D S  V+G    VD G+  V
Sbjct: 238 DLSRGVTGEVHHVDSGYHVV 257

Length = 272

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 5/192 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++ K  ++ GA  GIG+A  +    HGA  + A ++D      + +   +K      DV 
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D     E++  A  +   +D++ +NAGV  P   + +  +    + +  N+ G +   + 
Sbjct: 61  D----PESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQA 116

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            A V+ AN   G+I+   S AS         Y+ SK     L +   +EL   G  V  V
Sbjct: 117 FAPVLKANG-GGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSV 175

Query: 186 SPFGVATPFSAG 197
            P  + T  +AG
Sbjct: 176 HPGPIDTRMAAG 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 14/203 (6%)

Query: 9   KVAIIMGAASGIGEATAKLFA--EHGAFVIIADIQD-ELGNQVVSSIG---PEKASYRHC 62
            V +I G +SGIG   A   A      F + A ++D +   ++  + G            
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D K V   V    E    +D++  NAGV G +G +  L           N+ G+V  
Sbjct: 61  DVCDSKSVAAAVERVTE--RHVDVLVCNAGV-GLLGPLEALSEDAMASVFDVNVFGTVRM 117

Query: 123 VKYAARVMVANKIRGS--IICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           ++     +   K RGS  I+ T+S     G      Y  SK  L GL  S A +L    +
Sbjct: 118 LQ---AFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 181 RVNCVSPFGVATPFSAGTINDVE 203
            ++ +    V T F    +   E
Sbjct: 175 HLSLIECGPVHTAFMEKVLGSPE 197

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 18/202 (8%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDV 64
           G  A++ GA  GIG+A A+  A+ G  VI+     E  + V   I      +      D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 65  RDEKQVEETVAYAIEKYGSLDI--MYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVM 121
                + E +   +E    LDI  + +N G++  +    L+    +    I  N+  ++ 
Sbjct: 61  SAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGP----HAYTISKHGLLGLVRSAASELGK 177
             +     MV  K +G+I+      S+  G  P      Y+ SK  L    R+   E   
Sbjct: 118 MTRLILPGMVKRK-KGAIV----NISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKS 172

Query: 178 HGIRVNCVSPFGVATPFSAGTI 199
            GI V  + P+ VAT  S    
Sbjct: 173 QGIDVQSLLPYLVATKMSKIRK 194

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 54.4 bits (131), Expect = 9e-09
 Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 40/241 (16%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVI--------IADIQDELGNQVVSSIGPEKASYRH 61
           + ++ GA +G GE   + F + G  VI        + +++DELG+ +  +          
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---------Q 52

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ------FDRTIATN 115
            DVR+   +EE +A    ++ ++D++ +NAG+A      L L+ A       ++  I TN
Sbjct: 53  LDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLA------LGLEPAHKASVEDWETMIDTN 106

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK----HGLLGLVRSA 171
             G V   +     MV     G II   STA +   +G + Y  +K       L L    
Sbjct: 107 NKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL---- 161

Query: 172 ASELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
            ++L    +RV  + P  V  T FS       +G   K      + L  + V+EA  ++A
Sbjct: 162 RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ-NTVALTPEDVSEAVWWVA 220

Query: 231 S 231
           +
Sbjct: 221 T 221

Length = 248

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 4/190 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +  G   +I G ASGIG A AK F E G  VII    +E   +  +   PE  +   CDV
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHT-EVCDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-TILDLDMAQFDRTIATNLAGSVMAV 123
            D     E V +  ++Y +L+++ +NAG+      T  +  +   ++ IATNL   +   
Sbjct: 60  ADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLT 119

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
                 ++      +II  +S  + V  +    Y  +K  +     +   +L    + V 
Sbjct: 120 ALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVI 178

Query: 184 CVSPFGVATP 193
            ++P  V T 
Sbjct: 179 ELAPPLVDTT 188

Length = 245

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 8  GKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQ--DELGNQVVSSIGPEKASYRHCD 63
          GK  II GA +GIG+ TA+  A  GA VI+A  D+   +E   ++       +   RH D
Sbjct: 1  GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 64 VRDEKQVEETVAYAIEKYGSLDIMYSNAGV 93
          +   K +    A  + +   LD++ +NAGV
Sbjct: 61 LASLKSIRAFAAEFLAEEDRLDVLINNAGV 90

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 18/101 (17%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
           P   G+VA++ GA +G+G  TA   A  GA V++A    + G    + I    A+    D
Sbjct: 12  PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI---TAATPGAD 68

Query: 64  VRDEKQVEE----------TVAYAIEK-YGSLDIMYSNAGV 93
           V     ++E            A A+   Y  +D++ +NAGV
Sbjct: 69  V----TLQELDLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
            V +I G +SGIG A A  F +   + + A  +     + V ++     +    DV D  
Sbjct: 2   PVVLITGCSSGIGRALADAF-KAAGYEVWATARKA---EDVEALAAAGFTAVQLDVNDGA 57

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            +         ++G LD++ +NAG  G +G +LD  +    R   TN    V AV    R
Sbjct: 58  ALARLAEELEAEHGGLDVLINNAGY-GAMGPLLDGGVEAMRRQFETN----VFAVVGVTR 112

Query: 129 VMVA--NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            +     + RG ++   S +  +      AY  SK  +  L  +   EL   G++V  V 
Sbjct: 113 ALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172

Query: 187 PFGVATPFSA 196
           P  +A+ F++
Sbjct: 173 PGAIASQFAS 182

Length = 274

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)

Query: 83  SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICT 142
             D++  NA +    G ++DL  ++ +R I  N+ G+   ++ AAR ++  K  G  I  
Sbjct: 31  RRDVVVHNAAI-LDDGRLIDLTGSRIERAIRANVVGTRRLLE-AARELMKAKRLGRFILI 88

Query: 143 TSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV 202
           +S A   G  G   Y  SK  L GL +  ASE   +G+    V+    A    A      
Sbjct: 89  SSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPVAP 148

Query: 203 EGFVCKVANLKGIVLKAKHVAEAALFLA 230
           E  +          +  + VA A L   
Sbjct: 149 E-EILGNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYR--HCDVR 65
              +I GA+SG+G A AK  A  G + ++   +D L   Q    +G  K SY   HCD+ 
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK- 124
               V + V         LD +  NA V  P           F+ T+  N  G  +    
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNL 121

Query: 125 ---YAARVMVANK---IRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
                 R   A+    I GSI   T   +T+ G+ P   T+    L GL  
Sbjct: 122 LLEDLQRSENASPRIVIVGSI---THNPNTLAGNVPPRATLGD--LEGLAG 167

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 8  GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR----HCD 63
          GKV II GA SGIG  TA+ FA HGA VI+A       +  VS I  E    R      D
Sbjct: 1  GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 64 VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG 95
          +   + V+        K   L ++  NA V  
Sbjct: 61 LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFA 92

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 6/185 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           +  II G + G+GEA A    E G  VI     +      ++       ++   D++D  
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 69  QVE---ETVAYAIEKYGSLDI-MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           ++E     +  +I++     I + +NAG+  P+  I   +  +    +  NL   ++   
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE--LGKHGIRV 182
              +     K+   +I  +S A+     G  AY  SK GL    ++ A+E    ++ +++
Sbjct: 122 TFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKI 181

Query: 183 NCVSP 187
              SP
Sbjct: 182 VAFSP 186

Length = 251

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 9/188 (4%)

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
           E++ EE V   ++  G++D++ SN  +  P+  I     A   +            ++ A
Sbjct: 56  EQKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAA 115

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
              M      GSII  TS       +    Y  ++   + L  S A EL +  I V  + 
Sbjct: 116 IAQMKKAG-GGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIG 174

Query: 187 PFGVATP--FSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGH 240
           P    +P  F      +      +V   + + L    +   +     FLAS  +  ++G 
Sbjct: 175 PNFFNSPTYFPTSDWENNPELRERV--KRDVPLGRLGRPDEMGALVAFLASRRADPITGQ 232

Query: 241 DLVVDGGF 248
                GG+
Sbjct: 233 FFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK AI+ G  SG+G  T +  A+ GA VI+   + ++  + ++ I  +       D+ 
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI--DGVEVVMLDLA 81

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGV 93
           D + V       ++    +DI+ +NAGV
Sbjct: 82  DLESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDMAQFDRTIATNL-A 117
           CDV  ++Q++   A   + +  LD +  + G A      G  LD  +++ +  IA ++ A
Sbjct: 63  CDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLD-GLSRENFRIAHDISA 121

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
            S  A+  AA  M+++    S++  +   +       +   ++K  L   VR  A  LG 
Sbjct: 122 YSFPALAKAALPMLSDD--ASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGP 179

Query: 178 HGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
            GIR N +S   + T  +A  I D   +  FV   A L+  V   + V   A FL SD +
Sbjct: 180 KGIRANGISAGPIKT-LAASGIKDFGKILDFVESNAPLRRNV-TIEEVGNVAAFLLSDLA 237

Query: 235 AYVSGHDLVVDGGFTAVTNVMS 256
           + V+G    VD GF AV   M+
Sbjct: 238 SGVTGEITHVDSGFNAVVGGMA 259

Length = 260

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 44/275 (16%)

Query: 1   MSKPRLQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDE-------LGNQVVSS 51
                L GK  +++G A+   I    A+ F   GA + +  + D+       L  ++ + 
Sbjct: 3   QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAP 62

Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV----GTILDLDMAQ 107
           I      +   DVR+  Q+E   A   E++G LD +  +   A P     G ++D     
Sbjct: 63  I------FLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFA-PKEDLHGRVVDCSREG 115

Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG--PHAYTI---SKH 162
           F   +  +    +   + A  +M      GS++    T S  G      + Y +    K 
Sbjct: 116 FALAMDVSCHSFIRMARLAEPLM---TNGGSLL----TMSYYGAEKVVEN-YNLMGPVKA 167

Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA------NLKGIV 216
            L   VR  A+ELG  GIRV+ +SP  + T  ++G I+D +  +   A       L  I 
Sbjct: 168 ALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-IDDFDALLEDAAERAPLRRLVDI- 225

Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
                V   A FLASD +  ++G+ L +DGG+  V
Sbjct: 226 ---DDVGAVAAFLASDAARRLTGNTLYIDGGYHIV 257

Length = 258

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASY 59
             L  K  ++ GA+ G+GE  AK +A  GA VI+        +++ + +V +  PE  + 
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 60  RHCDVRDEKQVEETVAYAIEK--YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
           R   +  E++  E  A  I +   G LD +   AG    +  +    +A++      N  
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTV 121

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
              M +  A   ++      S+I    +      +    +  SK  L  L + AA E  +
Sbjct: 122 AP-MGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWER 180

Query: 178 HG-IRVNCVSPFGVATP 193
            G +R N + P  + +P
Sbjct: 181 FGNLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 47.9 bits (114), Expect = 9e-07
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 15/185 (8%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEK-ASYRHCDVRDEKQ 69
           A+I+GA  GIG A A+  A  G  ++++  +D      ++ +  E  A  R  DV  E +
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSG-RDA---GALAGLAAEVGALARPADVAAELE 56

Query: 70  VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV 129
           V        ++ G LD++   AG       +     A + R +  NL G+ + +K+ A  
Sbjct: 57  VWA----LAQELGPLDLLVYAAGAILG-KPLARTKPAAWRRILDANLTGAALVLKH-ALA 110

Query: 130 MVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG 189
           ++A   R   +        + G    AY  +K  L   V  A  E+   G+R+  V P  
Sbjct: 111 LLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLVRPPA 166

Query: 190 VATPF 194
           V T  
Sbjct: 167 VDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 32/268 (11%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--H 61
           ++GK  +I+G A+   I    AK   E GA +    + + L  + V  I  E  S     
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSDYVYE 61

Query: 62  CDVRDEKQVEETVAYAIEK-YGSLDIMYSNAGVA---GPVGTILDLDMAQFDRTIATNLA 117
            DV   +  + ++A +++K  G +D +  +   A      G+ L+     F+  +  ++ 
Sbjct: 62  LDVSKPEHFK-SLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG--PH--AYTISKHGLLGLVRSAAS 173
             +   +    ++       S++    T S +GG    PH     ++K  L   VR  A 
Sbjct: 121 SLIELTRALLPLLNDG---ASVL----TLSYLGGVKYVPHYNVMGVAKAALESSVRYLAV 173

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV----ANLKGIVLKAKHVAEAALFL 229
           +LGK GIRVN +S   + T  ++G I D    + K     A LK  V   + V  + ++L
Sbjct: 174 DLGKKGIRVNAISAGPIKTLAASG-IGDFR-MILKWNEINAPLKKNV-SIEEVGNSGMYL 230

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNVMSM 257
            SD S+ V+G    VD G+    N+M M
Sbjct: 231 LSDLSSGVTGEIHYVDAGY----NIMGM 254

Length = 274

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 17/189 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCDV 64
           +  +I GA+SG+G   A+ FA  G  + +     D  +EL  ++++     K +    DV
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFD---RTIATNLAGS 119
            D  QV E  A   ++ G LD +  NAG+     +GT       +F     T  TN   +
Sbjct: 63  NDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGT------GKFWANKATAETNFVAA 116

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGKH 178
           +   + A  +       G ++  +S ++  G  G   AY  SK G+  L     +EL K 
Sbjct: 117 LAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKT 175

Query: 179 GIRVNCVSP 187
            I+V+ + P
Sbjct: 176 PIKVSTIEP 184

Length = 248

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 16/255 (6%)

Query: 6   LQGKVAIIMGAAS------GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY 59
           LQGK  +I G  S      GI +A  +  AE  AF  + D  +E   ++ + +  E   +
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAEL-AFTYVVDKLEERVRKMAAELDSELV-F 61

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDMAQFDRTIATNL 116
           R CDV  + ++ +  A   + +  LD +  + G A      G  LD    +   T     
Sbjct: 62  R-CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEIS 120

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
           A S+ A+  AAR M+  +   +I+  +   +       +   ++K  L   +R  A+ LG
Sbjct: 121 AYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG 179

Query: 177 KHGIRVNCVSPFGVATPFSAGT--INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           K GIR N +S   + T  ++G      + G V     L+  V   + V   A FL SD S
Sbjct: 180 KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNV-TIEEVGNTAAFLLSDLS 238

Query: 235 AYVSGHDLVVDGGFT 249
           + ++G    VDGG++
Sbjct: 239 SGITGEITYVDGGYS 253

Length = 261

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 22/266 (8%)

Query: 1   MSKPRLQGKVAIIMGAAS--GIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIGPE 55
           M+   LQGK  +I G A+   I  A A+L  +HGA   F   +++ ++    +   IG  
Sbjct: 1   MTTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCN 60

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTI 112
             S    DV + K +        EK+GS D +      A      G  +D  +  F  ++
Sbjct: 61  FVS--ELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSL 118

Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA 172
             +   S++ +  +A  ++ +   GSI+  T   +       +   ++K  L   V+  A
Sbjct: 119 HISCY-SLLELSRSAEALMHDG--GSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLA 175

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV---CKVANLKGIVLKAKHVAEAALFL 229
           +++G++ IRVN +S   + T  ++  I D    +      A LK    + + V  AA++L
Sbjct: 176 NDMGENNIRVNAISAGPIKT-LASSAIGDFSTMLKSHAATAPLKRNTTQ-EDVGGAAVYL 233

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNVM 255
            S+ S  V+G    VD G+    N+M
Sbjct: 234 FSELSKGVTGEIHYVDCGY----NIM 255

Length = 260

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 25/197 (12%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA-----DIQ--DELGNQVVSSIGPEKASYRH 61
           K  +I G +SGIG   A      G  V+ A     D+   + LG   +            
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGIL----------- 51

Query: 62  CDVRDEKQVEETVAYAIE-KYGSLDIMYSNAG--VAGPVGTILDLDMAQFDRTIATNLAG 118
            D+ D + VE      I      L  +++NAG  V GP+ TI      Q ++  +TN  G
Sbjct: 52  LDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTI---SRQQMEQQFSTNFFG 108

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           +          M+ +   G I+ T+S    +   G  AY  SK+ L     +   EL   
Sbjct: 109 THQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHS 167

Query: 179 GIRVNCVSPFGVATPFS 195
           GI+V+ + P  + T F+
Sbjct: 168 GIKVSLIEPGPIRTRFT 184

Length = 256

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGN-QVVSSIGPEKAS 58
           G V ++ G A GIG A A+  A      ++         + + +      + ++G     
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR-VL 263

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
           Y   DV D   V   +    E+YG++D +   AGV      +       F+  +A  + G
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGV-LRDALLAQKTAEDFEAVLAPKVDG 322

Query: 119 SV 120
            +
Sbjct: 323 LL 324

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 6  LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI--GPEKASYRHC 62
          L GK A++ G++ GIG  TAK+ A  GA V++   Q     N+VV+ I     +AS    
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 63 DVRDEKQVEETVAYAIEKYGSLDIMYSNA 91
          D+ DE+ V   +  A E++G LD +  NA
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 75/300 (25%), Positives = 119/300 (39%), Gaps = 47/300 (15%)

Query: 1   MSKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIA------------------DI 40
           M K  L GK+A I G     G G   AK  AE GA +++                   D 
Sbjct: 1   MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDA 60

Query: 41  QDELGN---QVVSSIGPEKASYRH-----CDVRDEKQVEET-------VAYAIEK-YGSL 84
             +L N      + I P  AS+        ++R+ K+ ++        VA  ++K +G +
Sbjct: 61  SRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHI 120

Query: 85  DIM-YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT 143
           DI+ +S A        +L+     +   ++T+    V  + +   +M      GS I  T
Sbjct: 121 DILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG---GSTISLT 177

Query: 144 STAS--TVGGSGPHAYTISKHGLLGLVRSAASELG-KHGIRVNCVS--PFGVATPFSAGT 198
             AS   V G G    + +K  L    +  A E G + GIRVN +S  P       + G 
Sbjct: 178 YLASMRAVPGYG-GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF 236

Query: 199 INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSML 258
           I  +  +    A L    ++A+ V  AA FL S  ++ ++G  L VD G   +     M 
Sbjct: 237 IERMVDYYQDWAPLPE-PMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEMF 295

Length = 299

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 52/209 (24%), Positives = 72/209 (34%), Gaps = 55/209 (26%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCDVR 65
             +I GA SGIG+  A  +A+ G  VI       + DEL  Q  ++I          DV 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS-ANIFTLAF-----DVT 56

Query: 66  DEKQVEETVAYAIEKYGSL----DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           D    +  ++        L    ++   NAG           D    D           +
Sbjct: 57  DHPGTKAALS-------QLPFIPELWIFNAG-----------DCEYMD--------DGKV 90

Query: 122 AVKYAARVM------VANKIRGS---------IICTTSTASTVGGSGPHAYTISKHGLLG 166
                ARV       VAN I G          ++   S AS +      AY  SK  +  
Sbjct: 91  DATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAY 150

Query: 167 LVRSAASELGKHGIRVNCVSPFGVATPFS 195
             R+   +L   GI V  V P  VATP +
Sbjct: 151 FARTLQLDLRPKGIEVVTVFPGFVATPLT 179

Length = 240

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 17/190 (8%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
            +V ++ G    +G A  + F   G +V   D+  E      S I  +  S         
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLA-ENEEADASIIVLDSDS----FTEQA 55

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVG--TILDLDMAQFDRTIATNLAGSVMAVKY 125
           KQV  +VA      G +D +   AG  G  G        +  +D     NL  S +A   
Sbjct: 56  KQVVASVA---RLSGKVDALICVAG--GWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KHGIRVN 183
           A + +++    G ++ T + A+     G   Y  +K  +  L +S A+E      G   N
Sbjct: 111 ATKHLLSG---GLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTAN 167

Query: 184 CVSPFGVATP 193
            + P  + TP
Sbjct: 168 AILPVTLDTP 177

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 219

Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE 259
           +  + V  +A FL SD SA +SG  + VDGGF+     M+ LE
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAA--MNELE 260

Length = 262

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 15/154 (9%)

Query: 12  IIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYR--HCDVRDEK 68
           II GA+SG+G ATAK  AE G   V++A        +   S G  K SY   H D+    
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD 60

Query: 69  QVEETVAYAIEKYG-SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
            V + V     + G  LD++  NA V  P           F+ ++ TN  G  +  +   
Sbjct: 61  SVRQFVD-NFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLL 119

Query: 128 RVMVANK-------IRGSIICTTSTASTVGGSGP 154
             +  +        I GSI   T   +T+ G+ P
Sbjct: 120 DDLKKSDYPSKRLIIVGSI---TGNTNTLAGNVP 150

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 42.9 bits (101), Expect = 8e-05
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYR--HC 62
            Q    II GA+SG+G   AK  A  G + +I   +D     Q   S+G  K SY   H 
Sbjct: 1   QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHL 60

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
           D+     V + V    E    LD +  NA V  P           F+ ++ TN  G
Sbjct: 61  DLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLG 116

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 47/187 (25%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           +++GA+  IG A     ++               ++V++      A     DV+ +    
Sbjct: 4   LVIGASGTIGRAVVAELSKR--------------HEVIT------AGRSSGDVQVDITDP 43

Query: 72  ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV 131
            ++    EK G +D + S AG       + ++    F+  + + L G V  V      + 
Sbjct: 44  ASIRALFEKVGKVDAVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN 102

Query: 132 ANKIRGSIICTT-----------STASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
                GS   T+           ++A+TV G            L G V++AA EL + GI
Sbjct: 103 DG---GSFTLTSGILSDEPIPGGASAATVNG-----------ALEGFVKAAALELPR-GI 147

Query: 181 RVNCVSP 187
           R+N VSP
Sbjct: 148 RINVVSP 154

Length = 199

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 19/189 (10%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
             A+I GA+ GIG A A+  A     ++     + L +++ + +    A+    D+ D  
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERL-DELAAEL--PGATPFPVDLTD-- 58

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV---MAVKY 125
              E +A A+E+ G LD++  NAGVA   G + +  + ++  T+  N+         +  
Sbjct: 59  --PEAIAAAVEQLGRLDVLVHNAGVADL-GPVAESTVDEWRATLEVNVVAPAELTRLLLP 115

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS-AASELGKHGIRVNC 184
           A R        G ++   S A      G  +Y  SK  L  L  +    E G   +RV  
Sbjct: 116 ALRAA-----HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN--VRVTS 168

Query: 185 VSPFGVATP 193
           V P    T 
Sbjct: 169 VHPGRTDTD 177

Length = 227

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGA--FVII------ADIQDELGNQVVSSIGPEKASYR 60
              +I G   G+G A A+  AE GA   V++      A     L  ++ ++    + +  
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG--ARVTVV 58

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLD-IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
            CDV D   +   +A      G L  ++++ AGV    G +  L   +F   +A   AG+
Sbjct: 59  ACDVADRDALAAVLAAIPAVEGPLTGVIHA-AGVLDD-GVLASLTPERFAAVLAPKAAGA 116

Query: 120 V 120
            
Sbjct: 117 W 117

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 25/208 (12%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           +  +I G +SGIG   A+     G + + A  + E   + V+++  E       D  + +
Sbjct: 5   RSILITGCSSGIGAYCARALQSDG-WRVFATCRKE---EDVAALEAEGLEAFQLDYAEPE 60

Query: 69  QVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSVMAV 123
            +   VA  +E   G LD +++N G  G  G + DL      AQF+     N  G     
Sbjct: 61  SIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFE----ANFFGWHDLT 115

Query: 124 KYAARVMVANKIRGSII-CTTSTASTVGGSGPH----AYTISKHGLLGLVRSAASELGKH 178
           +    VM     +G I+ C     S++ G  P     AY  SK  + GL  +   EL   
Sbjct: 116 RRVIPVMRKQG-QGRIVQC-----SSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGS 169

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFV 206
           GI V+ + P  + T F A  +   + ++
Sbjct: 170 GIHVSLIEPGPIETRFRANALAAFKRWI 197

Length = 277

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 8  GKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCD 63
          G+  +I GA SGIG+A A   A+ G  V +        +E   ++ +  G +       D
Sbjct: 1  GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 64 VRDEKQVEETVAYAIEKYGSLDIMYSNAG 92
          + D KQV E V    E+   L ++ +NAG
Sbjct: 61 MSDPKQVWEFVEEFKEEGKKLHVLINNAG 89

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 26/180 (14%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSIG 53
           + P       +I G   G+G   A+  A  GA  ++                  ++ + G
Sbjct: 144 AAPGGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARA--ALLRAGG 201

Query: 54  PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
               S   CDV D   +   +A  +   G L  +   AGV      + +L  A F     
Sbjct: 202 AR-VSVVRCDVTDPAALAALLA-ELAAGGPLAGVIHAAGVLRD-ALLAELTPAAFAA--- 255

Query: 114 TNLAGSVMAVKYAARVMVANKIRGS----IICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
                 V+A K A  + +            +  +S A+ +GG+G  AY  +   L  L  
Sbjct: 256 ------VLAAKVAGALNLHELTPDLPLDFFVLFSSVAALLGGAGQAAYAAANAFLDALAA 309

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 39.5 bits (92), Expect = 9e-04
 Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 38/193 (19%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           ++ G A  IG    +     G  V   D       +           +   D+ D   V+
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDR-----LRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 72  ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV 131
           E            D +   A  +    +            +  N+ G++  ++ A    V
Sbjct: 59  ELAKGVP------DAVIHLAAQSSVPDSNAS----DPAEFLDVNVDGTLNLLEAARAAGV 108

Query: 132 ANKIRGSIICTTSTASTVGGSGPH--------------AYTISKHGLLGLVRSAASELGK 177
              +        S+ S V G  P                Y +SK     L+R+ A     
Sbjct: 109 KRFV------FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL--- 159

Query: 178 HGIRVNCVSPFGV 190
           +G+ V  + PF V
Sbjct: 160 YGLPVVILRPFNV 172

Length = 314

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 16/196 (8%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           G  A++ G   GIG+  A   A  G   V++A   D+L + V  SI   ++ Y    ++ 
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD-VSDSI---QSKYSKTQIKT 108

Query: 67  -----EKQVEETVAYAIEKYGSLD--IMYSNAGVAGPVGTIL-DLDMAQFDRTIATNLAG 118
                   ++E V    E    LD  ++ +N GV+ P      ++D       I  N+ G
Sbjct: 109 VVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEG 168

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELG 176
           +    +     M+  K +G+II   S A+ V  S P    Y  +K  +    R    E  
Sbjct: 169 TTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK 227

Query: 177 KHGIRVNCVSPFGVAT 192
           K GI V C  P  VAT
Sbjct: 228 KSGIDVQCQVPLYVAT 243

Length = 320

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 169 RSAASELG-KHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           R  A E G K+ IRVN +S  P G     + G I+D+  +    A L+   L A  V  A
Sbjct: 205 RVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQK-ELTADEVGNA 263

Query: 226 ALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           A FLAS  ++ ++G  + VD G     N M +
Sbjct: 264 AAFLASPLASAITGATIYVDNGL----NAMGL 291

Length = 303

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 14/169 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           K  +I+GA+ GIG    + +   G  V IA  +D      + ++G E  +    DV D  
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRV-IATARDAAALAALQALGAEALA---LDVADPA 57

Query: 69  QVEETVAYAIEKYG-SLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
            V      A +  G +LD     AGV GP    +  +    FD  + TN+ G +  +   
Sbjct: 58  SVA---GLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPIL 114

Query: 127 ARVMVANKIRGSIICTTSTASTVG---GSGPHAYTISKHGLLGLVRSAA 172
             ++ A    G +   +S   ++G   G+    Y  SK  L   +R+A+
Sbjct: 115 LPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAAS 161

Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	262
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK08177	225	short chain dehydrogenase; Provisional	99.98
PRK08017	256	oxidoreductase; Provisional	99.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.98
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02583	297	cinnamoyl-CoA reductase	99.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.88
PLN02653	340	GDP-mannose 4,6-dehydratase	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.87
PRK06720	169	hypothetical protein; Provisional	99.87
PLN02572	442	UDP-sulfoquinovose synthase	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.87
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.87
PLN00198	338	anthocyanidin reductase; Provisional	99.87
PLN02650	351	dihydroflavonol-4-reductase	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.85
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.85
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.85
PLN02214	342	cinnamoyl-CoA reductase	99.85
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.85
PLN02240	352	UDP-glucose 4-epimerase	99.84
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.83
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.83
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.83
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.81
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.81
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.81
PLN02427	386	UDP-apiose/xylose synthase	99.81
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.8
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.8
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.79
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.78
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.77
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.77
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.77
PLN02260	668	probable rhamnose biosynthetic enzyme	99.75
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.74
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.73
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.72
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.72
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.72
PLN02206	442	UDP-glucuronate decarboxylase	99.72
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.71
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.71
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.69
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.69
CHL00194	317	ycf39 Ycf39; Provisional	99.68
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.65
PRK07201	657	short chain dehydrogenase; Provisional	99.61
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.6
PRK05865	854	hypothetical protein; Provisional	99.6
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.6
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.59
PLN02996	491	fatty acyl-CoA reductase	99.58
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.55
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.54
PLN02778	298	3,5-epimerase/4-reductase	99.5
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.49
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.47
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.44
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.42
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.42
PLN00016	378	RNA-binding protein; Provisional	99.42
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.41
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.4
PRK08309	177	short chain dehydrogenase; Provisional	99.38
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.36
PRK12320	699	hypothetical protein; Provisional	99.35
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.33
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.29
PLN02260	668	probable rhamnose biosynthetic enzyme	99.29
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.29
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.27
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.27
PLN02503	605	fatty acyl-CoA reductase 2	99.18
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.06
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.93
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.9
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.87
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.77
COG2910	211	Putative NADH-flavin reductase [General function p	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.74
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.72
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.7
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.69
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.6
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.55
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.5
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.49
PLN00106	323	malate dehydrogenase	98.48
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.45
PRK09620	229	hypothetical protein; Provisional	98.39
PTZ00325	321	malate dehydrogenase; Provisional	98.37
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.36
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.34
KOG2774	366	consensus NAD dependent epimerase [General functio	98.32
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.28
PRK14982	340	acyl-ACP reductase; Provisional	98.2
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.04
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.8
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.78
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.73
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.73
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.72
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.7
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.64
PRK05086	312	malate dehydrogenase; Provisional	97.62
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.61
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.61
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.56
PRK06849	389	hypothetical protein; Provisional	97.53
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.51
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.49
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.4
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.38
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.37
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.37
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.36
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.35
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.34
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.31
COG3268	382	Uncharacterized conserved protein [Function unknow	97.3
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.29
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.28
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.27
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.22
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.18
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.13
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.12
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.09
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.08
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.05
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.05
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.05
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.04
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.01
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.01
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.0
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.98
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.97
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.96
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.95
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.94
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.93
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.92
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.92
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.9
PLN00203	519	glutamyl-tRNA reductase	96.88
PRK09496	453	trkA potassium transporter peripheral membrane com	96.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.85
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.83
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.83
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.83
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.8
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.78
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.76
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.74
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.72
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.7
PTZ00117	319	malate dehydrogenase; Provisional	96.69
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.68
PRK04148	134	hypothetical protein; Provisional	96.65
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.64
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.64
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.63
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.63
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.62
PLN02602	350	lactate dehydrogenase	96.62
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.58
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.55
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.54
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.51
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.49
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.46
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.44
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.42
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.4
PRK05442	326	malate dehydrogenase; Provisional	96.39
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.38
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.36
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.35
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.32
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.3
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.27
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.25
PLN02928	347	oxidoreductase family protein	96.22
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.18
PRK12480	330	D-lactate dehydrogenase; Provisional	96.15
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.14
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.11
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.1
PRK14968	188	putative methyltransferase; Provisional	96.1
PRK09496	453	trkA potassium transporter peripheral membrane com	96.08
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.08
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.04
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.04
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.01
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.01
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.0
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.0
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.99
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.91
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.85
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.85
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PRK08655	437	prephenate dehydrogenase; Provisional	95.84
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.83
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.83
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.8
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.8
PRK13243	333	glyoxylate reductase; Reviewed	95.8
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.79
PLN02740	381	Alcohol dehydrogenase-like	95.79
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.78
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.78
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.76
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.76
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.73
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.71
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.66
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.66
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.65
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.65
PRK06223	307	malate dehydrogenase; Reviewed	95.63
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.6
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.6
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.57
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.55
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.5
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.48
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.47
PTZ00354	334	alcohol dehydrogenase; Provisional	95.47
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.46
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.45
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.42
PLN02494	477	adenosylhomocysteinase	95.41
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.4
PRK06932	314	glycerate dehydrogenase; Provisional	95.39
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.38
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.37
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.37
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.35
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.35
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.34
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.33
PRK08223	287	hypothetical protein; Validated	95.29
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.27
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.25
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.25
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.23
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.22
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.21
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.2
PRK07574	385	formate dehydrogenase; Provisional	95.18
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.14
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.13
PLN03139	386	formate dehydrogenase; Provisional	95.12
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.11
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.08
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.07
PLN02827	378	Alcohol dehydrogenase-like	95.07
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.06
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.05
PRK10669	558	putative cation:proton antiport protein; Provision	95.05
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.03
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.02
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.02
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.02
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
PLN02306	386	hydroxypyruvate reductase	95.0
PRK06436	303	glycerate dehydrogenase; Provisional	94.99
PRK06487	317	glycerate dehydrogenase; Provisional	94.98
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.95

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=4.4e-50  Score=305.16  Aligned_cols=243  Identities=35%  Similarity=0.506  Sum_probs=220.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +..|.++||||++|||++++..|+++|++|++++++.+..++....++. .+...+.||++++.+++..+++..+.++++
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999999999999999988888888865 567789999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +++|||||+. ....+..+..++|.+.+.+|+.|.|+++|++.+.|...+. ..+||++||+-+..+.-+...|+++|++
T Consensus        92 svlVncAGIt-rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G  170 (256)
T KOG1200|consen   92 SVLVNCAGIT-RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG  170 (256)
T ss_pred             cEEEEcCccc-cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence            9999999997 4467778999999999999999999999999999654332 4499999999999998899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.+|+|++|+|++++|||||+++||++.|||+....+...+.... ..|.+|+..+||||..++||+|+.+.|+||+.+.
T Consensus       171 vIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~-~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~e  249 (256)
T KOG1200|consen  171 VIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILG-MIPMGRLGEAEEVANLVLFLASDASSYITGTTLE  249 (256)
T ss_pred             eeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHc-cCCccccCCHHHHHHHHHHHhccccccccceeEE
Confidence            999999999999999999999999999999998776665544444 3588999999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+.|
T Consensus       250 vtGGl~m  256 (256)
T KOG1200|consen  250 VTGGLAM  256 (256)
T ss_pred             EeccccC
Confidence            9999854

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-49  Score=330.19  Aligned_cols=248  Identities=26%  Similarity=0.299  Sum_probs=217.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |.+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.   ..++.++++|++|+++++++++++
T Consensus         1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          1 MLKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             CCccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999999999888777766653   246889999999999999999998


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      . +++++|++|||+|.. ...++.+.+.++|.+++++|+.+++.+++.++|+|++++ .|+||++||..+..+.+....|
T Consensus        81 ~-~~g~iD~lv~nag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y  157 (263)
T PRK08339         81 K-NIGEPDIFFFSTGGP-KPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALS  157 (263)
T ss_pred             H-hhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhh
Confidence            6 589999999999976 346778899999999999999999999999999998876 7999999999999888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +++|+|+.+|+++++.|++++|||||+|+||+++|++......          +..........|.+++.+|+|+++++.
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~  237 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVA  237 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999997532110          111111122347788999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCcccc
Q 024839          228 FLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ||+++.+.++||+++.+|||+.++
T Consensus       238 fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        238 FLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHhcchhcCccCceEEECCCcccc
Confidence            999999999999999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-48  Score=323.67  Aligned_cols=245  Identities=27%  Similarity=0.304  Sum_probs=210.1

Q ss_pred             CCCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ||. .+++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++...++.++++|++++++++++++++.
T Consensus         1 ~~~-~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          1 MSG-ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             Ccc-ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHH
Confidence            443 4889999999999  7999999999999999999999984 44444444444567899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           79 EKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      ++++++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   .|+||+++|..+..+.+.+.
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~  155 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAIPNYN  155 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccCCcch
Confidence            999999999999997632   257788999999999999999999999999999853   58999999999988888889


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +|++||+|+.+|+++|+.|++++||+||+|+||+++|++......... ........|.+++.+|+||++++.||+++++
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~  235 (252)
T PRK06079        156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLS  235 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999998644321111 1111223467889999999999999999999


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .++||+++.+|||+++
T Consensus       236 ~~itG~~i~vdgg~~~  251 (252)
T PRK06079        236 TGVTGDIIYVDKGVHL  251 (252)
T ss_pred             ccccccEEEeCCceec
Confidence            9999999999999865

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-48  Score=320.81  Aligned_cols=248  Identities=30%  Similarity=0.405  Sum_probs=212.1

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |.++++.+|++|||||++|||+++|++|+++|++|++++|+... ..+..+..+ .++.++++|++++++++++++++.+
T Consensus         1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          1 MQLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALG-RKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            45567889999999999999999999999999999999886432 222222222 4688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++..|+||++||..+..+.+....|++
T Consensus        80 ~~g~iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~a  158 (251)
T PRK12481         80 VMGHIDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTA  158 (251)
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHH
Confidence            999999999999986 4467788999999999999999999999999999987653589999999999888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......... ........|.++..+|+|+++++.||+++.+.+++
T Consensus       159 sK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~  238 (251)
T PRK12481        159 SKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVT  238 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcC
Confidence            99999999999999999999999999999999998654321111 11111234678899999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |++|.+|||+.+
T Consensus       239 G~~i~vdgg~~~  250 (251)
T PRK12481        239 GYTLAVDGGWLA  250 (251)
T ss_pred             CceEEECCCEec
Confidence            999999999764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.6e-48  Score=322.90  Aligned_cols=244  Identities=29%  Similarity=0.327  Sum_probs=205.6

Q ss_pred             CCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHH---HHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQ---VVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +..+++|++|||||++  |||+++|++|+++|++|++++|+.+..++   +.++.+  ...++++|++|+++++++++++
T Consensus         2 ~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g--~~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          2 EGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG--SDFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC--CceEEeCCCCCHHHHHHHHHHH
Confidence            3457899999999997  99999999999999999999987543322   222222  2357899999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|++|||||+...   ..++.+.+.++|.+++++|+.+++.++++++|+|.+   .|+||+++|..+..+.+.+
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~  156 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVMPNY  156 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccCCcc
Confidence            9999999999999997532   146778999999999999999999999999999962   4899999999998888888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      .+|+++|+|+.+|+++|+.|++++|||||+|+||+++|++.....+.... .......|.+++.+|+|++++++||+++.
T Consensus       157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999986433221111 11112346788899999999999999999


Q ss_pred             CCceeceEEeeCCCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~  251 (262)
                      +.++||++|.+|||+.+.
T Consensus       237 ~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        237 SSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             ccccCceEEeecCCcccC
Confidence            999999999999998754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.8e-47  Score=301.43  Aligned_cols=230  Identities=33%  Similarity=0.396  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..+++|+++|||||||||.++|++|+++|++|++++|+.++++++.+++....+..+..|++|.++++.+++.+.+++++
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            34678999999999999999999999999999999999999999999998778999999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||.. ...++.+.+.++|.+|+++|+.|.++.+++++|.|.+++ .|.||++||+++..+.++.+.|+++|++
T Consensus        82 iDiLvNNAGl~-~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          82 IDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             ccEEEecCCCC-cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhHHH
Confidence            99999999987 558999999999999999999999999999999999998 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +..|++.|..|+..++|||..|.||.+.|+.+.....+...............++|+|||+.++|.++.+..
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999999776554443332222222111235578999999999999987754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-47  Score=321.00  Aligned_cols=241  Identities=20%  Similarity=0.232  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+.+   ..+++.++++. . .++++|++|+++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            4679999999997  89999999999999999999998853   33333344432 3 6789999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|.|.+   .|+||++||..+..+.+.+..
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~~~~~~  156 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYVPHYNV  156 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCCCcchh
Confidence            99999999999997532   256788999999999999999999999999999954   479999999999888888899


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++.....+... ........|.++..+|+|+++++.||+++.+.
T Consensus       157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~  236 (274)
T PRK08415        157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSS  236 (274)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999999999999999987543211111 01111234778899999999999999999999


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ++||+.+.+|||+.+
T Consensus       237 ~itG~~i~vdGG~~~  251 (274)
T PRK08415        237 GVTGEIHYVDAGYNI  251 (274)
T ss_pred             cccccEEEEcCcccc
Confidence            999999999999876

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-47  Score=315.74  Aligned_cols=246  Identities=32%  Similarity=0.455  Sum_probs=212.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..  .++..+++|++++++++++++++.+
T Consensus         3 ~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          3 DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            44568899999999999999999999999999999999998887777666532  4678899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-C-CCccc
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-S-GPHAY  157 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~-~~~~Y  157 (262)
                      .++++|++|||||.. ...++.+.+.++|.+++++|+.+++.++++++|.|.+++..++||++||..+..+. + ....|
T Consensus        83 ~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y  161 (253)
T PRK05867         83 ELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHY  161 (253)
T ss_pred             HhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccch
Confidence            999999999999986 45677888999999999999999999999999999876535799999998876432 2 45789


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++|+|+++|+++++.|++++||+||+|+||+++|++....... .... ....|.+++.+|+||+++++||+++.+.++
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-~~~~-~~~~~~~r~~~p~~va~~~~~L~s~~~~~~  239 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-QPLW-EPKIPLGRLGRPEELAGLYLYLASEASSYM  239 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-HHHH-HhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999999987543221 1111 223467889999999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      ||+.|.+|||+++
T Consensus       240 tG~~i~vdgG~~~  252 (253)
T PRK05867        240 TGSDIVIDGGYTC  252 (253)
T ss_pred             CCCeEEECCCccC
Confidence            9999999999853

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-47  Score=315.92  Aligned_cols=245  Identities=33%  Similarity=0.463  Sum_probs=215.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.    ..++.++++|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888877776663    24678999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|++|||||.. ...+..+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+...+|++
T Consensus        83 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  160 (260)
T PRK07063         83 AFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPV  160 (260)
T ss_pred             HhCCCcEEEECCCcC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHHHH
Confidence            999999999999975 345666788999999999999999999999999998776 789999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---chH--hHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DVE--GFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +|+|+++|+++++.|++++||+||+|+||+++|++......   ...  ........|.+++.+|+|+++.++||+++.+
T Consensus       161 sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~  240 (260)
T PRK07063        161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEA  240 (260)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999998653211   111  1111223477889999999999999999999


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .++||+.+.+|||+++
T Consensus       241 ~~itG~~i~vdgg~~~  256 (260)
T PRK07063        241 PFINATCITIDGGRSV  256 (260)
T ss_pred             cccCCcEEEECCCeee
Confidence            9999999999999865

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.1e-46  Score=313.79  Aligned_cols=252  Identities=44%  Similarity=0.606  Sum_probs=215.0

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ++..+.||++||||+++|||+++|++|++.|++|++++|+++.+++..+.+..     .++..+.||+++++++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999988877766532     4688999999999999999999


Q ss_pred             HHHH-hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhH-HHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           77 AIEK-YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG-SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        77 ~~~~-~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~-~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      ..++ +|++|++|||||......++.+++.++|.+++++|+.| .+.+.+.+.+.+++++ .|.|+++||..+..+....
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~~~  160 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGPGS  160 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCCCC
Confidence            9999 79999999999998665588999999999999999995 5566666666666655 8999999999988775555


Q ss_pred             -ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccch-HhHH----HhhhcccCCCCCHHHHHHHHH
Q 024839          155 -HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-INDV-EGFV----CKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       155 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~-~~~~----~~~~~~~~~~~~~~~va~~~~  227 (262)
                       .+|+++|+|+++|+|++|.||+++|||||+|.||.+.|++.... .... ....    .+...|.++...|+|+++.+.
T Consensus       161 ~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~  240 (270)
T KOG0725|consen  161 GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAA  240 (270)
T ss_pred             cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHH
Confidence             79999999999999999999999999999999999999982211 1111 1111    122457899999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCcccccCc
Q 024839          228 FLASDESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      ||+++++.|+||++|.+|||+++....
T Consensus       241 fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  241 FLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             hhcCcccccccCCEEEEeCCEEeeccc
Confidence            999999889999999999999886543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=314.46  Aligned_cols=245  Identities=23%  Similarity=0.223  Sum_probs=204.7

Q ss_pred             CCCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      -...+++|++|||||++  |||+++|++|+++|++|++++|+.+ .++..+++..  ....++++|++|+++++++++++
T Consensus         2 ~~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          2 TTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             CCcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHH
Confidence            34457899999999997  9999999999999999999988732 2222222211  22346799999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|++|||||+...   ..++.+.+.++|.+.+++|+.+++.+++.++|.|++   +|+||++||..+..+.+.+
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~  157 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVIPNY  157 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCCCcc
Confidence            9999999999999997532   246778999999999999999999999999999953   5899999999988888888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+.+|+++++.|++++||+||+|+||+++|++........ .........|.+++.+|+|+++++.||++++
T Consensus       158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999754321111 1111112347788999999999999999999


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.++||+++.+|||+.+
T Consensus       238 ~~~itG~~i~vdgG~~~  254 (260)
T PRK06603        238 SKGVTGEIHYVDCGYNI  254 (260)
T ss_pred             cccCcceEEEeCCcccc
Confidence            99999999999999877

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=314.45  Aligned_cols=243  Identities=23%  Similarity=0.245  Sum_probs=202.8

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-C-CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-P-EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++|++|||||  ++|||+++|++|+++|++|++++|... ..+..+++. . .....++||++|+++++++++++.++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999997  679999999999999999999877632 222222221 1 23567899999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCC---CC-cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           81 YGSLDIMYSNAGVAGPV---GT-ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      ++++|++|||||+....   .+ +++.+.++|++++++|+.+++.+++.++|.|+++  +|+||++||..+..+.+.+..
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCCCCccc
Confidence            99999999999986321   12 3567889999999999999999999999998654  589999999999888888999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|++......... ........|.+|+.+|+|||+++.||+++.+.
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~  239 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSS  239 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999998654321111 11111234778899999999999999999999


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ++||++|.+|||+.+
T Consensus       240 ~~tG~~i~vdgG~~~  254 (261)
T PRK08690        240 GITGEITYVDGGYSI  254 (261)
T ss_pred             CcceeEEEEcCCccc
Confidence            999999999999875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=313.84  Aligned_cols=246  Identities=21%  Similarity=0.229  Sum_probs=209.4

Q ss_pred             CCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCc---hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |+.++.+|++|||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++...++.++++|++|++++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            3457899999999997  8999999999999999999997753   3455555555445688999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC
Q 024839           77 AIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~  153 (262)
                      +.++++++|++|||||+...   ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+   .|+||++||..+..+.+.
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCCC
Confidence            99999999999999997532   256778899999999999999999999999999953   589999999999988888


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      +.+|++||+|+.+|+++++.|++++||+||+|+||+++|++....... ..........|.++..+|+|+++.++||+++
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~  237 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSD  237 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999975432111 1111111223667889999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      .+.++||+++.+|||+.+
T Consensus       238 ~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        238 LSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             ccccccceEEEECCchhc
Confidence            999999999999999865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.3e-46  Score=314.02  Aligned_cols=244  Identities=26%  Similarity=0.296  Sum_probs=205.0

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         4 ~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++..  .++.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876433  22222333311  34678999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|.|++   .|+||++||..+..+.+.+
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCCccc
Confidence            9999999999999997532   357788899999999999999999999999999964   4899999999998888889


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+.+|+++|+.|++++||+||+|+||+++|++...... ...........|.++..+|+|+++++.||+++.
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence            9999999999999999999999999999999999999997643211 111111122347788999999999999999999


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.++||+++.+|||+++
T Consensus       239 ~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        239 ASGITGQTIYVDAGYCI  255 (258)
T ss_pred             hccccCcEEEECCcccc
Confidence            99999999999999865

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-46  Score=313.51  Aligned_cols=248  Identities=28%  Similarity=0.371  Sum_probs=217.1

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |++.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.    ..++.++++|++|++++++++++
T Consensus         1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence            67788999999999999999999999999999999999999887776655542    23678899999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +.+.++++|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .|+||++||..+..+.+....
T Consensus        81 ~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  158 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQG-RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVA  158 (265)
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchH
Confidence            999999999999999986 456788899999999999999999999999999998876 789999999999988888899


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-------chHhHH----HhhhcccCCCCCHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-------DVEGFV----CKVANLKGIVLKAKHVAEA  225 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~va~~  225 (262)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|++......       ......    .....|.+++.+|+|++++
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~  238 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARA  238 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999998643211       011111    1123467889999999999


Q ss_pred             HHHHcCCCCCceeceEEeeCCCccc
Q 024839          226 ALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++||+++.+.++||+++.+|||+..
T Consensus       239 ~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        239 LFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHhCchhcccccceEEEcCceEe
Confidence            9999999889999999999999753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-46  Score=311.91  Aligned_cols=243  Identities=23%  Similarity=0.293  Sum_probs=206.2

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchh---HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ..+++||++|||||+  +|||+++|++|+++|++|++++|+.+.   ++++.+++.  ...+++||++|+++++++++++
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD--APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHH
Confidence            346789999999999  599999999999999999999998543   333333333  3568899999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|+|++   .|+||++||..+..+.+.+
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~~~~  159 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVVENY  159 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCCccc
Confidence            9999999999999997532   246778899999999999999999999999999952   5899999999888888888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++........ .........|.+++.+|+|+++.++||++++
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999999999999865432111 1111122346788999999999999999998


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.++||+.+.+|||+++
T Consensus       240 ~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        240 ARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             hccccCcEEeeCCcccc
Confidence            99999999999999864

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-46  Score=310.30  Aligned_cols=245  Identities=39%  Similarity=0.575  Sum_probs=214.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.+++.+++..  .++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            57799999999999999999999999999999999998887777666532  4688899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISK  161 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK  161 (262)
                      ++|++|||||......++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+. .+.+.+..|++||
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHHHH
Confidence            9999999999865556778899999999999999999999999999998876 7899999998876 4677889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|++.++++++.|++++||+|++|+||+++|++.+..... ..........|.++..+|+|+++.++||+++.+.+++|+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  241 (254)
T PRK07478        162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGT  241 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCC
Confidence            9999999999999999999999999999999987544221 111122223466788999999999999999988999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .|.+|||+++
T Consensus       242 ~~~~dgg~~~  251 (254)
T PRK07478        242 ALLVDGGVSI  251 (254)
T ss_pred             eEEeCCchhc
Confidence            9999999865

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.4e-46  Score=315.26  Aligned_cols=252  Identities=23%  Similarity=0.190  Sum_probs=210.3

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----------C----ceEEEEecC--
Q 024839            4 PRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----------E----KASYRHCDV--   64 (262)
Q Consensus         4 ~~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----------~----~~~~~~~D~--   64 (262)
                      ++++||++|||||  ++|||+++|++|+++|++|++ +|+.+.++++...+..           .    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 6777766655543321           1    146788998  


Q ss_pred             CC------------------HHHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHH
Q 024839           65 RD------------------EKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKY  125 (262)
Q Consensus        65 ~~------------------~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~  125 (262)
                      ++                  +++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|+.+++.+++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  44899999999999999999999998542 236888999999999999999999999999


Q ss_pred             HHHHHHhCCCCcEEEEecCCCccCCCCCC-ccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCccchH
Q 024839          126 AARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTINDVE  203 (262)
Q Consensus       126 ~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~  203 (262)
                      ++|.|++   .|+||++||..+..+.+.+ ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|++.........
T Consensus       164 ~~p~m~~---~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~  240 (303)
T PLN02730        164 FGPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDD  240 (303)
T ss_pred             HHHHHhc---CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHH
Confidence            9999965   3899999999988877755 58999999999999999999986 89999999999999998754211111


Q ss_pred             hH-HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          204 GF-VCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       204 ~~-~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      .. ......|.+++.+|+|++..++||+++.+.++||+.+.+|||+.+....+|.|.
T Consensus       241 ~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~~~~  297 (303)
T PLN02730        241 MIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALDSPT  297 (303)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCCccc
Confidence            11 111223557889999999999999999999999999999999999988888874

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-45  Score=308.71  Aligned_cols=250  Identities=31%  Similarity=0.417  Sum_probs=217.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.++++ .++.++++|++++++++++++.+.+.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG-ERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999999887777766664 46889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.... .. .+.+.++|.+.+++|+.+++.+++.++|.|+ ++ .|+||++||..+..+.+.+..|+++|++
T Consensus        81 id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~~~~~~~Y~asKaa  156 (261)
T PRK08265         81 VDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFAQTGRWLYPASKAA  156 (261)
T ss_pred             CCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccCCCCCchhHHHHHH
Confidence            9999999997532 22 3578899999999999999999999999997 44 6899999999999988889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh---HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG---FVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +++|+++++.|++++||++|+|+||+++|++..........   .......|.+++.+|+|+++++.||+++.+.++||+
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~  236 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA  236 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999999999999999999999986543221111   111123467889999999999999999999999999


Q ss_pred             EEeeCCCcccccCccccc
Q 024839          241 DLVVDGGFTAVTNVMSML  258 (262)
Q Consensus       241 ~i~~dgG~~~~~~~~~~~  258 (262)
                      .|.+|||+++.....+.|
T Consensus       237 ~i~vdgg~~~~~~~~~~~  254 (261)
T PRK08265        237 DYAVDGGYSALGPEQGVP  254 (261)
T ss_pred             EEEECCCeeccCCCCCCC
Confidence            999999998876666655

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-45  Score=307.70  Aligned_cols=246  Identities=29%  Similarity=0.405  Sum_probs=210.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+ ..++..+.+.  ..++.++++|++++++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999998754 3444444442  24678899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC--Cccc
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG--PHAY  157 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--~~~Y  157 (262)
                      +++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+.  .+.|
T Consensus        83 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y  160 (254)
T PRK06114         83 ELGALTLAVNAAGIA-NANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHY  160 (254)
T ss_pred             HcCCCCEEEECCCCC-CCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcchH
Confidence            999999999999986 346777889999999999999999999999999998776 789999999988766543  6799


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++|+|+++++++++.|++++||+||+|+||+++|++.................|.++..+|+|+++.++||+++.+.++
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~  240 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFC  240 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999999986532111111112233477899999999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      ||++|.+|||+++
T Consensus       241 tG~~i~~dgg~~~  253 (254)
T PRK06114        241 TGVDLLVDGGFVC  253 (254)
T ss_pred             CCceEEECcCEec
Confidence            9999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-46  Score=309.70  Aligned_cols=249  Identities=25%  Similarity=0.284  Sum_probs=212.7

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |++.++++|++|||||++|||+++|++|+++|++|++++| +.+..+...+.+.   ..++.++++|+++++++++++++
T Consensus         1 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          1 NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4567889999999999999999999999999999998865 4455555444442   24788999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCC-----CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC
Q 024839           77 AIEKYGSLDIMYSNAGVAG-----PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG  151 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~  151 (262)
                      +.+.++++|++|||||..+     ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .|+||++||..+..+.
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~  159 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYI  159 (260)
T ss_pred             HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCC
Confidence            9999999999999998642     234667788999999999999999999999999998766 7899999999988888


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +.+..|++||+|+++|+++|+.|++++||+||+|+||+++|++........ .........|.++..+|+|+++.++||+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~  239 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLC  239 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            889999999999999999999999999999999999999999865443211 1111122346688999999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+.+++|+.+.+|||+++
T Consensus       240 ~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        240 SEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             ChhhhcccCcEEEEcCCeec
Confidence            99889999999999999875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.8e-46  Score=311.83  Aligned_cols=242  Identities=24%  Similarity=0.282  Sum_probs=204.9

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCc---hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+.   +.++++.++++  ....+++|++++++++++++++.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence            4679999999997  8999999999999999999998863   33334444433  356789999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|.|.+   .|+||+++|..+..+.+.+..
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~p~~~~  161 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVMPHYNV  161 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCcchh
Confidence            99999999999997632   256778899999999999999999999999999843   589999999988888888999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|++......... ........|.++..+|+|++++++||+++.+.
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~  241 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSR  241 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999987543221111 11112234778899999999999999999999


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      ++||++|.+|||+.+.
T Consensus       242 ~itG~~i~vdgG~~~~  257 (272)
T PRK08159        242 GVTGEVHHVDSGYHVV  257 (272)
T ss_pred             CccceEEEECCCceee
Confidence            9999999999998653

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-45  Score=309.28  Aligned_cols=244  Identities=33%  Similarity=0.538  Sum_probs=212.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ +..++..+++..  .++.++++|++++++++++++++.++++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999 666666665532  4688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|+|+++  .|+||++||..+..+.+....|++||+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999986444577788999999999999999999999999999865  389999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH----hHH---HhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE----GFV---CKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+++|+++++.|++++||+||+|+||+++|++.........    ...   .....|.+++.+|+|+++.++||+++.+.
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  239 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS  239 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999998654321111    011   11224667889999999999999999899


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      +++|+++.+|||....
T Consensus       240 ~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        240 FITGETIRIDGGVMAY  255 (272)
T ss_pred             CcCCCEEEECCCcccC
Confidence            9999999999997653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-45  Score=308.50  Aligned_cols=242  Identities=22%  Similarity=0.215  Sum_probs=201.1

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCC---chhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQ---DELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++|++|||||  ++|||+++|++|+++|++|++++|.   .+.++++.++++  ...++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            477999999996  6899999999999999999998654   333444444333  234789999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCC---CC-cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           80 KYGSLDIMYSNAGVAGPV---GT-ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      +++++|++|||||+....   .+ +++.+.++|++.+++|+.+++.++++++|+|.  + .|+||++||..+..+.+.+.
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~-~g~Ii~iss~~~~~~~~~~~  157 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--D-DASLLTLSYLGAERVVPNYN  157 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--C-CceEEEEeccccccCCCCcc
Confidence            999999999999975321   12 45678999999999999999999999999993  3 58999999999988888889


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++.....+... ........|.++..+|+||++.+.||+++++
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~  237 (260)
T PRK06997        158 TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLA  237 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999987543221111 1111122367889999999999999999999


Q ss_pred             CceeceEEeeCCCcccc
Q 024839          235 AYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~  251 (262)
                      .++||++|.+|||++..
T Consensus       238 ~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        238 SGVTGEITHVDSGFNAV  254 (260)
T ss_pred             cCcceeEEEEcCChhhc
Confidence            99999999999997653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=5.9e-45  Score=303.19  Aligned_cols=248  Identities=27%  Similarity=0.385  Sum_probs=210.3

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |+.++++||++|||||++|||++++++|+++|++|+++++.... ..+..+..+ .++.++++|++++++++++++++.+
T Consensus         3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALG-RRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34456889999999999999999999999999999988775421 111122222 4678899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++++.|.|++++..|+||++||..+..+.+....|++
T Consensus        82 ~~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (253)
T PRK08993         82 EFGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA  160 (253)
T ss_pred             HhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence            999999999999986 4466788999999999999999999999999999987653589999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+|+++++++++.|++++||+||+|+||+++|++.......... .......|.++..+|+|+++.+.||+++.+.+++
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~  240 (253)
T PRK08993        161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYIN  240 (253)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999999987544221111 1111234668899999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+++.+|||+.+
T Consensus       241 G~~~~~dgg~~~  252 (253)
T PRK08993        241 GYTIAVDGGWLA  252 (253)
T ss_pred             CcEEEECCCEec
Confidence            999999999865

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-45  Score=306.56  Aligned_cols=241  Identities=21%  Similarity=0.233  Sum_probs=200.3

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++|++|||||++  |||+++|++|+++|++|++++|+. +.++..+++..  ....+++||++|+++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            7899999999986  999999999999999999998873 33333333321  346788999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCC----CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           82 GSLDIMYSNAGVAGPV----GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      +++|++|||||+....    ..+.+.+.++|.+++++|+.+++.+++.+.|.+. +  .|+||++||..+..+.+.+..|
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~Iv~iss~~~~~~~~~~~~Y  159 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P--GSALLTLSYLGAERAIPNYNVM  159 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C--CcEEEEEecCCCCCCCCCcchh
Confidence            9999999999975321    1255688999999999999999999999988653 2  5899999999988888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++||+|+++|+++++.|++++|||||+|+||+++|++.....+.... .......|.+++.+|+||++.++||+++.+.+
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence            99999999999999999999999999999999999875432211111 11112346788999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      ++|+++.+|||+.+
T Consensus       240 itG~~i~vdgg~~~  253 (262)
T PRK07984        240 ISGEVVHVDGGFSI  253 (262)
T ss_pred             ccCcEEEECCCccc
Confidence            99999999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-45  Score=304.97  Aligned_cols=243  Identities=25%  Similarity=0.211  Sum_probs=202.3

Q ss_pred             CCCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |.++++|+++||||  ++|||+++|++|+++|++|++++|+.  +..+++.+++. .++.++++|++++++++++++++.
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHH
Confidence            35688999999999  89999999999999999999998764  33455555554 357789999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           79 EKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      ++++++|++|||||+...   ..++.+.++++|++++++|+.+++.+++.++|+|++   .|+||++++.. ..+.+.+.
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-cccCCccc
Confidence            999999999999998632   135677889999999999999999999999999963   47999998653 44556778


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccC-CCCCHHHHHHHHHHHcCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKG-IVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~  233 (262)
                      .|++||+|+.+|+++|+.|++++||+||+|+||+++|++......... ........|.+ ++.+|+|+|+.++||+++.
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence            899999999999999999999999999999999999998654321111 11111123555 5889999999999999999


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.++||+++.+|||+++
T Consensus       237 ~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        237 FPATTGEIVHVDGGAHA  253 (256)
T ss_pred             cccccceEEEEcCceec
Confidence            99999999999999865

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7e-45  Score=302.82  Aligned_cols=245  Identities=29%  Similarity=0.369  Sum_probs=216.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..  .++.++++|++++++++++++.+.+++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999999998887777666542  467789999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.+.|.+++ .++||++||..+..+.+....|+++|
T Consensus        85 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 GPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHHHH
Confidence            9999999999976 456778899999999999999999999999999998766 78999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++++.++++++.+++++||++|+|+||+++|++....... ..........|.+++.+|+|+++++.||+++.+.++||+
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            9999999999999999999999999999999987543221 111222234577889999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .+.+|||+++
T Consensus       243 ~i~~dgg~~~  252 (254)
T PRK08085        243 LLFVDGGMLV  252 (254)
T ss_pred             EEEECCCeee
Confidence            9999999865

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1e-44  Score=305.68  Aligned_cols=249  Identities=31%  Similarity=0.397  Sum_probs=215.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++..  .++.++++|++++++++++++++.++++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999999998777766666532  4678999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCC--------------CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           83 SLDIMYSNAGVAGPV--------------GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        83 ~~d~li~~ag~~~~~--------------~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      ++|++|||||.....              .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~  165 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAF  165 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc
Confidence            999999999964321              3466788999999999999999999999999998876 7999999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHhHHHhhhcccCCCCCHHHH
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGFVCKVANLKGIVLKAKHV  222 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v  222 (262)
                      .+.+....|+++|+|++.|+++++.+++++||+||+|+||+++|++.+.....      ..........|.+++.+|+|+
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  245 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEEL  245 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHH
Confidence            99888999999999999999999999999999999999999999975432110      011111123477889999999


Q ss_pred             HHHHHHHcCC-CCCceeceEEeeCCCcccccCc
Q 024839          223 AEAALFLASD-ESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       223 a~~~~~l~~~-~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +++++||+++ .+.++||+.|.+|||++.++++
T Consensus       246 a~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~~~  278 (278)
T PRK08277        246 LGTLLWLADEKASSFVTGVVLPVDGGFSAYSGV  278 (278)
T ss_pred             HHHHHHHcCccccCCcCCCEEEECCCeecccCC
Confidence            9999999999 8899999999999999988764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-45  Score=303.07  Aligned_cols=241  Identities=18%  Similarity=0.223  Sum_probs=207.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++.. .++.++++|++|+++++++++++.++++++|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            699999999999999999999999999999998887777666643 4678899999999999999999999999999999


Q ss_pred             eCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           89 SNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        89 ~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ||||... ...++.+.+.++|.+.+++|+.+++.+++.++|.|.+++..|+||++||..+..+.+....|+++|+|+.+|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            9999753 224567888999999999999999999999999987543378999999999988888889999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---------chH--hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---------DVE--GFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +++++.+++++||+||+|+||+++|++.+....         ...  ........|.+|..+|+||++++.||+++++++
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~  241 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEY  241 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccccc
Confidence            999999999999999999999999998643210         000  011112346788999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +||+++.+|||+.+
T Consensus       242 itG~~i~vdgg~~~  255 (259)
T PRK08340        242 MLGSTIVFDGAMTR  255 (259)
T ss_pred             ccCceEeecCCcCC
Confidence            99999999999764

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=300.52  Aligned_cols=246  Identities=36%  Similarity=0.527  Sum_probs=215.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +.+.+|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.  ..++.++++|+++.++++++++.+.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999887666555543  2468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++|||+|......++.+.+.++|++++++|+.+++.++++++|+|.+++ .+++|++||..+..+.+.+..|+++|
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHHH
Confidence            99999999999864445577889999999999999999999999999998776 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +++++|+++++.++.++||+|++|+||+++|++...........  ......|.++..+|+|+++.+.||+++.+.+++|
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G  241 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTG  241 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCC
Confidence            99999999999999999999999999999999876542211111  1222346678899999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      +.|.+|||+++
T Consensus       242 ~~i~~dgg~~~  252 (253)
T PRK06172        242 HALMVDGGATA  252 (253)
T ss_pred             cEEEECCCccC
Confidence            99999999865

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=301.48  Aligned_cols=247  Identities=31%  Similarity=0.400  Sum_probs=212.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ...++++|++|||||++|||++++++|+++|++|++++|+ +..+++.+.+.  ..++.++++|++++++++++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999988 44444443332  24688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+.++.|++
T Consensus        88 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  165 (258)
T PRK06935         88 EFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTA  165 (258)
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhHH
Confidence            999999999999986 446777888999999999999999999999999998876 789999999999888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+|+++++++++.|+.++||+||+|+||+++|++......... ........|.++..+|+|+++.+.||+++.+.+++
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  245 (258)
T PRK06935        166 SKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVN  245 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCC
Confidence            99999999999999999999999999999999998654322111 11111234668899999999999999999999999


Q ss_pred             ceEEeeCCCcccc
Q 024839          239 GHDLVVDGGFTAV  251 (262)
Q Consensus       239 G~~i~~dgG~~~~  251 (262)
                      |++|.+|||++++
T Consensus       246 G~~i~~dgg~~~~  258 (258)
T PRK06935        246 GHILAVDGGWLVR  258 (258)
T ss_pred             CCEEEECCCeecC
Confidence            9999999998763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-44  Score=301.94  Aligned_cols=242  Identities=29%  Similarity=0.391  Sum_probs=208.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+. .++.++++|++++++++++++++.+.++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG-DHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3679999999999999999999999999999999999888877766654 467889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHH----HHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQ----FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~----~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      |++|||||+.....++.+.+.++    |++++++|+.+++.+++.++|.|+++  .|+||+++|..+..+.+....|+++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~s  159 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYTAS  159 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCCchhHHH
Confidence            99999999864345566666665    88999999999999999999998764  4899999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      |+|++.|+++++.|+++. |+||+|+||+++|++.....           ++.. .......|.++..+|+|+++.+.||
T Consensus       160 K~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~~~eva~~~~fl  237 (263)
T PRK06200        160 KHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA-DMIAAITPLQFAPQPEDHTGPYVLL  237 (263)
T ss_pred             HHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchh-HHhhcCCCCCCCCCHHHHhhhhhhe
Confidence            999999999999999885 99999999999999854211           1111 1122234778999999999999999


Q ss_pred             cCCC-CCceeceEEeeCCCcccc
Q 024839          230 ASDE-SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       230 ~~~~-~~~i~G~~i~~dgG~~~~  251 (262)
                      +++. +.++||+.|.+|||+.+.
T Consensus       238 ~s~~~~~~itG~~i~vdgG~~~~  260 (263)
T PRK06200        238 ASRRNSRALTGVVINADGGLGIR  260 (263)
T ss_pred             ecccccCcccceEEEEcCceeec
Confidence            9998 899999999999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3e-44  Score=299.76  Aligned_cols=235  Identities=34%  Similarity=0.498  Sum_probs=206.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+..         .++.+++||++++++++++++++.++++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999886542         257889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+.+.+.+|+++|+|+
T Consensus        74 d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaal  151 (258)
T PRK06398         74 DILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAV  151 (258)
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhHHHH
Confidence            9999999986 557888899999999999999999999999999998776 79999999999999888999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----chHhH-----HHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DVEGF-----VCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++|+++++.|+++. |+||+|+||+++|++......     .....     ......|.++..+|+|++++++||+++.+
T Consensus       152 ~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~  230 (258)
T PRK06398        152 LGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA  230 (258)
T ss_pred             HHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999886 999999999999998643210     00100     01122466888999999999999999999


Q ss_pred             CceeceEEeeCCCcccc
Q 024839          235 AYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~  251 (262)
                      .+++|+++.+|||++..
T Consensus       231 ~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        231 SFITGECVTVDGGLRAL  247 (258)
T ss_pred             CCCCCcEEEECCccccC
Confidence            99999999999998663

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-44  Score=298.14  Aligned_cols=247  Identities=30%  Similarity=0.387  Sum_probs=217.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.++++|++|||||+++||++++++|+++|++|++++|++++.++..+.+..  .++.++++|++|+++++++++.+.++
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4467899999999999999999999999999999999998877776666543  35888999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.+.|.+++ .++||++||..+..+.+....|+++
T Consensus        85 ~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~~s  162 (255)
T PRK07523         85 IGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTAT  162 (255)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHHHH
Confidence            99999999999986 456788899999999999999999999999999998776 7899999999988888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |++++.++++++.+++++||+|++|+||+++|++....... ..........|.+++..|+|++++++||+++++.+++|
T Consensus       163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  242 (255)
T PRK07523        163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG  242 (255)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence            99999999999999999999999999999999986543221 11112223446788999999999999999998999999


Q ss_pred             eEEeeCCCcccc
Q 024839          240 HDLVVDGGFTAV  251 (262)
Q Consensus       240 ~~i~~dgG~~~~  251 (262)
                      +.+.+|||++++
T Consensus       243 ~~i~~~gg~~~~  254 (255)
T PRK07523        243 HVLYVDGGITAS  254 (255)
T ss_pred             cEEEECCCeecc
Confidence            999999998653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.6e-44  Score=294.92  Aligned_cols=224  Identities=26%  Similarity=0.324  Sum_probs=202.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++++||||||+|||+++|++|+++|++|++++|+++++.++.+++.+   .++.++++|+++++++.++.+++.++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            45789999999999999999999999999999999999999999999875   368899999999999999999999998


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      .++|++|||||+. ..+++.+.++++..+++++|+.++..++++++|.|.+++ .|.||+++|.++..|.|..+.|++||
T Consensus        83 ~~IdvLVNNAG~g-~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcC-CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHHH
Confidence            9999999999985 678999999999999999999999999999999999988 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +++.+|+++|+.|++++||+|.+++||++.|++........     ....+....++|+++|+..++.+.....
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~-----~~~~~~~~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDV-----YLLSPGELVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccccc-----ccccchhhccCHHHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999986111110     1111335578999999999999976543

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-44  Score=296.59  Aligned_cols=245  Identities=37%  Similarity=0.522  Sum_probs=213.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||+++||+++|++|+++|++|++++|+.+. .+..+.+...++.++++|++++++++++++++.+.++
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999998764 3333444445677999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.+.|++++ .++||++||..+..+.+...+|+++|+
T Consensus        89 ~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         89 RIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCCCchHHHHHH
Confidence            999999999986 456777888999999999999999999999999998876 789999999999989899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.++++++.+++++||++++|+||+++|++.................|.+++.+|+|+++.+++|+++.+.+++|++|
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i  246 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENL  246 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence            99999999999999999999999999999998654322222222222346788999999999999999999999999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       247 ~~dgg~~~  254 (255)
T PRK06841        247 VIDGGYTI  254 (255)
T ss_pred             EECCCccC
Confidence            99999876

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=5.2e-44  Score=303.62  Aligned_cols=243  Identities=29%  Similarity=0.295  Sum_probs=206.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc--hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.  ..++.++++|+++++++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999987653  33344433332  246778999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||......++.+.+.++|.+++++|+.+++.++++++|+|++   .++||++||..+..+.+...+|+++
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccCCCCcchhHHH
Confidence            9999999999997544467788999999999999999999999999999853   4799999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+|+++++++++.|++++||+||+|+||+++|++..... ............|.++..+|+|++++++||+++++.++||
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG  282 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA  282 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccc
Confidence            999999999999999999999999999999999853221 1111111222346788999999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      +.|.+|||+.+
T Consensus       283 ~~i~vdgG~~~  293 (294)
T PRK07985        283 EVHGVCGGEHL  293 (294)
T ss_pred             cEEeeCCCeeC
Confidence            99999999754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-44  Score=305.66  Aligned_cols=252  Identities=23%  Similarity=0.230  Sum_probs=199.7

Q ss_pred             CCCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh------------CCC-----ceEEEE
Q 024839            1 MSKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI------------GPE-----KASYRH   61 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~------------~~~-----~~~~~~   61 (262)
                      ||+.++.||++||||++  +|||+++|++|+++|++|++.++.. .++...+..            ...     ++..+.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            78889999999999996  9999999999999999999976541 111110000            000     111122


Q ss_pred             ecCCCH------------------HHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHH
Q 024839           62 CDVRDE------------------KQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMA  122 (262)
Q Consensus        62 ~D~~~~------------------~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l  122 (262)
                      +|+++.                  ++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|+.+++.+
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            333333                  4689999999999999999999998642 246888999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc-cchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCc-
Q 024839          123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTI-  199 (262)
Q Consensus       123 ~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~-  199 (262)
                      +++++|+|++   .|+||+++|..+..+.+... .|++||+|+++|+++|+.|+++ +|||||+|+||++.|++..... 
T Consensus       160 ~~a~~p~m~~---~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~  236 (299)
T PRK06300        160 LSHFGPIMNP---GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF  236 (299)
T ss_pred             HHHHHHHhhc---CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc
Confidence            9999999964   47899999999888877764 8999999999999999999987 5999999999999999864321 


Q ss_pred             -cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccc
Q 024839          200 -NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM  257 (262)
Q Consensus       200 -~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~  257 (262)
                       +..... .....|.++..+|+|+++.+.||+++.+.++||+++.+|||+.+...-.+|
T Consensus       237 ~~~~~~~-~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~  294 (299)
T PRK06300        237 IERMVDY-YQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEM  294 (299)
T ss_pred             cHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCc
Confidence             111111 112346678899999999999999999999999999999999885554444

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-44  Score=301.95  Aligned_cols=239  Identities=31%  Similarity=0.452  Sum_probs=205.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc---------hhHHHHHhhhCC--CceEEEEecCCCHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---------ELGNQVVSSIGP--EKASYRHCDVRDEKQVEET   73 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~   73 (262)
                      .+++|++|||||++|||+++|++|+++|++|++++++.         +.++++.+++..  .++.++++|++++++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46799999999999999999999999999999998775         555566555532  4678899999999999999


Q ss_pred             HHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-----CcEEEEecCCCcc
Q 024839           74 VAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-----RGSIICTTSTAST  148 (262)
Q Consensus        74 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-----~~~ii~isS~~~~  148 (262)
                      ++++.++++++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+++..     .|+||++||..+.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGIL-RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            999999999999999999986 4467888999999999999999999999999999976421     3799999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccC--CCCCHHHHHHHH
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKG--IVLKAKHVAEAA  226 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~  226 (262)
                      .+.+.+..|++||+|+++|+++++.|++++||+||+|+|| +.|++......   .....  .+.+  +..+|+|+++++
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~---~~~~~--~~~~~~~~~~pedva~~~  235 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA---EMMAK--PEEGEFDAMAPENVSPLV  235 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH---HHHhc--CcccccCCCCHHHHHHHH
Confidence            9989999999999999999999999999999999999999 78887532211   11111  1222  457999999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCccc
Q 024839          227 LFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +||+++.+.++||++|.+|||+..
T Consensus       236 ~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        236 VWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHhCchhcCCCCcEEEEcCCceE
Confidence            999999999999999999999865

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-43  Score=293.63  Aligned_cols=246  Identities=31%  Similarity=0.429  Sum_probs=215.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++++|++|||||++|||.+++++|+++|++|++++|+.+..+++.+++..  .++.++++|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998877777666532  35778999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .++|+++||..+..+.+.++.|++|
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHH
Confidence            999999999999753345677889999999999999999999999999998766 7899999999998888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+++++|+++++.|+.++||+|++|+||+++|++.......... .......|..+..+|+|+++.+.||+++...+++|
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  241 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTG  241 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999986654322111 11222346678899999999999999999999999


Q ss_pred             eEEeeCCCcc
Q 024839          240 HDLVVDGGFT  249 (262)
Q Consensus       240 ~~i~~dgG~~  249 (262)
                      +.+.+|||++
T Consensus       242 ~~~~~dgg~~  251 (252)
T PRK07035        242 ECLNVDGGYL  251 (252)
T ss_pred             CEEEeCCCcC
Confidence            9999999974

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.8e-45  Score=303.08  Aligned_cols=232  Identities=38%  Similarity=0.522  Sum_probs=200.4

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHh-CCcCEEEeC
Q 024839           15 GAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSN   90 (262)
Q Consensus        15 G~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d~li~~   90 (262)
                      |++  +|||+++|++|+++|++|++++|+.++.++..+++.. ....++++|++++++++++++++.+.+ +++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999999875433333311 123369999999999999999999999 999999999


Q ss_pred             CcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           91 AGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        91 ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ++....   ..++.+.+.++|.+.+++|+.+++.+++++.|+|.+   .|+||++||..+..+.+.+..|+++|+|+++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            998643   478888999999999999999999999999998866   48999999999999999999999999999999


Q ss_pred             HHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          168 VRSAASELGK-HGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       168 ~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +|++|.||++ +|||||+|+||++.|++..... .+..........|.+++.+|+|||+++.||+++.+.+||||+|.+|
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vD  237 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVD  237 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEES
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEEC
Confidence            9999999999 9999999999999999754332 1222223334568899899999999999999999999999999999


Q ss_pred             CCcc
Q 024839          246 GGFT  249 (262)
Q Consensus       246 gG~~  249 (262)
                      ||++
T Consensus       238 GG~s  241 (241)
T PF13561_consen  238 GGFS  241 (241)
T ss_dssp             TTGG
T ss_pred             CCcC
Confidence            9985

...

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-43  Score=301.91  Aligned_cols=243  Identities=32%  Similarity=0.360  Sum_probs=207.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||++++++|+++|++|+++.++.+  ..++..+.+.  ..++.++++|++++++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            577899999999999999999999999999998877543  2333333332  246788999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|.+   .++||++||..+..+.+....|++|
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCCCchhHHHH
Confidence            9999999999998645567888999999999999999999999999999853   4799999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+|+++|+++++.++.++||+||+|+||+++|++..... ............|.+++..|+|++.+++||+++.+.+++|
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G  288 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG  288 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            999999999999999999999999999999999864321 1111111222347788999999999999999998899999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+.+
T Consensus       289 ~~~~v~gg~~~  299 (300)
T PRK06128        289 EVFGVTGGLLL  299 (300)
T ss_pred             cEEeeCCCEeC
Confidence            99999999865

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-43  Score=294.34  Aligned_cols=240  Identities=28%  Similarity=0.350  Sum_probs=203.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH---
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK---   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~---   80 (262)
                      ++|++|||||++|||++++++|+++|++|+++. ++.+..++..+++.  ..++..+++|+++.++++.+++++.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            589999999999999999999999999998875 55565555554442  245778999999999999999888763   


Q ss_pred             -hC--CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           81 -YG--SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        81 -~~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                       ++  ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+..+.+...+|
T Consensus        83 ~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y  158 (252)
T PRK12747         83 RTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAY  158 (252)
T ss_pred             hcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCCCchhH
Confidence             34  799999999975 4567788999999999999999999999999999964   4799999999999988888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++||+|+++++++++.|++++||+||+|+||+++|++......... ........|.+++.+|+|+++++.||+++.+.+
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  238 (252)
T PRK12747        159 SMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW  238 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999998654322211 111222235678899999999999999998899


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      ++|+.+.+|||+.+
T Consensus       239 ~~G~~i~vdgg~~~  252 (252)
T PRK12747        239 VTGQLIDVSGGSCL  252 (252)
T ss_pred             cCCcEEEecCCccC
Confidence            99999999999754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=8.1e-44  Score=297.80  Aligned_cols=245  Identities=30%  Similarity=0.413  Sum_probs=205.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+... .++.++++|+++.++++++++++.++++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHG-DAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC-CceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999999999999999999999887776655432 468889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCH----HHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      |++|||||......++.+.+.    ++|++++++|+.+++.++++++|.|.++  +|++|+++|..+..+.+....|+++
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~s  158 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAA  158 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCCCCchhHHH
Confidence            999999997533334444443    5799999999999999999999999764  4789999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----cc-----hHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----ND-----VEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+|+++|+++++.|++++ |+||+|+||+++|++.....    ..     ..........|.+|+.+|+|+++++.||++
T Consensus       159 Kaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s  237 (262)
T TIGR03325       159 KHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFAT  237 (262)
T ss_pred             HHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeec
Confidence            999999999999999987 99999999999999864321    00     001111223477899999999999999999


Q ss_pred             CC-CCceeceEEeeCCCcccccC
Q 024839          232 DE-SAYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       232 ~~-~~~i~G~~i~~dgG~~~~~~  253 (262)
                      +. +.++||++|.+|||+.+...
T Consensus       238 ~~~~~~~tG~~i~vdgg~~~~~~  260 (262)
T TIGR03325       238 RGDTVPATGAVLNYDGGMGVRGF  260 (262)
T ss_pred             CCCcccccceEEEecCCeeeccc
Confidence            74 57899999999999876543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-43  Score=293.16  Aligned_cols=241  Identities=30%  Similarity=0.443  Sum_probs=203.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++.+|+++||||++|||+++|++|+++|++|+++.++.+...+..+   ..++.++++|++++++++++++++.+.+++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR---EKGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH---hCCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999988766543222221   124788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-CCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-GGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y~~sK~  162 (262)
                      +|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+.. +.+....|++||+
T Consensus        80 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asKa  157 (255)
T PRK06463         80 VDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAITKA  157 (255)
T ss_pred             CCEEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHHHH
Confidence            99999999986 446777889999999999999999999999999998766 78999999988774 3456788999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      |+++|+++++.|++++||+||+|+||+++|++........    .........|.++..+|+|+++.++||+++.+.+++
T Consensus       158 a~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  237 (255)
T PRK06463        158 GIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYIT  237 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCC
Confidence            9999999999999999999999999999999865421111    111112234667889999999999999999999999


Q ss_pred             ceEEeeCCCcc
Q 024839          239 GHDLVVDGGFT  249 (262)
Q Consensus       239 G~~i~~dgG~~  249 (262)
                      |+.+.+|||..
T Consensus       238 G~~~~~dgg~~  248 (255)
T PRK06463        238 GQVIVADGGRI  248 (255)
T ss_pred             CCEEEECCCee
Confidence            99999999973

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.3e-43  Score=290.91  Aligned_cols=244  Identities=31%  Similarity=0.416  Sum_probs=207.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|++|||||+++||+++|++|+++|++|++++|+.. ...+..+..+ .++.++++|++++++++++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALG-RRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998753 1222222222 46889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++.+.+.++|++++++|+.+++.+++++++.|.+++..++||++||..+..+.+....|+++|++
T Consensus        81 ~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  159 (248)
T TIGR01832        81 IDILVNNAGII-RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHG  159 (248)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHH
Confidence            99999999986 44567788899999999999999999999999999765435899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++++++++.+++++||+||+|+||+++|++....... ..........|.+++.+|+|+|+++.||+++.+.+++|+++
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       160 VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence            99999999999999999999999999999986543221 11111122346688999999999999999998999999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+.+
T Consensus       240 ~~dgg~~~  247 (248)
T TIGR01832       240 AVDGGWLA  247 (248)
T ss_pred             EeCCCEec
Confidence            99999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.1e-43  Score=292.49  Aligned_cols=242  Identities=32%  Similarity=0.443  Sum_probs=211.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||+++||++++++|+++|++|++++|+.+..++..+++..  .++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999998877776666542  4678899999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||||+. ...++.+.+.++|++++++|+.+++.+++.+++.|++.+..++||++||..+..+.+....|+++|++++
T Consensus        82 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         82 VVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            999999976 4567788899999999999999999999999999987653589999999999988888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---------chH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---------DVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .|++.++.+++++||+|++|+||+++|++......         ... ........+.+++.+|+|+++.+.||+++.+.
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999998653211         000 01111123567888999999999999999999


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ++||+.|.+|||+++
T Consensus       241 ~~~G~~i~vdgg~~~  255 (256)
T PRK08643        241 YITGQTIIVDGGMVF  255 (256)
T ss_pred             CccCcEEEeCCCeec
Confidence            999999999999875

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=3.5e-43  Score=296.67  Aligned_cols=250  Identities=48%  Similarity=0.838  Sum_probs=212.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .++.++++|++|+++++++++++.+++++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999988777666666543 46889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|+||||||.... ..++.+.+.++|++++++|+.+++.+++++.+.|.+++ .|+||+++|..+..+.+....|+++|+
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK~  173 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSKH  173 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCCCcccHHHHH
Confidence            9999999997632 24577889999999999999999999999999998766 789999999999888777889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch---HhHH-------HhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV---EGFV-------CKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      |+++++++++.|++++||+|++++||+++|++........   ....       .....+.++..+|+|+++++.||+++
T Consensus       174 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~  253 (280)
T PLN02253        174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASD  253 (280)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCc
Confidence            9999999999999999999999999999998754322111   0100       01111224567999999999999999


Q ss_pred             CCCceeceEEeeCCCcccccCcc
Q 024839          233 ESAYVSGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~~~~~~  255 (262)
                      .+.+++|+.|.+|||++....++
T Consensus       254 ~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
T PLN02253        254 EARYISGLNLMIDGGFTCTNHSL  276 (280)
T ss_pred             ccccccCcEEEECCchhhccchh
Confidence            99999999999999987655544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-43  Score=293.24  Aligned_cols=244  Identities=34%  Similarity=0.463  Sum_probs=213.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+.+|++|||||+++||+++|++|+++|++|++++|+.+..++..+.+. .++.++++|++++++++++++++.+.++++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG-PAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4779999999999999999999999999999999999988877766664 468889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..+..+.+....|++||+++
T Consensus        82 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  160 (257)
T PRK07067         82 DILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAV  160 (257)
T ss_pred             CEEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHH
Confidence            9999999986 446777889999999999999999999999999998764358999999998888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----------cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----------NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +.++++++.|+.++||++++|+||+++|++.....          ............|.+++.+|+|+++++.||+++.+
T Consensus       161 ~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  240 (257)
T PRK07067        161 ISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADA  240 (257)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999754321          01111111223467889999999999999999999


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .+++|+++++|||..+
T Consensus       241 ~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        241 DYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccCcEEeecCCEeC
Confidence            9999999999999765

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-43  Score=292.97  Aligned_cols=242  Identities=30%  Similarity=0.422  Sum_probs=210.2

Q ss_pred             CCCCEEEEecCCC-hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAAS-GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         6 ~~~k~~lItG~s~-giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++|++|||||++ |||++++++|+++|++|++++|+.+++++..+.+.    ..++.++++|++++++++++++++.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999985 99999999999999999999998877766655542    246789999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|+.+...++||+++|..+..+.+.+..|+++
T Consensus        95 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  173 (262)
T PRK07831         95 LGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA  173 (262)
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence            99999999999975 45678889999999999999999999999999999875436899999999988888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|++++||+|++|+||+++||+.................+.++..+|+|+++++.||+++.+.++||+
T Consensus       174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~  253 (262)
T PRK07831        174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGE  253 (262)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCc
Confidence            99999999999999999999999999999999986543222111111223467889999999999999999999999999


Q ss_pred             EEeeCCCc
Q 024839          241 DLVVDGGF  248 (262)
Q Consensus       241 ~i~~dgG~  248 (262)
                      ++.+|+++
T Consensus       254 ~i~v~~~~  261 (262)
T PRK07831        254 VVSVSSQH  261 (262)
T ss_pred             eEEeCCCC
Confidence            99999976

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=288.94  Aligned_cols=239  Identities=32%  Similarity=0.421  Sum_probs=207.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.      .....++.++++|++++++++++++.+.+.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999998754      112246789999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.|.|.++...++||++||..+..+.+.+..|+++|++
T Consensus        76 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  154 (252)
T PRK07856         76 LDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAG  154 (252)
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHH
Confidence            99999999976 44667788999999999999999999999999999875436899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH-HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF-VCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++|++.++.|++++ |++++|+||+++|++........... ......|.++..+|+|+++.++||+++.+.++||+.|
T Consensus       155 ~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i  233 (252)
T PRK07856        155 LLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANL  233 (252)
T ss_pred             HHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence            999999999999988 99999999999999865432211111 1122346688899999999999999998899999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||...
T Consensus       234 ~vdgg~~~  241 (252)
T PRK07856        234 EVHGGGER  241 (252)
T ss_pred             EECCCcch
Confidence            99999754

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-43  Score=291.48  Aligned_cols=243  Identities=26%  Similarity=0.313  Sum_probs=208.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.   ..++.++++|++++++++++++.   
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH---
Confidence            346789999999999999999999999999999999999888777666553   24678899999999999888764   


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                       ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||+++|..+..+.+.+..|++
T Consensus        79 -~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  155 (259)
T PRK06125         79 -AGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSA  155 (259)
T ss_pred             -hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHH
Confidence             47899999999986 456888999999999999999999999999999998776 689999999999888888889999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--------cchHhH-HHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--------NDVEGF-VCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +|+|+++|+++++.|+.++||+||+|+||+++|++.....        ...... ......|.+++.+|+|+++.++||+
T Consensus       156 sk~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (259)
T PRK06125        156 GNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA  235 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999643211        011101 1112236678899999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccc
Q 024839          231 SDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++.+.++||+.|.+|||+.++
T Consensus       236 ~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        236 SPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             CchhccccCceEEecCCeeec
Confidence            999999999999999998764

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-42  Score=288.92  Aligned_cols=246  Identities=30%  Similarity=0.441  Sum_probs=211.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+..+++.+++.  ..++.++++|++++++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988865 4455555554442  2468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||+|.. ...++.+.+.++|.+++++|+.+++.+++++.++|.+++..++||++||..+..+.+....|+++|+++
T Consensus        82 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         82 DVLVNNAGAM-TKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            9999999986 345677889999999999999999999999999997754358999999999998888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      ++++++++.+++++||++++|+||+++|++......+.. .......|..+..+|+|+++++.|++++...+++|+++.+
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  239 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVK-PDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIV  239 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHH-HHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence            999999999999999999999999999998654322211 1122234667788999999999999999999999999999


Q ss_pred             CCCcccccCcc
Q 024839          245 DGGFTAVTNVM  255 (262)
Q Consensus       245 dgG~~~~~~~~  255 (262)
                      |||+++..+|+
T Consensus       240 dgg~~~~~~~~  250 (256)
T PRK12743        240 DGGFMLANPQF  250 (256)
T ss_pred             CCCccccCCcc
Confidence            99988876655

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-42  Score=288.59  Aligned_cols=247  Identities=31%  Similarity=0.444  Sum_probs=211.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ..++++|++|||||+++||+++|++|+++|++|++++|+. +..+...+++.  ..++.++++|+++.++++++++.+.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999988854 33444444442  24678899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++++|++++..|+||++||..+..+.+...+|++
T Consensus        82 ~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         82 EFGTLDVMINNAGIE-NAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            999999999999976 4467778899999999999999999999999999987654689999999999888888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+|++.++++++.++.++||+|++|+||+++|++....... ..........|.+++.+|+|+++.+.||+++.+.+++
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            999999999999999999999999999999999986543211 1111112234668899999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.|.+|||+.+
T Consensus       241 G~~i~~d~g~~~  252 (261)
T PRK08936        241 GITLFADGGMTL  252 (261)
T ss_pred             CcEEEECCCccc
Confidence            999999999864

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-42  Score=290.08  Aligned_cols=247  Identities=32%  Similarity=0.426  Sum_probs=215.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ..+++.+|+++||||+++||++++++|+++|++|++++|+.++.++..+.+..  .++.++++|++++++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998877766665532  4688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|++|||||.. ...++.+.+.++|.+++++|+.+++.+++.++|+|++++ .++||++||..+..+.+.+..|++
T Consensus        84 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         84 EVGVIDILVNNAGII-KRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             hCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCccHHH
Confidence            999999999999987 446778899999999999999999999999999998876 799999999998888888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----c--hHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----D--VEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      +|++++.|+++++.++.++||+|++|+||++.|++......     .  ..........|..+..+|+|+++.+.+|+++
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  241 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASD  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999997644321     0  1111112233567889999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      .+.+++|+.+.+|||...
T Consensus       242 ~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        242 ASNFVNGHILYVDGGILA  259 (265)
T ss_pred             ccCCCCCCEEEECCCcee
Confidence            888999999999999754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-42  Score=288.68  Aligned_cols=244  Identities=28%  Similarity=0.369  Sum_probs=204.8

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |+..++++|++|||||++|||++++++|+++|++|++++|+.. ..+..+++.  ..++.++++|++++++++++++++.
T Consensus         1 ~~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK12823          1 MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAV   79 (260)
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHH
Confidence            5666789999999999999999999999999999999999853 334444442  2467789999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..  ....+|+
T Consensus        80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~Y~  156 (260)
T PRK12823         80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG--INRVPYS  156 (260)
T ss_pred             HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC--CCCCccH
Confidence            99999999999999653446778899999999999999999999999999998876 68999999987642  3456899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC------ccc----hHhHH--HhhhcccCCCCCHHHHHHHH
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT------IND----VEGFV--CKVANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~------~~~----~~~~~--~~~~~~~~~~~~~~~va~~~  226 (262)
                      ++|+|++.|+++++.+++++||+|++|+||+++||+....      .+.    .....  .....|.++..+|+|+++++
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  236 (260)
T PRK12823        157 AAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAI  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence            9999999999999999999999999999999999863210      000    01111  11234678889999999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCc
Q 024839          227 LFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      .||+++.+.+++|+.+.+|||.
T Consensus       237 ~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        237 LFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHcCcccccccCcEEeecCCC
Confidence            9999998899999999999996

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-42  Score=288.03  Aligned_cols=239  Identities=25%  Similarity=0.306  Sum_probs=204.5

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCC-----------chhHHHHHhhhC--CCceEEEEecCCCHH
Q 024839            4 PRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQ-----------DELGNQVVSSIG--PEKASYRHCDVRDEK   68 (262)
Q Consensus         4 ~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~~~~D~~~~~   68 (262)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+++.  ..++.++++|+++++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46889999999999  599999999999999999987542           122223333332  246889999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      +++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+.+.++|.|.+++ .|+||++||..+.
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  159 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccC
Confidence            99999999999999999999999986 446788999999999999999999999999999998776 7899999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHH
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                      .+.+++..|+++|+++++|+++++.++.++||+|++|+||+++|++...   .... ......|.++..+|+|+++.+.|
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~---~~~~-~~~~~~~~~~~~~~~d~a~~~~~  235 (256)
T PRK12859        160 GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE---EIKQ-GLLPMFPFGRIGEPKDAARLIKF  235 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH---HHHH-HHHhcCCCCCCcCHHHHHHHHHH
Confidence            8888899999999999999999999999999999999999999986431   1111 11122355778899999999999


Q ss_pred             HcCCCCCceeceEEeeCCCc
Q 024839          229 LASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~  248 (262)
                      |+++.+.+++|+++.+|||+
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        236 LASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HhCccccCccCcEEEeCCCc
Confidence            99998899999999999996

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-42  Score=316.88  Aligned_cols=247  Identities=33%  Similarity=0.424  Sum_probs=215.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ..+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++..+++|++|+++++++++++.++++++|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG-DEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999999888877776664 4677899999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||......++.+.+.++|++++++|+.+++.+++.++|+|  ++ .|+||++||..+..+.+....|+++|++++
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQ-GGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--cc-CCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            999999986444677889999999999999999999999999999  23 589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh--HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG--FVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +|+++++.|++++||+||+|+||+++|++..........  .......|.++..+|+|+++.++||+++.+.++||+.+.
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~  502 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLT  502 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999999999999999999999986543211111  111123466788999999999999999988999999999


Q ss_pred             eCCCcccccCccc
Q 024839          244 VDGGFTAVTNVMS  256 (262)
Q Consensus       244 ~dgG~~~~~~~~~  256 (262)
                      +|||+.....+.+
T Consensus       503 vdgg~~~~~~~~~  515 (520)
T PRK06484        503 VDGGWTAFGDAGD  515 (520)
T ss_pred             ECCCccCCCCCcc
Confidence            9999866554443

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4e-42  Score=286.71  Aligned_cols=246  Identities=26%  Similarity=0.398  Sum_probs=215.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.    ..++.++.+|++++++++++++.+.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999888776665552    2478889999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      +.++++|+||||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+....|+
T Consensus        84 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~  161 (257)
T PRK09242         84 DHWDGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPYG  161 (257)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcchH
Confidence            9999999999999985 456777889999999999999999999999999998776 68999999999998888899999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH-HHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF-VCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++|++++.|+++++.+++++||++++|+||+++|++........... ......|.++..+|+|++.++.||+++...++
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  241 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYI  241 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999999876543222111 11223466788899999999999999888899


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      +|+.+.+|||+..
T Consensus       242 ~g~~i~~~gg~~~  254 (257)
T PRK09242        242 TGQCIAVDGGFLR  254 (257)
T ss_pred             cCCEEEECCCeEe
Confidence            9999999999754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-43  Score=296.89  Aligned_cols=240  Identities=19%  Similarity=0.192  Sum_probs=195.1

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc----------hhHHHHHhhhCC--CceEEEEecCCCHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD----------ELGNQVVSSIGP--EKASYRHCDVRDEKQ   69 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~----------~~~~~~~~~~~~--~~~~~~~~D~~~~~~   69 (262)
                      ++.++++|++|||||++|||+++|++|+++|++|++++|+.          +..+++.+++..  .++.++++|++++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            34568999999999999999999999999999999999974          334444444422  357789999999999


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCC-cCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNA-GVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~a-g~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                      ++++++++.++++++|++|||| |...   ...++.+.+.++|.+++++|+.+++.++++++|.|.+++ .|+||++||.
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~  160 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCc
Confidence            9999999999999999999999 7421   125677888999999999999999999999999998765 6899999997


Q ss_pred             CccC---CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhhhcc-cCCCCC
Q 024839          146 ASTV---GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKVANL-KGIVLK  218 (262)
Q Consensus       146 ~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~-~~~~~~  218 (262)
                      .+..   +.+....|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....   +....... ...| .++..+
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~  239 (305)
T PRK08303        161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAISET  239 (305)
T ss_pred             cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccCCC
Confidence            6543   23346789999999999999999999999999999999999999853211   11100011 1224 356678


Q ss_pred             HHHHHHHHHHHcCCCC-CceeceEEe
Q 024839          219 AKHVAEAALFLASDES-AYVSGHDLV  243 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~-~~i~G~~i~  243 (262)
                      |+|++++++||+++.. .++||++|.
T Consensus       240 peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        240 PRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            9999999999999874 589999875

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=9e-42  Score=284.32  Aligned_cols=242  Identities=34%  Similarity=0.499  Sum_probs=208.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+++||++|||||+++||+++|++|+++|++|++++|+.++..+..+.+. .++.++++|++++++++++++++.+++++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG-ENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC-CceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999999998877666655554 46789999999999999999999999999


Q ss_pred             cCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|++|||||.... ..++.+.+.++|++.+++|+.+++.+++++.|+|.++  .++||++||..+..+.+...+|+++|+
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAASKG  162 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            9999999998643 2467788999999999999999999999999999764  489999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.+++.++.++.. +|+|++++||+++|++.................|.+++.+|+|++..+.+++++...+++|+.+
T Consensus       163 a~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  241 (255)
T PRK05717        163 GLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEF  241 (255)
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEE
Confidence            999999999999987 4999999999999987543321111111112346688999999999999999988889999999


Q ss_pred             eeCCCcc
Q 024839          243 VVDGGFT  249 (262)
Q Consensus       243 ~~dgG~~  249 (262)
                      .+|||++
T Consensus       242 ~~~gg~~  248 (255)
T PRK05717        242 VVDGGMT  248 (255)
T ss_pred             EECCCce
Confidence            9999975

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.3e-42  Score=283.86  Aligned_cols=243  Identities=28%  Similarity=0.355  Sum_probs=204.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS-   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-   83 (262)
                      +++|++|||||++|||+++|++|+++|++|+++.+ +.+..+.+...+. .++.++++|++++++++++++++.+.+++ 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999988655 4455555555444 46889999999999999999999999887 


Q ss_pred             cCEEEeCCcCCC-----CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           84 LDIMYSNAGVAG-----PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        84 ~d~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      +|++|||||...     ...++.+.+.++|.+.+++|+.+++.++++++|.|.+++ .++||+++|..+..+...+..|+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~  160 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDYT  160 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccchH
Confidence            999999998632     123567889999999999999999999999999998766 68999999988777776778999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++|+|+++|+++++.+++++||+||+|+||+++|+.......+..........|.+++.+|+|+++++.||+++.+.+++
T Consensus       161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  240 (253)
T PRK08642        161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVT  240 (253)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCcc
Confidence            99999999999999999999999999999999998654332221111122234668899999999999999999889999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.|.+|||+..
T Consensus       241 G~~~~vdgg~~~  252 (253)
T PRK08642        241 GQNLVVDGGLVM  252 (253)
T ss_pred             CCEEEeCCCeec
Confidence            999999999754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=6.2e-42  Score=285.30  Aligned_cols=241  Identities=34%  Similarity=0.440  Sum_probs=208.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+..+...+++..  .++.++++|+++.+++.++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999998877666555432  4678899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||+|... ..++ +.+.++|++.+++|+.+++.+++++.|+|.+.+ .++||++||..+..+.+.+..|+++|+
T Consensus        88 ~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  164 (255)
T PRK06113         88 KVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_pred             CCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHHHHH
Confidence            9999999999753 2333 678899999999999999999999999997765 689999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      |+++|+++++.++.++||+||+++||+++|++.................|..++.+|+|+++++.||+++...+++|+.|
T Consensus       165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i  244 (255)
T PRK06113        165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence            99999999999999999999999999999998765432221111122235577889999999999999998999999999


Q ss_pred             eeCCCc
Q 024839          243 VVDGGF  248 (262)
Q Consensus       243 ~~dgG~  248 (262)
                      .+|||.
T Consensus       245 ~~~gg~  250 (255)
T PRK06113        245 TVSGGG  250 (255)
T ss_pred             EECCCc
Confidence            999994

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-42  Score=284.03  Aligned_cols=244  Identities=29%  Similarity=0.385  Sum_probs=207.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ||++|||||++|||++++++|+++|++|++++|+.+..++..+.+.  ..++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            6899999999999999999999999999999999877776665553  24688999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||+|.. ...++.+.+.++|++++++|+.+++.++++++++|.++...++||++||..+..+.+...+|+++|+|++
T Consensus        81 ~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         81 ALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            999999975 3467778999999999999999999999999999876543689999999999888888889999999999


Q ss_pred             HHHHHHHHHHCC-CCcEEEEEeCCCccCCC-CCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          166 GLVRSAASELGK-HGIRVNCVSPFGVATPF-SAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       166 ~~~~~la~e~~~-~gi~v~~i~pG~v~t~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +|+++|+.|+.+ +||++++|+||+++|+. ..... .+..........+.+++.+|+|+++++.||+++.+.+++|+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI  239 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence            999999999975 79999999999999643 22111 1111111111235678899999999999999998889999999


Q ss_pred             eeCCCccccc
Q 024839          243 VVDGGFTAVT  252 (262)
Q Consensus       243 ~~dgG~~~~~  252 (262)
                      .+|||+.+..
T Consensus       240 ~~~gg~~~~~  249 (252)
T PRK07677        240 TMDGGQWLNQ  249 (252)
T ss_pred             EECCCeecCC
Confidence            9999976643

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-42  Score=290.02  Aligned_cols=237  Identities=35%  Similarity=0.460  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||++++++|+++|++|++++++.+...       ..++.++++|++++++++++++++.++++++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998876532       1357789999999999999999999999999


Q ss_pred             CEEEeCCcCCCCC--------CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           85 DIMYSNAGVAGPV--------GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        85 d~li~~ag~~~~~--------~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      |++|||||.....        .++.+.+.++|++++++|+.+++.+++++.++|++++ .++||++||..+..+.+....
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  157 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSC  157 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCch
Confidence            9999999975321        1234678999999999999999999999999998776 789999999999988888999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCcc---------chHhHHHh--h--hcccCCCCCHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA-TPFSAGTIN---------DVEGFVCK--V--ANLKGIVLKAKHV  222 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~---------~~~~~~~~--~--~~~~~~~~~~~~v  222 (262)
                      |+++|+++++|+++++.+++++||+||+|+||+++ |++......         ........  .  ..|.++...|+||
T Consensus       158 Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ev  237 (266)
T PRK06171        158 YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEV  237 (266)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHh
Confidence            99999999999999999999999999999999997 565321110         00111111  1  3477899999999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++++.||+++.+.++||++|.+|||++
T Consensus       238 a~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        238 ADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             hhheeeeeccccccceeeEEEecCccc
Confidence            999999999999999999999999975

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-42  Score=285.10  Aligned_cols=245  Identities=32%  Similarity=0.443  Sum_probs=215.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.++.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+++.  ..++.++++|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            556889999999999999999999999999999999999887776666553  246889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.+...+|+++
T Consensus        86 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         86 HGRLDILVNNVGAR-DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccHhHHH
Confidence            99999999999986 446788899999999999999999999999999998776 7999999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |++++.+++.++.|+.++||++++|+||+++|++...... ...........+.++..+|+|+++++++|+++.+.++||
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G  243 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNG  243 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCC
Confidence            9999999999999999999999999999999998544321 111112222346678899999999999999999999999


Q ss_pred             eEEeeCCCcc
Q 024839          240 HDLVVDGGFT  249 (262)
Q Consensus       240 ~~i~~dgG~~  249 (262)
                      +.|.+|||+.
T Consensus       244 ~~i~~dgg~~  253 (256)
T PRK06124        244 HVLAVDGGYS  253 (256)
T ss_pred             CEEEECCCcc
Confidence            9999999975

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-42  Score=286.65  Aligned_cols=245  Identities=36%  Similarity=0.521  Sum_probs=207.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+. .+..+++.  ..++.++++|++++++++++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34679999999999999999999999999999999998753 23333331  2467889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~s  160 (262)
                      +++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++.++|+|.+++ .++||++||..+. .+.+.+..|+++
T Consensus        81 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~s  158 (263)
T PRK08226         81 GRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALT  158 (263)
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHHH
Confidence            9999999999986 456778889999999999999999999999999997765 6899999998873 556778899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----chHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DVEGF--VCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |+++++++++++.+++++||+|++|+||+++|++......     .....  ......|.+++.+|+|+++.+.||+++.
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999999998654211     01111  1122346678899999999999999998


Q ss_pred             CCceeceEEeeCCCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~  251 (262)
                      +.+++|++|.+|||.++-
T Consensus       239 ~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        239 SSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             hcCCcCceEeECCCcccC
Confidence            999999999999998754

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-42  Score=287.18  Aligned_cols=242  Identities=28%  Similarity=0.359  Sum_probs=206.0

Q ss_pred             CCC-CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            1 MSK-PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         1 ~~~-~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |++ .+++||++|||||++|||++++++|+++|++|++++|+++..      . ..++.++++|++++++++++++++.+
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-PEGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-CCceeEEecCCCCHHHHHHHHHHHHH
Confidence            444 378899999999999999999999999999999999986532      1 24578899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-CCccc
Q 024839           80 KYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAY  157 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y  157 (262)
                      .++++|++|||||... ....+.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+ ...+|
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y  152 (260)
T PRK06523         74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAY  152 (260)
T ss_pred             HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchh
Confidence            9999999999999642 234567789999999999999999999999999998876 68999999999887754 78899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--------hHhHHHh-----hhcccCCCCCHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--------VEGFVCK-----VANLKGIVLKAKHVAE  224 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~va~  224 (262)
                      +++|+++++|+++++.+++++||++++|+||+++|++.......        .......     ...|.++..+|+|+++
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            99999999999999999999999999999999999985432110        0111110     1236678889999999


Q ss_pred             HHHHHcCCCCCceeceEEeeCCCccc
Q 024839          225 AALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       225 ~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.||+++.+.+++|+.+.+|||+..
T Consensus       233 ~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        233 LIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHhCcccccccCceEEecCCccC
Confidence            99999999999999999999999755

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.2e-41  Score=282.84  Aligned_cols=241  Identities=30%  Similarity=0.354  Sum_probs=210.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+++++++|++|||||+++||++++++|+++|++|++++|+.  .    +. ...++.++++|++++++++++++++.++
T Consensus         1 ~~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          1 MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L----TQ-EDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             CCccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h----hh-cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            667789999999999999999999999999999999999886  1    11 1246889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.+++.+.+++|+.+++.+++++.+.|++++ .++||++||..+..+.+....|+++
T Consensus        74 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~s  151 (252)
T PRK08220         74 TGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGAS  151 (252)
T ss_pred             cCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHH
Confidence            99999999999986 456778889999999999999999999999999998776 7899999999998888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH---------hHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE---------GFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |++++.|+++++.|++++||+|++++||+++|++.........         ........|.+++.+|+|++++++||++
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999998643321110         0111223466789999999999999999


Q ss_pred             CCCCceeceEEeeCCCccc
Q 024839          232 DESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~  250 (262)
                      +...+++|+++.+|||.+|
T Consensus       232 ~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        232 DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhcCccCcEEEECCCeec
Confidence            9889999999999999876

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-42  Score=285.13  Aligned_cols=193  Identities=33%  Similarity=0.448  Sum_probs=175.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CC-ceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PE-KASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++||+|+|||||+|||.++|++|++.|+.++++.|+.++++++.+++.   .. ++++++||++|+++++++++++.+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999888877776654442   23 599999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      ++|++|+||||||+.. ....++.+.+++.++|++|++|++.++++++|+|++++ .|+||++||+++..+.|..+.|++
T Consensus        88 ~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~Y~A  165 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSIYSA  165 (282)
T ss_pred             hcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccccch
Confidence            9999999999999985 67778888999999999999999999999999999987 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCC--cEEEEEeCCCccCCCCCCCc
Q 024839          160 SKHGLLGLVRSAASELGKHG--IRVNCVSPFGVATPFSAGTI  199 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~g--i~v~~i~pG~v~t~~~~~~~  199 (262)
                      ||+|+.+|+.+|..|+.+++  |++ .|+||+|+|++.....
T Consensus       166 SK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  166 SKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             HHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            99999999999999999987  566 9999999999766553

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-41  Score=278.93  Aligned_cols=246  Identities=30%  Similarity=0.399  Sum_probs=215.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |..+++|+++||||+++||++++++|+++|++|++++|+.++.+...+.+..  .++.++++|++++++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4557899999999999999999999999999999999998877766655532  46889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.+.|.|.+++ .|++|++||..+..+.+....|+++
T Consensus        82 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~s  159 (250)
T PRK12939         82 LGGLDGLVNNAGIT-NSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVAS  159 (250)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCCcchHHHH
Confidence            99999999999986 346777889999999999999999999999999998876 7899999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |++++.+++.++.+++.++|++++|+||+++|++.................+.+++.+|+|+++++.+++++..++++|+
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T PRK12939        160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCc
Confidence            99999999999999999999999999999999987654331111222223466788999999999999999888899999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .|.+|||++|
T Consensus       240 ~i~~~gg~~~  249 (250)
T PRK12939        240 LLPVNGGFVM  249 (250)
T ss_pred             EEEECCCccc
Confidence            9999999876

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-41  Score=284.53  Aligned_cols=230  Identities=25%  Similarity=0.359  Sum_probs=192.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++||||+ +|||+++|++|+ +|++|++++|+.+.+++..+++..  .++.++++|++++++++++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 899999999998777666655532  36788999999999999999988 5678999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--------------  151 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------------  151 (262)
                      +||||||+..        ..++|++++++|+.+++.+++.+.|.|.+   ++++|+++|..+..+.              
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999741        23679999999999999999999999964   3678999998776542              


Q ss_pred             ----------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHh--HHHhhhcc
Q 024839          152 ----------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEG--FVCKVANL  212 (262)
Q Consensus       152 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~--~~~~~~~~  212 (262)
                                      +.+..|++||+|+.+++++++.|++++||+||+|+||+++|++....... ...  .......|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p  227 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP  227 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC
Confidence                            24678999999999999999999999999999999999999986432211 101  11112346


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      .++..+|+|||++++||+++.+.++||+.|.+|||++++
T Consensus       228 ~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        228 AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            788999999999999999999999999999999998764

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-41  Score=281.83  Aligned_cols=254  Identities=27%  Similarity=0.303  Sum_probs=215.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++++|++|||||++|||.+++++|+++|++|++++|+.+..+...+++..  .++.++++|++++++++++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998777665554432  35678999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.|+++  +|+|+++||..+..+.+.+..|+++
T Consensus        84 ~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         84 FGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             cCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCCCCccHHHHH
Confidence            99999999999865 44677788999999999999999999999999998754  4899999999888888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVA-TPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      |++++.|+++++.++.++||+++.++||+++ |+........ ..........|.++..+|+|+++.+.+++++...+++
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYIT  240 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCcc
Confidence            9999999999999999999999999999997 5532222111 1111111123567788999999999999998888999


Q ss_pred             ceEEeeCCCcccccCcccccc
Q 024839          239 GHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       239 G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      |+++.+|||+.+-..++.|-|
T Consensus       241 G~~~~~~gg~~~~~~~~~~~~  261 (264)
T PRK07576        241 GVVLPVDGGWSLGGASIAMAE  261 (264)
T ss_pred             CCEEEECCCcccCchHHHHHh
Confidence            999999999998888888865

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=6.4e-41  Score=276.04  Aligned_cols=234  Identities=18%  Similarity=0.134  Sum_probs=196.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.+...+..+.   ..+.++.+|++++++++++++++.+.++++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ---AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            57999999999999999999999999999999987654333322   236789999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      |||||... .....+.+.++|++++++|+.+++.+++.++|.|.+++ ..++||++||..+..+.+.+..|+++|+++++
T Consensus        79 v~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~  157 (236)
T PRK06483         79 IHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN  157 (236)
T ss_pred             EECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH
Confidence            99999753 34456778999999999999999999999999997643 14799999999988888888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      |+++++.|+++ +||||+|+||++.++...  .+. .........|.++...|+|+++.+.||++  +.++||++|.+||
T Consensus       158 l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~vdg  231 (236)
T PRK06483        158 MTLSFAAKLAP-EVKVNSIAPALILFNEGD--DAA-YRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPVDG  231 (236)
T ss_pred             HHHHHHHHHCC-CcEEEEEccCceecCCCC--CHH-HHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEeCc
Confidence            99999999988 599999999999775421  111 11111223466788899999999999996  5799999999999


Q ss_pred             Ccccc
Q 024839          247 GFTAV  251 (262)
Q Consensus       247 G~~~~  251 (262)
                      |++++
T Consensus       232 g~~~~  236 (236)
T PRK06483        232 GRHLK  236 (236)
T ss_pred             ccccC
Confidence            98763

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-41  Score=278.93  Aligned_cols=243  Identities=30%  Similarity=0.402  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.+.++.+.+.+.  ..++.++.+|++++++++++++++.+.++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999999888776665542  24688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-------CcEEEEecCCCccCCCCCCc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-------RGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-------~~~ii~isS~~~~~~~~~~~  155 (262)
                      ++|++|||+|.. ...++.+.+.++|..++++|+.+++.++++++|.|.++..       .+++|+++|..+..+.+...
T Consensus        86 ~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         86 TIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            999999999986 4466777889999999999999999999999999986541       47999999999888888889


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +|+++|++++.+++.++.+++++||+|++|+||+++|++.................+.++..+|+|+++.+.||+++.+.
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~  244 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQ  244 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence            99999999999999999999999999999999999999865432222111222223567899999999999999999999


Q ss_pred             ceeceEEeeCCCc
Q 024839          236 YVSGHDLVVDGGF  248 (262)
Q Consensus       236 ~i~G~~i~~dgG~  248 (262)
                      +++|+.|.+|||+
T Consensus       245 ~~~G~~i~~dgg~  257 (258)
T PRK06949        245 FINGAIISADDGF  257 (258)
T ss_pred             CCCCcEEEeCCCC
Confidence            9999999999997

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-40  Score=277.70  Aligned_cols=256  Identities=28%  Similarity=0.337  Sum_probs=218.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+.  ..++.++.+|++++++++++++++.+.
T Consensus         5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999887776665553  246888999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||.. ....+.+.+.+++++++++|+.+++.+.+++.+.|.+....++||++||..+..+.++...|+++
T Consensus        85 ~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  163 (263)
T PRK07814         85 FGRLDIVVNNVGGT-MPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA  163 (263)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence            99999999999975 34667788999999999999999999999999999874337899999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |++++.++++++.++.+ +|++++|+||++.|++....... ..........+..+..+|+|+++.++|++++...+++|
T Consensus       164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  242 (263)
T PRK07814        164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTG  242 (263)
T ss_pred             HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence            99999999999999987 69999999999999876432111 11111111235566789999999999999988889999


Q ss_pred             eEEeeCCCcccccCccccccCCC
Q 024839          240 HDLVVDGGFTAVTNVMSMLEGHG  262 (262)
Q Consensus       240 ~~i~~dgG~~~~~~~~~~~~~~~  262 (262)
                      +.+.+|||...  +..++|+.++
T Consensus       243 ~~~~~~~~~~~--~~~~~~~~~~  263 (263)
T PRK07814        243 KTLEVDGGLTF--PNLDLPIPDL  263 (263)
T ss_pred             CEEEECCCccC--CCCCCCCCCC
Confidence            99999999776  7778877553

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=276.00  Aligned_cols=245  Identities=38%  Similarity=0.530  Sum_probs=214.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+. ..++.++++|++++++++++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999999887776665553 246789999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||+|......++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+....|+.+|++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            999999999865556677889999999999999999999999999998776 7899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++.+++.++.+++++||++++++||++.|++.......   ..........+.++..+|+|+++++++++++...+++|+
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  240 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV  240 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            99999999999999999999999999999986654321   111111122355778899999999999999888899999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .+.+|||..+
T Consensus       241 ~~~~~gg~~~  250 (251)
T PRK07231        241 TLVVDGGRCV  250 (251)
T ss_pred             eEEECCCccC
Confidence            9999999765

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-43  Score=262.69  Aligned_cols=243  Identities=28%  Similarity=0.315  Sum_probs=214.6

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      |+.++.|+.+++||+.-|||++++++|++.|++|+.++|+++.+..+.++.. .-+..++.|+++.+.+.+++-.    .
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p-~~I~Pi~~Dls~wea~~~~l~~----v   75 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP-SLIIPIVGDLSAWEALFKLLVP----V   75 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC-cceeeeEecccHHHHHHHhhcc----c
Confidence            4567899999999999999999999999999999999999999998888765 3477889999997777665543    3


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|.++||||+. ...++.+.+.++|.+.|++|+.+++.+.|....-+..+..+|.|+++||.++..+......|+++|
T Consensus        76 ~pidgLVNNAgvA-~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatK  154 (245)
T KOG1207|consen   76 FPIDGLVNNAGVA-TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATK  154 (245)
T ss_pred             Cchhhhhccchhh-hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecH
Confidence            6899999999986 668999999999999999999999999999888777766689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh-hhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK-VANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|+++++|+++.|+.+++||||++.|-.+.|.|-+....+....... ...|.+|+...+|+.+++.||+|+.+.+.||.
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGs  234 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGS  234 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCc
Confidence            99999999999999999999999999999999987764432222211 13478999999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      ++-++|||+.
T Consensus       235 tlpveGGfs~  244 (245)
T KOG1207|consen  235 TLPVEGGFSN  244 (245)
T ss_pred             eeeecCCccC
Confidence            9999999975

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-41  Score=279.25  Aligned_cols=243  Identities=30%  Similarity=0.366  Sum_probs=209.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +.+|+++||||+++||+++|++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++++++++++++++.+++++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999999999887777666653  246889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||......++.+.+.++|++.+++|+.+++.+++++.+.|.++  .++||++||..+..+.+.+..|+++|++
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCCCCcchhHHHHHH
Confidence            99999999986555677788999999999999999999999999998765  3799999999998888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--------chHhHHH--hhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--------DVEGFVC--KVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ++.++++++.+++++||++++++||++.||+......        .......  ....+.++..+|+|+++++.+++++.
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~  240 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDL  240 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHh
Confidence            9999999999999999999999999999987543210        0011111  11235677889999999999999988


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      ..+++|+++.+|||..+
T Consensus       241 ~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        241 ARAITGQTLDVNCGEYH  257 (258)
T ss_pred             hhCccCcEEEeCCcccc
Confidence            88999999999999743

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-40  Score=281.07  Aligned_cols=244  Identities=30%  Similarity=0.393  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.+ ..+...+.+.  ..++.++.+|+++.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999998853 3334433332  246889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||......++.+.+.++|.+.+++|+.+++.+++++.+.|++   .++||++||..+..+.+....|+++
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~s  198 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNETLIDYSAT  198 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCCcchhHHH
Confidence            9999999999997644567788999999999999999999999999999853   4799999999998888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|++.|+++++.++.++||++++|+||+++|++.................+.++..+|+|+++++++|+++.+.+++|+
T Consensus       199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~  278 (290)
T PRK06701        199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQ  278 (290)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCc
Confidence            99999999999999999999999999999999986543222111111223366778999999999999999998999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||...
T Consensus       279 ~i~idgg~~~  288 (290)
T PRK06701        279 MLHVNGGVIV  288 (290)
T ss_pred             EEEeCCCccc
Confidence            9999999755

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-40  Score=278.05  Aligned_cols=242  Identities=27%  Similarity=0.370  Sum_probs=207.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.    ..++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999877766655442    246889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++++.+.|.+++..++||++||..+..+.+...+|+++|+|
T Consensus        82 id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIA-KAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            99999999976 44677889999999999999999999999999999876435899999999888888888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCc-cCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGV-ATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v-~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      +++++++++.|++++||+|++++||++ .+++.....+          +..........|.++..+++|+++++++|+++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999975 5665433211          11111112234678899999999999999998


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      .+.+++|+.+++|||.++
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            888999999999999864

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=275.22  Aligned_cols=242  Identities=21%  Similarity=0.286  Sum_probs=206.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |++|++|||||+++||+++|++|+++|++|++. +++.+..++..+++.  ..++..+.+|+++.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999999998875 444444444444432  24677889999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|++++ .++||++||..+..+.+.+..|+++|+
T Consensus        81 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGIT-RDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHHH
Confidence            999999999986 345777889999999999999999999999999998766 789999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.|+++++.++.++||++++|+||++.||+.....+...... ....|..+..+++++++.+.||+++.+.+++|+.+
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKI-VATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHH-HhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            99999999999999999999999999999998754322211111 12235677889999999999999998899999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+.+
T Consensus       238 ~~~~g~~~  245 (246)
T PRK12938        238 SLNGGLHM  245 (246)
T ss_pred             EECCcccC
Confidence            99999753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=284.78  Aligned_cols=248  Identities=31%  Similarity=0.429  Sum_probs=205.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||+++|++|+++|++|+++++.. +..++..+++.  ..++.++++|++++++++++++.+.+
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999998753 34445555443  24788999999999999999999998


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC------CCcEEEEecCCCccCCCCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK------IRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~  153 (262)
                       ++++|+||||||+.. ...+.+.+.++|++.+++|+.+++.+++++.++|+++.      ..|+||++||..+..+.+.
T Consensus        87 -~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (306)
T PRK07792         87 -LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG  164 (306)
T ss_pred             -hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC
Confidence             999999999999873 45677889999999999999999999999999997531      1379999999999888888


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ...|+++|+++++|++.++.|++++||+||+|+||. .|++.............    ......+|+++++.+.||+++.
T Consensus       165 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~----~~~~~~~pe~va~~v~~L~s~~  239 (306)
T PRK07792        165 QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEA----GGIDPLSPEHVVPLVQFLASPA  239 (306)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhh----hccCCCCHHHHHHHHHHHcCcc
Confidence            899999999999999999999999999999999994 78775432211111101    1123458999999999999998


Q ss_pred             CCceeceEEeeCCCcccccCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAVTNVMSM  257 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~~~~~  257 (262)
                      +.++||+.+.+|||......+++.
T Consensus       240 ~~~~tG~~~~v~gg~~~~~~~~~~  263 (306)
T PRK07792        240 AAEVNGQVFIVYGPMVTLVAAPVV  263 (306)
T ss_pred             ccCCCCCEEEEcCCeEEEEeeeee
Confidence            889999999999998765544443

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-40  Score=274.69  Aligned_cols=240  Identities=34%  Similarity=0.482  Sum_probs=207.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+..++..++++ .++.++++|+++.+++.++++.+.+.++++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG-ESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5679999999999999999999999999999999999877776666664 467889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||.. ...++.+.+.++|++++++|+.+++.+++++.|+|.+   .+++|+++|..+..+.+...+|+++|+++
T Consensus        82 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~  157 (249)
T PRK06500         82 DAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMPNSSVYAASKAAL  157 (249)
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCCCccHHHHHHHHH
Confidence            9999999976 4466778899999999999999999999999999853   47899999988888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--ccc-hHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--IND-VEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~-~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ++++++++.|++++||++++++||+++||+....  ... .....  .....|..+..+|+|+++++.+++++.+.+++|
T Consensus       158 ~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  237 (249)
T PRK06500        158 LSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVG  237 (249)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999975432  111 11111  111235567889999999999999988889999


Q ss_pred             eEEeeCCCcc
Q 024839          240 HDLVVDGGFT  249 (262)
Q Consensus       240 ~~i~~dgG~~  249 (262)
                      +.|.+|||.+
T Consensus       238 ~~i~~~gg~~  247 (249)
T PRK06500        238 SEIIVDGGMS  247 (249)
T ss_pred             CeEEECCCcc
Confidence            9999999964

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4e-40  Score=272.38  Aligned_cols=242  Identities=27%  Similarity=0.425  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||+++||++++++|+++|+.|++.+|+.+.+++..+.++ .++.++.+|+++.++++++++++.+.++++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG-ERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999998887777665554 467889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||.. ...++.+.+.++|++++++|+.+++.+++++.+.+.+++ .++||++||..+..+.+....|+++|+++
T Consensus        82 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~  159 (245)
T PRK12936         82 DILVNNAGIT-KDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGM  159 (245)
T ss_pred             CEEEECCCCC-CCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHHHHH
Confidence            9999999986 446677888999999999999999999999999887766 78999999999888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      ..+++.++.++...|+++++++||+++|++.......... ......|..+..+|+|+++.+.|++++...+++|+++.+
T Consensus       160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~  238 (245)
T PRK12936        160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKE-AIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHV  238 (245)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHH-HHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEE
Confidence            9999999999999999999999999999876543222111 111234667788999999999999998888999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+.+
T Consensus       239 ~~g~~~  244 (245)
T PRK12936        239 NGGMAM  244 (245)
T ss_pred             CCCccc
Confidence            999864

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-40  Score=282.19  Aligned_cols=239  Identities=23%  Similarity=0.332  Sum_probs=209.0

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |++.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. .++..+++|++|+++++++++++.+
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            556778999999999999999999999999999999999999888887777753 4567778999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|.++  .|+||++||..+..+.+....|++
T Consensus        82 ~~g~id~vI~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         82 RFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             HcCCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCCCchHHHH
Confidence            999999999999986 45788889999999999999999999999999999774  489999999999999889999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch---HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV---EGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ||+++++|+++++.|++++||+|++++||+++|++........   .........|.++..+|+|+++.+.+++++...+
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~  238 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARR  238 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCE
Confidence            9999999999999999999999999999999999876543221   1111222235678899999999999999998888


Q ss_pred             eeceEE
Q 024839          237 VSGHDL  242 (262)
Q Consensus       237 i~G~~i  242 (262)
                      ++|..+
T Consensus       239 i~~~~~  244 (296)
T PRK05872        239 VYAPRW  244 (296)
T ss_pred             EEchHH
Confidence            887743

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-40  Score=273.47  Aligned_cols=243  Identities=29%  Similarity=0.360  Sum_probs=208.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEE-eeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |.+|++|||||+++||++++++|+++|++|++ ..|+.++.+++.+++.  ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999876 4777776666555542  24688899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||+|.. ...++.+.+.++|...+++|+.+++.++++++++|++++ .++||++||..+..+.+....|+++|+
T Consensus        82 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHHH
Confidence            999999999975 456778899999999999999999999999999998876 789999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH-HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF-VCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++.|+++++.++.+.||++++|+||+++|++........... ......+.++.++++|+++.+.++++++..+++|+.
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  239 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQT  239 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            9999999999999999999999999999999865432211111 111123456789999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +.+|||.++
T Consensus       240 ~~~~gg~~~  248 (250)
T PRK08063        240 IIVDGGRSL  248 (250)
T ss_pred             EEECCCeee
Confidence            999999875

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=6.9e-40  Score=269.86  Aligned_cols=232  Identities=29%  Similarity=0.389  Sum_probs=193.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|++|||||++|||++++++|+++|++|+++.++ .+..+++.+..   .+.++.+|+++.+++.++++    .+++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~----~~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVR----KSGA   75 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHH----HhCC
Confidence            4779999999999999999999999999999887664 44455444443   25678899999988877765    3578


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~  162 (262)
                      +|++|||||.. ...+..+.+.++|++++++|+.+++.+++.+.+.|.+   .+++|++||..+. .+.+....|+++|+
T Consensus        76 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~~sKa  151 (237)
T PRK12742         76 LDILVVNAGIA-VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMPVAGMAAYAASKS  151 (237)
T ss_pred             CcEEEECCCCC-CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCCCCCCcchHHhHH
Confidence            99999999976 3456667889999999999999999999999999853   5799999998874 56678899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.+++.++.+++++||+||+|+||+++|++.....+. . .......|.++..+|+|+++.+.||+++.+.++||+.+
T Consensus       152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~  229 (237)
T PRK12742        152 ALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM-K-DMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMH  229 (237)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHH-H-HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEE
Confidence            999999999999999999999999999999986532211 1 11122236678899999999999999999999999999


Q ss_pred             eeCCCcc
Q 024839          243 VVDGGFT  249 (262)
Q Consensus       243 ~~dgG~~  249 (262)
                      .+|||+.
T Consensus       230 ~~dgg~~  236 (237)
T PRK12742        230 TIDGAFG  236 (237)
T ss_pred             EeCCCcC
Confidence            9999975

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-40  Score=275.22  Aligned_cols=246  Identities=29%  Similarity=0.423  Sum_probs=205.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.. +..+.+.  ..++.++++|++++++++++++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999987765 4444432  246889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||.. ....+.+.. ++|++.+++|+.+++.+++.++|.|+++  .++|+++||..+..+.+.+..|++|
T Consensus        81 ~~~id~vi~~ag~~-~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (258)
T PRK08628         81 FGRIDGLVNNAGVN-DGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAAA  156 (258)
T ss_pred             cCCCCEEEECCccc-CCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCCCCCchhHHH
Confidence            99999999999975 333444444 9999999999999999999999988654  4899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHh--hhccc-CCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCK--VANLK-GIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~--~~~~~-~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |++++++++.++.|+.++||+++.|+||+++|++.....   .........  ...+. .++.+|+|+++.+++++++.+
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERS  236 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999999999754321   111111111  11133 368899999999999999988


Q ss_pred             CceeceEEeeCCCcccccC
Q 024839          235 AYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~  253 (262)
                      .+++|+.+.+|||++....
T Consensus       237 ~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        237 SHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             ccccCceEEecCCcccccc
Confidence            8999999999999876543

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-40  Score=274.37  Aligned_cols=244  Identities=24%  Similarity=0.338  Sum_probs=196.3

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC----chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ----DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~----~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      |+++++++|++|||||++|||+++|++|+++|++|+++.++    .+..++..+++.  ..++.++++|+++++++++++
T Consensus         1 ~~~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          1 MADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            67778899999999999999999999999999997666543    233444444432  246888999999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEe-cCCCccCCCCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICT-TSTASTVGGSG  153 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~i-sS~~~~~~~~~  153 (262)
                      +++.++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+   .++++++ +|..+ .+.+.
T Consensus        81 ~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~-~~~~~  155 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKV-LKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLG-AFTPF  155 (257)
T ss_pred             HHHHHhhCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhc-ccCCC
Confidence            99999999999999999986 3467778899999999999999999999999998853   3677766 44433 34567


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hH--HHhhhccc--CCCCCHHHHHHHHHH
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GF--VCKVANLK--GIVLKAKHVAEAALF  228 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~--~~~~~~~~--~~~~~~~~va~~~~~  228 (262)
                      +..|++||+|++.|+++++.|+.++||+|++++||++.|++......... ..  ......+.  .++.+|+|+++.+.|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRF  235 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHH
Confidence            78999999999999999999999999999999999999997644321110 00  00111222  368899999999999


Q ss_pred             HcCCCCCceeceEEeeCCCccc
Q 024839          229 LASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++ ..+++|+++.+|||+.+
T Consensus       236 l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        236 LVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             hhcc-cceeecceEeecCCccC
Confidence            9995 57999999999999865

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7.4e-40  Score=272.39  Aligned_cols=241  Identities=33%  Similarity=0.467  Sum_probs=209.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |+++||||+++||.+++++|+++|++|++++|+.+..++..+++..  .++.++.+|+++++++.++++.+.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999997777666655532  46789999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|++++..+++|++||..+..+.+....|+.+|++++.
T Consensus        81 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            99999986 45678889999999999999999999999999999886545899999999999988899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH----------hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE----------GFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |++.++.+++++||++++++||+++|++.........          ........+.+++.+|+|+++++.||+++.+.+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            9999999999999999999999999998644321100          011112235677899999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      ++|+++.+|||+.+
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-40  Score=272.03  Aligned_cols=242  Identities=35%  Similarity=0.539  Sum_probs=206.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..++||+++||||++|||.+++++|+++|++|++++|+.+..++..+.+.   ..++++|++++++++++++++.+..++
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999999877766655553   257899999999999999999999999


Q ss_pred             cCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-CCCccchhhh
Q 024839           84 LDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-SGPHAYTISK  161 (262)
Q Consensus        84 ~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~sK  161 (262)
                      +|++|||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+. +....|+++|
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHHH
Confidence            9999999997532 24566788999999999999999999999999998766 7899999998776665 3677899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ++++.+++.++.++.++||++++++||+++|++...........  ......|.+++.+|+|+++++.+|+++.+.+++|
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g  238 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITA  238 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999865432211111  1111235577899999999999999999999999


Q ss_pred             eEEeeCCCcc
Q 024839          240 HDLVVDGGFT  249 (262)
Q Consensus       240 ~~i~~dgG~~  249 (262)
                      +.+.+|||++
T Consensus       239 ~~~~~~~g~~  248 (255)
T PRK06057        239 STFLVDGGIS  248 (255)
T ss_pred             cEEEECCCee
Confidence            9999999975

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-40  Score=269.31  Aligned_cols=221  Identities=15%  Similarity=0.144  Sum_probs=189.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++..  .++..+++|++++++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999888777665532  4677899999999999999999999999


Q ss_pred             -CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           83 -SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        83 -~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                       ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|++++.+|+||++||..+.   +.+..|+++|
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK  158 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN  158 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence             999999999865455678889999999999999999999999999999875436899999997644   4577899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+.+|+++++.|++++||+||+|+||++.|+...  ....   +...         .+|++.+..||++  +.|+||+.
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~~---~~~~---------~~~~~~~~~~l~~--~~~~tg~~  222 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAVH---WAEI---------QDELIRNTEYIVA--NEYFSGRV  222 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHHH---HHHH---------HHHHHhheeEEEe--cccccceE
Confidence            99999999999999999999999999999998321  1111   1111         1899999999997  66999998


Q ss_pred             Eee
Q 024839          242 LVV  244 (262)
Q Consensus       242 i~~  244 (262)
                      +..
T Consensus       223 ~~~  225 (227)
T PRK08862        223 VEA  225 (227)
T ss_pred             Eee
Confidence            864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=9.3e-40  Score=271.09  Aligned_cols=243  Identities=32%  Similarity=0.467  Sum_probs=210.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+++||++++++|+++|++|++++|+.+...++.+.+.  ..++.++++|++++++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999887766655543  246889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+++.+.|++++ .+++|++||..+..+.+....|+.+|+|
T Consensus        81 ~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHHHH
Confidence            99999999975 456777888999999999999999999999999998776 6899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----cch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----NDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++.++++++.++.+.|++++.++||+++|++.....    ... .........|.+++.+++|+++++.++++++..+++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFIT  238 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCc
Confidence            999999999999999999999999999999755431    111 111112233567788999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+++.+|||+++
T Consensus       239 g~~~~~~~g~~~  250 (250)
T TIGR03206       239 GQVLSVSGGLTM  250 (250)
T ss_pred             CcEEEeCCCccC
Confidence            999999999763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.1e-39  Score=271.54  Aligned_cols=238  Identities=29%  Similarity=0.438  Sum_probs=199.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.    ...+.++++|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            358999999999999999999999999999999999888777666652    2346677999999999999999999999


Q ss_pred             CCcCEEEeCCcCCC--CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-------
Q 024839           82 GSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-------  152 (262)
Q Consensus        82 ~~~d~li~~ag~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-------  152 (262)
                      +++|++||||+...  ...++.+.+.++|.+.+++|+.+++.++++++|.|++++ .++||++||..+..+..       
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcccc
Confidence            99999999997642  134677889999999999999999999999999998776 78999999987654321       


Q ss_pred             ---CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          153 ---GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       153 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                         ....|+++|+++++++++++.++.++||++++++||++.++...    ...... ....+..++.+|+|+++.++++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~----~~~~~~-~~~~~~~~~~~~~dva~~~~~l  235 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE----AFLNAY-KKCCNGKGMLDPDDICGTLVFL  235 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----HHHHHH-HhcCCccCCCCHHHhhhhHhhe
Confidence               22469999999999999999999999999999999999876421    111111 1112446788999999999999


Q ss_pred             cCCCCCceeceEEeeCCCcc
Q 024839          230 ASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +++.+.+++|+.+.+|||++
T Consensus       236 ~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        236 LSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eccccccccCceEEecCCcc
Confidence            99988999999999999975

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-40  Score=269.72  Aligned_cols=232  Identities=31%  Similarity=0.422  Sum_probs=196.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++||||+++||++++++|+++|++|++++|+.....       ..++.++++|++++      ++++.+.++++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~------~~~~~~~~~~i   68 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDD------LEPLFDWVPSV   68 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHH------HHHHHHhhCCC
Confidence            478999999999999999999999999999999998754321       14578899999987      44455566899


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||......++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++|+++
T Consensus        69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  147 (235)
T PRK06550         69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHAL  147 (235)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHHHHH
Confidence            99999999764345677889999999999999999999999999998776 78999999999988888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.++++++.++.++||++++|+||+++|++......... ........|.++..+|+|++++++||+++.+.+++|+++.
T Consensus       148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~  227 (235)
T PRK06550        148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVP  227 (235)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEE
Confidence            999999999999999999999999999998643322111 1111223466788999999999999999988999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+++
T Consensus       228 ~~gg~~~  234 (235)
T PRK06550        228 IDGGWTL  234 (235)
T ss_pred             ECCceec
Confidence            9999865

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-40  Score=274.70  Aligned_cols=238  Identities=26%  Similarity=0.282  Sum_probs=201.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-------HHHHHhhhC--CCceEEEEecCCCHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-------GNQVVSSIG--PEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.  ..++.++++|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            34679999999999999999999999999999999998643       233333332  246889999999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--C
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--S  152 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~  152 (262)
                      +++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.|.|++++ .++|++++|..+..+.  +
T Consensus        82 ~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCc-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccccccC
Confidence            99999999999999999975 446777889999999999999999999999999998876 7899999998877766  7


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC-CccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF-GVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      .+++|++||++++.|+++++.|++++||+||+|+|| +++|++.......        ..+..+..+|+++++.++++++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~--------~~~~~~~~~p~~va~~~~~l~~  231 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG--------DEAMRRSRTPEIMADAAYEILS  231 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc--------cccccccCCHHHHHHHHHHHhc
Confidence            788999999999999999999999999999999999 5888764432111        1234567899999999999999


Q ss_pred             CCCCceeceEEeeCCCccccc
Q 024839          232 DESAYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~~  252 (262)
                      +...++||+++ +|++..-..
T Consensus       232 ~~~~~~~G~~~-~~~~~~~~~  251 (273)
T PRK08278        232 RPAREFTGNFL-IDEEVLREA  251 (273)
T ss_pred             CccccceeEEE-eccchhhcc
Confidence            98889999977 677764433

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-39  Score=270.54  Aligned_cols=243  Identities=30%  Similarity=0.434  Sum_probs=208.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||+++||.++|++|+++|++|++++|+.++.+...+.+..  .++.++++|++|+++++++++++.+.++
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999998877666655532  4678899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHH-HHhCCCCcEEEEecCCCccCCCCC----Cccc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV-MVANKIRGSIICTTSTASTVGGSG----PHAY  157 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~~~~ii~isS~~~~~~~~~----~~~Y  157 (262)
                      ++|++|||||.. ...+..+.+.++|++.+++|+.+++.+++++.++ |.+++ .+++|++||..+..+.+.    ...|
T Consensus        89 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         89 HVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcchH
Confidence            999999999975 3456677889999999999999999999999998 66655 689999999877765543    4799


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++|++++.++++++.++.++||+++.++||+++|++.....+...... ....|..+..+++|+++.+.+++++.+.++
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  245 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDL-LAHTPLGRLGDDEDLKGAALLLASDASKHI  245 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999999999999999999998654433222222 223355778899999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      +|+.+.+|||.++
T Consensus       246 ~G~~~~~~~~~~~  258 (259)
T PRK08213        246 TGQILAVDGGVSA  258 (259)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999864

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1e-39  Score=269.25  Aligned_cols=234  Identities=28%  Similarity=0.363  Sum_probs=200.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|||||++|||+++|++|+++|++|++++|+ .+..+...+++.  ..++.++++|++++++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999988865 344555554442  2468899999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHH-HHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA-RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~-~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      |||+|... ..++.+.+.++|.+++++|+.+++.+++.++ |.+.+++ .++||++||..+..+.+....|+++|+++++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            99999863 3566778999999999999999999999875 4444444 6899999999999998899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ++++++.|++++||+++.++||+++|++.....+.....  ....|.++..+|+|+++.+.||+++.+.+++|+.+.+||
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA--LKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH--HhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            999999999999999999999999999876443222111  123466889999999999999999999999999999999


Q ss_pred             Cc
Q 024839          247 GF  248 (262)
Q Consensus       247 G~  248 (262)
                      |+
T Consensus       237 g~  238 (239)
T TIGR01831       237 GM  238 (239)
T ss_pred             Cc
Confidence            96

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-39  Score=297.88  Aligned_cols=246  Identities=34%  Similarity=0.485  Sum_probs=213.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ..++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++.++++|++++++++++++++.++++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG-PDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            3579999999999999999999999999999999999888887777765 467789999999999999999999999999


Q ss_pred             CEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           85 DIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      |+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|++++..++||++||..+..+.+.+.+|+++|++
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaa  160 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAA  160 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHH
Confidence            999999997432 3567788999999999999999999999999999876523499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH--hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE--GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +.+|+++++.|+.++||+|++|+||+++|++.........  ........+.++..+|+++++.+.|++++...+++|+.
T Consensus       161 l~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~  240 (520)
T PRK06484        161 VISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGST  240 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCce
Confidence            9999999999999999999999999999998654322111  11111123556778999999999999999999999999


Q ss_pred             EeeCCCcccc
Q 024839          242 LVVDGGFTAV  251 (262)
Q Consensus       242 i~~dgG~~~~  251 (262)
                      +.+|||+...
T Consensus       241 ~~~~gg~~~~  250 (520)
T PRK06484        241 LVVDGGWTVY  250 (520)
T ss_pred             EEecCCeecc
Confidence            9999997643

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-39  Score=271.62  Aligned_cols=246  Identities=28%  Similarity=0.356  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.    ..++.++++|++++++++++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877666555543    24678899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|++|||+|......++.+.+.++|.+++++|+.+++.+++++.+.|.+++ .++|+++||..+..+.+...+|++
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCCCCcchHH
Confidence            9999999999999764445677889999999999999999999999999998766 789999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|++++.+++.++.++...+|++++|+||+++|++.......... .......|..++.+++|+++++.|++++...+++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  241 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWIT  241 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            999999999999999999999999999999999987543222111 1111223567788999999999999998888999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.+++|||+.+
T Consensus       242 g~~~~~~~g~~~  253 (276)
T PRK05875        242 GQVINVDGGHML  253 (276)
T ss_pred             CCEEEECCCeec
Confidence            999999999876

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=267.91  Aligned_cols=240  Identities=35%  Similarity=0.451  Sum_probs=204.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|+++||||+++||+++|++|+++|++|+++.|+.+ ..++..+++.  ..++.++++|++++++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988876543 3344444432  2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+   .++||++||..+..+.+.+..|+++|
T Consensus        82 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCCCCchhHHHH
Confidence            9999999999986 3467778899999999999999999999999999853   47999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.++++++.++...|+++++++||++.|++.................|..+..+|+|+++.+.|++++.+.+++|+.
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  237 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQV  237 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccE
Confidence            99999999999999999999999999999999864432222211222234667888999999999999998888999999


Q ss_pred             EeeCCCc
Q 024839          242 LVVDGGF  248 (262)
Q Consensus       242 i~~dgG~  248 (262)
                      |.+|||.
T Consensus       238 ~~~~~g~  244 (245)
T PRK12937        238 LRVNGGF  244 (245)
T ss_pred             EEeCCCC
Confidence            9999986

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=268.58  Aligned_cols=244  Identities=40%  Similarity=0.584  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+...+..+.+. ..++.++++|++|+++++++++++.+++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999877766655553 246789999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.|++++ .++|+++||..+..+.+....|+.+|++
T Consensus        82 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  159 (252)
T PRK06138         82 LDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKGA  159 (252)
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHHHH
Confidence            99999999986 446677889999999999999999999999999998776 7899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---hHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---VEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++.++++++.+++.+|+++++++||.++|++.......   .....  .....+..++.+++|+++.+.+++++...+++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  239 (252)
T PRK06138        160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFAT  239 (252)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            99999999999999999999999999999986543211   11111  11123445678999999999999999889999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.+.+|||++.
T Consensus       240 g~~~~~~~g~~~  251 (252)
T PRK06138        240 GTTLVVDGGWLA  251 (252)
T ss_pred             CCEEEECCCeec
Confidence            999999999764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-39  Score=269.71  Aligned_cols=239  Identities=23%  Similarity=0.302  Sum_probs=202.6

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCC-----------chhHHHHHhhhC--CCceEEEEecCCCHHH
Q 024839            5 RLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQ-----------DELGNQVVSSIG--PEKASYRHCDVRDEKQ   69 (262)
Q Consensus         5 ~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   69 (262)
                      ++++|++|||||++  |||.+++++|+++|++|++++|+           .+....+.+.+.  ..++.++++|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46789999999994  99999999999999999999887           121111223322  2468899999999999


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV  149 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~  149 (262)
                      ++++++++.+.++++|+||||||+. ...++.+.+.+++++.+++|+.+++.+++++.+.|.++. .++||++||..+..
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccC
Confidence            9999999999999999999999986 456778889999999999999999999999999997665 68999999999888


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      +.+....|+++|+++++++++++.++..+||+|++++||+++|++......   ... ....+..+..+|+|+++.+.|+
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~---~~~-~~~~~~~~~~~~~~~a~~~~~l  235 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK---HHL-VPKFPQGRVGEPVDAARLIAFL  235 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH---Hhh-hccCCCCCCcCHHHHHHHHHHH
Confidence            888889999999999999999999999999999999999999987542211   111 1122446678999999999999


Q ss_pred             cCCCCCceeceEEeeCCCcc
Q 024839          230 ASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +++...+++|+++.+|||++
T Consensus       236 ~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        236 VSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             hCcccccccCCEEEecCCcc
Confidence            99988899999999999974

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-39  Score=267.63  Aligned_cols=241  Identities=32%  Similarity=0.388  Sum_probs=200.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|++|||||++|||.+++++|+++|++|+++. |+.+..+...+.+.  ..++.+++||++++++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999998764 55555555544442  2468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCC-Cccchhhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSG-PHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~-~~~Y~~sK  161 (262)
                      |++|||||......++.+.+.++|.+++++|+.+++.+++.+++.|..++  ..++||++||..+..+.+. +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            99999999865445677889999999999999999999999999987543  1468999999988777553 56899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++++++++++.++.++||+|+.++||+++|++.................|..+..+|+|+++.+++++++...+++|++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            99999999999999999999999999999999864321111111122233567788999999999999999988999999


Q ss_pred             EeeCCCc
Q 024839          242 LVVDGGF  248 (262)
Q Consensus       242 i~~dgG~  248 (262)
                      |.+|||.
T Consensus       242 ~~~~gg~  248 (248)
T PRK06947        242 LDVGGGR  248 (248)
T ss_pred             EeeCCCC
Confidence            9999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=270.34  Aligned_cols=245  Identities=35%  Similarity=0.474  Sum_probs=209.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||+++||++++++|+++|++|++++|+++..++..+.+..  .++.++++|+++.++++++++.+.+.+
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999998877776666532  467889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHH-HhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM-VANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      +++|+||||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.| ++.+ .++||++||..+..+.+....|+++
T Consensus        83 ~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         83 GSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             CCCCEEEECCccC-CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccHHH
Confidence            9999999999986 44666778889999999999999999999999999 5554 7899999999888888888899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--------HhHHH---hhhcccCCCCCHHHHHHHHHHH
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--------EGFVC---KVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      |++++.+++.++.++++.||+++.++||+++||+........        .....   ....+.+++++++|++++++++
T Consensus       161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l  240 (262)
T PRK13394        161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFL  240 (262)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999998754332111        01111   1122446789999999999999


Q ss_pred             cCCCCCceeceEEeeCCCccc
Q 024839          230 ASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++....+++|+.|.+|||+.+
T Consensus       241 ~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        241 SSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             cCccccCCcCCEEeeCCceec
Confidence            998878899999999999754

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-39  Score=265.38  Aligned_cols=241  Identities=32%  Similarity=0.372  Sum_probs=200.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|++|||||+++||.+++++|+++|++|+++.++ ++..++..+.+.  ..++.++++|+++.++++++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999887644 344444444442  2467889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCC-Cccchhhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSG-PHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~-~~~Y~~sK  161 (262)
                      |+||||||......++.+.+.++|.+++++|+.+++.+++++++.|.++.  .+|+||++||..+..+.+. +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            99999999865445677889999999999999999999999999997642  2479999999988887765 46799999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++++|+++++.++.++||++++++||++.||+.................|.++..+|+|+++.+.+++++...+++|+.
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  241 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTF  241 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence            99999999999999999999999999999999754322111111122234667778999999999999998888999999


Q ss_pred             EeeCCCc
Q 024839          242 LVVDGGF  248 (262)
Q Consensus       242 i~~dgG~  248 (262)
                      +.+|||.
T Consensus       242 ~~~~gg~  248 (248)
T PRK06123        242 IDVSGGR  248 (248)
T ss_pred             EeecCCC
Confidence            9999973

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-39  Score=265.11  Aligned_cols=244  Identities=28%  Similarity=0.391  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+..  .++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            346799999999999999999999999999999999998766666555422  357789999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCC--CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           82 GSLDIMYSNAGVAGP--VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        82 ~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++|+||||||+...  ..++.+.+.+++++.+++|+.+++.++++++++|.+++ .++||++||..+..+   ...|++
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~---~~~Y~~  157 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWLY---SNFYGL  157 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccCC---ccccHH
Confidence            999999999998632  34567788999999999999999999999999998766 789999999887643   568999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||++++.++++++.++...||+++.++||.++|++.................+..+..+|+|+++.+++++++...+.+|
T Consensus       158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g  237 (250)
T PRK07774        158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITG  237 (250)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCC
Confidence            99999999999999999999999999999999998765433221111112224456789999999999999887667899


Q ss_pred             eEEeeCCCcccc
Q 024839          240 HDLVVDGGFTAV  251 (262)
Q Consensus       240 ~~i~~dgG~~~~  251 (262)
                      +.+++|||.++.
T Consensus       238 ~~~~v~~g~~~~  249 (250)
T PRK07774        238 QIFNVDGGQIIR  249 (250)
T ss_pred             CEEEECCCeecc
Confidence            999999998875

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1e-38  Score=264.49  Aligned_cols=241  Identities=29%  Similarity=0.464  Sum_probs=204.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|+++||||+++||.+++++|+++|++|+++.+ ..+..++..+.+..  .++.++++|++++++++++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999987654 44555555444432  468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++|||||.. ....+.+.+.+++++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+.+..|+++|
T Consensus        83 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         83 GKVDILVNNAGIT-RDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHHH
Confidence            9999999999986 445667888999999999999999999999999998766 68999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++++++++++.++.+.||+++.++||+++|++............. ...+.+++..|+|+++++++++++. .+++|+.
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~edva~~~~~~~~~~-~~~~g~~  238 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIV-AKIPKKRFGQADEIAKGVVYLCRDG-AYITGQQ  238 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHH-HhCCCCCCcCHHHHHHHHHHHcCcc-cCccCCE
Confidence            9999999999999999999999999999999986644322222221 2234567899999999999999764 5899999


Q ss_pred             EeeCCCcc
Q 024839          242 LVVDGGFT  249 (262)
Q Consensus       242 i~~dgG~~  249 (262)
                      +++|||+.
T Consensus       239 ~~i~~g~~  246 (247)
T PRK12935        239 LNINGGLY  246 (247)
T ss_pred             EEeCCCcc
Confidence            99999974

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-39  Score=268.08  Aligned_cols=243  Identities=38%  Similarity=0.537  Sum_probs=211.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++++++++++++++.+..++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999887776666553  257889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||+|.. ...++.+.+.+++.+.+++|+.+++.+++.+++.|++++ .++||++||..+..+.+....|+++|++
T Consensus        82 ~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            99999999976 446777889999999999999999999999999998876 7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--------hHhH---HHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--------VEGF---VCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ++.+++.++.+++++||+++.++||+++||+.......        ....   ......+.+++++++|+++++.+++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  239 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF  239 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999876432111        0000   111122446789999999999999988


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      ....++|+.+.+|||+++
T Consensus       240 ~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        240 AAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             cccCccCCeEEeCCCEec
Confidence            878899999999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1e-38  Score=263.99  Aligned_cols=239  Identities=26%  Similarity=0.390  Sum_probs=205.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |++|||||+++||+++|++|+++|++|++++|+.+ ..++..+...  ..++.++++|++++++++++++.+.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999998854 2223323222  24688999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|++++ .++||++||..+..+.+....|+++|++++
T Consensus        83 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         83 ILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             EEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            999999986 446677889999999999999999999999999998766 789999999999888888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +|+++++.+++++||+++.++||++.|++........... .....|.++..+++|+++.+.+|+++.+.+++|+.+.+|
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQS-IVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN  239 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHH-HHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence            9999999999999999999999999999866543322111 112235677889999999999999888889999999999


Q ss_pred             CCccc
Q 024839          246 GGFTA  250 (262)
Q Consensus       246 gG~~~  250 (262)
                      ||+.|
T Consensus       240 ~g~~~  244 (245)
T PRK12824        240 GGLYM  244 (245)
T ss_pred             CCeec
Confidence            99865

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.8e-39  Score=266.06  Aligned_cols=238  Identities=31%  Similarity=0.417  Sum_probs=203.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++||||+++||++++++|+++|++|++++|+ .+.+++..+.+..    ..+..+++|++++++++++++++.++++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 6656555555432    2355688999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||||.. ..+++.+.+.+++.+++++|+.+++.+++.++|.|++++ .++||++||..+..+.+.+..|+++|++++
T Consensus        82 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            999999976 446777889999999999999999999999999998776 789999999999988888999999999999


Q ss_pred             HHHHHHHHHHCCCC--cEEEEEeCCCccCCCCCCCcc----chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          166 GLVRSAASELGKHG--IRVNCVSPFGVATPFSAGTIN----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       166 ~~~~~la~e~~~~g--i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      .|+++++.|+++++  |+++.|+||+++||+......    ...........+.+++.+|+|+++.+++|+++...+++|
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  239 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTG  239 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999998765  999999999999998653211    111111112335567889999999999999998899999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      +.+.+|||++.
T Consensus       240 ~~i~~~~g~~~  250 (251)
T PRK07069        240 AELVIDGGICA  250 (251)
T ss_pred             CEEEECCCeec
Confidence            99999999764

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=264.15  Aligned_cols=214  Identities=20%  Similarity=0.247  Sum_probs=180.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++   ++.++++|++++++++++++.+.+   ++|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPH---HLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEE
Confidence            5999999999999999999999999999999988777666554   356889999999999999887653   6999999


Q ss_pred             CCcCCCC-----CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           90 NAGVAGP-----VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        90 ~ag~~~~-----~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+|....     ...+.+ +.++|++++++|+.+++.++++++|.|++   .|+||+++|..    .+....|+++|+|+
T Consensus        76 ~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~----~~~~~~Y~asKaal  147 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN----PPAGSAEAAIKAAL  147 (223)
T ss_pred             CCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC----CCCccccHHHHHHH
Confidence            9985311     012333 57899999999999999999999999953   58999999976    24567999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      .+|+++++.|++++||+||+|+||+++|++.....          ..|.   .+|+|+++.+.||+++.+.++||+++.+
T Consensus       148 ~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~----------~~p~---~~~~~ia~~~~~l~s~~~~~v~G~~i~v  214 (223)
T PRK05884        148 SNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS----------RTPP---PVAAEIARLALFLTTPAARHITGQTLHV  214 (223)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc----------CCCC---CCHHHHHHHHHHHcCchhhccCCcEEEe
Confidence            99999999999999999999999999998642210          1121   3899999999999999999999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+..
T Consensus       215 dgg~~~  220 (223)
T PRK05884        215 SHGALA  220 (223)
T ss_pred             CCCeec
Confidence            999865

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-39  Score=276.44  Aligned_cols=226  Identities=29%  Similarity=0.331  Sum_probs=196.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++..  .++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            4468899999999999999999999999999999999999888877766532  46788999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||+. ..+++.+.+.++|++++++|+.+++.+++.++|+|++++ .|+||+++|..+..+.+....|++|
T Consensus        82 ~g~iD~lVnnAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         82 GGRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             cCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHHH
Confidence            89999999999986 557888999999999999999999999999999999876 7999999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHCCC-CcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKH-GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++.+|+++|+.|+.++ ||+|++|+||+++||+.........    ....+.....+|+++|+.+++++..+.
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~----~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG----RRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc----ccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999875 9999999999999998654321110    111123446799999999999996543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=5.7e-39  Score=269.25  Aligned_cols=238  Identities=24%  Similarity=0.313  Sum_probs=190.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhCC---CceEEEEecCCCHHHH----HHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGP---EKASYRHCDVRDEKQV----EETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i----~~~~~~~~~~   80 (262)
                      ++++||||++|||++++++|+++|++|++++|+ .+.++++.+++..   .++.++++|++|++++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987654 5566666555532   3567899999999866    5566666677


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCH-----------HHHHHHHHHHhhHHHHHHHHHHHHHHhCC-----CCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDM-----------AQFDRTIATNLAGSVMAVKYAARVMVANK-----IRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-----~~~~ii~isS  144 (262)
                      ++++|+||||||.... .++.+.+.           ++|.+++++|+.+++.+++++.|.|+.+.     ..+.|++++|
T Consensus        82 ~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            8999999999997532 34433332           36899999999999999999999986431     2468999999


Q ss_pred             CCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHH
Q 024839          145 TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVA  223 (262)
Q Consensus       145 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va  223 (262)
                      ..+..+.+.+.+|++||+|+++|+++++.|++++||+|++|+||++.++....  ......... ..|. .+..+|+|++
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~va  237 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--FEVQEDYRR-KVPLGQREASAEQIA  237 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--hhHHHHHHH-hCCCCcCCCCHHHHH
Confidence            99888888899999999999999999999999999999999999998763211  111111111 1233 3678999999


Q ss_pred             HHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          224 EAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       224 ~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++|++++.+.+++|+.+.+|||+++
T Consensus       238 ~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       238 DVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHHHhCcccCCcccceEEECCceec
Confidence            999999999999999999999999876

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=263.22  Aligned_cols=231  Identities=22%  Similarity=0.204  Sum_probs=200.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCC--HHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRD--EKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~--~~~i~~~~~~~~   78 (262)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.   ..++.++++|+++  .++++++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777666552   2356788999975  678999999999


Q ss_pred             HHh-CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           79 EKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        79 ~~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      +.+ +++|++|||||......++.+.+.++|.+.+++|+.+++.++++++|.|.+.+ .+++++++|..+..+.+....|
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y  160 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGGF  160 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccch
Confidence            888 78999999999865556778899999999999999999999999999998766 7899999999999888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCC-CcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKH-GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++||++++.|+++++.|+.++ +|+|++|+||+++||+.........         .....+++|+++.+.|++++.+.+
T Consensus       161 ~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  231 (239)
T PRK08703        161 GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA---------KSERKSYGDVLPAFVWWASAESKG  231 (239)
T ss_pred             HHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC---------ccccCCHHHHHHHHHHHhCccccC
Confidence            999999999999999999887 6999999999999998654322111         123459999999999999999999


Q ss_pred             eeceEEee
Q 024839          237 VSGHDLVV  244 (262)
Q Consensus       237 i~G~~i~~  244 (262)
                      +||++|.|
T Consensus       232 ~~g~~~~~  239 (239)
T PRK08703        232 RSGEIVYL  239 (239)
T ss_pred             cCCeEeeC
Confidence            99999864

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-39  Score=262.51  Aligned_cols=218  Identities=25%  Similarity=0.373  Sum_probs=195.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +.+|++||||||++|+|+++|.+|+++|+.+++.+.+.+...+..+++.. ++++.+.||+++.+++.+..++++++.|.
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999999999999999999999999999998887777777653 57999999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||+. +..++.+.+++++++++++|+.|++..+++++|.|.+.+ +|+||.++|.+|..+.++...|++||.|
T Consensus       115 V~ILVNNAGI~-~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~YcaSK~a  192 (300)
T KOG1201|consen  115 VDILVNNAGIV-TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCASKFA  192 (300)
T ss_pred             ceEEEeccccc-cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhhhHHH
Confidence            99999999998 567888999999999999999999999999999999987 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCC---CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGK---HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +.+|.++|..|+..   +||+...++|++++|+|..+. ....        ......+|+++|+.++..+..+
T Consensus       193 ~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~-~~~~--------~l~P~L~p~~va~~Iv~ai~~n  256 (300)
T KOG1201|consen  193 AVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA-TPFP--------TLAPLLEPEYVAKRIVEAILTN  256 (300)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC-CCCc--------cccCCCCHHHHHHHHHHHHHcC
Confidence            99999999999864   479999999999999998762 1111        1233679999999988776443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-38  Score=264.80  Aligned_cols=243  Identities=28%  Similarity=0.340  Sum_probs=205.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|++|||||+++||++++++|+++|++|++++|+.+ ..++..+.+.  ..++.++++|++++++++++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998743 3334434432  2468899999999999999999999999999


Q ss_pred             CEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-----CcEEEEecCCCccCCCCCCccch
Q 024839           85 DIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        85 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-----~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      |++|||+|... ...++.+.+.++|++.+++|+.+++.+++++.+.|.++..     .++||++||..+..+.+....|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999999753 2346778899999999999999999999999999987542     35799999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++|++++++++.++.++.++|+++++++||++.|++.................|..+..+|+|+++++.+++++...+++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~  241 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYST  241 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccC
Confidence            99999999999999999999999999999999999865443222222222233566788999999999999998888999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.+.+|||+++
T Consensus       242 G~~~~i~gg~~~  253 (256)
T PRK12745        242 GQAIHVDGGLSI  253 (256)
T ss_pred             CCEEEECCCeec
Confidence            999999999875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=3.7e-39  Score=268.79  Aligned_cols=234  Identities=21%  Similarity=0.210  Sum_probs=194.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAE----HGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++|||||++|||+++|++|++    +|++|++++|+.+.++++.+++..    .++.++++|++++++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999998888777666532    367889999999999999999998877


Q ss_pred             CCc----CEEEeCCcCCCCCC-CcCCC-CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCCCCCC
Q 024839           82 GSL----DIMYSNAGVAGPVG-TILDL-DMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        82 ~~~----d~li~~ag~~~~~~-~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~  154 (262)
                      ++.    |+||||||...... ...+. +.++|++++++|+.+++.+++.++|.|++++ ..++||++||..+..+.+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    69999999753322 23333 4789999999999999999999999998652 24799999999999888889


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc----hHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND----VEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      ..|++||+|+++|+++|+.|++++||+||+++||+++|++.....+.    ..........|.+++.+|+|+|+.+++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  241 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL  241 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999986532111    01111122346788999999999999999


Q ss_pred             CCCCCceeceEEee
Q 024839          231 SDESAYVSGHDLVV  244 (262)
Q Consensus       231 ~~~~~~i~G~~i~~  244 (262)
                      + .++++||+++.+
T Consensus       242 ~-~~~~~~G~~~~~  254 (256)
T TIGR01500       242 E-KDKFKSGAHVDY  254 (256)
T ss_pred             h-cCCcCCcceeec
Confidence            6 467999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=3e-38  Score=260.75  Aligned_cols=239  Identities=26%  Similarity=0.360  Sum_probs=205.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |++|||||+++||++++++|+++|++|+++.| +++..++..+++.  ..++.++++|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999998887 5444444443332  24688999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||+|.. ....+.+.+.+++.+.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+.+..|+++|++++
T Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            999999976 345677889999999999999999999999999998766 789999999998888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      .+++.++.++...||++++++||++.|++.....+...... ....|..+..+|+++++.+.||++++..+++|+.+.+|
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~  237 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSI-VAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN  237 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHH-HhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            99999999999999999999999999998654332222111 12246677889999999999999998889999999999


Q ss_pred             CCccc
Q 024839          246 GGFTA  250 (262)
Q Consensus       246 gG~~~  250 (262)
                      ||+++
T Consensus       238 gg~~~  242 (242)
T TIGR01829       238 GGLYM  242 (242)
T ss_pred             CCccC
Confidence            99753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-38  Score=262.32  Aligned_cols=241  Identities=29%  Similarity=0.382  Sum_probs=207.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+...++.++++|+.+++++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999999998888777776655678899999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ||++|... ..++.+.+.++|.+.+.+|+.+++.+++++.+.+.+++ .++||++||..+..+ .....|+.+|++++.+
T Consensus        82 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         82 VANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence            99999863 35677788999999999999999999999999998776 789999999766543 3567999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh--hhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK--VANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +++++.+++++||++++++||+++|++..............  ...+.+++..++|+++++.+|+++...+++|+.+.+|
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  238 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD  238 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeC
Confidence            99999999999999999999999999765432222222111  1235677899999999999999988889999999999


Q ss_pred             CCcccc
Q 024839          246 GGFTAV  251 (262)
Q Consensus       246 gG~~~~  251 (262)
                      ||+...
T Consensus       239 ~g~~~~  244 (257)
T PRK07074        239 GGLTAG  244 (257)
T ss_pred             CCcCcC
Confidence            998663

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-38  Score=260.76  Aligned_cols=241  Identities=35%  Similarity=0.463  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|+++||||+++||+++++.|+++|++|++++|+.++.+++.+...   ..++.+|++++++++++++.    .+
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~----~~   76 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG---CEPLRLDVGDDAAIRAALAA----AG   76 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CeEEEecCCCHHHHHHHHHH----hC
Confidence            346789999999999999999999999999999999999887766655433   56789999999988887765    46


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||+|.. ...+..+.+.++|++.+++|+.+++.+++++.+.+.+++..++||++||..+..+.+....|+.+|+
T Consensus        77 ~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~  155 (245)
T PRK07060         77 AFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKA  155 (245)
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHH
Confidence            899999999986 4466667889999999999999999999999999876543489999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++.+++.++.++.++||++++++||++.|++......... ........+.+++.+++|+++++.+++++...+++|+.
T Consensus       156 a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~  235 (245)
T PRK07060        156 ALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVS  235 (245)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcE
Confidence            99999999999999999999999999999997543222111 11111223567889999999999999999888999999


Q ss_pred             EeeCCCcccc
Q 024839          242 LVVDGGFTAV  251 (262)
Q Consensus       242 i~~dgG~~~~  251 (262)
                      |.+|||++++
T Consensus       236 ~~~~~g~~~~  245 (245)
T PRK07060        236 LPVDGGYTAR  245 (245)
T ss_pred             EeECCCccCC
Confidence            9999998763

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-38  Score=262.71  Aligned_cols=244  Identities=32%  Similarity=0.416  Sum_probs=207.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..+++|+++||||+++||++++++|+++|++ |++++|+.+......+++.  ..++.++++|+++++++.++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999 9999998776665554442  246778999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ...++.+.+.++|.+.+++|+.+++.+++.+++.|.+++..+++|++||..+..+.+....|+++
T Consensus        82 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  160 (260)
T PRK06198         82 FGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS  160 (260)
T ss_pred             hCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence            99999999999986 44667788999999999999999999999999999876435899999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----cchHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----NDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++++++++++.++...||+++.++||++.|++.....    .....+.  .....+.++..+++|+++.+.+++++..
T Consensus       161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  240 (260)
T PRK06198        161 KGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDES  240 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhh
Confidence            999999999999999999999999999999998742211    0111111  1123356778899999999999999988


Q ss_pred             CceeceEEeeCCCc
Q 024839          235 AYVSGHDLVVDGGF  248 (262)
Q Consensus       235 ~~i~G~~i~~dgG~  248 (262)
                      .+++|++|.+|||.
T Consensus       241 ~~~~G~~~~~~~~~  254 (260)
T PRK06198        241 GLMTGSVIDFDQSV  254 (260)
T ss_pred             CCccCceEeECCcc
Confidence            89999999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-39  Score=276.78  Aligned_cols=244  Identities=27%  Similarity=0.286  Sum_probs=206.8

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |++.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..  .++.++++|++|+++++++++.+.
T Consensus         1 ~~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          1 MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            677789999999999999999999999999999999999998887777666532  468899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|+
T Consensus        81 ~~~g~iD~lInnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  158 (334)
T PRK07109         81 EELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYC  158 (334)
T ss_pred             HHCCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHH
Confidence            9999999999999975 457788899999999999999999999999999998876 79999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHCC--CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC-
Q 024839          159 ISKHGLLGLVRSAASELGK--HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA-  235 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~-  235 (262)
                      ++|+++++|+++++.|+..  .+|+++.|+||.++||+......    .......+..+..+|+|+|+.++++++++.. 
T Consensus       159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~----~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~~~  234 (334)
T PRK07109        159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS----RLPVEPQPVPPIYQPEVVADAILYAAEHPRRE  234 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh----hccccccCCCCCCCHHHHHHHHHHHHhCCCcE
Confidence            9999999999999999975  47999999999999997543211    1111122445678999999999999987533 


Q ss_pred             -ceeceEEeeCCCccc
Q 024839          236 -YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 -~i~G~~i~~dgG~~~  250 (262)
                       ++.+..+.++.+..+
T Consensus       235 ~~vg~~~~~~~~~~~~  250 (334)
T PRK07109        235 LWVGGPAKAAILGNRL  250 (334)
T ss_pred             EEeCcHHHHHHHHHHh
Confidence             445555555555433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.1e-38  Score=259.39  Aligned_cols=242  Identities=29%  Similarity=0.441  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++++++|||||+++||.++++.|+++|++|++++|+.++.++..+++.  ..++.++++|++++++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999887776666553  24678899999999999999999998889


Q ss_pred             CcCEEEeCCcCCCCC-------CCc-CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           83 SLDIMYSNAGVAGPV-------GTI-LDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        83 ~~d~li~~ag~~~~~-------~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      ++|++|||+|.....       ..+ .+.+.++|..++++|+.+++.+.+.+.+.|.++...+.|+++||.. ..+.+..
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            999999999975321       112 5678899999999999999999999999998764367899998864 4566778


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..|+++|+|++.++++++.++.++||++++++||+++|++.....+..... .....|.+++.+++|+++.+.++++  +
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~l~~--~  237 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALER-LEKMIPVGRLGEPEEIAHTVRFIIE--N  237 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHH-HHhcCCcCCCcCHHHHHHHHHHHHc--C
Confidence            999999999999999999999999999999999999999875543332221 2223466778899999999999995  3


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .+++|+++.+|||+++
T Consensus       238 ~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        238 DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             CCcCCcEEEeCCCccC
Confidence            5889999999999864

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3.2e-38  Score=261.67  Aligned_cols=225  Identities=19%  Similarity=0.215  Sum_probs=192.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+++||||++|||+++|++|+ +|++|++++|+.++++++.+++..   ..+.+++||++|+++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 599999999999888877776642   2478899999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||||.... .++.+.+.+++.+++++|+.+++.+++.++|.|.+++.+|+||++||..+..+.+.+..|+++|+|++
T Consensus        80 ~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            99999998633 34556777888999999999999999999999987543689999999999998888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +|+++++.|++++||+||+++||+++|++.....+            .....+|+|+|+.++++++....   ++.+.++
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~~  223 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP------------APMSVYPRDVAAAVVSAITSSKR---STTLWIP  223 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC------------CCCCCCHHHHHHHHHHHHhcCCC---CceEEeC
Confidence            99999999999999999999999999998643221            11235899999999999986532   5568888


Q ss_pred             CCccc
Q 024839          246 GGFTA  250 (262)
Q Consensus       246 gG~~~  250 (262)
                      ++..+
T Consensus       224 ~~~~~  228 (246)
T PRK05599        224 GRLRV  228 (246)
T ss_pred             ccHHH
Confidence            87644

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=266.14  Aligned_cols=229  Identities=27%  Similarity=0.359  Sum_probs=194.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .++.++++|+++++++.++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998887777666642  367889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ..+++.+.+.++|++++++|+.+++.+++.++|.|.+++..|+||++||..+..+.+....|+++|
T Consensus        82 g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         82 GHVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence            9999999999986 457788899999999999999999999999999998765468999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH---hH-----HHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE---GF-----VCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +++.+|+++|+.|++++||++++++||+++|++.........   ..     ...........++|+|+++.++..+...
T Consensus       161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~  240 (275)
T PRK05876        161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN  240 (275)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998643211000   00     0000011234679999999999888544

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.1e-37  Score=258.65  Aligned_cols=244  Identities=37%  Similarity=0.532  Sum_probs=210.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++|++|||||+++||++++++|+++|++|++++|+.++.....+.+..  .++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999997776666555532  4588999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISK  161 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK  161 (262)
                      ++|++||++|... ..++.+.+.+++++.++.|+.+++.+++.+++.|.+++ .+++|++||..+. .+.+....|+++|
T Consensus        83 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHHH
Confidence            9999999999763 46677889999999999999999999999999998776 7899999999888 6777888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.+++.++.++++.|++++.++||.++|+..................|.+++.+++|+++++.+++++...+++|++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  240 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT  240 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcE
Confidence            99999999999999999999999999999999765443322111222223556789999999999999988888899999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +.+|||..+
T Consensus       241 ~~~~~g~~~  249 (251)
T PRK12826        241 LPVDGGATL  249 (251)
T ss_pred             EEECCCccC
Confidence            999999865

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=258.64  Aligned_cols=243  Identities=29%  Similarity=0.425  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|+++||||+++||+++|++|+++|++|++. .|+++..++..+.+.  ..++.++++|++|++++.++++++.++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999774 677776666655543  246788999999999999999999988


Q ss_pred             h------CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           81 Y------GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        81 ~------~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      +      +++|++|||||.. ....+.+.+.+.|++++++|+.+++.+++.+++.|.+   .+++|++||..+..+.+++
T Consensus        82 ~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~~~~~  157 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGS  157 (254)
T ss_pred             hccccCCCCccEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCCCCCC
Confidence            7      4799999999976 4466778899999999999999999999999998854   4699999999988888889


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|+++|++++.++++++.++.++|+++++++||+++|++........ .........+.++..+++|+++++.+++++.
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  237 (254)
T PRK12746        158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSD  237 (254)
T ss_pred             cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999999875442211 1111112234467789999999999999988


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.+++|+.++++||+.+
T Consensus       238 ~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        238 SRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             cCCcCCCEEEeCCCccC
Confidence            78899999999999754

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-37  Score=256.23  Aligned_cols=242  Identities=36%  Similarity=0.559  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++.+|++|||||+++||.+++++|+++|++|+++ +|+++..+...+.+.  ..++.++.+|+++++++.++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999998 898877766655543  2468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++.+.+.+.+++ .+++|++||..+..+.+...+|+.+|
T Consensus        82 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 GKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHHH
Confidence            9999999999987 556777889999999999999999999999999998776 78999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.+++.++.++..+|+++++++||+++|++.+...+........ ..+.++..+++++++.+.+++++....++|+.
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE-EIPLGRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh-cCCCCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            99999999999999999999999999999998876554332222211 23446678999999999999999988999999


Q ss_pred             EeeCCCcc
Q 024839          242 LVVDGGFT  249 (262)
Q Consensus       242 i~~dgG~~  249 (262)
                      +.+|+|++
T Consensus       239 ~~~~~~~~  246 (247)
T PRK05565        239 ITVDGGWT  246 (247)
T ss_pred             EEecCCcc
Confidence            99999975

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=2.2e-37  Score=288.36  Aligned_cols=245  Identities=31%  Similarity=0.409  Sum_probs=209.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+.    ..++..+++|++++++++++++++.++
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999877766655542    236778999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||.. ...++.+.+.++|...+++|+.+++.+++.+++.|++++..++||++||..+..+.+...+|+++
T Consensus       491 ~g~iDilV~nAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aS  569 (676)
T TIGR02632       491 YGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAA  569 (676)
T ss_pred             cCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHH
Confidence            99999999999976 44677788999999999999999999999999999876545799999999999998889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC--CCCCCc-----------cchHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATP--FSAGTI-----------NDVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      |+++++++++++.+++++||+||+|+||++.++  +.....           ............+.++.++|+|+++++.
T Consensus       570 KaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~  649 (676)
T TIGR02632       570 KAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVF  649 (676)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999643  221110           1111112233457788899999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCccc
Q 024839          228 FLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++++...++||+++.+|||+..
T Consensus       650 ~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       650 FLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHhCCcccCCcCcEEEECCCchh
Confidence            99998888999999999999753

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-37  Score=254.52  Aligned_cols=239  Identities=33%  Similarity=0.481  Sum_probs=201.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC----chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ----DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~----~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ++++|+++||||+++||+++|++|+++|++|++++|.    .+..++..+++.  ..++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999987653    333444444432  2467899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHH-HHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA-RVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~-~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      +.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++. +.+++++ .+++|++||..+..+.+.+..|
T Consensus        83 ~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         83 EEFGRLDILVNNAGIA-TDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCchh
Confidence            9999999999999986 34677788999999999999999999999999 5555554 6899999999998888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +.+|++++.++++++.++++.|+++++++||+++|++....... ..  .....+..+..+++|+++.+.+++++...++
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  237 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-EH--LLNPVPVQRLGEPDEVAALVAFLVSDAASYV  237 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-HH--HHhhCCCcCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999999986544321 11  1112344566799999999999998888899


Q ss_pred             eceEEeeCCCc
Q 024839          238 SGHDLVVDGGF  248 (262)
Q Consensus       238 ~G~~i~~dgG~  248 (262)
                      +|+.+.+|||+
T Consensus       238 ~g~~~~~~~g~  248 (249)
T PRK12827        238 TGQVIPVDGGF  248 (249)
T ss_pred             cCcEEEeCCCC
Confidence            99999999996

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-37  Score=252.59  Aligned_cols=230  Identities=26%  Similarity=0.289  Sum_probs=195.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||+++||++++++|+++|++|++++|+.+..         ....++++|++++++++++++++.+.+ ++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------FPGELFACDLADIEQTAATLAQINEIH-PVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------cCceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence            579999999999999999999999999999999986541         112578999999999999999998876 6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      +|||+|.. ...++.+.+.++|.+.+++|+.+++.+.+.++|.|++++ .++||++||.. ..+.+...+|+++|+++++
T Consensus        72 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~  148 (234)
T PRK07577         72 IVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAKSALVG  148 (234)
T ss_pred             EEECCCCC-CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc-ccCCCCchHHHHHHHHHHH
Confidence            99999986 446777889999999999999999999999999998876 78999999985 4566678899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      |+++++.+++++||++++|+||++.|++.....+......  .....+..+..+|+|+++.+.++++++..+++|+.|.+
T Consensus       149 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~  228 (234)
T PRK07577        149 CTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGV  228 (234)
T ss_pred             HHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEe
Confidence            9999999999999999999999999998654322111111  11123456677999999999999998888999999999


Q ss_pred             CCCcc
Q 024839          245 DGGFT  249 (262)
Q Consensus       245 dgG~~  249 (262)
                      |||..
T Consensus       229 ~g~~~  233 (234)
T PRK07577        229 DGGGS  233 (234)
T ss_pred             cCCcc
Confidence            99965

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.1e-36  Score=251.97  Aligned_cols=243  Identities=36%  Similarity=0.530  Sum_probs=206.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||+++||++++++|+++|++|+++.|+.+ ..+...+++.  ..++.++++|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999988777654 3444444332  2578889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++||++|.. ...+..+.+.+++++.+++|+.+++.+.+.+.+.+.+.+ .++++++||..+..+.+....|+.+|
T Consensus        82 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 GGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHHH
Confidence            9999999999986 345666788999999999999999999999999998766 68999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.+++.++.++...|+++++++||++++++............. ...+.++..+++|+++.+.+++.+...+++|+.
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAIL-AQIPLGRLGQPEEIASAVAFLASDEAAYITGQT  238 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHH-hcCCCCCCcCHHHHHHHHHHHcCcccCCccccE
Confidence            9999999999999999999999999999999886654322222222 123556778999999999999988778999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +++|||++|
T Consensus       239 ~~i~~~~~~  247 (248)
T PRK05557        239 LHVNGGMVM  247 (248)
T ss_pred             EEecCCccC
Confidence            999999876

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-37  Score=258.99  Aligned_cols=242  Identities=27%  Similarity=0.310  Sum_probs=203.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++..   ....++++|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999999988776666555431   2345689999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||+|.. ....+.+.+.++|.+.+++|+.+++.++++++|.|.+++..++||++||..+..+.+....|+++|+++.
T Consensus        81 ~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            999999976 4567788999999999999999999999999999977543689999999998888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|+++++.|++++||+|+.++||+++|++......     .............++..+|+++|+.+++++. ...+++|+
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~-~~~~~~~~  238 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVE-KNRYLVYT  238 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHh-cCCeEEec
Confidence            99999999999999999999999999998654311     1111111111123567899999999999996 45789999


Q ss_pred             EEeeCCCccccc
Q 024839          241 DLVVDGGFTAVT  252 (262)
Q Consensus       241 ~i~~dgG~~~~~  252 (262)
                      .+.+++|+.+..
T Consensus       239 ~~~~~~~~~~~~  250 (272)
T PRK07832        239 SPDIRALYWFKR  250 (272)
T ss_pred             CcchHHHHHHHh
Confidence            999999987754

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-37  Score=252.10  Aligned_cols=237  Identities=30%  Similarity=0.380  Sum_probs=206.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||+++||++++++|+++|++|++++|+.++..+..+.+....+..+.+|+.|.++++++++++.+.++
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999999887766655555444577888999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++||++|.. ...++.+.+.+++.+.+++|+.+++.+++++.+.+++++ .+++|++||..+..+.+....|+++|+
T Consensus        82 ~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (239)
T PRK12828         82 RLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAKA  159 (239)
T ss_pred             CcCEEEECCccc-CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHHHH
Confidence            999999999976 345666788999999999999999999999999998776 789999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.+++.++.++.+.|++++.+.||++++++.......         .+...+++++|+++++.+++++...+++|+.+
T Consensus       160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~  230 (239)
T PRK12828        160 GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD---------ADFSRWVTPEQIAAVIAFLLSDEAQAITGASI  230 (239)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc---------hhhhcCCCHHHHHHHHHHHhCcccccccceEE
Confidence            999999999999998999999999999999854322111         12244678999999999999988778999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       231 ~~~g~~~~  238 (239)
T PRK12828        231 PVDGGVAL  238 (239)
T ss_pred             EecCCEeC
Confidence            99999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.8e-37  Score=276.21  Aligned_cols=240  Identities=29%  Similarity=0.370  Sum_probs=204.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++|++|||||++|||++++++|+++|++|+++++..  +.+++..+++.   ..++++|++++++++++++.+.++++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG---GTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC---CeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999998853  33444444433   45789999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||||+. ....+.+.+.++|++++++|+.+++.+++.+.+.+..++ .++||++||..+..+.+....|+++|+
T Consensus       284 ~id~vi~~AG~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g~~~~~~Y~asKa  361 (450)
T PRK08261        284 GLDIVVHNAGIT-RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAGNRGQTNYAASKA  361 (450)
T ss_pred             CCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCChHHHHHHH
Confidence            999999999987 446778899999999999999999999999999765554 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      ++++|+++++.+++++||++|+|+||+++|++.......... ......+..+...|+|+++++.||+++.+.++||++|
T Consensus       362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~-~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i  440 (450)
T PRK08261        362 GVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATRE-AGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVV  440 (450)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHH-HHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEE
Confidence            999999999999999999999999999999886543221111 1122234566779999999999999999999999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||..+
T Consensus       441 ~v~g~~~~  448 (450)
T PRK08261        441 RVCGQSLL  448 (450)
T ss_pred             EECCCccc
Confidence            99998654

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=252.92  Aligned_cols=238  Identities=25%  Similarity=0.289  Sum_probs=197.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ..+|++|||||+++||++++++|+++|++|+++.++ .+..+.+.+.+.  ..++.++++|++|.+++.++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999887664 444545544442  24688899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|.++. .+++|+++|..+..+.+.+..|+++|+
T Consensus        87 ~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~~p~~~~Y~~sK~  164 (258)
T PRK09134         87 PITLLVNNASLF-EYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNLNPDFLSYTLSKA  164 (258)
T ss_pred             CCCEEEECCcCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCCCCCchHHHHHHH
Confidence            999999999976 345677889999999999999999999999999998765 789999999877777777789999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      ++++++++++.++.+. |++++++||++.|+....  ..... ......+.++..+++|+++++.++++.  .+++|+.+
T Consensus       165 a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~--~~~~~-~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~  238 (258)
T PRK09134        165 ALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS--PEDFA-RQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMI  238 (258)
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC--hHHHH-HHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEE
Confidence            9999999999999876 999999999998864221  11111 111123556778999999999999974  57899999


Q ss_pred             eeCCCcccc
Q 024839          243 VVDGGFTAV  251 (262)
Q Consensus       243 ~~dgG~~~~  251 (262)
                      .+|||..+.
T Consensus       239 ~i~gg~~~~  247 (258)
T PRK09134        239 AVDGGQHLA  247 (258)
T ss_pred             EECCCeecc
Confidence            999998543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=9.8e-37  Score=252.42  Aligned_cols=240  Identities=28%  Similarity=0.346  Sum_probs=200.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |++|||||+++||++++++|+++|++|+++ .|+.+..++..+.+.  ..++..+++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999764 566666555554442  24678899999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCC-CccchhhhH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSG-PHAYTISKH  162 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~-~~~Y~~sK~  162 (262)
                      ++|||+|......++.+.+.++|+.++++|+.+++.+++.+++.+.++.  ..+++|++||..+..+.+. +..|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            9999999765556677889999999999999999999999999997652  2578999999988777664 468999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.+++.++.++.++||++++++||+++||+.................|..+..+|+|+++.+.+++++...+++|+++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  241 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFI  241 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEE
Confidence            99999999999999999999999999999997543322211111222235566679999999999999988889999999


Q ss_pred             eeCCCc
Q 024839          243 VVDGGF  248 (262)
Q Consensus       243 ~~dgG~  248 (262)
                      .+|||.
T Consensus       242 ~~~g~~  247 (247)
T PRK09730        242 DLAGGK  247 (247)
T ss_pred             ecCCCC
Confidence            999974

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=254.16  Aligned_cols=247  Identities=34%  Similarity=0.492  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..+++|++|||||+++||++++++|+++|++|++++|+.+..++..+.....++.++.+|+++++++.++++++.+.+++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34789999999999999999999999999999999999887776666554346788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+|||++|.......+...+.++|.+.+++|+.+++.+++++++.+...+..++++++||..+..+.+....|+.+|++
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a  166 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWA  166 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHH
Confidence            99999999987455666788999999999999999999999999998776523789999998888888888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc----------hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND----------VEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ++.+++.++.+++..++++++++||+++|++.......          ..........+.+++.+++|+++++.+++++.
T Consensus       167 ~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  246 (264)
T PRK12829        167 VVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPA  246 (264)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999998999999999999999875332110          00011111124456899999999999999877


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      ..+++|+.+.+|||...
T Consensus       247 ~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        247 ARYITGQAISVDGNVEY  263 (264)
T ss_pred             ccCccCcEEEeCCCccc
Confidence            77889999999999753

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.8e-37  Score=262.61  Aligned_cols=237  Identities=22%  Similarity=0.185  Sum_probs=194.6

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           12 IIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        12 lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |||||++|||+++|++|+++| ++|++++|+.+..+++.+++..  .++.++++|+++.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998877777666642  4678899999999999999999998889999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCccCC-----------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTASTVG-----------------  150 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~~~~-----------------  150 (262)
                      ||||+.....++.+.+.++|++++++|+.+++.+++.++|.|++++. .|+||++||..+..+                 
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99998543345667899999999999999999999999999987531 479999999876421                 


Q ss_pred             ------------------CCCCccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCc-cCCCCCCCccchHhHHH-hh
Q 024839          151 ------------------GSGPHAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGV-ATPFSAGTINDVEGFVC-KV  209 (262)
Q Consensus       151 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~-~~  209 (262)
                                        ...+.+|++||+|...+++.+++++.+ .||+|++++||+| +|++.+........... ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                              123567999999999999999999975 6999999999999 78887543222111110 01


Q ss_pred             hcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          210 ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       210 ~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ..+.+++.+|++.++.+++++++.....+|+++..||+.
T Consensus       241 ~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        241 KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            123456789999999999999988778999999999874

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=256.01  Aligned_cols=217  Identities=32%  Similarity=0.409  Sum_probs=193.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.  ++.++.+|++++++++++++.+.+.++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999888777666554  47789999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||+. ...++.+.+.+++.+++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+++|+++
T Consensus        80 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~  157 (273)
T PRK07825         80 DVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAV  157 (273)
T ss_pred             CEEEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHHHHH
Confidence            9999999987 456778889999999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .+|+++++.|+.+.||+++.|+||++.|++.......          ......+|+|+++.+.+++.+...
T Consensus       158 ~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        158 VGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA----------KGFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc----------cCCCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999986543111          113467999999999999976543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-36  Score=256.20  Aligned_cols=221  Identities=25%  Similarity=0.300  Sum_probs=189.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++..+    .++.++++|++++++++++++++.+.++++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999999999999999999999877655432    34788999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      +|||||.. ..+++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|+++++
T Consensus        78 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  155 (273)
T PRK06182         78 LVNNAGYG-SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATKFALEG  155 (273)
T ss_pred             EEECCCcC-CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHHHHHHH
Confidence            99999986 557788899999999999999999999999999998876 7899999999888877777899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---------cchHh----H--HHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---------NDVEG----F--VCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~----~--~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+++++.|++++||++++++||+++|++.....         .....    .  ......+.++..+|+++|+.++++++
T Consensus       156 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        156 FSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999999753211         00000    0  01111245678899999999999998


Q ss_pred             CC
Q 024839          232 DE  233 (262)
Q Consensus       232 ~~  233 (262)
                      ..
T Consensus       236 ~~  237 (273)
T PRK06182        236 AR  237 (273)
T ss_pred             CC
Confidence            53

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.1e-36  Score=247.07  Aligned_cols=243  Identities=32%  Similarity=0.487  Sum_probs=206.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++|++|||||+++||++++++|+++|++|+++.|+.. ..+...+.+.  ..++.++++|++++++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999887666544 3333333332  2468899999999999999999999988


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|++||++|.. ...++.+.+.+++.+.+++|+.+++.+++.+.+++.+.+ .+++|++||..+..+.+....|+.+|
T Consensus        83 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 GRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCCCEEEECCccC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHHH
Confidence            9999999999975 556677889999999999999999999999999998776 78999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++++++.++.++.+.|++++.++||+++|++............ ....+.++..+++|+++.+.+++++...+++|++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  239 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQV  239 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCE
Confidence            999999999999999999999999999999998655432222111 1123556788999999999999988888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      ++++||..+
T Consensus       240 ~~i~~g~~~  248 (249)
T PRK12825        240 IEVTGGVDV  248 (249)
T ss_pred             EEeCCCEee
Confidence            999999865

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.9e-36  Score=248.59  Aligned_cols=231  Identities=23%  Similarity=0.365  Sum_probs=201.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCC--CHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVR--DEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~--~~~~i~~~~~~~~~   79 (262)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++..   .++.++.+|+.  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999998877666555532   45677888875  89999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|+||||||......++.+.+.++|.+.+++|+.+++.+++.++++|.+++ .++||++||..+..+.+.+.+|++
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCcccHH
Confidence            9999999999999865556777888999999999999999999999999998877 789999999998888888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +|++++.++++++.++...||+++++.||++.|++........         ...++.+|+|+++.+.|++++.+.+++|
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE---------DPQKLKTPEDIMPLYLYLMGDDSRRKNG  238 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc---------cccCCCCHHHHHHHHHHHhCccccccCC
Confidence            9999999999999999999999999999999998754332211         1245789999999999999999999999


Q ss_pred             eEEeeC
Q 024839          240 HDLVVD  245 (262)
Q Consensus       240 ~~i~~d  245 (262)
                      +++...
T Consensus       239 ~~~~~~  244 (247)
T PRK08945        239 QSFDAQ  244 (247)
T ss_pred             eEEeCC
Confidence            997654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=8.8e-36  Score=246.23  Aligned_cols=243  Identities=32%  Similarity=0.493  Sum_probs=208.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.+|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.  ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3567999999999999999999999999999999999887766655553  25688999999999999999999999899


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++||++|.. ...+..+.+.+++.+.++.|+.+++.+++.+.+++.+.+ .++||++||..+..+......|+.+|+
T Consensus        82 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         82 ALDILVNNAGIT-RDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            999999999976 446667888999999999999999999999999997766 689999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.++++++.++.+.|+++++++||.+.+++........... .....+.+..++++|+++.+.+++++...+++|+++
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  238 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAE-ILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVI  238 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            9999999999999999999999999999998765322211111 112235567889999999999999988888999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||..+
T Consensus       239 ~~~gg~~~  246 (246)
T PRK05653        239 PVNGGMYM  246 (246)
T ss_pred             EeCCCeeC
Confidence            99999754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-38  Score=236.68  Aligned_cols=243  Identities=30%  Similarity=0.466  Sum_probs=219.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ..+|-++|||||.+|+|++.|++|+++|+.|++.+..+.+.++..++++ .++.+.++|++++++++..+...+.+||++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            3568899999999999999999999999999999999999999999998 589999999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCC-----CcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-----CCCcEEEEecCCCccCCCCCC
Q 024839           85 DIMYSNAGVAGPVG-----TILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-----KIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        85 d~li~~ag~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~~~~ii~isS~~~~~~~~~~  154 (262)
                      |.+|||||+....+     .-...+.|++++.+++|+.|+|.+++...-.|-+.     +.+|.||+..|.+++.+..+.
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq  164 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ  164 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence            99999999853222     22346789999999999999999999888877542     237899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++|++||.++.+|+.-++++++..|||++.|.||.++||+.....+....+.+.......|+..|.|.+.++..+..  .
T Consensus       165 aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiie--n  242 (260)
T KOG1199|consen  165 AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIE--N  242 (260)
T ss_pred             hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHh--C
Confidence            99999999999999999999999999999999999999999998888888888877777889999999999999994  4


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .|++|+.|.+||-..|
T Consensus       243 p~lngevir~dgalrm  258 (260)
T KOG1199|consen  243 PYLNGEVIRFDGALRM  258 (260)
T ss_pred             cccCCeEEEecceecC
Confidence            6999999999997655

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-36  Score=251.12  Aligned_cols=238  Identities=24%  Similarity=0.284  Sum_probs=199.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||+++||++++++|+++|++|++++|+.+.++.+.+... .++.++++|++++++++++++.+.+.++++|+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999999999999999999999999999999887766655543 46788999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      +|||||.. ..+++.+.+.++|++.+++|+.+++.+++.++|.|++++ .+++|++||..+..+.+....|+++|++++.
T Consensus        81 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (275)
T PRK08263         81 VVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEG  158 (275)
T ss_pred             EEECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHHHHHHH
Confidence            99999986 456788899999999999999999999999999998876 7899999999999998889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc------cchHhHHHhh--hcccCCC-CCHHHHHHHHHHHcCCCCCce
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTI------NDVEGFVCKV--ANLKGIV-LKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~--~~~~~~~-~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++.++.+++++||+++.++||+++|++.....      ..........  ..+.+++ .+|+|+++.++++++++.  .
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--~  236 (275)
T PRK08263        159 MSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--P  236 (275)
T ss_pred             HHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--C
Confidence            999999999999999999999999999874211      1111111111  1234556 899999999999997653  3


Q ss_pred             eceEEeeCCCcc
Q 024839          238 SGHDLVVDGGFT  249 (262)
Q Consensus       238 ~G~~i~~dgG~~  249 (262)
                      .++++...++..
T Consensus       237 ~~~~~~~~~~~~  248 (275)
T PRK08263        237 PLRLFLGSGVLD  248 (275)
T ss_pred             CeEEEeCchHHH
Confidence            466666555443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=246.81  Aligned_cols=233  Identities=21%  Similarity=0.276  Sum_probs=193.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++++||||+++||.+++++|+++|++|++++|+.+.++.+.+.++ .++.++.+|+++.++++++++++.+.++++|++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            369999999999999999999999999999999887777666554 4688999999999999999999999999999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||+|......++.+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|+++|+++++|+
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~  158 (248)
T PRK10538         80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFS  158 (248)
T ss_pred             ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHHHHHHHHH
Confidence            9999753345667889999999999999999999999999998776 789999999998888888899999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGT-INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.++.++.++||++++|+||++.+++.... ........... .......+|+|+|++++++++....+.+++....
T Consensus       159 ~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~  234 (248)
T PRK10538        159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-YQNTVALTPEDVSEAVWWVATLPAHVNINTLEMM  234 (248)
T ss_pred             HHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh-ccccCCCCHHHHHHHHHHHhcCCCcccchhhccc
Confidence            999999999999999999999985443221 11111111111 0123457999999999999987776666665433

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=250.79  Aligned_cols=225  Identities=26%  Similarity=0.303  Sum_probs=191.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||+||||++++++|+++|++|++++|+.+..+.+.+... .++.++++|+++++++.++++.+.+.++++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP-DRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            37899999999999999999999999999999999887766544432 46788999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||.. ...++.+.+.++|.+++++|+.+++.++++++|+|++++ .++||++||..+..+.+++.+|+++|++++.
T Consensus        82 vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~  159 (277)
T PRK06180         82 LVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEG  159 (277)
T ss_pred             EEECCCcc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence            99999986 456788899999999999999999999999999998776 6899999999999888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-------cchHhHHH-----hhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-------NDVEGFVC-----KVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++++++.+++++|+++++++||+++|++.....       ........     ....+..++.+|+|+++++.+++..+.
T Consensus       160 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        160 ISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             HHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999998744321       11111110     111234567899999999999997653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=246.98  Aligned_cols=243  Identities=25%  Similarity=0.335  Sum_probs=199.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++|++|||||+++||++++++|+++|++|++..|+ .+......+.+.  ..++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999998876654 333333322221  135778999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++++.|.|++   .+++|++||..+..+.++...|+++
T Consensus        82 ~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         82 YGVADILVNNAGLG-LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCCCchHHHHH
Confidence            99999999999985 4466777888999999999999999999999999854   4799999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      |++++.++++++.++++ +|+++.+.||+++|++.......   ..........+.+++.+|+|++++++++++.  ..+
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~  234 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESI  234 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--ccc
Confidence            99999999999999988 99999999999999875432110   0111111123446789999999999999964  367


Q ss_pred             eceEEeeCCCcccccC
Q 024839          238 SGHDLVVDGGFTAVTN  253 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~  253 (262)
                      +|+.+++|+|+.+..+
T Consensus       235 ~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        235 TGQVFVLDSGESLKGG  250 (252)
T ss_pred             CCCeEEecCCeeccCC
Confidence            8999999999987544

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.1e-36  Score=257.68  Aligned_cols=237  Identities=22%  Similarity=0.220  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.  ++.++++|++|.++++++++++.+.+++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--GVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            45689999999999999999999999999999999999887777666554  3788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------------CC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------------GG  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~  151 (262)
                      +|+||||||+...   ..+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||.....            +.
T Consensus       100 iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~  175 (315)
T PRK06196        100 IDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGY  175 (315)
T ss_pred             CCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCC
Confidence            9999999997532   23466788999999999999999999999998776 68999999975432            22


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH---hHHHhhhccc-CCCCCHHHHHHHHH
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE---GFVCKVANLK-GIVLKAKHVAEAAL  227 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~va~~~~  227 (262)
                      +.+..|+.||++++.+++.++.+++++||++++|+||++.|++.........   .+......+. .++.+|+++|..++
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  255 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQV  255 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHH
Confidence            3456899999999999999999999999999999999999998654432111   1111111122 24679999999999


Q ss_pred             HHcCCCCCceeceEEeeCC
Q 024839          228 FLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dg  246 (262)
                      |+++.+....+|..+..|.
T Consensus       256 ~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        256 WAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHhcCCccCCCCCeEeCCC
Confidence            9997654433444444443

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-35  Score=244.43  Aligned_cols=226  Identities=26%  Similarity=0.310  Sum_probs=195.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..+++.+.+..  .++.++++|+++++++.++++.+.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999998877666555432  468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||+|.. ...++.+.+.+++++++++|+.+++.+++.+++.|.+++ .++||++||..+..+.+.+..|+++|+++
T Consensus        85 d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMA-YTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCcc-CCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            9999999976 446777888999999999999999999999999998776 68999999999888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +.++++++.+++++||++++|.||+++|++.......     ..  ....+..+++|+++.+.++++++...+.++.
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-----~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-----AD--FDRSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc-----cc--cccccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            9999999999999999999999999999985432110     00  0123467999999999999998876665554

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4e-35  Score=242.94  Aligned_cols=240  Identities=27%  Similarity=0.336  Sum_probs=197.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++|++|||||+++||++++++|+++|++|++++|+.+ ..+...+.+.   ...+.++++|+++.+++.++++.+.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999998643 3333333332   2457889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||.. ...++.+.+.+++++.+++|+.+++.+++++.|.+.++  .+.+++++|..+..+.++...|+.+|
T Consensus        84 ~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         84 GRLDALVNNASSF-YPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            9999999999976 33566677889999999999999999999999998664  47888888887777778889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.+++.++.++.+ ++++++++||+++||+.................+..+..+++|+++++.+++.+ ..+++|++
T Consensus       161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~  238 (249)
T PRK09135        161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQI  238 (249)
T ss_pred             HHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcE
Confidence            9999999999999965 799999999999999864432222221222233456677999999999999875 45789999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +++++|...
T Consensus       239 ~~i~~g~~~  247 (249)
T PRK09135        239 LAVDGGRSL  247 (249)
T ss_pred             EEECCCeec
Confidence            999999864

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-36  Score=248.83  Aligned_cols=236  Identities=20%  Similarity=0.236  Sum_probs=194.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC--c-
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS--L-   84 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~--~-   84 (262)
                      |++|||||++|||++++++|+++|++|++++|+. +.++++.+... .++.++++|++++++++++++++.+.++.  + 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYN-SNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccC-CceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            6899999999999999999999999999999986 44444433332 46889999999999999999998877653  2 


Q ss_pred             -CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           85 -DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        85 -d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                       +++|+|+|......++.+.+.++|.+.+++|+.+++.+++.++|.|++.+..++||++||..+..+.+...+|+++|+|
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence             2899999986555678889999999999999999999999999999875435799999999998888889999999999


Q ss_pred             HHHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCc---cchHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          164 LLGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTI---NDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       164 ~~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++.|++.++.|++  ++||+|++|.||++.|++.....   ......  ......+.++..+|+|+++.+++++++. .+
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~  239 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DF  239 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cC
Confidence            9999999999985  56999999999999999754211   111000  0111225577899999999999999874 78


Q ss_pred             eeceEEeeCC
Q 024839          237 VSGHDLVVDG  246 (262)
Q Consensus       237 i~G~~i~~dg  246 (262)
                      ++|+.+.+|+
T Consensus       240 ~~G~~~~v~~  249 (251)
T PRK06924        240 PNGEVIDIDE  249 (251)
T ss_pred             CCCCEeehhh
Confidence            9999999885

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=246.30  Aligned_cols=216  Identities=26%  Similarity=0.304  Sum_probs=187.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .++.++++|++++++++++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47899999999999999999999999999999998887776666543 26889999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      +|||+|.........+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||++++.
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            999999764322233378899999999999999999999999998876 7999999999999998889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+++++.|++++||++++++||+++|++......           +.....+|+++++.++..+.....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~a~~~~~~l~~~~~  218 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPY-----------PMPFLMDADRFAARAARAIARGRR  218 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCCC-----------CCCCccCHHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999997543210           112346899999999999976543

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-35  Score=275.99  Aligned_cols=245  Identities=37%  Similarity=0.500  Sum_probs=212.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+.||++|||||+++||++++++|+++|++|++++|+.+..+...+.+.. .++.++.+|++++++++++++++.+.+++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999998887777666543 46889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.+.+.|++++..|+||++||..+..+.+...+|+++|++
T Consensus       499 iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa  577 (681)
T PRK08324        499 VDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAA  577 (681)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHH
Confidence            99999999986 45778889999999999999999999999999999886634899999999999988889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCc--cCCCCCCCcc---------chH--hHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGV--ATPFSAGTIN---------DVE--GFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v--~t~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +++++++++.+++++||++|.|+||.+  .|++......         ...  ........+.++.++++|+++++.+++
T Consensus       578 ~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~  657 (681)
T PRK08324        578 ELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLA  657 (681)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHh
Confidence            999999999999999999999999999  7776433210         000  012223346678899999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.....+|+.+.+|||...
T Consensus       658 s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        658 SGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             CccccCCcCCEEEECCCchh
Confidence            87778899999999999765

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=249.39  Aligned_cols=221  Identities=22%  Similarity=0.251  Sum_probs=186.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d~   86 (262)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.++++.+    ..+.++.+|++|+++++++++.+.+.+ +++|+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            6899999999999999999999999999999999887665543    247789999999999999999998776 68999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      +|||||.. ..+++.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||+++++
T Consensus        80 li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  157 (277)
T PRK05993         80 LFNNGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAIEG  157 (277)
T ss_pred             EEECCCcC-CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence            99999976 456778899999999999999999999999999998876 7899999999999888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch------------HhH------HHhhhcccCCCCCHHHHHHHHHH
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV------------EGF------VCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------------~~~------~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                      |+++++.|++++||+|++|+||+++|++........            ..+      ......+.....+|+++++.++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~  237 (277)
T PRK05993        158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH  237 (277)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence            999999999999999999999999999865431110            000      00001122235699999999999


Q ss_pred             HcCCCC
Q 024839          229 LASDES  234 (262)
Q Consensus       229 l~~~~~  234 (262)
                      .+....
T Consensus       238 a~~~~~  243 (277)
T PRK05993        238 ALTAPR  243 (277)
T ss_pred             HHcCCC
Confidence            987653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-35  Score=273.54  Aligned_cols=229  Identities=28%  Similarity=0.331  Sum_probs=196.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+.++++|||||++|||++++++|+++|++|++++|+.+..+++.+.+..  .++.++++|+++++++.++++++.+.++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999998887776666532  4688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||||+. ..+++.+.+.++|++++++|+.+++.++++++|.|++++..|+||++||.++..+.+....|++||+
T Consensus       392 ~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  470 (582)
T PRK05855        392 VPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKA  470 (582)
T ss_pred             CCcEEEECCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHH
Confidence            999999999986 4567888999999999999999999999999999988764589999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----ch-HhHHHh-hhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DV-EGFVCK-VANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~-~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++|+++++.|++++||+|++|+||+++|++......     +. ...... ...+..+..+|+++++.+++.+....
T Consensus       471 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        471 AVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999998765321     00 000011 11122345699999999999997654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.9e-35  Score=245.86  Aligned_cols=241  Identities=35%  Similarity=0.495  Sum_probs=204.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++++++++++++++.+..+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999999999999999999877776666543  24688999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++||+++... .....+.+.+++++++++|+.+++.+++.+++.|++.+ .+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            9999999863 35556778899999999999999999999999998766 789999999988888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--------HhHH---HhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--------EGFV---CKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      .+++.++.++...+++++.++||++++++........        ....   .....+.+.+++++|+++++++++++..
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  238 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAA  238 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccc
Confidence            9999999999989999999999999998743221100        0000   0112234568899999999999998766


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      ..++|+.+++|||+++
T Consensus       239 ~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       239 AGITGQAIVLDGGWTA  254 (255)
T ss_pred             cCccceEEEEcCcccc
Confidence            6789999999999875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.2e-35  Score=254.69  Aligned_cols=211  Identities=24%  Similarity=0.270  Sum_probs=175.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .|++++||||++|||+++|++|+++|++|++++|+.++++++.+++.    ..++..+.+|+++  ++.+.++++.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999998887776653    2467888999985  23344444444444


Q ss_pred             --CcCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-C-CCCCccc
Q 024839           83 --SLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-G-GSGPHAY  157 (262)
Q Consensus        83 --~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-~-~~~~~~Y  157 (262)
                        ++|++|||||+... ...+.+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+.. + .+..+.|
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchHH
Confidence              46699999998643 24677889999999999999999999999999998877 79999999998864 3 4778899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ++||+++++|+++|+.|++++||+|++++||+++|++......           . ....+|+++|+.++..+..
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~-----------~-~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS-----------S-FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC-----------C-CCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999998652110           0 1135899999999998854

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=249.70  Aligned_cols=219  Identities=27%  Similarity=0.296  Sum_probs=185.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++.+.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999888777666553  246788999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCC--CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-CCCCCccc
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDL--DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-GGSGPHAY  157 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y  157 (262)
                      ++++|++|||||... ..++.+.  +++++.+.+++|+.+++.++++++|.|++++ .++||++||..+.. +.+....|
T Consensus       115 ~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~Y  192 (293)
T PRK05866        115 IGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSVY  192 (293)
T ss_pred             cCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcchH
Confidence            999999999999863 3444432  4688999999999999999999999998876 78999999976654 35677899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +++|+|+++|+++++.|++++||++++++||+++|++.......          ......+|+++|+.++..+...
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----------~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----------DGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----------cCCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999987532110          0122469999999999988654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=7.5e-37  Score=238.65  Aligned_cols=232  Identities=25%  Similarity=0.314  Sum_probs=194.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh---hCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS---IGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++||.|++||+.+|||++++++|+++|..+.++.-+.|..++.++.   .+..++.+++||+++..+++++++++...
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999888777776665443322   23368999999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccch
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      +|.+|++||+||+.         ++.+|++.+.+|+.|.+.-+..++|+|.++.  ..|-||++||..+..|.+..+.|+
T Consensus        81 fg~iDIlINgAGi~---------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~  151 (261)
T KOG4169|consen   81 FGTIDILINGAGIL---------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA  151 (261)
T ss_pred             hCceEEEEcccccc---------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence            99999999999986         4677999999999999999999999998754  478999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHH--HCCCCcEEEEEeCCCccCCCCCCC-----ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          159 ISKHGLLGLVRSAASE--LGKHGIRVNCVSPFGVATPFSAGT-----INDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e--~~~~gi~v~~i~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      +||+++.+|+|++|..  |.+.||+++++|||++.|.+....     ..+..+...+...... ..+|++++..+...+.
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~-~q~~~~~a~~~v~aiE  230 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP-KQSPACCAINIVNAIE  230 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc-cCCHHHHHHHHHHHHh
Confidence            9999999999999875  446699999999999999875544     2222222222222212 4589999999999996


Q ss_pred             CCCCceeceEEeeCCCc
Q 024839          232 DESAYVSGHDLVVDGGF  248 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~  248 (262)
                      .   ..||+.+.+|+|.
T Consensus       231 ~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  231 Y---PKNGAIWKVDSGS  244 (261)
T ss_pred             h---ccCCcEEEEecCc
Confidence            6   4789999999997

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.9e-36  Score=229.06  Aligned_cols=186  Identities=24%  Similarity=0.300  Sum_probs=171.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.|.|+|||||++|||+++|++|.+.|-+|++++|++++++++.++..  ..+...||+.|.++.+++++++.++++.+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p--~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP--EIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc--chheeeecccchhhHHHHHHHHHhhCCch
Confidence            4679999999999999999999999999999999999999999887765  47889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCc-CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           85 DIMYSNAGVAGPVGTI-LDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +++|||||+.....-. .+.+.++..+.+++|+.+|.++++.++|++++++ .+.||++||.-+..|....+.|+++|+|
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTKAa  158 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKAA  158 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhHHH
Confidence            9999999997432222 2455777889999999999999999999999988 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATP  193 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~  193 (262)
                      +..++.+|..+++..+|.|.-+.|..|+|+
T Consensus       159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         159 IHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999997

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=2e-35  Score=243.12  Aligned_cols=221  Identities=20%  Similarity=0.228  Sum_probs=182.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |+++||||++|||+++|++|+++|  +.|++..|+....      ....+++++++|++++++++++.    ++++++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQHDNVQWHALDVTDEAEIKQLS----EQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cccCceEEEEecCCCHHHHHHHH----HhcCCCCE
Confidence            479999999999999999999985  5566656654321      22346889999999999988754    45678999


Q ss_pred             EEeCCcCCCC-----CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC---CCCCCccch
Q 024839           87 MYSNAGVAGP-----VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV---GGSGPHAYT  158 (262)
Q Consensus        87 li~~ag~~~~-----~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~---~~~~~~~Y~  158 (262)
                      +|||||....     ...+.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++++++||..+..   +.+.+..|+
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~  149 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYR  149 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchhh
Confidence            9999998642     23567788899999999999999999999999997765 68999998865533   235667999


Q ss_pred             hhhHHHHHHHHHHHHHHCC--CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          159 ISKHGLLGLVRSAASELGK--HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++|+++++|+++|+.|+++  ++|+|++|+||+++|++......         ..|.++..+|+|+++.+.+++++...+
T Consensus       150 asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~~~  220 (235)
T PRK09009        150 ASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ---------NVPKGKLFTPEYVAQCLLGIIANATPA  220 (235)
T ss_pred             hhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh---------ccccCCCCCHHHHHHHHHHHHHcCChh
Confidence            9999999999999999987  69999999999999998653211         124466789999999999999998889


Q ss_pred             eeceEEeeCCCcc
Q 024839          237 VSGHDLVVDGGFT  249 (262)
Q Consensus       237 i~G~~i~~dgG~~  249 (262)
                      ++|+++.+|||+.
T Consensus       221 ~~g~~~~~~g~~~  233 (235)
T PRK09009        221 QSGSFLAYDGETL  233 (235)
T ss_pred             hCCcEEeeCCcCC
Confidence            9999999999974

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=6.8e-35  Score=249.88  Aligned_cols=240  Identities=21%  Similarity=0.171  Sum_probs=190.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+|++|||||++|||+++|++|+++| ++|++++|+.++.+++.+++..  .++.++++|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 9999999998887777666642  46778899999999999999999988899


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCC------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVG------------  150 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~------------  150 (262)
                      +|++|||||+.....+..+.+.++|++++++|+.+++.+++.++|.|++++ ..++||++||..+..+            
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999753333344678899999999999999999999999998753 1479999999876421            


Q ss_pred             ---------------------CCCCccchhhhHHHHHHHHHHHHHHC-CCCcEEEEEeCCCc-cCCCCCCCccchHhHHH
Q 024839          151 ---------------------GSGPHAYTISKHGLLGLVRSAASELG-KHGIRVNCVSPFGV-ATPFSAGTINDVEGFVC  207 (262)
Q Consensus       151 ---------------------~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~  207 (262)
                                           ...+.+|++||+|+..+++.+++++. ++||+|++|+||++ .|++.+...........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence                                 12356799999999999999999995 46999999999999 69987643221111110


Q ss_pred             h-hhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          208 K-VANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       208 ~-~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      . .......+.+|++.++.+++++.+.....+|.++..++
T Consensus       242 ~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       242 PFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            0 01112346799999999999887654445788776544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=8.8e-35  Score=241.51  Aligned_cols=237  Identities=39%  Similarity=0.589  Sum_probs=196.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh--HHHHHhhhC-C--CceEEEEecCCC-HHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL--GNQVVSSIG-P--EKASYRHCDVRD-EKQVEETVAYAI   78 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~~~~-~--~~~~~~~~D~~~-~~~i~~~~~~~~   78 (262)
                      .+.+|++|||||++|||+++|+.|+++|+.|+++.++.+.  .+.+.+... .  ..+.+.++|+++ +++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888877554  222222211 1  257788899998 999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-Cccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-PHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y  157 (262)
                      +.+|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.+.|.++  + + +||++||..+. +.+. +.+|
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~-~-~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK--K-Q-RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh--h-C-eEEEECCchhc-CCCCCcchH
Confidence            99999999999999863224788899999999999999999999998888887  3 3 99999999998 7777 4999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ++||+|+.+|++.++.|++++||++++|+||++.|++........    .......  +..+...|++++..+.++.+..
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARI--PLGRLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999877543322    1111111  4447888999999999998764


Q ss_pred             -CCceeceEEeeCCCc
Q 024839          234 -SAYVSGHDLVVDGGF  248 (262)
Q Consensus       234 -~~~i~G~~i~~dgG~  248 (262)
                       ..+++|+.+.+|||+
T Consensus       235 ~~~~~~g~~~~~~~~~  250 (251)
T COG1028         235 AASYITGQTLPVDGGL  250 (251)
T ss_pred             hhccccCCEEEeCCCC
Confidence             668999999999986

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-34  Score=239.51  Aligned_cols=221  Identities=32%  Similarity=0.420  Sum_probs=192.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |.++.+|+++||||+++||++++++|+++|++|++++|+.+..++..+++..  .++.++++|+++++++.++++++.++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998776665555432  46888999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||+|.. ..+.+.+.+.++|++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..+.+....|+.+
T Consensus        82 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s  159 (239)
T PRK07666         82 LGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSAS  159 (239)
T ss_pred             cCCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHHH
Confidence            99999999999976 445677889999999999999999999999999998876 7899999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |++++.+++.++.+++++||+++.++||++.|++........       . ......+++|+++.+..+++..
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~-~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-------G-NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-------c-CCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999764331110       0 1245679999999999999765

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-35  Score=244.54  Aligned_cols=223  Identities=28%  Similarity=0.391  Sum_probs=191.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++..  .++.++++|++++++++++++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999998887776665532  46888999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||+|.. ....+.+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+..+.|+++|+++++
T Consensus        81 lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            99999986 446778889999999999999999999999999998766 7899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh-hcccCCCCCHHHHHHHHHHHcCCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV-ANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |+++++.|++++||+++.|+||+++|++............... .......++++++|+.++..+.+.
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998765422211111110 011234579999999999999764

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-35  Score=245.24  Aligned_cols=241  Identities=22%  Similarity=0.297  Sum_probs=199.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+.    +.++.++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            57899999999999999999999999999999999877666554432    2468899999999999999 999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||+|.. ..+.+.+.+.+++++.+++|+.+++.+++.++|.|++.+ .++||++||..+..+.+....|+++|+
T Consensus        81 ~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         81 RIDLLVNNAGYA-NGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CeeEEEECCccc-ccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhHH
Confidence            999999999976 345677889999999999999999999999999998776 689999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhH----HHhhhcccCCCCCHHHHHHHHHH
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGF----VCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~----~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                      +++.|+++++.+++++||++++++||+++|++......          .....    ......+.+++.+|+|+++++.+
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999997542210          00000    11111234667899999999999


Q ss_pred             HcCCCCCceeceEEeeCCCcccccC
Q 024839          229 LASDESAYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~~~~  253 (262)
                      ++++...   +..+.++.|..++-.
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~~~~  260 (280)
T PRK06914        239 IAESKRP---KLRYPIGKGVKLMIL  260 (280)
T ss_pred             HHcCCCC---CcccccCCchHHHHH
Confidence            9987643   246777766655433

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=8.5e-35  Score=246.30  Aligned_cols=230  Identities=25%  Similarity=0.369  Sum_probs=190.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .++.++++|++|.++++++++.+.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999999998777766666532  467889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCC-----cEEEEecCCCccCCCCCCcc
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIR-----GSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~-----~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|+++..+     ++||++||..+..+.+..++
T Consensus        82 g~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         82 GAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            9999999999986 44677788999999999999999999999999999876532     79999999999998888899


Q ss_pred             chhhhHHHHHHHHHHHHHHCC--CCcEEEEEeCCCccCCCCCCCccchHh----------H--HHhhh--cccCCCCCHH
Q 024839          157 YTISKHGLLGLVRSAASELGK--HGIRVNCVSPFGVATPFSAGTINDVEG----------F--VCKVA--NLKGIVLKAK  220 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~----------~--~~~~~--~~~~~~~~~~  220 (262)
                      |+++|++++.|+++++.++..  .+|+++.++||++.|++..........          +  ..+..  .......+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  240 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE  240 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence            999999999999999999874  579999999999999986543211000          0  00000  0011236999


Q ss_pred             HHHHHHHHHcCCCC
Q 024839          221 HVAEAALFLASDES  234 (262)
Q Consensus       221 ~va~~~~~l~~~~~  234 (262)
                      |+|+.+..++....
T Consensus       241 dva~~i~~~~~~~~  254 (287)
T PRK06194        241 EVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999886543

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=243.79  Aligned_cols=220  Identities=27%  Similarity=0.284  Sum_probs=188.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|+++||||+++||++++++|+++|++|++++|+.+....      ..++.++++|++|+++++++++.+.+.++++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            36899999999999999999999999999999998665432      135788999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||.. ..+++.+.+.+++.+++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|++++.
T Consensus        77 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (270)
T PRK06179         77 LVNNAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEG  154 (270)
T ss_pred             EEECCCCC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHHHH
Confidence            99999986 457778889999999999999999999999999998877 7999999999999888888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHhH----HHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGF----VCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +++.++.|++++||++++++||+++|++.......      ....    ......+..+..+|+++++.+++++....
T Consensus       155 ~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        155 YSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             HHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999986543211      0000    01111234556799999999999997653

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=241.31  Aligned_cols=219  Identities=32%  Similarity=0.395  Sum_probs=190.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH-hCCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK-YGSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~~~d~l   87 (262)
                      |++|||||+++||++++++|+++|++|++++|+.+..+++.+.+...++.++++|+++.+++.++++.+.++ .+++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            789999999999999999999999999999999988887777665567899999999999999999998877 7899999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      |||||.. ....+.+.+.+++++++++|+.+++.+++++.++|+.++ .++||++||..+..+.+....|+.||++++++
T Consensus        82 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         82 FNNAGIL-RGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            9999986 446777889999999999999999999999999998776 78999999999999988899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      +++++.+++++||+++++.||++.|++...........   .....+...+|+++++.++.++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG---STKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhh---hHhhccCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999876421111111   111123357899999999999954

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=245.49  Aligned_cols=234  Identities=25%  Similarity=0.245  Sum_probs=186.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+ ..+.+.+++.  ..++.++++|++++++++++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            367999999999999999999999999999999988753 3444443332  2467889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-----CCCCCCcc
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-----VGGSGPHA  156 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-----~~~~~~~~  156 (262)
                      +++|++|||||.... .      ..++...+++|+.+++.+++.+.|+|.+   .+++|++||..+.     .+.+.+..
T Consensus        83 ~~~d~vi~~ag~~~~-~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~~~~  152 (248)
T PRK07806         83 GGLDALVLNASGGME-S------GMDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPEYEP  152 (248)
T ss_pred             CCCcEEEECCCCCCC-C------CCCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCccccH
Confidence            999999999986421 1      1135678899999999999999998843   4799999996543     22344678


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+.+|++++.+++.++.+++.+||+++++.||++.|++....... ..........|.+++.+|+|++++++++++  +.
T Consensus       153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~--~~  230 (248)
T PRK07806        153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT--AP  230 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh--cc
Confidence            999999999999999999999999999999999999865432111 111112233466789999999999999997  45


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      +++|+++.++||...
T Consensus       231 ~~~g~~~~i~~~~~~  245 (248)
T PRK07806        231 VPSGHIEYVGGADYF  245 (248)
T ss_pred             ccCccEEEecCccce
Confidence            789999999999754

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=248.30  Aligned_cols=238  Identities=23%  Similarity=0.237  Sum_probs=186.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.    ..++.++++|+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999887776666552    2468899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--------
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--------  150 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--------  150 (262)
                      +.++++|+||||||+...  +..+.+.++|+.++.+|+.+++.+++.++|.|++.  .++||++||..+..+        
T Consensus        89 ~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCccccc
Confidence            999999999999998632  33457889999999999999999999999999764  589999999876543        


Q ss_pred             ----CCCCccchhhhHHHHHHHHHHHHHH--CCCCcEEEEEeCCCccCCCCCCCcc---chHhH---HHhhhcc-cCCCC
Q 024839          151 ----GSGPHAYTISKHGLLGLVRSAASEL--GKHGIRVNCVSPFGVATPFSAGTIN---DVEGF---VCKVANL-KGIVL  217 (262)
Q Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~---~~~~~~~-~~~~~  217 (262)
                          .+.+..|+.||+|+.+|++.|+.++  ..+||+||+++||++.|++......   .....   ....... .....
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVG  244 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccC
Confidence                2345689999999999999999864  4678999999999999998644211   00011   1110000 11245


Q ss_pred             CHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          218 KAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      ++++-+...++++..+.. -+|..+.-.
T Consensus       245 ~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        245 TVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             CHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            889999999988865432 257665443

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-35  Score=249.63  Aligned_cols=238  Identities=21%  Similarity=0.204  Sum_probs=188.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.    ..++.++++|+++.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999877665544442    24688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----------
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----------  149 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----------  149 (262)
                      .++++|+||||||....   ..+.+.++++..+++|+.+++.+++.++|.|++.+ .++||++||..+..          
T Consensus        92 ~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~  167 (306)
T PRK06197         92 AYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQ  167 (306)
T ss_pred             hCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccC
Confidence            99999999999997532   23467788999999999999999999999998766 68999999986443          


Q ss_pred             ---CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEE--eCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHH
Q 024839          150 ---GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV--SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                         +.+...+|+.||+++++|++.++.+++++|++++++  +||++.|++.+.............. + ....++++-+.
T Consensus       168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~-~-~~~~~~~~g~~  245 (306)
T PRK06197        168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLA-P-LLAQSPEMGAL  245 (306)
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHH-h-hhcCCHHHHHH
Confidence               123456899999999999999999999888877665  6999999997654332221111111 1 12346777777


Q ss_pred             HHHHHcCCCCCceeceEEeeCCCc
Q 024839          225 AALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       225 ~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      .+++++.+ +...+|..+..||+.
T Consensus       246 ~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        246 PTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHhcC-CCcCCCeEEccCccc
Confidence            77777654 345689988887764

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=240.65  Aligned_cols=221  Identities=24%  Similarity=0.346  Sum_probs=190.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..++..+++.. .++.++++|++|+++++++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            46789999999999999999999999999999999998887777666522 4788999999999999999998876 789


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++.+.+.+++++.+++|+.+++.+++.++|+|.+++ .++||+++|..+..+.+....|+++|++
T Consensus        81 id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         81 INVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            99999999976 446777889999999999999999999999999998776 6899999999998888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +.+++++++.+++++||+|+++.||+++|++.........      .....+..+|+|+++.+++++....
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~------~~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALN------RALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccccc------ccccCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999987543211110      0112356799999999999997653

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=237.78  Aligned_cols=225  Identities=28%  Similarity=0.347  Sum_probs=186.6

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           12 IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        12 lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      |||||+++||++++++|+++|++|++++|+.+..+...+.+. ..++.++.+|+++++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            699999999999999999999999999999877766665553 24678899999999999888875    4789999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHHH
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS  170 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  170 (262)
                      +|.. ...++.+.+.+++++++++|+.+++.+++  .+.+  ++ .++||++||..+..+.+....|+++|+++++++++
T Consensus        77 ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADT-PGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--AP-GGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cC-CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            9986 34677788999999999999999999999  3444  23 68999999999998888899999999999999999


Q ss_pred             HHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          171 AASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       171 la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ++.|+..  |++++++||++.|++........ ....  .....+.++..+|+|+++++.+|+++  .+++|+.+.+|||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg  226 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence            9999975  99999999999999864322111 1111  11123556778999999999999974  5799999999999


Q ss_pred             ccc
Q 024839          248 FTA  250 (262)
Q Consensus       248 ~~~  250 (262)
                      +.+
T Consensus       227 ~~~  229 (230)
T PRK07041        227 HAI  229 (230)
T ss_pred             eec
Confidence            865

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=5.5e-34  Score=234.72  Aligned_cols=235  Identities=33%  Similarity=0.475  Sum_probs=198.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +||||++++||.+++++|+++|++|++++|+. +......+.+.  ..++.++++|++++++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 33333333332  1367899999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ||++|.. ...++.+.+.+++++.+++|+.+++.+++.+.+++.+++ .++++++||..+..+.+.+..|+++|++++.+
T Consensus        81 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            9999986 335566788899999999999999999999999987766 78999999999888888899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ++.++.++...|++++.++||+++|++.......... ......+..++.+++|+++.+++++.+...+++|+++++|+|
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKK-KILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHH-HHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            9999999999999999999999999876543222111 112223456788999999999999988777899999999999


Q ss_pred             c
Q 024839          248 F  248 (262)
Q Consensus       248 ~  248 (262)
                      +
T Consensus       238 ~  238 (239)
T TIGR01830       238 M  238 (239)
T ss_pred             c
Confidence            6

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-34  Score=237.38  Aligned_cols=214  Identities=21%  Similarity=0.242  Sum_probs=179.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchh-HHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDEL-GNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      -++|++|||||++|||+++|++|+++| ++|++++|+.+. .+++.+++.   ..+++++++|++|+++++++++++.+ 
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-
Confidence            368899999999999999999999995 999999998775 665555542   23688999999999999999999886 


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      .+++|++|||+|....... ...+.++..+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++|
T Consensus        85 ~g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~s  162 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEE-LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGST  162 (253)
T ss_pred             cCCCCEEEEeeecCCchhh-cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHH
Confidence            5899999999998633211 1224456678999999999999999999999877 7999999999887777778899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++.+|+++++.|+.++||++++++||+++|++......            .....+|+++|+.++..+.+..
T Consensus       163 Kaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~------------~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        163 KAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE------------APLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC------------CCCCCCHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999998753321            1224699999999999997653

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=237.19  Aligned_cols=227  Identities=26%  Similarity=0.308  Sum_probs=189.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++..|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.  ..++.++++|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3457899999999999999999999999999999998776665554442  14678899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||||.. ...+..+.+.+++.+.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+....|+++|+
T Consensus        87 ~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         87 EIEVLVSGAGDT-YFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             CCCEEEECCCcC-CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHHH
Confidence            999999999976 345667788999999999999999999999999998766 789999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhh----hcccCCCCCHHHHHHHHHHHcCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKV----ANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +++.+++.++.++.++||++++++||+++|++....... ........    ....+++.+++|++++++++++..
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999864432221 11111111    112356889999999999999764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3.4e-34  Score=224.06  Aligned_cols=242  Identities=26%  Similarity=0.295  Sum_probs=206.6

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ..|.||++||+|-.  ..|+-.||+.|.++|+++.++...+.   +.+++.++++  ...+++||+++.++++.+++++.
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence            45789999999987  68999999999999999999876653   3334444443  35689999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           79 EKYGSLDIMYSNAGVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      +++|++|+|||+.++..   ..+++.+.+.|.|...+++..++...+.+++.|.|..   .|.||.++=..+....|.+-
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~vPnYN  156 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERVVPNYN  156 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceeecCCCc
Confidence            99999999999999762   3457778999999999999999999999999999954   68999999888888888888


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..+.+|++++.-+|.||.++.++|||||+|+-|++.|=-.++.... ....  .+...|.++.+++|||++..+||+|+-
T Consensus       157 vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f-~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdL  235 (259)
T COG0623         157 VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDF-RKMLKENEANAPLRRNVTIEEVGNTAAFLLSDL  235 (259)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccH-HHHHHHHHhhCCccCCCCHHHhhhhHHHHhcch
Confidence            9999999999999999999999999999999999998544433221 1111  122348899999999999999999999


Q ss_pred             CCceeceEEeeCCCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~  251 (262)
                      ++.+|||++.||+|+.+.
T Consensus       236 ssgiTGei~yVD~G~~i~  253 (259)
T COG0623         236 SSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             hcccccceEEEcCCceee
Confidence            999999999999999774

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-33  Score=232.24  Aligned_cols=234  Identities=24%  Similarity=0.334  Sum_probs=195.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..+++.+.+.. .++.++++|++++++++++++++...+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999998877666555432 36788999999999999999999888899


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-CCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-GGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y~~sK~  162 (262)
                      +|.+|++++... ..++.  ..+++.+++++|+.+++.+.+.++|.+.+   .+++|++||..+.. +.+....|+++|+
T Consensus        82 id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         82 IDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            999999998652 23332  33889999999999999999999999853   47899999987643 5566788999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.+++.++.+++..||+++.++||+++|++.....      ............+++++++.+.+++++.+.+++|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~------~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~  229 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN------WKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVI  229 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh------hhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEE
Confidence            9999999999999999999999999999998743211      1111111234679999999999999988888999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||..+
T Consensus       230 ~~~~~~~~  237 (238)
T PRK05786        230 PVDGGARL  237 (238)
T ss_pred             EECCcccc
Confidence            99999765

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.2e-33  Score=241.50  Aligned_cols=240  Identities=20%  Similarity=0.166  Sum_probs=188.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.+++.+++.  ..++.++++|+++.++++++++++.+..
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34679999999999999999999999999999999999888777766663  2468899999999999999999988877


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCccC-----------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTASTV-----------  149 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~~~-----------  149 (262)
                      +++|+||||||+........+.+.++|+..+++|+.+++.+++.++|.|++++. .++||++||.....           
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence            889999999997643233346788999999999999999999999999987652 26999999965421           


Q ss_pred             ------------------------CCCCCccchhhhHHHHHHHHHHHHHHC-CCCcEEEEEeCCCc-cCCCCCCCccchH
Q 024839          150 ------------------------GGSGPHAYTISKHGLLGLVRSAASELG-KHGIRVNCVSPFGV-ATPFSAGTINDVE  203 (262)
Q Consensus       150 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pG~v-~t~~~~~~~~~~~  203 (262)
                                              +.....+|+.||.+...+++.+++++. .+||++++++||+| .|++.+.......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  241 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ  241 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH
Confidence                                    012346899999999999999999995 46999999999999 5887654322111


Q ss_pred             hHHHhh-hcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          204 GFVCKV-ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       204 ~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      ...... ........++++.++.+++++.++....+|.++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        242 KLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            111111 1112334688888888888886664446788776

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=235.75  Aligned_cols=224  Identities=29%  Similarity=0.393  Sum_probs=188.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++++|||||+++||++++++|+++|++|++++|+.+..++..+.+.  ..++.++.+|++++++++++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999877666655543  24688899999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCC-CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           86 IMYSNAGVAGPVGTILDL-DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      ++|||+|.. ....+.+. +.+++++.+++|+.+++.+++.+.++|.++  .+++|++||..+..+.+....|+.+|+++
T Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGIT-MWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcc-cccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            999999976 44566777 899999999999999999999999998754  48999999999888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +.+++.++.++++++++++++.||++.|++....................++++|+|+++.+.++++...
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~  227 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARRK  227 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCCC
Confidence            9999999999999999999999999999986543221111111111112367899999999999997543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=5.7e-34  Score=233.43  Aligned_cols=190  Identities=22%  Similarity=0.312  Sum_probs=177.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--   82 (262)
                      +..+|.|+|||+.+|+|+.+|++|.++|++|+....+++..+.+..+..+.+...+++|++++++++++.+.+++..+  
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            356899999999999999999999999999999887777777777666467888999999999999999999998864  


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      .+..||||||++...++.+..+.+++.+++++|++|++.++++++|+++++  +||||++||..+..+.|...+|++||.
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~~~p~~g~Y~~SK~  183 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRVALPALGPYCVSKF  183 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCccCcccccchhhHH
Confidence            599999999998888999999999999999999999999999999999876  599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA  196 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~  196 (262)
                      |++.|+.++.+|+.++||.|..|.||.+.|++..
T Consensus       184 aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  184 AVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999876

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=231.85  Aligned_cols=213  Identities=22%  Similarity=0.271  Sum_probs=186.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+.    ..++.++++|+++++++.++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999887766655442    347889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-CccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-PHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK~  162 (262)
                      +|++|||||+. ...++.+.+.+.+.+.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+. ...|+.||+
T Consensus        82 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIG-KGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcC-CCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHHH
Confidence            99999999986 445667778899999999999999999999999998776 789999999988877764 688999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +++.+++.++.++...||++++++||+++|++......            .....++++.++.++..+....
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~------------~~~~~~~~~~a~~i~~~~~~~~  219 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS------------TPFMVDTETGVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc------------CCccCCHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999998654321            1235789999999999887543

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=234.95  Aligned_cols=219  Identities=22%  Similarity=0.254  Sum_probs=183.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...+    ..+.++.+|++++++++++++.+.+.++++|++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999999876655432    2467889999999999999999999999999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||||.. ..+++.+.+.+++.+.+++|+.+++.+++.++|.|.+.  .++||++||..+..+.+....|+++|++++.|+
T Consensus        78 ~~ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  154 (274)
T PRK05693         78 NNAGYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS  154 (274)
T ss_pred             ECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence            999975 45677888999999999999999999999999999753  589999999999888888899999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----------HhHH----HhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----------EGFV----CKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----------~~~~----~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++++.|++++||+|++++||+++|++........          ....    ...........+|+++++.++..+....
T Consensus       155 ~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        155 DALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             HHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999865431110          0000    0000011234689999999999886543

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-33  Score=232.89  Aligned_cols=235  Identities=25%  Similarity=0.322  Sum_probs=193.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .|++|||||+++||++++++|+++|++|+++.|+.+..+.+.+... .++.++++|++|.++++++++++.+.++++|+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG-DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999887776655544 468899999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      |||||.. ...+..+.+.+++.+.+++|+.+++.++++++|+|++++ .++||++||..+..+.+....|++||++++.|
T Consensus        81 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  158 (276)
T PRK06482         81 VSNAGYG-LFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGF  158 (276)
T ss_pred             EECCCCC-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHHHHHHHH
Confidence            9999986 446777888999999999999999999999999998766 68999999999888888889999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc----------hHhHHHhhh-cccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTIND----------VEGFVCKVA-NLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +++++.+++++||+++.++||.+.|++.......          ......... .+.....+++++++++...+....  
T Consensus       159 ~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~--  236 (276)
T PRK06482        159 VEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTP--  236 (276)
T ss_pred             HHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCC--
Confidence            9999999999999999999999998875433110          001111111 111224689999999999986442  


Q ss_pred             eeceEEeeCCCc
Q 024839          237 VSGHDLVVDGGF  248 (262)
Q Consensus       237 i~G~~i~~dgG~  248 (262)
                       .+..+++..|.
T Consensus       237 -~~~~~~~g~~~  247 (276)
T PRK06482        237 -APRRLTLGSDA  247 (276)
T ss_pred             -CCeEEecChHH
Confidence             24556666653

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=226.52  Aligned_cols=197  Identities=23%  Similarity=0.234  Sum_probs=171.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||++|||++++++|+++ ++|++++|+..               .++||+++++++++++++    .+++|++||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~----~~~id~lv~   61 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEK----VGKVDAVVS   61 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHh----cCCCCEEEE
Confidence            6999999999999999999999 99999988743               378999999999988765    478999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR  169 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  169 (262)
                      |||.. ...++.+.+.++|.+.+++|+.+++.+++.+.|+|++   .++|+++||..+..+.+....|+++|+++++|++
T Consensus        62 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  137 (199)
T PRK07578         62 AAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVK  137 (199)
T ss_pred             CCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHH
Confidence            99975 4567888999999999999999999999999999963   4799999999998888889999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       170 ~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +++.|+ ++||++++|+||+++|++.....          ..+.....+|+|+++.+.++++.   .++|+.|.+
T Consensus       138 ~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~----------~~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        138 AAALEL-PRGIRINVVSPTVLTESLEKYGP----------FFPGFEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHHc-cCCeEEEEEcCCcccCchhhhhh----------cCCCCCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            999999 88999999999999998632110          01224567999999999999963   589998875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-34  Score=224.18  Aligned_cols=186  Identities=26%  Similarity=0.299  Sum_probs=170.1

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH-HhCCc
Q 024839            7 QGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE-KYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s-~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~~~   84 (262)
                      ..|.+||||++ ||||.++++.|+++|+.|+.++|+.+....+....   .+...++|+++++++..+..++++ .+|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~---gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF---GLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh---CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            46889999987 79999999999999999999999999887776543   488999999999999999999999 67899


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+++||||.. ...+..+.+.++.++.|++|++|+..+++++...+.+.  +|+||++.|..+..|++..+.|++||+|+
T Consensus        83 d~L~NNAG~~-C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   83 DLLYNNAGQS-CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             EEEEcCCCCC-cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccchhhhhhHHHHHH
Confidence            9999999986 66788999999999999999999999999988555544  69999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT  198 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~  198 (262)
                      ..+++.|..|++++||+|..+.||.|.|.+....
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            9999999999999999999999999999876653

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=4.6e-33  Score=217.43  Aligned_cols=223  Identities=24%  Similarity=0.267  Sum_probs=184.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-CCeEEEe-eCCchhHHHHHhh--hCCCceEEEEecCCCHHHHHHHHHHHHHHh--
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEH-GAFVIIA-DIQDELGNQVVSS--IGPEKASYRHCDVRDEKQVEETVAYAIEKY--   81 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~-~r~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--   81 (262)
                      .|.++||||.+|||..++++|.+. |-++++. .|+.+...+..+.  ..+.+++.+++|+++.++++++++++.+-.  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            466999999999999999999875 5666555 4546653322222  245799999999999999999999999984  


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----------CCcEEEEecCCCccCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----------IRGSIICTTSTASTVGG  151 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----------~~~~ii~isS~~~~~~~  151 (262)
                      ..+|++|||||+........+.+++.|.+.+++|..+++++.|+++|++++..          .+..||++||.++-.+.
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            47999999999987767777888999999999999999999999999998753          13489999998765432


Q ss_pred             ---CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHH
Q 024839          152 ---SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       152 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                         ..+.+|.+||+|+++|+|+++.|+++.+|-|..+|||+|.|+|...                ....++||.+..++.
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~----------------~a~ltveeSts~l~~  226 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK----------------KAALTVEESTSKLLA  226 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC----------------CcccchhhhHHHHHH
Confidence               3567999999999999999999999999999999999999999762                234578888887777


Q ss_pred             HcCCCCCceeceEEeeCC
Q 024839          229 LASDESAYVSGHDLVVDG  246 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dg  246 (262)
                      ....-...-+|..++.||
T Consensus       227 ~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  227 SINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHhcCcccCcceEccCC
Confidence            776666667899998886

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=224.91  Aligned_cols=225  Identities=29%  Similarity=0.380  Sum_probs=192.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+.+++++||||+++||++++++|+++|++|++++|+++..++..+.+.. .++.++++|+.+++++.++++++.+.+++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999998877776666643 46889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+|||++|.. ...++.+.+.+++.+.+++|+.+++.+++++++.+. ++ .+++|++||..+..+......|+.+|++
T Consensus        83 ~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a  159 (237)
T PRK07326         83 LDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RG-GGYIINISSLAGTNFFAGGAAYNASKFG  159 (237)
T ss_pred             CCEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HC-CeEEEEECChhhccCCCCCchHHHHHHH
Confidence            99999999976 446777889999999999999999999999999983 33 5899999999888887788899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +.++++.++.+++..|+++++++||++.|++........          .....+++|+++.+.+++..+...+.+++.
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~----------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~  228 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK----------DAWKIQPEDIAQLVLDLLKMPPRTLPSKIE  228 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh----------hhccCCHHHHHHHHHHHHhCCccccccceE
Confidence            999999999999999999999999999998754322110          011368999999999999888665555543

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=227.55  Aligned_cols=211  Identities=23%  Similarity=0.242  Sum_probs=182.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+.+.   ..++.++++|++++++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            689999999999999999999999999999999877666555432   24788999999999999999988755   479


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||+|... ...+.+.+.+++.+.+++|+.+++.+++.+.|+|.+++ .++++++||..+..+.+....|+++|++++
T Consensus        79 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         79 IVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             EEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            9999999763 35667888999999999999999999999999998876 789999999998888888889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +++++++.++++.||++++|+||+++|++.....           .+.....+|+++++.+..+++....
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~~~~  215 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-----------LPGPLTAQPEEVAKDIFRAIEKGKD  215 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC-----------CCccccCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999998754321           1223467999999999999986543

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-33  Score=229.14  Aligned_cols=220  Identities=21%  Similarity=0.265  Sum_probs=179.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHH-HHHHh---CCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAY-AIEKY---GSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~---~~~d   85 (262)
                      ++|||||++|||++++++|+++|++|++++|+.+..  ..+. ...++.++++|+++++++++++++ +.+.+   +++|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            699999999999999999999999999999886532  1122 224688999999999999998876 55554   3799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||+|......++.+.+.++|++.+++|+.+++.+++.+.+.|.+++ .++||++||..+..+.+.+..|+++|++++
T Consensus        80 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (243)
T PRK07023         80 LLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATKAALD  158 (243)
T ss_pred             EEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHHHHHH
Confidence            9999999865556777889999999999999999999999999998765 789999999999988888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cc-hH-hHHHhhhcccCCCCCHHHHHH-HHHHHcCCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---ND-VE-GFVCKVANLKGIVLKAKHVAE-AALFLASDES  234 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~-~~-~~~~~~~~~~~~~~~~~~va~-~~~~l~~~~~  234 (262)
                      ++++.++.+ .+.||+++.|+||+++|++.....   .+ .. ........+.++..+|+|+|+ .+.+|+++..
T Consensus       159 ~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        159 HHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             HHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcccc
Confidence            999999999 788999999999999998743210   00 00 001112235578899999999 5667776654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9e-33  Score=233.53  Aligned_cols=231  Identities=27%  Similarity=0.278  Sum_probs=188.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ..++.+++++|||+++|||+++|++|+.+|++|++.+|+.++.+++.+.+.    ..++.+++||+++.+++.++++++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988888877774    3578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--------
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--------  150 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--------  150 (262)
                      +.++++|++|||||+.....   ..+.|.++..|.+|..|++.+++.++|.|+.+. .+|||++||......        
T Consensus       110 ~~~~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             hcCCCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccc
Confidence            99999999999999985432   677789999999999999999999999999876 599999999775110        


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC-CCCCCccchHhHHHhhhcccCCCCCHHHHHH
Q 024839          151 -----GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                           .....+|+.||.++..+++.|++.+.. ||.+++++||.+.|+ +.+ ..............  ....++++-|+
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~--~~~ks~~~ga~  261 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSW--PLTKSPEQGAA  261 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-chHHHHHHHHHHHH--HhccCHHHHhh
Confidence                 112235999999999999999999988 999999999999999 554 21111112222111  22248999999


Q ss_pred             HHHHHcCCC-CCceeceE
Q 024839          225 AALFLASDE-SAYVSGHD  241 (262)
Q Consensus       225 ~~~~l~~~~-~~~i~G~~  241 (262)
                      ..++++..+ -...+|..
T Consensus       262 t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  262 TTCYAALSPELEGVSGKY  279 (314)
T ss_pred             heehhccCccccCccccc
Confidence            999988655 33556665

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=256.05  Aligned_cols=218  Identities=28%  Similarity=0.310  Sum_probs=188.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.  ..++.++++|+++.++++++++++.++++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5779999999999999999999999999999999999888777766553  24688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCC--CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDL--DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++|++|||||... ...+.+.  ..+++.+++++|+.+++.+++.++|.|++++ .++||++||..+..+.+..+.|+++
T Consensus       448 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        448 HVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             CCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHHHH
Confidence            9999999999752 2333222  2588999999999999999999999998876 7899999999998888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++++|+++++.|++++||+|++|+||+++|++.......          ......+|+++|+.++..+.+..
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~----------~~~~~~~~~~~a~~i~~~~~~~~  589 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY----------NNVPTISPEEAADMVVRAIVEKP  589 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc----------cCCCCCCHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999986533110          11235799999999999875543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=3.7e-33  Score=228.56  Aligned_cols=209  Identities=23%  Similarity=0.242  Sum_probs=181.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHHhC-
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEKYG-   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   82 (262)
                      .|+|++||||+.|||++.|++||++|.+|++++|++++++++.+++.+   .+++++.+|.++.++   ..+.+++... 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAG  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcC
Confidence            469999999999999999999999999999999999999999999864   478899999998776   2333444333 


Q ss_pred             -CcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           83 -SLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        83 -~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       .+-+||||+|... .+..+.+.+.+++++++++|+.+...+++.++|.|.+++ +|.|++++|.++..|.|.++.|+++
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ysas  203 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYSAS  203 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHHHH
Confidence             4668999999875 356777888889999999999999999999999999988 9999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+.++.|+++|+.|++.+||.|.++.|+.|.|+|......            .....+|+..+...+.-..
T Consensus       204 K~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~------------sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  204 KAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP------------SLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCC------------CCcCcCHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999765532            1234477877777777664

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=220.98  Aligned_cols=206  Identities=19%  Similarity=0.184  Sum_probs=174.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++++||||++|||++++++|+++|++|++++|+.+..+++.+..  .++.++++|++++++++++++++..   .+|++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS--ANIFTLAFDVTDHPGTKAALSQLPF---IPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc--CCCeEEEeeCCCHHHHHHHHHhccc---CCCEEE
Confidence            68999999999999999999999999999999987766655432  3578899999999999999887642   489999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||||... ..+..+.+.++|++++++|+.+++.+++.+.|.|.+   .+++|++||..+..+.+....|+++|+++++|+
T Consensus        77 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  152 (240)
T PRK06101         77 FNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALPRAEAYGASKAAVAYFA  152 (240)
T ss_pred             EcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCCCCchhhHHHHHHHHHH
Confidence            9998642 234446788999999999999999999999999853   468999999999998888999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +.++.|+.++||++++++||+++|++......           ......+|+++++.+...+....
T Consensus       153 ~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~-----------~~~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        153 RTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF-----------AMPMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC-----------CCCcccCHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999998653211           11234699999999998886653

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-33  Score=228.27  Aligned_cols=203  Identities=29%  Similarity=0.354  Sum_probs=167.5

Q ss_pred             HHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCC
Q 024839           24 TAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDL  103 (262)
Q Consensus        24 ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~  103 (262)
                      +|++|+++|++|++++|+.++.+         ...++++|+++.++++++++++.   +++|+||||||....       
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~---------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT---------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh---------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-------
Confidence            47899999999999999876542         12468999999999999988774   689999999997521       


Q ss_pred             CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC---------------------------CCCCCcc
Q 024839          104 DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV---------------------------GGSGPHA  156 (262)
Q Consensus       104 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~---------------------------~~~~~~~  156 (262)
                        +++.+++++|+.+++.+++.++|+|.+   .|+||++||.++..                           +.+...+
T Consensus        62 --~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (241)
T PRK12428         62 --APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATG  136 (241)
T ss_pred             --CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccH
Confidence              247899999999999999999999853   48999999998763                           4556789


Q ss_pred             chhhhHHHHHHHHHHH-HHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          157 YTISKHGLLGLVRSAA-SELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la-~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |++||+|+++|+++++ .+++++||+||+|+||++.|++........ .........|.+++.+|+|+++.+.||+++.+
T Consensus       137 Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhh
Confidence            9999999999999999 999999999999999999999865432211 11111223466788899999999999999888


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .+++|+.+.+|||+..
T Consensus       217 ~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        217 RWINGVNLPVDGGLAA  232 (241)
T ss_pred             cCccCcEEEecCchHH
Confidence            9999999999999753

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-31  Score=216.78  Aligned_cols=208  Identities=25%  Similarity=0.262  Sum_probs=180.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++.+|+++||||+++||+++|++|+++|+ +|++++|+.++.++     ...++.++.+|++++++++++++.    .+
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~----~~   72 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEA----AS   72 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHh----cC
Confidence            446799999999999999999999999999 99999998776543     224688999999999999887764    46


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++||++|......++.+.+.+++.+.+++|+.+++.+.+++.+.+++++ .+++|++||..+..+.+....|+++|+
T Consensus        73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~  151 (238)
T PRK08264         73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKA  151 (238)
T ss_pred             CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHHHH
Confidence            7999999999854566778889999999999999999999999999998776 789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +++.+++.++.++.++|++++++.||.++|++.....              ....+++++++.++..+.....
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~--------------~~~~~~~~~a~~~~~~~~~~~~  210 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD--------------APKASPADVARQILDALEAGDE  210 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC--------------cCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999998754321              1257889999999988865543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=213.17  Aligned_cols=215  Identities=20%  Similarity=0.259  Sum_probs=172.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++. .+  .++.+..+|++|+++++++++.+.+  +++|++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL--PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc--cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEE
Confidence            68999999999999999999999999999999987655432 22  3577889999999999999998854  4799999


Q ss_pred             eCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---CCCccchhhhHHH
Q 024839           89 SNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---SGPHAYTISKHGL  164 (262)
Q Consensus        89 ~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~~~~~Y~~sK~a~  164 (262)
                      ||+|.... ..++.+.+.+++.+.+++|+.+++.+++.+++.+.+.  .+.++++||..+..+.   ..+..|+++|+++
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            99998632 2456778899999999999999999999999998643  4799999997765432   3567899999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE-Ee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD-LV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~-i~  243 (262)
                      +.|++.++.+++++||++++|+||+++|++....                ...++++.++.++.++.... ...|.. +.
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  217 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN----------------APLDVETSVKGLVEQIEAAS-GKGGHRFID  217 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC----------------CCCCHHHHHHHHHHHHHhCC-ccCCCceeC
Confidence            9999999999999999999999999999986422                12466777777777765443 223333 44


Q ss_pred             eCCC
Q 024839          244 VDGG  247 (262)
Q Consensus       244 ~dgG  247 (262)
                      ++|+
T Consensus       218 ~~~~  221 (225)
T PRK08177        218 YQGE  221 (225)
T ss_pred             cCCc
Confidence            4544

>PRK08017 oxidoreductase; Provisional

Probab=99.98  E-value=3.4e-30  Score=214.51  Aligned_cols=223  Identities=22%  Similarity=0.226  Sum_probs=184.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d~l   87 (262)
                      |++|||||+++||.++++.|+++|++|++++|+.++.+.+.+    ..+..+++|+++.+++.++++.+.+.. +++|.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i   78 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYGL   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            789999999999999999999999999999999877655432    246789999999999999999887754 679999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      |||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+....|+++|++++.+
T Consensus        79 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         79 FNNAGFG-VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EECCCCC-CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            9999975 446777889999999999999999999999999998776 68999999999888888899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++++.++.++|+++++++||++.|++......... ..........+..++|+|+++.+..++++....+
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~  227 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKL  227 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCc
Confidence            999999999999999999999999987654321110 0000000011335899999999999998765443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.98  E-value=2.9e-31  Score=206.98  Aligned_cols=161  Identities=33%  Similarity=0.541  Sum_probs=147.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC--chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ--DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      |++|||||++|||++++++|+++|. .|++++|+  .+..+++.+++.  ..+++++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 68889998  666666666553  368899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||+|... .+++.+++.++|.+++++|+.+++.+.+.++|    ++ .++||++||..+..+.+.+.+|+++|+|
T Consensus        81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhccCCCCChhHHHHHHH
Confidence            999999999985 78889999999999999999999999999999    33 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 024839          164 LLGLVRSAASEL  175 (262)
Q Consensus       164 ~~~~~~~la~e~  175 (262)
                      +++|+++++.|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7e-30  Score=212.73  Aligned_cols=217  Identities=23%  Similarity=0.292  Sum_probs=176.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+...  ..++.++++|+++++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999998776655544332  1367889999999998877654      3799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||.. ...++.+.+.+++++.+++|+.+++.+++.+++.+.+++ .++||++||..+..+.+....|+++|++++
T Consensus        76 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIG-EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            999999986 456788899999999999999999999999999998877 689999999988888788889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-------HHH--hhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-------FVC--KVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      .+++.++.++.+.||++++|+||++.|++..........       ...  ....+ ....+++++++.+..++..+
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP-LEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc-ccCCCHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999875432211110       000  11112 23468999999888877543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.8e-30  Score=210.95  Aligned_cols=200  Identities=20%  Similarity=0.185  Sum_probs=154.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      -.++++|+++||||++|||+++|++|+++|++|++++|+.....+.  ... ....++.+|+++.+++++       .++
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~-~~~~~~~~D~~~~~~~~~-------~~~   78 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDE-SPNEWIKWECGKEESLDK-------QLA   78 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hcc-CCCeEEEeeCCCHHHHHH-------hcC
Confidence            3457899999999999999999999999999999999886322111  111 223678999999987754       346


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccchhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++|++|||||...    ..+.+.++|.+++++|+.+++.+++.++|.|++++  ..+.+++.+|..+..+ +..+.|++|
T Consensus        79 ~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aS  153 (245)
T PRK12367         79 SLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEIS  153 (245)
T ss_pred             CCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHH
Confidence            8999999999742    23468899999999999999999999999997631  1234545556555544 356789999


Q ss_pred             hHHHHHHH---HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLV---RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~---~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+|+..+.   +.++.|+...|++++.++||+++|++..                 ....+|+++|+.+++.+....
T Consensus       154 Kaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        154 KRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------------cCCCCHHHHHHHHHHHHhcCC
Confidence            99986543   5555566788999999999999998621                 124699999999999997654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.7e-30  Score=209.54  Aligned_cols=222  Identities=27%  Similarity=0.269  Sum_probs=193.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +.++|||||+|||+++|..+..+|++|.++.|+.+++.++.++++-    ..+.+..+|+.|.+++..+++++++..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            6899999999999999999999999999999999999998888753    236689999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |.+|+|||.. ..+.+.+.+.++++..+++|+.+.++++++.++.|+++...|+|+.++|..+..+..++++|+++|.|+
T Consensus       114 d~l~~cAG~~-v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVA-VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCcc-cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            9999999976 678999999999999999999999999999999998865467999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      .+|+..+++|+.++||+|..+.|+.+.||.+.......+..... ..-.....++|+.|..++.-+..
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~i-i~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKI-IEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheee-ecCCCCCcCHHHHHHHHHhHHhh
Confidence            99999999999999999999999999999654432111111111 11224467999999998876643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-29  Score=204.58  Aligned_cols=214  Identities=21%  Similarity=0.212  Sum_probs=177.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++..    ..+.++++|+++.++++++++++..  +++|++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDG--EALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEE
Confidence            689999999999999999999999999999999776655432    2356899999999999998877642  4799999


Q ss_pred             eCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC---ccchhhhHHH
Q 024839           89 SNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP---HAYTISKHGL  164 (262)
Q Consensus        89 ~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~---~~Y~~sK~a~  164 (262)
                      ||+|..+. .....+.+.++|++.+++|+.+++.+++++.|.|.+.  .+++++++|..+..+....   ..|+++|+++
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            99997632 2455677899999999999999999999999988653  5899999998776653322   3599999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.+++.++.++  .++++++|+||+++|++.+.                ....++++.++.+..++.......+|+.+.+
T Consensus       154 ~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (222)
T PRK06953        154 NDALRAASLQA--RHATCIALHPGWVRTDMGGA----------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQY  215 (222)
T ss_pred             HHHHHHHhhhc--cCcEEEEECCCeeecCCCCC----------------CCCCCHHHHHHHHHHHHHhcCcccCceEEee
Confidence            99999999886  47999999999999998542                1235889999999998777777788999999


Q ss_pred             CCCc
Q 024839          245 DGGF  248 (262)
Q Consensus       245 dgG~  248 (262)
                      |++.
T Consensus       216 ~~~~  219 (222)
T PRK06953        216 DGVE  219 (222)
T ss_pred             CCcC
Confidence            9763

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.2e-31  Score=206.53  Aligned_cols=234  Identities=21%  Similarity=0.155  Sum_probs=186.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEE--EeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVI--IADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~--~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+|.+|+||+|.|||..++..+.+++....  +..|.....+.+.-... ........|+....-+.++++..++++++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            467899999999999999999988876544  34444333222221122 233445567778888888899999999999


Q ss_pred             CEEEeCCcCCCCCCCcC--CCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           85 DIMYSNAGVAGPVGTIL--DLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      |++|||||..++.....  ..+.++|++.|+.|+++.+.+.+.++|.+++++.++.++++||.++..|+..|+.|+.+|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            99999999987766555  6778999999999999999999999999988755799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch------HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV------EGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |.++|.+.+|.|-. +++++.++.||.++|+|.....+..      -..+.+.+ ..+++.+|...++.+.+|+.... +
T Consensus       164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~-~~~~ll~~~~~a~~l~~L~e~~~-f  240 (253)
T KOG1204|consen  164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK-ESGQLLDPQVTAKVLAKLLEKGD-F  240 (253)
T ss_pred             HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH-hcCCcCChhhHHHHHHHHHHhcC-c
Confidence            99999999999855 7999999999999999865543222      22222222 34788999999999999997654 8


Q ss_pred             eeceEEee
Q 024839          237 VSGHDLVV  244 (262)
Q Consensus       237 i~G~~i~~  244 (262)
                      .+|+++..
T Consensus       241 ~sG~~vdy  248 (253)
T KOG1204|consen  241 VSGQHVDY  248 (253)
T ss_pred             cccccccc
Confidence            89998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=200.62  Aligned_cols=220  Identities=23%  Similarity=0.290  Sum_probs=180.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .|++|||||+++||++++++|+++ ++|++++|+.+..+++.+..  ..+.++.+|++++++++++++.+    +++|+|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~----~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQL----GRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhc----CCCCEE
Confidence            478999999999999999999999 99999999987766554443  24778999999999998887653    479999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ||++|.. ...++.+.+.++|.+++++|+.+++.+.+.+++.++++  .+++|++||..+..+.+....|+.+|++++.+
T Consensus        76 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         76 VHNAGVA-DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            9999986 34566778899999999999999999999999998765  47999999999888888889999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ++.++.++... ++++++.||++++++........     ....+..++++++|+++.++++++...   .|.+.+++.
T Consensus       153 ~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~-----~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~~~  222 (227)
T PRK08219        153 ADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE-----GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEVVV  222 (227)
T ss_pred             HHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh-----ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceEEE
Confidence            99999998776 99999999999887644322111     011133567899999999999997643   355555543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.96  E-value=1.4e-26  Score=202.65  Aligned_cols=198  Identities=19%  Similarity=0.151  Sum_probs=153.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+... ..+..+.+|++|++++.+.+       +++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~-~~v~~v~~Dvsd~~~v~~~l-------~~I  246 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGED-LPVKTLHWQVGQEAALAELL-------EKV  246 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC-CCeEEEEeeCCCHHHHHHHh-------CCC
Confidence            4679999999999999999999999999999999998776544332211 34678899999998876543       589


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC---CcEEEEecCCCccCCCCCCccchhhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI---RGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|||||....    .+.+.+++++++++|+.+++.++++++|.|++++.   ++.+|++|+ +. ...+..+.|++||
T Consensus       247 DiLInnAGi~~~----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASK  320 (406)
T PRK07424        247 DILIINHGINVH----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSK  320 (406)
T ss_pred             CEEEECCCcCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHH
Confidence            999999997522    35788999999999999999999999999987541   234566654 33 3334456899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +|+..++. +.++.  .++.+..+.||++.|++.                + ...++||++|+.+++++..+...
T Consensus       321 aAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~----------------~-~~~~spe~vA~~il~~i~~~~~~  375 (406)
T PRK07424        321 RALGDLVT-LRRLD--APCVVRKLILGPFKSNLN----------------P-IGVMSADWVAKQILKLAKRDFRN  375 (406)
T ss_pred             HHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCC----------------c-CCCCCHHHHHHHHHHHHHCCCCE
Confidence            99999984 44442  467788889999988762                1 12469999999999999877653

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=2.4e-25  Score=227.26  Aligned_cols=181  Identities=18%  Similarity=0.131  Sum_probs=155.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCch------------------------------------------
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDE------------------------------------------   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~------------------------------------------   43 (262)
                      +++++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHh
Q 024839           44 -----LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL  116 (262)
Q Consensus        44 -----~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv  116 (262)
                           ...+..+.+.  ..++.++.||++|.++++++++++.+. +++|+||||||+. ..+.+.+.+.++|.+++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHH
Confidence                 0111112221  146889999999999999999999887 6899999999987 457888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC
Q 024839          117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA  196 (262)
Q Consensus       117 ~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~  196 (262)
                      .|.+.+++++.+.+     .++||++||..+..+.++...|+++|++++.+++.++.++.  +++|++|.||+++|+|..
T Consensus      2154 ~G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN-----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhC-----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999988876542     46899999999999999999999999999999999999974  489999999999998863

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.93  E-value=3.8e-24  Score=184.19  Aligned_cols=217  Identities=15%  Similarity=0.107  Sum_probs=159.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+|+||++++++|+++|  ++|++++|+......+.+.+...++.++.+|++|++++.++++       +
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            358999999999999999999999986  7899888876654444444433468899999999999888775       5


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+|||+||...  .+..+.+   ..+.+++|+.++..+++++.+    .+ .++||++||..+..|   ..+|+++|++
T Consensus        75 iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~-~~~iV~~SS~~~~~p---~~~Y~~sK~~  141 (324)
T TIGR03589        75 VDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAID----NG-VKRVVALSTDKAANP---INLYGATKLA  141 (324)
T ss_pred             CCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeCCCCCCC---CCHHHHHHHH
Confidence            899999999642  1222233   346899999999999998775    23 579999999765543   4679999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh--cc------cCCCCCHHHHHHHHHHHcCCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA--NL------KGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .+.+++.++.+++.+|+++++++||++.+|-.. ..+..........  .+      .+.++.++|++++++.++.... 
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~-  219 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERML-  219 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCC-
Confidence            999999998888889999999999999987421 1111111111000  11      1236899999999999986432 


Q ss_pred             ceeceEEeeCCC
Q 024839          236 YVSGHDLVVDGG  247 (262)
Q Consensus       236 ~i~G~~i~~dgG  247 (262)
                        .|+.+ +..|
T Consensus       220 --~~~~~-~~~~  228 (324)
T TIGR03589       220 --GGEIF-VPKI  228 (324)
T ss_pred             --CCCEE-ccCC
Confidence              35655 4434

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=8e-24  Score=189.76  Aligned_cols=218  Identities=20%  Similarity=0.212  Sum_probs=161.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-----------CCceEEEEecCCCHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----------PEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      ..||++|||||+|+||++++++|+++|++|+++.|+.++.+.+.+.+.           ..++.++.+|+.+.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            368999999999999999999999999999999999887766554331           135789999999998876543


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSG  153 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~  153 (262)
                             +++|+||||+|....       ...++...+++|+.+...+++++..    .+ .++||++||..+. .+.+.
T Consensus       158 -------ggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~----ag-VgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        158 -------GNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATV----AK-VNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             -------cCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHH----hC-CCEEEEEccchhcccCccc
Confidence                   579999999986421       2235778899999999888887654    23 5799999998764 22222


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                       ..|. +|.++..+.+.+..++...||+++.|+||++++++........... .....+.++.++.+|||+.++|+++++
T Consensus       219 -~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~-~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        219 -AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTL-SEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             -cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceee-ccccccCCCccCHHHHHHHHHHHHcCc
Confidence             2344 7888888899999999999999999999999988643211110000 001134577889999999999999855


Q ss_pred             C-CceeceEEeeCCC
Q 024839          234 S-AYVSGHDLVVDGG  247 (262)
Q Consensus       234 ~-~~i~G~~i~~dgG  247 (262)
                      . .+  +.++.+-.|
T Consensus       296 ~as~--~kvvevi~~  308 (576)
T PLN03209        296 RLSY--CKVVEVIAE  308 (576)
T ss_pred             hhcc--ceEEEEEeC
Confidence            3 33  566665444

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=1.1e-24  Score=172.84  Aligned_cols=223  Identities=19%  Similarity=0.217  Sum_probs=176.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-----eEEEeeCCchhHHHHHhhhC------CCceEEEEecCCCHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-----FVIIADIQDELGNQVVSSIG------PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-----~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .|++||||++||||.++|++|.+...     ++++++|+-++.+++...+.      ..+++++.+|+++..++.++.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            68999999999999999999998754     46778999988887776663      25889999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCC-------------CcC-------------CCCHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVG-------------TIL-------------DLDMAQFDRTIATNLAGSVMAVKYAARVM  130 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~-------------~~~-------------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~  130 (262)
                      +.+++.++|.++.|||++...+             ++.             ..+.++++++|+.||+|++.+.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            9999999999999999752111             000             24567899999999999999999999999


Q ss_pred             HhCCCCcEEEEecCCCccCC---------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc
Q 024839          131 VANKIRGSIICTTSTASTVG---------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND  201 (262)
Q Consensus       131 ~~~~~~~~ii~isS~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~  201 (262)
                      ..++ ...+|++||..+...         ..+..+|+.||.+.+-+.-++.+.+.+.|+...+++||...|.+.....+.
T Consensus       163 ~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~  241 (341)
T KOG1478|consen  163 CHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNP  241 (341)
T ss_pred             hcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhh
Confidence            8877 679999999887532         245679999999999999999999999999999999999999887766544


Q ss_pred             hHhHHHhh--------hcccCCCCCHHHHHHHHHHHcCC
Q 024839          202 VEGFVCKV--------ANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       202 ~~~~~~~~--------~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ..-.-...        .+| .-.++|-..+.+.+|+.-.
T Consensus       242 ~~~~~~~~~fyl~rllgsp-wh~id~y~aa~A~vw~~l~  279 (341)
T KOG1478|consen  242 FTYFGMLCGFYLARLLGSP-WHNIDPYKAANAPVWVTLA  279 (341)
T ss_pred             HHHHHHHHHHHHHHHhcCc-ccccCccccccchhhhhhc
Confidence            22221111        112 1124555666666666633

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.1e-23  Score=164.95  Aligned_cols=173  Identities=19%  Similarity=0.264  Sum_probs=144.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHH---HhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQV---VSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |+++||||+++||++++++|+++|+ .|++++|+.+..+..   .+++.  ..++.++++|++++++++++++.+.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 578888875543221   12221  24677899999999999999999998899


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|.+||++|.. ...++.+.+.+++++++++|+.+++.+.+.+.+    .+ .++++++||..+..+.+....|+++|+
T Consensus        81 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHhcCCCCchhhHHHHH
Confidence            999999999976 445667889999999999999999999998732    23 589999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCcc
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVA  191 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~  191 (262)
                      +++.+++.++.    .|+++..+.||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999977654    58999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=1.2e-22  Score=174.94  Aligned_cols=219  Identities=19%  Similarity=0.181  Sum_probs=160.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---C-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---G-PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+|++|||||+|+||++++++|+++|++|+++.|+.+.........   . ..++.++.+|++++++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4899999999999999999999999999998888866543332211   1 1368889999999999888776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS----------  152 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------  152 (262)
                      ++|+|||+||....     ..+.+++.+.+++|+.+++.+++++.+.+   + .++||++||..+..+..          
T Consensus        77 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhheecCCccCCCCCccC
Confidence            68999999996421     23445678999999999999999887642   2 46999999986543210          


Q ss_pred             ------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh---hhccc----
Q 024839          153 ------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK---VANLK----  213 (262)
Q Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~---~~~~~----  213 (262)
                                  ....|+.+|.+.+.+++.++.+   +|+.++.++|+.+++|...............   ...+.    
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~  224 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTH  224 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcC
Confidence                        0246999999999999988776   4899999999999998754321111111111   11121    


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      +.++.++|++++++.++.....   +..++++|+
T Consensus       225 r~~i~v~Dva~a~~~~l~~~~~---~~~~ni~~~  255 (325)
T PLN02989        225 HRFVDVRDVALAHVKALETPSA---NGRYIIDGP  255 (325)
T ss_pred             cCeeEHHHHHHHHHHHhcCccc---CceEEEecC
Confidence            3577899999999998865432   346788654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=1.6e-22  Score=176.00  Aligned_cols=228  Identities=16%  Similarity=0.085  Sum_probs=162.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++||++|||||+|+||++++++|+++|++|++++|+.+........+. ..++.++.+|+++.+++.++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            468999999999999999999999999999999988665433322222 135778899999999999888854     68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------------CCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------------GGS  152 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~  152 (262)
                      |+|||+|+....     ..+.+++...+++|+.+++.+++++.+   ... .+++|++||...+.            +..
T Consensus        77 d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~-~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRA---IGS-VKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCC-CCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            999999985421     245566788999999999999997642   121 46899999964321            123


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCC----CCcEEEEEeCCCccCCCCCCCccchHhHHHhh----------hcccCCCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGK----HGIRVNCVSPFGVATPFSAGTINDVEGFVCKV----------ANLKGIVLK  218 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~~  218 (262)
                      +..+|+.+|.+.+.+++.++.++.+    .|++++.++|+.+++|-......-........          ....+.++.
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            3568999999999999999998855    48999999999999874211100000111000          112244678


Q ss_pred             HHHHHHHHHHHcCCCCC--ceeceEEeeCCC
Q 024839          219 AKHVAEAALFLASDESA--YVSGHDLVVDGG  247 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~--~i~G~~i~~dgG  247 (262)
                      .+|++++++.++.....  ...|+.+++..|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            89999999887753211  123578898765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=3.7e-21  Score=165.51  Aligned_cols=219  Identities=20%  Similarity=0.166  Sum_probs=155.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ..||++|||||+|+||++++++|+++|++|+++.|+.+..+...+...    ..++.++.+|++++++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999999988887654433222211    2467889999999998888876      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-CCC--------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-GGS--------  152 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~--------  152 (262)
                       ++|+|||+|+.... .     ..+...+.+++|+.+...+++++...   .+ .++||++||.++.. +.+        
T Consensus        77 -~~d~vih~A~~~~~-~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~-v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         77 -GCDAVFHTASPVFF-T-----VKDPQTELIDPALKGTINVLNTCKET---PS-VKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             -CCCEEEEeCCCcCC-C-----CCCchhhhhHHHHHHHHHHHHHHHhc---CC-ccEEEEecchhheecCCccCCCCCCc
Confidence             58999999986421 1     11234568999999999999876431   12 46999999986531 110        


Q ss_pred             -------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh----HHHhh---hcc
Q 024839          153 -------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG----FVCKV---ANL  212 (262)
Q Consensus       153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----~~~~~---~~~  212 (262)
                                   ....|+.||.+.+.+++.+..++   |+.++.++|+.+.+|...........    .....   ...
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNR  222 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCc
Confidence                         13569999999999999887763   89999999999999865432111011    11110   011


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      .+.++.++|+|++++.++.....  .| .++++|+
T Consensus       223 ~~~~v~v~Dva~a~~~al~~~~~--~~-~yni~~~  254 (322)
T PLN02986        223 FYRFVDVRDVALAHIKALETPSA--NG-RYIIDGP  254 (322)
T ss_pred             CcceeEHHHHHHHHHHHhcCccc--CC-cEEEecC
Confidence            23578999999999999875432  24 6778554

>PLN02583 cinnamoyl-CoA reductase

Probab=99.89  E-value=2.8e-21  Score=164.44  Aligned_cols=219  Identities=11%  Similarity=0.047  Sum_probs=152.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +-.+|++|||||+|+||++++++|+++|++|+++.|+.+  ......+.+.  ..++.++.+|++|.+++.+++.     
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence            345789999999999999999999999999999988533  2222233332  2367889999999988876665     


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---C-----
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---S-----  152 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~-----  152 (262)
                        ..|.++|.++...      +. ..++.+++++|+.+++.+++++.+.+   + .++||++||..+....   .     
T Consensus        78 --~~d~v~~~~~~~~------~~-~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 --GCSGLFCCFDPPS------DY-PSYDEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             --CCCEEEEeCccCC------cc-cccHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHheecccccCCCCCC
Confidence              6899998765321      11 12467899999999999999987643   2 4699999998654211   0     


Q ss_pred             ----CC----------ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCC
Q 024839          153 ----GP----------HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK  218 (262)
Q Consensus       153 ----~~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
                          .+          ..|+.||...+.++..++.+   +|+++++++|+.+.+|......................++.
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~  221 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVD  221 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEE
Confidence                01          15999999999999888765   48999999999999986432211000000000001124789


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ++|+|++.+..+.....  .|. +.+.++
T Consensus       222 V~Dva~a~~~al~~~~~--~~r-~~~~~~  247 (297)
T PLN02583        222 VNFLVDAHIRAFEDVSS--YGR-YLCFNH  247 (297)
T ss_pred             HHHHHHHHHHHhcCccc--CCc-EEEecC
Confidence            99999999999975432  354 444444

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.88  E-value=7.6e-21  Score=162.74  Aligned_cols=241  Identities=15%  Similarity=0.073  Sum_probs=166.0

Q ss_pred             CCCEEEEecCCChHHHH--HHHHHHHcCCeEEEeeCCchh---------------HHHHHhhhCCCceEEEEecCCCHHH
Q 024839            7 QGKVAIIMGAASGIGEA--TAKLFAEHGAFVIIADIQDEL---------------GNQVVSSIGPEKASYRHCDVRDEKQ   69 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~--ia~~l~~~g~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~D~~~~~~   69 (262)
                      -+|++||||+++|||.+  +|++| ++|++|+++++..+.               .++..+..+ ..+..++||++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-LYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-CceEEEEcCCCCHHH
Confidence            47999999999999999  89999 999998888753321               122222222 356789999999999


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCCCCC-----------------cC-----------------CCCHHHHHHHHHHH
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGPVGT-----------------IL-----------------DLDMAQFDRTIATN  115 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n  115 (262)
                      ++++++++.+++|++|+||||+|.. ....                 +.                 ..+.++++..+++ 
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~-~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v-  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP-RRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV-  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC-CCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh-
Confidence            9999999999999999999999975 1111                 11                 1334455554443 


Q ss_pred             hhHH-----HHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC
Q 024839          116 LAGS-----VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF  188 (262)
Q Consensus       116 v~~~-----~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG  188 (262)
                       +|.     |.-.....+.|.  . .++++-+|...+....|.+  ..-+.+|++++.-++.|+.+|++.|||+|++.+|
T Consensus       196 -Mggedw~~Wi~al~~a~lla--~-g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g  271 (398)
T PRK13656        196 -MGGEDWELWIDALDEAGVLA--E-GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLK  271 (398)
T ss_pred             -hccchHHHHHHHHHhccccc--C-CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecC
Confidence             443     222333444442  2 5899999998888776655  4779999999999999999999999999999999


Q ss_pred             CccCCCCCCC--ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          189 GVATPFSAGT--INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       189 ~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      ++.|.-....  .+..-..+.+.+   +.-..-|.+-+.+..|..+.- |-.|..-.+|.--.++.--|+|.+
T Consensus       272 ~~~T~Ass~Ip~~~ly~~~l~kvm---k~~g~he~~ieq~~rl~~~~l-y~~~~~~~~d~~~r~r~d~~el~~  340 (398)
T PRK13656        272 AVVTQASSAIPVMPLYISLLFKVM---KEKGTHEGCIEQIYRLFSERL-YRDGAIPEVDEEGRLRLDDWELRP  340 (398)
T ss_pred             cccchhhhcCCCcHHHHHHHHHHH---HhcCCCCChHHHHHHHHHHhc-ccCCCCCCcCCcCCcccchhhcCH
Confidence            9999765544  222333334433   233345666666666664321 112333336766667777676654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.88  E-value=4.3e-21  Score=166.34  Aligned_cols=231  Identities=14%  Similarity=0.033  Sum_probs=152.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhh--CCCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSI--GPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +.++|++|||||+|+||++++++|+++|++|++++|+.+.     .+......  ...++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            5678999999999999999999999999999999887542     22211111  1135789999999999999888865


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------  150 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------  150 (262)
                           ++|+|||+|+....     ....++....+++|+.++..+++++.+...+++.-.++|++||...+..       
T Consensus        83 -----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E  152 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE  152 (340)
T ss_pred             -----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence                 59999999997532     1233455777899999999999998887543221127888887532221       


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHHCC---CCcEEEEEeCCCccCCCCCCCccchHhHHHhh--------hcccCCC
Q 024839          151 ---GSGPHAYTISKHGLLGLVRSAASELGK---HGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--------ANLKGIV  216 (262)
Q Consensus       151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~  216 (262)
                         ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+...............        ....+.+
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  232 (340)
T PLN02653        153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW  232 (340)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence               123568999999999999999888632   12333444444222110000000000000000        1122457


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +..+|++++++.++....    +..+++.+|..
T Consensus       233 i~v~D~a~a~~~~~~~~~----~~~yni~~g~~  261 (340)
T PLN02653        233 GFAGDYVEAMWLMLQQEK----PDDYVVATEES  261 (340)
T ss_pred             eeHHHHHHHHHHHHhcCC----CCcEEecCCCc
Confidence            899999999999986532    45688877754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.87  E-value=8.2e-20  Score=159.16  Aligned_cols=215  Identities=17%  Similarity=0.185  Sum_probs=152.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ....++++|||||+|+||++++++|+++|++|++++|+.+......+.+. ..++.++.+|+.+.+++.++++       
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------
Confidence            34578899999999999999999999999999999888665554444332 2468889999999988887765       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHH--HHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQF--DRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~--~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------  151 (262)
                      ++|+|||+|+...........+.+++  ..+++.|+.+...+++++.+..   . .++||++||.+.+...         
T Consensus        79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhccccccCCCCCCc
Confidence            58999999997532211122233333  4567888899999998876531   2 4689999997554210         


Q ss_pred             ----------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHH---hhhc
Q 024839          152 ----------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVC---KVAN  211 (262)
Q Consensus       152 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~---~~~~  211 (262)
                                      +...+|+.||.+.+.+++.++.++   |+.+..++|+.+.+|......+.. .....   ....
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~  231 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSK  231 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcc
Confidence                            011379999999999999888764   899999999999998654321111 11110   0000


Q ss_pred             c------------cCCCCCHHHHHHHHHHHcCC
Q 024839          212 L------------KGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       212 ~------------~~~~~~~~~va~~~~~l~~~  232 (262)
                      .            .+.++.++|++++++.++..
T Consensus       232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        232 LFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            0            12468999999999999864

>PRK06720 hypothetical protein; Provisional

Probab=99.87  E-value=9.3e-21  Score=147.58  Aligned_cols=144  Identities=22%  Similarity=0.341  Sum_probs=117.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.  ..+..++++|+++.++++++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999877766555552  245678899999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC------CCcEEEEecCCCccC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK------IRGSIICTTSTASTV  149 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~------~~~~ii~isS~~~~~  149 (262)
                      ++++|++|||||......++.+.+.++ ++  ..|+.+.++.++.+.+.|.+++      ..|++..+|+.++.+
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             cCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            999999999999875455665556555 44  6677788899999999987754      367888888876554

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=1.7e-20  Score=167.53  Aligned_cols=227  Identities=13%  Similarity=0.044  Sum_probs=157.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch---h--------------HHHHH--hhhCCCceEEEEecC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE---L--------------GNQVV--SSIGPEKASYRHCDV   64 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~---~--------------~~~~~--~~~~~~~~~~~~~D~   64 (262)
                      ..+++|++|||||+|+||++++++|+++|++|+++++...   .              .+.+.  ......++.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            3567899999999999999999999999999999864311   0              00110  011123588999999


Q ss_pred             CCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           65 RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        65 ~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      +|.+++.++++..     ++|+|||+|+...  ......+++++...+++|+.+++.+++++...    +.+.++|++||
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS  191 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGT  191 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEec
Confidence            9999998888864     6999999997642  23334556677888999999999999987653    21348999998


Q ss_pred             CCccCC------------------------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-
Q 024839          145 TASTVG------------------------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-  199 (262)
Q Consensus       145 ~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-  199 (262)
                      ...+..                        ..+...|+.||.+.+.+++.++..   +|+.+..++|+.+++|...... 
T Consensus       192 ~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~~~  268 (442)
T PLN02572        192 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETMM  268 (442)
T ss_pred             ceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCccccc
Confidence            754321                        112357999999999999888776   5899999999999998633210 


Q ss_pred             ---------------cchHhHHH----hhh-------cccCCCCCHHHHHHHHHHHcCCCCCceec--eEEeeCC
Q 024839          200 ---------------NDVEGFVC----KVA-------NLKGIVLKAKHVAEAALFLASDESAYVSG--HDLVVDG  246 (262)
Q Consensus       200 ---------------~~~~~~~~----~~~-------~~~~~~~~~~~va~~~~~l~~~~~~~i~G--~~i~~dg  246 (262)
                                     ........    ...       ...+.++.++|++++++.++....  ..|  .++++.+
T Consensus       269 ~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        269 DEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             ccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                           00000011    100       112357899999999999886432  234  4677744

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=2.4e-21  Score=153.07  Aligned_cols=171  Identities=24%  Similarity=0.344  Sum_probs=132.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCch---hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDE---LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++|||||.+|||..++++|+++|. +|++++|+..   ..++..+++.  ..++.+++||++|+++++++++++.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999985 6999999932   2233444442  368999999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      ++.|||.||.. ...++.+.+.+++...+...+.+...+.+.+.+    .+ -..+|++||+.+..+.++.+.|+++.+.
T Consensus        82 i~gVih~ag~~-~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~-l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVL-ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP-LDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT-TSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeee-cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC-CCeEEEECChhHhccCcchHhHHHHHHH
Confidence            99999999987 457888999999999999999999999887654    23 6799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCc
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGV  190 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v  190 (262)
                      ++.|++.....    |.++.+|.-|+.
T Consensus       156 lda~a~~~~~~----g~~~~sI~wg~W  178 (181)
T PF08659_consen  156 LDALARQRRSR----GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHT----TSEEEEEEE-EB
T ss_pred             HHHHHHHHHhC----CCCEEEEEcccc
Confidence            99999876543    677888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.87  E-value=2.2e-20  Score=162.77  Aligned_cols=226  Identities=15%  Similarity=0.080  Sum_probs=158.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEE-EeeCCchh--HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDEL--GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |++|||||+|+||++++++|.++|++++ ++++..+.  .....+.....++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            5799999999999999999999998754 45544321  111111111235778899999999998887752     699


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHH---hC-CCCcEEEEecCCCccC------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV---AN-KIRGSIICTTSTASTV------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~-~~~~~ii~isS~~~~~------------  149 (262)
                      +|||+||....     ..+.+++.+.+++|+.++..+++++.+.+.   .. +...++|++||...+.            
T Consensus        77 ~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~  151 (355)
T PRK10217         77 CVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET  151 (355)
T ss_pred             EEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC
Confidence            99999986522     234566789999999999999999887542   11 1135899999864321            


Q ss_pred             -CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cch-HhHHHhhh-------cccCCCCC
Q 024839          150 -GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDV-EGFVCKVA-------NLKGIVLK  218 (262)
Q Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~-~~~~~~~~-------~~~~~~~~  218 (262)
                       +..+...|+.||.+.+.+++.++.++   ++++..++|+.+.+|-.....  ... ........       ...+.++.
T Consensus       152 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  228 (355)
T PRK10217        152 TPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLY  228 (355)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence             12345689999999999999998874   789999999999988642110  000 10111110       01234789


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+++++..++...   ..|+.+++.+|...
T Consensus       229 v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        229 VEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             HHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            999999999988643   24788999888653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.87  E-value=8.1e-20  Score=158.26  Aligned_cols=209  Identities=19%  Similarity=0.181  Sum_probs=150.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH--hhhCC-CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV--SSIGP-EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+.+......  ..+.. .++.++.+|++|.+++.++++      
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            456899999999999999999999999999988888765433221  11221 357889999999988887765      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------  151 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------  151 (262)
                       ++|+|||+|+...    .  ...+.+.+.+++|+.+...+++++.+.   .+ .+++|++||.+.+...          
T Consensus        80 -~~d~vih~A~~~~----~--~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~-~~~~v~~SS~~~~g~~~~~~~~~~~~  148 (338)
T PLN00198         80 -GCDLVFHVATPVN----F--ASEDPENDMIKPAIQGVHNVLKACAKA---KS-VKRVILTSSAAAVSINKLSGTGLVMN  148 (338)
T ss_pred             -cCCEEEEeCCCCc----c--CCCChHHHHHHHHHHHHHHHHHHHHhc---CC-ccEEEEeecceeeeccCCCCCCceec
Confidence             6899999998531    1  112334567899999999999987653   12 4699999997654311          


Q ss_pred             --------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH----hHHHh-----
Q 024839          152 --------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE----GFVCK-----  208 (262)
Q Consensus       152 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----~~~~~-----  208 (262)
                                    ++..+|+.||.+.+.+++.++.+   +|+.+..++|+.+.+|-.........    .....     
T Consensus       149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PLN00198        149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLI  225 (338)
T ss_pred             cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccc
Confidence                          12457999999999999988776   58999999999999986432211100    00000     


Q ss_pred             ---hhcc----cCCCCCHHHHHHHHHHHcCCC
Q 024839          209 ---VANL----KGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       209 ---~~~~----~~~~~~~~~va~~~~~l~~~~  233 (262)
                         ...+    .+.++.++|++++++.++...
T Consensus       226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             ccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence               0001    135789999999999988654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.86  E-value=7.7e-20  Score=159.19  Aligned_cols=207  Identities=16%  Similarity=0.141  Sum_probs=150.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ..|++|||||+|+||++++++|+++|++|+++.|+.+..........    ..++.++.+|+.+.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            46899999999999999999999999999998888655444332221    1257889999999988888776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----C------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----S------  152 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----~------  152 (262)
                      .+|.|||+|+....    .  ..+.+.+.+++|+.++..+++++.+..   . .++||++||.....+.    +      
T Consensus        77 ~~d~ViH~A~~~~~----~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~-~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF----E--SKDPENEVIKPTVNGMLSIMKACAKAK---T-VRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC----C--CCCchhhhhhHHHHHHHHHHHHHHhcC---C-ceEEEEecchhhcccCCCCCCccCccc
Confidence            58999999986421    1  112346788999999999999876531   1 3589999997543210    0      


Q ss_pred             ------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHH---hhh-----c
Q 024839          153 ------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVC---KVA-----N  211 (262)
Q Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~---~~~-----~  211 (262)
                                  ...+|+.||.+.+.+++.++.+   +|++++.++|+.+++|........ ......   ...     .
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSII  223 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcC
Confidence                        1137999999999999998877   589999999999999865432111 111100   000     0


Q ss_pred             ccCCCCCHHHHHHHHHHHcCCC
Q 024839          212 LKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       212 ~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..+.++.++|++++++.++..+
T Consensus       224 ~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        224 KQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CCcceeeHHHHHHHHHHHhcCc
Confidence            1246889999999999999654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=1.4e-19  Score=151.41  Aligned_cols=221  Identities=20%  Similarity=0.170  Sum_probs=167.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH--HHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ--VVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++|+||||+|.||++++++|+++||+|..+.|+++..+.  ....+..  .+.+.+..|+.++++++++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            68899999999999999999999999999999999887544  3444543  468999999999999999998       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-CC--------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-SG--------  153 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~--------  153 (262)
                      +.|+|+|.|......     .+ +.-.++++..+.|...+++++...    +.-.++|++||.++.... +.        
T Consensus        78 gcdgVfH~Asp~~~~-----~~-~~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD-----LE-DPEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCCC-----CC-CcHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            789999999865221     11 123379999999999999887642    125799999999887643 11        


Q ss_pred             ---C----------ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh--------hhcc
Q 024839          154 ---P----------HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK--------VANL  212 (262)
Q Consensus       154 ---~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--------~~~~  212 (262)
                         |          ..|..||.-.+.-+..++.+   .|+....|.|++|.+|......+.-......        ....
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence               1          14888888888888777777   4899999999999999876643221111111        1112


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ...++..+|+|.+-+++...+..  .|++|.++....
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~  259 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS  259 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence            23368999999999999977654  499998887765

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=1.4e-19  Score=155.68  Aligned_cols=217  Identities=19%  Similarity=0.192  Sum_probs=151.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh--hC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS--IG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~--~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++|++|||||+|+||++++++|+++|++|+++.|+..........  ..  ..++.++.+|+.+++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            478999999999999999999999999999888876543222111  11  1367899999999988887776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-C-CCC--------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-V-GGS--------  152 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~-~~~--------  152 (262)
                      ++|+|||+|+....  .   .. +...+.+++|+.++..+++++...   .+ ..++|++||..+. + +.+        
T Consensus        76 ~~d~Vih~A~~~~~--~---~~-~~~~~~~~~nv~gt~~ll~a~~~~---~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH--D---VT-DPQAELIDPAVKGTLNVLRSCAKV---PS-VKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC--C---CC-ChHHHHHHHHHHHHHHHHHHHHhC---CC-CCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            68999999986421  1   11 122578899999999999987642   12 4699999997532 1 100        


Q ss_pred             ------C------CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh-------hccc
Q 024839          153 ------G------PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV-------ANLK  213 (262)
Q Consensus       153 ------~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-------~~~~  213 (262)
                            .      ...|+.+|.+.+.+++.+..+   +|+++..++|+.+++|................       ....
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNAS  222 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCC
Confidence                  0      147999999999999887766   48999999999999986433211111111110       0112


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ..++.++|++++++.++..+..  .|. +++.|
T Consensus       223 ~~~i~v~Dva~a~~~~~~~~~~--~~~-~~~~g  252 (322)
T PLN02662        223 YRWVDVRDVANAHIQAFEIPSA--SGR-YCLVE  252 (322)
T ss_pred             cCeEEHHHHHHHHHHHhcCcCc--CCc-EEEeC
Confidence            4578999999999998865422  354 45543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=3.1e-20  Score=163.59  Aligned_cols=223  Identities=16%  Similarity=0.179  Sum_probs=175.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.||++|||||+|.||+++++++++.+- ++++.+|++.+.-...+++..    .+..++.+|+.|.+.++++++..   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            5799999999999999999999999984 588899998877766666643    67889999999999999988854   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                        ++|+|+|.|+.-+.  |+-|..   ..+.+++|++|+.++++++...    + ..++|++|+-.+..|.   ..||++
T Consensus       325 --kvd~VfHAAA~KHV--Pl~E~n---P~Eai~tNV~GT~nv~~aa~~~----~-V~~~V~iSTDKAV~Pt---NvmGaT  389 (588)
T COG1086         325 --KVDIVFHAAALKHV--PLVEYN---PEEAIKTNVLGTENVAEAAIKN----G-VKKFVLISTDKAVNPT---NVMGAT  389 (588)
T ss_pred             --CCceEEEhhhhccC--cchhcC---HHHHHHHhhHhHHHHHHHHHHh----C-CCEEEEEecCcccCCc---hHhhHH
Confidence              69999999998643  433443   5788999999999999988753    3 6799999999988774   589999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH-------HhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV-------CKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |...+.++++++......+-++.+++-|.|-..--.- .+-.....       ...+.-.+.+++.+|.+++++......
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV-iPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~  468 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV-IPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA  468 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC-HHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhc
Confidence            9999999999999877667899999999997632111 11111111       111122366889999999999988654


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                         -.|+++.+|.|-.+
T Consensus       469 ---~gGeifvldMGepv  482 (588)
T COG1086         469 ---KGGEIFVLDMGEPV  482 (588)
T ss_pred             ---CCCcEEEEcCCCCe
Confidence               35999999998654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.85  E-value=6.8e-20  Score=159.07  Aligned_cols=223  Identities=13%  Similarity=0.068  Sum_probs=147.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ...+.+...   ..++.++++|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999887542     222211111   135789999999999998888864   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------  149 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------  149 (262)
                        ++|+|||+|+..+..     ...+.-...+++|+.++..+++++.+.-.+ + ..++|++||...+.           
T Consensus        78 --~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~-~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK-----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-K-SVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCcccccc-----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-c-CeeEEEeccHHhhCCCCCCCCCCCC
Confidence              689999999975321     122233567788999999999988763111 1 24789999864322           


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-c-cchH----hHHHh--------hhcccCC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-I-NDVE----GFVCK--------VANLKGI  215 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~-~~~~----~~~~~--------~~~~~~~  215 (262)
                      +..+..+|+.||.+.+.+++.++.++   |+.+....+..+.+|..... . ....    .....        .....+.
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccC
Confidence            11245689999999999999998875   44443334433333321110 0 0000    00000        0112355


Q ss_pred             CCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          216 VLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       216 ~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.++|++++++.++....    +..+++.+|...
T Consensus       226 ~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~  256 (343)
T TIGR01472       226 WGHAKDYVEAMWLMLQQDK----PDDYVIATGETH  256 (343)
T ss_pred             ceeHHHHHHHHHHHHhcCC----CccEEecCCCce
Confidence            7899999999998886432    246888777543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.6e-19  Score=155.35  Aligned_cols=213  Identities=19%  Similarity=0.207  Sum_probs=152.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH-HHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ-VVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+.... ..+.+..  .++.++.+|+.+.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            568999999999999999999999999999999987654321 1222221  357889999999998888776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----C------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----S------  152 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----~------  152 (262)
                      ++|+|||+|+.. .         +++.+.+++|+.++..+++++.+    .+ .++||++||..+.++.    +      
T Consensus        81 ~~d~Vih~A~~~-~---------~~~~~~~~~nv~gt~~ll~aa~~----~~-v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 GCDGVFHTASPV-T---------DDPEQMVEPAVNGAKFVINAAAE----AK-VKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             cCCEEEEecCCC-C---------CCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeccceeeeccCCCCCCcccCc
Confidence            589999999853 1         13567899999999999998754    23 4699999997544321    0      


Q ss_pred             -----------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhH---HHhh----hccc
Q 024839          153 -----------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGF---VCKV----ANLK  213 (262)
Q Consensus       153 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~---~~~~----~~~~  213 (262)
                                 ....|+.||.+.+.+++.++.+   +|+.+..++|+.+.+|........ ....   ....    ....
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCC
Confidence                       1246999999999999988777   489999999999999864322110 1111   0100    0112


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      +.++.++|++++++.++....  ..| .+++.+
T Consensus       223 ~~~i~V~Dva~a~~~al~~~~--~~g-~yn~~~  252 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAPS--ASG-RYLLAE  252 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCcc--cCC-cEEEec
Confidence            357799999999999886542  234 455543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.85  E-value=8.2e-20  Score=158.83  Aligned_cols=225  Identities=15%  Similarity=0.031  Sum_probs=156.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH----HHhhhC---CCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ----VVSSIG---PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .+++|++|||||+|.||.+++++|.++|++|++++|.......    ......   ..++.++.+|+.+.+++.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            3578999999999999999999999999999999886543221    111111   1357789999999888877775  


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------  151 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------  151 (262)
                           .+|+|||.|+.....     .+.++....+++|+.++..+++++..    .+ -.++|++||...+...      
T Consensus        90 -----~~d~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~  154 (348)
T PRK15181         90 -----NVDYVLHQAALGSVP-----RSLKDPIATNSANIDGFLNMLTAARD----AH-VSSFTYAASSSTYGDHPDLPKI  154 (348)
T ss_pred             -----CCCEEEECccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeechHhhCCCCCCCCC
Confidence                 589999999965321     12233456799999999999987643    23 4589999987543211      


Q ss_pred             -----CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--c----cch-HhHHHhhhc-------c
Q 024839          152 -----SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--I----NDV-EGFVCKVAN-------L  212 (262)
Q Consensus       152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~----~~~-~~~~~~~~~-------~  212 (262)
                           .+...|+.+|.+.+.+++.++.+   +|+++..++|+.+.+|.....  .    +.. .........       .
T Consensus       155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~  231 (348)
T PRK15181        155 EERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST  231 (348)
T ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc
Confidence                 13357999999999999887766   489999999999999854221  0    111 111111110       1


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      .+.++..+|++++++..+........|+++++.+|..
T Consensus       232 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        232 SRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             eEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence            1346789999999988764332224578899987754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.84  E-value=6.2e-19  Score=153.44  Aligned_cols=228  Identities=17%  Similarity=0.191  Sum_probs=154.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH----HHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG----NQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~----~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++|++|||||+|+||++++++|+++|++|++++|.....    ....+...  ..++.++.+|+.+++++.++++..  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            5689999999999999999999999999999988754322    12221111  135788999999999998887652  


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------  150 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------  150 (262)
                         ++|+|||+|+....     ..+.+++.+.+++|+.++..+++++.    +.+ .+++|++||...+..         
T Consensus        81 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~E~  147 (352)
T PLN02240         81 ---RFDAVIHFAGLKAV-----GESVAKPLLYYDNNLVGTINLLEVMA----KHG-CKKLVFSSSATVYGQPEEVPCTEE  147 (352)
T ss_pred             ---CCCEEEEccccCCc-----cccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEccHHHhCCCCCCCCCCC
Confidence               79999999986521     12335677899999999998887543    333 468999999643211         


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC--------CCccchHhHHHhh---h-------
Q 024839          151 --GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA--------GTINDVEGFVCKV---A-------  210 (262)
Q Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~--------~~~~~~~~~~~~~---~-------  210 (262)
                        ......|+.+|.+.+.+++.++.+  ..++.+..++|+.+..+...        ........+....   .       
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        148 FPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence              123568999999999999988765  24678888888777654211        0000111111100   0       


Q ss_pred             ---------cccCCCCCHHHHHHHHHHHcCCC--CCceeceEEeeCCCccc
Q 024839          211 ---------NLKGIVLKAKHVAEAALFLASDE--SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ---------~~~~~~~~~~~va~~~~~l~~~~--~~~i~G~~i~~dgG~~~  250 (262)
                               ...+.++.++|++++++.++...  .....|+.+++.+|..+
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~  276 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGT  276 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcE
Confidence                     01123578999999988777432  11234688999888654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.83  E-value=4.3e-19  Score=151.86  Aligned_cols=221  Identities=14%  Similarity=0.080  Sum_probs=153.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCch--hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +++||||+|+||.+++++|++.|  ++|++++|...  ..+...+.....++.++.+|+++++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  78888876421  1111111112236788999999999998888743     599


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC------------CCC
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG------------GSG  153 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~------------~~~  153 (262)
                      +|||+|+....     +.+.+.+...+++|+.++..+++++...+   . +.++|++||......            ...
T Consensus        76 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYW---H-EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---C-CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999986522     22345567889999999999988765432   1 348999998543221            113


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--ccch-HhHHHhhhcc-------cCCCCCHHHHH
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--INDV-EGFVCKVANL-------KGIVLKAKHVA  223 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~~-~~~~~~~~~~-------~~~~~~~~~va  223 (262)
                      ...|+.+|.+.+.+++.++.++   ++++..++|+.+.+|.....  .... .........+       ...++.++|++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC  223 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence            3479999999999999988774   79999999999998754321  1110 0011110001       12366899999


Q ss_pred             HHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          224 EAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       224 ~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++..++.+.   ..|+.+++.+|..+
T Consensus       224 ~~~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       224 RAIYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             HHHHHHHcCC---CCCceEEeCCCCce
Confidence            9999998653   34788998777543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=6.5e-19  Score=143.55  Aligned_cols=222  Identities=14%  Similarity=0.060  Sum_probs=165.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++|||||.|.||.++++.+.++.-  +|+.++...  ...+.+....++.+..+++.|+.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4699999999999999999998864  467666542  23334444444568999999999999999988854     79


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-------------CCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-------------VGG  151 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-------------~~~  151 (262)
                      |+|+|-|+-++.     +.+..+....+++|+.|++.+++++..+..    .-+++.+|.-.-+             .|.
T Consensus        76 D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~----~frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWG----KFRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhcc----cceEEEeccccccccccCCCCCcccCCCC
Confidence            999999998764     345666788899999999999999887642    2488998875422             223


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhh---------cccCCCCCHHH
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVA---------NLKGIVLKAKH  221 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~  221 (262)
                      .+.++|++||||.++|++++.+.   +|+.+....+-.-++|...... -..........         ...+..+.++|
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            46789999999999999999998   4999999999999988654331 11111111111         12244668899


Q ss_pred             HHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          222 VAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       222 va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      -++++..++....   .|++.++.||...
T Consensus       224 h~~ai~~Vl~kg~---~GE~YNIgg~~E~  249 (340)
T COG1088         224 HCRAIDLVLTKGK---IGETYNIGGGNER  249 (340)
T ss_pred             HHHHHHHHHhcCc---CCceEEeCCCccc
Confidence            9999999997643   2999999999643

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.83  E-value=9.3e-19  Score=152.40  Aligned_cols=224  Identities=16%  Similarity=0.093  Sum_probs=153.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAF-VIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|||||+|+||++++++|+++|+. |+.+++..  .......+.....++.++.+|++|.+++.+++++.     ++|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCE
Confidence            5999999999999999999999976 55555532  11222221111245778999999999998888752     7999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC----CCCcEEEEecCCCccCC------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN----KIRGSIICTTSTASTVG------------  150 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~----~~~~~ii~isS~~~~~~------------  150 (262)
                      |||+|+.....     ...+...+.+++|+.++..+++++.++|...    +...++|++||...+..            
T Consensus        77 vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (352)
T PRK10084         77 VMHLAAESHVD-----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEE  151 (352)
T ss_pred             EEECCcccCCc-----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccccc
Confidence            99999865221     1223456789999999999999998776421    11348999999643221            


Q ss_pred             ---------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--ccch-HhHHHhhh-------c
Q 024839          151 ---------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--INDV-EGFVCKVA-------N  211 (262)
Q Consensus       151 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~~-~~~~~~~~-------~  211 (262)
                               ..+...|+.+|.+.+.+++.++.++   |+.+..+.|+.+.+|.....  .... ........       .
T Consensus       152 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (352)
T PRK10084        152 LPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (352)
T ss_pred             CCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCC
Confidence                     1234689999999999999998874   77888899999988753211  1110 00000000       1


Q ss_pred             ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          212 LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       212 ~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ..+.++.++|+++++..++...   ..|+.+++.++..
T Consensus       229 ~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        229 QIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             eEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence            1234789999999999888643   2478899887754

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.81  E-value=5.9e-18  Score=140.63  Aligned_cols=202  Identities=18%  Similarity=0.142  Sum_probs=132.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   84 (262)
                      .+++++|||||+|+||++++++|+++|++|+++.|+.++.......  ..++.++++|+.+. +++.+.+   .   .++
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~~---~---~~~   86 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEAI---G---DDS   86 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHHHHh---h---cCC
Confidence            4578999999999999999999999999999999987765443221  23688999999983 3332222   0   269


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC---CCCCCccchhhh
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV---GGSGPHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~---~~~~~~~Y~~sK  161 (262)
                      |+||+++|......+.         ..+++|+.+...+++++.    +.+ .++||++||.....   +.+....|...|
T Consensus        87 d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~  152 (251)
T PLN00141         87 DAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAAMGQILNPAYIFLN  152 (251)
T ss_pred             CEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCCcccccCcchhHHH
Confidence            9999999864211111         124677888888887753    344 57999999986432   222234566656


Q ss_pred             HHHHHHH-HHHHHH-HCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          162 HGLLGLV-RSAASE-LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       162 ~a~~~~~-~~la~e-~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      .+...+. +..+.+ +...|++++.++||++.++..........     ...+....++++|+|+.+..++..+.
T Consensus       153 ~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~-----~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        153 LFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP-----EDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC-----CCccccCcccHHHHHHHHHHHhcChh
Confidence            5444332 322222 45679999999999998765332211000     00011336799999999999986543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.81  E-value=5.9e-18  Score=146.52  Aligned_cols=224  Identities=15%  Similarity=0.180  Sum_probs=150.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH---HhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|||||+|+||++++++|+++|++|++++|..+.....   .......++.++.+|+.+.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            599999999999999999999999999887653322221   1222334567889999999998887763     36999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------CCC
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------SGP  154 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~  154 (262)
                      |||+|+.... .    ...+...+.+++|+.++..+++++.    +.+ .+++|++||...+...            ...
T Consensus        77 vvh~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCccccc-c----chhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            9999987522 1    1223356788999999988887543    334 5689999997533211            235


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--------ccchHhHHHhh----h------------
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--------INDVEGFVCKV----A------------  210 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~----~------------  210 (262)
                      ..|+.+|.+.+.+++.++.+.  .++++..++|+.+.++.....        ...........    .            
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            789999999999999987663  357888888777766521100        01101111100    0            


Q ss_pred             ---cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 ---NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ---~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                         ...+.++.++|++++++.++........|+++++.+|..+
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~  267 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGS  267 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCce
Confidence               0112478999999999888754222223688999888654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.81  E-value=8.7e-20  Score=151.32  Aligned_cols=218  Identities=15%  Similarity=0.152  Sum_probs=150.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhh----CCCceE----EEEecCCCHHHHHHHHHHHHHHh
Q 024839           11 AIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSI----GPEKAS----YRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~----~~~~~~----~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ||||||+|.||++++++|++.+ ..++++++++..+-.+.+++    .+.++.    .+.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            7999999999999999999998 57999999999888887777    223343    4578999999998888754    


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                       ++|+|+|.|+.-+  -++.+..   ..+.+++|+.|+.++++++..+    + ..++|++|+--+..|   ...||+||
T Consensus        77 -~pdiVfHaAA~Kh--Vpl~E~~---p~eav~tNv~GT~nv~~aa~~~----~-v~~~v~ISTDKAv~P---tnvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKH--VPLMEDN---PFEAVKTNVLGTQNVAEAAIEH----G-VERFVFISTDKAVNP---TNVMGATK  142 (293)
T ss_dssp             -T-SEEEE--------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHT----T--SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCC--CChHHhC---HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEccccccCCC---CcHHHHHH
Confidence             8999999999764  2333433   5788999999999999988763    3 679999999988775   46899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh-------cccCCCCCHHHHHHHHHHHcCCCC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA-------NLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ...+.++.+.+......+.++.+|+-|.|...--. ..+-.......-.       .-.+.+++++|.+++++..+....
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS-Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~  221 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS-VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK  221 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS-CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc-HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC
Confidence            99999999999988777899999999999653211 1111111111111       111558899999999999885542


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                         .|+++..|.|..+
T Consensus       222 ---~geifvl~mg~~v  234 (293)
T PF02719_consen  222 ---GGEIFVLDMGEPV  234 (293)
T ss_dssp             ---TTEEEEE---TCE
T ss_pred             ---CCcEEEecCCCCc
Confidence               4899999998765

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.81  E-value=5.6e-18  Score=148.26  Aligned_cols=209  Identities=14%  Similarity=0.115  Sum_probs=143.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh--C-----CCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--G-----PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~--~-----~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+.+..  .     ..++.++.+|++|.+++.++++  
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence            467899999999999999999999999999998888766544432210  0     1247789999999999988876  


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-cC----CC-
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-TV----GG-  151 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-~~----~~-  151 (262)
                           .+|.+||.++...... ...    ......++|+.+...+++++...   .+ ..++|++||..+ .+    +. 
T Consensus       128 -----~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~~~~~~  193 (367)
T PLN02686        128 -----GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQNYPHD  193 (367)
T ss_pred             -----hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhcccccCCCC
Confidence                 4799999998653211 100    11345667888888888875431   12 458999999631 11    00 


Q ss_pred             -----------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhc--
Q 024839          152 -----------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVAN--  211 (262)
Q Consensus       152 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~--  211 (262)
                                       .....|+.||.+.+.+++.++.+   +|++++.++|+++++|........ ..........  
T Consensus       194 ~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~  270 (367)
T PLN02686        194 LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEML  270 (367)
T ss_pred             CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccC
Confidence                             01246999999999999988776   589999999999999964321111 1111110000  


Q ss_pred             --ccCCCCCHHHHHHHHHHHcCC
Q 024839          212 --LKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       212 --~~~~~~~~~~va~~~~~l~~~  232 (262)
                        -...++.++|++++++.++..
T Consensus       271 g~g~~~~v~V~Dva~A~~~al~~  293 (367)
T PLN02686        271 ADGLLATADVERLAEAHVCVYEA  293 (367)
T ss_pred             CCCCcCeEEHHHHHHHHHHHHhc
Confidence              112377899999999988863

>PLN02427 UDP-apiose/xylose synthase

Probab=99.81  E-value=2.4e-18  Score=151.74  Aligned_cols=220  Identities=15%  Similarity=0.231  Sum_probs=149.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+.++||||||+|.||++++++|.++ |++|++++|+.+....+....   ...++.++.+|+.|.+++.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            35568999999999999999999998 599999988766544332211   11368899999999988887775      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------C
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------S  152 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------~  152 (262)
                       .+|+|||+|+..... ...    ++-.+.+..|+.+...+++++..    .  ..++|++||...+...         +
T Consensus        86 -~~d~ViHlAa~~~~~-~~~----~~~~~~~~~n~~gt~~ll~aa~~----~--~~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICTPA-DYN----TRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccChh-hhh----hChHHHHHHHHHHHHHHHHHHHh----c--CCEEEEEeeeeeeCCCcCCCCCcccc
Confidence             489999999865321 111    12234456799998888876532    2  2589999996432110         0


Q ss_pred             ------------------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC---------c
Q 024839          153 ------------------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT---------I  199 (262)
Q Consensus       153 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~---------~  199 (262)
                                              ....|+.+|.+.+.+++.++..   +|+.+..++|+.+.+|.....         .
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence                                    1136999999999999877654   589999999999999853210         0


Q ss_pred             cc-hH----hHHHhhh-------cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          200 ND-VE----GFVCKVA-------NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       200 ~~-~~----~~~~~~~-------~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      .. ..    .......       ...+.++.++|++++++.++.... ...|+.+++.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            00 00    0111100       011247899999999999886432 235788998775

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.80  E-value=8.3e-18  Score=144.74  Aligned_cols=209  Identities=18%  Similarity=0.133  Sum_probs=150.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++++||||+|+||++++++|+++|++|++++|+.+.....    ....+.++.+|+.+.+++.++++       .+|+||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EGLDVEIVEGDLRDPASLRKAVA-------GCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----ccCCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            3699999999999999999999999999999986653221    22357889999999998888776       689999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC---------------C
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS---------------G  153 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~---------------~  153 (262)
                      |+|+....       ..+++.+.+++|+.+...+++++..    .+ .+++|++||.....+..               .
T Consensus        70 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~  137 (328)
T TIGR03466        70 HVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALE----AG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDM  137 (328)
T ss_pred             Eeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccc
Confidence            99985421       1223567889999999988887653    23 56999999976543210               1


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHH--hhh-----cccCCCCCHHHHHHHH
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVC--KVA-----NLKGIVLKAKHVAEAA  226 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~va~~~  226 (262)
                      ...|+.+|.+.+.+++.++.+   +|+++..++|+.+.++..............  ...     .....++.++|+++++
T Consensus       138 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  214 (328)
T TIGR03466       138 IGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGH  214 (328)
T ss_pred             cChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHH
Confidence            347999999999999988766   489999999999988753322111000000  000     0112367899999999


Q ss_pred             HHHcCCCCCceeceEEeeCC
Q 024839          227 LFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ..++...   ..|+.++++|
T Consensus       215 ~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       215 LLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHhCC---CCCceEEecC
Confidence            9888653   3578787754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.80  E-value=1.7e-17  Score=142.55  Aligned_cols=224  Identities=16%  Similarity=0.112  Sum_probs=152.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||+|+||++++++|.++|++|++++|.............. .++.++.+|+.+++++.++++.     .++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            489999999999999999999999999887654332222222211 2577889999999999888763     4799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y  157 (262)
                      |+||.....     ...++..+.+..|+.++..+++++.    +.+ .+++|++||.......           .....|
T Consensus        76 ~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAVG-----ESVQDPLKYYRNNVVNTLNLLEAMQ----QTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCcc-----hhhcCchhhhhhhHHHHHHHHHHHH----hcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999975221     1233456778899999998887643    333 4689999886533211           134679


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-------ccchHhH----HHhhhc---------------
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-------INDVEGF----VCKVAN---------------  211 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-------~~~~~~~----~~~~~~---------------  211 (262)
                      +.+|++.+.+++.++.+.  .++++..++|+.+.++.....       .......    ......               
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987652  478999999999888742211       0100110    000000               


Q ss_pred             ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 ~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ....++.++|+++++..++........|+.+++.+|..+
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence            012367899999999988854322234788998777654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.79  E-value=1.1e-17  Score=140.90  Aligned_cols=220  Identities=18%  Similarity=0.203  Sum_probs=156.6

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHH-HHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           12 IIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGN-QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        12 lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |||||+|.||++++++|.++|  ++|.+.++...... ...+..  ....++.+|++|++++.++++       ..|+||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~--~~~~~~~~Di~d~~~l~~a~~-------g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS--GVKEYIQGDITDPESLEEALE-------GVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc--cceeEEEeccccHHHHHHHhc-------CCceEE
Confidence            699999999999999999999  78988887765432 111111  223499999999999999888       689999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---C--------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---G--------------  151 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---~--------------  151 (262)
                      |.|+.....      .....++++++|+.|+-.+++++..    .+ -.++|++||..+..+   .              
T Consensus        72 H~Aa~~~~~------~~~~~~~~~~vNV~GT~nvl~aa~~----~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   72 HTAAPVPPW------GDYPPEEYYKVNVDGTRNVLEAARK----AG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EeCcccccc------CcccHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999875321      2345688999999999999987764    24 679999999987654   1              


Q ss_pred             CCCccchhhhHHHHHHHHHHHH-HHCC-CCcEEEEEeCCCccCCCCCCCccchHhHHHhh--h-c-----ccCCCCCHHH
Q 024839          152 SGPHAYTISKHGLLGLVRSAAS-ELGK-HGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--A-N-----LKGIVLKAKH  221 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~-e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--~-~-----~~~~~~~~~~  221 (262)
                      .....|+.||+..+.++..... ++.. ..++..+|+|..|.+|--....+.........  . .     -...++.+++
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHH
Confidence            1234799999999999987665 2211 25899999999999986444333222221111  0 0     1122667999


Q ss_pred             HHHHHHHHcC---CC--CCceeceEEeeCCCcccc
Q 024839          222 VAEAALFLAS---DE--SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       222 va~~~~~l~~---~~--~~~i~G~~i~~dgG~~~~  251 (262)
                      +|.+.+..+.   +.  ...+.||.+.+..|....
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            9998865432   22  345789999988886653

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.78  E-value=5.4e-17  Score=141.51  Aligned_cols=217  Identities=19%  Similarity=0.167  Sum_probs=146.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhH------HHHHhhhC------C-CceEEEEecCCCH------H
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELG------NQVVSSIG------P-EKASYRHCDVRDE------K   68 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~------~~~~~~~~------~-~~~~~~~~D~~~~------~   68 (262)
                      ++|||||+|+||++++++|+++|  ++|+++.|..+..      ++..+...      . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799998876522      11111111      0 3688999999864      2


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      ....+.       ..+|+|||||+.....        ..+.+.+++|+.++..+++.+..    .+ ..+++++||....
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~----~~-~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAAS----GR-AKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhh----CC-CceEEEEcccccc
Confidence            333322       3699999999875211        23567788999999888876543    23 4569999998765


Q ss_pred             CCC----------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH---hHHHh-
Q 024839          149 VGG----------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE---GFVCK-  208 (262)
Q Consensus       149 ~~~----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---~~~~~-  208 (262)
                      ...                .....|+.+|.+.+.+++.++.    .|++++.++||.+.++...+......   ..... 
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~  216 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC  216 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH
Confidence            331                1134799999999999876544    38999999999999863332211110   11110 


Q ss_pred             --h-hcc-----cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          209 --V-ANL-----KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       209 --~-~~~-----~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                        . ..|     ...+++++|+++++..++.......+|+.+++.++..+
T Consensus       217 ~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       217 LALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             HHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence              0 001     12267899999999999876554345889999886433

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.77  E-value=1.8e-17  Score=155.31  Aligned_cols=219  Identities=14%  Similarity=0.194  Sum_probs=151.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH-HHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ-VEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~   83 (262)
                      .++++||||||+|.||++++++|.++ |++|+.++|........   ....++.++.+|++|..+ ++++++       +
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~~~~~~~~~gDl~d~~~~l~~~l~-------~  382 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LGHPRFHFVEGDISIHSEWIEYHIK-------K  382 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cCCCceEEEeccccCcHHHHHHHhc-------C
Confidence            35789999999999999999999986 79999999876543222   222467889999998654 344333       6


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------  151 (262)
                      +|+|||.|+..... .    ..++..+.+++|+.+...+++++..    .+  .++|++||...+...            
T Consensus       383 ~D~ViHlAa~~~~~-~----~~~~~~~~~~~Nv~~t~~ll~a~~~----~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T PRK08125        383 CDVVLPLVAIATPI-E----YTRNPLRVFELDFEENLKIIRYCVK----YN--KRIIFPSTSEVYGMCTDKYFDEDTSNL  451 (660)
T ss_pred             CCEEEECccccCch-h----hccCHHHHHHhhHHHHHHHHHHHHh----cC--CeEEEEcchhhcCCCCCCCcCcccccc
Confidence            89999999975321 1    1123346788999999988887653    22  589999996433210            


Q ss_pred             ---C---CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-------cchHhHHHhh----h----
Q 024839          152 ---S---GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-------NDVEGFVCKV----A----  210 (262)
Q Consensus       152 ---~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~~~~~~~~~----~----  210 (262)
                         +   ....|+.||.+.+.+++.++.+   +|+++..++|+.+++|-.....       ..........    .    
T Consensus       452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~  528 (660)
T PRK08125        452 IVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLV  528 (660)
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEe
Confidence               0   1236999999999999988766   4899999999999988532110       0001111100    0    


Q ss_pred             ---cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          211 ---NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       211 ---~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                         ...+.++.++|++++++.++........|+.+++.+|.
T Consensus       529 g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        529 DGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence               11234789999999999988654323468889988773

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.77  E-value=4.5e-17  Score=133.59  Aligned_cols=211  Identities=18%  Similarity=0.208  Sum_probs=154.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      ||||||+|.||.+++++|.++|+.|+...|............   ++.++.+|+.+.++++++++..     .+|.|||.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL---NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT---TEEEEESETTSHHHHHHHHHHH-----TESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc---eEEEEEeecccccccccccccc-----CceEEEEe
Confidence            799999999999999999999999887777766543332222   6889999999999999999876     79999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccchh
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYTI  159 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~~  159 (262)
                      |+....     ....+...+.++.|+.+...+++.+..    .+ ..++|++||.......           .....|+.
T Consensus        73 a~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~  142 (236)
T PF01370_consen   73 AAFSSN-----PESFEDPEEIIEANVQGTRNLLEAARE----AG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGA  142 (236)
T ss_dssp             BSSSSH-----HHHHHSHHHHHHHHHHHHHHHHHHHHH----HT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHH
T ss_pred             eccccc-----ccccccccccccccccccccccccccc----cc-ccccccccccccccccccccccccccccccccccc
Confidence            986421     123356778888898888888877654    23 4699999996443322           13457999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCC-CCCCcc-chHhHHHhh---h--------cccCCCCCHHHHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPF-SAGTIN-DVEGFVCKV---A--------NLKGIVLKAKHVAEAA  226 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~-~~~~~~-~~~~~~~~~---~--------~~~~~~~~~~~va~~~  226 (262)
                      +|...+.+.+.+....   ++++..++|+.+.+|. ...... -........   .        ...+.++..+|+++++
T Consensus       143 ~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  219 (236)
T PF01370_consen  143 SKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAI  219 (236)
T ss_dssp             HHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHH
T ss_pred             cccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHH
Confidence            9999999999998875   8999999999999988 111111 111111111   0        1113367899999999


Q ss_pred             HHHcCCCCCceeceEEee
Q 024839          227 LFLASDESAYVSGHDLVV  244 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~  244 (262)
                      +.++....  ..|+.++|
T Consensus       220 ~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  220 VAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHSC--TTTEEEEE
T ss_pred             HHHHhCCC--CCCCEEEe
Confidence            99997765  56787776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.77  E-value=4.7e-17  Score=141.47  Aligned_cols=215  Identities=16%  Similarity=0.179  Sum_probs=148.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC-CHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR-DEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +++|||||+|.||++++++|.+. |++|++++|+.+.....   .....+.++.+|+. +.+.+.++++       ++|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~   71 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---VNHPRMHFFEGDITINKEWIEYHVK-------KCDV   71 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---ccCCCeEEEeCCCCCCHHHHHHHHc-------CCCE
Confidence            46999999999999999999986 69999998876543322   22245888999998 6666655544       6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------------  151 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------------  151 (262)
                      |||+|+...+.     ...++....+++|+.+...+++++..    .+  .++|++||...+.+.               
T Consensus        72 ViH~aa~~~~~-----~~~~~p~~~~~~n~~~~~~ll~aa~~----~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~  140 (347)
T PRK11908         72 ILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYG  140 (347)
T ss_pred             EEECcccCChH-----HhhcCcHHHHHHHHHHHHHHHHHHHh----cC--CeEEEEecceeeccCCCcCcCccccccccC
Confidence            99999865221     11233457789999999888876542    22  589999997433210               


Q ss_pred             ---CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc------cc-hHhHHH----hh-------h
Q 024839          152 ---SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI------ND-VEGFVC----KV-------A  210 (262)
Q Consensus       152 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~------~~-~~~~~~----~~-------~  210 (262)
                         .....|+.+|.+.+.+++.++..   +|+.+..++|+.+.+|......      .. ......    ..       .
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g  217 (347)
T PRK11908        141 PINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGG  217 (347)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCC
Confidence               01226999999999999988765   4889999999999887532210      00 111110    00       0


Q ss_pred             cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          211 NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       211 ~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ...+.++..+|+++++..++........|+.+++.++
T Consensus       218 ~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        218 SQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             ceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            1223578999999999998875432245888999774

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.75  E-value=1.4e-16  Score=149.70  Aligned_cols=226  Identities=15%  Similarity=0.050  Sum_probs=154.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..++|+||||||+|.||++++++|.++  +++|+.++|..  +....+.......++.++.+|+.|.+.+++++..    
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh----
Confidence            356899999999999999999999998  67888888752  2222222211224688999999998887665432    


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  150 (262)
                       .++|+|||+|+.....     ....+..+.+++|+.++..+++++..    .+...++|++||...+..          
T Consensus        79 -~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 -EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             -cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccccCcc
Confidence             3799999999975321     12233457789999999988887643    221469999999653221          


Q ss_pred             ----CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cchHhH-HHhhh-------cccCCC
Q 024839          151 ----GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDVEGF-VCKVA-------NLKGIV  216 (262)
Q Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~-~~~~~-------~~~~~~  216 (262)
                          ..+...|+.+|.+.+.+++.++.+   +++.+..++|+.+++|-.....  ...... .....       ...+.+
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEee
Confidence                112457999999999999988776   4899999999999987542210  100000 00000       011236


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +..+|+++++..++...   ..|+.+++.++...
T Consensus       226 ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        226 LYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             EEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence            78999999999888543   23678888877543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.74  E-value=2e-16  Score=129.60  Aligned_cols=162  Identities=18%  Similarity=0.171  Sum_probs=127.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|||||.|-||++.+.+|++.|++|++++.....-.+..+...   +.+++.|+.|.+-+++++++-     ++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~---~~f~~gDi~D~~~L~~vf~~~-----~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ---FKFYEGDLLDRALLTAVFEEN-----KIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc---CceEEeccccHHHHHHHHHhc-----CCCEEE
Confidence            369999999999999999999999999999987765555444322   679999999998888888764     899999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------CCCcc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------SGPHA  156 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~~~  156 (262)
                      |.||....     ..+.++..+.++.|+.++..|++++...    + ...||| ||.++.++.            .+..+
T Consensus        73 HFAa~~~V-----gESv~~Pl~Yy~NNv~gTl~Ll~am~~~----g-v~~~vF-SStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          73 HFAASISV-----GESVQNPLKYYDNNVVGTLNLIEAMLQT----G-VKKFIF-SSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             ECcccccc-----chhhhCHHHHHhhchHhHHHHHHHHHHh----C-CCEEEE-ecchhhcCCCCCcccCCCCCCCCCCc
Confidence            99997633     3567788999999999999988876543    3 345555 555555443            23458


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVAT  192 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t  192 (262)
                      |+.||...+.+.+.++...   +.++.+++-..+.+
T Consensus       142 YG~sKlm~E~iL~d~~~a~---~~~~v~LRYFN~aG  174 (329)
T COG1087         142 YGRSKLMSEEILRDAAKAN---PFKVVILRYFNVAG  174 (329)
T ss_pred             chhHHHHHHHHHHHHHHhC---CCcEEEEEeccccc
Confidence            9999999999999998884   67888887766654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.73  E-value=2.6e-16  Score=137.91  Aligned_cols=216  Identities=14%  Similarity=0.110  Sum_probs=147.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||+|.||++++++|.++|++|++++|.......   ... ....++.+|+.+.+.+.++++       ++|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~D~   88 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---EDM-FCHEFHLVDLRVMENCLKVTK-------GVDH   88 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---ccc-ccceEEECCCCCHHHHHHHHh-------CCCE
Confidence            57899999999999999999999999999999986432110   000 124678899999887766654       6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------------  149 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------------  149 (262)
                      |||.|+..... ....   .+....+..|+.++..+++++..    .+ ..++|++||...+.                 
T Consensus        89 Vih~Aa~~~~~-~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~  159 (370)
T PLN02695         89 VFNLAADMGGM-GFIQ---SNHSVIMYNNTMISFNMLEAARI----NG-VKRFFYASSACIYPEFKQLETNVSLKESDAW  159 (370)
T ss_pred             EEEcccccCCc-cccc---cCchhhHHHHHHHHHHHHHHHHH----hC-CCEEEEeCchhhcCCccccCcCCCcCcccCC
Confidence            99999865321 1111   12234567899999888886542    23 46999999964221                 


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHh-----hh-------cccC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCK-----VA-------NLKG  214 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~-----~~-------~~~~  214 (262)
                      +..+...|+.+|.+.+.+++.++..   +|+++..++|+.+++|......   .....+...     ..       ...+
T Consensus       160 p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r  236 (370)
T PLN02695        160 PAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTR  236 (370)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEE
Confidence            1223458999999999999988766   4899999999999998532110   001111110     00       0123


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          215 IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       215 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      .++..+|++++++.++...    .++.+++.+|..
T Consensus       237 ~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        237 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             eEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence            3689999999999987543    256788877754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.72  E-value=8.7e-17  Score=137.49  Aligned_cols=211  Identities=18%  Similarity=0.199  Sum_probs=139.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH--HhCCcCEEE
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE--KYGSLDIMY   88 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~~d~li   88 (262)
                      +|||||+|.||++++++|.++|++++++.|+.+.....        .....+|+.|..+.+.+++.+.+  .++++|+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            79999999999999999999999766655554322111        11234677776666666555442  235799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  157 (262)
                      |+|+.... .   +...   ...++.|+.++..+++++..    .+  .++|++||...+..           ..+...|
T Consensus        74 h~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~--~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  140 (308)
T PRK11150         74 HEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLE----RE--IPFLYASSAATYGGRTDDFIEEREYEKPLNVY  140 (308)
T ss_pred             ECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHH----cC--CcEEEEcchHHhCcCCCCCCccCCCCCCCCHH
Confidence            99986422 1   1122   35789999998888887643    33  36999999754321           1234579


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--ccchH-----hHHHhh-h-------cccCCCCCHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--INDVE-----GFVCKV-A-------NLKGIVLKAKHV  222 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~~~-----~~~~~~-~-------~~~~~~~~~~~v  222 (262)
                      +.+|.+.+.+++.++.+   .++.+..++|+.+.+|-....  .....     ...... .       ...+.++.++|+
T Consensus       141 ~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        141 GYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            99999999999887665   479999999999998753221  11110     011000 0       011346799999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++++..++....    |..+++.+|..
T Consensus       218 a~a~~~~~~~~~----~~~yni~~~~~  240 (308)
T PRK11150        218 AAVNLWFWENGV----SGIFNCGTGRA  240 (308)
T ss_pred             HHHHHHHHhcCC----CCeEEcCCCCc
Confidence            999988876432    45888877764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.72  E-value=1e-15  Score=129.50  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=135.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|.||.+++++|.++|++|+++.|.                   .+|+.++++++++++..     ++|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~~~~~-----~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERLLRAI-----RPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHHHHhC-----CCCEEEE
Confidence            37999999999999999999999999998874                   47999999998887653     6899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y~  158 (262)
                      +++.... .    .........+++|+.++..+++++..    .+  .++|++||...+.+           ......|+
T Consensus        57 ~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        57 TAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAAR----HG--ARLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             CCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            9986421 1    12233567789999999999887643    22  48999998643221           11345799


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccchHhHHHhhhc------ccCCCCCHHHHHHHHHHHcC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-INDVEGFVCKVAN------LKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~va~~~~~l~~  231 (262)
                      .+|.+.+.+++.+       +..+..++|+.+.++..... .............      ....++..+|+++++..++.
T Consensus       126 ~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       126 QSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHh
Confidence            9999999888765       45889999999998763211 1110000000000      11235678999999999986


Q ss_pred             CCCCceeceEEeeCCCc
Q 024839          232 DESAYVSGHDLVVDGGF  248 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~  248 (262)
                      ....  -|+.+++.++.
T Consensus       199 ~~~~--~~~~~ni~~~~  213 (287)
T TIGR01214       199 RLAR--ARGVYHLANSG  213 (287)
T ss_pred             hccC--CCCeEEEECCC
Confidence            5311  24566665544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=8.5e-16  Score=131.34  Aligned_cols=210  Identities=17%  Similarity=0.168  Sum_probs=149.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc-CEEEe
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL-DIMYS   89 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~-d~li~   89 (262)
                      +|||||+|.||++++++|.++|++|+.++|.........     ..+.++.+|+.+.+.+.+.++       .. |.+||
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih   70 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDELAK-------GVPDAVIH   70 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHHHHh-------cCCCEEEE
Confidence            999999999999999999999999999999876544322     357789999999855555555       33 99999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------C--CCcc
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------S--GPHA  156 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~--~~~~  156 (262)
                      +|+.......   ... +..+.+.+|+.++..+++++..    .+ ..++|+.||.....+.           +  +..+
T Consensus        71 ~aa~~~~~~~---~~~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          71 LAAQSSVPDS---NAS-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             ccccCchhhh---hhh-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            9997632111   111 4567899999999999998765    23 5788886664433321           1  1114


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHh----HHHhhh-ccc-------CCCCCHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEG----FVCKVA-NLK-------GIVLKAKHV  222 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~----~~~~~~-~~~-------~~~~~~~~v  222 (262)
                      |+.+|.+.+.+++..+.   .+|+.+..++|+.+..|.......  ....    .....+ ...       +.++..+|+
T Consensus       142 Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  218 (314)
T COG0451         142 YGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDV  218 (314)
T ss_pred             HHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHH
Confidence            99999999999999988   468999999999999887554411  1111    111111 011       125679999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ++++..++......    .+++.++.
T Consensus       219 a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         219 ADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHhCCCCc----EEEeCCCC
Confidence            99999999766432    78877764

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.72  E-value=1.7e-15  Score=135.30  Aligned_cols=214  Identities=17%  Similarity=0.116  Sum_probs=144.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH-HHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++++||||||+|.||++++++|.++|++|++++|..... +.........++.++..|+.++.     +       .++
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~  184 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEV  184 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCC
Confidence            3678999999999999999999999999999987653221 12112223346778888987642     1       258


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--------------
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--------------  150 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--------------  150 (262)
                      |+|||.|+..... .    ..++..+.+++|+.++..+++++..    .+  .++|++||...+.+              
T Consensus       185 D~ViHlAa~~~~~-~----~~~~p~~~~~~Nv~gt~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~  253 (442)
T PLN02206        185 DQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQVETYWGNV  253 (442)
T ss_pred             CEEEEeeeecchh-h----hhcCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECChHHhCCCCCCCCCccccccC
Confidence            9999999865221 1    1123467889999999999887653    23  38999999764321              


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHh----hhcc-------cCCC
Q 024839          151 --GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCK----VANL-------KGIV  216 (262)
Q Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~----~~~~-------~~~~  216 (262)
                        ......|+.+|.+.+.+++.+...   +++.+..++|+.+++|........ .......    ...+       .+.+
T Consensus       254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdf  330 (442)
T PLN02206        254 NPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  330 (442)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeE
Confidence              112357999999999999887666   489999999999988753211111 1111111    1101       1236


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +.++|+++++..++....    +..+++.+|..
T Consensus       331 i~V~Dva~ai~~a~e~~~----~g~yNIgs~~~  359 (442)
T PLN02206        331 QFVSDLVEGLMRLMEGEH----VGPFNLGNPGE  359 (442)
T ss_pred             EeHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence            789999999998885432    34788877653

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.71  E-value=9.2e-16  Score=135.20  Aligned_cols=213  Identities=10%  Similarity=0.040  Sum_probs=142.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH--HHhhh--CCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ--VVSSI--GPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~--~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ..++++|||||+|+||++++++|.++|++|+++.|+......  ..+..  ...++.++++|++|++++.++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            357899999999999999999999999999999998654321  01111  1136789999999999999888743   1


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      .++|+||||++...  ..    .    .+.+++|+.+...+++++.    +.+ .+++|++||.+...+   ...|..+|
T Consensus       135 ~~~D~Vi~~aa~~~--~~----~----~~~~~vn~~~~~~ll~aa~----~~g-v~r~V~iSS~~v~~p---~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRT--GG----V----KDSWKIDYQATKNSLDAGR----EVG-AKHFVLLSAICVQKP---LLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCC--CC----C----ccchhhHHHHHHHHHHHHH----HcC-CCEEEEEeeccccCc---chHHHHHH
Confidence            26999999987531  11    1    1235677777777776653    334 578999999875433   34678889


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhhhc-ccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKVAN-LKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ...+...+.     ...+++...++|+.+..++.....   ............ +...+++.+|+|+.+..++.++.  .
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~--~  269 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES--K  269 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc--c
Confidence            888877654     246899999999888754321100   000000000000 01125788999999999886443  2


Q ss_pred             eceEEeeCC
Q 024839          238 SGHDLVVDG  246 (262)
Q Consensus       238 ~G~~i~~dg  246 (262)
                      .|+.+++.|
T Consensus       270 ~~~~~~Igg  278 (390)
T PLN02657        270 INKVLPIGG  278 (390)
T ss_pred             cCCEEEcCC
Confidence            478899976

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.71  E-value=8.3e-16  Score=131.60  Aligned_cols=214  Identities=14%  Similarity=0.134  Sum_probs=142.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           11 AIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +|||||+|.||.+++++|.++|+ .|++++|..... ... .+.   ...+..|+.+.+.++.+.+.   .+.++|+|||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~---~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA---DLVIADYIDKEDFLDRLEKG---AFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh---heeeeccCcchhHHHHHHhh---ccCCCCEEEE
Confidence            68999999999999999999997 688877654321 111 111   13466788887666665542   3457999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y~  158 (262)
                      +|+...       .+.++....+++|+.+...+++++..    .+  .++|++||...+..           ..+...|+
T Consensus        73 ~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~  139 (314)
T TIGR02197        73 QGACSD-------TTETDGEYMMENNYQYSKRLLDWCAE----KG--IPFIYASSAATYGDGEAGFREGRELERPLNVYG  139 (314)
T ss_pred             CccccC-------ccccchHHHHHHHHHHHHHHHHHHHH----hC--CcEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence            999642       12345677889999999999887653    22  47999999654321           11456899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--ccc-hHhHHHhh----hc-------------ccCCCCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--IND-VEGFVCKV----AN-------------LKGIVLK  218 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~-~~~~~~~~----~~-------------~~~~~~~  218 (262)
                      .+|.+.+.+++...... ..++.+..++|+.+.+|-....  ... ........    ..             ..+.++.
T Consensus       140 ~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVY  218 (314)
T ss_pred             HHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEE
Confidence            99999999998643321 2357899999999988753211  101 11111110    00             1134778


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      .+|+++++..++.. .   .+..+++.++..+
T Consensus       219 v~D~a~~i~~~~~~-~---~~~~yni~~~~~~  246 (314)
T TIGR02197       219 VKDVVDVNLWLLEN-G---VSGIFNLGTGRAR  246 (314)
T ss_pred             HHHHHHHHHHHHhc-c---cCceEEcCCCCCc
Confidence            99999999999865 1   3568888887654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.69  E-value=9.9e-16  Score=136.54  Aligned_cols=213  Identities=18%  Similarity=0.131  Sum_probs=142.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.+++|||||+|.||++++++|.++|++|++++|.... ...........++.++..|+.+..     +       .++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            45689999999999999999999999999999876322 111111122235677888886542     1       2589


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----------------  149 (262)
                      +|||+|+..... .    ...+-.+.+++|+.+...+++++...    +  .++|++||...+.                
T Consensus       187 ~ViHlAa~~~~~-~----~~~~p~~~~~~Nv~gT~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        187 QIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             EEEECceeccch-h----hccCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            999999864221 1    11234678999999999998876542    2  3899998875322                


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhH----HHhhhc-------ccCCCC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGF----VCKVAN-------LKGIVL  217 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~----~~~~~~-------~~~~~~  217 (262)
                      +......|+.+|.+.+.+++.++..   +++.+..++|+.+++|-....... ...+    ......       ..+.++
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence            1112346999999999999988766   489999999999998753211100 1111    111110       113478


Q ss_pred             CHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ..+|+++++..++....    +..+++.+|..
T Consensus       333 ~V~Dva~ai~~~~~~~~----~giyNIgs~~~  360 (436)
T PLN02166        333 YVSDLVDGLVALMEGEH----VGPFNLGNPGE  360 (436)
T ss_pred             EHHHHHHHHHHHHhcCC----CceEEeCCCCc
Confidence            89999999998885432    34788876653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.69  E-value=1.2e-15  Score=130.14  Aligned_cols=201  Identities=16%  Similarity=0.131  Sum_probs=138.7

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeCC
Q 024839           12 IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNA   91 (262)
Q Consensus        12 lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~a   91 (262)
                      |||||+|.||++++++|.+.|++|+++.+.                  ..+|+.+.++++++++..     ++|+|||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAFFAKE-----KPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEee
Confidence            699999999999999999999988766432                  247999999888887752     689999999


Q ss_pred             cCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------------CCCc
Q 024839           92 GVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------------SGPH  155 (262)
Q Consensus        92 g~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------~~~~  155 (262)
                      +..... .   ...++..+.+++|+.++..+++++..    .+ .+++|++||...+.+.                +...
T Consensus        58 ~~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~  128 (306)
T PLN02725         58 AKVGGI-H---ANMTYPADFIRENLQIQTNVIDAAYR----HG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNE  128 (306)
T ss_pred             eeeccc-c---hhhhCcHHHHHHHhHHHHHHHHHHHH----cC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcc
Confidence            864211 0   11123456788899998888887653    23 4689999996532211                1122


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC------ccchHhHH-----Hhh--------hcccCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT------INDVEGFV-----CKV--------ANLKGIV  216 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~------~~~~~~~~-----~~~--------~~~~~~~  216 (262)
                      .|+.+|.+.+.+++.+..++   ++++..++|+.+.+|.....      .+......     ...        ..+.+.+
T Consensus       129 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~  205 (306)
T PLN02725        129 WYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREF  205 (306)
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecc
Confidence            49999999999998887664   79999999999998853210      00000000     000        1112357


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++|++++++.++....   .+..+++.+|..+
T Consensus       206 i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~  236 (306)
T PLN02725        206 LHVDDLADAVVFLMRRYS---GAEHVNVGSGDEV  236 (306)
T ss_pred             ccHHHHHHHHHHHHhccc---cCcceEeCCCCcc
Confidence            899999999999986532   2355688877654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.68  E-value=3.7e-15  Score=128.03  Aligned_cols=204  Identities=10%  Similarity=0.027  Sum_probs=138.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++||||+|.||++++++|.++|++|.++.|+.+......    ...+.++.+|+.|++++.++++       .+|+|||
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~   70 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPPSFK-------GVTAIID   70 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHHHHC-------CCCEEEE
Confidence            6999999999999999999999999999999865433221    2357899999999998887776       6899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR  169 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  169 (262)
                      +++.. . .        +.....++|+.+...+++++..    .+ -.++|++||..+..  .....|..+|...+.+.+
T Consensus        71 ~~~~~-~-~--------~~~~~~~~~~~~~~~l~~aa~~----~g-vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         71 ASTSR-P-S--------DLYNAKQIDWDGKLALIEAAKA----AK-IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             CCCCC-C-C--------CccchhhhhHHHHHHHHHHHHH----cC-CCEEEEeccccccc--cCCChHHHHHHHHHHHHH
Confidence            87532 1 1        1233566788887777776543    34 46999999864432  123467888888776653


Q ss_pred             HHHHHHCCCCcEEEEEeCCCccCCCCCCCccch---HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDV---EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       170 ~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                             ..|+....++|+.+...+........   .............++.++|+++++..++..+..  .|+++++.|
T Consensus       134 -------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~ni~g  204 (317)
T CHL00194        134 -------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET--KNKTFPLVG  204 (317)
T ss_pred             -------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccc--cCcEEEecC
Confidence                   25889999999866543221110000   000000000113456889999999998865432  489999988


Q ss_pred             Cccc
Q 024839          247 GFTA  250 (262)
Q Consensus       247 G~~~  250 (262)
                      +..+
T Consensus       205 ~~~~  208 (317)
T CHL00194        205 PKSW  208 (317)
T ss_pred             CCcc
Confidence            8654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.65  E-value=8.9e-15  Score=124.65  Aligned_cols=146  Identities=14%  Similarity=0.061  Sum_probs=108.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|.||++++++|.++| +|+.++|...               .+..|+.|.+++.++++..     ++|+|||
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih   60 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKI-----RPDVIVN   60 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999999 7888877532               2457999999998887743     6899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y~  158 (262)
                      +|+.....     ...++-...+.+|+.++..+++++..    .+  .++|++||...+.+           ..+...|+
T Consensus        61 ~Aa~~~~~-----~~~~~~~~~~~~N~~~~~~l~~aa~~----~g--~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg  129 (299)
T PRK09987         61 AAAHTAVD-----KAESEPEFAQLLNATSVEAIAKAANE----VG--AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG  129 (299)
T ss_pred             CCccCCcc-----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEccceEECCCCCCCcCCCCCCCCCCHHH
Confidence            99975321     12223456678999999999887654    22  47999988643211           12335799


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPF  194 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~  194 (262)
                      .+|.+.+.+++.++.       ....++|+++++|-
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        130 ETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            999999999875432       34888999998874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.61  E-value=7.9e-14  Score=131.05  Aligned_cols=216  Identities=17%  Similarity=0.151  Sum_probs=142.5

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCeEEEeeCCchh--HHHHHhhhCCCceEEEEecCCCHHHH--HHHHHHHHHHhCC
Q 024839           10 VAIIMGAASGIGEATAKLFA--EHGAFVIIADIQDEL--GNQVVSSIGPEKASYRHCDVRDEKQV--EETVAYAIEKYGS   83 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~--~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~i--~~~~~~~~~~~~~   83 (262)
                      ++|||||+|.||++++++|.  +.|++|++++|+...  ...........++.++.+|+.+++..  ...++.+    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  589999999996432  22222222324688999999985310  1111222    37


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------  151 (262)
                      +|+|||+|+.....     .+   ..+..++|+.+...+++++.    +.+ ..++|++||.......            
T Consensus        78 ~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         78 IDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAE----RLQ-AATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             CCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHH----hcC-CCeEEEEeccccccCccCccccccchhh
Confidence            99999999965221     12   34567889999888887654    233 5689999987653211            


Q ss_pred             -CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHhHHHh---hhc--c-------
Q 024839          152 -SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGFVCK---VAN--L-------  212 (262)
Q Consensus       152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~~~~---~~~--~-------  212 (262)
                       .....|+.+|...+.+++.      ..|+.+..++|+.+.++-..+....      .......   ...  +       
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence             1235699999999998863      2589999999999988643221110      0001110   000  0       


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ...++..+|+++++..++..+  ...|+.+++.++..+
T Consensus       219 ~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~  254 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQ  254 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCC
Confidence            012567899999999988643  346899999877543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.60  E-value=6.3e-14  Score=110.72  Aligned_cols=173  Identities=16%  Similarity=0.100  Sum_probs=125.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      |+|+||+|.+|+.++++|.++|++|+++.|++++...      ..++.++++|+.|++++.+.++       +.|.+|++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAALK-------GADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhhhh-------hcchhhhh
Confidence            6899999999999999999999999999999887665      4679999999999988888777       78999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC---------ccchhhh
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP---------HAYTISK  161 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~---------~~Y~~sK  161 (262)
                      ++....          +            ...++.++..+++.+ ..++|++|+.......+..         ..|...|
T Consensus        68 ~~~~~~----------~------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (183)
T PF13460_consen   68 AGPPPK----------D------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDK  124 (183)
T ss_dssp             CHSTTT----------H------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHH
T ss_pred             hhhhcc----------c------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHH
Confidence            975411          1            344555666666666 6799999998866544331         2345555


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      ...+.+.       ...+++...++|+++.++......- ...    ........++.+|+|++++.++.
T Consensus       125 ~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~-~~~----~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  125 REAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRL-IKE----GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEE-ESS----TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeE-Eec----cCCCCcCcCCHHHHHHHHHHHhC
Confidence            5444333       2358999999999998876331111 000    11112357799999999998874

...

>PRK05865 hypothetical protein; Provisional

Probab=99.60  E-value=5.6e-14  Score=132.68  Aligned_cols=181  Identities=15%  Similarity=0.119  Sum_probs=129.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++||||+|+||++++++|.++|++|++++|+....      .. .++.++.+|+.+.+++.++++       ++|+|||
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~-~~v~~v~gDL~D~~~l~~al~-------~vD~VVH   67 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP-SSADFIAADIRDATAVESAMT-------GADVVAH   67 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc-cCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            699999999999999999999999999999875321      11 257789999999999888776       5899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR  169 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  169 (262)
                      +|+...   .           .+++|+.++..+++++    ++.+ .+++|++||..              |.+.+.+++
T Consensus        68 lAa~~~---~-----------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~--------------K~aaE~ll~  114 (854)
T PRK05865         68 CAWVRG---R-----------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH--------------QPRVEQMLA  114 (854)
T ss_pred             CCCccc---c-----------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH--------------HHHHHHHHH
Confidence            997531   1           3578998887776654    3444 56999999853              877776663


Q ss_pred             HHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcc------cCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL------KGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       170 ~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                          +   +++.+..++|+.+++|-....   ..........+      ...++.++|+++++..++....  ..|..++
T Consensus       115 ----~---~gl~~vILRp~~VYGP~~~~~---i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggvyN  182 (854)
T PRK05865        115 ----D---CGLEWVAVRCALIFGRNVDNW---VQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGPVN  182 (854)
T ss_pred             ----H---cCCCEEEEEeceEeCCChHHH---HHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCeEE
Confidence                2   489999999999998742111   11100000001      1136889999999998885322  2356788


Q ss_pred             eCCCcc
Q 024839          244 VDGGFT  249 (262)
Q Consensus       244 ~dgG~~  249 (262)
                      +.+|..
T Consensus       183 Igsg~~  188 (854)
T PRK05865        183 LAAPGE  188 (854)
T ss_pred             EECCCc
Confidence            877654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.60  E-value=1.3e-13  Score=115.00  Aligned_cols=185  Identities=15%  Similarity=0.147  Sum_probs=151.9

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC----
Q 024839            8 GKVAIIMGA-ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG----   82 (262)
Q Consensus         8 ~k~~lItG~-s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~----   82 (262)
                      ..+|||.|. ..-|++.+|.-|-++|+-|+++..+.++.+....+. ...+.....|..++.++...+.++.+...    
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV   81 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence            457999995 799999999999999999999999988776655554 45678888898888887777777766544    


Q ss_pred             ----------CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCc-EEEEecCCCccCC
Q 024839           83 ----------SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRG-SIICTTSTASTVG  150 (262)
Q Consensus        83 ----------~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~-~ii~isS~~~~~~  150 (262)
                                ++..||.......+.++++.++.++|.+.++.|+..++.+++.++|+++.+. .+. .|++.-|+.+...
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                      2345555544445778999999999999999999999999999999998721 134 4555557777788


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP  193 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~  193 (262)
                      .+..++-.+...++.+|+.+|.+|+.+.||.|..+..|.++-.
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            8889999999999999999999999999999999999998765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.59  E-value=7.6e-13  Score=99.02  Aligned_cols=217  Identities=16%  Similarity=0.156  Sum_probs=160.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--CcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~d   85 (262)
                      .++|+|-||-+.+|.+++..|..++|.|.-++..+..-.        +.-..+..|-+=.++-+.+++++-+..+  ++|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A--------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA--------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc--------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            467999999999999999999999999988876654321        2234566666666777778888877653  699


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      .+++-||.+.....-..--.+...-|+.-.+.......+.+..+++.   .|.+-..+.-++..+.|++-.|+++|+|+.
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH  151 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGGTPGMIGYGMAKAAVH  151 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCCCCcccchhHHHHHHH
Confidence            99999998732211111112334455666666666666666655532   567777777788889999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          166 GLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       166 ~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      .++++|+.+-.  +.|--+..|.|-..+|||.+.-.++.         ......+.+.+++....+..+..+.-+|..+.
T Consensus       152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A---------DfssWTPL~fi~e~flkWtt~~~RPssGsLlq  222 (236)
T KOG4022|consen  152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA---------DFSSWTPLSFISEHFLKWTTETSRPSSGSLLQ  222 (236)
T ss_pred             HHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC---------cccCcccHHHHHHHHHHHhccCCCCCCCceEE
Confidence            99999998865  35788999999999999987654432         12445577899999999998888888888765


Q ss_pred             e
Q 024839          244 V  244 (262)
Q Consensus       244 ~  244 (262)
                      +
T Consensus       223 i  223 (236)
T KOG4022|consen  223 I  223 (236)
T ss_pred             E
Confidence            4

>PLN02996 fatty acyl-CoA reductase

Probab=99.58  E-value=7.9e-14  Score=126.17  Aligned_cols=218  Identities=13%  Similarity=0.125  Sum_probs=143.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC---CeEEEeeCCchh---HHHHHhh-------------h-------CCCceEE
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG---AFVIIADIQDEL---GNQVVSS-------------I-------GPEKASY   59 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g---~~V~~~~r~~~~---~~~~~~~-------------~-------~~~~~~~   59 (262)
                      ++||+++||||+|.||+.+++.|++.+   .+|++..|....   .+.+..+             .       ...++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            579999999999999999999998764   356777775421   1111101             0       0147889


Q ss_pred             EEecCCC-------HHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 024839           60 RHCDVRD-------EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA  132 (262)
Q Consensus        60 ~~~D~~~-------~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~  132 (262)
                      +..|+++       .+.++++++       .+|+|||+|+....        .++....+++|+.++..+++++...   
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF--------DERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC--------cCCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            9999984       333445444       68999999997531        1246778999999999998876532   


Q ss_pred             CCCCcEEEEecCCCccCCC-------------------------------------------------------------
Q 024839          133 NKIRGSIICTTSTASTVGG-------------------------------------------------------------  151 (262)
Q Consensus       133 ~~~~~~ii~isS~~~~~~~-------------------------------------------------------------  151 (262)
                      .+ ..+++++||.......                                                             
T Consensus       151 ~~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 VK-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             CC-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence            12 4589999887543210                                                             


Q ss_pred             -CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---c---hHhHHH--hhh---------ccc
Q 024839          152 -SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---D---VEGFVC--KVA---------NLK  213 (262)
Q Consensus       152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~---~~~~~~--~~~---------~~~  213 (262)
                       .....|+.||++.+.+++..+     .++.+..++|..|.++.......   .   ......  ...         ...
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence             012359999999999996542     37999999999998876433211   0   011110  001         112


Q ss_pred             CCCCCHHHHHHHHHHHcCCCC-CceeceEEeeCCC
Q 024839          214 GIVLKAKHVAEAALFLASDES-AYVSGHDLVVDGG  247 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~-~~i~G~~i~~dgG  247 (262)
                      ..++.+++++++++.++.... ..-.++++++..|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            457789999999988875421 1124678898877

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.55  E-value=1.7e-13  Score=113.56  Aligned_cols=163  Identities=18%  Similarity=0.235  Sum_probs=124.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch----hHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++||||||.|.||.+.+.+|.+.|+.|++++....    .+....+.... ..+.++..|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            578999999999999999999999999999986543    33333333332 68999999999999999999876     


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------CC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------GG  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~  151 (262)
                      ++|.|+|-|+..+..     .+.+.....++.|+.|.+.++....    +.+ ...+|+.||..-+.           +.
T Consensus        77 ~fd~V~Hfa~~~~vg-----eS~~~p~~Y~~nNi~gtlnlLe~~~----~~~-~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG-----ESMENPLSYYHNNIAGTLNLLEVMK----AHN-VKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccc-----hhhhCchhheehhhhhHHHHHHHHH----HcC-CceEEEecceeeecCcceeeccCcCCC
Confidence            699999999976432     3555568899999999998887644    434 56888888765332           12


Q ss_pred             C-CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC
Q 024839          152 S-GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF  188 (262)
Q Consensus       152 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG  188 (262)
                      . +..+|+.+|.+++...+.+...+.   -.+..++-.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~---~~~~~LRyf  181 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG---WKVTGLRYF  181 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc---ceEEEEEec
Confidence            2 567899999999999998888754   444444433

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.54  E-value=5.7e-13  Score=113.97  Aligned_cols=224  Identities=15%  Similarity=0.124  Sum_probs=153.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhh--CCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSI--GPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +..++|||||+|.+|++++.+|.+.+  .++.+++..+....-..+..  ...++.++++|+.+..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            46799999999999999999999998  78999988865322111122  34789999999999998888777       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------  151 (262)
                      +. .+||+|+..-+     .....+-+..+++|+.|+..++.+...    .+ ..++|++||..-.++.           
T Consensus        76 ~~-~Vvh~aa~~~~-----~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP-----DFVENDRDLAMRVNVNGTLNVIEACKE----LG-VKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccCc-----cccccchhhheeecchhHHHHHHHHHH----hC-CCEEEEecCceEEeCCeecccCCCCCC
Confidence            66 78888775422     233335788999999998777776553    34 6799999997654321           


Q ss_pred             -C--CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhc--------ccCCCCCHH
Q 024839          152 -S--GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN--------LKGIVLKAK  220 (262)
Q Consensus       152 -~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  220 (262)
                       +  ....|+.||+-.+.+++..+.   ..+....+++|-.|++|--+...+...........        ....+...+
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~  221 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGE  221 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEec
Confidence             1  225899999999999987775   45789999999999998766554443333322111        001112222


Q ss_pred             HHH---HHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          221 HVA---EAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       221 ~va---~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      -++   -.....+.+.+..++||.+.++-|....
T Consensus       222 Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  222 NVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             hhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            122   1222222325567899999998887653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.50  E-value=5.5e-12  Score=107.42  Aligned_cols=197  Identities=13%  Similarity=0.062  Sum_probs=118.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ..+++|||||+|.||++++++|.++|++|+...                      .|+.+.+.+...++.     .++|+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~-----~~~D~   60 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDA-----VKPTH   60 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHh-----cCCCE
Confidence            356899999999999999999999999987421                      234555555544443     26999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------------  149 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------------  149 (262)
                      |||+||..+.. . .+...++-.+.+++|+.++..+++++...    + . +.+++||.+.+.                 
T Consensus        61 ViH~Aa~~~~~-~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         61 VFNAAGVTGRP-N-VDWCESHKVETIRANVVGTLTLADVCRER----G-L-VLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             EEECCcccCCC-C-chhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-C-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            99999976321 1 11223445788999999999999887542    2 2 345555432110                 


Q ss_pred             -CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh-ccc-CCCCCHHHHHHHH
Q 024839          150 -GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA-NLK-GIVLKAKHVAEAA  226 (262)
Q Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~va~~~  226 (262)
                       +.+....|+.+|.+.+.+++.++..   .++|+     +....+-................ ... ..+...+|+++++
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al  204 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPIS  204 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHH
Confidence             0012357999999999999876532   34444     22211110000000111111100 011 2367889999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCccc
Q 024839          227 LFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++...   .+| .+++.+|..+
T Consensus       205 ~~~l~~~---~~g-~yNigs~~~i  224 (298)
T PLN02778        205 IEMAKRN---LTG-IYNFTNPGVV  224 (298)
T ss_pred             HHHHhCC---CCC-eEEeCCCCcc
Confidence            9988543   234 8888666543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.49  E-value=2.8e-13  Score=114.61  Aligned_cols=199  Identities=16%  Similarity=0.064  Sum_probs=127.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++||||++|-||.++.++|.++|++|+.++|.                   .+|+.|.+++.+++++.     ++|+|||
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~-----~pd~Vin   57 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAF-----KPDVVIN   57 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH-------SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHh-----CCCeEec
Confidence            69999999999999999999999999988776                   67999999999998876     7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~  158 (262)
                      +||....     +.-.++-+..+.+|+.++..+.+.+..     . +.++|++||..-+.+.           .+...||
T Consensus        58 ~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~-----~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG  126 (286)
T PF04321_consen   58 CAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE-----R-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG  126 (286)
T ss_dssp             ------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH-----C-T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH
T ss_pred             cceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH-----c-CCcEEEeeccEEEcCCcccccccCCCCCCCCHHH
Confidence            9987521     122344678899999999998887653     1 5799999997544322           2345899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhc------ccCCCCCHHHHHHHHHHHcCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~~~l~~~  232 (262)
                      -+|...+...+..   .   . ....++++++.++-...+.............      ..+.+...+|+|+.+..++..
T Consensus       127 ~~K~~~E~~v~~~---~---~-~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~  199 (286)
T PF04321_consen  127 RSKLEGEQAVRAA---C---P-NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEK  199 (286)
T ss_dssp             HHHHHHHHHHHHH-------S-SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh---c---C-CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence            9999999988762   1   1 6788899999887222221111111111100      113456789999999999965


Q ss_pred             CCC-ceeceEEeeCCCccc
Q 024839          233 ESA-YVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~-~i~G~~i~~dgG~~~  250 (262)
                      ... .-.+.++++.|.-.+
T Consensus       200 ~~~~~~~~Giyh~~~~~~~  218 (286)
T PF04321_consen  200 NLSGASPWGIYHLSGPERV  218 (286)
T ss_dssp             HHH-GGG-EEEE---BS-E
T ss_pred             cccccccceeEEEecCccc
Confidence            421 112456777766543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.47  E-value=2.9e-12  Score=106.04  Aligned_cols=181  Identities=20%  Similarity=0.171  Sum_probs=131.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      +||||++|-+|.+++++|. .+++|+.++|.+                   +|++|++.+.+++++.     +||+|||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~-----~PDvVIn~   57 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRET-----RPDVVINA   57 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhh-----CCCEEEEC
Confidence            9999999999999999998 678998887765                   7999999999999877     89999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccchh
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYTI  159 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~~  159 (262)
                      |++...     +.-..+-+..+.+|..++..+.++....      .-.+|++|+-.-+.+.           .+...||.
T Consensus        58 AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~  126 (281)
T COG1091          58 AAYTAV-----DKAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGR  126 (281)
T ss_pred             cccccc-----ccccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhH
Confidence            998632     2233346788999999999999987643      5689999986543322           23458999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh-------cccCCCCCHHHHHHHHHHHcCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA-------NLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ||.+-+..++...       -+...++..++.+.....+... .....+..       -..+.+...+|+|+.+..++..
T Consensus       127 sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~t-ml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~  198 (281)
T COG1091         127 SKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVKT-MLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEK  198 (281)
T ss_pred             HHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHHH-HHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhc
Confidence            9999999887653       2445556666655543222111 00011111       1225567889999999999876


Q ss_pred             CCC
Q 024839          233 ESA  235 (262)
Q Consensus       233 ~~~  235 (262)
                      ...
T Consensus       199 ~~~  201 (281)
T COG1091         199 EKE  201 (281)
T ss_pred             ccc
Confidence            643

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.44  E-value=3.7e-12  Score=105.75  Aligned_cols=160  Identities=16%  Similarity=0.159  Sum_probs=99.6

Q ss_pred             EecCCChHHHHHHHHHHHcCC--eEEEeeCCchh---HHHHHhhhC------------CCceEEEEecCCCH------HH
Q 024839           13 IMGAASGIGEATAKLFAEHGA--FVIIADIQDEL---GNQVVSSIG------------PEKASYRHCDVRDE------KQ   69 (262)
Q Consensus        13 ItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~D~~~~------~~   69 (262)
                      ||||+|.||.++..+|++++.  +|++..|....   .+++.+.+.            ..+++++..|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89998887532   223322221            36899999999975      34


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-  148 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-  148 (262)
                      .+.+.+       .+|+|||+|+......        .+.+..++|+.|+..+++.+.    ..+ ..+++++||.... 
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~----~~~-~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAA----QGK-RKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHT----SSS----EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHH----hcc-CcceEEeccccccC
Confidence            444444       5899999998763321        345578899999999888665    222 3499999993211 


Q ss_pred             -CC------------------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCC
Q 024839          149 -VG------------------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS  195 (262)
Q Consensus       149 -~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~  195 (262)
                       ..                  ......|..||...+.+++..+.+   .|+.+..++||.+.+...
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~~~  203 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGDSR  203 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-SSS
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccccCC
Confidence             11                  012247999999999999988876   489999999999987433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.42  E-value=6.9e-12  Score=106.10  Aligned_cols=195  Identities=15%  Similarity=0.137  Sum_probs=121.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC-cCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS-LDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-~d~li   88 (262)
                      ++|||||+|.||++++++|.++|++|.+..|+.+....       ..+..+.+|+.|++++.++++.. +.... +|.++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-------CCCccccccCCCHHHHHHHHhcc-cCcCCceeEEE
Confidence            38999999999999999999999999999998765321       24556789999999999888643 22234 89999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ++++.. .       ..  ..            ..+.++...++.+ ..+||++||.....+.       ..+...+.+.
T Consensus        73 ~~~~~~-~-------~~--~~------------~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------~~~~~~~~~l  122 (285)
T TIGR03649        73 LVAPPI-P-------DL--AP------------PMIKFIDFARSKG-VRRFVLLSASIIEKGG-------PAMGQVHAHL  122 (285)
T ss_pred             EeCCCC-C-------Ch--hH------------HHHHHHHHHHHcC-CCEEEEeeccccCCCC-------chHHHHHHHH
Confidence            987632 1       10  00            1122344445555 6799999986543321       1233222222


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCC----ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGT----INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.      ..|+....++|+++...+....    .................+++++|++++++.++.++..  .|+.+.+
T Consensus       123 ~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l  194 (285)
T TIGR03649       123 DS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVV  194 (285)
T ss_pred             Hh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEe
Confidence            21      1489999999998876542211    0000000000111113478999999999999876432  2566666


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      .|+..+
T Consensus       195 ~g~~~~  200 (285)
T TIGR03649       195 LGPELL  200 (285)
T ss_pred             eCCccC
Confidence            665433

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.42  E-value=2.8e-11  Score=122.61  Aligned_cols=217  Identities=15%  Similarity=0.082  Sum_probs=141.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC----CeEEEeeCCchhHH---HHHhhh---------CCCceEEEEecCCCH----
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG----AFVIIADIQDELGN---QVVSSI---------GPEKASYRHCDVRDE----   67 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g----~~V~~~~r~~~~~~---~~~~~~---------~~~~~~~~~~D~~~~----   67 (262)
                      .++++|||++|.||.+++.+|.+++    ++|+...|......   ...+..         ...++.++..|++++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    78888888743322   111111         013688999999754    


Q ss_pred             --HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           68 --KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        68 --~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                        +..+++.       ..+|++||+|+....     ...   +......|+.++..+++.+..    .+ ..+++++||.
T Consensus      1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~vSS~ 1110 (1389)
T TIGR03443      1051 SDEKWSDLT-------NEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAE----GK-AKQFSFVSST 1110 (1389)
T ss_pred             CHHHHHHHH-------hcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHh----CC-CceEEEEeCe
Confidence              3333332       368999999987531     112   344556799999888886542    23 4589999996


Q ss_pred             CccCC-----------------C-----------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC
Q 024839          146 ASTVG-----------------G-----------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG  197 (262)
Q Consensus       146 ~~~~~-----------------~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~  197 (262)
                      .....                 .           .....|+.||.+.+.+++.++.    .|+.+..++||.+.++...+
T Consensus      1111 ~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1111 SALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             eecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcC
Confidence            54311                 0           0124599999999999876543    48999999999998875433


Q ss_pred             Cccc---hHhHHHhh---h-cc----cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          198 TIND---VEGFVCKV---A-NL----KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       198 ~~~~---~~~~~~~~---~-~~----~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ....   ........   . .|    ...++++++++++++.++........+..+++.++.
T Consensus      1187 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1187 ATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             CCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            3211   11111110   0 01    133678999999999998654322234567776664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN00016 RNA-binding protein; Provisional

Probab=99.42  E-value=2e-11  Score=107.50  Aligned_cols=199  Identities=15%  Similarity=0.118  Sum_probs=124.8

Q ss_pred             CCCEEEEe----cCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH-------hhhCCCceEEEEecCCCHHHHHHHHH
Q 024839            7 QGKVAIIM----GAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV-------SSIGPEKASYRHCDVRDEKQVEETVA   75 (262)
Q Consensus         7 ~~k~~lIt----G~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~i~~~~~   75 (262)
                      ..++||||    ||+|.||.+++++|.++|++|+++.|.........       ..+....+.++.+|+.+   +.+++.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            45789999    99999999999999999999999999865432211       12222347888898876   333321


Q ss_pred             HHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC--
Q 024839           76 YAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG--  153 (262)
Q Consensus        76 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--  153 (262)
                           ...+|+|||+++..          .           .+.    +.++..+++.+ -.++|++||...+.....  
T Consensus       128 -----~~~~d~Vi~~~~~~----------~-----------~~~----~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p  176 (378)
T PLN00016        128 -----GAGFDVVYDNNGKD----------L-----------DEV----EPVADWAKSPG-LKQFLFCSSAGVYKKSDEPP  176 (378)
T ss_pred             -----cCCccEEEeCCCCC----------H-----------HHH----HHHHHHHHHcC-CCEEEEEccHhhcCCCCCCC
Confidence                 13699999987521          1           112    22333344444 569999999765432111  


Q ss_pred             ------CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH--hHHHhhhc--c-----cCCCCC
Q 024839          154 ------PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE--GFVCKVAN--L-----KGIVLK  218 (262)
Q Consensus       154 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~~--~-----~~~~~~  218 (262)
                            ..++. +|...+.+.+       ..++.+..++|+++.+|..........  ........  +     ...++.
T Consensus       177 ~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~  248 (378)
T PLN00016        177 HVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGH  248 (378)
T ss_pred             CCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceec
Confidence                  11222 7887776653       248999999999999885432211100  01111000  1     123668


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++|+++++..++..+.  ..|+.+++.++..
T Consensus       249 v~Dva~ai~~~l~~~~--~~~~~yni~~~~~  277 (378)
T PLN00016        249 VKDLASMFALVVGNPK--AAGQIFNIVSDRA  277 (378)
T ss_pred             HHHHHHHHHHHhcCcc--ccCCEEEecCCCc
Confidence            9999999999986542  3578899887753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.41  E-value=2.1e-11  Score=103.20  Aligned_cols=207  Identities=14%  Similarity=0.057  Sum_probs=118.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      +|||||+|.||.+++++|.++|++|++++|+.+.......      ..  ..|... ..       ..+...++|+|||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~--~~~~~~-~~-------~~~~~~~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW------EG--YKPWAP-LA-------ESEALEGADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc------ee--eecccc-cc-------hhhhcCCCCEEEEC
Confidence            6899999999999999999999999999998765432110      01  112221 11       12233479999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCc-EEEEecCCCccCCCC------------CCccc
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRG-SIICTTSTASTVGGS------------GPHAY  157 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~------------~~~~Y  157 (262)
                      |+.....   .....+.....+++|+.+...+++++..    .+.+. .+|+.|+.. .++..            ....|
T Consensus        65 a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~  136 (292)
T TIGR01777        65 AGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFL  136 (292)
T ss_pred             CCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChH
Confidence            9864221   1234455667888999998887776643    22122 344444432 11110            01112


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHH-------hhhcccCCCCCHHHHHHHHHHHc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVC-------KVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +..+...+...+    .+...++.+..++|+.+.+|.. +..........       ........++..+|+++++..++
T Consensus       137 ~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       137 AELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKG-GALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             HHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCc-chhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence            222222222222    2334589999999999988742 11111000000       00112245789999999999999


Q ss_pred             CCCCCceeceEEeeCCCcc
Q 024839          231 SDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~  249 (262)
                      ..+..  .| .+++.++..
T Consensus       212 ~~~~~--~g-~~~~~~~~~  227 (292)
T TIGR01777       212 ENASI--SG-PVNATAPEP  227 (292)
T ss_pred             cCccc--CC-ceEecCCCc
Confidence            65332  33 577766543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=2.7e-12  Score=104.45  Aligned_cols=213  Identities=18%  Similarity=0.140  Sum_probs=149.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH----Hh--hhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV----VS--SIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +|++||||-+|-=|.-+|+.|.++||.|+...|+.......    .+  ...+.+++.+.+|++|..++.++++.+    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999887774332211    11  112246889999999999999999987    


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-----------cCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-----------TVG  150 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-----------~~~  150 (262)
                       +||-|+|.|+.++.     ..+.++.....+++..|++.++.+..-+-  .+ +.++..-||..-           ..|
T Consensus        78 -~PdEIYNLaAQS~V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~-~~rfYQAStSE~fG~v~~~pq~E~TP  148 (345)
T COG1089          78 -QPDEIYNLAAQSHV-----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EK-KTRFYQASTSELYGLVQEIPQKETTP  148 (345)
T ss_pred             -Cchhheeccccccc-----cccccCcceeeeechhHHHHHHHHHHHhC--Cc-ccEEEecccHHhhcCcccCccccCCC
Confidence             89999999997654     35666677888999999999998654332  11 456666665432           134


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCC---CCcEEEEEeCCCccCCCCCCCccchHhHHHhhh--------cccCCCCCH
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGK---HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA--------NLKGIVLKA  219 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  219 (262)
                      +.+.++|+++|.....++......|.-   .||-+|.=+|.-=.+-.++..............        ...+....+
T Consensus       149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A  228 (345)
T COG1089         149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHA  228 (345)
T ss_pred             CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccch
Confidence            567789999999999999988887643   367777776654433333322221111111110        122446788


Q ss_pred             HHHHHHHHHHcCCC
Q 024839          220 KHVAEAALFLASDE  233 (262)
Q Consensus       220 ~~va~~~~~l~~~~  233 (262)
                      .|.+++.+.++..+
T Consensus       229 ~DYVe~mwlmLQq~  242 (345)
T COG1089         229 KDYVEAMWLMLQQE  242 (345)
T ss_pred             HHHHHHHHHHHccC
Confidence            89999998888665

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.3e-10  Score=91.07  Aligned_cols=170  Identities=14%  Similarity=0.119  Sum_probs=115.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++||||+ |+|.+++++|+++|++|++++|+.+..+.+...+.. .++.++++|++|++++.++++.+.++++++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            69999998 777789999999999999999998777666554432 4678899999999999999999999999999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      +.+-..                       ++-.+..++-..-.+.+ .-+++.+-+..+..+                  
T Consensus        81 ~~vh~~-----------------------~~~~~~~~~~~~gv~~~-~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         81 AWIHSS-----------------------AKDALSVVCRELDGSSE-TYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             Eecccc-----------------------chhhHHHHHHHHccCCC-CceEEEEeCCcCCch------------------
Confidence            877532                       22233332222211112 336776643333211                  


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC-ceece
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA-YVSGH  240 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~-~i~G~  240 (262)
                      +.....++..+....-|..|++...-.                  .|.++-+||++.+......... ++.|+
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDTY------------------SRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCCc------------------cccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence            111122233455667788888854321                  5678899999999988865543 55665

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.36  E-value=2.3e-11  Score=109.52  Aligned_cols=162  Identities=21%  Similarity=0.187  Sum_probs=117.5

Q ss_pred             CCEEE----EecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAI----IMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~l----ItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      |..+|    |+||++|+|.+++..|...|++|+.+.+...+..    ...                           ..+
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~----~~~---------------------------~~~   82 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA----AGW---------------------------GDR   82 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc----cCc---------------------------CCc
Confidence            44556    8888999999999999999999998765544110    000                           113


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      ++.++..+-..        .+.+++.        +.+..++..++.|..   .|+||+++|.....+   ...|+++|++
T Consensus        83 ~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~~---~griv~i~s~~~~~~---~~~~~~akaa  140 (450)
T PRK08261         83 FGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLAP---CGRVVVLGRPPEAAA---DPAAAAAQRA  140 (450)
T ss_pred             ccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhccC---CCEEEEEccccccCC---chHHHHHHHH
Confidence            44344332211        1122222        333556666776632   579999999876533   3469999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.+++|+++.|+ +++++++.|.|++                           ..++++++.+.|++++.+.+++|+.+.
T Consensus       141 l~gl~rsla~E~-~~gi~v~~i~~~~---------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~  192 (450)
T PRK08261        141 LEGFTRSLGKEL-RRGATAQLVYVAP---------------------------GAEAGLESTLRFFLSPRSAYVSGQVVR  192 (450)
T ss_pred             HHHHHHHHHHHh-hcCCEEEEEecCC---------------------------CCHHHHHHHHHHhcCCccCCccCcEEE
Confidence            999999999999 7899999998874                           367899999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      ++++...
T Consensus       193 ~~~~~~~  199 (450)
T PRK08261        193 VGAADAA  199 (450)
T ss_pred             ecCCccc
Confidence            9998753

>PRK12320 hypothetical protein; Provisional

Probab=99.35  E-value=1.3e-10  Score=108.11  Aligned_cols=185  Identities=12%  Similarity=0.088  Sum_probs=121.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|.||++++++|.++|++|++++|.....       ...++.++.+|+.++. +.++++       ++|+|||
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIH   66 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------LDPRVDYVCASLRNPV-LQELAG-------EADAVIH   66 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------ccCCceEEEccCCCHH-HHHHhc-------CCCEEEE
Confidence            599999999999999999999999999999864421       1235788999999873 433332       6899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR  169 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  169 (262)
                      +|+.. ..      .      ...+|+.+..++++++.    +.+  .++|++||..+.   +  ..|.    ..+.+. 
T Consensus        67 LAa~~-~~------~------~~~vNv~Gt~nLleAA~----~~G--vRiV~~SS~~G~---~--~~~~----~aE~ll-  117 (699)
T PRK12320         67 LAPVD-TS------A------PGGVGITGLAHVANAAA----RAG--ARLLFVSQAAGR---P--ELYR----QAETLV-  117 (699)
T ss_pred             cCccC-cc------c------hhhHHHHHHHHHHHHHH----HcC--CeEEEEECCCCC---C--cccc----HHHHHH-
Confidence            99863 11      1      11478888888877664    333  379999876421   1  1232    223322 


Q ss_pred             HHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCC---CCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          170 SAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGI---VLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       170 ~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                         ..   .++.+..++|+.+++|-....... ........  ..++   ++..+|++++++.+++...   +| ++++.
T Consensus       118 ---~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~--~~~~pI~vIyVdDvv~alv~al~~~~---~G-iyNIG  185 (699)
T PRK12320        118 ---ST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSK--VSARPIRVLHLDDLVRFLVLALNTDR---NG-VVDLA  185 (699)
T ss_pred             ---Hh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHH--HcCCceEEEEHHHHHHHHHHHHhCCC---CC-EEEEe
Confidence               22   357899999999999843211111 11111110  1122   3589999999999886432   35 89998


Q ss_pred             CCccc
Q 024839          246 GGFTA  250 (262)
Q Consensus       246 gG~~~  250 (262)
                      +|..+
T Consensus       186 ~~~~~  190 (699)
T PRK12320        186 TPDTT  190 (699)
T ss_pred             CCCee
Confidence            88654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.33  E-value=1.9e-11  Score=99.53  Aligned_cols=223  Identities=13%  Similarity=-0.015  Sum_probs=153.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCC--chhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQ--DELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ...|.++||||.+.||...+..+...-  +..+..+.-  ...+..+.+.....+.++++.|+.+...+..++..     
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----
Confidence            345889999999999999999998863  444433211  11133333333446889999999998888776653     


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------  150 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------  150 (262)
                      .++|.|+|.|+..+..     .+.-+--+.+..|+.+...++++.....    .-.++|.+|+-..+..           
T Consensus        79 ~~id~vihfaa~t~vd-----~s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVD-----RSFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             CchhhhhhhHhhhhhh-----hhcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEecccceecCccccccccccc
Confidence            3899999999976432     2222335667789999888888766432    2568999998653322           


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhh---------cccCCCCCH
Q 024839          151 -GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVA---------NLKGIVLKA  219 (262)
Q Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~  219 (262)
                       ..+..+|+++|+|.+++.+++...|   |+.+..++-+.|++|-.....--. ........         ...+..+.+
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~v  226 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYV  226 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeH
Confidence             1234689999999999999999985   899999999999999655431111 00001111         122446789


Q ss_pred             HHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          220 KHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       220 ~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      +|+++++...+....   .||++++.--+
T Consensus       227 eD~~ea~~~v~~Kg~---~geIYNIgtd~  252 (331)
T KOG0747|consen  227 EDVSEAFKAVLEKGE---LGEIYNIGTDD  252 (331)
T ss_pred             HHHHHHHHHHHhcCC---ccceeeccCcc
Confidence            999999999997633   48888875443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.29  E-value=1.3e-11  Score=100.68  Aligned_cols=93  Identities=13%  Similarity=0.138  Sum_probs=74.4

Q ss_pred             EEEecC-CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           11 AIIMGA-ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        11 ~lItG~-s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      =.||.. +||||+++|++|+++|++|+++++... .    ...     ....+|+.+.++++++++.+.+.++++|++||
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----~~~-----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn   86 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----KPE-----PHPNLSIREIETTKDLLITLKELVQEHDILIH   86 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----ccc-----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence            345555 578999999999999999999876311 1    000     12468999999999999999999999999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIAT  114 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~  114 (262)
                      |||+. ...++.+.+.++|.+++..
T Consensus        87 nAgv~-d~~~~~~~s~e~~~~~~~~  110 (227)
T TIGR02114        87 SMAVS-DYTPVYMTDLEQVQASDNL  110 (227)
T ss_pred             CCEec-cccchhhCCHHHHhhhcch
Confidence            99985 6678889999999988554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.29  E-value=3.3e-10  Score=106.81  Aligned_cols=193  Identities=15%  Similarity=0.081  Sum_probs=120.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+++|||||+|.||++++++|.++|++|..                      ...|++|.+.+.+.++..     ++|+|
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~-----~pd~V  432 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNV-----KPTHV  432 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhh-----CCCEE
Confidence            457999999999999999999999988731                      123577887777766643     79999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------CC-----
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------GG-----  151 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~-----  151 (262)
                      ||+|+..+.. . .+...++..+.+++|+.++..+++++...    +  .+++++||...+.           +.     
T Consensus       433 ih~Aa~~~~~-~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g--~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        433 FNAAGVTGRP-N-VDWCESHKVETIRANVVGTLTLADVCREN----G--LLMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             EECCcccCCC-C-CChHHhCHHHHHHHHhHHHHHHHHHHHHc----C--CeEEEEcccceecCCcccccccCCCCCcCCC
Confidence            9999975321 1 12334456788999999999999987642    2  3456666543210           11     


Q ss_pred             --CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh---hhcccCCCCCHHHHHHHH
Q 024839          152 --SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK---VANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~va~~~  226 (262)
                        +....|+.||.+.+.+++.++.   ...+|+..+..+....+     .+........   ...| ......+++..++
T Consensus       505 ~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~~~~~~~-----~nfv~~~~~~~~~~~vp-~~~~~~~~~~~~~  575 (668)
T PLN02260        505 PNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPISSDLSNP-----RNFITKISRYNKVVNIP-NSMTVLDELLPIS  575 (668)
T ss_pred             CCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecccCCCCc-----cHHHHHHhccceeeccC-CCceehhhHHHHH
Confidence              1236799999999999987642   24566666653322111     0111111110   0011 2234556666666


Q ss_pred             HHHcCCCCCceeceEEeeCCCc
Q 024839          227 LFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      +.++....    |.++++.++-
T Consensus       576 ~~l~~~~~----~giyni~~~~  593 (668)
T PLN02260        576 IEMAKRNL----RGIWNFTNPG  593 (668)
T ss_pred             HHHHHhCC----CceEEecCCC
Confidence            77764321    4678876664

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.29  E-value=3.6e-11  Score=97.95  Aligned_cols=203  Identities=18%  Similarity=0.127  Sum_probs=140.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ..+++++||||+|.||+++|+.|..+|+.|+.++.-...-. .+.....+.++..+..|+..+     ++.       .+
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------ev   92 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------EV   92 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------Hh
Confidence            46789999999999999999999999999999887654433 333334556777888888765     444       47


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--------------
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--------------  150 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--------------  150 (262)
                      |.++|.|+..++.. + ..   .-.+.+..|+.+...++..+..     - +.+++..|+..-+..              
T Consensus        93 D~IyhLAapasp~~-y-~~---npvktIktN~igtln~lglakr-----v-~aR~l~aSTseVYgdp~~hpq~e~ywg~v  161 (350)
T KOG1429|consen   93 DQIYHLAAPASPPH-Y-KY---NPVKTIKTNVIGTLNMLGLAKR-----V-GARFLLASTSEVYGDPLVHPQVETYWGNV  161 (350)
T ss_pred             hhhhhhccCCCCcc-c-cc---CccceeeecchhhHHHHHHHHH-----h-CceEEEeecccccCCcccCCCcccccccc
Confidence            99999998764321 1 11   2356788899998887775543     2 468888887664322              


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-----hHhHH-------HhhhcccCCC
Q 024839          151 --GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-----VEGFV-------CKVANLKGIV  216 (262)
Q Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-----~~~~~-------~~~~~~~~~~  216 (262)
                        -...+.|.-.|...+.|+....++   .||.+...++..+++|..--....     .....       .......+.+
T Consensus       162 npigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF  238 (350)
T KOG1429|consen  162 NPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSF  238 (350)
T ss_pred             CcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEE
Confidence              123457999999999999988877   599999999998888743211100     00000       1111233557


Q ss_pred             CCHHHHHHHHHHHcCCCC
Q 024839          217 LKAKHVAEAALFLASDES  234 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~  234 (262)
                      ....|+.+.++.|...+.
T Consensus       239 ~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  239 QYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             EeHHHHHHHHHHHhcCCC
Confidence            788999999999986553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.27  E-value=1.1e-10  Score=95.06  Aligned_cols=204  Identities=17%  Similarity=0.142  Sum_probs=116.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      ++||||+|-||++++.+|.+.|++|+++.|+....+....    ..+       ...+.+.+..+      .++|+|||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~----~~v-------~~~~~~~~~~~------~~~DavINL   63 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH----PNV-------TLWEGLADALT------LGIDAVINL   63 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC----ccc-------cccchhhhccc------CCCCEEEEC
Confidence            5899999999999999999999999999999876543211    011       11111222111      169999999


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH----HHHH
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH----GLLG  166 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~----a~~~  166 (262)
                      ||..=..++   ++.+.=+++.+.-    +..++.+.....+...++++..-+|..++++......|--...    .+..
T Consensus        64 AG~~I~~rr---Wt~~~K~~i~~SR----i~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~  136 (297)
T COG1090          64 AGEPIAERR---WTEKQKEEIRQSR----INTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQ  136 (297)
T ss_pred             CCCcccccc---CCHHHHHHHHHHH----hHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHH
Confidence            997522111   4554445554444    4445555555554332455555566667777654444433333    3444


Q ss_pred             HHHHHHHHH---CCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh------hcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          167 LVRSAASEL---GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV------ANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       167 ~~~~la~e~---~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +|+.+-.+-   ...|+||..++.|.|-++--.....-...+....      ....-..+..||..+++.|++.+..  +
T Consensus       137 lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~--l  214 (297)
T COG1090         137 LCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ--L  214 (297)
T ss_pred             HHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC--C
Confidence            444332222   2348999999999997753211111001111000      0111225688999999999997643  4


Q ss_pred             ece
Q 024839          238 SGH  240 (262)
Q Consensus       238 ~G~  240 (262)
                      +|.
T Consensus       215 sGp  217 (297)
T COG1090         215 SGP  217 (297)
T ss_pred             CCc
Confidence            454

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.27  E-value=5.1e-10  Score=95.25  Aligned_cols=166  Identities=17%  Similarity=0.187  Sum_probs=120.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCch---hHHHHHhh---------hCCCceEEEEecCC------CHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDE---LGNQVVSS---------IGPEKASYRHCDVR------DEKQ   69 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~---~~~~~~~~---------~~~~~~~~~~~D~~------~~~~   69 (262)
                      +++++|||+|.+|+.+...|..+- .+|++.-|-+.   ..+++.+.         ....++..+..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999988764 58887766543   12222222         23368999999998      4556


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV  149 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~  149 (262)
                      ++++.+       .+|.||||++..+...        ...+....|+.|+..+++.+.     +++...+.++||+....
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~--------pYs~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF--------PYSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC--------cHHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeecc
Confidence            666666       5899999998764322        356778899999988887554     23134599999987432


Q ss_pred             C--------------------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC
Q 024839          150 G--------------------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT  198 (262)
Q Consensus       150 ~--------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~  198 (262)
                      .                    ......|+-||.+.+.+++.....    |.++..++||++..+...+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~tG~  205 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSRTGA  205 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCccCc
Confidence            1                    112358999999999999766544    99999999999987765343

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.18  E-value=1.1e-09  Score=100.61  Aligned_cols=123  Identities=15%  Similarity=0.184  Sum_probs=86.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCCchh---HHHHHhhh-------------C-------CCceEE
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQDEL---GNQVVSSI-------------G-------PEKASY   59 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~~~~---~~~~~~~~-------------~-------~~~~~~   59 (262)
                      +++|+++||||+|.||..++++|++.+.   +|++..|....   .+.+.+++             +       ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4799999999999999999999998764   57777775321   11111111             1       246889


Q ss_pred             EEecCCCH------HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 024839           60 RHCDVRDE------KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN  133 (262)
Q Consensus        60 ~~~D~~~~------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~  133 (262)
                      +..|++++      +..+.+.+       .+|+|||+|+....        .++....+++|+.++..+++.+...   .
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f--------~~~~~~a~~vNV~GT~nLLelA~~~---~  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF--------DERYDVAIDINTRGPCHLMSFAKKC---K  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc--------ccCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence            99999986      33443333       59999999987521        1346788999999999998876532   1


Q ss_pred             CCCcEEEEecCCCc
Q 024839          134 KIRGSIICTTSTAS  147 (262)
Q Consensus       134 ~~~~~ii~isS~~~  147 (262)
                      . ..++|++||...
T Consensus       259 ~-lk~fV~vSTayV  271 (605)
T PLN02503        259 K-LKLFLQVSTAYV  271 (605)
T ss_pred             C-CCeEEEccCcee
Confidence            1 357888888643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.06  E-value=8.7e-10  Score=90.48  Aligned_cols=198  Identities=14%  Similarity=0.111  Sum_probs=119.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      ++|+||+|.+|+.+++.|.+.+++|.++.|+.....  .+.+....++++.+|..|++++.++++       ..|.||++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQALGAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHHTTTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhcccceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            689999999999999999999999999999874321  122222346778999999999988888       89999998


Q ss_pred             CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC--C--CccchhhhHHHHH
Q 024839           91 AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS--G--PHAYTISKHGLLG  166 (262)
Q Consensus        91 ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~--~--~~~Y~~sK~a~~~  166 (262)
                      .+....       ..          ......+++++..    .+ -.++|+ ||........  .  ....-..|..++.
T Consensus        72 ~~~~~~-------~~----------~~~~~~li~Aa~~----ag-Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   72 TPPSHP-------SE----------LEQQKNLIDAAKA----AG-VKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             SSCSCC-------CH----------HHHHHHHHHHHHH----HT--SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             cCcchh-------hh----------hhhhhhHHHhhhc----cc-cceEEE-EEecccccccccccccchhhhhhhhhhh
Confidence            875421       11          1122234444432    23 457764 5544333211  1  1122235665554


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----chHh---HHHhhhcccCCC-CCHHHHHHHHHHHcCCCCCcee
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----DVEG---FVCKVANLKGIV-LKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~---~~~~~~~~~~~~-~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +.+.       .++....|+||++..........    ....   ...........+ .+.+|+++.+..++.++..+-.
T Consensus       129 ~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~  201 (233)
T PF05368_consen  129 YLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN  201 (233)
T ss_dssp             HHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE
T ss_pred             hhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC
Confidence            4433       38999999999886543221111    0000   000000001123 3889999999999988665557


Q ss_pred             ceEEeeCCC
Q 024839          239 GHDLVVDGG  247 (262)
Q Consensus       239 G~~i~~dgG  247 (262)
                      |..+.+.|.
T Consensus       202 ~~~~~~~~~  210 (233)
T PF05368_consen  202 GKTIFLAGE  210 (233)
T ss_dssp             EEEEEEGGG
T ss_pred             CEEEEeCCC
Confidence            888888663

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.93  E-value=1.5e-07  Score=84.31  Aligned_cols=239  Identities=15%  Similarity=0.096  Sum_probs=148.3

Q ss_pred             CCCCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhh----CC--CceEEEEecCCCHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI----GP--EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         5 ~~~~k~~lItG~s-~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~----~~--~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      +..++.+||||++ +.||.+++.+|++.|++|+++..+. ++-.+.++.+    ..  ..+.+++++.++..+++.+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4678999999999 6799999999999999999875543 3333444444    11  4567888999999999999999


Q ss_pred             HHHHhC--------------CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEe
Q 024839           77 AIEKYG--------------SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICT  142 (262)
Q Consensus        77 ~~~~~~--------------~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~i  142 (262)
                      |-++..              .+|.+|--|++. ..+.+.+.... -+..+++-+.+...++-.+.++-.+++...|.-++
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVV  550 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-VSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVV  550 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCC-ccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEE
Confidence            975432              267888888765 33455444321 22233444444445555444443333323333222


Q ss_pred             cCCCccCC-CCCCccchhhhHHHHHHHHHHHHHH--CCCCcEEEEEeCCCccC-CCCCCCccchHhHHHhhhcccCCCCC
Q 024839          143 TSTASTVG-GSGPHAYTISKHGLLGLVRSAASEL--GKHGIRVNCVSPFGVAT-PFSAGTINDVEGFVCKVANLKGIVLK  218 (262)
Q Consensus       143 sS~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~pG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
                      --.....+ +.+-..|+-+|++++.+..-+..|-  +. -+.+.....|++.. .+...+ +-......+   ..-+..+
T Consensus       551 LPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~N-diiv~aiEk---~GV~tyS  625 (866)
T COG4982         551 LPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGHN-DIIVAAIEK---AGVRTYS  625 (866)
T ss_pred             ecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCCc-chhHHHHHH---hCceecC
Confidence            22222222 3455689999999999988776653  33 25666677788864 333322 222222222   2244569


Q ss_pred             HHHHHHHHHHHcCCCCCce-ec--eEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYV-SG--HDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i-~G--~~i~~dgG~~~  250 (262)
                      ++|++..++-||+.+..-. ..  -...++||...
T Consensus       626 ~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         626 TDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             HHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            9999999999998763311 12  33567788654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.90  E-value=1e-08  Score=90.17  Aligned_cols=79  Identities=24%  Similarity=0.251  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH
Q 024839            4 PRLQGKVAIIMGA----------------ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE   67 (262)
Q Consensus         4 ~~~~~k~~lItG~----------------s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~   67 (262)
                      .+++||++|||||                ||++|+++|++|+++|++|++++++.+ ..     .. .  ....+|+++.
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~-~--~~~~~dv~~~  254 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TP-A--GVKRIDVESA  254 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CC-C--CcEEEccCCH
Confidence            3578999999999                455999999999999999999988752 11     11 1  1356899998


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCC
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~   94 (262)
                      +++.+.++   +.++++|++|||||+.
T Consensus       255 ~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        255 QEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHHHH---HhcCCCCEEEEccccc
Confidence            88766655   5578899999999985

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.87  E-value=7.2e-08  Score=79.02  Aligned_cols=209  Identities=18%  Similarity=0.189  Sum_probs=139.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +..|-++-|.||+|.+|+-++.+|++.|.+|++-.|..+..-.-.+..++ +++.+++.|+.|++||+++++       .
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------~  130 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------H  130 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------h
Confidence            35677899999999999999999999999999999987754444444444 689999999999999999998       5


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      -++|||..|.-...+.+   +.      -++|+.++-.+.+.+    ++.+ -.++|.+|+..+..-  ..+-|=-+|++
T Consensus       131 sNVVINLIGrd~eTknf---~f------~Dvn~~~aerlAric----ke~G-VerfIhvS~Lganv~--s~Sr~LrsK~~  194 (391)
T KOG2865|consen  131 SNVVINLIGRDYETKNF---SF------EDVNVHIAERLARIC----KEAG-VERFIHVSCLGANVK--SPSRMLRSKAA  194 (391)
T ss_pred             CcEEEEeeccccccCCc---cc------ccccchHHHHHHHHH----HhhC-hhheeehhhcccccc--ChHHHHHhhhh
Confidence            69999999864333332   22      245666655555433    3334 569999999886532  23345566766


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh---------cccCCCCCHHHHHHHHHHHcCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA---------NLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      -+--++   .++.    ....|.|.-+.+.. ..+.+.....+.+..         ...+..+.+-|||+++...+.+++
T Consensus       195 gE~aVr---dafP----eAtIirPa~iyG~e-Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~  266 (391)
T KOG2865|consen  195 GEEAVR---DAFP----EATIIRPADIYGTE-DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD  266 (391)
T ss_pred             hHHHHH---hhCC----cceeechhhhcccc-hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc
Confidence            655443   3332    34567787776542 112222222222211         122446677899999999997764


Q ss_pred             CceeceEEeeCC
Q 024839          235 AYVSGHDLVVDG  246 (262)
Q Consensus       235 ~~i~G~~i~~dg  246 (262)
                      .  .|.++..-|
T Consensus       267 s--~Gktye~vG  276 (391)
T KOG2865|consen  267 S--MGKTYEFVG  276 (391)
T ss_pred             c--cCceeeecC
Confidence            3  588777654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.82  E-value=3e-07  Score=76.99  Aligned_cols=195  Identities=17%  Similarity=0.117  Sum_probs=124.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|||||+|.+|++++++|.++|++|.+..|+.+......     ..+.+...|+.++.++...++       .+|.++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~   68 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVAGAK-------GVDGVL   68 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHHHhc-------cccEEE
Confidence            36999999999999999999999999999999988876654     468899999999999988887       788888


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      +..+... ...          ........+.....+...     .+ ..+++.+|...+..  .....|..+|...+...
T Consensus        69 ~i~~~~~-~~~----------~~~~~~~~~~~~~a~~a~-----~~-~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l  129 (275)
T COG0702          69 LISGLLD-GSD----------AFRAVQVTAVVRAAEAAG-----AG-VKHGVSLSVLGADA--ASPSALARAKAAVEAAL  129 (275)
T ss_pred             EEecccc-ccc----------chhHHHHHHHHHHHHHhc-----CC-ceEEEEeccCCCCC--CCccHHHHHHHHHHHHH
Confidence            8877542 111          011111222233333222     11 35677777666544  24467888999888777


Q ss_pred             HHHHHHHCCCCcEEEEEe-CCCccCCCCCCCccchHhHHHh----hhccc--CCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          169 RSAASELGKHGIRVNCVS-PFGVATPFSAGTINDVEGFVCK----VANLK--GIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~-pG~v~t~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++.       |+.-..+. ++++...... .   .......    ...+.  -..+..+|++..+...+..+.  ..|++
T Consensus       130 ~~s-------g~~~t~lr~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~  196 (275)
T COG0702         130 RSS-------GIPYTTLRRAAFYLGAGAA-F---IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRT  196 (275)
T ss_pred             Hhc-------CCCeEEEecCeeeeccchh-H---HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcE
Confidence            644       66655555 3443322111 1   0011100    00111  236788999999988887654  45676


Q ss_pred             EeeCCC
Q 024839          242 LVVDGG  247 (262)
Q Consensus       242 i~~dgG  247 (262)
                      +.+.|-
T Consensus       197 ~~l~g~  202 (275)
T COG0702         197 YELAGP  202 (275)
T ss_pred             EEccCC
Confidence            766654

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.77  E-value=4.4e-08  Score=82.96  Aligned_cols=81  Identities=27%  Similarity=0.364  Sum_probs=63.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCc---hhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQD---ELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~---~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ++++|+++|+|+ ||+|++++..|++.|+. |++++|+.   ++.+++.+++..  ..+.+..+|+.+.+++++.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999986 99999987   566666666532  244566789888777665544   


Q ss_pred             HHhCCcCEEEeCCcC
Q 024839           79 EKYGSLDIMYSNAGV   93 (262)
Q Consensus        79 ~~~~~~d~li~~ag~   93 (262)
                          ..|+||||.-.
T Consensus       199 ----~~DilINaTp~  209 (289)
T PRK12548        199 ----SSDILVNATLV  209 (289)
T ss_pred             ----cCCEEEEeCCC
Confidence                56999998754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.77  E-value=6.1e-07  Score=69.06  Aligned_cols=187  Identities=13%  Similarity=0.028  Sum_probs=120.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++.|+||||..|..|++...++|++|+.+.|+..+..+.      ..+..++.|+.|++++.+.+.       ..|+||.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~~l~-------g~DaVIs   68 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLASDLA-------GHDAVIS   68 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHhhhc-------CCceEEE
Confidence            588999999999999999999999999999999887553      346789999999988866665       7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--------CCC-ccc-hh
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--------SGP-HAY-TI  159 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------~~~-~~Y-~~  159 (262)
                      .-+...+       +.++  .        .....++++..++..+ ..|+++++...+..-.        |.. ..| ..
T Consensus        69 A~~~~~~-------~~~~--~--------~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~  130 (211)
T COG2910          69 AFGAGAS-------DNDE--L--------HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE  130 (211)
T ss_pred             eccCCCC-------ChhH--H--------HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHHHH
Confidence            9876521       1111  1        1112555666665555 7899999887765321        111 233 33


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh--cccCCCCCHHHHHHHHHHHcCCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA--NLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +++ .--+...|..+   ..+.-.-++|..+..|-.+..  ....-.....  ......++.+|.|-+++--+..+
T Consensus       131 A~~-~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg--~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~  200 (211)
T COG2910         131 ALA-QAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTG--NYRLGGDQLLVNAKGESRISYADYAIAVLDELEKP  200 (211)
T ss_pred             HHH-HHHHHHHHhhc---cCcceEEeCcHHhcCCccccC--ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcc
Confidence            343 33344455554   457888899987777632221  1100000000  01124678899998888877544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.74  E-value=8.5e-08  Score=78.39  Aligned_cols=99  Identities=14%  Similarity=0.147  Sum_probs=67.2

Q ss_pred             EEEEecCCCh-HHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASG-IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~g-iG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +-.||+.|+| ||+++|++|+++|++|++++|.....     ......+.++.++  +   .++..+.+.+..+.+|++|
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~~~~~~v~~i~v~--s---~~~m~~~l~~~~~~~DivI   86 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----PEPHPNLSIIEIE--N---VDDLLETLEPLVKDHDVLI   86 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----CCCCCCeEEEEEe--c---HHHHHHHHHHHhcCCCEEE
Confidence            4556766665 99999999999999999988764211     1011245555542  2   2333344444456799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGS  119 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~  119 (262)
                      ||||+. ...+....+.++|.+++++|.+..
T Consensus        87 h~AAvs-d~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         87 HSMAVS-DYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             eCCccC-Cceehhhhhhhhhhhhhhhhhhhc
Confidence            999986 445666677889999988876554

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.72  E-value=1.5e-07  Score=75.10  Aligned_cols=82  Identities=20%  Similarity=0.374  Sum_probs=66.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++++++|+||+|++|+++++.|++.|++|++++|+.++.+++.+.+.. .......+|..+.+++.+.++       +
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            57899999999999999999999999999999999998888777766532 234456678888888777665       5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+||++...
T Consensus        98 ~diVi~at~~  107 (194)
T cd01078          98 ADVVFAAGAA  107 (194)
T ss_pred             CCEEEECCCC
Confidence            7999887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.70  E-value=5.1e-07  Score=71.72  Aligned_cols=199  Identities=13%  Similarity=0.135  Sum_probs=122.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++++|||++|=.|++|.+.+.++|.   +.++.+                   --.+|+++..+.+.+++..     ++-
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------skd~DLt~~a~t~~lF~~e-----kPt   57 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------SKDADLTNLADTRALFESE-----KPT   57 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------cccccccchHHHHHHHhcc-----CCc
Confidence            6899999999999999999999875   222221                   1237999999999999865     789


Q ss_pred             EEEeCCcCCCCCCCcCC--CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC--------------
Q 024839           86 IMYSNAGVAGPVGTILD--LDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV--------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~--------------  149 (262)
                      .|||.|+..+  +.+..  ...+-|...+.+|    -.+++.+..+    + ...+++..|.+-+.              
T Consensus        58 hVIhlAAmVG--Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~----g-v~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   58 HVIHLAAMVG--GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEH----G-VKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             eeeehHhhhc--chhhcCCCchHHHhhcceec----hhHHHHHHHh----c-hhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            9999988653  33333  2334444443333    3333333332    1 22444444444221              


Q ss_pred             --CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC------ccchHhH-------------HHh
Q 024839          150 --GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT------INDVEGF-------------VCK  208 (262)
Q Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~------~~~~~~~-------------~~~  208 (262)
                        +.+..-.|+-+|..+.-..+++..++   |-...++.|-.+.+|--.-.      .+.....             ...
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG  203 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG  203 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec
Confidence              12334469999988888889999886   44556666666655531111      1111110             111


Q ss_pred             hhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          209 VANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       209 ~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ...|.+.++..+|+|++..|++.+-...   +.|.+.-|.
T Consensus       204 sG~PlRqFiys~DLA~l~i~vlr~Y~~v---Epiils~ge  240 (315)
T KOG1431|consen  204 SGSPLRQFIYSDDLADLFIWVLREYEGV---EPIILSVGE  240 (315)
T ss_pred             CCChHHHHhhHhHHHHHHHHHHHhhcCc---cceEeccCc
Confidence            2247788889999999999999765442   556555554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.69  E-value=9.1e-08  Score=83.90  Aligned_cols=82  Identities=26%  Similarity=0.265  Sum_probs=62.7

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHH
Q 024839            5 RLQGKVAIIMGA---------------ASG-IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK   68 (262)
Q Consensus         5 ~~~~k~~lItG~---------------s~g-iG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   68 (262)
                      +++||++|||||               ||| +|.++|++|..+|++|+++.+.....      .. .  ....+|+++.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~-~--~~~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TP-P--GVKSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CC-C--CcEEEEeccHH
Confidence            578999999999               666 99999999999999999987665321      11 1  23568999998


Q ss_pred             HH-HHHHHHHHHHhCCcCEEEeCCcCCCCCCC
Q 024839           69 QV-EETVAYAIEKYGSLDIMYSNAGVAGPVGT   99 (262)
Q Consensus        69 ~i-~~~~~~~~~~~~~~d~li~~ag~~~~~~~   99 (262)
                      ++ ++++++.   .+++|++|+|||+. ...+
T Consensus       253 ~~~~~~~~~~---~~~~D~~i~~Aavs-d~~~  280 (390)
T TIGR00521       253 EMLEAALNEL---AKDFDIFISAAAVA-DFKP  280 (390)
T ss_pred             HHHHHHHHhh---cccCCEEEEccccc-cccc
Confidence            88 6565443   46799999999986 4343

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.60  E-value=2.2e-07  Score=88.50  Aligned_cols=162  Identities=14%  Similarity=0.189  Sum_probs=123.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhH----HHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELG----NQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~----~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..|..+|+||-+|.|.++|.+|.++|++ +++++|+--+.    ......-.. .++.+-..|++..+..++++++. .+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hh
Confidence            3688999999999999999999999997 67788774321    111111111 23444445777777777877755 34


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      .+++-.++|.|.+. ....+++.+++.|++.-+..+.++.++-+.-....-   .-.-+|.+||...-.+..+...|+-+
T Consensus      1846 l~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~---~LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP---ELDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             cccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc---ccceEEEEEeecccCCCCcccccchh
Confidence            57899999999998 557889999999999999999999988775544432   14578999999888888889999999


Q ss_pred             hHHHHHHHHHHHH
Q 024839          161 KHGLLGLVRSAAS  173 (262)
Q Consensus       161 K~a~~~~~~~la~  173 (262)
                      ..+++.++..-..
T Consensus      1922 NS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1922 NSAMERICEQRRH 1934 (2376)
T ss_pred             hHHHHHHHHHhhh
Confidence            9999999975433

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.55  E-value=6.8e-08  Score=77.58  Aligned_cols=215  Identities=14%  Similarity=0.031  Sum_probs=134.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH--HhhhC------CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV--VSSIG------PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~--~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .|++||||-++-=|+-++..|+.+||.|..+-|+.......  .....      ....+.+-.|++|..++.++++.+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            45899999999999999999999999999776654433321  11111      146678889999999999999988  


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC--c---------c
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA--S---------T  148 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~--~---------~  148 (262)
                         +++=++|.|+.++..-+     .+--+-..++...|.+.++.+...+-...  +-++---|+..  +         .
T Consensus       106 ---kPtEiYnLaAQSHVkvS-----FdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQsE~  175 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVS-----FDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQSET  175 (376)
T ss_pred             ---CchhhhhhhhhcceEEE-----eecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCCCcccC
Confidence               78889999987754222     22223344566678888887766553322  12333333321  1         1


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCC---CCcEEEEEeCCCccCCCCCCCccchHh--------HHHhhhcccCCCC
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGK---HGIRVNCVSPFGVATPFSAGTINDVEG--------FVCKVANLKGIVL  217 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~  217 (262)
                      .|+.+.++|+++|.+.-.++-.+...|.-   .||-+|.-+|--=++-.++........        +........+...
T Consensus       176 TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWG  255 (376)
T KOG1372|consen  176 TPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWG  255 (376)
T ss_pred             CCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccc
Confidence            23456789999999877776666555433   477888777754333222222111111        0111111224566


Q ss_pred             CHHHHHHHHHHHcCCCC
Q 024839          218 KAKHVAEAALFLASDES  234 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~  234 (262)
                      .+.|-+++.+..+..+.
T Consensus       256 hA~dYVEAMW~mLQ~d~  272 (376)
T KOG1372|consen  256 HAGDYVEAMWLMLQQDS  272 (376)
T ss_pred             hhHHHHHHHHHHHhcCC
Confidence            77888888888886553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.50  E-value=2.8e-06  Score=75.27  Aligned_cols=169  Identities=12%  Similarity=0.170  Sum_probs=110.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC---CeEEEeeCCch---hHHHHH--------hhh----CC--CceEEEEecCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG---AFVIIADIQDE---LGNQVV--------SSI----GP--EKASYRHCDVR   65 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g---~~V~~~~r~~~---~~~~~~--------~~~----~~--~~~~~~~~D~~   65 (262)
                      ++||+++||||+|++|+-+.+.|+..-   .++++.-|...   ..+.+.        +.+    .+  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            579999999999999999999998753   26777655421   111111        111    11  47778888887


Q ss_pred             CH------HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEE
Q 024839           66 DE------KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSI  139 (262)
Q Consensus        66 ~~------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~i  139 (262)
                      ++      .+.+.+.+       .+|+|||+|+...        -.|.++..+.+|++|+..+++.+.. |.+   -..+
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvr--------Fde~l~~al~iNt~Gt~~~l~lak~-~~~---l~~~  150 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVR--------FDEPLDVALGINTRGTRNVLQLAKE-MVK---LKAL  150 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeec--------cchhhhhhhhhhhHhHHHHHHHHHH-hhh---hheE
Confidence            54      33333333       7999999999753        2355788899999999999985544 432   3478


Q ss_pred             EEecCCCccCC----------CC------------------------------CCccchhhhHHHHHHHHHHHHHHCCCC
Q 024839          140 ICTTSTASTVG----------GS------------------------------GPHAYTISKHGLLGLVRSAASELGKHG  179 (262)
Q Consensus       140 i~isS~~~~~~----------~~------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~g  179 (262)
                      +.+|+......          .+                              ..-.|.-+|+-.+++...-     +.+
T Consensus       151 vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~  225 (467)
T KOG1221|consen  151 VHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AEN  225 (467)
T ss_pred             EEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccC
Confidence            88888665411          00                              1123666666666665432     246


Q ss_pred             cEEEEEeCCCccCCCCCCC
Q 024839          180 IRVNCVSPFGVATPFSAGT  198 (262)
Q Consensus       180 i~v~~i~pG~v~t~~~~~~  198 (262)
                      +.+..++|..|.+......
T Consensus       226 lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  226 LPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             CCeEEEcCCceeccccCCC
Confidence            8999999998877654443

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.49  E-value=4.1e-06  Score=73.14  Aligned_cols=210  Identities=14%  Similarity=0.113  Sum_probs=121.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh-hhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-C
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS-SIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-S   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~   83 (262)
                      .+..+|+|+||+|++|+-+++.|.++|+.|..+-|+.++.+.... ...+.....+..|...+.++...+-   +..+ .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~---~~~~~~  153 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLV---EAVPKG  153 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhh---hhcccc
Confidence            456789999999999999999999999999999999887776655 2233445556666665544433222   1111 2


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      ..+++-++|.-+...        +...-..+-..|...+++++.    ..+ -.++++++|+.+.........+..  ..
T Consensus       154 ~~~v~~~~ggrp~~e--------d~~~p~~VD~~g~knlvdA~~----~aG-vk~~vlv~si~~~~~~~~~~~~~~--~~  218 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE--------DIVTPEKVDYEGTKNLVDACK----KAG-VKRVVLVGSIGGTKFNQPPNILLL--NG  218 (411)
T ss_pred             ceeEEecccCCCCcc--------cCCCcceecHHHHHHHHHHHH----HhC-CceEEEEEeecCcccCCCchhhhh--hh
Confidence            456666666432211        112222334456666666652    234 569999999887665443333331  11


Q ss_pred             HHHHH-HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCC--CCCHHHHHHHHHHHcCCCC
Q 024839          164 LLGLV-RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI--VLKAKHVAEAALFLASDES  234 (262)
Q Consensus       164 ~~~~~-~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l~~~~~  234 (262)
                      ...-. +....++...|+.-..|+||..................... .-..+  .++-.++++.++.++-.++
T Consensus       219 ~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~r~~vael~~~all~~~  291 (411)
T KOG1203|consen  219 LVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELL-TVDGGAYSISRLDVAELVAKALLNEA  291 (411)
T ss_pred             hhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccc-cccccceeeehhhHHHHHHHHHhhhh
Confidence            11111 23344555679999999999887654322211111111110 01122  5567788888888776554

>PLN00106 malate dehydrogenase

Probab=98.48  E-value=2.4e-06  Score=73.21  Aligned_cols=152  Identities=13%  Similarity=0.139  Sum_probs=94.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ..++++|||++|.+|..++..|+.++.  +++++++......  ...+.+........++++.+++.+.++       ..
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~--a~Dl~~~~~~~~i~~~~~~~d~~~~l~-------~a   87 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV--AADVSHINTPAQVRGFLGDDQLGDALK-------GA   87 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee--EchhhhCCcCceEEEEeCCCCHHHHcC-------CC
Confidence            356899999999999999999997764  7999998772221  112222111222334433333444333       68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc----c--------CCCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS----T--------VGGS  152 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~----~--------~~~~  152 (262)
                      |+||+.||....  +  ..   .+.+.+..|+.....+.+    .+.+...++.++++|-...    .        .+.+
T Consensus        88 DiVVitAG~~~~--~--g~---~R~dll~~N~~i~~~i~~----~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p  156 (323)
T PLN00106         88 DLVIIPAGVPRK--P--GM---TRDDLFNINAGIVKTLCE----AVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYD  156 (323)
T ss_pred             CEEEEeCCCCCC--C--CC---CHHHHHHHHHHHHHHHHH----HHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCC
Confidence            999999997522  1  23   356677777666544444    4444442444444444332    1        2345


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKH  178 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~  178 (262)
                      ....|+.++.-...|...++..+.-.
T Consensus       157 ~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        157 PKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             cceEEEEecchHHHHHHHHHHHhCCC
Confidence            56789999988888999999987543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.45  E-value=1.3e-06  Score=76.08  Aligned_cols=77  Identities=25%  Similarity=0.361  Sum_probs=67.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +.+||.|+ |+||+.+|..|++.| .+|++++|+.++.+++.+... .++.++++|+.+.+.+.++++       ..|++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-~~v~~~~vD~~d~~al~~li~-------~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-GKVEALQVDAADVDALVALIK-------DFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc-ccceeEEecccChHHHHHHHh-------cCCEE
Confidence            46999998 999999999999999 899999999999888766654 379999999999999988888       45999


Q ss_pred             EeCCcCC
Q 024839           88 YSNAGVA   94 (262)
Q Consensus        88 i~~ag~~   94 (262)
                      ||++...
T Consensus        73 In~~p~~   79 (389)
T COG1748          73 INAAPPF   79 (389)
T ss_pred             EEeCCch
Confidence            9998764

>PRK09620 hypothetical protein; Provisional

Probab=98.39  E-value=7.4e-07  Score=72.72  Aligned_cols=82  Identities=17%  Similarity=0.199  Sum_probs=50.8

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH
Q 024839            6 LQGKVAIIMGAA----------------SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ   69 (262)
Q Consensus         6 ~~~k~~lItG~s----------------~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   69 (262)
                      |+||+||||+|.                |.+|.++|++|.++|++|+++++.......   ... .......  +....+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~--V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHP--FEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEE--EecHHH
Confidence            469999999986                999999999999999999988764321110   001 1122222  222222


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~   94 (262)
                      +...+.++.+. .++|++||+|++.
T Consensus        75 ~~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         75 LQDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHHhcc-cCCCEEEECcccc
Confidence            22223322211 2689999999985

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.37  E-value=9.2e-06  Score=69.58  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=95.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+.++++|+|++|.||..++..|+.++  .+++++++.....+  ...+.+........+.+++.++.+.++       .
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~--a~Dl~~~~~~~~v~~~td~~~~~~~l~-------g   76 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV--AADLSHIDTPAKVTGYADGELWEKALR-------G   76 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc--ccchhhcCcCceEEEecCCCchHHHhC-------C
Confidence            467799999999999999999999665  67999999322221  112222111223345555444333333       6


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-------------cCC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-------------TVG  150 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-------------~~~  150 (262)
                      .|+||+++|...  .+  .   +.+.+.+..|+...-.+.+.    |++.+ ..++|+++|...             ..+
T Consensus        77 aDvVVitaG~~~--~~--~---~tR~dll~~N~~i~~~i~~~----i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg  144 (321)
T PTZ00325         77 ADLVLICAGVPR--KP--G---MTRDDLFNTNAPIVRDLVAA----VASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGV  144 (321)
T ss_pred             CCEEEECCCCCC--CC--C---CCHHHHHHHHHHHHHHHHHH----HHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccC
Confidence            899999999742  11  1   23566788887665555554    44444 456666666432             123


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCc
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV  190 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v  190 (262)
                      .+....||.+-.--..|-..++..+   |+....|. ++|
T Consensus       145 ~p~~~viG~g~LDs~R~r~~la~~l---~v~~~~V~-~~V  180 (321)
T PTZ00325        145 YDPRKLFGVTTLDVVRARKFVAEAL---GMNPYDVN-VPV  180 (321)
T ss_pred             CChhheeechhHHHHHHHHHHHHHh---CcChhheE-EEE
Confidence            4556688887433345666777775   44444444 344

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.36  E-value=2.3e-06  Score=75.60  Aligned_cols=76  Identities=25%  Similarity=0.410  Sum_probs=61.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           11 AIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |+|.|+ |.+|+.+++.|++.+-  +|++++|+.++++++.+.+...++.++++|+.|.+++.++++       +.|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999999873  799999999999988887666789999999999999988887       569999


Q ss_pred             eCCcCC
Q 024839           89 SNAGVA   94 (262)
Q Consensus        89 ~~ag~~   94 (262)
                      |+++..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.34  E-value=4.4e-06  Score=62.60  Aligned_cols=77  Identities=23%  Similarity=0.321  Sum_probs=60.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|.|+ ||.|++++..|.+.|+. |+++.|+.++.+++.+.+....+.++..  .+..   +...       +
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~--~~~~---~~~~-------~   75 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL--EDLE---EALQ-------E   75 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG--GGHC---HHHH-------T
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH--HHHH---HHHh-------h
Confidence            578999999996 99999999999999987 9999999999999988885444555544  3322   2233       6


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|++|++.+..
T Consensus        76 ~DivI~aT~~~   86 (135)
T PF01488_consen   76 ADIVINATPSG   86 (135)
T ss_dssp             ESEEEE-SSTT
T ss_pred             CCeEEEecCCC
Confidence            89999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.32  E-value=3.8e-06  Score=67.26  Aligned_cols=215  Identities=16%  Similarity=0.192  Sum_probs=131.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+..++||||+-|-+|..+|+.|-.+ |.+ |++.+...+.....      ...-++-.|+-|..++++++-.     .+
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------~~GPyIy~DILD~K~L~eIVVn-----~R  110 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------DVGPYIYLDILDQKSLEEIVVN-----KR  110 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------ccCCchhhhhhccccHHHhhcc-----cc
Confidence            34568999999999999999999765 654 66665544432211      1233667788888777776532     37


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------  151 (262)
                      +|-+||-.+..+.      .......-...+|+.|...+++.+..+      +=++.+=|.+.+..|.            
T Consensus       111 IdWL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  111 IDWLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             cceeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCCCeeee
Confidence            9999998775532      222233445678999988888866543      3344444555555443            


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEe-CCCccCCC-CCCCccchHhHHHhhh---------cccCC--CCC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS-PFGVATPF-SAGTINDVEGFVCKVA---------NLKGI--VLK  218 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~-pG~v~t~~-~~~~~~~~~~~~~~~~---------~~~~~--~~~  218 (262)
                      .....|+.||.-.+.+...+...   +|+.+.+++ ||.+...- ..+...-....+....         .|--|  ++.
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy  255 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMY  255 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhh---cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceee
Confidence            13357999999999999887766   466666664 55554321 1111111111111110         11111  456


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      .+|+-..+..++..++..+--.+++|+|
T Consensus       256 ~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  256 DTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             hHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            6888888887777666666666777774

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.28  E-value=3.4e-06  Score=76.10  Aligned_cols=77  Identities=25%  Similarity=0.382  Sum_probs=58.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+++ +|.++|+.|+++|++|+++++.. +..++..+++....+.++..|..+            +..++
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhc
Confidence            57899999999887 99999999999999999999875 334443444433346677777765            12347


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      +|+||+++|..
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            99999999874

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.20  E-value=6.3e-06  Score=70.85  Aligned_cols=73  Identities=22%  Similarity=0.325  Sum_probs=55.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-C-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH-G-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.+|+++||||+|.||+.++++|+++ | .+++++.|+.+++..+.+++..       .|+.   +++       +...
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-------~~i~---~l~-------~~l~  214 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-------GKIL---SLE-------EALP  214 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-------ccHH---hHH-------HHHc
Confidence            578999999999999999999999865 5 5899999998887776655432       1221   222       2334


Q ss_pred             CcCEEEeCCcCC
Q 024839           83 SLDIMYSNAGVA   94 (262)
Q Consensus        83 ~~d~li~~ag~~   94 (262)
                      ..|+||+.++..
T Consensus       215 ~aDiVv~~ts~~  226 (340)
T PRK14982        215 EADIVVWVASMP  226 (340)
T ss_pred             cCCEEEECCcCC
Confidence            689999999864

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.04  E-value=2.6e-05  Score=67.15  Aligned_cols=116  Identities=14%  Similarity=0.129  Sum_probs=67.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CeEEEeeCCchh--HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG-------AFVIIADIQDEL--GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++|||++|.+|.+++..|+..+       .+|++.++....  +......+.+... ....|+....++.+       .
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~-~~~~~~~~~~~~~~-------~   75 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAF-PLLKSVVATTDPEE-------A   75 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccc-cccCCceecCCHHH-------H
Confidence            69999999999999999998844       589999986532  2111111111000 11113322222222       3


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS  144 (262)
                      +...|+|||.||....    ...++   .+.++.|+    .+++...+.+.+.. .++.+|++|.
T Consensus        76 l~~aDiVI~tAG~~~~----~~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          76 FKDVDVAILVGAMPRK----EGMER---KDLLKANV----KIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             hCCCCEEEEeCCcCCC----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecC
Confidence            3479999999997522    12344   44555554    44555555555542 3667777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.96  E-value=2.7e-05  Score=66.00  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=67.1

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAE----HGAFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      -++|-||||..|.-+++++.+    .+....+.+|+++++++.++....      ....++.||.+|+++++++++    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            389999999999999999999    788999999999999988877643      233488999999999999998    


Q ss_pred             HhCCcCEEEeCCcCC
Q 024839           80 KYGSLDIMYSNAGVA   94 (262)
Q Consensus        80 ~~~~~d~li~~ag~~   94 (262)
                         +-.+|+|++|..
T Consensus        83 ---~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ---QARVIVNCVGPY   94 (423)
T ss_pred             ---hhEEEEeccccc
Confidence               458899999864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.80  E-value=0.00049  Score=73.18  Aligned_cols=177  Identities=15%  Similarity=0.132  Sum_probs=114.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.++.++|++.+++++.+++.+|.++|++|+++....... .....+. ..+..+.+.-.+.+++..+++.+....++++
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1830 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVS-HSASPLA-SAIASVTLGTIDDTSIEAVIKDIEEKTAQID 1830 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccccc-ccccccc-cccccccccccchHHHHHHHHhhhccccccc
Confidence            3477888888899999999999999999998774332110 0000011 1233455666677888888888888888999


Q ss_pred             EEEeCCcCCCCC-CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc-------
Q 024839           86 IMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY-------  157 (262)
Q Consensus        86 ~li~~ag~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y-------  157 (262)
                      .+||..+..... ......   ...+.-...+...|.+.|.+.+.+...+ .+.++.++...+..+.......       
T Consensus      1831 g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g~~~~~~~~~~~~~~ 1906 (2582)
T TIGR02813      1831 GFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFGYSNGDADSGTQQVK 1906 (2582)
T ss_pred             eEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccccCCccccccccccc
Confidence            999987754210 011111   1111122334455677776666554444 6789999888776665332221       


Q ss_pred             -hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC
Q 024839          158 -TISKHGLLGLVRSAASELGKHGIRVNCVSPF  188 (262)
Q Consensus       158 -~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG  188 (262)
                       ....+++.+|+|+++.||....+|...+.|.
T Consensus      1907 ~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1907 AELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence             2358899999999999998766777777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.79  E-value=0.00052  Score=58.37  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|++++|+|+++++|.+++..+...|.+|+++.++.++.+.+. .++..    ..+|..+.+..+.+.+...  ...+|+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~----~~~~~~~~~~~~~~~~~~~--~~~~d~  216 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGAD----AVFNYRAEDLADRILAATA--GQGVDV  216 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC----EEEeCCCcCHHHHHHHHcC--CCceEE
Confidence            5889999999999999999999999999999988877665553 33311    2245455444444332221  136999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++++++
T Consensus       217 vi~~~~  222 (325)
T cd08253         217 IIEVLA  222 (325)
T ss_pred             EEECCc
Confidence            999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.78  E-value=0.00015  Score=55.36  Aligned_cols=76  Identities=25%  Similarity=0.347  Sum_probs=55.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++++++|+|+ +++|.++++.|.+.| ++|++++|+.+..++..+++....   +..+..+.++.          ...
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~   81 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG---IAIAYLDLEEL----------LAE   81 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc---cceeecchhhc----------ccc
Confidence            356899999997 899999999999996 789999999888777766654211   22334443322          237


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+||++....
T Consensus        82 ~Dvvi~~~~~~   92 (155)
T cd01065          82 ADLIINTTPVG   92 (155)
T ss_pred             CCEEEeCcCCC
Confidence            89999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.73  E-value=0.00026  Score=60.87  Aligned_cols=148  Identities=9%  Similarity=0.015  Sum_probs=93.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCchh--HHHHHhhhCCCc-eE--EEEecCCCHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDEL--GNQVVSSIGPEK-AS--YRHCDVRDEKQVEETVA   75 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~--~~~~D~~~~~~i~~~~~   75 (262)
                      -+++.|+|++|.+|.+++..|+..|.       ++++++..+..  ++.....+.+.. ..  -+...-.+         
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~---------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDP---------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCc---------
Confidence            35899999999999999999998874       79999986433  332222222211 00  00111111         


Q ss_pred             HHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCc-------
Q 024839           76 YAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTAS-------  147 (262)
Q Consensus        76 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~-------  147 (262)
                        .+....-|++|..||..  .++  ..++.+   .+..|    .-+++.+.+.+.+.. ..+.+|++|--..       
T Consensus        73 --~~~~~daDivvitaG~~--~k~--g~tR~d---ll~~N----~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~  139 (322)
T cd01338          73 --NVAFKDADWALLVGAKP--RGP--GMERAD---LLKAN----GKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM  139 (322)
T ss_pred             --HHHhCCCCEEEEeCCCC--CCC--CCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH
Confidence              12223689999999974  222  345443   34444    456666777776654 2677887764331       


Q ss_pred             -cC-CCCCCccchhhhHHHHHHHHHHHHHHCC
Q 024839          148 -TV-GGSGPHAYTISKHGLLGLVRSAASELGK  177 (262)
Q Consensus       148 -~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~  177 (262)
                       .. ..+....|+.++..-..|...+++.+.-
T Consensus       140 k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         140 KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence             12 2556678999999999999999998753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.73  E-value=0.00014  Score=61.44  Aligned_cols=75  Identities=21%  Similarity=0.359  Sum_probs=54.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+|+++|+|+ ||+|++++..|.+.| .+|++++|+.++.+++.+.+....  .+..++    +..       +....
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~~~----~~~-------~~~~~  185 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAELDL----ELQ-------EELAD  185 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceeecc----cch-------hcccc
Confidence            567899999996 899999999999999 789999999988888777664211  011111    111       11236


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       186 ~DivInaTp~  195 (278)
T PRK00258        186 FDLIINATSA  195 (278)
T ss_pred             CCEEEECCcC
Confidence            8999999764

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.72  E-value=0.00016  Score=56.95  Aligned_cols=77  Identities=27%  Similarity=0.293  Sum_probs=47.7

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH
Q 024839            6 LQGKVAIIMGAA----------------SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ   69 (262)
Q Consensus         6 ~~~k~~lItG~s----------------~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   69 (262)
                      ++||+||||+|.                |..|.++|+.+..+|++|+++..... ...      ...+..  .++.+.++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~------p~~~~~--i~v~sa~e   71 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP------PPGVKV--IRVESAEE   71 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEE--EE-SSHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc------cccceE--EEecchhh
Confidence            579999999874                57899999999999999998876632 110      123333  34556555


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~   94 (262)
                      +.+.+.   +....-|++|++|++.
T Consensus        72 m~~~~~---~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   72 MLEAVK---ELLPSADIIIMAAAVS   93 (185)
T ss_dssp             HHHHHH---HHGGGGSEEEE-SB--
T ss_pred             hhhhhc---cccCcceeEEEecchh
Confidence            544444   4445569999999986

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.70  E-value=0.00012  Score=65.93  Aligned_cols=78  Identities=24%  Similarity=0.290  Sum_probs=51.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++|||+++ +|.++|+.|++.|++|++.++.........+.+....+.+...+  +..++   .+      ..+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~~   69 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------EDF   69 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------CcC
Confidence            46799999999986 99999999999999999998765433332233322223333221  11111   11      148


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+||+++|+.
T Consensus        70 d~vV~s~gi~   79 (447)
T PRK02472         70 DLMVKNPGIP   79 (447)
T ss_pred             CEEEECCCCC
Confidence            9999999985

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.64  E-value=0.00029  Score=59.14  Aligned_cols=73  Identities=16%  Similarity=0.217  Sum_probs=53.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+.. ........|     +.         .....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~---------~~~~~  179 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----EL---------PLHRV  179 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hh---------cccCc
Confidence            45889999998 6999999999999999999999998888877776643 112221111     10         11368


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |+|||+.+.
T Consensus       180 DivInatp~  188 (270)
T TIGR00507       180 DLIINATSA  188 (270)
T ss_pred             cEEEECCCC
Confidence            999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.62  E-value=0.0011  Score=56.74  Aligned_cols=146  Identities=19%  Similarity=0.154  Sum_probs=76.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHH-c--CCeEEEeeCCchhHHHHHhhhCC-CceEEEEe-cCCCHHHHHHHHHHHHHHhCC
Q 024839            9 KVAIIMGAASGIGEATAKLFAE-H--GAFVIIADIQDELGNQVVSSIGP-EKASYRHC-DVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~-~--g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+||+|++|.+++..|.. .  ++.+++.++++.. ....-.+.+ .....+.. +-.+   +.       +....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~~~~~d---~~-------~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKGFSGED---PT-------PALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEEeCCCC---HH-------HHcCC
Confidence            4689999999999999998855 2  4578888887432 111011111 11112222 1112   11       12236


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc----c--------CCC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS----T--------VGG  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~----~--------~~~  151 (262)
                      .|+||.++|.....    +.++   .+.+..|...    ++.+.+.|.+...++.++++|-...    .        .+.
T Consensus        70 ~DiVIitaG~~~~~----~~~R---~dll~~N~~i----~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~  138 (312)
T PRK05086         70 ADVVLISAGVARKP----GMDR---SDLFNVNAGI----VKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVY  138 (312)
T ss_pred             CCEEEEcCCCCCCC----CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCC
Confidence            99999999975321    2333   4445556544    4444555555442444444443331    1        123


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      +.....+.+-.--..+...++..+.
T Consensus       139 p~~rvig~~~Lds~R~~~~ia~~l~  163 (312)
T PRK05086        139 DKNKLFGVTTLDVIRSETFVAELKG  163 (312)
T ss_pred             CHHHEEeeecHHHHHHHHHHHHHhC
Confidence            3344566654333456667777653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.61  E-value=0.0015  Score=50.43  Aligned_cols=161  Identities=12%  Similarity=0.051  Sum_probs=98.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .|+++.++|.||++-.|..+.+.+.+.+  ..|+++.|+...-.+.     ...+.....|.+..++...       ...
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a~-------~~q   82 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLAT-------NEQ   82 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHHh-------hhc
Confidence            4678889999999999999999999987  3588888874322221     1344455667665444322       334


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      .+|+.+++-|......-.+....-+..        -.+.+.+.+    ++.+ -.+++.+||..+.....  -.|--.|.
T Consensus        83 g~dV~FcaLgTTRgkaGadgfykvDhD--------yvl~~A~~A----Ke~G-ck~fvLvSS~GAd~sSr--FlY~k~KG  147 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKAGADGFYKVDHD--------YVLQLAQAA----KEKG-CKTFVLVSSAGADPSSR--FLYMKMKG  147 (238)
T ss_pred             CCceEEEeecccccccccCceEeechH--------HHHHHHHHH----HhCC-CeEEEEEeccCCCcccc--eeeeeccc
Confidence            799999998865211111111111111        112222221    2233 45899999987765543  35777788


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT  198 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~  198 (262)
                      -++.=...|.-+      ++..++||++..+-....
T Consensus       148 EvE~~v~eL~F~------~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  148 EVERDVIELDFK------HIIILRPGPLLGERTESR  177 (238)
T ss_pred             hhhhhhhhcccc------EEEEecCcceeccccccc
Confidence            777665544333      889999999977654433

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.61  E-value=0.00066  Score=58.47  Aligned_cols=114  Identities=14%  Similarity=0.114  Sum_probs=70.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHH--HH--HHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE--ET--VAYAI   78 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~--~~--~~~~~   78 (262)
                      ++.|+|++|.+|.+++..|+..+.       +++++++.++..          .......|+.+.....  ..  .....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence            478999999999999999998553       589999865431          1223445555543110  00  00123


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-CCCcEEEEecC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-KIRGSIICTTS  144 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~~~~ii~isS  144 (262)
                      +.....|+||+.||....  +  ..   ++.+.+..|    ..+++...+.+.+. +.++.+|++|.
T Consensus        71 ~~~~~aDiVVitAG~~~~--~--~~---tr~~ll~~N----~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        71 VAFTDVDVAILVGAFPRK--E--GM---ERRDLLSKN----VKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HHhCCCCEEEEcCCCCCC--C--CC---cHHHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            344579999999997421  1  22   345666666    44556666666664 33677877774

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd00704 MDH Malate dehydrogenase

Probab=97.56  E-value=0.0008  Score=57.91  Aligned_cols=143  Identities=15%  Similarity=0.105  Sum_probs=83.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHH--H--HHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQV--E--ETVAY   76 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i--~--~~~~~   76 (262)
                      ++.|||++|.+|..++..|+..|.       ++++.++..  +.            ......|+.+....  .  .+...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~------------~~g~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA------------LEGVVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc------------cceeeeehhhhcccccCCcEEecC
Confidence            589999999999999999998652       589999876  32            22344455443100  0  01112


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-CCCcEEEEecCCCcc-------
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-KIRGSIICTTSTAST-------  148 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~~~~ii~isS~~~~-------  148 (262)
                      ..+.....|+||+.||...  .+  ..++.   +.+..|    ..+++.+.+.+.+. +..+.+|++|-....       
T Consensus        70 ~~~~~~~aDiVVitAG~~~--~~--g~tR~---dll~~N----~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k  138 (323)
T cd00704          70 PEEAFKDVDVAILVGAFPR--KP--GMERA---DLLRKN----AKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALK  138 (323)
T ss_pred             hHHHhCCCCEEEEeCCCCC--Cc--CCcHH---HHHHHh----HHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHH
Confidence            2334457899999999742  22  34543   344444    45666677777665 346777777643211       


Q ss_pred             -CCC-CCCccchhhhHHHHHHHHHHHHHH
Q 024839          149 -VGG-SGPHAYTISKHGLLGLVRSAASEL  175 (262)
Q Consensus       149 -~~~-~~~~~Y~~sK~a~~~~~~~la~e~  175 (262)
                       .+. |.....+.+..=-..|-..+++.+
T Consensus       139 ~sg~~p~~~vig~t~LDs~R~r~~la~~l  167 (323)
T cd00704         139 NAPNLPPKNFTALTRLDHNRAKAQVARKL  167 (323)
T ss_pred             HcCCCCHHHEEEeeHHHHHHHHHHHHHHh
Confidence             121 333344444444445555666655

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06849 hypothetical protein; Provisional

Probab=97.53  E-value=0.00096  Score=59.08  Aligned_cols=82  Identities=17%  Similarity=0.190  Sum_probs=55.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .|+|||||++..+|..+++.|.+.|++|++++..........+.+.  ....+...-.+++...+.+.++.+++ ++|+|
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d--~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD--GFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh--heEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            6899999999999999999999999999999888654433222222  22223223345555544444444443 58999


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      |-...
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            88764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.51  E-value=0.00028  Score=56.50  Aligned_cols=49  Identities=29%  Similarity=0.419  Sum_probs=42.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+..++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            346889999999985 8999999999999999999999988777666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.49  E-value=0.0014  Score=56.25  Aligned_cols=114  Identities=15%  Similarity=0.224  Sum_probs=73.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +-+++++.|+|+ |++|.+++..|+..|.  ++++++++++.++.....+.+.     ++.. ..  .+.++        
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~--------   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD--------   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH--------
Confidence            345789999998 9999999999999986  7999999888766655555432     1111 11  22211        


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                         +..-|++|..||...  .+  ..++.+   .+..|    ..+.+...+.+.+...++.+++++-
T Consensus        71 ---~~~adivIitag~~~--k~--g~~R~d---ll~~N----~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         71 ---CKDADLVVITAGAPQ--KP--GETRLD---LVEKN----LKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             ---hCCCCEEEEecCCCC--CC--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCeEEEEccC
Confidence               236899999999742  22  345543   34444    3444555666655444678877764

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.42  E-value=0.0025  Score=56.00  Aligned_cols=77  Identities=22%  Similarity=0.289  Sum_probs=56.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.+++++|.|+ |.+|+.++..+...|++|++++|+.++.+.+.+....    .+..+..+.+.+.+.+.       ..|
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~----~v~~~~~~~~~l~~~l~-------~aD  232 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG----RIHTRYSNAYEIEDAVK-------RAD  232 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc----eeEeccCCHHHHHHHHc-------cCC
Confidence            46678999987 7999999999999999999999998877666554432    12345556555544443       679


Q ss_pred             EEEeCCcCC
Q 024839           86 IMYSNAGVA   94 (262)
Q Consensus        86 ~li~~ag~~   94 (262)
                      ++|++++..
T Consensus       233 vVI~a~~~~  241 (370)
T TIGR00518       233 LLIGAVLIP  241 (370)
T ss_pred             EEEEccccC
Confidence            999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.40  E-value=0.0043  Score=46.75  Aligned_cols=111  Identities=21%  Similarity=0.260  Sum_probs=69.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC----Cce-EEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP----EKA-SYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~----~~~-~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|+|++|.+|.++|..|...+  .++++++++++..+.....+.+    ... ..+..  .+.+++           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence            68999999999999999999987  4699999998766655555433    111 12222  333222           2


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      .-|++|..+|...  .  ...++.   +.+..|.    .+.+...+.+.+...++.++.++.
T Consensus        69 ~aDivvitag~~~--~--~g~sR~---~ll~~N~----~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   69 DADIVVITAGVPR--K--PGMSRL---DLLEANA----KIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TESEEEETTSTSS--S--TTSSHH---HHHHHHH----HHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             cccEEEEeccccc--c--ccccHH---HHHHHhH----hHHHHHHHHHHHhCCccEEEEeCC
Confidence            5799999999742  1  234443   3344453    444555555555443677777753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.38  E-value=0.0014  Score=56.55  Aligned_cols=77  Identities=26%  Similarity=0.418  Sum_probs=56.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--CcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~d   85 (262)
                      |.++||+||+||+|...+......|++++++..+.++.+ ..+++..+.    ..|..+.+    +.+++++..+  ++|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~----vi~y~~~~----~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH----VINYREED----FVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE----EEcCCccc----HHHHHHHHcCCCCce
Confidence            899999999999999999888889988777777777666 666665432    22333332    5555655553  499


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      +++...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99999874

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.37  E-value=0.011  Score=49.24  Aligned_cols=244  Identities=15%  Similarity=0.047  Sum_probs=138.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeC--C-----chh-----HHHHHhhhCCC--ceEEEEecCCCHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAE-HGAFVIIADI--Q-----DEL-----GNQVVSSIGPE--KASYRHCDVRDEKQVEE   72 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r--~-----~~~-----~~~~~~~~~~~--~~~~~~~D~~~~~~i~~   72 (262)
                      .|+|||.|+|+|.|.+.--..+= -|++-+.+.-  .     +-.     .....+...+.  -.+-+..|..+.+-=++
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            57899999999999874333321 3455444321  1     100     00111111111  23456679888888889


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCCC---------------------------------CcCCCCHHHHHHHHHHHhhHH
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPVG---------------------------------TILDLDMAQFDRTIATNLAGS  119 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~~---------------------------------~~~~~~~~~~~~~~~~nv~~~  119 (262)
                      +++.+++.+|++|.+|+.-+..-...                                 .++.-+.+++.+...+  +|-
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~V--MGG  198 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAV--MGG  198 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHh--hCc
Confidence            99999999999999988755310000                                 0111123333333322  221


Q ss_pred             --H-HHHHHHHHHHHhCCCCcEEEEecCCCccCCC--CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCC
Q 024839          120 --V-MAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPF  194 (262)
Q Consensus       120 --~-~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~  194 (262)
                        | ..+.+++..-.-.. ..+-|-+|-+.....+  .....-+.+|.-++.-++.+...++..|-..+....=.+-|.-
T Consensus       199 eDWq~WidaLl~advlae-g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqA  277 (398)
T COG3007         199 EDWQMWIDALLEADVLAE-GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQA  277 (398)
T ss_pred             chHHHHHHHHHhcccccc-CceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhh
Confidence              1 23444443321112 2344444444433322  2345778999999999999999999886555444333333321


Q ss_pred             C--CCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          195 S--AGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       195 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      +  ....+..-....+.+   +.-..-|-+-+.+..|.++.  --.|+.+.+|--..+++--|+|+.
T Consensus       278 SsaIP~~plYla~lfkvM---Kekg~HEgcIeQi~rlfse~--ly~g~~~~~D~e~rlR~Dd~El~~  339 (398)
T COG3007         278 SSAIPMMPLYLAILFKVM---KEKGTHEGCIEQIDRLFSEK--LYSGSKIQLDDEGRLRMDDWELRP  339 (398)
T ss_pred             hhccccccHHHHHHHHHH---HHcCcchhHHHHHHHHHHHH--hhCCCCCCcCcccccccchhhcCH
Confidence            1  111222333333332   33456788889999998764  234999999999889988888765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.37  E-value=0.0011  Score=58.89  Aligned_cols=75  Identities=17%  Similarity=0.229  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+|+++|.|+ |+.|+++++.|.+.|. +++++.|+.++.+.+.++++..  ..+     ..+++.+.       ...
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~--~~~-----~~~~l~~~-------l~~  242 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNA--SAH-----YLSELPQL-------IKK  242 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCC--eEe-----cHHHHHHH-------hcc
Confidence            478999999996 9999999999999995 6999999998888887766421  111     12222222       236


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+||++.+..
T Consensus       243 aDiVI~aT~a~  253 (414)
T PRK13940        243 ADIIIAAVNVL  253 (414)
T ss_pred             CCEEEECcCCC
Confidence            89999998754

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.36  E-value=0.0034  Score=53.71  Aligned_cols=111  Identities=16%  Similarity=0.249  Sum_probs=71.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC------ceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE------KASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++.|.|+ |++|.+++..|+..|  .++++++++.+..+.....+.+.      ..... .  .+.+++          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHHh----------
Confidence            46889995 899999999999999  58999999988777666655321      11111 1  222211          


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                       ..-|++|+.+|...  .+  ..++.+   .+..|    .-+++...+.+.+...++.++++|..
T Consensus        67 -~~aDIVIitag~~~--~~--g~~R~d---ll~~N----~~i~~~~~~~i~~~~~~~~vivvsNP  119 (306)
T cd05291          67 -KDADIVVITAGAPQ--KP--GETRLD---LLEKN----AKIMKSIVPKIKASGFDGIFLVASNP  119 (306)
T ss_pred             -CCCCEEEEccCCCC--CC--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCeEEEEecCh
Confidence             36899999998742  22  345433   33334    44555566666665446777777753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.35  E-value=0.00079  Score=55.93  Aligned_cols=74  Identities=19%  Similarity=0.220  Sum_probs=55.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++||+|||+- |+.++++|.++|++|+...++....+.+.+    .....+..+..+.+++.+++.+     .++|+||+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g~~~v~~g~l~~~~l~~~l~~-----~~i~~VID   71 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQALTVHTGALDPQELREFLKR-----HSIDILVD   71 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cCCceEEECCCCHHHHHHHHHh-----cCCCEEEE
Confidence            6999999998 999999999999999998888764433322    1123455777788777666653     27999999


Q ss_pred             CCcC
Q 024839           90 NAGV   93 (262)
Q Consensus        90 ~ag~   93 (262)
                      .+..
T Consensus        72 AtHP   75 (256)
T TIGR00715        72 ATHP   75 (256)
T ss_pred             cCCH
Confidence            8754

This enzyme was found to be a monomer by gel filtration.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.34  E-value=0.00099  Score=56.31  Aligned_cols=78  Identities=13%  Similarity=0.134  Sum_probs=54.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|.| +||.+++++..|++.|. +|+++.|+.++.+++.+.+... .....  +...+++..       ....
T Consensus       122 ~~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~-~~~~~--~~~~~~~~~-------~~~~  190 (282)
T TIGR01809       122 PLAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV-GVITR--LEGDSGGLA-------IEKA  190 (282)
T ss_pred             ccCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc-Cccee--ccchhhhhh-------cccC
Confidence            35789999998 59999999999999996 6999999999888887766421 11111  111122211       1236


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       191 ~DiVInaTp~  200 (282)
T TIGR01809       191 AEVLVSTVPA  200 (282)
T ss_pred             CCEEEECCCC
Confidence            8999999765

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.31  E-value=0.0014  Score=55.34  Aligned_cols=48  Identities=23%  Similarity=0.395  Sum_probs=41.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~   53 (262)
                      +.++|+++|.|+ ||-+++++..|++.|. +++++.|+.++.+++.+.+.
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            356899999995 8999999999999996 68999999998888877663

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.30  E-value=0.001  Score=56.27  Aligned_cols=77  Identities=19%  Similarity=0.202  Sum_probs=63.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      -...+|-||++..|.-+|++|+.+|.+-++.+|+.+++..+.++++. +.-.+++  .++..+++.++       +.++|
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-~~~~~p~--~~p~~~~~~~~-------~~~VV   75 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-EAAVFPL--GVPAALEAMAS-------RTQVV   75 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-cccccCC--CCHHHHHHHHh-------cceEE
Confidence            45689999999999999999999999999999999999999998873 3333333  34666666665       78999


Q ss_pred             EeCCcCC
Q 024839           88 YSNAGVA   94 (262)
Q Consensus        88 i~~ag~~   94 (262)
                      +|++|..
T Consensus        76 lncvGPy   82 (382)
T COG3268          76 LNCVGPY   82 (382)
T ss_pred             Eeccccc
Confidence            9999975

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.30  E-value=0.00053  Score=63.02  Aligned_cols=48  Identities=35%  Similarity=0.526  Sum_probs=42.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+.
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            467899999998 699999999999999999999999888887776653

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.29  E-value=0.0013  Score=55.64  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      .+++||+++|+|. |++|+++++.|...|++|++.+|+.++.+..
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3678999999997 7799999999999999999999987765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.28  E-value=0.0018  Score=55.57  Aligned_cols=79  Identities=24%  Similarity=0.360  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+++++|+|+++++|.+++..+...|++|++++++.++.+.+ ..... .   ...|..+.+..+.+.+...  ..++|+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~--~~~~d~  238 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGA-D---YVIDYRKEDFVREVRELTG--KRGVDV  238 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC-C---eEEecCChHHHHHHHHHhC--CCCCcE
Confidence            578999999999999999999999999999998887766544 22321 1   2246666555555443322  136999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +++++|
T Consensus       239 ~i~~~g  244 (342)
T cd08266         239 VVEHVG  244 (342)
T ss_pred             EEECCc
Confidence            999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.27  E-value=0.01  Score=49.56  Aligned_cols=141  Identities=14%  Similarity=0.215  Sum_probs=80.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhH-------------------HHHHhh---hCC-CceEEE
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELG-------------------NQVVSS---IGP-EKASYR   60 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~-------------------~~~~~~---~~~-~~~~~~   60 (262)
                      .+++++|+|.| .||+|.++|+.|+..| .++.+++...-..                   +.+.+.   ++. .++..+
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            35788899998 6799999999999999 5688877542111                   111111   111 223332


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEE
Q 024839           61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSII  140 (262)
Q Consensus        61 ~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii  140 (262)
                      . +.-+++.+.+++.      .++|+||.+....                      ..-..+.+.+    .+.  +-.+|
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD~~----------------------~~k~~L~~~c----~~~--~ip~I  150 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAIDSV----------------------RPKAALIAYC----RRN--KIPLV  150 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHH----HHc--CCCEE
Confidence            1 2223333333321      2466666665421                      1111222222    222  34566


Q ss_pred             EecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCC-CCcE
Q 024839          141 CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK-HGIR  181 (262)
Q Consensus       141 ~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~gi~  181 (262)
                      ...+..+.........-..+|...+.|++.+.++|.+ +||.
T Consensus       151 ~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        151 TTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             EECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            6655555555444556677888899999999999998 6775

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.22  E-value=0.0012  Score=55.47  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +..++.++|.| +||.+++++..|++.|. +++++.|+.++.+++.+.+..........+..+.+..+           .
T Consensus       123 ~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~  190 (283)
T COG0169         123 DVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------E  190 (283)
T ss_pred             ccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------c
Confidence            34589999999 68999999999999995 79999999999998888876422211222333322221           4


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       191 ~dliINaTp~  200 (283)
T COG0169         191 ADLLINATPV  200 (283)
T ss_pred             cCEEEECCCC
Confidence            7999999754

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.18  E-value=0.0021  Score=54.36  Aligned_cols=48  Identities=19%  Similarity=0.282  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++++|+++|.|+ ||.|++++..|++.|. +|++++|+.++.+.+.+.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            457889999995 7899999999999997 69999999998888877764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.13  E-value=0.0017  Score=58.92  Aligned_cols=72  Identities=19%  Similarity=0.239  Sum_probs=52.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..   ..  .+..   ++.        .....
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~---~~--~~~~---~~~--------~l~~~  391 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG---KA--FPLE---SLP--------ELHRI  391 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---ce--echh---Hhc--------ccCCC
Confidence            467899999996 7999999999999999999999998877766655431   11  1111   111        12468


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |+||++...
T Consensus       392 DiVInatP~  400 (477)
T PRK09310        392 DIIINCLPP  400 (477)
T ss_pred             CEEEEcCCC
Confidence            999999754

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.12  E-value=0.0029  Score=54.72  Aligned_cols=80  Identities=18%  Similarity=0.380  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+|+++++|..++..+...|++|+.+.++.++.+.+.+.++...  +  .|..+.+++.+.+.....  +++|+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~--v--i~~~~~~~~~~~i~~~~~--~gvd~  224 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD--A--FNYKEEPDLDAALKRYFP--NGIDI  224 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce--e--EEcCCcccHHHHHHHhCC--CCcEE
Confidence            58899999999999999998888889999988888777666554354221  1  232222233332222211  36999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       225 v~d~~g  230 (338)
T cd08295         225 YFDNVG  230 (338)
T ss_pred             EEECCC
Confidence            998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.09  E-value=0.0028  Score=57.08  Aligned_cols=78  Identities=24%  Similarity=0.192  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEecCC----------------ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH
Q 024839            4 PRLQGKVAIIMGAA----------------SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE   67 (262)
Q Consensus         4 ~~~~~k~~lItG~s----------------~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~   67 (262)
                      .+++||++|||+|.                |..|.+||+++..+|++|+++.-... +.      ....+.++.  +.+.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~--V~ta  322 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIH--VESA  322 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEE--ecCH
Confidence            36899999999984                57899999999999999998864321 10      112344443  4444


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCC
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~   94 (262)
                      +++.+   .+.+.+. .|++|++|++.
T Consensus       323 ~eM~~---av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        323 RQMLA---AVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             HHHHH---HHHhhCC-CCEEEEecccc
Confidence            44444   4444443 69999999986

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.08  E-value=0.0033  Score=53.29  Aligned_cols=79  Identities=27%  Similarity=0.353  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+++++|+|+++++|.+++..+...|++|++++++.+..+.+ +.++. +   ...|..+.+..+++.+.. . ..++|+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~-~---~~~~~~~~~~~~~~~~~~-~-~~~~d~  211 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGA-D---VAINYRTEDFAEEVKEAT-G-GRGVDV  211 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCC-C---EEEeCCchhHHHHHHHHh-C-CCCeEE
Confidence            578999999999999999999999999999998887766555 33432 1   223444433333332211 1 136999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +++++|
T Consensus       212 vi~~~g  217 (323)
T cd05276         212 ILDMVG  217 (323)
T ss_pred             EEECCc
Confidence            999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.05  E-value=0.0037  Score=54.46  Aligned_cols=80  Identities=16%  Similarity=0.363  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+|+++++|..++..+...|++|+.++++.++.+.+.++++...    ..|..+.+++.+.+.+..  .+++|+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~----vi~~~~~~~~~~~i~~~~--~~gvD~  231 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE----AFNYKEEPDLDAALKRYF--PEGIDI  231 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE----EEECCCcccHHHHHHHHC--CCCcEE
Confidence            48899999999999999988888889999988888777655544555321    123222222333232221  136999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       232 v~d~vG  237 (348)
T PLN03154        232 YFDNVG  237 (348)
T ss_pred             EEECCC
Confidence            998876

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.05  E-value=0.0033  Score=50.58  Aligned_cols=196  Identities=18%  Similarity=0.094  Sum_probs=119.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +-.+.++.|+.+..|.++++.-...+..|.++.|+..+  +..+.-. ..+.+++.|.....-.+...       .++..
T Consensus        51 e~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw~-~~vswh~gnsfssn~~k~~l-------~g~t~  120 (283)
T KOG4288|consen   51 EVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSWP-TYVSWHRGNSFSSNPNKLKL-------SGPTF  120 (283)
T ss_pred             hHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCCC-cccchhhccccccCcchhhh-------cCCcc
Confidence            34578899999999999999999999999999888652  2222111 46777888765543222222       25666


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ++.+++.++.           ...+-++|=.......+++.+    .+ ..++++||......+.--...|--+|.+.+.
T Consensus       121 v~e~~ggfgn-----------~~~m~~ing~ani~a~kaa~~----~g-v~~fvyISa~d~~~~~~i~rGY~~gKR~AE~  184 (283)
T KOG4288|consen  121 VYEMMGGFGN-----------IILMDRINGTANINAVKAAAK----AG-VPRFVYISAHDFGLPPLIPRGYIEGKREAEA  184 (283)
T ss_pred             cHHHhcCccc-----------hHHHHHhccHhhHHHHHHHHH----cC-CceEEEEEhhhcCCCCccchhhhccchHHHH
Confidence            6677665432           234444554455555555443    34 6899999877653333233478889988764


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-c-------cch---HhHH----Hhh---hcccCCCCCHHHHHHHHHH
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGT-I-------NDV---EGFV----CKV---ANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~-------~~~---~~~~----~~~---~~~~~~~~~~~~va~~~~~  228 (262)
                      =.      +..++.|-..++||+++..-.-.- .       +..   ....    .+.   .......+..+++|.+++.
T Consensus       185 El------l~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~  258 (283)
T KOG4288|consen  185 EL------LKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALK  258 (283)
T ss_pred             HH------HHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHH
Confidence            22      223456778899999987511110 0       000   0000    000   0011336688999999999


Q ss_pred             HcCCCC
Q 024839          229 LASDES  234 (262)
Q Consensus       229 l~~~~~  234 (262)
                      .+.+++
T Consensus       259 ai~dp~  264 (283)
T KOG4288|consen  259 AIEDPD  264 (283)
T ss_pred             hccCCC
Confidence            997764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.05  E-value=0.024  Score=46.36  Aligned_cols=145  Identities=19%  Similarity=0.240  Sum_probs=81.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCch-------------------hHHHHHh---hhCC-CceEEE
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDE-------------------LGNQVVS---SIGP-EKASYR   60 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~-------------------~~~~~~~---~~~~-~~~~~~   60 (262)
                      .+++++++|.| .||+|..+++.|+..|. ++++++...-                   +.+.+.+   +++. .++..+
T Consensus         8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            35678899998 67999999999999996 6888775421                   1111122   2221 233333


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEE
Q 024839           61 HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSII  140 (262)
Q Consensus        61 ~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii  140 (262)
                      ...+. ++.+..++.      .++|+||.+....                      ..-..+.+.+.    +.  +-.+|
T Consensus        87 ~~~i~-~~~~~~l~~------~~~D~VvdaiD~~----------------------~~k~~L~~~c~----~~--~ip~I  131 (231)
T cd00755          87 EEFLT-PDNSEDLLG------GDPDFVVDAIDSI----------------------RAKVALIAYCR----KR--KIPVI  131 (231)
T ss_pred             eeecC-HhHHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHHH----Hh--CCCEE
Confidence            33333 233333321      2477777664321                      11122223222    21  23444


Q ss_pred             EecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcE--EEEE
Q 024839          141 CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR--VNCV  185 (262)
Q Consensus       141 ~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~--v~~i  185 (262)
                      ...+..+.........-..+|.-.+.|++.+..++.+.|++  +.+|
T Consensus       132 ~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v  178 (231)
T cd00755         132 SSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVV  178 (231)
T ss_pred             EEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEE
Confidence            44444444443334556677888899999999999998886  4444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.04  E-value=0.016  Score=52.89  Aligned_cols=111  Identities=22%  Similarity=0.272  Sum_probs=70.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-------------HHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-------------KQVEE   72 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~i~~   72 (262)
                      ..+.+|+|+| .|.+|...+..+...|++|++++++.++.+...+ ++   .+++..|..+.             +..++
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lG---A~~v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MG---AEFLELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEEeccccccccccchhhhcchhHHHH
Confidence            3588999999 6899999999999999999999999888765543 54   23333333221             11122


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      ..+.+.+.....|++|.+++..+..                    ++..+.+..+..|+.   .+.|+.++.
T Consensus       238 ~~~~~~~~~~gaDVVIetag~pg~~--------------------aP~lit~~~v~~mkp---GgvIVdvg~  286 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIPGKP--------------------APKLITAEMVASMKP---GSVIVDLAA  286 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCCccc--------------------CcchHHHHHHHhcCC---CCEEEEEcc
Confidence            2222222224699999999975321                    122334555665542   578888876

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.01  E-value=0.0042  Score=52.63  Aligned_cols=48  Identities=19%  Similarity=0.301  Sum_probs=38.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc---hhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD---ELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~   53 (262)
                      ++++|+++|.|+ ||-+++++..|+..|. +|+++.|+.   ++.+++.+.+.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            467899999996 6669999999999996 699999985   36666666554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.01  E-value=0.0079  Score=53.78  Aligned_cols=73  Identities=30%  Similarity=0.464  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++.+.++.   ..+.     .+++.+.+.       .
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i~-----~~~l~~~l~-------~  240 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAVK-----FEDLEEYLA-------E  240 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEee-----HHHHHHHHh-------h
Confidence            467899999996 999999999999999 6799999998887777666542   1221     123333332       5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+||.+.+.
T Consensus       241 aDvVi~aT~s  250 (417)
T TIGR01035       241 ADIVISSTGA  250 (417)
T ss_pred             CCEEEECCCC
Confidence            7999988764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.00  E-value=0.0043  Score=53.19  Aligned_cols=75  Identities=23%  Similarity=0.305  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+.+++|+|+++++|.+++..+...|++|+.+.++.+..+.+ +.+..  ..++  |.   +++.   +.+. +...+|+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~--~~~~--~~---~~~~---~~~~-~~~~~d~  229 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGA--DYVI--DG---SKFS---EDVK-KLGGADV  229 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCC--cEEE--ec---HHHH---HHHH-hccCCCE
Confidence            478999999999999999999999999999888877665444 33331  1111  21   1122   2222 2237999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +++++|.
T Consensus       230 v~~~~g~  236 (332)
T cd08259         230 VIELVGS  236 (332)
T ss_pred             EEECCCh
Confidence            9999863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.00  E-value=0.0011  Score=43.48  Aligned_cols=35  Identities=34%  Similarity=0.541  Sum_probs=23.1

Q ss_pred             CCC-CEEEEecCCChHHHH--HHHHHHHcCCeEEEeeCC
Q 024839            6 LQG-KVAIIMGAASGIGEA--TAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         6 ~~~-k~~lItG~s~giG~~--ia~~l~~~g~~V~~~~r~   41 (262)
                      ++| |+|||+|+|+|.|++  |+..+ ..|++.+.++..
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            345 899999999999999  55555 567777776544

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.98  E-value=0.004  Score=53.93  Aligned_cols=78  Identities=19%  Similarity=0.251  Sum_probs=52.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +.++||+|+++++|.+++......|+ +|+.+.++.++.+.+.++++...  +  .|..+ +++.+.+.++..  .++|+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~--v--i~~~~-~~~~~~i~~~~~--~gvd~  227 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA--A--INYKT-DNVAERLRELCP--EGVDV  227 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE--E--EECCC-CCHHHHHHHHCC--CCceE
Confidence            38999999999999999887777898 79988888877766655555322  1  22222 222222222211  36999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       228 vid~~g  233 (345)
T cd08293         228 YFDNVG  233 (345)
T ss_pred             EEECCC
Confidence            998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.97  E-value=0.0065  Score=52.20  Aligned_cols=73  Identities=22%  Similarity=0.325  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|++++|+|.+ |+|...+......|++|+.++|+.++.+.+. +++..    +..|-++++.++.+.+       .+|+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd----~~i~~~~~~~~~~~~~-------~~d~  232 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGAD----HVINSSDSDALEAVKE-------IADA  232 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCc----EEEEcCCchhhHHhHh-------hCcE
Confidence            48999999999 9999888888889999999999988875544 44321    2233335444444433       2899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|..++
T Consensus       233 ii~tv~  238 (339)
T COG1064         233 IIDTVG  238 (339)
T ss_pred             EEECCC
Confidence            999987

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.96  E-value=0.0044  Score=53.30  Aligned_cols=79  Identities=23%  Similarity=0.303  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+|+++++|..++..+...|++|+.+.++.++.+.+ ++++...    ..|..+.+.+.+..+...  .+++|+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~----vi~~~~~~~~~~~~~~~~--~~gvdv  210 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDV----AFNYKTVKSLEETLKKAS--PDGYDC  210 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCE----EEeccccccHHHHHHHhC--CCCeEE
Confidence            478999999999999999888888899999888887766554 4454211    123223223333333321  135999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       211 v~d~~G  216 (325)
T TIGR02825       211 YFDNVG  216 (325)
T ss_pred             EEECCC
Confidence            998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.95  E-value=0.0057  Score=54.81  Aligned_cols=48  Identities=31%  Similarity=0.518  Sum_probs=41.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++.+++++|.|+ |.+|..+++.|...|. +|++++|+.++...+.+.++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g  227 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG  227 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC
Confidence            467899999986 9999999999999997 79999999888777766654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.94  E-value=0.0082  Score=52.08  Aligned_cols=79  Identities=23%  Similarity=0.305  Sum_probs=52.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc---------------------hhHHHHHh---hhC-CCceE
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD---------------------ELGNQVVS---SIG-PEKAS   58 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~---------------------~~~~~~~~---~~~-~~~~~   58 (262)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                     .+.+.+.+   ++. ..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            367889999995 7899999999999996 788888763                     12222222   232 24566


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHhCCcCEEEeCCc
Q 024839           59 YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        59 ~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag   92 (262)
                      .+..|++ .+.++++++       ..|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVT-VEELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEeccCC-HHHHHHHhc-------CCCEEEEcCC
Confidence            6666764 334444433       5788887753

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.93  E-value=0.0076  Score=52.44  Aligned_cols=80  Identities=25%  Similarity=0.465  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+.+||.||++|+|.+.+.-....|+..+++.++.+.. ++.++++.+    ...|..+++-++.+.+..   .+++|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd----~vvdy~~~~~~e~~kk~~---~~~~Dv  228 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD----EVVDYKDENVVELIKKYT---GKGVDV  228 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc----EeecCCCHHHHHHHHhhc---CCCccE
Confidence            588999999999999999988888885555566665554 445555532    345666644333333322   457999


Q ss_pred             EEeCCcCC
Q 024839           87 MYSNAGVA   94 (262)
Q Consensus        87 li~~ag~~   94 (262)
                      |+-++|..
T Consensus       229 VlD~vg~~  236 (347)
T KOG1198|consen  229 VLDCVGGS  236 (347)
T ss_pred             EEECCCCC
Confidence            99999863

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.92  E-value=0.018  Score=52.39  Aligned_cols=84  Identities=24%  Similarity=0.319  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC-------------CHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR-------------DEKQVEET   73 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~i~~~   73 (262)
                      .+.+++|.| .|.+|...+..+...|+.|++++++.++.+... +++   ..++..|..             +.+..++.
T Consensus       163 p~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lG---a~~v~v~~~e~g~~~~gYa~~~s~~~~~~~  237 (511)
T TIGR00561       163 PPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMG---AEFLELDFKEEGGSGDGYAKVMSEEFIAAE  237 (511)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CeEEeccccccccccccceeecCHHHHHHH
Confidence            457899999 499999999999999999999999988765443 344   234444432             23334444


Q ss_pred             HHHHHHHhCCcCEEEeCCcCCC
Q 024839           74 VAYAIEKYGSLDIMYSNAGVAG   95 (262)
Q Consensus        74 ~~~~~~~~~~~d~li~~ag~~~   95 (262)
                      .+.+.+...+.|++|+++-+.+
T Consensus       238 ~~~~~e~~~~~DIVI~TalipG  259 (511)
T TIGR00561       238 MELFAAQAKEVDIIITTALIPG  259 (511)
T ss_pred             HHHHHHHhCCCCEEEECcccCC
Confidence            4445555567999999996543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.92  E-value=0.01  Score=52.39  Aligned_cols=48  Identities=31%  Similarity=0.497  Sum_probs=42.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++++|++||.| .|-.|.-+|+.|.++| ..|+++.|+.++..++++.++
T Consensus       175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            47899999999 5679999999999999 568999999999998888876

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.90  E-value=0.0056  Score=52.11  Aligned_cols=70  Identities=19%  Similarity=0.354  Sum_probs=49.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.+++++|.|. |++|+.++..|...|++|++++|+.++.+.. +.++   ..++  +   .+++.       +...+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G---~~~~--~---~~~l~-------~~l~~a  211 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMG---LSPF--H---LSELA-------EEVGKI  211 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcC---Ceee--c---HHHHH-------HHhCCC
Confidence            567999999996 6799999999999999999999997764433 2232   2222  1   12222       223478


Q ss_pred             CEEEeCC
Q 024839           85 DIMYSNA   91 (262)
Q Consensus        85 d~li~~a   91 (262)
                      |+||++.
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999975

>PLN00203 glutamyl-tRNA reductase

Probab=96.88  E-value=0.011  Score=54.22  Aligned_cols=77  Identities=12%  Similarity=0.253  Sum_probs=55.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+++++|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+.+.+....+.+     ...++..+.+.       .
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~-----~~~~dl~~al~-------~  329 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY-----KPLDEMLACAA-------E  329 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe-----ecHhhHHHHHh-------c
Confidence            377999999997 9999999999999996 69999999998888777664222211     12222333332       6


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+||.+.+..
T Consensus       330 aDVVIsAT~s~  340 (519)
T PLN00203        330 ADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEccCCC
Confidence            89999987643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.85  E-value=0.0059  Score=55.10  Aligned_cols=59  Identities=17%  Similarity=0.181  Sum_probs=44.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   72 (262)
                      +++|.|+ |.+|+++++.|.++|++|++++++.+..+.+.+..   .+.++..|.++++.+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~---~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL---DVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc---CEEEEEeCCCCHHHHHH
Confidence            5888887 99999999999999999999999988776654322   24556666666554443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.85  E-value=0.0072  Score=49.33  Aligned_cols=75  Identities=24%  Similarity=0.352  Sum_probs=56.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHH-HHHHHHHhCCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEET-VAYAIEKYGSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~~~~d~l   87 (262)
                      +.++|.| .|-+|+.+|+.|.++|++|++++++++..++..+.-  ...+.+.+|-++++-++++ ++       ..|++
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~--~~~~~v~gd~t~~~~L~~agi~-------~aD~v   70 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE--LDTHVVIGDATDEDVLEEAGID-------DADAV   70 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh--cceEEEEecCCCHHHHHhcCCC-------cCCEE
Confidence            3567776 678999999999999999999999999877644321  2367888999997766654 22       56777


Q ss_pred             EeCCcC
Q 024839           88 YSNAGV   93 (262)
Q Consensus        88 i~~ag~   93 (262)
                      |-..+-
T Consensus        71 va~t~~   76 (225)
T COG0569          71 VAATGN   76 (225)
T ss_pred             EEeeCC
Confidence            766653

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.83  E-value=0.0079  Score=51.62  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=54.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++.+.++.   ..+     +.+++.+.+.       ..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~~l~-------~a  239 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLELLN-------EA  239 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHHHHh-------cC
Confidence            57899999986 999999999999876 5688999998888777777652   111     2233333332       57


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |++|.+.+..
T Consensus       240 DvVi~at~~~  249 (311)
T cd05213         240 DVVISATGAP  249 (311)
T ss_pred             CEEEECCCCC
Confidence            9999998753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.0038  Score=48.45  Aligned_cols=42  Identities=21%  Similarity=0.315  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+.+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l   81 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL   81 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH
Confidence            368899999999977789999999999999999998875433

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.83  E-value=0.0084  Score=49.54  Aligned_cols=78  Identities=27%  Similarity=0.413  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+++++|+|+++ +|.+++..+...|.+|+++.+++++.+.+ +.....    ...|..+.+....+.   ....+.+|+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGAD----HVIDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCc----eeccCCcCCHHHHHH---HhcCCCCCE
Confidence            578999999999 99999999988999999998887665544 333311    122333333333332   222346999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      ++++++.
T Consensus       205 vi~~~~~  211 (271)
T cd05188         205 VIDAVGG  211 (271)
T ss_pred             EEECCCC
Confidence            9998863

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.80  E-value=0.011  Score=50.59  Aligned_cols=115  Identities=20%  Similarity=0.163  Sum_probs=65.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCc--hhHHHHHhhhCCC----ceEEEEecCC-CHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQD--ELGNQVVSSIGPE----KASYRHCDVR-DEKQVEETVAYAIE   79 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~D~~-~~~~i~~~~~~~~~   79 (262)
                      +++.|+|++|.+|..++..|+..|.  +|+++++..  +.++.....+.+.    ... .....+ +.+           
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d~~-----------   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSDLS-----------   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCCHH-----------
Confidence            3689999999999999999999986  499999954  3333222222110    000 011111 211           


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                      ....-|++|.++|...  .  .+.++.   +.+..|+.    +++.+.+.+.+....+.+|++++..
T Consensus        69 ~l~~aDiViitag~p~--~--~~~~r~---dl~~~n~~----i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          69 DVAGSDIVIITAGVPR--K--EGMSRL---DLAKKNAK----IVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             HhCCCCEEEEecCCCC--C--CCCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCch
Confidence            1236899999998642  2  233433   33344433    3344444444433367888888654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.0057  Score=51.60  Aligned_cols=40  Identities=25%  Similarity=0.401  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+++||+++|.|.++-.|+.++..|.++|++|.++.|...
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            3678999999998888999999999999999999877433

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.78  E-value=0.0094  Score=42.99  Aligned_cols=71  Identities=20%  Similarity=0.208  Sum_probs=52.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.+.    .+.++..|.++++.++++--      .+.+.+|..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~~~~i~gd~~~~~~l~~a~i------~~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----GVEVIYGDATDPEVLERAGI------EKADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----TSEEEES-TTSHHHHHHTTG------GCESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----ccccccccchhhhHHhhcCc------cccCEEEEc
Confidence            467776 5899999999999777999999999887766543    36789999999888766421      256777766


Q ss_pred             Cc
Q 024839           91 AG   92 (262)
Q Consensus        91 ag   92 (262)
                      ..
T Consensus        70 ~~   71 (116)
T PF02254_consen   70 TD   71 (116)
T ss_dssp             SS
T ss_pred             cC
Confidence            53

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.76  E-value=0.0061  Score=50.96  Aligned_cols=146  Identities=17%  Similarity=0.160  Sum_probs=81.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CeEEEeeCCchhHHHHHhhhCCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           11 AIIMGAASGIGEATAKLFAEHG----AFVIIADIQDELGNQVVSSIGPE-KASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.|+|++|.+|..++..|+..|    .++++++++++.++.....+.+. ... ....+....+..+.+       ..-|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~-------~~aD   72 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAF-------KDAD   72 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHh-------CCCC
Confidence            4689998899999999999998    78999999887776665555431 111 111211111122222       3689


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCCCccc
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSGPHAY  157 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~~~~Y  157 (262)
                      ++|..++.....    ..+..   ..+..    ..-+.+...+.+.+...++.++++|-....        .+.+.....
T Consensus        73 iVv~t~~~~~~~----g~~r~---~~~~~----n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~~~~sg~~~~kvi  141 (263)
T cd00650          73 VVIITAGVGRKP----GMGRL---DLLKR----NVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLVWRYSGLPKEKVI  141 (263)
T ss_pred             EEEECCCCCCCc----CCCHH---HHHHH----HHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCchhEE
Confidence            999999875321    23322   22222    234455555666554446777777543321        112223334


Q ss_pred             hhhhHHHHHHHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASEL  175 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~  175 (262)
                      +.+-.--..+-+.+++.+
T Consensus       142 G~~~ld~~r~~~~la~~l  159 (263)
T cd00650         142 GLGTLDPIRFRRILAEKL  159 (263)
T ss_pred             EeecchHHHHHHHHHHHh
Confidence            444344445555666665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.74  E-value=0.018  Score=49.46  Aligned_cols=114  Identities=11%  Similarity=0.124  Sum_probs=71.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCc-----eEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEK-----ASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ..++.|+|+ |.+|.++|..|+..|.  ++++++.+.+..+.....+.+..     ..+...  .+.++           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            357899996 9999999999998874  69999998876655554444311     111111  22221           


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                      ...-|++|..||...  .+  .+++.+   .+..|    .-+.+.+.+.+.+...++.++++|...
T Consensus        69 ~~~adivvitaG~~~--k~--g~~R~d---ll~~N----~~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          69 TANSKVVIVTAGARQ--NE--GESRLD---LVQRN----VDIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             hCCCCEEEECCCCCC--CC--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCcEEEEccChH
Confidence            136899999999742  22  455544   33444    345555666666555478888887543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.72  E-value=0.0091  Score=58.71  Aligned_cols=77  Identities=22%  Similarity=0.280  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-Ce-------------EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AF-------------VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   72 (262)
                      +.|+++|.|+ |.+|+..++.|++.. +.             |++++++.+..+++.+...  ++..+++|++|.+++.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~--~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE--NAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC--CCceEEeecCCHHHHHH
Confidence            4678999996 999999999998753 33             8888999888777766553  46789999999988877


Q ss_pred             HHHHHHHHhCCcCEEEeCCcC
Q 024839           73 TVAYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~   93 (262)
                      +++       ++|+||++...
T Consensus       645 ~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        645 YVS-------QVDVVISLLPA  658 (1042)
T ss_pred             hhc-------CCCEEEECCCc
Confidence            766       58999999764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.70  E-value=0.027  Score=43.23  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ   47 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~   47 (262)
                      .+.||+++|.| -|.+|+.+|++|...|++|+++..++-+.-+
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            46899999999 8999999999999999999999998765443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.69  E-value=0.015  Score=50.16  Aligned_cols=146  Identities=16%  Similarity=0.154  Sum_probs=81.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCC-c----eEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPE-K----ASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.+++.|+|+ |.+|..++..++..| .++++++++.+..+...-.+.+. .    ...+.. ..+.   + .+      
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~---~-~l------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNY---E-DI------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCH---H-Hh------
Confidence            4678999997 889999999999998 78999999876543222222211 0    011111 1222   2 11      


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGS  152 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~  152 (262)
                       ..-|+||..+|....    ..++..   +.+..|.    -+.+.+.+.+.+...++.+|++|.....        .+.|
T Consensus        72 -~~ADiVVitag~~~~----~g~~r~---dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~~~~s~~p  139 (319)
T PTZ00117         72 -KDSDVVVITAGVQRK----EEMTRE---DLLTING----KIMKSVAESVKKYCPNAFVICVTNPLDCMVKVFQEKSGIP  139 (319)
T ss_pred             -CCCCEEEECCCCCCC----CCCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHHHHHHHHHHhhCCC
Confidence             257999999986421    134443   3444554    3455566666654436667777653321        1223


Q ss_pred             CCccchhh-hHHHHHHHHHHHHHHC
Q 024839          153 GPHAYTIS-KHGLLGLVRSAASELG  176 (262)
Q Consensus       153 ~~~~Y~~s-K~a~~~~~~~la~e~~  176 (262)
                      .....+.+ -.--..+.+.++..+.
T Consensus       140 ~~rviG~gt~lds~R~~~~la~~l~  164 (319)
T PTZ00117        140 SNKICGMAGVLDSSRFRCNLAEKLG  164 (319)
T ss_pred             cccEEEecchHHHHHHHHHHHHHhC
Confidence            33344444 1112256666776654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.68  E-value=0.024  Score=41.64  Aligned_cols=76  Identities=18%  Similarity=0.287  Sum_probs=54.6

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCeEE-EeeCCc----------------------hhHHHHHhhhCCCceEEEEecCC
Q 024839           10 VAIIMGAASGIGEATAKLFAE-HGAFVI-IADIQD----------------------ELGNQVVSSIGPEKASYRHCDVR   65 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~-~g~~V~-~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~D~~   65 (262)
                      +++|.|++|..|+.+++.+.+ .+.+++ .++|..                      ..++++.+..      =+..|++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~------DVvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEA------DVVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------SEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccC------CEEEEcC
Confidence            589999999999999999999 677755 455655                      2233333331      1677999


Q ss_pred             CHHHHHHHHHHHHHHhCCcCEEEeCCcC
Q 024839           66 DEKQVEETVAYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        66 ~~~~i~~~~~~~~~~~~~~d~li~~ag~   93 (262)
                      .++.+...++.+.+.  ++.+|+-..|.
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999988887  78888887774

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK04148 hypothetical protein; Provisional

Probab=96.65  E-value=0.005  Score=45.69  Aligned_cols=55  Identities=20%  Similarity=0.144  Sum_probs=44.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE   67 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~   67 (262)
                      +++++++.|.+  .|.++|..|++.|++|+.++.+++..+.+.+.    .+.++..|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----GLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----CCeEEECcCCCC
Confidence            46789999987  88889999999999999999998876655442    356788888764

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.64  E-value=0.012  Score=50.51  Aligned_cols=145  Identities=17%  Similarity=0.187  Sum_probs=82.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCc--eEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEK--ASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++.|+|++|.+|.++|..|+..+.  +++++++++...  ....+.+..  .....+. .+ ++       ..+....-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g--~a~DL~~~~~~~~i~~~~-~~-~~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAG--VAADLSHIPTAASVKGFS-GE-EG-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcE--EEchhhcCCcCceEEEec-CC-Cc-------hHHHcCCCC
Confidence            478999999999999999998874  689999876221  111122211  1111101 00 01       122334689


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc------------CCCCC
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST------------VGGSG  153 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~  153 (262)
                      ++|..||...  .+  ..++   .+.+..|+.    +.+...+.+.+...++.+|++|-....            .+.+.
T Consensus        70 ivvitaG~~~--~~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~  138 (312)
T TIGR01772        70 VVVIPAGVPR--KP--GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDP  138 (312)
T ss_pred             EEEEeCCCCC--CC--CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCCh
Confidence            9999999742  22  3444   334555544    556666666655547788888776642            12333


Q ss_pred             CccchhhhHHHHHHHHHHHHHHC
Q 024839          154 PHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      ....+.+-.--..|-..++..+.
T Consensus       139 ~rViG~g~LDsaR~r~~la~~l~  161 (312)
T TIGR01772       139 NKLFGVTTLDIVRANTFVAELKG  161 (312)
T ss_pred             HHEEeeecchHHHHHHHHHHHhC
Confidence            34555553333456667777764

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.64  E-value=0.0097  Score=46.68  Aligned_cols=42  Identities=31%  Similarity=0.340  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN   46 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~   46 (262)
                      .++.||++.|.| .|.||+++|+.|...|.+|+..+|+.....
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence            457899999998 699999999999999999999999987654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.63  E-value=0.053  Score=46.45  Aligned_cols=145  Identities=16%  Similarity=0.154  Sum_probs=82.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCc--eEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEK--ASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++.|+|++|.+|.++|..|+.++  .++++++.+  ..+.....+.+..  .....+. .+ +++       .+....-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch-------HHhcCCCC
Confidence            68899999999999999999888  479999987  2222222222211  1111110 11 111       12234689


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc------------CCCCC
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST------------VGGSG  153 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~  153 (262)
                      ++|..||...  ++  ..++   .+.++.|.    .+++...+.+.+...++.+|++|-....            .+.+.
T Consensus        71 ivvitaG~~~--k~--g~tR---~dll~~N~----~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~  139 (310)
T cd01337          71 VVVIPAGVPR--KP--GMTR---DDLFNINA----GIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDP  139 (310)
T ss_pred             EEEEeCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCH
Confidence            9999999742  22  3454   34444554    3444455555544447788888776522            12333


Q ss_pred             CccchhhhHHHHHHHHHHHHHHC
Q 024839          154 PHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      ....+.+-.=-..|...+++.+.
T Consensus       140 ~rviG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         140 KRLFGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             HHEEeeechHHHHHHHHHHHHhC
Confidence            34566653333466667777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.63  E-value=0.013  Score=50.83  Aligned_cols=36  Identities=33%  Similarity=0.572  Sum_probs=31.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .++.++|+|.|+ ||+|..+++.|+..|. ++.+++..
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            367889999997 8999999999999997 79998875

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.62  E-value=0.029  Score=51.10  Aligned_cols=76  Identities=21%  Similarity=0.184  Sum_probs=51.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+|+++|.|+ |++|.++|+.|.++|++|+++++... ......+.+....+.++..+-..             ....
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~   78 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPED   78 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCC
Confidence            357899999995 77999999999999999999986643 22233333433334444332111             0135


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|.||...|+.
T Consensus        79 ~D~Vv~s~Gi~   89 (480)
T PRK01438         79 TDLVVTSPGWR   89 (480)
T ss_pred             CCEEEECCCcC
Confidence            89999999975

>PLN02602 lactate dehydrogenase

Probab=96.62  E-value=0.029  Score=48.82  Aligned_cols=113  Identities=10%  Similarity=0.083  Sum_probs=70.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCc----eEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEK----ASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++.|+|+ |.+|.++|..|+..+.  ++++++.+++..+.....+.+..    ..-+..+ .+.++           ..
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~-~dy~~-----------~~  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS-TDYAV-----------TA  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC-CCHHH-----------hC
Confidence            68999996 9999999999998874  69999998876655544444311    0112111 12221           23


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                      .-|++|-.||...  ++  ..++.++   +..|    ..+++...+.+.+...++.+|+++--
T Consensus       105 daDiVVitAG~~~--k~--g~tR~dl---l~~N----~~I~~~i~~~I~~~~p~~ivivvtNP  156 (350)
T PLN02602        105 GSDLCIVTAGARQ--IP--GESRLNL---LQRN----VALFRKIIPELAKYSPDTILLIVSNP  156 (350)
T ss_pred             CCCEEEECCCCCC--Cc--CCCHHHH---HHHH----HHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            5799999999742  22  3455433   3333    44555566666554447788887743

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.58  E-value=0.015  Score=46.58  Aligned_cols=36  Identities=33%  Similarity=0.567  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      ++++++|+|.| .||+|.++++.|+..|. ++.+++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            46788999999 77999999999999996 78888766

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.55  E-value=0.014  Score=49.98  Aligned_cols=78  Identities=19%  Similarity=0.287  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+||++++|..++......|++|+.+.++.++.+.+.+ ++..  .+  .|..+++..++ +.+...  +.+|+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~--~v--i~~~~~~~~~~-v~~~~~--~gvd~  214 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFD--AV--FNYKTVSLEEA-LKEAAP--DGIDC  214 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC--EE--EeCCCccHHHH-HHHHCC--CCcEE
Confidence            47899999999999999988888889999988888776655543 4421  11  23333222222 222211  35899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.54  E-value=0.03  Score=48.29  Aligned_cols=148  Identities=12%  Similarity=0.056  Sum_probs=82.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++.|+|++|++|.+++..|...|.       ++++.+...  +.++.....+.+....... +..    +   ...-.+.
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~----i---~~~~~~~   76 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA-GVV----A---TTDPEEA   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC-CcE----E---ecChHHH
Confidence            689999999999999999998873       799999864  3344333333331100000 100    0   0011122


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCc--------cC-C
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTAS--------TV-G  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~--------~~-~  150 (262)
                      ...-|+||..||..  .++  ..++.+   .+..|    .-+++.+.+.+.+... ++.++++|--..        .. +
T Consensus        77 ~~daDvVVitAG~~--~k~--g~tR~d---ll~~N----a~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g  145 (323)
T TIGR01759        77 FKDVDAALLVGAFP--RKP--GMERAD---LLSKN----GKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPD  145 (323)
T ss_pred             hCCCCEEEEeCCCC--CCC--CCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCC
Confidence            23679999999974  222  345433   44445    4455666666666543 667777764221        12 3


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      .+.....+.+..=-..|-..+++.+.
T Consensus       146 ~p~~rViG~t~LDs~R~r~~la~~l~  171 (323)
T TIGR01759       146 IPPKNFSAMTRLDHNRAKYQLAAKAG  171 (323)
T ss_pred             CCHHHEEEeeHHHHHHHHHHHHHHhC
Confidence            33334555544444455556666653

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.51  E-value=0.083  Score=45.06  Aligned_cols=145  Identities=18%  Similarity=0.191  Sum_probs=85.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |+||.++|..|+.++.  ++++.+..++..+.....+.+.     .-..+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            46899999 9999999999988763  7999999976665555455431     11122222 222222           


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|-.||...  ++  .+++.++   +..|.    .+.+...+.+.+...++.+++++-....        .+.|.
T Consensus        68 ~~aDiVvitAG~pr--Kp--GmtR~DL---l~~Na----~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~k~sg~p~  136 (313)
T COG0039          68 KGADIVVITAGVPR--KP--GMTRLDL---LEKNA----KIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAMKFSGFPK  136 (313)
T ss_pred             cCCCEEEEeCCCCC--CC--CCCHHHH---HHhhH----HHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHHHhcCCCc
Confidence            35899999999752  33  4566444   44443    3444455555554435677776653321        22232


Q ss_pred             Cc-cchhhhHHHHHHHHHHHHHHCC
Q 024839          154 PH-AYTISKHGLLGLVRSAASELGK  177 (262)
Q Consensus       154 ~~-~Y~~sK~a~~~~~~~la~e~~~  177 (262)
                      .. .-+.+..--..|-..++..+.-
T Consensus       137 ~rvig~gt~LDsaR~~~~lae~~~v  161 (313)
T COG0039         137 NRVIGSGTVLDSARFRTFLAEKLGV  161 (313)
T ss_pred             cceecccchHHHHHHHHHHHHHhCC
Confidence            22 3344555566677777777643

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.49  E-value=0.019  Score=49.79  Aligned_cols=76  Identities=20%  Similarity=0.338  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|++++|+|+ |++|...+..+...|+ +|+++++++++.+.+ ++++...    ..|..+. ++.+    +.+..+.+|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~----vi~~~~~-~~~~----~~~~~g~~D  237 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADK----LVNPQND-DLDH----YKAEKGYFD  237 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcE----EecCCcc-cHHH----HhccCCCCC
Confidence            5889999986 8999999988888898 588888888776544 4455321    2243332 2322    222235699


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|.++|.
T Consensus       238 ~vid~~G~  245 (343)
T PRK09880        238 VSFEVSGH  245 (343)
T ss_pred             EEEECCCC
Confidence            99999873

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.46  E-value=0.018  Score=48.94  Aligned_cols=77  Identities=27%  Similarity=0.390  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .+++++|+|+++++|.+++..+...|++|+++.++++..+.+ .+.+- +   ...+..+.+..+.    +....  .++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~-~---~~~~~~~~~~~~~----~~~~~~~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGA-D---IAINYREEDFVEV----VKAETGGKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC-c---EEEecCchhHHHH----HHHHcCCCCe
Confidence            578999999999999999999999999999998887765543 43331 1   1123333332222    22222  259


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|++++
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.44  E-value=0.02  Score=48.03  Aligned_cols=105  Identities=15%  Similarity=0.200  Sum_probs=71.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~~   84 (262)
                      .|.|++|++|++..|.- |-++++ +|++|+.+.-..++.+-+.++++.+.+    .|-..+    .+.+.+.+..+ .+
T Consensus       150 ~GetvvVSaAaGaVGsv-vgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~----idyk~~----d~~~~L~~a~P~GI  220 (340)
T COG2130         150 AGETVVVSAAAGAVGSV-VGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAG----IDYKAE----DFAQALKEACPKGI  220 (340)
T ss_pred             CCCEEEEEecccccchH-HHHHHHhhCCeEEEecCCHHHHHHHHHhcCCcee----eecCcc----cHHHHHHHHCCCCe
Confidence            59999999999999975 455555 689999999999998877777765333    343333    33334444444 59


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG  150 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~  150 (262)
                      |+.+-|.|..                           +..+.++.|..   .+||+..+-++.+..
T Consensus       221 DvyfeNVGg~---------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN~  256 (340)
T COG2130         221 DVYFENVGGE---------------------------VLDAVLPLLNL---FARIPVCGAISQYNA  256 (340)
T ss_pred             EEEEEcCCch---------------------------HHHHHHHhhcc---ccceeeeeehhhcCC
Confidence            9999999842                           12334455433   578888877666544

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.42  E-value=0.029  Score=46.43  Aligned_cols=36  Identities=22%  Similarity=0.529  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++..
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            357889999997 9999999999999995 57777654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.40  E-value=0.027  Score=48.23  Aligned_cols=79  Identities=20%  Similarity=0.297  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+.+.+.++..    ...|..+.+..+++.+ ..  .+.+|+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~v~~-~~--~~~~d~  217 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD----AAINYKTPDLAEALKE-AA--PDGIDV  217 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc----eEEecCChhHHHHHHH-hc--cCCceE
Confidence            4789999999999999999999999999998888877665554434421    1122233322222222 21  146999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       218 vi~~~g  223 (329)
T cd05288         218 YFDNVG  223 (329)
T ss_pred             EEEcch
Confidence            998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK05442 malate dehydrogenase; Provisional

Probab=96.39  E-value=0.033  Score=48.03  Aligned_cols=150  Identities=11%  Similarity=0.066  Sum_probs=81.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCch--hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      -+++.|+|++|.+|..+|..|+..+.       ++++++..+.  .+......+.+...-+.. ++       .+.....
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~-~~-------~i~~~~y   75 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLA-GV-------VITDDPN   75 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcC-Cc-------EEecChH
Confidence            35899999999999999999988763       6899988543  222222222211000000 00       0001112


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEecCCCcc--------C
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTTSTAST--------V  149 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~isS~~~~--------~  149 (262)
                      +....-|++|-.||..  .++  ..++.   +.+..|    .-+++.+.+.+.+ .+.++.+|++|-....        .
T Consensus        76 ~~~~daDiVVitaG~~--~k~--g~tR~---dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s  144 (326)
T PRK05442         76 VAFKDADVALLVGARP--RGP--GMERK---DLLEAN----GAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNA  144 (326)
T ss_pred             HHhCCCCEEEEeCCCC--CCC--CCcHH---HHHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHc
Confidence            2334689999999964  222  34543   344444    4556666777666 3236777777743211        1


Q ss_pred             -CCCCCccchhhhHHHHHHHHHHHHHHC
Q 024839          150 -GGSGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                       +.+.....+.+..=-..|-..+++.+.
T Consensus       145 ~g~p~~rViG~t~LDs~R~r~~la~~l~  172 (326)
T PRK05442        145 PDLPAENFTAMTRLDHNRALSQLAAKAG  172 (326)
T ss_pred             CCCCHHHEEeeeHHHHHHHHHHHHHHhC
Confidence             223333555544444455566666653

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.38  E-value=0.019  Score=48.75  Aligned_cols=79  Identities=23%  Similarity=0.338  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++++++|+|+++++|.+++..+...|++|+.+.++.++.+.+ ...+.  -.++  |....+....+.+.. . ...+|+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~~~~--~~~~~~~~~~~~~~~-~-~~~~d~  216 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGA--AHVI--VTDEEDLVAEVLRIT-G-GKGVDV  216 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCC--CEEE--ecCCccHHHHHHHHh-C-CCCceE
Confidence            578999999999999999999999999999998887765554 33331  1122  222222222222211 1 125999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++++.+
T Consensus       217 vi~~~~  222 (328)
T cd08268         217 VFDPVG  222 (328)
T ss_pred             EEECCc
Confidence            999876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.36  E-value=0.014  Score=43.87  Aligned_cols=44  Identities=25%  Similarity=0.332  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ   47 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~   47 (262)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.++.++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            46889999999999999999999999999999999866544443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.35  E-value=0.011  Score=43.65  Aligned_cols=84  Identities=20%  Similarity=0.241  Sum_probs=51.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhCC----------CceEEEEecCCCHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGP----------EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      -++-|.|+ |..|.++++.|.+.|+.|..+ +|+.+..+++.+.+..          .+...+.+-+.|. .+..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence            36888986 899999999999999998776 5665555555444321          1233333444443 677778777


Q ss_pred             HHH--hCCcCEEEeCCcCC
Q 024839           78 IEK--YGSLDIMYSNAGVA   94 (262)
Q Consensus        78 ~~~--~~~~d~li~~ag~~   94 (262)
                      ...  ..+=.+|+|+.|-.
T Consensus        89 a~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HCC--S-TT-EEEES-SS-
T ss_pred             HHhccCCCCcEEEECCCCC
Confidence            654  22235899999865

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.32  E-value=0.033  Score=49.14  Aligned_cols=36  Identities=31%  Similarity=0.481  Sum_probs=30.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .+++++|+|.| .||+|..+++.|+..|. ++.++++.
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678899996 58999999999999997 68888876

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.30  E-value=0.064  Score=39.91  Aligned_cols=76  Identities=24%  Similarity=0.356  Sum_probs=49.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc-------------------hhHH---HHHhhhC-CCceEEEEec
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD-------------------ELGN---QVVSSIG-PEKASYRHCD   63 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~-------------------~~~~---~~~~~~~-~~~~~~~~~D   63 (262)
                      .++++|.| .|++|..+++.|+..|. ++.+++...                   .+.+   +..+++. ..++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            56889988 78999999999999997 588876431                   1122   2222232 2466677777


Q ss_pred             CCCHHHHHHHHHHHHHHhCCcCEEEeCCc
Q 024839           64 VRDEKQVEETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        64 ~~~~~~i~~~~~~~~~~~~~~d~li~~ag   92 (262)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            6 4455555553       6798888754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.27  E-value=0.013  Score=45.02  Aligned_cols=47  Identities=23%  Similarity=0.376  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++....+.+++..+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            46889999999999999999999999999999998777666655443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.25  E-value=0.048  Score=43.62  Aligned_cols=36  Identities=28%  Similarity=0.466  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .++.++++|.|+ ||+|..+|..|+..|. ++++++.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            356789999996 7899999999999998 69998877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PLN02928 oxidoreductase family protein

Probab=96.22  E-value=0.023  Score=49.54  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+.||++.|.| .|.||+++|+.|...|.+|+..+|+.
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence            57899999999 59999999999999999999998874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.21  E-value=0.025  Score=47.97  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++.||.+.|.|.++-.|+.+|..|.++|++|.++.++.+..++..+..     .++..=+.+++.+....       -+
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~A-----DIVIsavg~~~~v~~~~-------ik  222 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQA-----DIVVAAVGRPRLIDADW-------LK  222 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcC-----CEEEEecCChhcccHhh-------cc
Confidence            3678999999999999999999999999999999977766655544332     23444445554444322       24


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      ...+|-..|+.
T Consensus       223 ~GaiVIDvgin  233 (301)
T PRK14194        223 PGAVVIDVGIN  233 (301)
T ss_pred             CCcEEEEeccc
Confidence            55666666665

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.18  E-value=0.1  Score=44.74  Aligned_cols=38  Identities=16%  Similarity=0.097  Sum_probs=33.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .++||++.|.| .|.||+++|+.|...|++|+..++..+
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            57899999998 789999999999999999999887653

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.15  E-value=0.12  Score=44.79  Aligned_cols=39  Identities=31%  Similarity=0.436  Sum_probs=34.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      .++|+++.|.| .|.||+++|+.|...|++|+..+++++.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            57899999998 5789999999999999999999988653

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.14  E-value=0.041  Score=45.00  Aligned_cols=35  Identities=26%  Similarity=0.496  Sum_probs=29.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADI   40 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r   40 (262)
                      .+++++|+|.| .||+|.++++.|+..|. ++++++.
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            35688999999 78999999999999996 5777754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.11  E-value=0.024  Score=43.71  Aligned_cols=82  Identities=20%  Similarity=0.163  Sum_probs=57.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----CC-----CceEEEEecCCCHHHHHHHHHH--H
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GP-----EKASYRHCDVRDEKQVEETVAY--A   77 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-----~~~~~~~~D~~~~~~i~~~~~~--~   77 (262)
                      +++-+.|- |..|..+|+.|++.|++|.+.+|++++.+++.+.-    .+     .+..++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            36788885 89999999999999999999999988877765442    11     1345666677888888888876  5


Q ss_pred             HHHhCCcCEEEeCC
Q 024839           78 IEKYGSLDIMYSNA   91 (262)
Q Consensus        78 ~~~~~~~d~li~~a   91 (262)
                      .....+=.++|...
T Consensus        81 ~~~l~~g~iiid~s   94 (163)
T PF03446_consen   81 LAGLRPGKIIIDMS   94 (163)
T ss_dssp             GGGS-TTEEEEE-S
T ss_pred             hhccccceEEEecC
Confidence            55444445566554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.10  E-value=0.034  Score=49.79  Aligned_cols=114  Identities=9%  Similarity=0.011  Sum_probs=73.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-------CC--eEEEeeCCchhHHHHHhhhCCCc-eE--EEEecCCCHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-------GA--FVIIADIQDELGNQVVSSIGPEK-AS--YRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-~~--~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++.|+|++|.+|.++|..|+..       +.  ++++++++.+.++...-++.+.- ..  -+..-..+.+         
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye---------  172 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYE---------  172 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHH---------
Confidence            6999999999999999999988       64  68999999888776655554421 00  0110011222         


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEecCC
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTTST  145 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~isS~  145 (262)
                        .+..-|++|..||..  .++  .+++.   +.++.|    .-+++...+.+.+ ...++.+|++|--
T Consensus       173 --~~kdaDiVVitAG~p--rkp--G~tR~---dLl~~N----~~I~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        173 --VFQDAEWALLIGAKP--RGP--GMERA---DLLDIN----GQIFAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             --HhCcCCEEEECCCCC--CCC--CCCHH---HHHHHH----HHHHHHHHHHHHHhcCCCeEEEEcCCc
Confidence              223689999999974  222  34543   344445    4455666666666 3447788887753

>PRK14968 putative methyltransferase; Provisional

Probab=96.10  E-value=0.13  Score=40.17  Aligned_cols=74  Identities=19%  Similarity=0.184  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---C--ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---E--KASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|-.|++.|.   ++..+++.+.+|+.++++++..+...+.+..   .  .+.++.+|+.+.         +.+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            57889999988777   5566666688999999998877655444321   1  277888886542         111  


Q ss_pred             CCcCEEEeCCcCC
Q 024839           82 GSLDIMYSNAGVA   94 (262)
Q Consensus        82 ~~~d~li~~ag~~   94 (262)
                      .++|.++.|..+.
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            2699999988754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.08  E-value=0.033  Score=50.26  Aligned_cols=77  Identities=22%  Similarity=0.250  Sum_probs=59.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+...  .+.++..|.++++.++++-      ..+.|
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~--~~~~i~gd~~~~~~L~~~~------~~~a~  299 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP--NTLVLHGDGTDQELLEEEG------IDEAD  299 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC--CCeEEECCCCCHHHHHhcC------CccCC
Confidence            34678999997 999999999999999999999999887776655432  3567889999987765432      12577


Q ss_pred             EEEeCC
Q 024839           86 IMYSNA   91 (262)
Q Consensus        86 ~li~~a   91 (262)
                      .+|...
T Consensus       300 ~vi~~~  305 (453)
T PRK09496        300 AFIALT  305 (453)
T ss_pred             EEEECC
Confidence            777543

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.08  E-value=0.075  Score=45.62  Aligned_cols=38  Identities=29%  Similarity=0.359  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      ..+.||++.|.| .|.||+++|+.+...|.+|+..+|..
T Consensus       141 ~~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            358999999999 69999999999999999999988753

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.04  E-value=0.018  Score=46.70  Aligned_cols=41  Identities=20%  Similarity=0.281  Sum_probs=36.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      ++.|+||+|.+|.+++..|++.|++|.+.+|++++.+...+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            58899999999999999999999999999999887766544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.04  E-value=0.063  Score=47.13  Aligned_cols=79  Identities=20%  Similarity=0.327  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||+|+ ++||...+..+...|+ +|+.++++.++.+.+ ++++..    ...|..+ .+++.+.+.++..  +.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~----~~i~~~~~~~~~~~~v~~~~~--~g~  256 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGAT----DCVNPNDYDKPIQEVIVEITD--GGV  256 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCC----eEEcccccchhHHHHHHHHhC--CCC
Confidence            4789999985 8999999888888898 698888888776555 444421    1223332 2233333333222  369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       257 d~vid~~G~  265 (368)
T TIGR02818       257 DYSFECIGN  265 (368)
T ss_pred             CEEEECCCC
Confidence            999999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.01  E-value=0.015  Score=41.23  Aligned_cols=37  Identities=27%  Similarity=0.442  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      +++||++||.|| |.+|..=++.|.+.|++|++++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            678999999997 8999999999999999999998885

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.01  E-value=0.058  Score=47.29  Aligned_cols=79  Identities=19%  Similarity=0.317  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||.|+ +++|...+..+...|+ .|+.++++.++.+.+ ++++...    ..|..+. +++.+.+.++..  +++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~----~i~~~~~~~~~~~~v~~~~~--~g~  257 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD----CVNPKDHDKPIQQVLVEMTD--GGV  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE----EEcccccchHHHHHHHHHhC--CCC
Confidence            4889999975 8999999999988999 688888988877654 4454221    1233332 234444443322  369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus       258 d~vid~~g~  266 (368)
T cd08300         258 DYTFECIGN  266 (368)
T ss_pred             cEEEECCCC
Confidence            999998773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.00  E-value=0.045  Score=47.28  Aligned_cols=78  Identities=19%  Similarity=0.212  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|.++||+|+ +++|..++..+...|++ |+++++++++.+.+ ++++..    ...|..+.+ .+++.+.. . ..++|
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~----~~i~~~~~~-~~~~~~~~-~-~~~~d  233 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGAD----FVINSGQDD-VQEIRELT-S-GAGAD  233 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC----EEEcCCcch-HHHHHHHh-C-CCCCC
Confidence            4889999986 89999999988889998 98888887776544 445421    223433333 33222211 1 12699


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|.+.|.
T Consensus       234 ~vid~~g~  241 (339)
T cd08239         234 VAIECSGN  241 (339)
T ss_pred             EEEECCCC
Confidence            99998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.00  E-value=0.023  Score=47.87  Aligned_cols=39  Identities=28%  Similarity=0.456  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+++||.++|+|.|.-+|+.++..|.++|++|+++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            368999999999999999999999999999999887654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.99  E-value=0.038  Score=45.12  Aligned_cols=36  Identities=28%  Similarity=0.470  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~   41 (262)
                      ++++++++|.|+ |+.|++++..|.+.|.   ++.+++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578999999996 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.91  E-value=0.048  Score=48.68  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=36.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN   46 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~   46 (262)
                      .+.||+++|+|. |.||+.++..|...|.+|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            368999999996 68999999999999999999998876543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.049  Score=46.21  Aligned_cols=78  Identities=21%  Similarity=0.179  Sum_probs=54.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.||+++|.|-++-.|+.+|..|.++|++|.++. |+. .+++..+.     ..++.+=+.+++.++...       -+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~~-----ADIVIsavg~~~~v~~~~-------lk  221 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCRR-----ADILVAAVGRPEMVKGDW-------IK  221 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHhc-----CCEEEEecCChhhcchhe-------ec
Confidence            67899999999999999999999999999999994 554 33333322     224444455555444332       24


Q ss_pred             cCEEEeCCcCCC
Q 024839           84 LDIMYSNAGVAG   95 (262)
Q Consensus        84 ~d~li~~ag~~~   95 (262)
                      ...+|-..|+..
T Consensus       222 ~GavVIDvGin~  233 (296)
T PRK14188        222 PGATVIDVGINR  233 (296)
T ss_pred             CCCEEEEcCCcc
Confidence            566777777753

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.85  E-value=0.057  Score=46.28  Aligned_cols=78  Identities=23%  Similarity=0.370  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+.+++|.|+++.+|.+++......|.+|+.+.++.++.+.+ +.++..  .++  |..+. +..+.+.....  ..+|.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~--~v~--~~~~~-~~~~~~~~~~~--~~vd~  210 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD--RPI--NYKTE-DLGEVLKKEYP--KGVDV  210 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc--eEE--eCCCc-cHHHHHHHhcC--CCCeE
Confidence            578999999999999999998888999999888877665544 444421  122  22222 22222222211  35899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++++.|
T Consensus       211 v~~~~g  216 (329)
T cd08250         211 VYESVG  216 (329)
T ss_pred             EEECCc
Confidence            998765

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.85  E-value=0.021  Score=45.57  Aligned_cols=69  Identities=20%  Similarity=0.249  Sum_probs=44.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCC-------------CceEEEEecCCCHHHHHHHHHH
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGP-------------EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ....||+|.||.+++++|++.|++|++.+|+.++ .+.+.+.+..             .++.++..-.   +.+..+..+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            3455669999999999999999999998666554 4444444321             2344444443   334556666


Q ss_pred             HHHHhC
Q 024839           77 AIEKYG   82 (262)
Q Consensus        77 ~~~~~~   82 (262)
                      +.+..+
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            666554

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.071  Score=44.92  Aligned_cols=80  Identities=15%  Similarity=0.163  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++.||+++|.|.|.-+|+.++..|.++|++|.++.+....+.+..+.   .++.+...  ..+.-+.       ..+-+
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~---ADIVV~av--G~~~~i~-------~~~ik  221 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQ---ADIVVAAV--GKRNVLT-------ADMVK  221 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhh---CCEEEEcC--CCcCccC-------HHHcC
Confidence            367899999999999999999999999999999887665555443332   23333222  2222111       12236


Q ss_pred             cCEEEeCCcCCC
Q 024839           84 LDIMYSNAGVAG   95 (262)
Q Consensus        84 ~d~li~~ag~~~   95 (262)
                      ...+|-++|+..
T Consensus       222 ~gavVIDVGin~  233 (285)
T PRK14189        222 PGATVIDVGMNR  233 (285)
T ss_pred             CCCEEEEccccc
Confidence            677888888763

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.84  E-value=0.1  Score=47.04  Aligned_cols=40  Identities=28%  Similarity=0.465  Sum_probs=34.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV   49 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~   49 (262)
                      ++.|+||.|.+|.++++.|.+.|++|.+.+|+++...+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5899999999999999999999999999999877654433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.83  E-value=0.04  Score=44.19  Aligned_cols=37  Identities=19%  Similarity=0.312  Sum_probs=33.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      +++||.+||.|| |.+|...++.|.+.|++|+++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            578999999996 8999999999999999999987653

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.83  E-value=0.064  Score=48.40  Aligned_cols=74  Identities=18%  Similarity=0.261  Sum_probs=49.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh--HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL--GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +.+|+++|+|.+ ++|.++|+.|+++|+.|++.+.....  ..++ +... ..+.+...+. +..    ..       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l-~~~~-~gi~~~~g~~-~~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQI-GKMF-DGLVFYTGRL-KDA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHH-hhcc-CCcEEEeCCC-CHH----HH-------hC
Confidence            678999999976 99999999999999999998876543  1121 1111 1233333221 111    11       26


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|.||...|+.
T Consensus        68 ~d~vv~spgi~   78 (445)
T PRK04308         68 FDILALSPGIS   78 (445)
T ss_pred             CCEEEECCCCC
Confidence            89999999985

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.80  E-value=0.056  Score=46.11  Aligned_cols=77  Identities=22%  Similarity=0.324  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .+.+++|+|+++++|.+++..+...|++|+.+.++.++.+.+ +.++. . .  ..|..+.+..++    +.+..+  ++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~-~-~--~~~~~~~~~~~~----~~~~~~~~~~  212 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGA-D-V--AVDYTRPDWPDQ----VREALGGGGV  212 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC-C-E--EEecCCccHHHH----HHHHcCCCCc
Confidence            477999999999999999999999999999988887766544 44442 1 1  123333332222    222222  59


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++++.|
T Consensus       213 d~vl~~~g  220 (324)
T cd08244         213 TVVLDGVG  220 (324)
T ss_pred             eEEEECCC
Confidence            99999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.80  E-value=0.067  Score=46.85  Aligned_cols=74  Identities=16%  Similarity=0.356  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||.|+ ++||..++..+...|++|++++.+.++..+..++++...  +  .|..+.+.+.       +..+.+|+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~--v--i~~~~~~~~~-------~~~~~~D~  250 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADS--F--LVSTDPEKMK-------AAIGTMDY  250 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcE--E--EcCCCHHHHH-------hhcCCCCE
Confidence            5889999775 899999998888889998888777665555555554211  1  2333332222       22246899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+.|
T Consensus       251 vid~~g  256 (360)
T PLN02586        251 IIDTVS  256 (360)
T ss_pred             EEECCC
Confidence            998887

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.80  E-value=0.16  Score=44.12  Aligned_cols=38  Identities=24%  Similarity=0.293  Sum_probs=34.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+.||++.|.|- |.||+++|+.|...|.+|+..+|+.+
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            578999999995 99999999999999999999988754

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.79  E-value=0.072  Score=46.59  Aligned_cols=36  Identities=25%  Similarity=0.410  Sum_probs=30.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      ++++++|+|.|+ ||+|..+++.|+..|. ++.+++..
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            367889999996 8999999999999996 57787654

>PLN02740 Alcohol dehydrogenase-like

Probab=95.79  E-value=0.063  Score=47.37  Aligned_cols=79  Identities=27%  Similarity=0.357  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||.|+ ++||..++..+...|+ +|+.++++.++.+.+ ++++..  .+  .|..+. +++.+.+.++..  +.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~--~~--i~~~~~~~~~~~~v~~~~~--~g~  269 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGIT--DF--INPKDSDKPVHERIREMTG--GGV  269 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCc--EE--EecccccchHHHHHHHHhC--CCC
Confidence            4889999985 8999999998888898 588888888876655 444421  12  233332 123333332221  269


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       270 dvvid~~G~  278 (381)
T PLN02740        270 DYSFECAGN  278 (381)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.78  E-value=0.062  Score=36.61  Aligned_cols=35  Identities=37%  Similarity=0.721  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADI   40 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r   40 (262)
                      ++.+|+++|.|. ++.|+.++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            477999999998 99999999999998 567888777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.78  E-value=0.069  Score=47.63  Aligned_cols=85  Identities=14%  Similarity=0.153  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCCchhHHHHHhhhCCC----ceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIGPE----KASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .|.+++|.||++++|...+..+...|.   +|+.+++++++.+.+.+.....    .......|..+.+++.+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            367999999999999998877666554   7999999988876654432210    112122343332233333322211


Q ss_pred             HhCCcCEEEeCCc
Q 024839           80 KYGSLDIMYSNAG   92 (262)
Q Consensus        80 ~~~~~d~li~~ag   92 (262)
                       ...+|++|.+.|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             125899998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.76  E-value=0.11  Score=44.80  Aligned_cols=118  Identities=15%  Similarity=0.175  Sum_probs=68.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.+++.|+| +|.+|..++..++..|. +|++++.+++..+...-.+.+      ....+..  ..|.++          
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----------   71 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----------   71 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----------
Confidence            457899999 58899999999999994 899999988754211111111      1111111  122211          


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcC--CCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTIL--DLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                       ...-|+||..+|.....+. .  +++.   .+.+..|+    -+.+.+.+.+.+...++.+|++|-..
T Consensus        72 -l~~aDiVI~tag~~~~~~~-~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRPGK-SDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             -hCCCCEEEECCCCCCCCCC-CcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence             1367999999987532111 1  1133   33344443    35556666666544356777776543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.76  E-value=0.066  Score=43.28  Aligned_cols=36  Identities=28%  Similarity=0.403  Sum_probs=30.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~   41 (262)
                      +++.++|+|.| .||+|..+++.|+..|.. +.+++.+
T Consensus        25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678899999 589999999999999975 8888776

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.73  E-value=0.9  Score=38.92  Aligned_cols=143  Identities=15%  Similarity=0.132  Sum_probs=85.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-------ceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-------KASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++.|.|+ |.+|..+|..|+.++.  ++++++.+++..+.....+.+.       ++... .  .+.++           
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~y~~-----------   65 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GDYDD-----------   65 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CCHHH-----------
Confidence            3678897 9999999999998874  6999999877665544444331       22222 2  23222           


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGS  152 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~  152 (262)
                      ...-|++|-.||...  ++  ..+++ =.+.+..|    ..+.+...+.+.+...++.++++|-....        .+.+
T Consensus        66 ~~~aDivvitaG~~~--kp--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p  136 (307)
T cd05290          66 CADADIIVITAGPSI--DP--GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYP  136 (307)
T ss_pred             hCCCCEEEECCCCCC--CC--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcC
Confidence            235899999999742  22  23420 12333344    45666677777765546777777654321        2233


Q ss_pred             CCccchh-hhHHHHHHHHHHHHHHC
Q 024839          153 GPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       153 ~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .....++ +-.--..|...+++.+.
T Consensus       137 ~~rviG~gt~LDs~R~~~~la~~l~  161 (307)
T cd05290         137 ANKVIGTGTMLDTARLRRIVADKYG  161 (307)
T ss_pred             hhheecccchHHHHHHHHHHHHHhC
Confidence            3444555 34445566667777764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.71  E-value=0.055  Score=42.74  Aligned_cols=37  Identities=38%  Similarity=0.512  Sum_probs=34.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      ++.||.++|.|-|.=+|+-++..|.++|++|.+++.+
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~   95 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN   95 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence            6899999999999999999999999999999998643

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.66  E-value=0.18  Score=43.17  Aligned_cols=109  Identities=16%  Similarity=0.154  Sum_probs=66.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|.|+ |.+|..++..|+.+|  .+|++++++.+..+.....+.+.     ..... .  .+.+           ...
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHH-----------HhC
Confidence            4889997 899999999999999  57999999887665333333321     11111 1  1221           123


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      .-|++|.+++....  +  ..+.   .+.+..|    .-+.+.+.+.+.+...++.+++++.
T Consensus        67 ~aDiViita~~~~~--~--~~~r---~dl~~~n----~~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQK--P--GETR---LDLLKRN----VAIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCC--C--CCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            68999999986421  1  2333   3334444    3445555555554443678777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.66  E-value=0.071  Score=48.07  Aligned_cols=40  Identities=23%  Similarity=0.454  Sum_probs=34.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .+.||+++|.|.+ .||+.+|++|...|++|+++.+++...
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            5789999999966 699999999999999999988775543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.65  E-value=0.11  Score=45.82  Aligned_cols=75  Identities=19%  Similarity=0.336  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|++++|.|+ +++|..++......|++|++++++.++..+..++++...    ..|..+.+.+       .+..+.+|+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~----~i~~~~~~~v-------~~~~~~~D~  245 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADS----FLVTTDSQKM-------KEAVGTMDF  245 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcE----EEcCcCHHHH-------HHhhCCCcE
Confidence            5889999986 899999999888899999888877665444545554311    1233332222       222246999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.+.|.
T Consensus       246 vid~~G~  252 (375)
T PLN02178        246 IIDTVSA  252 (375)
T ss_pred             EEECCCc
Confidence            9998863

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.65  E-value=0.092  Score=44.52  Aligned_cols=76  Identities=25%  Similarity=0.325  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.+++|.|+++++|.+++......|++|+.+.++.++.+.+ .+++-..  ++ .+  .. +..+   ++.+...++|.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~--~~-~~--~~-~~~~---~i~~~~~~~d~  211 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADE--VV-ID--DG-AIAE---QLRAAPGGFDK  211 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcE--EE-ec--Cc-cHHH---HHHHhCCCceE
Confidence            478999999999999999999999999999888887665444 4444211  11 12  11 2222   22222236999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.+
T Consensus       212 vl~~~~  217 (320)
T cd08243         212 VLELVG  217 (320)
T ss_pred             EEECCC
Confidence            998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.63  E-value=0.17  Score=43.20  Aligned_cols=142  Identities=19%  Similarity=0.179  Sum_probs=78.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCC------ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPE------KASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |.+|..++..++..|. +|++++++++..+.....+.+.      ... +.. ..+.+           ..
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~-----------~~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYE-----------DI   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHH-----------HH
Confidence            47899998 9999999999999875 8999999877654333222211      111 111 11211           12


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|...  ++  ..+..+   .+.-|    .-+.+.+.+.+.+...++.+|+++-....        .+.+.
T Consensus        69 ~~aDiVii~~~~p~--~~--~~~r~~---~~~~n----~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~~~~s~~~~  137 (307)
T PRK06223         69 AGSDVVVITAGVPR--KP--GMSRDD---LLGIN----AKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVALKESGFPK  137 (307)
T ss_pred             CCCCEEEECCCCCC--Cc--CCCHHH---HHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCc
Confidence            36799999998642  22  234322   22233    34455555555554335667776543321        12333


Q ss_pred             CccchhhhHHHH--HHHHHHHHHHC
Q 024839          154 PHAYTISKHGLL--GLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~sK~a~~--~~~~~la~e~~  176 (262)
                      ....+.. ..++  .+-+.+++.+.
T Consensus       138 ~~viG~g-t~lds~r~~~~la~~l~  161 (307)
T PRK06223        138 NRVIGMA-GVLDSARFRTFIAEELN  161 (307)
T ss_pred             ccEEEeC-CCcHHHHHHHHHHHHhC
Confidence            3455554 2333  66667777664

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.60  E-value=0.091  Score=44.86  Aligned_cols=111  Identities=15%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839           11 AIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +.|.|+ |++|.+++..|+..|  .++++++++.+..+.....+.+.     ......+  .+.+           ....
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-----------~l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-----------DAAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-----------HhCC
Confidence            357886 679999999999998  67999999988776666555431     1111111  1211           1236


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                      -|++|..+|...  .+  ..++.   +.+..|    .-+++.+.+.+.+...++.+|++|...
T Consensus        67 aDiVIitag~p~--~~--~~~R~---~l~~~n----~~i~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          67 ADIVVITAGAPR--KP--GETRL---DLINRN----APILRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CCEEEEcCCCCC--CC--CCCHH---HHHHHH----HHHHHHHHHHHHHhCCCeEEEEccChH
Confidence            899999999742  22  34443   333333    345555666666544478888887533

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.60  E-value=0.08  Score=45.17  Aligned_cols=78  Identities=19%  Similarity=0.166  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .|.++||.|+++.+|.+++......|+.|+.+.++.++.+.+.+ ++. + .++  +..+. +.   .+.+.+..+  ++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~-~-~~~--~~~~~-~~---~~~i~~~~~~~~~  209 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGI-G-PVV--STEQP-GW---QDKVREAAGGAPI  209 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCC-C-EEE--cCCCc-hH---HHHHHHHhCCCCC
Confidence            47899999999999999999999999999988887776655543 331 1 122  22222 22   222333332  59


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |+++.+.|.
T Consensus       210 d~v~d~~g~  218 (324)
T cd08292         210 SVALDSVGG  218 (324)
T ss_pred             cEEEECCCC
Confidence            999988763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.57  E-value=0.089  Score=41.11  Aligned_cols=32  Identities=31%  Similarity=0.429  Sum_probs=27.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD   42 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~   42 (262)
                      +|+|.| .||+|..+++.|+..|. ++++++...
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            378888 58999999999999997 499988764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.55  E-value=0.069  Score=45.30  Aligned_cols=73  Identities=16%  Similarity=0.246  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC-CHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR-DEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|+++.|+|+++ +|.--++.-..-|++|+.+++...+.+++.+.++..    .-.|.+ +++.++++.+       -.|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd----~fv~~~~d~d~~~~~~~-------~~d  248 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD----VFVDSTEDPDIMKAIMK-------TTD  248 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc----eeEEecCCHHHHHHHHH-------hhc
Confidence            699999999888 997766666667999999999988888888888742    223445 7766766665       346


Q ss_pred             EEEeCC
Q 024839           86 IMYSNA   91 (262)
Q Consensus        86 ~li~~a   91 (262)
                      .+++.+
T Consensus       249 g~~~~v  254 (360)
T KOG0023|consen  249 GGIDTV  254 (360)
T ss_pred             Ccceee
Confidence            666655

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.048  Score=45.89  Aligned_cols=42  Identities=29%  Similarity=0.379  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .++.||.++|.|.|.-+|+.++..|.++|++|.++......+
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            367899999999999999999999999999999886544444

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.50  E-value=0.078  Score=45.32  Aligned_cols=76  Identities=14%  Similarity=0.201  Sum_probs=50.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +++++|.|+++++|.+++......|.+|+.+.++.++.+.+ ++++..  .  ..|..+. .. +.+....  .+.+|++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~--~--v~~~~~~-~~-~~~~~~~--~~~~d~v  217 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAK--E--VIPREEL-QE-ESIKPLE--KQRWAGA  217 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCC--E--EEcchhH-HH-HHHHhhc--cCCcCEE
Confidence            67999999999999999999988999999888887776555 444421  1  1222222 11 1222221  2358998


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      +.+.|
T Consensus       218 ld~~g  222 (326)
T cd08289         218 VDPVG  222 (326)
T ss_pred             EECCc
Confidence            88765

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.48  E-value=0.23  Score=42.88  Aligned_cols=39  Identities=31%  Similarity=0.375  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+++||++-|.| .|.||+++|+++...|.+|+..+|++.
T Consensus       142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         142 FDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            468899999999 899999999999988999999988863

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.47  E-value=0.12  Score=45.95  Aligned_cols=46  Identities=24%  Similarity=0.342  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      .+.+++|+|+++++|.+++..+...|++++++.++.++.+.+. +++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g  234 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELG  234 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence            4789999999999999999888889999888877766554443 344

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.47  E-value=0.12  Score=44.12  Aligned_cols=78  Identities=22%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .+.+++|.|+++++|.+++..+...|+.++++.++.++.+.+ ..++. +   ...|..+.+.   +.+.+.+..  ..+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~-~---~~~~~~~~~~---~~~~~~~~~~~~~~  211 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAA-I---ILIRYPDEEG---FAPKVKKLTGEKGV  211 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC-c---EEEecCChhH---HHHHHHHHhCCCCc
Confidence            478999999999999999999999999988888887766555 33432 1   1122233221   222233322  258


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++++.+
T Consensus       212 d~~i~~~~  219 (334)
T PTZ00354        212 NLVLDCVG  219 (334)
T ss_pred             eEEEECCc
Confidence            99998875

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.46  E-value=0.14  Score=38.50  Aligned_cols=31  Identities=23%  Similarity=0.464  Sum_probs=26.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      +++|.|+ ||+|.++++.|+..|. ++.+++..
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788886 8999999999999997 58887654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.45  E-value=0.038  Score=46.43  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=38.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhh
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~   52 (262)
                      +|+++|.| +||.+++++..|++.|. +|.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            56899999 59999999999999997 4999999998887776654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.42  E-value=0.045  Score=43.03  Aligned_cols=42  Identities=29%  Similarity=0.351  Sum_probs=34.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      +|.|.|+ |-+|+.+|..++..|++|.+++++++.+++..+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i   42 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI   42 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence            4778886 99999999999999999999999988776655443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN02494 adenosylhomocysteinase

Probab=95.41  E-value=0.1  Score=46.94  Aligned_cols=38  Identities=34%  Similarity=0.537  Sum_probs=33.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      +.||+++|.|.+ .||+.+|+.+...|++|+++.+++.+
T Consensus       252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            679999999955 99999999999999999999887654

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.40  E-value=0.15  Score=44.36  Aligned_cols=45  Identities=29%  Similarity=0.488  Sum_probs=37.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      .|++++|.|+ +++|..++..+...|.+|+++++++++.+.+ ++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~G  210 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFG  210 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC
Confidence            4889999999 9999999998888999999998888877654 4454

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.39  E-value=0.16  Score=43.67  Aligned_cols=37  Identities=19%  Similarity=0.344  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      .+++||++.|.| .|.||+++|+.+...|.+|+..++.
T Consensus       143 ~~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        143 TDVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCC
Confidence            357899999999 6999999999999999999888764

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.38  E-value=0.13  Score=45.15  Aligned_cols=78  Identities=26%  Similarity=0.383  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||.|+ +++|...+..+...|. +|+.++++.++.+.+ ++++..  .+  .|..+. +++.+.+.++..  +.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~--~~--i~~~~~~~~~~~~v~~~~~--~~~  258 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVT--EF--VNPKDHDKPVQEVIAEMTG--GGV  258 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc--eE--EcccccchhHHHHHHHHhC--CCC
Confidence            5889999985 8999998888888898 799898888776554 445421  11  132221 234333333322  269


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++.+.|
T Consensus       259 d~vid~~G  266 (369)
T cd08301         259 DYSFECTG  266 (369)
T ss_pred             CEEEECCC
Confidence            99999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.37  E-value=0.11  Score=44.75  Aligned_cols=36  Identities=39%  Similarity=0.398  Sum_probs=33.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      .+.|||+-|.| .|.||+++|+++...|.+|+..++.
T Consensus       139 el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~  174 (324)
T COG0111         139 ELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPY  174 (324)
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC
Confidence            46799999999 7899999999999999999999983

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.37  E-value=0.098  Score=45.65  Aligned_cols=77  Identities=22%  Similarity=0.325  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|+++||.|+ +++|...+..+...|+. |+.++++.++.+.+ ++++..    ...|..+++..    +.+.+..+  .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~----~~i~~~~~~~~----~~i~~~~~~~g  245 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGAT----HTVNSSGTDPV----EAIRALTGGFG  245 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc----eEEcCCCcCHH----HHHHHHhCCCC
Confidence            4889999985 99999998888888985 88888887776554 445421    12233332222    22333222  5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.+.|.
T Consensus       246 ~d~vid~~g~  255 (358)
T TIGR03451       246 ADVVIDAVGR  255 (358)
T ss_pred             CCEEEECCCC
Confidence            9999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.35  E-value=0.17  Score=43.76  Aligned_cols=75  Identities=28%  Similarity=0.477  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.+++|+|+++++|.+++......|++|+.+.+. ++ .+..++++..    ...|..+.+..+.+    .. .+.+|+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~g~~----~~~~~~~~~~~~~l----~~-~~~vd~  230 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSLGAD----DVIDYNNEDFEEEL----TE-RGKFDV  230 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHhCCc----eEEECCChhHHHHH----Hh-cCCCCE
Confidence            48999999999999999999998899998877654 22 2333444321    12333333333322    22 246999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.+
T Consensus       231 vi~~~g  236 (350)
T cd08248         231 ILDTVG  236 (350)
T ss_pred             EEECCC
Confidence            998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.35  E-value=0.1  Score=43.98  Aligned_cols=77  Identities=25%  Similarity=0.329  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      +|++++|.|+++++|.+++......|++|+.+.++.++.+.+ ..++. + .++  +..+.+.    .+.+.+..  ..+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~-~-~~~--~~~~~~~----~~~~~~~~~~~~~  206 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGA-D-HVI--NYRDEDF----VERVREITGGRGV  206 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCC-C-EEE--eCCchhH----HHHHHHHcCCCCe
Confidence            578999999999999999999999999999888877766554 33432 1 122  2222222    22222222  259


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |.++++.+
T Consensus       207 d~vl~~~~  214 (320)
T cd05286         207 DVVYDGVG  214 (320)
T ss_pred             eEEEECCC
Confidence            99998865

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.34  E-value=0.13  Score=45.17  Aligned_cols=77  Identities=21%  Similarity=0.333  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   84 (262)
                      .|+++||.|+ +++|..++..+...|+ +|+.+++++++.+.+ ++++..    ...|..+++    +.+++.+.. +.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~----~~i~~~~~~----~~~~i~~~~~~g~  260 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGAT----ATVNAGDPN----AVEQVRELTGGGV  260 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCc----eEeCCCchh----HHHHHHHHhCCCC
Confidence            4789999985 8999998888888898 588888887776544 444421    123333322    222333322 369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus       261 d~vid~~G~  269 (371)
T cd08281         261 DYAFEMAGS  269 (371)
T ss_pred             CEEEECCCC
Confidence            999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.33  E-value=0.038  Score=46.84  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=35.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS   51 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   51 (262)
                      ++|.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            46888885 7999999999999999999999999887664433

>PRK08223 hypothetical protein; Validated

Probab=95.29  E-value=0.13  Score=43.31  Aligned_cols=36  Identities=31%  Similarity=0.416  Sum_probs=30.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .+++.+|+|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35788899998 57999999999999995 58887765

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.27  E-value=0.095  Score=44.30  Aligned_cols=42  Identities=33%  Similarity=0.450  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      .+++++|+|+++++|.+++..+...|+.|+.+.++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999988887665544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.25  E-value=0.11  Score=45.83  Aligned_cols=113  Identities=10%  Similarity=0.044  Sum_probs=67.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-e----EEE--e--eCCchhHHHHHhhhCCCc-eE--EEEecCCCHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-F----VII--A--DIQDELGNQVVSSIGPEK-AS--YRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~~-~~--~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++.|+|++|.+|.++|..|+..|. .    |.+  +  +++.+.++....++.+.- ..  -+..--.+.+         
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~---------  116 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYE---------  116 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHH---------
Confidence            799999999999999999998873 2    344  4  777777665555554321 00  0110001211         


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEecC
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTTS  144 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~isS  144 (262)
                        .+..-|++|..||..  .++  ..++   .+.+..|    ..+++...+.+.+ .+..+.+|++|-
T Consensus       117 --~~kdaDIVVitAG~p--rkp--g~tR---~dll~~N----~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 --VFEDADWALLIGAKP--RGP--GMER---ADLLDIN----GQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             --HhCCCCEEEECCCCC--CCC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence              223689999999974  222  3444   3344445    3455556666655 323677777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.25  E-value=0.099  Score=46.53  Aligned_cols=43  Identities=28%  Similarity=0.469  Sum_probs=36.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      .+.|++|+|.|+ |.||+.++..+...|++|+++++++.+...+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            357999999995 5899999999999999999999887766544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.23  E-value=0.14  Score=43.50  Aligned_cols=77  Identities=19%  Similarity=0.189  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .+.+++|.|+++++|.+++..+...|+.|+.+.++.++.+.+ ++++-.    ...|..+.+..    +.+.+..  ..+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~----~~~~~~~~~~~~  208 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGAD----EVIDSSPEDLA----QRVKEATGGAGA  208 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCC----EEecccchhHH----HHHHHHhcCCCc
Confidence            478999999999999999999999999998888887665544 444321    11222222222    2233222  259


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++.+.|
T Consensus       209 d~vl~~~g  216 (323)
T cd05282         209 RLALDAVG  216 (323)
T ss_pred             eEEEECCC
Confidence            99998876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.22  E-value=0.15  Score=44.90  Aligned_cols=36  Identities=25%  Similarity=0.492  Sum_probs=30.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .+++++|+|.| .||+|..+++.|+..|. ++++++..
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35688899998 57999999999999995 68887654

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.21  E-value=0.12  Score=44.91  Aligned_cols=74  Identities=26%  Similarity=0.452  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC---chhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ---DELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .|++++|+|+ |++|...+..+...|++|++++|+   +++. +..++++.   ..  .|..+ +++.+    . ...+.
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga---~~--v~~~~-~~~~~----~-~~~~~  238 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGA---TY--VNSSK-TPVAE----V-KLVGE  238 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCC---EE--ecCCc-cchhh----h-hhcCC
Confidence            5889999985 999999998877789999999884   3443 34445542   22  23332 22222    1 12347


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       239 ~d~vid~~g~  248 (355)
T cd08230         239 FDLIIEATGV  248 (355)
T ss_pred             CCEEEECcCC
Confidence            9999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.20  E-value=0.13  Score=44.39  Aligned_cols=77  Identities=25%  Similarity=0.342  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .+.++||.|+++++|.+++..+.+.|.+|+.+.+++++.+.+ +.++...    ..+..+.+..++    +.+..  ..+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~----v~~~~~~~~~~~----~~~~~~~~~v  235 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADA----FVDFKKSDDVEA----VKELTGGGGA  235 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcE----EEcCCCccHHHH----HHHHhcCCCC
Confidence            478999999999999999999999999999998887766544 4444211    122233222222    22222  359


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++++.+
T Consensus       236 d~vl~~~~  243 (341)
T cd08297         236 HAVVVTAV  243 (341)
T ss_pred             CEEEEcCC
Confidence            99998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07574 formate dehydrogenase; Provisional

Probab=95.18  E-value=0.3  Score=43.19  Aligned_cols=37  Identities=24%  Similarity=0.275  Sum_probs=33.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      ++.||++.|.| .|.||+++|++|...|.+|+..+|..
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCC
Confidence            57899999999 47899999999999999999998875

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.14  E-value=0.13  Score=44.64  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|++++|+|+ +++|..++..+...|+ .|++++++.++.+.+ .+++..    ...|..+.+    +.+.+.+..+  .
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~----~~i~~~~~~----~~~~l~~~~~~~~  241 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGAT----IVLDPTEVD----VVAEVRKLTGGGG  241 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC----EEECCCccC----HHHHHHHHhCCCC
Confidence            4789999985 8999999999988999 788888877776544 334321    122433332    2233333332  4


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|+++.+.|.
T Consensus       242 ~d~vid~~g~  251 (351)
T cd08233         242 VDVSFDCAGV  251 (351)
T ss_pred             CCEEEECCCC
Confidence            9999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.13  E-value=0.081  Score=36.63  Aligned_cols=42  Identities=26%  Similarity=0.312  Sum_probs=35.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcC---CeEEEe-eCCchhHHHHHhhhC
Q 024839           11 AIIMGAASGIGEATAKLFAEHG---AFVIIA-DIQDELGNQVVSSIG   53 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~   53 (262)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ .|++++.+++.++..
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            4455 69999999999999999   899866 999999888877765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN03139 formate dehydrogenase; Provisional

Probab=95.12  E-value=0.34  Score=42.80  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .++.||++.|.| .|.||+.+|+.|...|.+|+..+|+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            368999999999 68899999999999999999888764

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.11  E-value=0.17  Score=40.43  Aligned_cols=35  Identities=26%  Similarity=0.409  Sum_probs=28.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      +++++|+|.| .+|+|.++++.|+..|. ++.+++..
T Consensus        19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5678899998 55699999999999996 47787654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.08  E-value=0.068  Score=44.99  Aligned_cols=44  Identities=16%  Similarity=0.141  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ   47 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~   47 (262)
                      .++.||.++|.|-|.-+|+.++..|..+|++|.++.+....+++
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            46789999999999999999999999999999998776554443

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.07  E-value=0.19  Score=44.37  Aligned_cols=46  Identities=24%  Similarity=0.382  Sum_probs=37.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      .+.+++|+|+++++|.+++..+...|+.++.+.++.++.+.+. +++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G  238 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALG  238 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcC
Confidence            4789999999999999999888889999888888777665543 354

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PLN02827 Alcohol dehydrogenase-like

Probab=95.07  E-value=0.18  Score=44.45  Aligned_cols=79  Identities=20%  Similarity=0.347  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||.|+ +++|..++..+...|+. |+.++++.++.+.+ ++++..  .+  .|..+. +++.+.+.++..  +.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~--~~--i~~~~~~~~~~~~v~~~~~--~g~  264 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVT--DF--INPNDLSEPIQQVIKRMTG--GGA  264 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCc--EE--EcccccchHHHHHHHHHhC--CCC
Confidence            4889999985 89999999888888985 66777777665443 445421  11  233321 234333333322  369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       265 d~vid~~G~  273 (378)
T PLN02827        265 DYSFECVGD  273 (378)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.06  E-value=0.028  Score=48.10  Aligned_cols=39  Identities=31%  Similarity=0.299  Sum_probs=33.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      +++.|+| .|-+|.++|..|++.|++|++.+++++..+..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            3688998 77899999999999999999999998766543

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.05  E-value=0.046  Score=41.36  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=32.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      |+.+|+.+.+|+++|..|.++|.+|++.  +.+.-+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999988  444444444443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.05  E-value=0.089  Score=48.98  Aligned_cols=71  Identities=7%  Similarity=0.097  Sum_probs=53.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      .++|.| .+.+|+.++++|.++|++|++++.++++.++..+    .....+..|.+|++.++++--      .+.|.++-
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a~i------~~a~~viv  487 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLAHL------DCARWLLL  487 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhcCc------cccCEEEE
Confidence            466666 7889999999999999999999999888776653    246789999999877655311      15676655


Q ss_pred             CC
Q 024839           90 NA   91 (262)
Q Consensus        90 ~a   91 (262)
                      ..
T Consensus       488 ~~  489 (558)
T PRK10669        488 TI  489 (558)
T ss_pred             Ec
Confidence            43

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.03  E-value=0.3  Score=42.15  Aligned_cols=40  Identities=23%  Similarity=0.300  Sum_probs=33.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .+++|++.|.| .|.+|.++|+.|.+.|++|++..+..++.
T Consensus        14 ~L~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s   53 (330)
T PRK05479         14 LIKGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKS   53 (330)
T ss_pred             hhCCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhh
Confidence            36799999998 55899999999999999998877764433

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.02  E-value=0.14  Score=43.89  Aligned_cols=75  Identities=23%  Similarity=0.223  Sum_probs=47.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~d~   86 (262)
                      ++++++||++++|..++......|.+|+.+.++.++.+.+. +++..  .++  |..+.+..    +.+.+..  ..+|+
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~--~~i--~~~~~~~~----~~v~~~~~~~~~d~  215 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAE--YVL--NSSDPDFL----EDLKELIAKLNATI  215 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCc--EEE--ECCCccHH----HHHHHHhCCCCCcE
Confidence            44555599999999998877778999998888877665544 34421  122  22222222    2222222  25999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+.|
T Consensus       216 vid~~g  221 (324)
T cd08291         216 FFDAVG  221 (324)
T ss_pred             EEECCC
Confidence            999876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.02  E-value=0.27  Score=40.49  Aligned_cols=36  Identities=25%  Similarity=0.492  Sum_probs=30.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      .+++++|+|.| .||+|..+++.|+..|. ++++++.+
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35678899998 67999999999999995 57887765

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.02  E-value=0.12  Score=41.53  Aligned_cols=58  Identities=14%  Similarity=0.208  Sum_probs=42.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDVR   65 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~   65 (262)
                      .+++||++||.| +|.+|..-++.|.+.|++|++++.... .+.++.+   ..++.++.-+..
T Consensus         5 l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~   63 (205)
T TIGR01470         5 ANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFD   63 (205)
T ss_pred             EEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCC
Confidence            357899999999 578999999999999999999876643 3333322   235666665544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.079  Score=44.61  Aligned_cols=45  Identities=16%  Similarity=0.290  Sum_probs=38.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      .++.||.++|.|.|.-+|+-++..|.+++++|.++......+++.
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~  198 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL  198 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence            367899999999999999999999999999999886555444433

>PLN02306 hydroxypyruvate reductase

Probab=95.00  E-value=0.31  Score=43.14  Aligned_cols=38  Identities=26%  Similarity=0.404  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHH-HcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~-~~g~~V~~~~r~~~   43 (262)
                      .+.||++.|.| .|.||+++|+.|. ..|.+|+..++...
T Consensus       162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            57899999999 8899999999985 78999999987753

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.99  E-value=0.35  Score=41.33  Aligned_cols=37  Identities=27%  Similarity=0.221  Sum_probs=33.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+.||++.|.| .|.||+++|+.+...|.+|+..+|+.
T Consensus       119 ~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        119 LLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            57899999999 68999999999988899999998864

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.98  E-value=0.11  Score=44.74  Aligned_cols=36  Identities=31%  Similarity=0.517  Sum_probs=33.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      .+.||++.|.| .|.||+++|+.+...|.+|+..+|.
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence            58899999999 6999999999999999999988875

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.95  E-value=0.33  Score=41.86  Aligned_cols=37  Identities=19%  Similarity=0.156  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHH-HcCCeEEEeeCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQD   42 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~-~~g~~V~~~~r~~   42 (262)
                      .+.||++.|.| .|.||+++|+.+. ..|.+|+..++..
T Consensus       142 ~L~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~  179 (323)
T PRK15409        142 DVHHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRH  179 (323)
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            57899999999 5999999999997 7899998887763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	262
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		7e-46
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		5e-31
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-29
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		7e-28
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		5e-27
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-26
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-25
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-25
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-25
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		7e-25
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		9e-25
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-24
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-24
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-24
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-24
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-24
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-24
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-24
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-24
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-24
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-24
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-24
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-23
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-23
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-23
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		8e-23
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-22
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-22
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-22
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		6e-22
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		8e-22
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		8e-22
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		8e-22
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		9e-22
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-21
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-21
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-21
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-21
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-21
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		5e-21
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		6e-21
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		7e-21
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		7e-21
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-21
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-20
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-20
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-20
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-20
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		3e-20
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-20
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-20
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		7e-20
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-20
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-19
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-19
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-19
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-19
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-19
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-19
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		8e-19
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-18
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-18
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-18
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-18
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-18
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		5e-18
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		5e-18
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		5e-18
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		5e-18
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-18
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		5e-18
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-18
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-18
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-18
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		8e-18
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		8e-18
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-17
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-17
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-17
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-17
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-17
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-17
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-17
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		4e-17
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-17
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		6e-17
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		7e-17
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		7e-17
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-16
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-16
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-16
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-16
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		5e-16
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-16
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		5e-16
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		6e-16
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-16
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		8e-16
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		8e-16
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-15
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-15
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-15
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-15
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-15
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-15
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-15
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-15
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-15
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-15
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-15
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-15
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-15
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		3e-15
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-15
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-15
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-15
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		5e-15
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		6e-15
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		6e-15
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-15
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-14
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-14
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-14
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-14
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-14
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		4e-14
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-14
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-14
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		7e-14
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		8e-14
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		1e-13
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		1e-13
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-13
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		1e-13
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-13
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-13
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-13
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-13
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-13
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-13
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-13
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		6e-13
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		9e-13
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-12
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-12
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-12
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-12
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		4e-12
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-12
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		5e-12
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		7e-12
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-12
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		1e-11
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-11
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		1e-11
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-11
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-11
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-11
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-11
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-11
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-11
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-11
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		6e-11
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-11
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-11
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-11
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		8e-11
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		8e-11
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-10
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-10
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-10
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-10
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-10
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-10
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-10
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-10
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-10
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-10
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-10
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-10
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		4e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		4e-10
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-10
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-10
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		8e-10
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-09
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-09
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-09
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-09
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		3e-09
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		4e-09
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		7e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-08
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-08
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-08
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-08
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-08
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-08
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		3e-08
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-08
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		4e-08
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-08
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		5e-08
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		1e-07
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-07
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-07
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-07
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-07
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		4e-07
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		5e-07
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		6e-07
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		7e-07
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		8e-07
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		1e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-06
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-06
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		5e-06
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		5e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		6e-06
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		7e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		8e-06
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		9e-06
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		1e-05
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		1e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		1e-05
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		1e-05
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-05
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-05
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		2e-05
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		3e-05
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		3e-05
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		3e-05
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		4e-05
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		5e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		6e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		7e-05
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		1e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		1e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-04
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		2e-04
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		2e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-04
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		3e-04
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		4e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		4e-04
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		4e-04
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		4e-04
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		4e-04
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		4e-04
3guy_A	230	Crystal Structure Of A Short-Chain DehydrogenaseRED		5e-04
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		6e-04
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		6e-04
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		7e-04
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		7e-04
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		8e-04
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		8e-04
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  180 bits (456), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 158/268 (58%), Gaps = 8/268 (2%)
Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYR 60
           S  RLQ KVAII G A GIGE TAKLF  +GA V+IADI D+ G +V ++IG P+  S+ 
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV 69
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG-TILDLDMAQFDRTIATNLAGS 119
           HCDV  ++ V   V   I K+G LDIM+ N GV      +IL+     F R +  N+ G+
Sbjct: 70  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXX-XXXPHAYTISKHGLLGLVRSAASELGKH 178
            +  K+AARVM+  K +GSI+               H YT +KH +LGL  S  +ELG++
Sbjct: 130 FLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188
Query: 179 GIRVNCVSPFGVATPFSAGTI----NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           GIRVNCVSP+ VA+P          + VE    + ANLKG +L+A+ VA+A  +LA DES
Sbjct: 189 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 248
Query: 235 AYVSGHDLVVDGGFTAVTNVMSMLEGHG 262
            YVSG +LV+DGG+T           HG
Sbjct: 249 KYVSGLNLVIDGGYTRTNPAFPTALKHG 276

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 19/259 (7%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSI 52
           M   RL+GK+AI+ GA+SGIG A A LFA  GA V++        A++ DE+      + 
Sbjct: 1   MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA- 59
Query: 53  GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
                +    DV DE   E  V  A+ ++G LD  ++NAG  G +G I  L +  +  T+
Sbjct: 60  -----AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETL 114
Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
            TNL  + +A KY    + A                        Y  SK GL+GLV++ A
Sbjct: 115 DTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALA 174
Query: 173 SELGKHGIRVNCVSPFGVATPFS----AGTINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
            ELG  GIRVN + P G  TP +     G   +  GFV  +  LK I  + + +AEAAL+
Sbjct: 175 VELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIA-RPEEIAEAALY 233
Query: 229 LASDESAYVSGHDLVVDGG 247
           LASD +++V+G  L+ DGG
Sbjct: 234 LASDGASFVTGAALLADGG 252

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 8/247 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L  +V I+ G  SGIG ATA+LFA++GA+V++AD+ ++   +V + IG +    R  DV 
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR-VDVS 83
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
             K  E  V     K+G +D++ +NAG  G  G ++ +    +DR  + N+ G  +  KY
Sbjct: 84  SAKDAESXVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIXSVNVKGIFLCSKY 142
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
              V   N   GSII               AY  SK  +  L R+ A +  K GIRVN V
Sbjct: 143 VIPVXRRNG-GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAV 201
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYVSGH 240
           +P  + +P+      + +      ++     +      A+ +AEA LFLASD S + +G 
Sbjct: 202 APGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGS 261
Query: 241 DLVVDGG 247
            L VDGG
Sbjct: 262 ILTVDGG 268

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 9/246 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKVA++ G A G+G +  +     GA V+  DI DE G + +++   + A Y H DV
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG-KAMAAELADAARYVHLDV 62
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
               Q +  V  A+  +G L ++ +NAG+   +GTI D  + ++ R +  NL G  + ++
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
              + M     RGSII              H YT +K  + GL +S A ELG  GIRVN 
Sbjct: 122 AVVKPM-KEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           + P  V TP +     D+  F   +    G   +   V+   ++LASDES+Y +G + VV
Sbjct: 181 IHPGLVKTPMTDWVPEDI--FQTAL----GRAAEPVEVSNLVVYLASDESSYSTGAEFVV 234
Query: 245 DGGFTA 250
           DGG  A
Sbjct: 235 DGGTVA 240

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHC 62
           L+ KV I+ GA SGIG A AK FA + + V+  ++ ++  NQ+V  +   G E    +  
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK-A 63
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV  +K VEE V    E Y  +D++ +NAG+   V  + ++    ++R +A NL  +  +
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +    +M+    +G I+                YT++KHGL+GL RS A+  G  GIR 
Sbjct: 124 SRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 183 NCVSPFGVATPFSAGTINDVE---GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
             V P  V T    G+    E     + K+ +L   + + + +A   +FLASDE+++V+G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242
Query: 240 HDLVVDGGFTAV 251
             +VVDGG T +
Sbjct: 243 DAVVVDGGLTVL 254

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 121/246 (49%), Gaps = 9/246 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKVA++ G A G G +  +     GA V+  DI DE G +  ++   + A Y H DV
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEG-KAXAAELADAARYVHLDV 62
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
               Q +  V  A+  +G L ++ +NAG+   +GTI D  + ++ R +  NL G  + ++
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
              +       RGSII              H YT +K  + GL +S A ELG  GIRVN 
Sbjct: 122 AVVK-PXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           + P  V TP +     D+  F   +    G   +   V+   ++LASDES+Y +G + VV
Sbjct: 181 IHPGLVKTPXTDWVPEDI--FQTAL----GRAAEPVEVSNLVVYLASDESSYSTGAEFVV 234
Query: 245 DGGFTA 250
           DGG  A
Sbjct: 235 DGGTVA 240

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 126/246 (51%), Gaps = 8/246 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK  II G A G+G   A+     GA V++AD+ DE G      +G + A Y+H DV 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVT 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-MAQFDRTIATNLAGSVMAVK 124
            E+  +  VAYA E++GS+D + +NAG++   G  L+ + + +F + +  NL G  + +K
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M  +   GSI+               +Y  SK G+ GL + AA ELG   IRVN 
Sbjct: 120 TVIPAM-KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 185 VSPFGVATPFSAGT-INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V P    TP +A T I   EG         G V +   +A A + L SD S+YV+G +L 
Sbjct: 179 VHPGMTYTPMTAETGIRQGEGNYPNTP--MGRVGEPGEIAGAVVKLLSDTSSYVTGAELA 236
Query: 244 VDGGFT 249
           VDGG+T
Sbjct: 237 VDGGWT 242

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 9/256 (3%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M+ P L GKVAI+ GA +GIG A A+  A+ G  V+ ADI  +  +   + IG   A+ R
Sbjct: 22  MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR 81
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV DE+Q+   V   +  +G +D + +NAGV   + +++D  +  FDR IA NL G+ 
Sbjct: 82  -VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAW 139
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  K+AA  M+  +  G+I+               AY +SK G++ L R  A+EL   GI
Sbjct: 140 LCTKHAAPRMI-ERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFV------CKVANLKGIVLKAKHVAEAALFLASDES 234
           R N + P  V TP     +   +G +        +A L+G +   + +A   +FL SD++
Sbjct: 199 RSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA 258
Query: 235 AYVSGHDLVVDGGFTA 250
           + ++G   + DGG  A
Sbjct: 259 SMITGTTQIADGGTIA 274

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 128/251 (50%), Gaps = 17/251 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK  II G A G+G   A+     GA V++AD+ DE G      +G + A Y+H DV 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVT 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-MAQFDRTIATNLAGSVMAVK 124
            E+  +  VAYA E++GS+D + +NAG++   G  L+ + + +F + +  NL G  + +K
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M  +   GSI+               +Y  SK G+ GL + AA ELG   IRVN 
Sbjct: 120 TVIPAM-KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 185 VSPFGVATPFSAGT-INDVEGF-----VCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           V P    TP +A T I   EG      + +V N  G       +A A + L SD S+YV+
Sbjct: 179 VHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG------EIAGAVVKLLSDTSSYVT 232
Query: 239 GHDLVVDGGFT 249
           G +L VDGG+T
Sbjct: 233 GAELAVDGGWT 243

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 134/253 (52%), Gaps = 15/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGN--QVVSSIGPEKASYRH 61
           L+GKV +I G+++G+G++ A  FA   A V++     +DE  +  + +  +G E  + + 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK- 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E  V   V  AI+++G LD+M +NAG+A PV +  ++ ++ +++ I TNL G+ +
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKVIDTNLTGAFL 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAY 236
           VN + P  + TP +A    D E    + A+++     G + + + +A  A +LAS E++Y
Sbjct: 183 VNNIGPGAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 237 VSGHDLVVDGGFT 249
           V+G  L  DGG T
Sbjct: 239 VTGITLFADGGMT 251

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 13/249 (5%)
Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           GK  ++ G A GIG A A+ FA  GA V + D++ E G +V  +IG    ++   D+ DE
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG---GAFFQVDLEDE 61
Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
           ++    V  A    G +D++ +NA +A P G+ L + + ++ R +  NL   +     AA
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLSALAA 120
Query: 128 RVMVANKIRG-SIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
           R M   K+ G +I+               AY  SK GL+ L RS A +L    IRVN V+
Sbjct: 121 REM--RKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178
Query: 187 PFGVATPFSAGTI---NDVEGFVCKVANLKGI--VLKAKHVAEAALFLASDESAYVSGHD 241
           P  +AT      I    D E       +L  +  + K + VAEA LFLAS+++++++G  
Sbjct: 179 PGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAI 238
Query: 242 LVVDGGFTA 250
           L VDGG TA
Sbjct: 239 LPVDGGMTA 247

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV-SSIGPE--------- 55
           LQG+VA I GAA G G + A   A  GA +I  DI   +   V  +   PE         
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                KA  R  DVRD+  + E VA  +E++G LD++ +NAGV    G + +L   Q+D 
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDT 131
Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRS 170
            I  NL G+   ++     M+     GSI+                Y+ SKHGL  L  +
Sbjct: 132 VIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNT 191
Query: 171 AASELGKHGIRVNCVSPFGVATPF---------SAGTINDVEGFVCKVANLKGIVLKAKH 221
            A ELG++GIRVN + P+ V TP           A   + V  F        G  + A  
Sbjct: 192 LAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGF-MTADE 250
Query: 222 VAEAALFLASDESAYVSGHDLVVDGG 247
           VA+   +LA D S  ++G  + VD G
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 127/248 (51%), Gaps = 9/248 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK  ++ GAASGIG A   LFA  GA ++  D ++E       +    +A     DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVD-REERLLAEAVAALEAEAIAVVADV 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D K VE   A A+E++G L  +   AGVA    +  +L +  +++ +  NL GS +  +
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS-WNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A  V+      GS++              H Y   K G++GL R+ A EL + G+RVN 
Sbjct: 121 KAGEVLEEG---GSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 185 VSPFGVATPFSAGTINDVEGFVCKV-ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           + P  + TP +AG       +  +V A+  G   + + VA+AALFL S+ESAY++G  L 
Sbjct: 177 LLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY 234
Query: 244 VDGGFTAV 251
           VDGG + V
Sbjct: 235 VDGGRSIV 242

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 134/253 (52%), Gaps = 15/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGN--QVVSSIGPEKASYRH 61
           L+GKV +I G+++G+G++ A  FA   A V++     +DE  +  + +  +G E  + + 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK- 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E  V   V  AI+++G LD+M +NAG+  PV +  ++ ++ +++ I TNL G+ +
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTGAFL 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  + ++ A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAY 236
           VN + P  + TP +A    D E    + A+++     G + + + +A  A +LAS E++Y
Sbjct: 183 VNNIGPGAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 237 VSGHDLVVDGGFT 249
           V+G  L  DGG T
Sbjct: 239 VTGITLFADGGMT 251

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY----- 59
           RLQGKVA I GAA G G   A   A+ GA ++  D+  +  N   +   PE+        
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 60  ---------RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                    R  DVRD   ++  V  A+ ++G +DI+ SN G++   G ++ L   Q+  
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQ-GEVVSLTDQQWSD 161
Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRS 170
            + TNL G+  A +     M+     GS+I                Y  SKHG+ GL+ S
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLS 221
Query: 171 AASELGKHGIRVNCVSPFGVATPFSAG--------------TINDVEGFVCKVANLKGIV 216
            A+E+G+H IRVN V+P  V T  +                T  D      ++  L    
Sbjct: 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           ++ + V+ A  +LASDE+ Y+ G  + VDGG  A
Sbjct: 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK A++ GAA GIG+A A   A  GA VI++DI  E      +SIG +KA     D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAADI 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   V+   A      G +DI+ +NA +  P     D+D+  + + I  NL G+ +  +
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M A    G +I               AY  +K G++G  R+ A+ELGK+ I  N 
Sbjct: 121 AGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANA 180
Query: 185 VSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V+P  + +    A   N+  GFV  +  +KG   + +H+A+   FLASD++ +++G  L 
Sbjct: 181 VTPGLIESDGVKASPHNEAFGFVEMLQAMKG-KGQPEHIADVVSFLASDDARWITGQTLN 239
Query: 244 VDGGF 248
           VD G 
Sbjct: 240 VDAGM 244

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGN--QVVSSIGPEKASYRH 61
           L+GKV +I G+++G+G++ A  FA   A V++     +DE  +  + +  +G E  + + 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK- 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E  V   V  AI+++G LD+M +NAG+  PV +  ++ ++ +++ I TNL G+ +
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTGAFL 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAY 236
           VN + P  + TP +A    D E    + A+++     G + + + +A  A +LAS E++Y
Sbjct: 183 VNNIGPGAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 237 VSGHDLVVDGGFT 249
           V+G  L  DGG T
Sbjct: 239 VTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGN--QVVSSIGPEKASYRH 61
           L+GKV +I G+++G+G++ A  FA   A V++     +DE  +  + +  +G E  + + 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK- 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E  V   V  AI+++G LD+M +NAG+  PV +  ++ ++ +++ I TNL G+ +
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTGAFL 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAY 236
           VN + P  + TP +A    D E    + A+++     G + + + +A  A +LAS E++Y
Sbjct: 183 VNNIGPGAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 237 VSGHDLVVDGGFT 249
           V+G  L  DGG T
Sbjct: 239 VTGITLFADGGMT 251

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----GNQVVSSIGPEKASYRH 61
           L+ KV +I G ++G+G A A  F +  A V+I    +E       + V   G + A    
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ-AIIVQ 71
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E+ V   V  AI+++G+LD+M +NAGV  PV +  +L +  +++ I TNL G+ +
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNLTGAFL 130
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 182 VNCVSPFGVATPFSAGTI------NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           VN + P  + TP +A          DVE  +       G + K + VA  A FLAS +++
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIP-----MGYIGKPEEVAAVAAFLASSQAS 245
Query: 236 YVSGHDLVVDGGFT 249
           YV+G  L  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----GNQVVSSIGPEKASYRH 61
           L+ KV +I G ++G+G A A  F +  A V+I    +E       + V   G + A    
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ-AIIVQ 71
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E+ V   V  AI+++G+LD+M +NAGV  PV +  +L +  +++ I TNL G+ +
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNLTGAFL 130
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 182 VNCVSPFGVATPFSAGTI------NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           VN + P  + TP +A          DVE  +       G + K + VA  A FLAS +++
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIP-----MGYIGKPEEVAAVAAFLASSQAS 245
Query: 236 YVSGHDLVVDGGFT 249
           YV+G  L  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----GNQVVSSIGPEKASYRH 61
           L+ KV +I G ++G+G A A  F +  A V+I    +E       + V   G + A    
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ-AIIVQ 71
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV  E+ V   V  AI+++G+LD+M +NAGV  PV +  +L +  +++ I TNL G+ +
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNLTGAFL 130
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A +  V N I+G++I                Y  SK G+  +  + A E    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 182 VNCVSPFGVATPFSAGTI------NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           VN + P  + TP +A          DVE  +       G + K + VA  A FLAS +++
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRADVESMIP-----MGYIGKPEEVAAVAAFLASSQAS 245
Query: 236 YVSGHDLVVDGGFT 249
           YV+G  L  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRH 61
           R   +V +I G  SG+G ATA   A  GA + + D+  E        V    P+      
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 62  -CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV DE QVE  V    E++G +D  ++NAG+ G          A+FD+ ++ NL G  
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           + ++   ++M   +  G ++                Y  +KHG++GL R++A E G++GI
Sbjct: 130 LGLEKVLKIM-REQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-------KAKHVAEAALFLASDE 233
           R+N ++P  + TP    ++  ++    + A  + I +       +A  +A    FL SD+
Sbjct: 189 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 248
Query: 234 SAYVSGHDLVVDGGFTA 250
           ++YV+   + +DGG +A
Sbjct: 249 ASYVNATVVPIDGGQSA 265

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 4/244 (1%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK A++ GAA GIG+A A   A  GA VI++DI  E      +SIG +KA     D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAADI 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   V+   A      G +DI+ +NA +  P     D+D+  + + I  NL G+ +  +
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                  A    G +I               AY  +K G++G  R+ A+ELGK+ I  N 
Sbjct: 121 AGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANA 180
Query: 185 VSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V+P  + +    A   N+  GFV  +   KG   + +H+A+   FLASD++ +++G  L 
Sbjct: 181 VTPGLIESDGVKASPHNEAFGFVEXLQAXKG-KGQPEHIADVVSFLASDDARWITGQTLN 239
Query: 244 VDGG 247
           VD G
Sbjct: 240 VDAG 243

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 16/251 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSI---GPEKASYRH 61
           L+GKVA++ GA+ GIG A A   A+ GA V++    +E   N+VV  I   G +  + R 
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR- 60
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV + + V   V   ++ +G +DI+ +NAGV      ++ +   ++D  I TNL G  +
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVINTNLKGVFL 119
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             K  +R M+  +  G I+                Y  +K G++GL +++A EL    I 
Sbjct: 120 CTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYV 237
           VN ++P  +AT  +     DV     K   LK I      +A+ +A A  F ASD+S Y+
Sbjct: 179 VNAIAPGFIATDMT-----DVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYI 233
Query: 238 SGHDLVVDGGF 248
           +G  L VDGG 
Sbjct: 234 TGQTLNVDGGM 244

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK A+I G+A GIG A A+ +   GA V IADI  E      + IGP   +    DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI-ALDV 60
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D+  ++  VA  ++++GS+DI+ +NA +   +  I+++    +DR  A N++G++  ++
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR M+A    G II                Y  +K  ++ L +SA   L +HGI VN 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK--------------GIVLKAKHVAEAALFLA 230
           ++P  V      G    V+       NL               G + +A+ +   A+FLA
Sbjct: 180 IAPGVVDGEHWDG----VDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA 235
Query: 231 SDESAYVSGHDLVVDGG 247
           + E+ Y+      VDGG
Sbjct: 236 TPEADYIVAQTYNVDGG 252

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           R++GKVA + GAA G G + A   A+ GA +I  DI   +   VV +  P          
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 56  ----KASYRH-----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMA 106
               K   R       DVRD   ++  V   +E+ G LDI+ +NAG+     T+      
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 107 QFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLG 166
            +   I  NLAG    VK     M+A    GSII                Y  +KHG++G
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 167 LVRSAASELGKHGIRVNCVSPFGVATPF--SAGTIN----DVEG-------FVCKVANLK 213
           L+R+   ELG+H IRVN V P  V TP   + GT      D+E         +C++ +  
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247
Query: 214 GI-VLKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
            I  ++   ++ A LF ASDE+ Y++G  L +D G
Sbjct: 248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           L+ KV I+ GA+ GIG A A+ F + G+ VI   I D           P +A Y H  CD
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V +  QV+ ++ +  ++YGS+ ++ +NAG+    G I  + M ++ R I  NL G   A 
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K+A   M+ ++   SI+               AY  SKH ++GL +S A +     +R N
Sbjct: 114 KFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 171
Query: 184 CVSPFGVATPF--SAGTIN------DVEGFVCKVANLKGI--VLKAKHVAEAALFLASDE 233
            V P  + TP    A  +        +E  + +  +   +  + K + VA A  FLAS E
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231
Query: 234 SAYVSGHDLVVDGGFT 249
           +++++G  L VDGG +
Sbjct: 232 ASFITGTCLYVDGGLS 247

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           L+ KV I+ GA+ GIG A A+ F + G+ VI   I D           P +A Y H  CD
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 61
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V +  QV+ ++ +  ++YGS+ ++ +NAG+    G I  + M ++ R I  NL G   A 
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYAS 120
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K+A   M+ ++   SI+               AY  SKH ++GL +S A +     +R N
Sbjct: 121 KFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 178
Query: 184 CVSPFGVATPF--SAGTIN------DVEGFVCKVANLKGI--VLKAKHVAEAALFLASDE 233
            V P  + TP    A  +        +E  + +  +   +  + K + VA A  FLAS E
Sbjct: 179 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 238
Query: 234 SAYVSGHDLVVDGGFT 249
           +++++G  L VDGG +
Sbjct: 239 ASFITGTCLYVDGGLS 254

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 127/274 (46%), Gaps = 34/274 (12%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-------------QDELGNQV--V 49
           +++GKVA I GAA G G + A   A  GA +I  D+              D+L   V  V
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 50  SSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
            ++G  +      DVRD   ++  V   + + G LDI+ +NA +A     +  +D   + 
Sbjct: 85  EALG-RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWR 143
Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVR 169
             I  NL G+ +  + A   ++A K  GSI+                Y  SKHGL GL+R
Sbjct: 144 DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMR 203
Query: 170 SAASELGKHGIRVNCVSPFGVATP----------FSAGTIND-VEGFVCKVANLKGIVLK 218
           + A ELG   IRVN V P  VATP          F     N  VE F  +VA+ +  VL 
Sbjct: 204 TMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF--QVASRQMHVLP 261
Query: 219 AKHV-----AEAALFLASDESAYVSGHDLVVDGG 247
             +V     + A LFL SD++ Y++G  L VDGG
Sbjct: 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 7/248 (2%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+ KVAII GA  GIG  T+++ A  GA V++AD+ +       +S+G   A +   D+ 
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-RGAVHHVVDLT 67
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATNLAGSVMAVK 124
           +E  V   + + I+ +G LDI+ +NA  + P   ++  + +  +D T   N  G+++  K
Sbjct: 68  NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCK 127
Query: 125 YA-ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           YA  R++ A    G+I+               AY  +K  +  L R  A++ G+HG+R N
Sbjct: 128 YAIPRLISAGG--GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCN 185
Query: 184 CVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            ++P  V TP    G    +   +    +L G + +   +AE   FLASD +A+++G  +
Sbjct: 186 AIAPGLVRTPRLEVGLPQPIVD-IFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVI 244
Query: 243 VVDGGFTA 250
             D G  A
Sbjct: 245 AADSGLLA 252

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI---QDELG------NQVVSSIGPEK 56
            +GK A+I G A G+G + A   AE GA + I D     D +G      + +  ++   +
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 57  ASYRHC-----DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRT 111
            + R C     DV+D   +E  VA A +  G +DI  +NAG++  +  + +++ AQ+D  
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEV 126
Query: 112 IATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSA 171
           I TNL G+   +   A  M+  +  G I+               +Y  SK G++GL + A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMI-KRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA 185
Query: 172 ASELGKHGIRVNCVSPFGVATPFSAG--------------TINDVEGFVCKVANLKGIVL 217
           A +L  +GI VN V+P  + TP +                T+ DVE     +       L
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL 245
Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           K + V  A LFL  + S++++G  L +D G TA
Sbjct: 246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+ K  +I GAA GIG AT +LFA+ GA ++  DI++    +   ++G         DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV---XDV 58
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   VE   A A+   G LD +   AG+           +  ++  +  NL GS +  K
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGITRD-NFHWKXPLEDWELVLRVNLTGSFLVAK 117
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AA      K  GSI+              + Y  S  G++GL R+ A ELG+ GIRVN 
Sbjct: 118 -AASEAXREKNPGSIVLTASRVYLGNLGQAN-YAASXAGVVGLTRTLALELGRWGIRVNT 175
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           ++P  + T  +A     V         L G   K   VA AALFL SDES++++G  L V
Sbjct: 176 LAPGFIETRXTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFITGQVLFV 234
Query: 245 DGGFT 249
           DGG T
Sbjct: 235 DGGRT 239

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV-VSSIGPE-------- 55
           +L+G+VA I GAA G G A A   A  GA +I  DI  +L + V      P+        
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67
Query: 56  -KASYRH-----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
            +A+ R       D RD  ++ + V   +   G LDI+ +NAGVA P     D+    F 
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP-QAWDDITPEDFR 126
Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVR 169
             +  N+ G+   V   A  ++     GSII                YT SKH + GL R
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186
Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN---------LKGIVLKAK 220
           + A+ELGKH IRVN V P  V TP  +G +    G   +            L   V + +
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPE 246
Query: 221 HVAEAALFLASDESAYVSGHDLVVDGGFT 249
            +A+   +LASDES  V+   + VD G T
Sbjct: 247 DIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 16/262 (6%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV-------SSIGPEKA 57
           RL+  +A++ GA SGIG A +   A  GA V   D+      + V       S  GP + 
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 58  SYR--HCDV---RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
           ++     DV   R  + + E V     +  S  ++ S AG+      +L +    +D+ I
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPS--VVVSCAGITQDE-FLLHMSEDDWDKVI 120
Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
           A NL G+ +  + AA+ +V+N  RGSII                Y  SK G++GL ++AA
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 180
Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD 232
            ELG+HGIR N V P  +ATP +      V   + ++  + G +   + VA+   FLAS+
Sbjct: 181 RELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPM-GHLGDPEDVADVVAFLASE 239
Query: 233 ESAYVSGHDLVVDGGFTAVTNV 254
           +S Y++G  + V GG     N+
Sbjct: 240 DSGYITGTSVEVTGGLFMAENL 261

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
           L GK A+I GA++GIG+  A  +AE GA V +A    D    + +++    G  KA    
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG--KALPIR 87
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV    QV   +     + G +DI   NAG+   V  +LD+ + +F R   TN+ G  +
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFL 146
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA--YTISKHGLLGLVRSAASELGKHG 179
             + AAR MV   + G+II                  Y  SK  ++ L ++ A EL  H 
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           IRVN VSP  + T      + D          L G + + + +    L+LAS  S+Y++G
Sbjct: 207 IRVNSVSPGYIRTELVE-PLADYHALWEPKIPL-GRMGRPEELTGLYLYLASAASSYMTG 264
Query: 240 HDLVVDGGFT 249
            D+V+DGG+T
Sbjct: 265 SDIVIDGGYT 274

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 14/250 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           L  KVA++  +  GIG A A+  A+ GA V+++  + +  +Q V+++  E  S     C 
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 72
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V   +  E  VA A++ +G +DI+ SNA V    G+I+D+    +D+T+  N+    +  
Sbjct: 73  VGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMT 132
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K     M   +  GS++                Y +SK  LLGL ++ A EL    IRVN
Sbjct: 133 KAVVPEM-EKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN 191
Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA------ALFLASDESAYV 237
           C++P  + T FS     D E    K  ++K   L+ + + E         FL S++++Y+
Sbjct: 192 CLAPGLIKTSFSRMLWMDKE----KEESMKE-TLRIRRLGEPEDCAGIVSFLCSEDASYI 246
Query: 238 SGHDLVVDGG 247
           +G  +VV GG
Sbjct: 247 TGETVVVGGG 256

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 22/262 (8%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSS-IGPEKASY 59
           R   KVAII G+++GIG ATA LFA  GA V I    A+  +E   Q++++ +  +  + 
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP-----VGTILDLDMAQFDRTIAT 114
              DV  +   +E ++  + K+G LDI+ +NAG A P      GT   ++   +D T+  
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIE--SYDATLNL 120
Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           NL   +   K A   + + K     I             P+ Y+I+K  +    R+ A +
Sbjct: 121 NLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY-YSIAKAAIDQYTRNTAID 179
Query: 175 LGKHGIRVNCVSPFGVATPFSA--GTINDV-EGFVCKVANLK-----GIVLKAKHVAEAA 226
           L +HGIRVN +SP  VAT F +  G   +  + F   +A +K     G++ + + +AE  
Sbjct: 180 LIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI 239
Query: 227 LFLASDE-SAYVSGHDLVVDGG 247
            FLA  + S+Y+ GH LVVDGG
Sbjct: 240 AFLADRKTSSYIIGHQLVVDGG 261

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRH 61
           RL GK AII GA +GIG+  A  FA  GA V+++DI  +  N VV  I   G +  + R 
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR- 66
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CD+  E+++     +AI K G +DI+ +NAG  GP     D+ MA F R    N+     
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFH 124
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +  A  M  N   G I+               +Y  SK     LVR+ A +LG+  IR
Sbjct: 125 LSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183
Query: 182 VNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           VN ++P  + T      I  ++E  + +   ++ +  + + +A AALFL S  +++VSG 
Sbjct: 184 VNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-QPQDIANAALFLCSPAASWVSGQ 242
Query: 241 DLVVDGG 247
            L V GG
Sbjct: 243 ILTVSGG 249

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 118/257 (45%), Gaps = 17/257 (6%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI--QDELGNQVVSSIGPEKASYRH--CDV 64
           K A+I G+ SGIG A A+  A+ GA +++      DE+        G    +  H   D 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADX 85
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
               ++ +  A   +++G  DI+ +NAGV   V  I D  + Q+DR IA NL+ S   ++
Sbjct: 86  TKPSEIADXXAXVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIR 144
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             A      K  G II               AY  +KHG+ GL ++ A E+ + G+ VN 
Sbjct: 145 -GAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNS 203
Query: 185 VSPFGVATPFSAGTIND-------VEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
           + P  V TP     I D        E  V     LKG   K     + VA  AL+LA D+
Sbjct: 204 ICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYLAGDD 263
Query: 234 SAYVSGHDLVVDGGFTA 250
           +A ++G  +  DGG+TA
Sbjct: 264 AAQITGTHVSXDGGWTA 280

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 17/257 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYRHC 62
           L+GK+A++ GA+ GIG A A  +A+ GA ++  DI  EL   G     + G     Y  C
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYV-C 90
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV DE  ++  VA    + G +DI+ +NAG+   V  ++++  AQF + I  +L    + 
Sbjct: 91  DVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV-PMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K     M+  K  G II               AY  +K GL  L ++ ASE G+  I+ 
Sbjct: 150 SKAVIPSMI-KKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 208
Query: 183 NCVSPFGVATPFSA--------GTINDVEGFVCKVANLKGIVL-KAKHVAEAALFLASDE 233
           N + P  +ATP +A        G+ +  + F+  +A        +A+ +   A+FLASD 
Sbjct: 209 NGIGPGYIATPQTAPLRELQKDGSRHPFDQFI--IAKTPAARWGEAEDLMGPAVFLASDA 266
Query: 234 SAYVSGHDLVVDGGFTA 250
           S +V+GH L VDGG  A
Sbjct: 267 SNFVNGHILYVDGGILA 283

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 8/255 (3%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           M K RL  +VAI+ G A  IG A     AE GA VIIAD+ + +  + V  +  E    S
Sbjct: 6   MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVS 65
Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV + + V+  V    E+ G +DI+ + AG+        D+   Q+ + +  NL G
Sbjct: 66  SVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPH---AYTISKHGLLGLVRSAASEL 175
              + +   R+M+  K    +I             P    AY  SK G+   +RS A+E 
Sbjct: 126 MFRSCQAVGRIMLEQK--QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEW 183
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDES 234
             HGIR N V+P  + T  +   +   E +   +A    G V +   VA    FLASD +
Sbjct: 184 APHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAA 243
Query: 235 AYVSGHDLVVDGGFT 249
           + ++G  + VD GFT
Sbjct: 244 SLMTGAIVNVDAGFT 258

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 4/249 (1%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCD 63
           RL GKVAII G   GIG A A  F E GA V+I D   ++G +   S+G P++  +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             DE    +      + +G +  + +NAG+A    ++ +   A++ + +A NL G     
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE--LGKHGIR 181
           +   + M    +  SII               AY  SK  +  + +SAA +  L  + +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V P  + TP         E    +     G + +   +A   ++LAS+ES + +G +
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE 241
Query: 242 LVVDGGFTA 250
            VVDGG+TA
Sbjct: 242 FVVDGGYTA 250

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVR 65
           +VAI+ GA+SG G A A  F   G  V   D+  E   +   +      +K      DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSVMAV 123
           DE  V   +A  +E++G++D++ +NAG+ G    G +    + QFD+ +A N+ G  +  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXP--HAYTISKHGLLGLVRSAASELGKHGIR 181
           +     M+   ++G+ +             P   AYT SK  +L L +S A +    GIR
Sbjct: 123 RAVLPHML---LQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANL-KGIVLKAKHVAEAALFLASDESAYVSGH 240
            N V P  + TP +   ++  E     +A + +  +  A  VA+A +FLA +++ YV+G 
Sbjct: 180 CNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA 239
Query: 241 DLVVDGGFTAV 251
            LV+DG +TA+
Sbjct: 240 ALVMDGAYTAI 250

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMALNVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NAG+      ++ +   ++   + TNL       K 
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K +G II                Y  +K G++G  +S A E+   G+ VN V
Sbjct: 128 VLRGMM-KKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTV 186
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 187 APGAIETDMTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 246 GGF 248
           GG 
Sbjct: 246 GGM 248

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 13/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQD--ELGNQVVSSIGPEKASYRH 61
           L+G+VA++ G + G+G   A+  AE G  V++A  ++++  E   ++    G E  ++R 
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR- 77
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV + ++V++ +    EK+G LD + + AG+        +  + +F + I  NL G+  
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYY 136
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A  ++  +     I                AY  SK G+  L ++ A E G++GIR
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE----AALFLASDESAYV 237
           VN ++P    T  +    +D E        LK I L    V E     A+FLAS+E+ YV
Sbjct: 197 VNVIAPGWYRTKMTEAVFSDPEKLDYM---LKRIPLGRTGVPEDLKGVAVFLASEEAKYV 253
Query: 238 SGHDLVVDGGFTA 250
           +G  + VDGG+TA
Sbjct: 254 TGQIIFVDGGWTA 266

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 116/271 (42%), Gaps = 28/271 (10%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR---- 60
           R+ GKVA I GAA G G + A   A+ GA +I  DI   + N       PE  +      
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 61  ----------HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                       DVRD + ++  V   +E+ G LDI+ +NAGV      +  +    +  
Sbjct: 72  KDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQD 131
Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRS 170
            I  NL G    VK     +++    GSI+                Y  +KHG++GL+R+
Sbjct: 132 MIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRA 191
Query: 171 AASELGKHGIRVNCVSPFGVATP----------FSAGTIN----DVEGFVCKVANLKGIV 216
            A ELG H IRVN V P  V+T           F     N    D       +  L    
Sbjct: 192 FAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPW 251
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
           + A  ++ A LFLASDES YV+G  L VD G
Sbjct: 252 VDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMALNVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NAG+      ++ +   ++   + TNL       K 
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K +G II                Y  +K G++G  +S A E+   G+ VN V
Sbjct: 128 VLRGMM-KKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTV 186
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 187 APGFIETDMTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 246 GGF 248
           GG 
Sbjct: 246 GGM 248

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 127/284 (44%), Gaps = 47/284 (16%)
Query: 2   SKPR-----LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN---------- 46
           S PR     L GKVA I GAA G G A A   A  GA +I  D+ D++ +          
Sbjct: 2   SMPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEE 61
Query: 47  -----QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL 101
                ++V  IG  +   R  DVRD + +   +   +++ G LDI+ +NAG+A P+    
Sbjct: 62  LAATVKLVEDIG-SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA-PMSAGD 119
Query: 102 DLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSI--ICXXXXXXXXXXXXPHA--Y 157
           D     +   I  NL G    +K A   +V     GSI  I             P +  Y
Sbjct: 120 D----GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGY 175
Query: 158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGI 215
             +KHG++GL+R  A+ L    IRVN + P GV TP     IN+     ++ K+A     
Sbjct: 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM----INNEFTREWLAKMAAATDT 231
Query: 216 -----------VLKAKHVAEAALFLASDESAYVSGHDLVVDGGF 248
                      VL  + VA A  +L SD++ Y++G  L VD GF
Sbjct: 232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RLQGKVA++ G ASG+G    KL    GA V  +DI +  G Q+ + +G      RH DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH-DV 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E      +A    + G+L+++ +NAG+  P G +    +  F R +  N     +  +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG--IRV 182
                M   +  GSII                Y+ SK  +  L R+AA    K G  IRV
Sbjct: 121 QGIAAM--KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVA------NLKGIVLKAKHVAEAALFLASDESAY 236
           N + P G+ TP    ++   +G   ++       N  G     + +A+  LFLASDES+ 
Sbjct: 179 NSIHPDGIYTPMMQASLP--KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV 236
Query: 237 VSGHDLVVD 245
           +SG +L  D
Sbjct: 237 MSGSELHAD 245

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
            +GK+A++ GA+ GIG A A+  A  GA VI      E G Q +S            +V 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKGLMLNVT 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   +E  +     ++G +DI+ +NAG+      ++ +   +++  I TNL+      K 
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K  G II                Y  +K GL+G  +S A E+   GI VN V
Sbjct: 121 VMRAMM-KKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 186 SPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           +P  + T  +    +D   G + +V    G +  A+ +A A  FLASDE+AY++G  L V
Sbjct: 180 APGFIETDMTRALSDDQRAGILAQVP--AGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 245 DGGFTAV 251
           +GG   V
Sbjct: 238 NGGMYMV 244

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMALNVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NAG+      ++ +   ++   + TNL       K 
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K +G II                +  +K G++G  +S A E+   G+ VN V
Sbjct: 128 VLRGMM-KKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTV 186
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 187 APGFIETDMTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 246 GGF 248
           GG 
Sbjct: 246 GGM 248

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           +L+GK AI+ G++ G+G+A A      GA +++       G+   +S+      ++    
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN------GSPASTSLDATAEEFKAAGI 55
Query: 63  -------DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
                  DV++ + VE  V  A++ +G +DI+ +NAG+      +L +    +D  + TN
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT-LMLKMSEKDWDDVLNTN 114
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           L  + +  K  +++M+  K  G II                Y  SK GL+G  +S A E 
Sbjct: 115 LKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEF 173
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLAS 231
              GI  N V+P  + T  +     DV     K   L  I LK     + VA    FLAS
Sbjct: 174 AAKGIYCNAVAPGIIKTDMT-----DVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLAS 228
Query: 232 DESAYVSGHDLVVDGGF 248
           D+S Y++G  + +DGG 
Sbjct: 229 DDSNYITGQVINIDGGL 245

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 4/249 (1%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCD 63
           RL GKVAII G   GIG A A  F E GA V+I     ++G +   S+G P++  +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             DE    +      + +G +  + +NAG+A    ++ +   A++ + +A NL G     
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE--LGKHGIR 181
           +   + M    +  SII               AY  SK  +  + +SAA +  L  + +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V P  + TP         E    +     G + +   +A   ++LAS+ES + +G +
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE 241
Query: 242 LVVDGGFTA 250
            VVDGG+TA
Sbjct: 242 FVVDGGYTA 250

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
            +GK+A++ GA+ GIG A A+  A  GA VI      E G Q +S            +V 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKGLMLNVT 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   +E  +     ++G +DI+ +NAG+      ++ +   +++  I TNL+      K 
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K  G II                +  +K GL+G  +S A E+   GI VN V
Sbjct: 121 VMRAMM-KKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 186 SPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           +P  + T  +    +D   G + +V    G +  A+ +A A  FLASDE+AY++G  L V
Sbjct: 180 APGFIETDMTRALSDDQRAGILAQVP--AGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 245 DGGFTAV 251
           +GG   V
Sbjct: 238 NGGMYMV 244

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMALNVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NA +      ++ +   ++   + TNL       K 
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAAITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K +G II                Y  +K G++G  +S A E+   G+ VN V
Sbjct: 128 VLRGMM-KKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTV 186
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 187 APGFIETDMTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 246 GGF 248
           GG 
Sbjct: 246 GGM 248

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH- 61
           KP L+ KVA++  +  GIG A A+  A+ GA V+++  + E  ++ V+++  E  S    
Sbjct: 10  KP-LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 68
Query: 62  -CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            C V   +  E  VA A+  +G +DI+ SNA V    G I+D     +D+ +  N+  +V
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATV 128
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  K     M   +  GS++                Y +SK  LLGL ++ A EL    I
Sbjct: 129 LMTKAVVPEM-EKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNI 187
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-KAKHVAEAALFLASDESAYVSG 239
           RVNC++P  + T FS     D         +L+   L   +  A    FL S++++Y++G
Sbjct: 188 RVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITG 247
Query: 240 HDLVVDGG 247
             +VV GG
Sbjct: 248 ETVVVGGG 255

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGMALNVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NA +      ++ +   ++   + TNL       K 
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNADITRD-NLLMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K +G II                Y  +K G++G  +S A E+   G+ VN V
Sbjct: 128 VLRGMM-KKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTV 186
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 187 APGFIETDMTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245
Query: 246 GGF 248
           GG 
Sbjct: 246 GGM 248

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 12/237 (5%)
Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           ++ G   GIG A A+ FA+ G         D++     S   PE      CD+ D +QVE
Sbjct: 25  LVTGGNRGIGLAIARAFADAG---------DKVAITYRSGEPPEGFLAVKCDITDTEQVE 75
Query: 72  ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV 131
           +      E +G ++++ +NAGV      ++ +    F   + TNL G+   VK A R M+
Sbjct: 76  QAYKEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAML 134
Query: 132 ANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA 191
             K +G ++                Y  SK GL+G  RS A ELG   I  N V+P  V 
Sbjct: 135 RAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVD 193
Query: 192 TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF 248
           T  +    ++    +     L G   + + +A    FLASD+++Y++G  + VDGG 
Sbjct: 194 TDMTKVLTDEQRANIVSQVPL-GRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 39/288 (13%)
Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVV--SSIGPEKAS 58
           PR   K  II G+++GIG  TA LFA+ GA V I     E      Q++  S +  ++ +
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61
Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA-----GPVGTILDLDMAQFDRTIA 113
               DV  E   ++ +   ++++G +D++ +NAG A     G  GT   +D+  + +T+ 
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDI--YHKTLK 119
Query: 114 TNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA------YTISKHGLLGL 167
            NL   +   K     +VA+K  G I+             P A      Y I+K  L   
Sbjct: 120 LNLQAVIEMTKKVKPHLVASK--GEIV-----NVSSIVAGPQAQPDFLYYAIAKAALDQY 172
Query: 168 VRSAASELGKHGIRVNCVSPFGVATPFS-AGTIND--VEGFVCKVANLK-----GIVLKA 219
            RS A +L K GIRVN VSP  V T F+ A  + D   + F   +A+ K     G   K 
Sbjct: 173 TRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232
Query: 220 KHVAEAALFLAS-DESAYVSGHDLVVDGGFTAVT-----NVMSMLEGH 261
           +H+A   LFLA  + S Y+ G  +V DGG + V      +VMS++  H
Sbjct: 233 EHIANIILFLADRNLSFYILGQSIVADGGTSLVMGTQAHDVMSIMSSH 280

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           RL GK A+I GA  GIG   A+ FA  GA ++++       +    ++G +  +  H   
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 63  -DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ +     E    A E +G LD++ +NAG++ P   ++D D   FD TIA NL    +
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ-PVVDTDPQLFDATIAVNLRAPAL 135
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
                 + MVA    G+II              +AY  SK GL+   +  A ELG HGIR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGH 240
            N V P  V T        D       +A +  G       V++A ++LASD ++ ++G 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255
Query: 241 DLVVDGGFT 249
           D+ VDGG+T
Sbjct: 256 DIPVDGGYT 264

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA V I     E G Q +S    +       +V 
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGXALNVT 65
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + + +E  +    +++G +DI+ +NAG+      +      ++     TNL  S+  +  
Sbjct: 66  NPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLXRXKEEEWSDIXETNLT-SIFRLSK 123
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A       K +G II                Y  +K G++G  +S A E+   G+ VN V
Sbjct: 124 AVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTV 183
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +   +ND +          G +   + +A A  FLAS E+AY++G  L V+
Sbjct: 184 APGFIETDXTK-ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 242
Query: 246 GG 247
           GG
Sbjct: 243 GG 244

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIGPEKASYRHCD 63
           RL+ K+A+I G A+GIG A A+ FA  GA + IAD +        + ++G    + + CD
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVK-CD 62
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V     VE      I  +G  DI+ +NAG+  P+    +L   Q+ +T   N+    +  
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMA 121
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K     M  N   G II                Y  +K   +G  R+ AS+LGK GI VN
Sbjct: 122 KAFVPGMKRNGW-GRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 180
Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAK---HVAEAALFLASDESAYVSGH 240
            ++P  V T  +  +   +      + N+   + + +    +  AA FLASD++++++G 
Sbjct: 181 AIAPSLVRTATTEASA--LSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ 238
Query: 241 DLVVDGG 247
            L VDGG
Sbjct: 239 TLAVDGG 245

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---ADIQDELGNQVVSSIGPEKASYRHC 62
           L+GKVA + G++ GIG A A+ +A+ GA V I   +   DE    +  + G    +Y+ C
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK-C 90
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-MAQFDRTIATNLAGSVM 121
           ++ D K VEET++   + +G++D+  +NAGV    G  +D+D    +++ I+ +L G   
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPH---AYTISKHGLLGLVRSAASELGKH 178
                 ++   N  +GS+I             P     Y  +K     L +S A E    
Sbjct: 151 CSHNIGKIFKKNG-KGSLI-ITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF 208
Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLASDESAY 236
             RVN +SP  + T  +     D++    ++  L  +G+    + +    L+LAS+ S +
Sbjct: 209 A-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLT---QELVGGYLYLASNASTF 264
Query: 237 VSGHDLVVDGGFT 249
            +G D+V+DGG+T
Sbjct: 265 TTGSDVVIDGGYT 277

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFV-----IIADIQDELGNQVVSSIGPEKASYRHCDV 64
           VA+I GA SGIG ATA   A  G  V        +++ E+ +++V + G  +A     DV
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVE-EVADEIVGAGG--QAIALEADV 86
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            DE Q    V   + K+G LDI+ +NAG+ G    I DL   ++D TIA NL G+ + + 
Sbjct: 87  SDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLH 146
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXP--HAYTISKHGLLGLVRSAASELGKHGIRV 182
                +   +  G+I+             P   AYT +K   + +V+  A ELGKH IRV
Sbjct: 147 LTVPYL-KQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRV 205
Query: 183 NCVSPFGVATPFSAGT-INDVEGFVCKVANLKGIVL-------KAKHVAEAALFLASDES 234
           N V P  + T  S  T +   E     V   KG V        +++ VAE   FL S+ +
Sbjct: 206 NAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265
Query: 235 AYVSGHDLVVDGG 247
            +V+G  + +DGG
Sbjct: 266 RHVTGSPVWIDGG 278

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRHCDV 64
           L G+  ++ GA  GIG  T +     GA V+ ++  Q +L + V    G E       D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DL 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D +  E     A+   G +D++ +NA VA  +   L++    FDR+   NL   +   +
Sbjct: 62  GDWEATER----ALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR ++A  + G+I+                Y  +K  L  L +  A ELG H IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V+P  V T     T +D       +  +  G   + +HV  A LFL SD S   +G  L 
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP 236
Query: 244 VDGGFTA 250
           V+GGF A
Sbjct: 237 VEGGFWA 243

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRHCDV 64
           L G+  ++ GA  GIG  T +     GA V+ ++  Q +L + V    G E       D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DL 61
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D +  E     A+   G +D++ +NA VA  +   L++    FDR+   NL   +   +
Sbjct: 62  GDWEATER----ALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR ++A  + G+I+                Y  +K  L  L +  A ELG H IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V+P  V T     T +D       +  +  G   + +HV  A LFL SD S   +G  L 
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP 236
Query: 244 VDGGFTA 250
           V+GGF A
Sbjct: 237 VEGGFWA 243

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL  K+A+I GA SGIG A AK F   GA V I   + ++ +  ++ IG         D 
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGI-QADS 84
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSVMA 122
            +  +++        + G +D+++ NAG     P+G + +    Q+D T   N+ G +  
Sbjct: 85  ANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTE---EQYDDTFDRNVKGVLFT 141
Query: 123 VKYAARVMVANKIRGS-IICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
           V+ A  ++     RGS ++                Y  SK  L    R+   +L   GIR
Sbjct: 142 VQKALPLLA----RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197
Query: 182 VNCVSPFGVATP----FSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLASDESA 235
           +N +SP    T      +       +G +  +A     G V +A+ VA AALFLASD+S+
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSS 257
Query: 236 YVSGHDLVVDGG 247
           +V+G +L VDGG
Sbjct: 258 FVTGAELFVDGG 269

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR-HCD 63
           RL+GK A+I G+A GIG A A+ +   GA V IADI  E   Q  + IGP  A+Y    D
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP--AAYAVQXD 62
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V  +  ++  +A  +E  G LDI+ +NA +   +  I+++    +++  A N+AG++  +
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTL 121
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + AAR  +A    G II                Y  +K  ++ L +SA  +L KH I VN
Sbjct: 122 QAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK--------------GIVLKAKHVAEAALFL 229
            ++P  V      G    V+    +  N                G    A+ +   A+FL
Sbjct: 182 AIAPGVVDGEHWDG----VDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFL 237
Query: 230 ASDESAYVSGHDLVVDGG 247
           AS ES Y+      VDGG
Sbjct: 238 ASAESDYIVSQTYNVDGG 255

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 19/243 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
            +GK+A++ GA+ GIG A A+  A  GA VI      E G Q +S            +V 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKGLMLNVT 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   +E  +     ++G +DI+ +NAG+      ++ +   +++  I TNL+      K 
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  K  G II                Y  +K GL+G  +S A E+   GI VN V
Sbjct: 121 VMRAMM-KKRHGRIITIGGQAN---------YAAAKAGLIGFSKSLAREVASRGITVNVV 170
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T     + +   G + +V    G +  A+ +A A  FLASDE+AY++G  L V+
Sbjct: 171 APGFIET-----SDDQRAGILAQVP--AGRLGGAQEIANAVAFLASDEAAYITGETLHVN 223
Query: 246 GGF 248
           GG 
Sbjct: 224 GGM 226

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 20/245 (8%)
Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CDVR 65
           G+  ++ G +SGIG A A  FAE GA V+       LG        P     R    D+ 
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVV------ALGLDADGVHAPRHPRIRREELDIT 64
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D ++++       E    LD++ +NAG++       + D+A F+R +  NL+ +++A + 
Sbjct: 65  DSQRLQRL----FEALPRLDVLVNNAGISR---DREEYDLATFERVLRLNLSAAMLASQL 117
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A R ++A +  GSI+               AY+ SK  ++ L RS A E     IRVN +
Sbjct: 118 A-RPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAI 175
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL--KAKHVAEAALFLASDESAYVSGHDLV 243
           +P  + TP  AG   DVE    ++     +    +A  VA AA FL    +++V+G  L 
Sbjct: 176 APGWIDTPLGAGLKADVEA-TRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA 234
Query: 244 VDGGF 248
           VDGG+
Sbjct: 235 VDGGY 239

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 15/251 (5%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKV I+  AA GIG+A A  FA  GA VI  DI +    ++    G +    R  DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT---RVLDV 59
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             +KQ+++  A  +E+   LD++++ AG     GT+LD +   +D ++  N+    + +K
Sbjct: 60  TKKKQIDQ-FANEVER---LDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGIRVN 183
                M+A K  G+II                 Y+ +K  ++GL +S A++  + GIR N
Sbjct: 115 AFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 184 CVSPFGVATPFSAGTI----NDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVS 238
           CV P  V TP     I    N  E     +   K G    A+ +A   ++LASDESAYV+
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233
Query: 239 GHDLVVDGGFT 249
           G+ +++DGG++
Sbjct: 234 GNPVIIDGGWS 244

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII------ADIQDELGNQVVSSIGPEKASY 59
           L+GK A++ G+ SGIG A A   A+ GA V+I       DI+ E     + S    KA Y
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERE--RSTLESKFGVKAYY 59
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
            + D+ D +   + +A A E  G LDI+ +NAG+      I +  + +++  IA NL+ +
Sbjct: 60  LNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQ-HTAPIEEFPVDKWNAIIALNLS-A 117
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
           V     AA  ++  +  G II               AY  +KHG++GL +  A E    G
Sbjct: 118 VFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKG 177
Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA------------------KH 221
           I  N + P  V TP        VE  +  ++  KGI ++A                  + 
Sbjct: 178 ITCNAICPGWVRTPL-------VEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQ 230
Query: 222 VAEAALFLASDESAYVSGHDLVVDGGFTA 250
           +  AA+FL+S  +  ++G  L +DGG+TA
Sbjct: 231 LGGAAVFLSSAAADQMTGTTLSLDGGWTA 259

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-----DIQDELGNQVVSSIGPEKASYR 60
           LQG+  ++ G   GIG   A +FA  GA V +A     DI   + +  +  +G  K    
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD--LDQLGSGKVIGV 65
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV D  Q +     A+E++G +D++ +NAGV  P   +  +   Q +   A N+ G+ 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTF 124
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
            AV+     ++A+     ++                Y  +K   LG +R+AA EL  H I
Sbjct: 125 YAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVAN--LKGIVLKAKHVAEAALFLASDESAYVS 238
            VN + P  + T    G + + E ++  +A     G +   + +   A FLA+ E+ Y++
Sbjct: 185 TVNAIMPGNIMT---EGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYIT 241
Query: 239 GHDLVVDGG 247
           G  + VDGG
Sbjct: 242 GQAIAVDGG 250

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYRHCD 63
           KVAI+ GA+ GIG A A   A  G  V+I     A   +E+  ++ ++ G  KA     D
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG--KALTAQAD 85
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D   V    A A E +G +D++ +NAG+  P+ TI +   A FDR IA NL G+   +
Sbjct: 86  VSDPAAVRRLFATAEEAFGGVDVLVNNAGIX-PLTTIAETGDAVFDRVIAVNLKGTFNTL 144
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + AA+ +   ++ G II                Y  +K G+       + EL    I VN
Sbjct: 145 REAAQRL---RVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVN 201
Query: 184 CVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            V+P   AT  F  G  ++V     K+A L+ +    + +A A  FLA  + A+V+G  L
Sbjct: 202 AVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTP-QDIAGAVAFLAGPDGAWVNGQVL 260
Query: 243 VVDGG 247
             +GG
Sbjct: 261 RANGG 265

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKA 57
           MSK +  GKV ++ GA   IG ATA   AE G  + + D+  E   +  +S+   G E  
Sbjct: 1   MSK-KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEAR 59
Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
           SY  CDV  E+ V  TV   +  +G +D +++NAG  G    + D     F R +  N+ 
Sbjct: 60  SY-VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVT 118
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
           G+   +K  +R M+     G I+               AY  SK  ++ L  +AA +L  
Sbjct: 119 GAFHVLKAVSRQMITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAP 177
Query: 178 HGIRVNCVSP 187
           + IRVN +SP
Sbjct: 178 YNIRVNAISP 187

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           KVAI+ G +SGIG A       +GA V+   + DE  +  VS        +   DV +E+
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSL-DEKSDVNVSD-------HFKIDVTNEE 66
Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ-FDRTIATNLAGSVMAVKYAA 127
           +V+E V    +KYG +DI+ +NAG+     + L L   + + R I  N+ GS +  KY  
Sbjct: 67  EVKEAVEKTTKKYGRIDILVNNAGIEQ--YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124
Query: 128 RVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
            VM+A    GSII               AY  SKH LLGL RS A +     IR N V P
Sbjct: 125 PVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAVCP 182
Query: 188 FGVATPF--SAGTI------NDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYV 237
             + TP    A  +      N VE  + +       G + + + VAE   FLASD S+++
Sbjct: 183 GTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFI 242
Query: 238 SGHDLVVDGGF 248
           +G  L VDGG 
Sbjct: 243 TGACLTVDGGL 253

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQD--ELGNQVVSSIGPEKASYRH 61
           L G+VA++ GA+ GIG A A+     GA V++   D++    +  ++V++ G  +A    
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHA 84
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CD+     +       +  +G  D++ +NAGV    G +  +  A++D  IA NL    +
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
            ++  A  M+A K RG II               AYT SK GL GL+ SAA EL +H +R
Sbjct: 145 LLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203
Query: 182 VNCVSPFGVATPFSAG 197
           V+ V+P  V T F  G
Sbjct: 204 VSLVAPGSVRTEFGVG 219

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 9/247 (3%)
Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQV--VSSIGPEKASYRHCD 63
           + KVA++ GA  GIG   AK+ A+  + VI I+  Q    + V  + S G E + Y   D
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY-AGD 101
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V  ++++ E +   + ++ ++DI+ +NAG+       L +   +++  + TNL       
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITRD-NLFLRMKNDEWEDVLRTNLNSLFYIT 160
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +  ++ M+ N+  G II                Y+ SK G++G  +S A EL    I VN
Sbjct: 161 QPISKRMINNRY-GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 219
Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDL 242
            ++P  +++  +      ++  +  ++N+  G +   + VA  A FL+SD+S Y++G   
Sbjct: 220 AIAPGFISSDMTDKISEQIKKNI--ISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVF 277
Query: 243 VVDGGFT 249
           V+DGG +
Sbjct: 278 VIDGGLS 284

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR-HCDV 64
           L G+ AI+ G + GIG A A+   + GA V IAD+ D +  Q V + G E   +    DV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADL-DVMAAQAVVA-GLENGGFAVEVDV 67
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
                V+  +  AI+  G  D++ +NAGV+  +   +D+   ++D     N  G  +A +
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A R  +A+  +G I+                Y+ SK  + G  ++ A E+    IRVNC
Sbjct: 127 IACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNC 186
Query: 185 VSPFGVATPFSAGTI---NDVEGFVCKVANLK-------GIVLKAKHVAEAALFLASDES 234
           V P  V T      I    ++ G   +    +       G + + + VA+  +FLASD +
Sbjct: 187 VCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA 246
Query: 235 AYVSGHDLVVDGG 247
            +++G  + V GG
Sbjct: 247 RFMTGQGINVTGG 259

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G+ A++ GA  G+GEA A+     GA V +   ++E   ++ + +G E+      ++ 
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-ERIFVFPANLS 66
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D + V+     A E+ G +DI+ +NAG+    G  + +    +D  +  NL       + 
Sbjct: 67  DREAVKALGQKAEEEMGGVDILVNNAGITRD-GLFVRMSDEDWDAVLTVNLTSVFNLTRE 125
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M+  +  G II                Y  SK GL+G  +S A E+    + VNC+
Sbjct: 126 LTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCI 184
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P  + +  + G +N+ +    K A +  I +K       +A A ++LASDE+AYV+G  
Sbjct: 185 APGFIESAMT-GKLNEKQ----KDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQT 239
Query: 242 LVVDGGFTAV 251
           L V+GG   +
Sbjct: 240 LHVNGGMAMI 249

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G+ A++ GA  G+GEA A+     GA V +   ++E   ++ + +G E+      ++ 
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG-ERIFVFPANLS 63
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D + V+     A E+ G +DI+ +NAG+    G  + +    +D  +  NL       + 
Sbjct: 64  DREAVKALGQKAEEEMGGVDILVNNAGITRD-GLFVRMSDEDWDAVLTVNLTSVFNLTRE 122
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M+  +  G II                Y  SK GL+G  +S A E+    + VNC+
Sbjct: 123 LTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCI 181
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P  + +  + G +N+ +    K A +  I +K       +A A ++LASDE+AYV+G  
Sbjct: 182 APGFIESAMT-GKLNEKQ----KDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQT 236
Query: 242 LVVDGGFTAV 251
           L V+GG   +
Sbjct: 237 LHVNGGMAMI 246

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 20/252 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYRH 61
           L GK ++I GA+SGIG A A+L  + G+ VII+   +E    LGN +      +  +   
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEV 66
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           C++ +    +E  +  I K  +LDI+  NAG+      I   D   FD+ I  NL  + +
Sbjct: 67  CNLAN----KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQ-DFDKVIDINLKANFI 121
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A + M+  K  G II                Y  SK GL+G+ +S + E+   GI 
Sbjct: 122 LNREAIKKMI-QKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180
Query: 182 VNCVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           VN V+P  + +  +   +N+   E  V K+    G     + VA A  FLAS+ ++Y++G
Sbjct: 181 VNAVAPGFIKSDMT-DKLNEKQREAIVQKIP--LGTYGIPEDVAYAVAFLASNNASYITG 237
Query: 240 HDLVVDGGFTAV 251
             L V+GG   V
Sbjct: 238 QTLHVNGGMLMV 249

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRH 61
           + GKVA++ GAA GIG A A+     GA V + D   E G Q  +++     P+K  +  
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL----A 117
           CDV D++Q+ +T    ++ +G LDI+ +NAGV          +   +++T+  NL    +
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVIS 115
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPH-AYTISKHGLLGLVRSA--ASE 174
           G+ + + Y ++    N   G II                 Y  SKHG++G  RSA  A+ 
Sbjct: 116 GTYLGLDYMSK---QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172
Query: 175 LGKHGIRVNCVSPFGVAT 192
           L   G+R+N + P  V T
Sbjct: 173 LMNSGVRLNAICPGFVNT 190

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GK A++ G+ SGIG   A++ A  GA +++    D        +    KA +   D+ 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  Q+E   A A  ++G +DI+ +NAG+   V  +    +  +D+ IA NL+      + 
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRL 120
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   M A    G II               AY  +KHG++GL +    E     +  N +
Sbjct: 121 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAK-----------------HVAEAALF 228
            P  V TP     I+D      + AN  G  L+A+                 H+ E  LF
Sbjct: 180 CPGWVLTPLVQKQIDD------RAAN-GGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLF 232
Query: 229 LASDESAYVSGHDLVVDGGFTA 250
           L S+  + V G    VDGG+ A
Sbjct: 233 LCSEAGSQVRGAAWNVDGGWLA 254

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---C 62
           L GK A++ G+A G+G A A+  A  GA VI+ DI+  L  + V ++   K    H    
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL-TRKGYDAHGVAF 65
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSV 120
           DV DE  +E   +    +   +DI+ +NAG+    P   +++L++  + + I TNL  + 
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP---MVELELENWQKVIDTNLTSAF 122
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  + AA+ M+A    G II                YT +K G+  L  S A+E  +  I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 181 RVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           + N + P  + T  +   I D   + +V K +       + + +   A+FL+S  S Y++
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWV-KSSTPSQRWGRPEELIGTAIFLSSKASDYIN 241
Query: 239 GHDLVVDGGFTAV 251
           G  + VDGG+ AV
Sbjct: 242 GQIIYVDGGWLAV 254

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L G+ A++ GA  GIGEA A+ F   GA V +   +++   ++ + +G +   +   ++
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVF-SANL 82
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D K +++    A  +   +DI+ +NAG+    G  + +    +D  +A NL  +    +
Sbjct: 83  SDRKSIKQLAEVAEREMEGIDILVNNAGITRD-GLFVRMQDQDWDDVLAVNLTAASTLTR 141
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M+  +  G II                Y  +K GL+G  ++ A E+    I VNC
Sbjct: 142 ELIHSMMRRRY-GRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNC 200
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           ++P      F    + D      K A +  I +K     + +A A ++LASDE+AY++G 
Sbjct: 201 IAP-----GFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQ 255
Query: 241 DLVVDGGFTAV 251
            L ++GG   +
Sbjct: 256 TLHINGGMAMI 266

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 7/245 (2%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L   VAI+ GAA+GIG A A  FA+ GA V++ D++ E    V ++I     KA    C+
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V DE+  E  +  A++++G + ++ +NAG  GP     D+ M+ F+     NL  S+  +
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPFDMPMSDFEWAFKLNLF-SLFRL 126
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
              A   +     G+I+               +Y  SK  +  L R+ A ++G  GIRVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186
Query: 184 CVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            ++P  + T   A  +  ++E  + K   L G + +A+ +A AALFL S  +A++SG  L
Sbjct: 187 AIAPGAIKTDALATVLTPEIERAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWISGQVL 245
Query: 243 VVDGG 247
            V GG
Sbjct: 246 TVSGG 250

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G +TAK     GA  ++ D+ +  G      +G     +   +V 
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPANVT 66
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-----MAQFDRTIATNLAGSV 120
            EK+V+  +  A EK+G +D+  + AG+A  + T  +       +  F R I  NL G+ 
Sbjct: 67  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 126
Query: 121 MAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
             ++  A VM  N+      RG II               AY+ SK G++G+    A +L
Sbjct: 127 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 186
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVC 207
              GIRV  ++P   ATP      + V  F+ 
Sbjct: 187 APIGIRVVTIAPGLFATPLLTTLPDKVRNFLA 218

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G +TAK     GA  ++ D+ +  G      +G     +   +V 
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPANVT 65
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-----MAQFDRTIATNLAGSV 120
            EK+V+  +  A EK+G +D+  + AG+A  + T  +       +  F R I  NL G+ 
Sbjct: 66  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 125
Query: 121 MAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
             ++  A VM  N+      RG II               AY+ SK G++G+    A +L
Sbjct: 126 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 185
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVC 207
              GIRV  ++P   ATP      + V  F+ 
Sbjct: 186 APIGIRVVTIAPGLFATPLLTTLPDKVRNFLA 217

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 114/249 (45%), Gaps = 9/249 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA+I GA SG GE  AK FA+ GA V+I D       +V   IG + A     D+ 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-DAALAVAADIS 65
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            E  V+  V  A+ K+G +DI+ +NAG+         ++  +FDR +  N+ G  +    
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSK 125
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHA----YTISKHGLLGLVRSAASELGKHGIR 181
                  N  +G   C            P      Y  +K  ++ + ++ A EL    IR
Sbjct: 126 LIPHFKENGAKGQ-ECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIR 184
Query: 182 VNCVSPFGVATPFSAGTI-NDVEGFVCKVAN--LKGIVLKAKHVAEAALFLASDESAYVS 238
           V  ++P    TP     +  D E    K  +    G +LK   +AEAA FL S +++ ++
Sbjct: 185 VVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMIT 244
Query: 239 GHDLVVDGG 247
           G  L VDGG
Sbjct: 245 GVALDVDGG 253

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G +TAK     GA  ++ D+ +  G      +G     +   +V 
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPANVT 66
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD-----MAQFDRTIATNLAGSV 120
            EK+V+  +  A EK+G +D+  + AG+A  + T  +       +  F R I  NL G+ 
Sbjct: 67  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 126
Query: 121 MAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
             ++  A VM  N+      RG II               AY+ SK G++G+    A +L
Sbjct: 127 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 186
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVC 207
              GIRV  ++P   ATP      + V  F+ 
Sbjct: 187 APIGIRVVTIAPGLFATPLLTTLPDTVRNFLA 218

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +LQGKV+++ G+  GIG A A+  A  G+ VII     E    V   I  +     H  V
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH-GV 62
Query: 65  RDEKQVEETVAYAIEKYGSL----DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
                 EE++  A E+  +L    DI+ +NAG+       L + +  ++  +  NL G+ 
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVLKVNLTGTF 121
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  + + R M+  +  G I+                Y+ +K GL+G  +S A EL    +
Sbjct: 122 LVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNV 180
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
            VN V+P  + T  +A    +++    +   L G     + VA   LFL S+ ++Y++G 
Sbjct: 181 LVNAVAPGFIETDMTAVLSEEIKQKYKEQIPL-GRFGSPEEVANVVLFLCSELASYITGE 239
Query: 241 DLVVDGGF 248
            + V+GG 
Sbjct: 240 VIHVNGGM 247

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYRHCDV 64
           V ++ GA+ GIG+A A    + G  V++     A   +E+  Q+  + G +  ++   DV
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITF-GGDV 60
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E  VE  +  AI+ +G++D++ +NAG+      ++ +  +Q+D  I  NL G  +  +
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT-LLIRMKKSQWDEVIDLNLTGVFLCTQ 119
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A ++M+  K +G II                Y  +K G++G  ++AA E     I VN 
Sbjct: 120 AATKIMM-KKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA-SDESAYVSGHDLV 243
           V P  +A+  +A    D+E  +     L G   + ++VA    FLA S  ++Y++G    
Sbjct: 179 VCPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITGQAFT 237
Query: 244 VDGGF 248
           +DGG 
Sbjct: 238 IDGGI 242

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 30/258 (11%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYR 60
           R + KV I+ G+  GIG+A A+  A  GA V++ADI  E    +  Q+V+  G   A   
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISV 63
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAG 118
             DV D +  +      + ++G +D + +NA + G   +  +L +D   + + ++ NL G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKH 178
           ++   +   + M   +  G+I+              + Y ++K G+ GL +  + ELG  
Sbjct: 124 ALWCTRAVYKKMT-KRGGGAIV---NQSSTAAWLYSNYYGLAKVGINGLTQQLSRELGGR 179
Query: 179 GIRVNCVSPFGVATPFSAGT-----INDVEGFVCKVANLKGIVLKAKHVAE----AALFL 229
            IR+N ++P  + T  +  T     ++D+         +KG+ L      +      LFL
Sbjct: 180 NIRINAIAPGPIDTEANRTTTPKEMVDDI---------VKGLPLSRMGTPDDLVGMCLFL 230
Query: 230 ASDESAYVSGHDLVVDGG 247
            SDE+++++G    VDGG
Sbjct: 231 LSDEASWITGQIFNVDGG 248

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 14/247 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASYR--HCDVR 65
           K A++ GA+ GIG + A   AE G  V +      E    VV  I  +         +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  +V+  +   + ++GSLD++ +NAG+      ++ +   ++D  I TNL G    ++ 
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGVFNCIQK 129
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   M+  +  G+II                Y  +K G++GL +SAA EL   GI VN V
Sbjct: 130 ATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHD 241
           +P      F    + D      K   L  I L    +   +A    FLASD++ Y++G  
Sbjct: 189 AP-----GFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 243
Query: 242 LVVDGGF 248
           + V+GG 
Sbjct: 244 IHVNGGM 250

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPE---KASYR 60
           L+GKVA++ G+ SGIG   A   A  GA +++    D  E+  +V + +  +   K  Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGVKVLYD 60
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+   + V   V  A+ + G +DI+ +NAG+      I D    ++D  +A NL+ +V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS-AV 118
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
                AA   +  +  G II               AY  +KHG++G  +  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 181 RVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLK---AKHVAEAALFL 229
             N + P  V TP     I+        D E    ++ + K   L+    + +   A+FL
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
           ASD +A ++G  + VDGG+TA
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           L G+ A++ G++ G+G A A+  A  GA ++I         Q V    ++G   A     
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-HDAEAVAF 82
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSV 120
           DV  E ++ E  A   E+   +DI+ +NAG+    P   +++L+ A + R I TNL  + 
Sbjct: 83  DVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKP---MIELETADWQRVIDTNLTSAF 139
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           M  + AA+ M+     G I+                YT++K G+  L R+ A+E  ++GI
Sbjct: 140 MIGREAAKRMIPRGY-GKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGI 198
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-KAKHVAEAALFLASDESAYVSG 239
           + N + P  + T  +   I++ E      A        K + +   A+FL++  S YV+G
Sbjct: 199 QANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNG 258
Query: 240 HDLVVDGGFTAV 251
             + VDGG  +V
Sbjct: 259 QIIYVDGGMLSV 270

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASY 59
           +  GK  +I GA+ GIG   AK  A  G  V I     A++ D L N++       KA+ 
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAV 83
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D   E    E +   ++  G L  + +NAGV      I  +    F   I  NL  +
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAI-KMKTEDFHHVIDNNLTSA 142
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
            +  + A +VM  ++  GS++                Y+ SK G++ + +S A E     
Sbjct: 143 FIGCREALKVMSKSRF-GSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRN 201
Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           IR N V+P  + T  +A   ++++    K   L  +   AK VAEA  FL SD S+Y++G
Sbjct: 202 IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLG-SAKEVAEAVAFLLSDHSSYITG 260
Query: 240 HDLVVDGGF 248
             L V+GG 
Sbjct: 261 ETLKVNGGL 269

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII---ADIQDELGNQVVSSIGPEKA 57
           M+   L  ++A++ GA+ GIG A A   A  GA V +   +            +    +A
Sbjct: 21  MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEA 80
Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                DV  E +VE   A  IE++G LD++ +NAG+      +L +    +   +  NL 
Sbjct: 81  FAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT-LLLRMKRDDWQSVLDLNLG 139
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
           G  +  + AA++M+  +  G II                Y+ +K G++GL ++ A EL  
Sbjct: 140 GVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS 198
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE-SAY 236
            GI VN V+P  +AT  ++    +    + +V  L G   +A  VA    FLA+D  +AY
Sbjct: 199 RGITVNAVAPGFIATDMTSELAAE---KLLEVIPL-GRYGEAAEVAGVVRFLAADPAAAY 254
Query: 237 VSGHDLVVDGGF 248
           ++G  + +DGG 
Sbjct: 255 ITGQVINIDGGL 266

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 145
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 146 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 206 CPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 265
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 266 AVTAQALNVCGGL 278

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 20/254 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGPEKASYR---- 60
           L GK A + G + GIG A AK  A  GA V +  +   E    VVS I  E+A  R    
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI--EQAGGRAVAI 86
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV--AGPVGTILDLDMAQFDRTIATNLAG 118
             D RD + +E+ +   +E  G LDI+ ++AG+  + P   + +  +A FD   A N   
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP---LEETTVADFDEVXAVNFRA 143
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXP--HAYTISKHGLLGLVRSAASELG 176
             +A++ A+R +      G  I             P    Y+ SK  L GL +  A +LG
Sbjct: 144 PFVAIRSASRHLG----DGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG 199
Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
             GI VN V P    T  +    +  E    ++A   G   + + +A    +LA  +  +
Sbjct: 200 PRGITVNIVHPGSTDTDXNPADGDHAEAQRERIAT--GSYGEPQDIAGLVAWLAGPQGKF 257
Query: 237 VSGHDLVVDGGFTA 250
           V+G  L +DGG  A
Sbjct: 258 VTGASLTIDGGANA 271

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 6   LQGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASYR 60
           L+GKV ++  AA +GIG  TA+     GA V+I+D  +    E  +Q+ + +G  +    
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL-ADLGLGRVEAV 78
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV   + V+  +   +EK G LD++ +NAG+ G    ++D+   ++DR +   L   +
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNVTLTSVM 137
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
            A + A R        G I+                Y  +K G++ L R +A E  + G+
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVS 238
           R+N VSP      F   T +     + ++A+ +  G   +   VA    FLASD S+Y++
Sbjct: 198 RINAVSPSIARHKFLEKTSS--SELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMT 255
Query: 239 GH 240
           G 
Sbjct: 256 GE 257

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPE---KASYR 60
           L+GKVA++ G+ SGIG   A   A  GA +++    D  E+  +V + +  +   K  Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGVKVLYD 60
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+   + V   V  A+ + G +DI+ +NAG+      I D    ++D  +A NL+ +V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS-AV 118
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
                AA   +  +  G II               AY  +KHG++G  +  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 181 RVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLK---AKHVAEAALFL 229
             N + P  V +P     I+        D E    ++ + K   L+    + +   A+FL
Sbjct: 179 TANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
           ASD +A ++G  + VDGG+TA
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 13/248 (5%)
Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           QGK AI++G   G G AT +   E GA V++    +    ++    GP   + R  D+ D
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALR-SDIAD 65
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++    A A +  G++D+++ NAGV+  +     +  A +DR  A N  G+   V+  
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQ-- 122
Query: 127 ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            R+    +  GSI+                Y+ SK  L+      A+EL   GIRVN VS
Sbjct: 123 -RLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVS 181
Query: 187 PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH------VAEAALFLASDESAYVSGH 240
           P  + TP + G     E    +   L   +   K       VA A LFLA  E+ + +G 
Sbjct: 182 PGFIDTP-TKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGA 239
Query: 241 DLVVDGGF 248
            L VDGG 
Sbjct: 240 KLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 13/248 (5%)
Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           QGK AI++G   G G AT +   E GA V++    +    ++    GP   + R  D+ D
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALR-SDIAD 64
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++    A A +  G++D+++ NAGV+  +     +  A +DR  A N  G+   V+  
Sbjct: 65  LNEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQ-- 121
Query: 127 ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            R+    +  GSI+                Y+ SK  L+      A+EL   GIRVN VS
Sbjct: 122 -RLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVS 180
Query: 187 PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH------VAEAALFLASDESAYVSGH 240
           P  + TP + G     E    +   L   +   K       VA A LFLA  E+ + +G 
Sbjct: 181 PGFIDTP-TKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGA 238
Query: 241 DLVVDGGF 248
            L VDGG 
Sbjct: 239 KLAVDGGL 246

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 141
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 142 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 201
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 202 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 261
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 262 AVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 145
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 146 LKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 206 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 265
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 266 AVTAQALNVCGGL 278

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 145
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 146 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 206 CPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 265
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 266 AVTAQALNVCGGL 278

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 125
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 126 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 185
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 186 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 245
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 246 AVTAQALNVCGGL 258

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 19/261 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPE---KASYR 60
           L+GKVA++ G+ SGIG   A   A  GA +++    D  E+  +V + +  +   K  Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGVKVLYD 60
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+   + V   V  A+ + G +DI+ +NAG+      I D    ++D  +A NL+ +V
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS-AV 118
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
                AA   +  +  G II               AY  +KHG++G  +  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 181 RVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLK---AKHVAEAALFL 229
             N + P  V  P     I+        D E    ++ + K   L+    + +   A+FL
Sbjct: 179 TANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
           ASD +A ++G  + VDGG+TA
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           KVA++ GA  GIG+A A    + G  V IAD  D     V S I      A     DV D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             QV   V  A +  G  D++ +NAGVA P   I  +     D+    N+ G +  ++ A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAA 121
Query: 127 ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
                     G II                Y+ SK  + GL ++AA +L   GI VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 187 PFGVATPFSAGTINDVEGFVCKVANL------KGIVL----KAKHVAEAALFLASDESAY 236
           P  V TP  A     V     K          K I L    + + VA    +LAS +S Y
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241
Query: 237 VSGHDLVVDGGF 248
           ++G  L++DGG 
Sbjct: 242 MTGQSLLIDGGM 253

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQV 145
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 146 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 206 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 265
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 266 AVTAQALNVCGGL 278

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L+ +V I+ GA+SG+G A  +  A+ GA V+  D++   G +  + +G     +R+ DV
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELG-AAVRFRNADV 62
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD----MAQFDRTIATNLAGSV 120
            +E      +A+A +++G +  + + AG A P   IL       +  F RT+A NL G+ 
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTA-PGEKILGRSGPHALDSFARTVAVNLIGTF 121
Query: 121 MAVKYAARVMV-----ANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
             ++ AA V       A+  RG I+               AY  SK G+  L   AA EL
Sbjct: 122 NXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL 181
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVE 203
            + GIRV  ++P    TP  AG   DV+
Sbjct: 182 ARFGIRVVTIAPGIFDTPXXAGXPQDVQ 209

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLD-VVETNLTGVFRVTKQV 145
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 146 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 206 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 265
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 266 AVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             ++E  VA  +E+YG +D++ +NAG  G   T    D    D  + TNL G     K  
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLD-VVETNLTGVFRVTKQV 141
Query: 127 ARV-MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
            +   +  +  G I+                Y+ SKHG++G  ++   EL + GI VN V
Sbjct: 142 LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAV 201
Query: 186 SPFGVATPFSAGT---------INDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESA 235
            P  V TP +A           ++  E F    A +  G  ++   VAE   +L    +A
Sbjct: 202 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 261
Query: 236 YVSGHDLVVDGGF 248
            V+   L V GG 
Sbjct: 262 AVTAQALNVCGGL 274

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 21/253 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC--- 62
           L  +VAI+ GA+ GIG A A   A  GA VI      E G + +       A+++     
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVI-GTATTEAGAEGIG------AAFKQAGLE 78
Query: 63  ------DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                 +V D   V+  V   ++++G+L+++ +NAG+       + +   ++D  I TNL
Sbjct: 79  GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQ-LAMRMKDDEWDAVIDTNL 137
Query: 117 AGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASEL 175
                  +   R M+  K RG  I                 Y  +K G+ G+ R+ A E+
Sbjct: 138 KAVFRLSRAVLRPMM--KARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           G  GI VNCV+P  + T  + G   + +    K     G +   + +A A  FLAS ++ 
Sbjct: 196 GSRGITVNCVAPGFIDTDMTKGLPQEQQ-TALKTQIPLGRLGSPEDIAHAVAFLASPQAG 254
Query: 236 YVSGHDLVVDGGF 248
           Y++G  L V+GG 
Sbjct: 255 YITGTTLHVNGGM 267

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 11/248 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR---HC 62
           L  +  ++ G   GIG   A +FA  GA V +A       + V + +G   A        
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D     +     ++ +G+LD++ +NAG+  P   +  +   Q    +  N+ G+V  
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYT 157
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGIR 181
           V+     + A+  RG +I               + Y  SK   LG +R+AA EL   G+ 
Sbjct: 158 VQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVT 216
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVAN--LKGIVLKAKHVAEAALFLASDESAYVSG 239
           VN + P  +    + G ++  E ++  +A     G++     +   A FLA+DE+ Y++G
Sbjct: 217 VNAILPGNI---LTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITG 273
Query: 240 HDLVVDGG 247
             +VVDGG
Sbjct: 274 QAIVVDGG 281

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +A+Y   +++D+ Q  + VA  I  +G LD + +NAGV   +G  LD     F  ++  N
Sbjct: 56  RATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG--LDAGRDAFVASLERN 113
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           L        Y    + A   RG+I+                Y  SK   L L R  A  L
Sbjct: 114 LIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVAL 171
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH------VAEAALFL 229
            +HG+RVN V P  V TP     I   E    K+A +   V   +       +A+ A+FL
Sbjct: 172 REHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFL 231
Query: 230 ASDESAYVSGHDLVVDGGFT 249
            S  +++ +G  L VDGG+T
Sbjct: 232 LSPRASHTTGEWLFVDGGYT 251

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 23/257 (8%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI--QDELGNQVVSSI--GPEKASYRHCDV 64
           KVA++ G A GIG   ++  A  G  + +AD+  Q+E   + +  I    +KA +   DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D+   +  +  A EK G  D++ +NAG+A  +  +L++      +  + N+      ++
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 125 YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A+R      ++G II               AY+ +K  + GL ++AA EL   G  VN 
Sbjct: 122 AASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNA 181
Query: 185 VSPFGVATPFSAGTINDVEGFVCKV------ANLK----GIVLKAKHVAE--AAL--FLA 230
            +P  V T    G    ++  + K+       N K     I L    V E  A L  FLA
Sbjct: 182 YAPGIVGT----GMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA 237
Query: 231 SDESAYVSGHDLVVDGG 247
           S+ S YV+G  ++VDGG
Sbjct: 238 SENSNYVTGQVMLVDGG 254

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
           +KP    +  ++ G   GIG A A+  A  G  V +             S  P+      
Sbjct: 9   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVE 59
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV D   V+       E  G ++++ SNAG++     ++ +   +F++ I  NL G+  
Sbjct: 60  CDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFR 118
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A+R M  NK  G +I                Y  SK G++G+ RS A EL K  + 
Sbjct: 119 VAQRASRSMQRNKF-GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVT 177
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
            N V+P  + T  +      ++    +    K +   A+ VA    FLAS++++Y+SG  
Sbjct: 178 ANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAE-VAGVVSFLASEDASYISGAV 236
Query: 242 LVVDGGF 248
           + VDGG 
Sbjct: 237 IPVDGGM 243

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 10/250 (4%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL G  A + GA SGIG    + FA  GA +I+ D +    ++    +G   A+    DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D + +    A A      + I+ ++AG+A  +   L+ D A + + +A N+ G   A +
Sbjct: 68  TDAEAMTAAAAEAEAVA-PVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASR 125
Query: 125 YAARVMVANKIRGS-IICXXXXXXXXXXXXPH---AYTISKHGLLGLVRSAASELGKHGI 180
              R MVA   RG+  I             P    +Y  SK  +  L R+ A+E    G+
Sbjct: 126 AFGRAMVA---RGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKV-ANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           RVN ++P  VAT  +       E F   +     G   +   +A AALFLAS  ++YV+G
Sbjct: 183 RVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG 242
Query: 240 HDLVVDGGFT 249
             L VDGG+T
Sbjct: 243 AILAVDGGYT 252

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           +L+GK  +I G  SGIG A +  FA+ GA + IA + DE G+   +    EK   + C  
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL-DEEGDANETKQYVEKEGVK-CVL 101
Query: 63  ---DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ DE+  ++ V   + + GSL+I+ +N     P   +  +   Q ++T   N+   
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
               K A   +    +   II                Y+ +K  ++   RS +  L + G
Sbjct: 162 FHVTKAALSHLKQGDV---IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218
Query: 180 IRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVN V+P  + TP    + ++  V  F   V   +    +   +A A ++LAS +S+YV
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQR--PGQPYELAPAYVYLASSDSSYV 276
Query: 238 SGHDLVVDGG 247
           +G  + V+GG
Sbjct: 277 TGQXIHVNGG 286

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGP-EKASY 59
           R  GK  II G+++GIG + A +FA+ GA V I     D  +E   Q++ +  P EK + 
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI-LDLDMAQFDRTIATNLAG 118
              DV +    ++ +   + K+G +DI+ +NAG     GT   D  +  + +T   N   
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGK 177
            +   +     ++  K +G I+              +  Y  +K  L    R  A +L +
Sbjct: 143 VIEMTQKTKEHLI--KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL---------KAKHVAEAALF 228
           HG+RVN VSP  VAT F  G +   E    K+ +  G            K + +A   +F
Sbjct: 201 HGVRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF 259
Query: 229 LAS-DESAYVSGHDLVVDGGFTAVT-----NVMSML 258
           LA  + S+Y+ G  +V DGG T V      ++MS+L
Sbjct: 260 LADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL 295

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G ATA+     GA  ++ D+ +  G      +G     +   DV 
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVT 66
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ------FDRTIATNLAGS 119
            EK V+  +A A  K+G +D+  + AG+A    T  +L   Q      F R +  NL G+
Sbjct: 67  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKT-YNLKKGQTHTLEDFQRVLDVNLMGT 125
Query: 120 VMAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              ++  A  M  N+      RG II               AY+ SK G++G+    A +
Sbjct: 126 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK---GIVLKAKHVAEAALFLAS 231
           L   GIRV  ++P    TP        V  F+          G   +  H+ +A +    
Sbjct: 186 LAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQAII---- 241
Query: 232 DESAYVSGHDLVVDG 246
            E+ +++G  + +DG
Sbjct: 242 -ENPFLNGEVIRLDG 255

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 26  KLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD 85
           + F   GA V+I D +DE G + +    P  A +  CDV  E  V+  V+  I ++G LD
Sbjct: 27  RAFVNSGARVVICD-KDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 86  IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXX 145
            + +NAG   P     +     F + +  NL G+    K A   +   K +G++I     
Sbjct: 85  CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL--RKSQGNVINISSL 142
Query: 146 XXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS---AGTINDV 202
                      Y  +K  +  + ++ A +   +G+RVNC+SP  + TP     A  + D 
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 202
Query: 203 EGFVCK--VANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
              + +  +A   G + +   V  AA+FLAS E+ + +G +L+V GG
Sbjct: 203 RASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 12/256 (4%)
Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEK 56
           M+ P  L G+ A++ GA SGIG A A  +A  GA V+     D   E+ +++    G  +
Sbjct: 23  MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAE 82
Query: 57  ASYRH-CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           A      D+     V E +A A  +   +D++ +NAG+        ++ + ++   +  N
Sbjct: 83  AVVADLADLEGAANVAEELA-ATRR---VDVLVNNAGIIARA-PAEEVSLGRWREVLTVN 137
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           L  + +  +     M+A+   G I+               AY  SKH ++GL R+ ASE 
Sbjct: 138 LDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEW 196
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDES 234
              G+ VN ++P  V T  +A    D E      A +  G     + +   A+FLASD +
Sbjct: 197 AGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA 256
Query: 235 AYVSGHDLVVDGGFTA 250
           +YV G  L VDGG+ A
Sbjct: 257 SYVHGQVLAVDGGWLA 272

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ------------- 47
           MS    + KV II GA  G+G+  +  FA+ GA V++ D+   L  Q             
Sbjct: 1   MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDE 60
Query: 48  VVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ 107
           +V + G   A Y +  V D  ++ ET   A++ +G++ ++ +NAG+     ++  +    
Sbjct: 61  IVKNGGVAVADYNN--VLDGDKIVET---AVKNFGTVHVIINNAGILRD-ASMKKMTEKD 114
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           +   I  +L G+  AV  AA      +  G I+                Y  +K  LLG 
Sbjct: 115 YKLVIDVHLNGA-FAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGF 173
Query: 168 VRSAASELGKHGIRVNCVSPF 188
             + A E  K+ I+ N ++P 
Sbjct: 174 AETLAKEGAKYNIKANAIAPL 194

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC-- 62
           +L+GK  +I G  SGIG A +  FA+ GA + IA + DE G+   +    EK   + C  
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL-DEEGDANETKQYVEKEGVK-CVL 101
Query: 63  ---DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ DE+  ++ V   + + GSL+I+ +N     P   +  +   Q ++T   N+   
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
               K A   +    +   II                Y+ +K  ++   RS +  L + G
Sbjct: 162 FHVTKAALSHLKQGDV---IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218
Query: 180 IRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           IRVN V+P  + TP    + ++  V  F   V   +    +   +A A ++LAS +S+YV
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRP--GQPYELAPAYVYLASSDSSYV 276
Query: 238 SGHDLVVDGG 247
           +G  + V+GG
Sbjct: 277 TGQMIHVNGG 286

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASYR--HCDVR 65
           K A++ GA+ GIG + A   AE G  V +      E    VV  I  +         +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  +V+  +   + ++GSLD++ +NAG+      +      ++D  I TNL G    ++ 
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRD-NLLXRXKEQEWDDVIDTNLKGVFNCIQK 123
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A    +  +  G+II                Y  +K G++GL +SAA EL   GI VN V
Sbjct: 124 ATPQXLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 182
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHD 241
           +P      F      D      K   L  I L    +   +A    FLASD++ Y++G  
Sbjct: 183 AP-----GFIVSDXTDALSDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 237
Query: 242 LVVDGG 247
           + V+GG
Sbjct: 238 IHVNGG 243

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G ATA+     GA  ++ D+ +  G      +G     +   DV 
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVT 68
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ------FDRTIATNLAGS 119
            EK V+  +A A  K+G +D+  + AG+A    T  +L   Q      F R +  NL G+
Sbjct: 69  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKT-YNLKKGQTHTLEDFQRVLDVNLMGT 127
Query: 120 VMAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              ++  A  M  N+      RG II               AY+ SK G++G+    A +
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 187
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK---GIVLKAKHVAEAALFLAS 231
           L   GIRV  ++P    TP        V  F+          G   +  H+ +A +    
Sbjct: 188 LAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII---- 243
Query: 232 DESAYVSGHDLVVDG 246
            E+ +++G  + +DG
Sbjct: 244 -ENPFLNGEVIRLDG 257

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++G VA+I G ASG+G ATA+     GA  ++ D+ +  G      +G     +   DV 
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVT 66
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ------FDRTIATNLAGS 119
            EK V+  +A A  K+G +D+  + AG+A    T  +L   Q      F R +  NL G+
Sbjct: 67  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKT-YNLKKGQTHTLEDFQRVLDVNLMGT 125
Query: 120 VMAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              ++  A  M  N+      RG II               AY+ SK G++G+    A +
Sbjct: 126 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK---GIVLKAKHVAEAALFLAS 231
           L   GIRV  ++P    TP        V  F+          G   +  H+ +A +    
Sbjct: 186 LAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII---- 241
Query: 232 DESAYVSGHDLVVDG 246
            E+ +++G  + +DG
Sbjct: 242 -ENPFLNGEVIRLDG 255

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++  VA++ G ASG+G AT K   + GA V++ DI+   G  VV+ +G ++A +   DV 
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLG-DRARFAAADVT 62
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD----MAQFDRTIATNLAGSVM 121
           DE  V   +  A E  G+L I+ + AG    +  +L  D    +A F + +  NL GS  
Sbjct: 63  DEAAVASALDLA-ETMGTLRIVVNCAGTGNAI-RVLSRDGVFSLAAFRKIVDINLVGSFN 120
Query: 122 AVKYAA-RVMVANKI------RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
            ++ AA R+     +      RG II               AY+ SK G++G+    A +
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180
Query: 175 LGKHGIRVNCVSPFGVATPFSA 196
           L  H IRV  ++P    TP  A
Sbjct: 181 LASHRIRVMTIAPGLFDTPLLA 202

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 25/254 (9%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL------------GNQVVSSIGPEK 56
           + A+I GA+ GIG A A   AE G  + I   Q+              G+ +V+ +G   
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLG--- 58
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                 ++ + +     V  A E  G LD + +NAG+      ++ +    ++  +  NL
Sbjct: 59  -----ANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDT-LLVRMKDEDWEAVLEANL 112
Query: 117 AGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELG 176
           +      + A ++M+  +  G I+                Y  SK GL+G  R+ A E  
Sbjct: 113 SAVFRTTREAVKLMMKARF-GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYA 171
Query: 177 KHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           + GI VN V+P  + T  +     +V E ++ ++    G   + + VAEA  FL S+++ 
Sbjct: 172 QRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIP--AGRFGRPEEVAEAVAFLVSEKAG 229
Query: 236 YVSGHDLVVDGGFT 249
           Y++G  L VDGG T
Sbjct: 230 YITGQTLCVDGGLT 243

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
           +KP    +  ++ G   GIG A A+  A  G  V +             S  P+      
Sbjct: 29  AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVE 79
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   V+       E  G ++++ SNAG++     ++ +   +F++ I  NL G+  
Sbjct: 80  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFR 138
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A+R M  NK  G +I                Y  SK G++G+ RS A EL K  + 
Sbjct: 139 VAQRASRSMQRNKF-GRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 197
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
            N V+P  + T  +      ++    +    K +   A+ VA    FLAS++++Y+SG  
Sbjct: 198 ANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAE-VAGVVSFLASEDASYISGAV 256
Query: 242 LVVDGGF 248
           + VDGG 
Sbjct: 257 IPVDGGM 263

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL--------GNQVVSSIGPEK 56
           +L G+VA+I G ASG+G A    F   GA V + D   E         G   V  +G   
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVG--- 58
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTI 112
                 DVR  +  +      +  +G +D +  NAG+      + DL      A FD   
Sbjct: 59  ------DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIF 112
Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
             N+ G + AVK     +V++  RGS++                YT +KH ++GLVR  A
Sbjct: 113 HVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA 170
Query: 173 SELGKHGIRVNCVSPFGVAT 192
            EL  H +RVN V+P G+ T
Sbjct: 171 FELAPH-VRVNGVAPGGMNT 189

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
           ++ G + GIG+A  +L  ++    +I  DIQ         S   E   +   D+   KQ 
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQ--------QSFSAENLKFIKADLT--KQQ 57
Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
           + T    I K  S D ++ NAG+    G+I D+D+    + +  N+  S+  +K     +
Sbjct: 58  DITNVLDIIKNVSFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL 116
Query: 131 VANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV 190
              K+  SI+               AYT+SK  +    +S A +L K+ IRVN V P  V
Sbjct: 117 ---KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTV 173
Query: 191 ATPFSAGTINDVEGFVCKVANLKGI-----------------VLKAKHVAEAALFLASDE 233
            T             + K AN  GI                 + + + +AE  +FL SD+
Sbjct: 174 DTDL-------YRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226
Query: 234 SAYVSGHDLVVDGGFTA 250
           S + +G  + +DGG+TA
Sbjct: 227 SKFXTGGLIPIDGGYTA 243

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
           +KP    +  ++ G   GIG A A+  A  G  V +             S  P+      
Sbjct: 9   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVE 59
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   V+       E  G ++++ SNAG++     ++ +   +F++ I  NL G+  
Sbjct: 60  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFR 118
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A+R M  NK  G +I                Y  SK G++G+ RS A EL K  + 
Sbjct: 119 VAQRASRSMQRNKF-GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 177
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
            N V+P  + T  +      ++    +    K +   A+ VA    FLAS++++Y+SG  
Sbjct: 178 ANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAE-VAGVVSFLASEDASYISGAV 236
Query: 242 LVVDGGF 248
           + VDGG 
Sbjct: 237 IPVDGGM 243

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 39/271 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----GNQVVSSIGPEKASYR- 60
           LQG+VAI+ G A+GIG+A  K   E G+ V+IA  + E      +++ +++ P K +   
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 61  --HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD----LDMAQFDRTIAT 114
              C++R+E++V   V   ++ +G ++ + +N G     G  L     +    +   + T
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-----GQFLSPAEHISSKGWHAVLET 130
Query: 115 NLAGSVMAVKYAARVMVANKIR---GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSA 171
           NL G+     Y  + + ++ ++   GSI+              H+   ++ G+  L +S 
Sbjct: 131 NLTGTF----YMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSL 185
Query: 172 ASELGKHGIRVNCVSPFGVATPFSAGTIND--------VEGFVCKV-ANLKGIVLKAKHV 222
           A E    GIR+NCV+P GV   +S   + +         EG   K+ A   G+    + V
Sbjct: 186 ALEWACSGIRINCVAP-GVI--YSQTAVENYGSWGQSFFEGSFQKIPAKRIGV---PEEV 239
Query: 223 AEAALFLASDESAYVSGHDLVVDGGFTAVTN 253
           +    FL S  +++++G  + VDGG +  T+
Sbjct: 240 SSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           K+AI+ GA SG+G A A   A  G  V +A  + +   +  + IG + A     DV D  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDVTDPD 87
Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
            V       +EK+G +D++++NAG   P     DL  AQ+ + + TNL G  +  + A R
Sbjct: 88  SVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEAFR 147
Query: 129 VMVANKIR-GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           V  A + R G II                YT +KH + GL +S + +   H I
Sbjct: 148 VXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRH 61
           K    G  A++ GA  GIG  T K     GA V+ +     +L +      G E      
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC--- 58
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D    E+    A+   G +D++ +NA +   +   L++    FDR+ + NL     
Sbjct: 59  VDLGDWDATEK----ALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQ 113
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +  AR M+   + GSI+                Y+ +K  +  L ++ A ELG H IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI--VLKAKHVAEAALFLASDESAYVSG 239
           VN V+P  V T        D E F  K+     +    + + V  + LFL SD SA  SG
Sbjct: 174 VNSVNPTVVLTDMGKKVSADPE-FARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG 232
Query: 240 HDLVVDGGFTA 250
             ++VD G+ A
Sbjct: 233 GGILVDAGYLA 243

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 7/191 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
             G+ A++ G ASGIG ATA  FA  GA ++++D+      Q V+ +  +   A    CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAG--VAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           VR   ++      A    G +D+++SNAG  VAGP   +  ++   +   I  +L GS+ 
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP---LAQMNHDDWRWVIDIDLWGSIH 145
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
           AV+     ++     G I                 Y ++K+G++GL  + A E+  +GI 
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205
Query: 182 VNCVSPFGVAT 192
           V+ + P  V T
Sbjct: 206 VSVLCPMVVET 216

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYRH 61
           LQGKVA+I GA+SGIGEATA+  A  GA V IA  + E    LG+++ ++    K     
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLE 62
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D + V+  VA  +E  G LDI+ +NAG+   +G + D D   + R I TNL G   
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIX-LLGPVEDADTTDWTRXIDTNLLG--- 118
Query: 122 AVKYAARVMVANKIR--GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
            + Y  R  + + +R  G+++                Y  +K G+     +   E+ + G
Sbjct: 119 -LXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG 177
Query: 180 IRVNCVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVLKAKHVAEAALF 228
           +RV  + P    T       +    E +  +++ ++   L+A+ +AEA  +
Sbjct: 178 VRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRK--LQAQDIAEAVRY 226

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR----H 61
           + GKVA+I G++SGIG A A+ FA+ GA +++   Q +  ++   S+  EK   R     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVA 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDL--DMAQFDRTIATNLAGS 119
            DV   + V+  V      +G  DI+ +NAG  G   TI++   +  QF   +       
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWEL------H 116
Query: 120 VMAVKYAARVMVAN-KIR--GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELG 176
           VMA    AR +V   + R  G+II                Y ++K  L+   ++ A+E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 177 KHGIRVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLK---AKHVAEA 225
           K  IRVNC++P  + TP    T          D +G++  VA+    + +    + +A  
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236
Query: 226 ALFLASDESAYVSGHDLVVDGGF 248
            +FL S+ + Y  G    VDGG 
Sbjct: 237 FVFLCSERATYSVGSAYFVDGGM 259

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR----H 61
           + GKVA+I G++SGIG A A+ FA+ GA +++   Q +  ++   S+  EK   R     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVA 63
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDL--DMAQFDRTIATNLAGS 119
            DV   + V+  V      +G  DI+ +NAG  G   TI++   +  QF   +       
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELL------ 116
Query: 120 VMAVKYAARVMVAN-KIR--GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELG 176
           VMA    AR +V   + R  G+II                Y ++K  L+   ++ A+E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 177 KHGIRVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLK---AKHVAEA 225
           K  IRVNC++P  + TP    T          D +G++  VA+    + +    + +A  
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236
Query: 226 ALFLASDESAYVSGHDLVVDGGF 248
            +FL S+ + Y  G    VDGG 
Sbjct: 237 FVFLCSERATYSVGSAYFVDGGM 259

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--------ADIQDELGNQVVSSIGPEK 56
           +L+G+  +I G ASG+G A    F   GA V +        A+++ + G+ V+  +G   
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVG--- 58
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTI 112
                 DVR  +  ++  +  + ++G +D +  NAG+      ++DL      A FD   
Sbjct: 59  ------DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF 112
Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
             N+ G + AVK     +VA+  RG++I                YT +KH ++GLVR  A
Sbjct: 113 HINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELA 170
Query: 173 SELGKHGIRVNCVSPFGV 190
            EL  + +RVN V   G+
Sbjct: 171 FELAPY-VRVNGVGSGGI 187

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 21/234 (8%)
Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVE 71
           +I GA+ GIGEATA+L    G  V +    ++    + + +  E A     DVR+E    
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--EGALPLPGDVREEGDWA 66
Query: 72  ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV 131
             VA   E +G L  + +NAGV G +  + +L + ++   + TNL G+ + +++A   ++
Sbjct: 67  RAVAAMEEAFGELSALVNNAGV-GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALL 125
Query: 132 ANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA 191
             +  G+I+               AY  SK GLLGL  +A  +L +  +RV  V P  V 
Sbjct: 126 -RRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVD 184
Query: 192 TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           T F+  T     G   K        LK + VA+A LF     +  + GH +V +
Sbjct: 185 TGFAGNT----PGQAWK--------LKPEDVAQAVLF-----ALEMPGHAMVSE 221

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYRH 61
           LQGKVA+I GA+SGIGEATA+  A  GA V IA  + E    LG+++ ++    K     
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLE 62
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D + V+  VA  +E  G LDI+ +NAG+   +G + D D   + R I TNL G   
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLG--- 118
Query: 122 AVKYAARVMVANKIR--GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
            + Y  R  + + +R  G+++                Y  +K G+     +   E+ + G
Sbjct: 119 -LMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG 177
Query: 180 IRVNCVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVLKAKHVAEAALF 228
           +RV  + P    T       +    E +  +++ ++   L+A+ +AEA  +
Sbjct: 178 VRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRK--LQAQDIAEAVRY 226

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 26/261 (9%)
Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ--DELGNQVVSSIGPEKA 57
           M  P  L+G+ A++ GA +G+G+A A   A  GA V+ A  +  DE  + +    G   A
Sbjct: 1   MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGG--NA 58
Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
           S    D  D    +++   A       DI+ +NAG+     ++ +     +D  +  NL 
Sbjct: 59  SALLIDFADPLAAKDSFTDA-----GFDILVNNAGIIRRADSV-EFSELDWDEVMDVNLK 112
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
                 +  A+ ++A    G ++               +YT +KHG+ GL +  A+E   
Sbjct: 113 ALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAA 172
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK--------AKHVAEAALFL 229
            GI VN ++P  + T       N+ E      A  K I+ +        ++ +A AA+FL
Sbjct: 173 KGINVNAIAPGYIET-------NNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFL 225
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
           +S  + YV G  L VDGG+ A
Sbjct: 226 SSAAADYVHGAILNVDGGWLA 246

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 111/254 (43%), Gaps = 20/254 (7%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI--QDELGNQVVSSIGP--EKASYR 60
           RL+ + A++ G  SGIG A A  +A  GA V I  +  ++E   QV + I     KA   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+ DE      V  A E  G LDI+   AG    +  I DL   QF +T A N    V
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVN----V 161
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA--YTISKHGLLGLVRSAASELGKH 178
            A+ +  +  +    +G+ I             PH   Y  +K  +L   R  A ++ + 
Sbjct: 162 FALFWITQEAIPLLPKGASII-TTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220
Query: 179 GIRVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKGIVLKAKHVAEAA---LFLASDE 233
           GIRVN V+P  + T    S G   D      +   +K    +A   AE A   ++LAS E
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK----RAGQPAELAPVYVYLASQE 276
Query: 234 SAYVSGHDLVVDGG 247
           S+YV+     V GG
Sbjct: 277 SSYVTAEVHGVCGG 290

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 10/244 (4%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           + A++ G + GIG A A+     G  V IA    E   Q + ++ P        D +   
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV-PLPTDLEKDDPKG-- 59
Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
                V  A+E  G L ++   A V       L+L   ++ R +  +L  + +  + AA 
Sbjct: 60  ----LVKRALEALGGLHVLVHAAAV-NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114
Query: 129 VMVANKIRGSIICXXXXXXXXXXXXP-HAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
            M        +              P  AYT +K  LLGL R+ A E  + GIRVN + P
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174
Query: 188 FGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLVVDG 246
             V T F+     + E +    A +  G   + + +A  A  L  DE+ Y++G  + VDG
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDG 234
Query: 247 GFTA 250
           GF A
Sbjct: 235 GFLA 238

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 18/260 (6%)
Query: 1   MSKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIG 53
           + +  L+GKV ++ GA+   G+G   A+  AE GA V I     A   +E   ++  + G
Sbjct: 13  LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG 72
Query: 54  PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
            +  +Y+ C V   +  E+ V   +  +G +D   +NAG     G ILD  +  ++  + 
Sbjct: 73  IKAKAYK-CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG-ILDGSVEAWNHVVQ 130
Query: 114 TNLAGSVMAVKYAARVMVANKIRGS----IICXXXXXXXXXXXXPHAYTISKHGLLGLVR 169
            +L G+    K         K RG+    I                +Y ++K G + + R
Sbjct: 131 VDLNGTFHCAKAVGHHF---KERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMAR 187
Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL 229
           S A+E  +   RVN +SP  + T  S     + +     +  +    L AK +  A ++ 
Sbjct: 188 SLANEW-RDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGL-AKELKGAYVYF 245
Query: 230 ASDESAYVSGHDLVVDGGFT 249
           ASD S Y +G DL++DGG+T
Sbjct: 246 ASDASTYTTGADLLIDGGYT 265

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL------GNQVVSSIGPE---- 55
           + G+V I+ GA  GIG A A  FA  GA V++ DI   L      G     S+  E    
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 56  --KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
             +A     +V D  Q    +  A+E +G LD++ +NAG+      I +    +FD  IA
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDR-MIANTSEEEFDAVIA 143
Query: 114 TNLAGSVMAVKYAARVM-----VANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLV 168
            +L G    +++AA            + G II                Y+ +K G+  L 
Sbjct: 144 VHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLT 203
Query: 169 RSAASELGKHGIRVNCVSP 187
              A+E+G++G+ VN ++P
Sbjct: 204 LVGAAEMGRYGVTVNAIAP 222

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY- 59
           MS+P    + A + G +SGIG A A+  A  G  + +     +  N   +  G   A + 
Sbjct: 21  MSRP----QTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVDGLRAAGHD 74
Query: 60  ---RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                CDV    +V   VA A+E++G + I+ ++AG  G  G   DLD A +   + TNL
Sbjct: 75  VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWADVLDTNL 133
Query: 117 AGSVMAVKYAARVMVANKIR----GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
            G     +    V+ A  +R    G I+                YT SKHG++G  +S  
Sbjct: 134 TGVFRVTR---EVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVG 190
Query: 173 SELGKHGIRVNCVSPFGVATPFS 195
            EL K GI VN V P  V TP +
Sbjct: 191 FELAKTGITVNAVCPGYVETPMA 213

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 108/259 (41%), Gaps = 21/259 (8%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI---GPEKASYR 60
           RL GKVA++ G+  GIG A A      GA V++      +   +VVS I   G +  + +
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+R   ++ +    A+  +G LDI  SN+GV    G + D+   +FDR  + N  G  
Sbjct: 75  -ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHG 179
              + A R +      G I+              H+ Y+ SK  +   VR  + + G   
Sbjct: 133 FVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189
Query: 180 IRVNCVSPFGVATPF---------SAGTINDVEGFVCKVANLKGIVLKA--KHVAEAALF 228
           I VN V+P G  T             GT    E      A+   +      + VA    F
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF 249
Query: 229 LASDESAYVSGHDLVVDGG 247
           L S E  +V+G  L +DGG
Sbjct: 250 LVSKEGEWVNGKVLTLDGG 268

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHC 62
           LQGKVA++ GA+ GIG+A A      GA VI          ++  ++   G E A     
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGL-VL 83
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV  ++ V  T+ +  +  G   I+ +NAG+      +   D   FD  + TNL      
Sbjct: 84  DVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFD-VVNTNLNSLYRL 142
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K   R M   +  G II                Y  +K GL G  R+ A E+G   I V
Sbjct: 143 SKAVLRGMTKARW-GRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITV 201
Query: 183 NCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           N V+P  + T  +        E  + ++    G + +A+ +A+   FLASD +AYV+G  
Sbjct: 202 NAVAPGFIDTDMTRELPEAQREALLGQIP--LGRLGQAEEIAKVVGFLASDGAAYVTGAT 259
Query: 242 LVVDGGF 248
           + V+GG 
Sbjct: 260 VPVNGGM 266

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 9/249 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           L+ K  ++ G   GIG A  + FA  GA +      +   N+ +S    +K  ++     
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSV 69
Query: 62  CDVRDEKQVEETVAYAIEKYG-SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           CD     + E+ +      +G  LDI+ +N G      T LD     F   I+TNL  + 
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT-LDYTAEDFSFHISTNLESAY 128
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
              + A  ++ A+   G+II                Y+ +K  L  L R+ A E    GI
Sbjct: 129 HLSQLAHPLLKASGC-GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           R N V+P  +ATP +    +D    V       G   + + V+    FL    ++Y++G 
Sbjct: 188 RANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ 247
Query: 241 DLVVDGGFT 249
            + VDGG T
Sbjct: 248 TICVDGGLT 256

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH-----CD 63
           +VA + G   G+G A ++    H A + +A    E  + V + +  E+ + R       D
Sbjct: 26  RVAFVTGGMGGLGAAISRRL--HDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D +  E      +  +G +D++ +NAG+     T + +    +D  + T+L       
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGITRDA-TFMKMTKGDWDAVMRTDLDAMFNVT 142
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K     MV  +  G I+                Y  +K G+ G  ++ A E  K GI VN
Sbjct: 143 KQFIAGMVERRF-GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 184 CVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            VSP  +AT        DV E  +     + G + +   VA    FL SD++ +V+G DL
Sbjct: 202 TVSPGYLATAMVEAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAFLCSDDAGFVTGADL 260
Query: 243 VVDGGF 248
            ++GG 
Sbjct: 261 AINGGM 266

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
           Y   D+ +E +    V      +G L  +   AG +  +G I  +D   + RT+  N+ G
Sbjct: 67  YEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKH 178
           ++  +K+AAR MV     GS +               AY ++K  +  L++ AA ELG  
Sbjct: 127 TMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGAS 185
Query: 179 GIRVNCVSPFGVATPFSAGTINDVE----GFVCKVANLKGIVLKAKHVAEAALFLASDES 234
            +RVN + P  + T   A      E      +C     +G V   + VA  A+FL SD +
Sbjct: 186 WVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEV---EDVANMAMFLLSDAA 242
Query: 235 AYVSGHDLVVDGG 247
           ++V+G  + VDGG
Sbjct: 243 SFVTGQVINVDGG 255

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDV 64
           L+GKVA++ GA  GIG   A      G  VI+      E   +VV++I  +  S   C  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGSDAACVK 85
Query: 65  RDEKQVEETVAY---AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            +   VE+ V     A++ +G LDI+ SN+GV    G + D+   +FDR    N  G   
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGI 180
             + A + +   +I G +I              HA Y+ SK  +    R  A ++    I
Sbjct: 145 VAREAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAA-------------- 226
            VN V+P G+ T        D+   VC+     G  L  + V E A              
Sbjct: 202 TVNVVAPGGIKT--------DMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 253
Query: 227 ------LFLASDESAYVSGHDLVVDGG 247
                  FLAS++  +V+G  + +DGG
Sbjct: 254 DIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 16/253 (6%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           + +G  AI+ G A G+GEAT +     G  V+IAD+  E G  +   +G  +A +   +V
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-NRAEFVSTNV 85
Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-----LDMAQFDRTIATNLAGS 119
             E  V   +  A  + G L       G  G    I+       DM  F +TI   L G+
Sbjct: 86  TSEDSVLAAI-EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144
Query: 120 -----VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
                ++A   AA     N  RG+++               AY  +K G++GL  +AA +
Sbjct: 145 YNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARD 204
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           L   GIRVN ++P  + TP       + +  F   +   K +       A+AA FL ++ 
Sbjct: 205 LSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTP-DEFADAAAFLLTN- 262
Query: 234 SAYVSGHDLVVDG 246
             Y++G  + +DG
Sbjct: 263 -GYINGEVMRLDG 274

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 108/259 (41%), Gaps = 21/259 (8%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI---GPEKASYR 60
           RL GKVA++ G+  GIG A A      GA V++      +   +VVS I   G +  + +
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+R   ++ +    A+  +G LDI  SN+GV    G + D+   +FDR  + N  G  
Sbjct: 75  -ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHG 179
              + A R +      G I+              H+ ++ SK  +   VR  + + G   
Sbjct: 133 FVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKK 189
Query: 180 IRVNCVSPFGVATPF---------SAGTINDVEGFVCKVANLKGIVLKA--KHVAEAALF 228
           I VN V+P G  T             GT    E      A+   +      + VA    F
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF 249
Query: 229 LASDESAYVSGHDLVVDGG 247
           L S E  +V+G  L +DGG
Sbjct: 250 LVSKEGEWVNGKVLTLDGG 268

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDV 64
           L+GKVA++ GA  GIG   A      G  VI+      E   +VV++I  +  S   C  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGSDAACVK 85
Query: 65  RDEKQVEETVAY---AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            +   VE+ V     A++ +G LDI+ SN+GV    G + D+   +FDR    N  G   
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGI 180
             + A + +   +I G +I              HA Y+ SK  +    R  A ++    I
Sbjct: 145 VAREAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201
Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAA-------------- 226
            VN V+P G+ T        D+   VC+     G  L  + V E A              
Sbjct: 202 TVNVVAPGGIKT--------DMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 253
Query: 227 ------LFLASDESAYVSGHDLVVDGG 247
                  FLAS++  +V+G  + +DGG
Sbjct: 254 DIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 21/247 (8%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           ++ K  +++ A+ GIG A A + ++ GA V I    +EL          +++ +R+  CD
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---------LKRSGHRYVVCD 67
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-LDMAQFDRTIATNLAGSVMA 122
           +R +      +    EK   +DI+  NAG  GP     D L    F   I +     +  
Sbjct: 68  LRKD------LDLLFEKVKEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMIKI 119
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           V+     M   K  G I+              +    ++  L G +++ + E+  +GI V
Sbjct: 120 VRNYLPAM-KEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITV 178
Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           NCV+P    T      +++ +    +       + K + +A    FL S++++Y++G  +
Sbjct: 179 NCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTI 238
Query: 243 VVDGGFT 249
           VVDGG +
Sbjct: 239 VVDGGLS 245

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPEKAS 58
             KP L GKVA++ GAA GIG   A++FA  GA V+  D+    E   +V   +G    +
Sbjct: 207 WDKP-LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG---GT 262
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++  A+  E + G +DI+ +NAG+      + ++D  ++D  IA NL 
Sbjct: 263 ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDK-LLANMDEKRWDAVIAVNL- 320
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A +     +V N      G +I                Y  +K G++GL  + A  
Sbjct: 321 ---LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPV 377
Query: 175 LGKHGIRVNCVSP 187
           L   GI +N V+P
Sbjct: 378 LADKGITINAVAP 390

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 29/274 (10%)
Query: 4   PR---LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSS 51
           PR   ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDR 110
               +A   + +V      EE +      +G  D++ +NA    P   +  D +     +
Sbjct: 76  AVVXQADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 111 TIATNLA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAY 157
           T+ T +A   G+     +   +  A + +G          SI+                Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL 217
            + KH L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L     
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREA 252
Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
            A+ +A+A +FL S  + Y++G  + VDGG + V
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
            S  R Q KV +I GA+ GIG    + + +    V+              SI P      
Sbjct: 21  QSXXRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATS----------RSIKPSADPDI 70
Query: 61  HC---DVRDEKQVEETVAYAIEKYGSLDIMYSNAGV--AGPVGTILDLDMAQFDRTIATN 115
           H    D+   +  +  V   IE++G +D + +NAGV  A P    ++     +D  +  N
Sbjct: 71  HTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP---FVEXTQEDYDHNLGVN 127
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAY-TISKHGLLGLVRSAASE 174
           +AG     + AA   +       +              P A  +++K GL  + RS A E
Sbjct: 128 VAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXE 187
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
             + G+RVN VSP  + TP      +     +  V     I    + V +A L+L  + +
Sbjct: 188 FSRSGVRVNAVSPGVIKTPXHPAETHSTLAGLHPVGRXGEI----RDVVDAVLYL--EHA 241
Query: 235 AYVSGHDLVVDGGFTA 250
            +++G  L VDGG  A
Sbjct: 242 GFITGEILHVDGGQNA 257

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 29/274 (10%)
Query: 4   PR---LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSS 51
           PR   ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDR 110
               +A   + +V      EE +      +G  D++ +NA    P   +  D +     +
Sbjct: 76  AVVXQADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 111 TIATNLA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAY 157
           T+ T +A   G+     +   +  A + +G          SI+                Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL 217
            + KH L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L     
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREA 252
Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
            A+ +A+A +FL S  + Y++G  + VDGG + V
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 104/259 (40%), Gaps = 31/259 (11%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
             GK   + GA  GIG ATA  F E GA V   D           +   E+  +     D
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD----------QAFTQEQYPFATEVMD 54
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D  QV +     + +   LD + + AG+   +G    L    + +T A N+ G+    
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLF 113
Query: 124 KYAARVMVANKIR----GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
           +        N+ R    G+I+               AY  SK  L  L  S   EL   G
Sbjct: 114 Q-----QTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSG 168
Query: 180 IRVNCVSPFGVATPF--SAGTINDVE-------GFVCKVANLKGIVLKAKHVAEAALFLA 230
           +R N VSP    T    +    +D E       G   K+    G + + + +A   LFLA
Sbjct: 169 VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228
Query: 231 SDESAYVSGHDLVVDGGFT 249
           SD +++++  D+VVDGG T
Sbjct: 229 SDLASHITLQDIVVDGGST 247

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           LQ ++ ++ GA+ GIG   A  +A +GA VI+    +E   +V   I  E+         
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 62  ----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C   + +QV + +A     Y  LD +  NAG+ G +G + + D   +   +  N+ 
Sbjct: 72  DLLTCTAEECRQVADRIA---AHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVN 128
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            + M  + A   ++     GS++               AY  SK    G+++  A E   
Sbjct: 129 ATFMLTQ-ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQN 187
Query: 178 HGIRVNCVSPFGVATPFSA 196
             +RVNC++P G  T   A
Sbjct: 188 RSLRVNCINPGGTRTSMRA 206

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKAS--YRHCDVRDEKQ 69
           I+ G   GIG+     F E G  V   DI ++      +    E+ +  Y H DV D   
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS----ADFAKERPNLFYFHGDVADPLT 61
Query: 70  VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV 129
           +++ V YA+EK   +D++ +NA   G  G +  L   +FD  ++  L       +     
Sbjct: 62  LKKFVEYAMEKLQRIDVLVNNA-CRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDE 120
Query: 130 MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG 189
           ++ NK  G II               AY  +K G++ L  + A  LG   + VNC++P  
Sbjct: 121 LIKNK--GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPGW 177
Query: 190 V-ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF 248
           +  T     T  D        A   G V   K ++   LFL   +  +++G  ++VDGG 
Sbjct: 178 INVTEQQEFTQEDC------AAIPAGKVGTPKDISNMVLFLCQQD--FITGETIIVDGGM 229
Query: 249 T 249
           +
Sbjct: 230 S 230

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 26/269 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSSIGPEK 56
           ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++    +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATN 115
           A   + +V      EE +      +G  D++ +NA    P   +  D +     +T+ T 
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 116 LA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAYTISKH 162
           +A   G+     +   +  A + +G          SI+                Y + KH
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 179
Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHV 222
            L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L      A+ +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREASAEQI 237
Query: 223 AEAALFLASDESAYVSGHDLVVDGGFTAV 251
           A+A +FL S  + Y++G  + VDGG + V
Sbjct: 238 ADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSSIGPEK 56
           ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++    +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATN 115
           A   + +V      EE +      +G  D++ +NA    P   +  D +     +T+ T 
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 116 LA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAYTISKH 162
           +A   G+     +   +  A + +G          SI+                Y + KH
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 179
Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHV 222
            L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L      A+ +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREASAEQI 237
Query: 223 AEAALFLASDESAYVSGHDLVVDGGFTAV 251
           A+A +FL S  + Y++G  + VDGG + V
Sbjct: 238 ADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 7/245 (2%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L  KVA++ GA+ GIG   A   A  GA V+          +  +S   +  KA     +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           + D + ++   A    +  ++DI+ +NAG+             ++   I TNL+      
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRD-NLXXRXSEDEWQSVINTNLSSIFRXS 121
Query: 124 KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           K   R     K  G II                Y  +K G++G  +S A E+    I VN
Sbjct: 122 KECVR-GXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180
Query: 184 CVSPFGVATPFSAGTINDVEGFV-CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
            V+P  +AT  +    ++ + F+  K+ +  G + + K +A A  FLAS+E+ Y++G  L
Sbjct: 181 VVAPGFIATDXTDKLTDEQKSFIATKIPS--GQIGEPKDIAAAVAFLASEEAKYITGQTL 238
Query: 243 VVDGG 247
            V+GG
Sbjct: 239 HVNGG 243

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 29/274 (10%)
Query: 4   PR---LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSS 51
           PR   ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDR 110
               +A   + +V      EE +      +G  D++ +NA    P   +  D +     +
Sbjct: 76  AVVCQADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 111 TIATNLA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAY 157
           T+ T +A   G+     +   +  A + +G          SI+                Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL 217
            + KH L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L     
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREA 252
Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
            A+ +A+A +FL S  + Y++G  + VDGG + V
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 29/274 (10%)
Query: 4   PR---LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSS 51
           PR   ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 52  IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDR 110
               +A   + +V      EE +      +G  D++ +NA    P   +  D +     +
Sbjct: 76  AVVCQADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 111 TIATNLA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAY 157
           T+ T +A   G+     +   +  A + +G          SI+                Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL 217
            + KH L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L     
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREA 252
Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
            A+ +A+A +FL S  + Y++G  + VDGG + V
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII-------------ADIQDELGNQVVSSI 52
           L+GKVA++ GA+ GIG A AK  A  GA V I              +IQ   G+    SI
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF--SI 62
Query: 53  GPE-------KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM 105
           G         +A Y   D   + +   T           DI+ +NAG+ GP   I +   
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGST---------KFDILINNAGI-GPGAFIEETTE 112
Query: 106 AQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLL 165
             FDR ++ N       ++ A   +  N     II               AY+ +K  + 
Sbjct: 113 QFFDRXVSVNAKAPFFIIQQALSRLRDNS---RIINISSAATRISLPDFIAYSXTKGAIN 169
Query: 166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVA 223
               + A +LG  GI VN + P  V T  +A  ++D   + +   ++    +  + + +A
Sbjct: 170 TXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLG-EVEDIA 228
Query: 224 EAALFLASDESAYVSGHDLVVDGG 247
           + A FLAS +S +V+G  + V GG
Sbjct: 229 DTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII---------ADIQDELGNQVVSSIGPEK 56
           ++   A++ GAA  IG A A    + G  V+I           + DEL  +  ++    +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATN 115
           A   + +V      EE +      +G  D++ +NA    P   +  D +     +T+ T 
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 116 LA---GSVMAVKYAARVMVANKIRG----------SIICXXXXXXXXXXXXPHAYTISKH 162
           +A   G+     +   +  A + +G          SI+                Y + KH
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 179
Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHV 222
            L+GL +SAA EL  +GIRVN V+P     P + G   + + +  KV  L      A+ +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE-EEKDKWRRKVP-LGRREASAEQI 237
Query: 223 AEAALFLASDESAYVSGHDLVVDGGFTAV 251
           A+A +FL S  + Y++G  + VDGG + V
Sbjct: 238 ADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 112/280 (40%), Gaps = 41/280 (14%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL--------GNQVVSSIGPE- 55
           R+Q KV ++ G A G G + A   AE GA +I+ DI  ++         ++ +   G E 
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                KA     DVRD   V   +A A+ ++G LD++ +NAG+  P+G    L +  F  
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC-PLGA--HLPVQAFAD 123
Query: 111 TIATNLAGSVMAVKYA-------ARVMVANKIRGSI-ICXXXXXXXXXXXXPHAYTISKH 162
               +  G +  V  A       A ++    + G I                  Y+ +K 
Sbjct: 124 AFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQ 183
Query: 163 GLLGLVRSAASELGKHGIRVNCVSPFGVAT------PFSAGTINDVE---------GFVC 207
            +       A++L    IR N + P  V T      P       D+E          F  
Sbjct: 184 LVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPA 243
Query: 208 KVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
             A +    ++A  ++ A  FLASDES YV+G    VD G
Sbjct: 244 MQA-MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 20/258 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---C 62
           L+G  A++ G + GIG A  +  A  GA V      ++  ++ +  I  EK        C
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLE-IWREKGLNVEGSVC 77
Query: 63  DV--RDEK-QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
           D+  R E+ ++ +TVA+  +  G L+I+ +NAGV        D     ++  + TN   +
Sbjct: 78  DLLSRTERDKLMQTVAHVFD--GKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAA 134
Query: 120 VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHG 179
               + A  ++ A++  G++I                Y+ SK  +  + +S A E  K  
Sbjct: 135 YHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193
Query: 180 IRVNCVSPFGVATPFSAGTIN-------DVEGFVCKVANLKGIVLKAKHVAEAALFLASD 232
           IRVN V+P  + TP     I        +++ F+ K     G   K + V+    FL   
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP--MGRAGKPQEVSALIAFLCFP 251
Query: 233 ESAYVSGHDLVVDGGFTA 250
            ++Y++G  +  DGGFTA
Sbjct: 252 AASYITGQIIWADGGFTA 269

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 26/261 (9%)
Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--- 60
           P L+GK  +I G++ GIG ATA+LFA  GA V +       G +  ++I    AS R   
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLH------GRKAPANIDETIASMRADG 56
Query: 61  ------HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVG--TILDLDMAQFDRTI 112
                   D+   +  ++ V   + K+G +D++ +NAG  G VG   + ++D   +D  +
Sbjct: 57  GDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAG--GLVGRKPLPEIDDTFYDAVM 114
Query: 113 ATNLAGSVMAVKYA-ARVMVANKIRG---SIICXXXXXXXXXXXXPHAYTISKHGLLGLV 168
             N+   VM  K+A   +  A K  G   ++I                   +    L  V
Sbjct: 115 DANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNV 174
Query: 169 RSAASEL-GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAAL 227
                +   K G+R N VSP  V T F A    DV   +     + G    A+ +A A L
Sbjct: 175 HKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPM-GRFGTAEEMAPAFL 233
Query: 228 FLASD-ESAYVSGHDLVVDGG 247
           F AS   S Y++G  L ++GG
Sbjct: 234 FFASHLASGYITGQVLDINGG 254

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
             KP L GKVAI+ GAA GIG   A++FA  GA V+  D++    N  +  S +G    +
Sbjct: 191 WEKP-LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVG---GT 246
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++   +  + + G  DI+ +NAG+      + ++D A++D  +A NL 
Sbjct: 247 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL- 304
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A       +V N      G +I                Y  +K G++G+ ++ A  
Sbjct: 305 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 361
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH---VAEAALFLAS 231
           L   GI +N V+P  + T  +A     +     +V      +L+      VAEA  + AS
Sbjct: 362 LAAKGITINAVAPGFIETQMTAA----IPLATREVGRRLNSLLQGGQPVDVAEAIAYFAS 417
Query: 232 DESAYVSGH 240
             S  V+G+
Sbjct: 418 PASNAVTGN 426

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
             KP L GKVAI+ GAA GIG   A++FA  GA V+  D++    N  +  S +G    +
Sbjct: 199 WEKP-LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVG---GT 254
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++   +  + + G  DI+ +NAG+      + ++D A++D  +A NL 
Sbjct: 255 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL- 312
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A       +V N      G +I                Y  +K G++G+ ++ A  
Sbjct: 313 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 369
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH---VAEAALFLAS 231
           L   GI +N V+P  + T  +A     +     +V      +L+      VAEA  + AS
Sbjct: 370 LAAKGITINAVAPGFIETQMTAA----IPLATREVGRRLNSLLQGGQPVDVAEAIAYFAS 425
Query: 232 DESAYVSGH 240
             S  V+G+
Sbjct: 426 PASNAVTGN 434

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
             KP L GKVAI+ GAA GIG   A++FA  GA V+  D++    N  +  S +G    +
Sbjct: 207 WEKP-LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVG---GT 262
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++   +  + + G  DI+ +NAG+      + ++D A++D  +A NL 
Sbjct: 263 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL- 320
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A       +V N      G +I                Y  +K G++G+ ++ A  
Sbjct: 321 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 377
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH---VAEAALFLAS 231
           L   GI +N V+P  + T  +A     +     +V      +L+      VAEA  + AS
Sbjct: 378 LAAKGITINAVAPGFIETQMTAA----IPLATREVGRRLNSLLQGGQPVDVAEAIAYFAS 433
Query: 232 DESAYVSGH 240
             S  V+G+
Sbjct: 434 PASNAVTGN 442

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
             KP L GKVAI+ GAA GIG   A++FA  GA V+  D++    N  +  S +G    +
Sbjct: 228 WEKP-LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVG---GT 283
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++   +  + + G  DI+ +NAG+      + ++D A++D  +A NL 
Sbjct: 284 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL- 341
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A       +V N      G +I                Y  +K G++G+ ++ A  
Sbjct: 342 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 398
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH---VAEAALFLAS 231
           L   GI +N V+P  + T  +A     +     +V      +L+      VAEA  + AS
Sbjct: 399 LAAKGITINAVAPGFIETQMTAA----IPLATREVGRRLNSLLQGGQPVDVAEAIAYFAS 454
Query: 232 DESAYVSGHDLVVDG 246
             S  V+G+ + V G
Sbjct: 455 PASNAVTGNVIRVCG 469

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--QVVSSIGPEKAS 58
             KP L GKVAI+ GAA GIG   A++FA  GA V+  D++    N  +  S +G    +
Sbjct: 215 WEKP-LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVG---GT 270
Query: 59  YRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               DV  +  V++   +  + + G  DI+ +NAG+      + ++D A++D  +A NL 
Sbjct: 271 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL- 328
Query: 118 GSVMAVKYAARVMVANKI---RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
              +A       +V N      G +I                Y  +K G++G+ ++ A  
Sbjct: 329 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 385
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH---VAEAALFLAS 231
           L   GI +N V+P  + T  +A     +     +V      +L+      VAEA  + AS
Sbjct: 386 LAAKGITINAVAPGFIETQMTAA----IPLATREVGRRLNSLLQGGQPVDVAEAIAYFAS 441
Query: 232 DESAYVSGH 240
             S  V+G+
Sbjct: 442 PASNAVTGN 450

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---------GNQVVS 50
           M  P R  G+V ++ GA +G+G A A  FAE GA V++ D+  +           ++VV 
Sbjct: 22  MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 81
Query: 51  SI----GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLD 104
            I    G   A+Y   +     + E+ V  A++ +G +D++ +NAG+        I D D
Sbjct: 82  EIRRRGGKAVANYDSVE-----EGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDED 136
Query: 105 MAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGL 164
              +D     +L GS    + A   M   K  G II                Y+ +K GL
Sbjct: 137 ---WDIIHRVHLRGSFQVTRAAWEHMKKQKY-GRIIMTSSASGIYGNFGQANYSAAKLGL 192
Query: 165 LGLVRSAASELGKHGIRVNCVSP 187
           LGL  S A E  K  I  N ++P
Sbjct: 193 LGLANSLAIEGRKSNIHCNTIAP 215

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 14/254 (5%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEK 56
           MS  R   +  ++ GA   IG A A  FA+ GA V++               +  +G   
Sbjct: 1   MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA 60
Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
            + +  D+ +  +VE  ++ A +K+G +  +   AG      TI ++D A + + +  NL
Sbjct: 61  LAIK-ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119
Query: 117 AGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA--YTISKHGLLGLVRSAASE 174
               +  K A   M     +G  I             P A  Y  SK  ++   R  A E
Sbjct: 120 TSLFLTAKTALPKMA----KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKE 175
Query: 175 LGKHGIRVNCVSPFGVATPF-SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           +G   IRVN V P  ++T F    T  +V   V    +LK     ++ VA    FLASD+
Sbjct: 176 VGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLK-REGSSEDVAGLVAFLASDD 233
Query: 234 SAYVSGHDLVVDGG 247
           +AYV+G    ++GG
Sbjct: 234 AAYVTGACYDINGG 247

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           RL G    I GA+ GIG+A A   A+ GA ++IA    +   +++ +I            
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           KA     DVRDE+Q+   V  AI+K+G +DI+ +NA       T LD    + D  +  N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT-LDTPTKRLDLMMNVN 160
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPH-AYTISKHGLLGLVRSAASE 174
             G+ +A K     +  +K+   +               H AYTI+K+G+   V   A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220
Query: 175 LGKHGIRVNCVSP 187
             K  I VN + P
Sbjct: 221 F-KGEIAVNALWP 232

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 20/257 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
           L  KV +I G    +G   A+  AE GA +++A    +  +++  QV  +    +A    
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVG 66
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D+ QV   V   ++ YG +D++ +NA     +    +         I   + G++ 
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
            ++     +  +K  G+++               AY ++K  LL + ++ A+ELG+ GIR
Sbjct: 127 LIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIR 184
Query: 182 VNCVSP---FG--VATPF--SAG----TINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
           VN V P   +G  + + F   AG    ++ D+       ++LK +  +   VA A LF+A
Sbjct: 185 VNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTE-DEVASAILFMA 243
Query: 231 SDESAYVSGHDLVVDGG 247
           SD ++ ++G  L V+ G
Sbjct: 244 SDLASGITGQALDVNCG 260

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ-VVSSIGPEKASYR--HCDVR 65
           +  ++ GA+ GIG A A+  A  G  + +   +D  G Q  +++I     + R    DV 
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVA 86
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           + +Q  E + + I ++G+   + SNAG+A        L    +D  I TNL      ++ 
Sbjct: 87  NREQCREVLEHEIAQHGAWYGVVSNAGIARDA-AFPALSNDDWDAVIHTNLDSFYNVIQP 145
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M+  +  G II                Y+ +K G++G  ++ A EL K  I VNC+
Sbjct: 146 CIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCI 205
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P  + T    G I ++E    K A +  I +K    A+ VA  A +L SD + YV+   
Sbjct: 206 APGLIDT----GMI-EMEESALKEA-MSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQV 259
Query: 242 LVVDGGF 248
           + ++GG 
Sbjct: 260 ISINGGM 266

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 17/222 (7%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC------- 62
           + +I GA  GIG A A  FA         D +  L     ++   EK S   C       
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHH--PDFEPVLVLSSRTAADLEKISL-ECRAEGALT 60
Query: 63  -----DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D+ D   V     + +E+YG +D + +NAGV G  G + DL    FD T+ TNL 
Sbjct: 61  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV-GRFGALSDLTEEDFDYTMNTNLK 119
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
           G+    + A   ++  +  G I                 Y +SK G  GLV +      K
Sbjct: 120 GTFFLTQ-ALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 178
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA 219
             +R+  V P  V TP      ++++  +    ++   V++A
Sbjct: 179 CNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQA 220

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I  E          
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 62  ----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C   D +Q+ + +A     Y  LD +  NAG+ G V  + + D   +   +  N+ 
Sbjct: 72  DLLTCTSEDCQQLAQRIAV---NYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVN 128
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            + M  + A   ++     GS++               AY  SK    G+++  A E  +
Sbjct: 129 ATFMLTQ-ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-Q 186
Query: 178 HGIRVNCVSPFGVATPFSA 196
             +RVNC++P G  T   A
Sbjct: 187 QRLRVNCINPGGTRTAMRA 205

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 22/261 (8%)
Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L+GK A++ G+ +GIG+A A      GA V+I   ++E  N+ +  I   +A Y    +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEI---RAQYPDAIL 63
Query: 65  RD---EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           +    +   E+     IEKY  +DI+ +N G+  PV    D+    + +    N+   V 
Sbjct: 64  QPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPV-EYFDIPDEDWFKLFEVNIXSGVR 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +   +  +  K  G +I                Y+ +K   L L RS A       + 
Sbjct: 123 LTRSYLKKXIERK-EGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVT 181
Query: 182 VNCVSP-----FGVAT------PFSAGTINDVEGFVCKVANLKGIV---LKAKHVAEAAL 227
           VN + P      GV T      P    TI + E    K      I+   ++ + +A    
Sbjct: 182 VNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVT 241
Query: 228 FLASDESAYVSGHDLVVDGGF 248
           FL+S  S+ ++G  L +DGG 
Sbjct: 242 FLSSPLSSAINGSALRIDGGL 262

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 10/246 (4%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRD 66
           KV II G +SG G+  A  FA+ GA V+I     E   +    I   P +      DVR+
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
              +++ +    EK+G +DI+ +NA     +    DL +  ++  I   L G+    +  
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNA-AGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAI 125
Query: 127 ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELG-KHGIRVNCV 185
            +  +   I+G+II                   +K G+L   ++ A E G K+GIRVN +
Sbjct: 126 GKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAI 185
Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHD 241
           +P  +     A  +   E    +   ++ + L      + +A  A +L SDE+AY++G  
Sbjct: 186 APGPIERTGGADKLWISEEXAKRT--IQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTC 243
Query: 242 LVVDGG 247
              DGG
Sbjct: 244 XTXDGG 249

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 102/264 (38%), Gaps = 27/264 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           L   VA++ G +SGIG AT +L  E GA V       E      S++       R     
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV D  QV           G   I+ +NAG  G V T  +      D   +  L     
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAG-QGRVSTFAETT----DEAWSEELQLKFF 120
Query: 122 AVKYAARVMVA---NKIRGSIICXXXXXXXXXXXXPH--AYTISKHGLLGLVRSAASELG 176
           +V +  R  +    ++   +I+C            PH  A + ++ G+  LVRS A E  
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVC--VNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178
Query: 177 KHGIRVNCV-------SPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEA 225
             G+RVN +         +            D   +  ++A  K I L    K    A A
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238
Query: 226 ALFLASDESAYVSGHDLVVDGGFT 249
            LFLAS  SAY +G  + V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 96/243 (39%), Gaps = 17/243 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----------GPE 55
           L GK   I GA+ GIG A A   A  GA V IA        ++  +I          G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
             + + CD+R+E QV   VA  ++ +G +DI+ +NA      GT LD    +FD     N
Sbjct: 64  GLALK-CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGT-LDTPXKRFDLXQQVN 121
Query: 116 LAGS-VMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
             GS V A      ++ A       +                YT++K G   +    A+E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAE 181
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAA----LFLA 230
            G  G+ +N + P  V    +   +  V+   C+   +      A    EAA     FL 
Sbjct: 182 FGPQGVAINALWPRTVIATDAINXLPGVDAAACRRPEIXADAAHAVLTREAAGFHGQFLI 241
Query: 231 SDE 233
            DE
Sbjct: 242 DDE 244

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---CD 63
           +G++A++ G  +G+G   A+  +  G  V+I   + ++ +     IG    +      CD
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD 91
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D  QV    A    ++  LD++ +NAG   P   + ++   Q++  +A NL G+ +  
Sbjct: 92  VGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCT 151
Query: 124 KYAARVMVANKIR-GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           ++A R   A   R G II                YT +KH + GL +S A +   H I  
Sbjct: 152 QHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDIAC 211
Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
             +     AT  +A     V     +VA    I +  +H+AEA ++ AS
Sbjct: 212 GQIDIGNAATDXTARXSTGVLQANGEVAAEPTIPI--EHIAEAVVYXAS 258

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 31/263 (11%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYRH 61
           +QGK+A++   +SG+G A+A   A +GA +++     E      +++ S +   +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+R+   ++     A    G  DI+  + G   P G  ++L +  +D +       +V 
Sbjct: 65  GDIREPGDIDRLFEKA-RDLGGADILVYSTGGPRP-GRFMELGVEDWDESYRLLARSAVW 122
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + AA  MV  K  G ++                  I +  ++G+VR+ A EL  HG+ 
Sbjct: 123 VGRRAAEQMV-EKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----------------KAKHVAE 224
           VN V P  + T       + V     + A   GI +                 K + +A 
Sbjct: 182 VNAVLPSLILT-------DRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELAS 234
Query: 225 AALFLASDESAYVSGHDLVVDGG 247
              FLAS+++++++G  + VDGG
Sbjct: 235 VVAFLASEKASFITGAVIPVDGG 257

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVII------------ADIQDELGNQVVSSIGP 54
           Q K A++ G++ G+G+A A   AE+G  ++I            A+  ++LG +V+     
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV--- 59
Query: 55  EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
                   +V    +++E      E +G LD+  +NA  +G +  +++L+   +D T+  
Sbjct: 60  ------KANVGQPAKIKEMFQQIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTMNI 112
Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           N    +   + AA++M  N   G I+                  +SK  L  L R  A E
Sbjct: 113 NAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVE 171
Query: 175 LGKHGIRVNCVSPFGVAT------PFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF 228
           L    I VN VS   + T      P     + D      +     G +++ K + +   F
Sbjct: 172 LSPKQIIVNAVSGGAIDTDALKHFPNREDLLED-----ARQNTPAGRMVEIKDMVDTVEF 226
Query: 229 LASDESAYVSGHDLVVDGG 247
           L S ++  + G  ++VDGG
Sbjct: 227 LVSSKADMIRGQTIIVDGG 245

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 21/261 (8%)
Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYR 60
           +  L+G  A++ G + GIG    +  A  GA V       +  N  ++    +  K    
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 61  HCDV--RDEKQ-VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
            CD+  R E+Q +  TVA     +G L+I+ +NAG+        D  +  +   ++ N  
Sbjct: 63  VCDLSSRSERQELMNTVANHF--HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFE 119
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            +      A   + A++ RG+++                Y  +K  +  L R  A E  K
Sbjct: 120 AAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 178
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA--------KHVAEAALFL 229
             IRVN V P  +AT     TI D E    +  NL  ++ +         K +A    FL
Sbjct: 179 DNIRVNGVGPGVIATSLVEMTIQDPE----QKENLNKLIDRCALRRMGEPKELAAMVAFL 234
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
               ++YV+G  + VDGG  A
Sbjct: 235 CFPAASYVTGQIIYVDGGLMA 255

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 21/261 (8%)
Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYR 60
           +  L+G  A++ G + GIG    +  A  GA V       +  N  ++    +  K    
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 61  HCDV--RDEKQ-VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
            CD+  R E+Q +  TVA     +G L+I+ +NAG+        D  +  +   ++ N  
Sbjct: 64  VCDLSSRSERQELMNTVANHF--HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFE 120
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            +      A   + A++ RG+++                Y  +K  +  L R  A E  K
Sbjct: 121 AAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA--------KHVAEAALFL 229
             IRVN V P  +AT     TI D E    +  NL  ++ +         K +A    FL
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPE----QKENLNKLIDRCALRRMGEPKELAAMVAFL 235
Query: 230 ASDESAYVSGHDLVVDGGFTA 250
               ++YV+G  + VDGG  A
Sbjct: 236 CFPAASYVTGQIIYVDGGLMA 256

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 102/249 (40%), Gaps = 14/249 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVII-----ADIQDELGNQVVSSIGPEKASYRHCD 63
           KV +I G + GIG A+A L A  G  V +     +   DE+  Q+  + G  +A     D
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGG--QALAVQAD 83
Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V  E++V         + G L  + +NAGV      +  + + +  R    N+ GS +  
Sbjct: 84  VAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCA 143
Query: 124 KYAARVMVAN--KIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGI 180
           + A +          GSI+              +  Y  +K  +       A E+   GI
Sbjct: 144 REAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGI 203
Query: 181 RVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           RVN V P  + T    S G  N       +V   +     A+ VAEA ++L  D+++Y +
Sbjct: 204 RVNAVRPGIIETDIHASGGLPNRARDVAPQVPXQRAGT--AREVAEAIVWLLGDQASYTT 261
Query: 239 GHDLVVDGG 247
           G  L V GG
Sbjct: 262 GALLDVTGG 270

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-------------QDELGNQVV 49
           K R  G+VA++ GA +G+G   A LFAE GA V++ D+              D + +++ 
Sbjct: 14  KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 73
Query: 50  SSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
            + G   A Y    V D  +V ET   AI+ +G +DI+ +NAG+     +++      ++
Sbjct: 74  KAGGEAVADYNS--VIDGAKVIET---AIKAFGRVDILVNNAGILRDR-SLVKTSEQDWN 127
Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVR 169
                +L GS    + AA   +  +  G II                YT +K GL+GL  
Sbjct: 128 LVNDVHLKGSFKCTQ-AAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186
Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDV 202
           + A E  ++ +  N + P   A+  + G + D+
Sbjct: 187 TVAIEGARNNVLCNVIVP-TAASRMTEGILPDI 218

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I  E          
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 62  ----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C   + +Q+ + +A     Y  LD +  NAG+ G V  + + +   +   +  N+ 
Sbjct: 70  DLLTCTSENCQQLAQRIAV---NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVN 126
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            + M  + A   ++     GS++               AY  SK    G+++  A E  +
Sbjct: 127 ATFMLTQ-ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-Q 184
Query: 178 HGIRVNCVSPFGVATPFSA 196
             +RVNC++P G  T   A
Sbjct: 185 QRLRVNCINPGGTRTAMRA 203

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 39/263 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC--- 62
           L+ KVA I G  SGIG   A++F  HG   +IA     L   + ++     A+ R C   
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA--SRSLPRVLTAARKLAGATGRRCLPL 82
Query: 63  --DVRDEKQVEETVAYAIEKYGSLDIMYSNA--GVAGPVGTILDLDMAQFDRTIATNLAG 118
             DVR    V   V  A++++G +DI+ + A      P G    L    F   +  + +G
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGA---LSFNAFKTVMDIDTSG 139
Query: 119 SVMAVKYAARVMVANKIR--GSIICXXXXXXXXXXXXPHAYTIS-KHGLLGLVRSAASEL 175
           +       +RV+     R  G +I                +  S K  +  + R  A E 
Sbjct: 140 TF----NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEW 195
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFV---CKVANLKGIVLKAK--------HVAE 224
           G   IRVN ++P         G I+  EG        A+L   V  +          +A 
Sbjct: 196 GPQNIRVNSLAP---------GPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAH 246
Query: 225 AALFLASDESAYVSGHDLVVDGG 247
           + L+LAS  ++YV+G  LV DGG
Sbjct: 247 SVLYLASPLASYVTGAVLVADGG 269

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 7/196 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I  E        + 
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 66  D-----EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           D      +  ++     +  Y  LD +  NAG+ G V  + + +   +   +  N+  + 
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATF 127
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
           M  + A   ++     GS++               AY  SK    G+++  A E  +  +
Sbjct: 128 MLTQ-ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRL 185
Query: 181 RVNCVSPFGVATPFSA 196
           RVNC++P G  T   A
Sbjct: 186 RVNCINPGGTRTAMRA 201

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 18/245 (7%)
Query: 1   MSKP---RLQGKVAIIMGAASGIGEATAKLFAEHGAFVI-----IADIQDELGNQVVSSI 52
           M++P   R + ++A++ GA+ GIG A A+   + G  V+     + +I+ EL  +  S+ 
Sbjct: 22  MARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-ELAAECKSAG 80
Query: 53  GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
            P       CD+ +E+ +    +    ++  +DI  +NAG+A P  T+L    + +    
Sbjct: 81  YPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMF 139
Query: 113 ATNLAGSVMAVKYAARVMVANKI-RGSIICXXXXX--XXXXXXXPHAYTISKHGLLGLVR 169
             N+    +  + A + M    +  G II                H Y+ +K+ +  L  
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199
Query: 170 SAASEL--GKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAA 226
               EL   +  IR  C+SP  V T F+    + D E        +K   LK + VAEA 
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMK--CLKPEDVAEAV 257
Query: 227 LFLAS 231
           +++ S
Sbjct: 258 IYVLS 262

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 12/195 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           LQ ++ ++ GA+ GIG   A  +A +GA VI+    +E   +V   I  E+         
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 62  ----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C   + +QV + +A     Y  LD +  NAG+ G +G   + D   +      N+ 
Sbjct: 73  DLLTCTAEECRQVADRIA---AHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVN 129
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            +    +    +++ +   GS++               AY  SK    G  +  A E   
Sbjct: 130 ATFXLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQN 188
Query: 178 HGIRVNCVSPFGVAT 192
             +RVNC++P G  T
Sbjct: 189 RSLRVNCINPGGTRT 203

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---------GNQVVSSI 52
           S  R  G+V ++ GA  G+G A A  FAE GA V++ D+  +           ++VV  I
Sbjct: 3   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI 62
Query: 53  ----GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV--AGPVGTILDLDMA 106
               G   A+Y   +       E+ V  A++ +G +D++ +NAG+        I D D  
Sbjct: 63  RRRGGKAVANYDSVEAG-----EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117
Query: 107 QFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLG 166
              R    +L GS   V  AA      +  G II                Y+ +K GLLG
Sbjct: 118 IIQR---VHLRGS-FQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLG 173
Query: 167 LVRSAASELGKHGIRVNCVSP 187
           L  +   E  K+ I  N ++P
Sbjct: 174 LANTLVIEGRKNNIHCNTIAP 194

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASYRH 61
           L+G+ A++ G++ GIG A A+  A  GA VI+  ++      +  ++++S G   A    
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELA 88
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ +     + +  A E    +DI+  NA  A    T+  L        +A NL  +V 
Sbjct: 89  GDLSEAGAGTDLIERA-EAIAPVDILVINAS-AQINATLSALTPNDLAFQLAVNLGSTVD 146
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
            ++ A   MVA K  G ++               AY  +K     L++S A +     + 
Sbjct: 147 MLQSALPKMVARKW-GRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVL 205
Query: 182 VNCVSPFGVATPFSAG-TINDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           +N ++P  V T  +A     D EG+    +  N  G   + + +  AALFLAS+  ++++
Sbjct: 206 LNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMT 265
Query: 239 GHDLVVDGGF 248
           G  + + GG+
Sbjct: 266 GETIFLTGGY 275

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++KH L GL R+AA EL    IRVN V+P G++    A      E +  KV  L    
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAP-GLSLLPPAMPQETQEEYRRKVP-LGQSE 239
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGF 248
             A  +A+A  FL S ++ Y++G  L VDGG 
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT +KH L GL R+AA EL    IRVN V+P G++    A      E +  KV  L    
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAP-GLSLLPPAXPQETQEEYRRKVP-LGQSE 239
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGF 248
             A  +A+A  FL S ++ Y++G  L VDGG 
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 20/256 (7%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELG---NQVVSSIGPEKASYR 60
           L+G+  ++MG A+   I    A+   E GA +I     + L    +++  ++    +   
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLD-----IMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
            CDV ++ ++E   A   E+ G +      I ++N      VG  L+ +   F   +A N
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANK--EELVGEYLNTNRDGF--LLAHN 120
Query: 116 LAG-SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           ++  S+ AV  AAR M+     GSI+              +   ++K  L   V+  A++
Sbjct: 121 ISSYSLTAVVKAARPMMTEG--GSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAAD 178
Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI--VLKAKHVAEAALFLASD 232
           LGK  IRVN +S   + T  SA  I+D    +  +     +      + V + A FL SD
Sbjct: 179 LGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSD 237
Query: 233 ESAYVSGHDLVVDGGF 248
            S  ++G +L VD GF
Sbjct: 238 MSRGITGENLHVDSGF 253

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           KV +I GA+ GIGE  A+     GA +++   +      + + I      A  +  DV D
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
              V      A++ +G +D++ +NAGV  P+  +  + + +++R I  N+ G +  +   
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 127 ARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKH--GIRVNC 184
             +M A +  G II                Y  +K      VR+ +  L +    IRV C
Sbjct: 124 LPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFA----VRAISDGLRQESTNIRVTC 178
Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V+P GV     AGTI   E  +  +   + I L+   +A A
Sbjct: 179 VNP-GVVESELAGTITH-EETMAAMDTYRAIALQPADIARA 217

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
           L+ KVA+I GA+ GIGEA A+  A  G  + +     D  +++ ++++   G E   Y H
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-VFYHH 80
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGV 93
            DV   + VEE     +E++G +D++ +NAG+
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 26/257 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
            QGKVA I G  +G+G+    L +  GA  +IA    D+      Q+ S  G  K     
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQ 82
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDVRD   V+ TV+  I+  G  +I+ +NA  AG        +       ++ N   ++ 
Sbjct: 83  CDVRDPDMVQNTVSELIKVAGHPNIVINNA--AG--------NFISPTERLSPNAWKTIT 132
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTIS---------KHGLLGLVRSAA 172
            +       V  +I   +I              +A T S         K G+  + +S A
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA 192
Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLA 230
           +E GK+G+R N + P  + T  +   ++    F  ++      G +   + +A  A FL 
Sbjct: 193 AEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC 252
Query: 231 SDESAYVSGHDLVVDGG 247
           SD +++++G  +  DGG
Sbjct: 253 SDYASWINGAVIKFDGG 269

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 11/223 (4%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           K+ +I GA+SGIGEA A+ F+E G   +++A   + L      ++          DV D+
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KALNLPNTLCAQVDVTDK 71
Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
              +  +  A + YG  D + +NAG+   +G I   +  ++ R    N+ G +  ++   
Sbjct: 72  YTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL 130
Query: 128 RVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             M A    G+II               AY  +K  +  +  +   E+    +RV  ++P
Sbjct: 131 APMKARNC-GTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAP 189
Query: 188 FGVATPFSAGTINDV--EGFVCKVANLKGIVLKAKHVAEAALF 228
             V T   + T +    +G+     ++ G VL A  VA A LF
Sbjct: 190 SAVKTELLSHTTSQQIKDGYDAWRVDMGG-VLAADDVARAVLF 231

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVAT-----PFSAGTINDVEGFVCKVAN 211
           YT++K  L GL RSAA EL    IRVN VSP G++      PFS       E +  KV  
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSP-GLSVLPDDMPFSVQ-----EDYRRKVP- 247
Query: 212 LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           L      A+ V++  +FL S ++ Y++G  + VDGG++
Sbjct: 248 LYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 32/241 (13%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ 69
           V +++G  SGIG   AK        V +A  Q  L                  D+ DEK 
Sbjct: 8   VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL------------------DISDEK- 48
Query: 70  VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV 129
              +V +  E  G+ D +   AG   P G ++D+++ Q      T   G+V+A K+ AR 
Sbjct: 49  ---SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARY 105
Query: 130 MVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG 189
           +   K  GSI               +        +    +  A EL    IRVN +SP  
Sbjct: 106 L---KQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGL 160
Query: 190 VATPFSAG-TINDVEGFVCKV-ANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLVVDG 246
             T    G   +D +    +  ++L  G V +A  +A A LF  + +++Y++G  + VDG
Sbjct: 161 TKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLF--AIQNSYMTGTVIDVDG 218
Query: 247 G 247
           G
Sbjct: 219 G 219

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY--RH 61
           LQGK  +I+G A+   I    AK   E GA +      D L  +V   +  E  ++   H
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGH 87
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAG 118
           CDV D   ++       +K+G LD +    G +      G  +D   A F  T+  ++  
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVY- 146
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKH 178
           S+ AV   A  ++A+   GSI+              +   ++K  L   V+  A +LG  
Sbjct: 147 SLTAVSRRAEKLMADG--GSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQ 204
Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA---KHVAEAALFLASDESA 235
            IRVN +S   + T  +A  I D   ++ K       + +      V +  L+  SD S 
Sbjct: 205 NIRVNAISAGPIKT-LAASGIGDFR-YILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSR 262
Query: 236 YVSGHDLVVDGGF 248
            V+G     D G+
Sbjct: 263 SVTGEVHHADSGY 275

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 9  KVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRHCDV 64
          KVA+I GA+ GIGEA A+  A  G  + +     D  +++ ++++   G E   Y H DV
Sbjct: 3  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-VFYHHLDV 61
Query: 65 RDEKQVEETVAYAIEKYGSLDIMYSNAGV 93
             + VEE     +E++G +D++ +NAG+
Sbjct: 62 SKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR----HCDVRDE 67
            I GA SG GEA A+ FAE G  +++   ++E   ++ +  G   A  R      DVRD 
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREE---RLQALAGELSAKTRVLPLTLDVRDR 81
Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
                 V    E++ +L  + +NAG+A         D+  +D  + TN+ G + + +   
Sbjct: 82  AAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLL 141
Query: 128 RVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             ++A+    SI+              H Y  +K  +     +   +L   G+RV  + P
Sbjct: 142 PRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEP 201
Query: 188 FGVATPFS 195
               + FS
Sbjct: 202 GLCESEFS 209

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 12/211 (5%)
Query: 47  QVVSSIGPE---KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDL 103
           +V   +G E   K     CDV +   V +T+       G +  + +NAGV+  V    +L
Sbjct: 53  EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATEL 111
Query: 104 DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA------- 156
               F      N+ G     +  A++ +  + +GSI+                       
Sbjct: 112 THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           Y  SK     LV+  A+E    GIRVN +SP  V T  +A     +         L    
Sbjct: 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFA 231
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
              +   +A L L SD + Y++G +  +DGG
Sbjct: 232 QPEEMTGQAILLL-SDHATYMTGGEYFIDGG 261

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 19/255 (7%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC--- 62
           L G++A++ G + GIG+  A+   E GA V I     E      + +    ++Y  C   
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL----SAYGDCQAI 82
Query: 63  --DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-LDMAQFDRTIATNLAGS 119
             D+  E           E    LDI+ +NAG +   G  L+   ++ +++ +  N+   
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGTS--WGAALESYPVSGWEKVMQLNVTSV 140
Query: 120 VMAVK----YAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
              ++       R   A      I               +AY  SK  L  L R  A EL
Sbjct: 141 FSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 176 -GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDE 233
            G+H I VN ++P    +  +    ND +      A++  G   + + +A  A+ LA   
Sbjct: 201 VGEH-INVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTA 259
Query: 234 SAYVSGHDLVVDGGF 248
            AY++G+ + +DGGF
Sbjct: 260 GAYMTGNVIPIDGGF 274

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE--GFVCKVANLK 213
           AY  SK+ L   VR  A+  G+ G+R+N ++P    TP     + D      + K     
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM 213
Query: 214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
           G   +   +A    FL S  ++YV G  +V+DGG  AV
Sbjct: 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 6   LQGKVAIIMGAAS------GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY 59
           L GK  ++ G  S      GI +A  +  AE  AF  + D   +   +  +  G E    
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAEL-AFTYVGDRFKDRITEFAAEFGSELVF- 69
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDMAQFDRTIATNL 116
             CDV D+ Q++   A     + SLD +  + G A      G  LD  + + +  IA ++
Sbjct: 70  -PCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLD-GLTRENFRIAHDI 127
Query: 117 AG-SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           +  S  A+  AA  M+++    S++              +   ++K  L   VR  A  L
Sbjct: 128 SAYSFPALAKAALPMLSDD--ASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSL 185
Query: 176 GKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           G  G+RVN +S   + T  ++G  +   +  FV   + LK  V   + V  A  FL SD 
Sbjct: 186 GAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNV-TIEQVGNAGAFLLSDL 244
Query: 234 SAYVSGHDLVVDGGFTAVTNVMSMLE 259
           ++ V+   + VD GF AV   M+ LE
Sbjct: 245 ASGVTAEVMHVDSGFNAVVGGMAGLE 270

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFV-IIADIQDELGNQVVSSI---GPEKASYRHCDVR 65
           V ++ G + GIG A  +L A  G  V +      E  + VV++I   G E  +    DV 
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI-PGDVG 86
Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM---- 121
           +   +    +    ++G LD + +NAG+      + +  + + +R +  N+ GS++    
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAE 146
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHA-YTISKHGLLGLVRSAASELGKHGI 180
           AV+  +R+       G+I+              +  Y  SK  +       A E+   GI
Sbjct: 147 AVRRXSRLYSGQG--GAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGI 204
Query: 181 RVNCVSPFGVATPF--SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           RVN V P  + T    S G  +        V   +      + VA+A L+L S  ++YV+
Sbjct: 205 RVNAVRPGIIETDLHASGGLPDRAREXAPSVPXQR--AGXPEEVADAILYLLSPSASYVT 262
Query: 239 GHDLVVDGG 247
           G  L V GG
Sbjct: 263 GSILNVSGG 271

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 13/199 (6%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I  E          
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 62  ----CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C   + +Q+ + +A     Y  LD +  NAG+ G V    + +   +      N+ 
Sbjct: 70  DLLTCTSENCQQLAQRIAV---NYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVN 126
Query: 118 GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGK 177
            +    +    +++ +   GS++               AY  SK    G  +  A E  +
Sbjct: 127 ATFXLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-Q 184
Query: 178 HGIRVNCVSPFGVATPFSA 196
             +RVNC++P G  T   A
Sbjct: 185 QRLRVNCINPGGTRTAMRA 203

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 13/175 (7%)
Query: 16  AASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVA 75
           AASG   A   +    G   +IA++   LG +V+         +   D+ D    + TV 
Sbjct: 50  AASGFDIAITGIGDAEGVAPVIAELSG-LGARVI---------FLRADLADLSSHQATVD 99
Query: 76  YAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK 134
             + ++G +D + +NAG+A  V    LDL    FD  +  NL G+V   +   +  +A+ 
Sbjct: 100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASD 159
Query: 135 IRGSIICXXXXXXXXXXXXPHA--YTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
            R S               P    Y  SK GL    +  A  L + GI V  V P
Sbjct: 160 ARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIAVFEVRP 214

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 22/257 (8%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           LQGK  ++MG A+   I    A+     GA +I     + L   V     ++  +++   
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLD-----IMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
            CDV +++++        ++ G++      I ++N       G  +D     F   +A N
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD--DLKGEFVDTSRDGF--LLAQN 119
Query: 116 LAG-SVMAV-KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAAS 173
           ++  S+ AV + A +VM      G+I+              +   ++K  L   V+  A+
Sbjct: 120 ISAFSLTAVAREAKKVMTEG---GNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLAN 176
Query: 174 ELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           +LG+HGIRVN +S  P    +    G  N +   + + A L+    + + V + A+FL S
Sbjct: 177 DLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQ-EEVGDTAVFLFS 235
Query: 232 DESAYVSGHDLVVDGGF 248
           D +  V+G ++ VD G+
Sbjct: 236 DLARGVTGENIHVDSGY 252

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 22/257 (8%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           LQGK  ++MG A+   I    A+     GA +I     + L   V     ++  +++   
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLD-----IMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
            CDV +++++        ++ G++      I ++N       G  +D     F   +A N
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD--DLKGEFVDTSRDGF--LLAQN 119
Query: 116 L-AGSVMAV-KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAAS 173
           + A S+ AV + A +VM      G+I+              +   ++K  L   V+  A+
Sbjct: 120 ISAFSLTAVAREAKKVMTEG---GNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLAN 176
Query: 174 ELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           +LG+HGIRVN +S  P    +    G  N +   + + A L+    + + V + A+FL S
Sbjct: 177 DLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQ-EEVGDTAVFLFS 235
Query: 232 DESAYVSGHDLVVDGGF 248
           D +  V+G ++ VD G+
Sbjct: 236 DLARGVTGENIHVDSGY 252

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 7/192 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I  E        + 
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 66  D-----EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           D      +  ++     +  Y  LD +  NAG+ G V    + +   +      N+  + 
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATF 150
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGI 180
              +    +++ +   GS++               AY  SK    G  +  A E  +  +
Sbjct: 151 XLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRL 208
Query: 181 RVNCVSPFGVAT 192
           RVNC++P G  T
Sbjct: 209 RVNCINPGGTRT 220

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 17/254 (6%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIGPEKASYR 60
           L+GK A+I G A+   I    AK F   GA   F       ++   ++    G +     
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVV-- 76
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
            CDV  ++ ++    +  E +GSLDI+  +   A      G ++D     F   IA +++
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGF--KIAMDIS 134
Query: 118 -GSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELG 176
             S++A+      ++  +  G+I+              +   I+K  L   VR  A ++ 
Sbjct: 135 VYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIA 193
Query: 177 KHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           KHG R+N +S  P      +S    + +     KV N  G  +  + V + A+FL SD +
Sbjct: 194 KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKV-NPFGKPITIEDVGDTAVFLCSDWA 252
Query: 235 AYVSGHDLVVDGGF 248
             ++G  + VD G+
Sbjct: 253 RAITGEVVHVDNGY 266

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 16/256 (6%)
Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASY--RH 61
           L GK  +I+G A+   I    AK  +  GA +     Q E   + V  +  E   +   H
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFT-YQGEAXKKRVEPLAEEVKGFVCGH 70
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAG 118
           CDV D   ++       +K+G LD +    G +      G  +D+  + F  T   ++  
Sbjct: 71  CDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVYS 130
Query: 119 SVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKH 178
                K A ++       GSI+              +   ++K  L   V+  A +LG  
Sbjct: 131 LTALTKRAEKLXSDG---GSILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLGPK 187
Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA---KHVAEAALFLASDESA 235
            IRVN +S   + T  +A  I D   ++ K       + +    + V ++AL+L SD S 
Sbjct: 188 HIRVNAISAGPIKT-LAASGIGDFR-YILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSR 245
Query: 236 YVSGHDLVVDGGFTAV 251
            V+G    VD G+  +
Sbjct: 246 SVTGEVHHVDSGYNII 261

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 96/254 (37%), Gaps = 28/254 (11%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA-------------DIQDELGNQVVSSIGPE 55
           ++A + G   GIG +  +   + G F ++A             + Q  LG    +S G  
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDG-FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG-- 70
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
                  +V D    ++       + G +D++ +NAG+   V     +    +   I TN
Sbjct: 71  -------NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV-VFRKMTREDWQAVIDTN 122
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           L       K     MV  +  G II                Y+ +K G+ G   S A E+
Sbjct: 123 LTSLFNVTKQVIDGMV-ERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 181
Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
              G+ VN VSP  + T        DV E  V  +   +  +     +     +LAS+ES
Sbjct: 182 ATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRR--LGSPDEIGSIVAWLASEES 239
Query: 235 AYVSGHDLVVDGGF 248
            + +G D  ++GG 
Sbjct: 240 GFSTGADFSLNGGL 253

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD----MAQFDRTIAT 114
           Y   DV  E+ V   VA A E+   L  + S AGV G    IL  +    +  F R +  
Sbjct: 43  YVEGDVTREEDVRRAVARAQEE-APLFAVVSAAGV-GLAEKILGKEGPHGLESFRRVLEV 100
Query: 115 NLAGSVMAVKYAARVMVANKI-----RGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVR 169
           NL G+   ++ AA  M  N       RG I+               AY  SK G++ L  
Sbjct: 101 NLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTL 160
Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAG 197
            AA EL   GIRV  V+P    TP   G
Sbjct: 161 PAARELAGWGIRVVTVAPGLFDTPLLQG 188

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 26/257 (10%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYRH 61
            QGKVA I G  +G+G+    L +  GA  +IA    D+      Q+ S  G  K     
Sbjct: 24  FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTG-NKVHAIQ 82
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDVRD   V+ TV+  I+  G  +I+ +NA  AG        +       ++ N   ++ 
Sbjct: 83  CDVRDPDXVQNTVSELIKVAGHPNIVINNA--AG--------NFISPTERLSPNAWKTIT 132
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTIS---------KHGLLGLVRSAA 172
            +       V  +I   +I              +A T S         K G+    +S A
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLA 192
Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK-VANLK-GIVLKAKHVAEAALFLA 230
           +E GK+G R N + P  + T  +   ++    F  + +  +  G +   + +A  A FL 
Sbjct: 193 AEWGKYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLC 252
Query: 231 SDESAYVSGHDLVVDGG 247
           SD +++++G  +  DGG
Sbjct: 253 SDYASWINGAVIKFDGG 269

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++K  L GL RSAA EL    IRVN V P G++           EG   KV  L    
Sbjct: 213 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDDMPPAVWEGHRSKVP-LYQRD 270
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 271 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 303

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++K  L GL RSAA EL    IRVN V P G++           EG   KV  L    
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDDMPPAVWEGHRSKVP-LYQRD 251
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 252 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 284

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++K  L GL RSAA EL    IRVN V P G++           EG   KV  L    
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDDMPPAVWEGHRSKVP-LYQRD 291
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 292 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++K  L GL RSAA EL    IRVN V P G++           EG   KV  L    
Sbjct: 197 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDDMPPAVWEGHRSKVP-LYQRD 254
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 255 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYR 60
           L GK A++MG  +   +G A A    E GA V ++   + L     ++  ++G   A   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLF 63
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV  +++++   A   E +G LD +      A           A   R I T     +
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAP--------REAMEGRYIDTRRQDWL 115
Query: 121 MAVKYAARVMVANKIR--------GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
           +A++ +A  +VA   R        G I+              +   I+K  L   VR  A
Sbjct: 116 LALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA 175
Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGF------VCKVANLKGIVLKAKHVAEAA 226
            ELG  G+RVN +S    A P        + GF      V + A L+  + + + V    
Sbjct: 176 YELGPKGVRVNAIS----AGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQ-EEVGNLG 230
Query: 227 LFLASDESAYVSGHDLVVDGGFTAVTNVMSM-LEG 260
           LFL S  ++ ++G  + VD G+    ++M M LEG
Sbjct: 231 LFLLSPLASGITGEVVYVDAGY----HIMGMELEG 261

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV 216
           YT++K  L GL RSAA EL    IRVN V P G++           E +  KV  L    
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLADDMPPAVREDYRSKVP-LYQRD 251
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             A  V++  +FL S ++ YV+G  + VDGG++
Sbjct: 252 SSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYS 284

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 20/231 (8%)
Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVI--------IADIQDELGNQVVSSIGPEKASYRH 61
           + ++ GA +G GE   + F + G  VI        + +++DELG+ +  +          
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---------Q 52
Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DVR+   +EE +A    ++ ++DI+ +NAG+A  +       +  ++  I TN  G V 
Sbjct: 53  LDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVY 112
Query: 122 AVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +     MV  +  G II              + Y  +K  +     +  ++L    +R
Sbjct: 113 MTRAVLPGMV-ERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171
Query: 182 VNCVSPFGV-ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           V  + P  V  T FS       +G   K      + L  + V+EA  ++++
Sbjct: 172 VTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ-NTVALTPEDVSEAVWWVST 221

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPE 55
           MS     G+ A + G A+G+G    +     G  V IADI+ +  ++ ++++     GPE
Sbjct: 1   MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE 60
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
               +  DV   +  +        ++G + I+ +NAGV      I +     +D  +  N
Sbjct: 61  VMGVQ-LDVASREGFKMAADEVEARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVN 118
Query: 116 LAGSVMAV-----KYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRS 170
           L G V  V     +   RV    +  G ++             P  Y  +K  + GL  S
Sbjct: 119 LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSES 178
Query: 171 AASELGKHGIRVNCVSP 187
               L K+ I V+ + P
Sbjct: 179 LHYSLLKYEIGVSVLCP 195

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 142
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 143 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 89  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 145
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 146 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 197

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 67  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 123
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 124 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 175

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 75  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 131
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 132 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 183

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 82  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 138
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 139 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 190

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 142
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 143 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 73  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 129
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 130 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 181

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N   S + 
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFL-SYVV 129
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           +  AA  M+     GSI+               AY+ SK  L G   S   E
Sbjct: 130 LTVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 180

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 128
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 129 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 180

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 148
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 149 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 200

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 12/244 (4%)
Query: 11  AIIMGAASGIG-EATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRD 66
           A+I     G+G + T KL A+ G  V +    D    + +        E+  +   DV  
Sbjct: 10  ALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68
Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAG-VAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           ++ + + V  A+  +G +D + +NAG        ++D +  +++  I  NL      +K 
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 126 AARVMVANKIRGSIICXXXXXXXXXXXXPH--AYTISKHGLLGLVRSAASELGKHGIRVN 183
              VM      G II              +  A+  +K GL+ L ++ A E  ++GI  N
Sbjct: 129 VVPVMRKQNF-GRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDL 242
            V P  +       TI   E    K  N   G     + +A    FL  D+S  ++G  +
Sbjct: 188 MVCPGDIIGEMKEATIQ--EARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTII 245
Query: 243 VVDG 246
            V G
Sbjct: 246 EVTG 249

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHC 62
           LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS    +G   A Y   
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            + D    E+ VA A +  G LD++  N      +    D D+    +++  N    V  
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV-- 148
Query: 123 VKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASE 174
           V   A + +  +  GSI+               AY+ SK  L G   S   E
Sbjct: 149 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 200

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 28/200 (14%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVII------------------ADIQDELGNQ 47
           L+GK   I G + GIG A AK  A  GA V +                  A   +E G Q
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 48  VVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQ 107
            +  +G         D+RD   V   VA  +E++G +DI  +NA     +G+I ++ + +
Sbjct: 67  ALPIVG---------DIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKR 116
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           FD      + G+    +     M        +              P  Y ++K+G+   
Sbjct: 117 FDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLC 176
Query: 168 VRSAASELGKHGIRVNCVSP 187
               A EL   GI  N + P
Sbjct: 177 ALGIAEELRDAGIASNTLWP 196

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGFVCKV 209
           AY  SK+ +  L R    +    G+R+N V+P  V TP    +  D         FV  +
Sbjct: 152 AYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL 211
Query: 210 ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
               G   + + VAEA  FL   +++++ G  L VDGG  A+
Sbjct: 212 ----GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL 249

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+    +V      A+  +G LD + SN+G+       L++    FD+    N  G  
Sbjct: 77  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE-LEVTQELFDKVFNLNTRGQF 135
Query: 121 MAVKYAARVMVANKIRGSIICXXXXXXXXXXXXP-HA-YTISKHGLLGLVRSAASELGKH 178
               + A+  + +  RG  I             P HA Y  SK  + G  R+ A + G  
Sbjct: 136 ----FVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 191
Query: 179 GIRVNCVSPFGVAT 192
           G+ VNC++P GV T
Sbjct: 192 GVTVNCIAPGGVKT 205

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 78/203 (38%), Gaps = 35/203 (17%)
Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFV-----------IIADIQDELGNQVVSSIGP 54
           + G+V ++ GA+ GIG   A    + GA V           ++A     LG Q V  +  
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV-- 60
Query: 55  EKASYRHCDVRDEKQVEETVAYA-IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIA 113
                  CD   E +V         E+ G LD++ +NA  AG V TIL+     F  T A
Sbjct: 61  -------CDSSQESEVRSLFEQVDREQQGRLDVLVNNA-YAG-VQTILNTRNKAFWETPA 111
Query: 114 T--------NLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLL 165
           +         L G      Y AR+MV       ++             P  Y + K    
Sbjct: 112 SMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP--YGVGKAACD 169
Query: 166 GLVRSAASELGKHGIRVNCVSPF 188
            L    A EL +HG  V+CVS +
Sbjct: 170 KLAADCAHELRRHG--VSCVSLW 190

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 219
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 3/179 (1%)
Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           KV ++ GA+SG G A A+     G  VI    + E  + +V++  P++A     DV D +
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDVTDGE 64
Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
           +++   A  + +YG +D++ +NAG    VG   +    +       ++ G     + A  
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTR-ALL 122
Query: 129 VMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
                +  GS++               AY+ +K  L  L    A E+   GI+V  V P
Sbjct: 123 PQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 219
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 219
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 219
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 218
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 219 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIV 216
           ++K  L   VR  A+ +G  G+RVN +S   + T  +A  I D    +  C+        
Sbjct: 164 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRT 222
Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
           +  + V  +A FL SD SA +SG  + VDGGF+
Sbjct: 223 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 255

>pdb|3GUY|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE FROM VIBRIO Parahaemolyticus Length = 230

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 11/198 (5%)
Query: 12  IIMGAASGIGEATAKLF-AEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
           +I GA+SG+G   AKL+ AE  A  +    + +L    V++       YR  D+   ++V
Sbjct: 5   VITGASSGLGAELAKLYDAEGKATYLTGRSESKLS--TVTNCLSNNVGYRARDLASHQEV 62
Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
           E+      E+  S+     ++  +G  G + + D  Q    I  NL+ ++  ++   +  
Sbjct: 63  EQL----FEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRY 118
Query: 131 VANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV 190
               +  +++                Y   K  + GL+ S   EL    +++  V P G+
Sbjct: 119 KDQPV--NVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM 176
Query: 191 ATPF--SAGTINDVEGFV 206
           AT F  ++G   D   F+
Sbjct: 177 ATEFWETSGKSLDTSSFM 194

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASY 59
           L+ K  +IMG A+   I    AK+  + GA ++    ++    EL  +++  +   +A  
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-EKLLEQLNQPEAHL 62
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG------------PVGTILDLDMAQ 107
              DV+ +++V        +  G++D +Y +   A               G +L  D++ 
Sbjct: 63  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 122
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           +  TI  + A  +M               GSI+              +   ++K  L   
Sbjct: 123 YSLTIVAHEAKKLMPEG------------GSIVATTYLGGEFAVQNYNVMGVAKASLEAN 170
Query: 168 VRSAASELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V+  A +LG   IRVN +S  P    +    G  N +   + + A LK  V + + V + 
Sbjct: 171 VKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVE-VGKT 229
Query: 226 ALFLASDESAYVSGHDLVVDGGFTAV 251
           A +L SD S+ V+G ++ VD GF A+
Sbjct: 230 AAYLLSDLSSGVTGENIHVDSGFHAI 255

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 5   RLQGKVAIIMGAASGIGEATA--KLFAEHGAFVIIADIQ-----DELGNQVVSSIGPEKA 57
           RL  K  +I GA++GIG+ATA   L A +G   +I   +     +EL   +       K 
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89
Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA---GPVGTILDLDMAQ-FDRTIA 113
                D+   ++++  +    +++  +DI+ +NAG A     VG I   D+   FD  + 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149
Query: 114 T--NLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSA 171
              N+  +V+ +  A       K  G I+                Y  SK  +     S 
Sbjct: 150 ALINITQAVLPIFQA-------KNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSL 202
Query: 172 ASELGKHGIRVNCVSPFGVATPFS 195
             EL    IRV  ++P  V T FS
Sbjct: 203 RKELINTKIRVILIAPGLVETEFS 226

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 11/202 (5%)
Query: 1   MSKPR--LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS---IGPE 55
           M K R  + G++ +I GA  GIG  TA  FA+  + +++ DI      +  +    +G +
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81
Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
             ++   D  + + +  +      + G + I+ +NAGV          D  Q ++T   N
Sbjct: 82  VHTFV-VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQD-PQIEKTFEVN 139
Query: 116 LAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAASEL 175
           +       K     M  N   G I+               AY  SK   +G  ++   EL
Sbjct: 140 VLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198
Query: 176 GK---HGIRVNCVSPFGVATPF 194
                 G++  C+ P  V T F
Sbjct: 199 AALQITGVKTTCLCPNFVNTGF 220

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASY 59
           L+ K  +IMG A+   I    AK+  + GA ++    ++    EL  +++  +   +A  
Sbjct: 25  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-EKLLEQLNQPEAHL 83
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG------------PVGTILDLDMAQ 107
              DV+ +++V        +  G++D +Y +   A               G +L  D++ 
Sbjct: 84  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 143
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           +  TI  + A  +M               GSI+              +   ++K  L   
Sbjct: 144 YSLTIVAHEAKKLMPEG------------GSIVATTYLGGEFAVQNYNVMGVAKASLEAN 191
Query: 168 VRSAASELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V+  A +LG   IRVN +S  P    +    G  N +   + + A LK  V + + V + 
Sbjct: 192 VKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVE-VGKT 250
Query: 226 ALFLASDESAYVSGHDLVVDGGFTAV 251
           A +L SD S+ V+G ++ VD GF A+
Sbjct: 251 AAYLLSDLSSGVTGENIHVDSGFHAI 276

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 34/262 (12%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYR 60
           L GK A++ G  +   +G A A    E GA V ++   + L     ++  ++G   A   
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLF 63
Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV  +++++   A   E +G LD +      A           A   R I T     +
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAP--------REAXEGRYIDTRRQDWL 115
Query: 121 MAVKYAARVMVANKIR--------GSIICXXXXXXXXXXXXPHAYTISKHGLLGLVRSAA 172
           +A++ +A  +VA   R        G I+              +   I+K  L   VR  A
Sbjct: 116 LALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLA 175
Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGF------VCKVANLKGIVLKAKHVAEAA 226
            ELG  G+RVN +S    A P        + GF      V + A L+  + + + V    
Sbjct: 176 YELGPKGVRVNAIS----AGPVRTVAARSIPGFTKXYDRVAQTAPLRRNITQ-EEVGNLG 230
Query: 227 LFLASDESAYVSGHDLVVDGGF 248
           LFL S  ++ ++G  + VD G+
Sbjct: 231 LFLLSPLASGITGEVVYVDAGY 252

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASY 59
           L+ K  +IMG A+   I    AK+  + GA ++    ++    EL  +++  +   +A  
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-EKLLEQLNQPEAHL 62
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG------------PVGTILDLDMAQ 107
              DV+ +++V        +  G++D +Y +   A               G +L  D++ 
Sbjct: 63  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 122
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           +  TI  + A  +M               GSI+              +   ++K  L   
Sbjct: 123 YSLTIVAHEAKKLMPEG------------GSIVATTYLGGEFAVQNYNVMGVAKASLEAN 170
Query: 168 VRSAASELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V+  A +LG   IRVN +S  P    +    G  N +   + + A LK  V + + V + 
Sbjct: 171 VKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVE-VGKT 229
Query: 226 ALFLASDESAYVSGHDLVVDGGFTAV 251
           A +L SD S+ V+G ++ VD GF A+
Sbjct: 230 AAYLLSDLSSGVTGENIHVDSGFHAI 255

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASY 59
           L+ K  +IMG A+   I    AK+  + GA ++    ++    EL  +++  +   +A  
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-EKLLEQLNQPEAHL 88
Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG------------PVGTILDLDMAQ 107
              DV+ +++V        +  G++D +Y +   A               G +L  D++ 
Sbjct: 89  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 148
Query: 108 FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICXXXXXXXXXXXXPHAYTISKHGLLGL 167
           +  TI  + A  +M               GSI+              +   ++K  L   
Sbjct: 149 YSLTIVAHEAKKLMPEG------------GSIVATTYLGGEFAVQNYNVMGVAKASLEAN 196
Query: 168 VRSAASELGKHGIRVNCVS--PFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
           V+  A +LG   IRVN +S  P    +    G  N +   + + A LK  V + + V + 
Sbjct: 197 VKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVE-VGKT 255
Query: 226 ALFLASDESAYVSGHDLVVDGGFTAV 251
           A +L SD S+ V+G ++ VD GF A+
Sbjct: 256 AAYLLSDLSSGVTGENIHVDSGFHAI 281

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	262
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-115
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	5e-98
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-90
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-90
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-88
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-86
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-86
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-85
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-85
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-84
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-84
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-82
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-82
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-81
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-81
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-80
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-80
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-79
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-79
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-78
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-78
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	6e-77
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-76
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-76
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-76
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-76
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-75
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-74
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-74
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-73
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-72
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-72
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-71
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-71
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-70
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-70
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-70
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-70
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-69
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-69
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-69
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-69
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-69
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-69
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	7e-69
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-68
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-68
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-68
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-67
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-66
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-66
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-65
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-65
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	9e-65
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-64
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-64
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-64
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-64
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-64
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	5e-64
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-63
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-62
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-62
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-62
3imf_A	257	Short chain dehydrogenase; structural genomics, in	8e-62
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-61
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-61
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-61
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-61
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	9e-60
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-59
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-59
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-59
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-59
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-58
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-58
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-58
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	9e-58
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-57
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-57
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-57
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-57
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-57
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	8e-57
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-56
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-56
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-56
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-56
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-56
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-55
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-55
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-54
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-54
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-54
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-54
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-53
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-53
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-53
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-53
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-53
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	8e-53
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-52
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-52
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-52
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-52
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-52
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-51
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-51
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-51
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	7e-51
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-50
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-50
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-50
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	7e-50
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-49
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-49
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-49
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-48
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-48
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-48
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-48
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-48
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-47
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-47
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-47
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-47
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	7e-47
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	7e-47
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	8e-47
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-46
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-46
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-46
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-46
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	9e-46
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-45
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-45
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-45
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-44
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-44
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-44
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-44
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-43
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-43
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	8e-43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-37
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-42
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-42
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-42
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-42
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	9e-42
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-41
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-41
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-41
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-41
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-40
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	5e-40
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-40
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	9e-38
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-37
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-32
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-27
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-25
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-24
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-20
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	8e-19
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-18
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-18
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-17
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-17
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	7e-17
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-17
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	8e-17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-16
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-16
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	9e-16
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	2e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-13
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	7e-13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	2e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-08
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-08
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	5e-06

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  330 bits (849), Expect = e-115
 Identities = 120/260 (46%), Positives = 158/260 (60%), Gaps = 8/260 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRHCD 63
           RLQ KVAII G A GIGE TAKLF  +GA V+IADI D+ G +V ++IG     S+ HCD
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 72

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMA 122
           V  ++ V   V   I K+G LDIM+ N GV      +IL+     F R +  N+ G+ + 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSG-PHAYTISKHGLLGLVRSAASELGKHGIR 181
            K+AARVM+  K +GSI+ T S +S   G G  H YT +KH +LGL  S  +ELG++GIR
Sbjct: 133 AKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 191

Query: 182 VNCVSPFGVATPFSAGTIND----VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           VNCVSP+ VA+P            VE    + ANLKG +L+A+ VA+A  +LA DES YV
Sbjct: 192 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 251

Query: 238 SGHDLVVDGGFTAVTNVMSM 257
           SG +LV+DGG+T        
Sbjct: 252 SGLNLVIDGGYTRTNPAFPT 271

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  286 bits (734), Expect = 5e-98
 Identities = 86/250 (34%), Positives = 124/250 (49%), Gaps = 10/250 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           MS  RL GKVA++ G A G+G +  +     GA V+  DI DE G  + + +    A Y 
Sbjct: 1   MSG-RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYV 58

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           H DV    Q +  V  A+  +G L ++ +NAG+    GTI D  + ++ R +  NL G  
Sbjct: 59  HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI-GTIEDYALTEWQRILDVNLTGVF 117

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           + ++   + M     RGSII  +S     G    H YT +K  + GL +S A ELG  GI
Sbjct: 118 LGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           RVN + P  V TP +     D+           G   +   V+   ++LASDES+Y +G 
Sbjct: 177 RVNSIHPGLVKTPMTDWVPEDIF------QTALGRAAEPVEVSNLVVYLASDESSYSTGA 230

Query: 241 DLVVDGGFTA 250
           + VVDGG  A
Sbjct: 231 EFVVDGGTVA 240

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  268 bits (687), Expect = 1e-90
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 9/256 (3%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M+ P L GKVAI+ GA +GIG A A+  A+ G  V+ ADI  +  +   + IG   A+  
Sbjct: 22  MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG-AAAC 80

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV DE+Q+   V   +  +G +D + +NAGV     +++D  +  FDR IA NL G+ 
Sbjct: 81  RVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHL-ASLIDTTVEDFDRVIAINLRGAW 139

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  K+AA  M+     G+I+  +S A  V   G  AY +SK G++ L R  A+EL   GI
Sbjct: 140 LCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFV--CKVANLKGIVL----KAKHVAEAALFLASDES 234
           R N + P  V TP     +   +G +      ++   +       + +A   +FL SD++
Sbjct: 199 RSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA 258

Query: 235 AYVSGHDLVVDGGFTA 250
           + ++G   + DGG  A
Sbjct: 259 SMITGTTQIADGGTIA 274

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  267 bits (685), Expect = 1e-90
 Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 10/252 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RLQGKVA++ G ASG+G    KL    GA V  +DI +  G Q+ + +G   + +   DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER-SMFVRHDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E      +A    + G+L+++ +NAG+  P G +    +  F R +  N     +  +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG--IRV 182
                M      GSII   S +S +       Y+ SK  +  L R+AA    K G  IRV
Sbjct: 121 QGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVS 238
           N + P G+ TP    ++         + + K          + +A+  LFLASDES+ +S
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 239 GHDLVVDGGFTA 250
           G +L  D     
Sbjct: 239 GSELHADNSILG 250

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  263 bits (676), Expect = 3e-89
 Identities = 84/246 (34%), Positives = 125/246 (50%), Gaps = 3/246 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L GK  II G A G+G   A+     GA V++AD+ DE G      +G + A Y+H DV
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E+  +  VAYA E++GS+D + +NAG++     +    + +F + +  NL G  + +K
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIGMK 119

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M      GSI+  +S A  +G +   +Y  SK G+ GL + AA ELG   IRVN 
Sbjct: 120 TVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           V P    TP +A T             +  +  +   +A A + L SD S+YV+G +L V
Sbjct: 179 VHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAV 238

Query: 245 DGGFTA 250
           DGG+T 
Sbjct: 239 DGGWTT 244

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  262 bits (671), Expect = 5e-88
 Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           M   RL+GK+AI+ GA+SGIG A A LFA  GA V++         ++   I     +A+
Sbjct: 1   MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAA 60

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV DE   E  V  A+ ++G LD  ++NAG  G +G I  L +  +  T+ TNL  
Sbjct: 61  ALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTS 120

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTA-STVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           + +A KY    + A    GS+  T+S    T G +G   Y  SK GL+GLV++ A ELG 
Sbjct: 121 AFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGA 179

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            GIRVN + P G  TP +   +                 LK     + +AEAAL+LASD 
Sbjct: 180 RGIRVNALLPGGTDTPANFANLPGAAPETRGFV-EGLHALKRIARPEEIAEAALYLASDG 238

Query: 234 SAYVSGHDLVVDGGFTAVTNVMSM 257
           +++V+G  L+ DGG +      ++
Sbjct: 239 ASFVTGAALLADGGASVTKAAENL 262

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  257 bits (658), Expect = 3e-86
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 12/257 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE----KASYR 60
           R   +V +I G  SG+G ATA   A  GA + + D+  E      +++       +    
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV DE QVE  V    E++G +D  ++NAG+ G          A+FD+ ++ NL G  
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           + ++   ++M      G ++ T S     G      Y  +KHG++GL R++A E G++GI
Sbjct: 130 LGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-------KAKHVAEAALFLASDE 233
           R+N ++P  + TP    ++  ++    + A  + I +       +A  +A    FL SD+
Sbjct: 189 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 248

Query: 234 SAYVSGHDLVVDGGFTA 250
           ++YV+   + +DGG +A
Sbjct: 249 ASYVNATVVPIDGGQSA 265

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  256 bits (656), Expect = 6e-86
 Identities = 87/251 (34%), Positives = 132/251 (52%), Gaps = 8/251 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L  +V I+ G  SGIG ATA+LFA++GA+V++AD+ ++   +V + IG  KA     DV
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-SKAFGVRVDV 82

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
              K  E  V     K+G +D++ +NAG  G  G ++ +    +DR ++ N+ G  +  K
Sbjct: 83  SSAKDAESMVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           Y   VM  N   GSII TTS  +T   +   AY  SK  +  L R+ A +  K GIRVN 
Sbjct: 142 YVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNA 200

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYVSG 239
           V+P  + +P+      + +      ++     +      A+ +AEA LFLASD S + +G
Sbjct: 201 VAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATG 260

Query: 240 HDLVVDGGFTA 250
             L VDGG + 
Sbjct: 261 SILTVDGGSSI 271

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  255 bits (654), Expect = 1e-85
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 3/247 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L+ KVAII GA  GIG  T+++ A  GA V++AD+ +       +S+G   A +   D+
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-RGAVHHVVDL 66

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT-ILDLDMAQFDRTIATNLAGSVMAV 123
            +E  V   + + I+ +G LDI+ +NA  + P    +  + +  +D T   N  G+++  
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           KYA   +++    G+I+  +S  +        AY  +K  +  L R  A++ G+HG+R N
Sbjct: 127 KYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCN 185

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
            ++P  V TP     +      +    +L G + +   +AE   FLASD +A+++G  + 
Sbjct: 186 AIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIA 245

Query: 244 VDGGFTA 250
            D G  A
Sbjct: 246 ADSGLLA 252

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  254 bits (652), Expect = 1e-85
 Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 6/255 (2%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASY 59
           S   L+ KV I+ GA SGIG A AK FA + + V+  ++ ++  NQ+V  +     +   
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV  +K VEE V    E Y  +D++ +NAG+   V  + ++    ++R +A NL  +
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSA 120

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
             + +    +M+    +G I+ T S A   GG     YT++KHGL+GL RS A+  G  G
Sbjct: 121 FYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQG 179

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK---GIVLKAKHVAEAALFLASDESAY 236
           IR   V P  V T    G+    E  +  +  L      + + + +A   +FLASDE+++
Sbjct: 180 IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASF 239

Query: 237 VSGHDLVVDGGFTAV 251
           V+G  +VVDGG T +
Sbjct: 240 VNGDAVVVDGGLTVL 254

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  252 bits (645), Expect = 2e-84
 Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 10/251 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           R  GKV ++ G   GIG    + F   GA V+I D  +  G  +   +    A +  CDV
Sbjct: 6   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDV 63

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E  V+  V+  I ++G LD + +NAG   P     +     F + +  NL G+    K
Sbjct: 64  TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK 123

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A   +  ++  G++I  +S    +G +    Y  +K  +  + ++ A +   +G+RVNC
Sbjct: 124 LALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNC 181

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYVSG 239
           +SP  + TP        +      +             +   V  AA+FLAS+ + + +G
Sbjct: 182 ISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTG 240

Query: 240 HDLVVDGGFTA 250
            +L+V GG   
Sbjct: 241 IELLVTGGAEL 251

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  250 bits (641), Expect = 7e-84
 Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 12/253 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCD 63
           RL GKVAII G   GIG A A  F E GA V+I     ++G +   S+G P++  +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             DE    +      + +G +  + +NAG+A    ++ +   A++ + +A NL G     
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KHGIR 181
           +   + M    +  SII  +S    VG     AY  SK  +  + +SAA +     + +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYV 237
           VN V P  + TP         E     ++      +    +   +A   ++LAS+ES + 
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEE----AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237

Query: 238 SGHDLVVDGGFTA 250
           +G + VVDGG+TA
Sbjct: 238 TGSEFVVDGGYTA 250

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  248 bits (635), Expect = 7e-83
 Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 9/253 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L+GKVA+I GA SG GE  AK FA+ GA V+I D       +V   IG + A     D+
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-DAALAVAADI 64

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E  V+  V  A+ K+G +DI+ +NAG+         ++  +FDR +  N+ G  +   
Sbjct: 65  SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS 124

Query: 125 YAARVMVANK---IRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
                   N        I+   ST +         Y  +K  ++ + ++ A EL    IR
Sbjct: 125 KLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIR 184

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYV 237
           V  ++P    TP     + +    + +      I +    K   +AEAA FL S +++ +
Sbjct: 185 VVALNPVAGETPLLTTFMGEDSEEI-RKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMI 243

Query: 238 SGHDLVVDGGFTA 250
           +G  L VDGG + 
Sbjct: 244 TGVALDVDGGRSI 256

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  248 bits (635), Expect = 1e-82
 Identities = 83/278 (29%), Positives = 119/278 (42%), Gaps = 32/278 (11%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           R++GKVA + GAA G G + A   A+ GA +I  DI   +   VV +  P          
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 56  ---------KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMA 106
                    +      DVRD   ++  V   +E+ G LDI+ +NAG+     T+      
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 107 QFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG 166
            +   I  NLAG    VK     M+A    GSII T+S            Y  +KHG++G
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 167 LVRSAASELGKHGIRVNCVSPFGVATP--------------FSAGTINDVEGFVCKVANL 212
           L+R+   ELG+H IRVN V P  V TP                    +D+         L
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247

Query: 213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
               ++   ++ A LF ASDE+ Y++G  L +D G   
Sbjct: 248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  246 bits (630), Expect = 4e-82
 Identities = 81/256 (31%), Positives = 110/256 (42%), Gaps = 21/256 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
               KVAI+ G +SGIG A       +GA V+   + ++    V              DV
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF--------KIDV 62

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            +E++V+E V    +KYG +DI+ +NAG+      +       + R I  N+ GS +  K
Sbjct: 63  TNEEEVKEAVEKTTKKYGRIDILVNNAGIEQY-SPLHLTPTEIWRRIIDVNVNGSYLMAK 121

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           Y   VM+A    GSII   S  S        AY  SKH LLGL RS A +     IR N 
Sbjct: 122 YTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH----------VAEAALFLASDES 234
           V P  + TP          G        K      +H          VAE   FLASD S
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239

Query: 235 AYVSGHDLVVDGGFTA 250
           ++++G  L VDGG  +
Sbjct: 240 SFITGACLTVDGGLLS 255

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  244 bits (626), Expect = 3e-81
 Identities = 80/259 (30%), Positives = 114/259 (44%), Gaps = 13/259 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
                VA+I GA SGIG ATA   A  G  V           +V   I     +A     
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV DE Q+   V   + K+G LDI+ +NAG+ G    I DL   ++D TIA NL G+ + 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 123 VKYAARVMVANKIRGSIICTTSTA--STVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +      +      G+I+  +S     T    G  AYT +K   + +V+  A ELGKH I
Sbjct: 145 LHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--------KAKHVAEAALFLASD 232
           RVN V P  + T  S  T    E             +        +++ VAE   FL S+
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263

Query: 233 ESAYVSGHDLVVDGGFTAV 251
            + +V+G  + +DGG   +
Sbjct: 264 RARHVTGSPVWIDGGQGLL 282

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  243 bits (623), Expect = 3e-81
 Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 13/253 (5%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDV 64
            +VAI+ GA+SG G A A  F   G  V   D+  E   +   +      +K      DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP--VGTILDLDMAQFDRTIATNLAGSVMA 122
            DE  V   +A  +E++G++D++ +NAG+ G    G +    + QFD+ +A N+ G  + 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +     M+     G I+   S AS V   G  AYT SK  +L L +S A +    GIR 
Sbjct: 122 CRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVS 238
           N V P  + TP +   ++  E    +   L  I       A  VA+A +FLA +++ YV+
Sbjct: 181 NAVCPGMIETPMTQWRLDQPEL---RDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVN 237

Query: 239 GHDLVVDGGFTAV 251
           G  LV+DG +TA+
Sbjct: 238 GAALVMDGAYTAI 250

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  242 bits (621), Expect = 1e-80
 Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----PEKASY 59
             Q +  ++ G  SGIG+  A      GA V+I     +     V  +           Y
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ +E +    V      +G L  +   AG +  +G I  +D   + RT+  N+ G+
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGT 127

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
           +  +K+AAR MV     GS +  +S A++       AY ++K  +  L++ AA ELG   
Sbjct: 128 MYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
           +RVN + P  + T   A      E             L      + VA  A+FL SD ++
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAEL---SSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS 243

Query: 236 YVSGHDLVVDGGFTA 250
           +V+G  + VDGG   
Sbjct: 244 FVTGQVINVDGGQML 258

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  241 bits (617), Expect = 4e-80
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M    L+ KV I+ GA+ GIG A A+ F + G+ VI   I D             K  + 
Sbjct: 1   MGFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---------AKYDHI 51

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV +  QV+ ++ +  ++YGS+ ++ +NAG+    G I  + M ++ R I  NL G  
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESY-GKIESMSMGEWRRIIDVNLFGYY 110

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            A K+A   M+ ++   SI+  +S  +++      AY  SKH ++GL +S A +     +
Sbjct: 111 YASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LL 168

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH----------VAEAALFLA 230
           R N V P  + TP          G        K      +H          VA A  FLA
Sbjct: 169 RCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA 228

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           S E+++++G  L VDGG + 
Sbjct: 229 SREASFITGTCLYVDGGLSI 248

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  239 bits (613), Expect = 1e-79
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 19/264 (7%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           MSK +  GKV ++ GA   IG ATA   AE G  + + D+  E   +  +S+  +  +A 
Sbjct: 1   MSK-KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEAR 59

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CDV  E+ V  TV   +  +G +D +++NAG  G    + D     F R +  N+ G
Sbjct: 60  SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           +   +K  +R M+     G I+ T S A   G     AY  SK  ++ L  +AA +L  +
Sbjct: 120 AFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPY 178

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN-----------LKGIVLK----AKHVA 223
            IRVN +SP  +   F      +++  V                +  + ++       + 
Sbjct: 179 NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIP 238

Query: 224 EAALFLASDESAYVSGHDLVVDGG 247
               FL  D+S++++G +L + GG
Sbjct: 239 GVVAFLLGDDSSFMTGVNLPIAGG 262

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  238 bits (610), Expect = 3e-79
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 11/258 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
              GK  ++ G A GIG A A+ FA  GA V + D++ E G +V  +IG    ++   D+
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG---GAFFQVDL 58

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            DE++    V  A    G +D++ +NA +A P G+ L + + ++ R +  NL   +    
Sbjct: 59  EDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLSA 117

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AAR M      G+I+   S           AY  SK GL+ L RS A +L    IRVN 
Sbjct: 118 LAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYVSG 239
           V+P  +AT      I           + + +       K + VAEA LFLAS+++++++G
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236

Query: 240 HDLVVDGGFTAVTNVMSM 257
             L VDGG TA   +   
Sbjct: 237 AILPVDGGMTASFMMAGR 254

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  237 bits (607), Expect = 2e-78
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M++ RL  K+A+I GA SGIG A AK F   GA V I   + ++ +  ++ IG   A   
Sbjct: 23  MTQ-RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG-AVGI 80

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D  +  +++        + G +D+++ NAG  G +  + ++   Q+D T   N+ G +
Sbjct: 81  QADSANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKGVL 139

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             V+ A  ++       S++ T STA + G      Y  SK  L    R+   +L   GI
Sbjct: 140 FTVQKALPLLARG---SSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGI 196

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVAN--LKGIVLK----AKHVAEAALFLASDES 234
           R+N +SP    T                + N     + +     A+ VA AALFLASD+S
Sbjct: 197 RINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDS 256

Query: 235 AYVSGHDLVVDGGFTAV 251
           ++V+G +L VDGG   V
Sbjct: 257 SFVTGAELFVDGGSAQV 273

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  236 bits (605), Expect = 6e-78
 Identities = 83/274 (30%), Positives = 124/274 (45%), Gaps = 28/274 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           +++GKVA I GAA G G + A   A  GA +I  D+  +L    +    P+         
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                +      DVRD   ++  V   + + G LDI+ +NA +A     +  +D   +  
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            I  NL G+ +  + A   ++A K  GSI+ T+S     G      Y  SKHGL GL+R+
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 171 AASELGKHGIRVNCVSPFGVATP--------------FSAGTINDVEGFVCKVANLKGIV 216
            A ELG   IRVN V P  VATP                  T+ D +    ++  L    
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           ++   ++ A LFL SD++ Y++G  L VDGG   
Sbjct: 265 VEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  232 bits (594), Expect = 6e-77
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 15/252 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKV I+  AA GIG+A A  FA  GA VI  DI +    ++    G      R  DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG---IQTRVLDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             +KQ+++       +   LD++++ AG     GT+LD +   +D ++  N+    + +K
Sbjct: 60  TKKKQIDQFA----NEVERLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGKHGIRVN 183
                M+A K  G+II  +S AS+V G      Y+ +K  ++GL +S A++  + GIR N
Sbjct: 115 AFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESAYVS 238
           CV P  V TP     I           +            A+ +A   ++LASDESAYV+
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 239 GHDLVVDGGFTA 250
           G+ +++DGG++ 
Sbjct: 234 GNPVIIDGGWSL 245

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  232 bits (595), Expect = 1e-76
 Identities = 74/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L G+VA+I G ASG+G A    F   GA V + D   E   ++  + G   A     DV
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN-AVGVVGDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD----MAQFDRTIATNLAGSV 120
           R  +  +      +  +G +D +  NAG+      + DL      A FD     N+ G +
Sbjct: 61  RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            AVK     +V++  RGS++ T S A      G   YT +KH ++GLVR  A EL  H +
Sbjct: 121 HAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-V 177

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL---------KAKHVAEAALFLAS 231
           RVN V+P G+ T     +   +         L  ++            +    A +F A+
Sbjct: 178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFAT 237

Query: 232 DE-SAYVSGHDLVVDGGFTA 250
              S   +G  L  DGG   
Sbjct: 238 RGDSLPATGALLNYDGGMGV 257

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  232 bits (595), Expect = 1e-76
 Identities = 83/271 (30%), Positives = 114/271 (42%), Gaps = 27/271 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           +L+G+VA I GAA G G A A   A  GA +I  DI  +L + V                
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 56  ------KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
                 +      D RD  ++ + V   +   G LDI+ +NAGVA       D+    F 
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFR 126

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
             +  N+ G+   V   A  ++     GSII  +S A          YT SKH + GL R
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186

Query: 170 SAASELGKHGIRVNCVSPFGVATP----------FSAGTINDVEGFVCKVANLKGIVLKA 219
           + A+ELGKH IRVN V P  V TP            A   N     V        +  + 
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVA-EP 245

Query: 220 KHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           + +A+   +LASDES  V+   + VD G T 
Sbjct: 246 EDIADTVCWLASDESRKVTAAQIPVDQGSTQ 276

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  232 bits (594), Expect = 2e-76
 Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----PEKAS 58
            R   KVAII G+++GIG ATA LFA  GA V I     E   +    I       +  +
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATN 115
               DV  +   +E ++  + K+G LDI+ +NAG A P     T     +  +D T+  N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISKHGLLGLVRSAASE 174
           L   +   K A   + + K  G I+  +S AS +  +     Y+I+K  +    R+ A +
Sbjct: 122 LRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAID 179

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--------KAKHVAEAA 226
           L +HGIRVN +SP  VAT F +      E      + +  +          + + +AE  
Sbjct: 180 LIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI 239

Query: 227 LFLASDESA-YVSGHDLVVDGGFTAVTN 253
            FLA  +++ Y+ GH LVVDGG + +  
Sbjct: 240 AFLADRKTSSYIIGHQLVVDGGSSLIMG 267

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  231 bits (592), Expect = 4e-76
 Identities = 83/269 (30%), Positives = 119/269 (44%), Gaps = 24/269 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
            LQG+VA I GAA G G + A   A  GA +I  DI   +   V  +             
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 56  ------KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
                 KA  R  DVRD+  + E VA  +E++G LD++ +NAGV    G + +L   Q+D
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWD 130

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
             I  NL G+   ++     M+     GSI+  +S+A      G   Y+ SKHGL  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 170 SAASELGKHGIRVNCVSPFGVATP--------FSAGTINDVEGFVCKVANLKGIVLKAKH 221
           + A ELG++GIRVN + P+ V TP                       +       + A  
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250

Query: 222 VAEAALFLASDESAYVSGHDLVVDGGFTA 250
           VA+   +LA D S  ++G  + VD G   
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGALK 279

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  229 bits (586), Expect = 1e-75
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 17/262 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+GK A+I G+A GIG A A+ +   GA V IADI  E   Q  + IGP  A     DV
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP-AAYAVQMDV 63

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             +  ++  +A  +E  G LDI+ +NA +   +  I+++    +++  A N+AG++  ++
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQ 122

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AAR M+A    G II   S A   G +    Y  +K  ++ L +SA  +L KH I VN 
Sbjct: 123 AAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNA 182

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLK----AKHVAEAALFLASDES 234
           ++P  V      G       +  +          + +       A+ +   A+FLAS ES
Sbjct: 183 IAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAES 242

Query: 235 AYVSGHDLVVDGGFTAVTNVMS 256
            Y+      VDGG     N MS
Sbjct: 243 DYIVSQTYNVDGG-----NWMS 259

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  229 bits (586), Expect = 1e-75
 Identities = 84/258 (32%), Positives = 120/258 (46%), Gaps = 17/258 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
               RL GK AII GA +GIG+  A  FA  GA V+++DI  +  N VV  I     +A 
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CD+  E+++     +AI K G +DI+ +NAG  GP     D+ MA F R    N+  
Sbjct: 64  ACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFS 121

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
                +  A  M  N   G I+  TS A+        +Y  SK     LVR+ A +LG+ 
Sbjct: 122 FFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180

Query: 179 GIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
            IRVN ++P  + T      I     +        L+   ++     + +A AALFL S 
Sbjct: 181 NIRVNGIAPGAILTDALKSVITPEIEQKM------LQHTPIRRLGQPQDIANAALFLCSP 234

Query: 233 ESAYVSGHDLVVDGGFTA 250
            +++VSG  L V GG   
Sbjct: 235 AASWVSGQILTVSGGGVQ 252

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  229 bits (586), Expect = 2e-75
 Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 10/252 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+ KVA++  +  GIG A A+  A+ GA V+++  + E  ++ V+++  E    +   C
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC 70

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
            V   +  E  VA A+  +G +DI+ SNA V    G I+D     +D+ +  N+  +V+ 
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLM 130

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K     M      GS++  +S  +         Y +SK  LLGL ++ A EL    IRV
Sbjct: 131 TKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 189

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           NC++P  + T FS     D      K    + + ++     +  A    FL S++++Y++
Sbjct: 190 NCLAPGLIKTNFSQVLWMDKAR---KEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYIT 246

Query: 239 GHDLVVDGGFTA 250
           G  +VV GG  +
Sbjct: 247 GETVVVGGGTAS 258

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  227 bits (581), Expect = 1e-74
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 14/255 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L  KV +I G    +G   A+  AE GA +++A    E    V   +     +A     
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT 67

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+ D+ QV   V   ++ YG +D++ +NA     +    +         I   + G++  
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           ++     +  +K  G+++   S       +   AY ++K  LL + ++ A+ELG+ GIRV
Sbjct: 128 IQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKV------ANLKGIVLK----AKHVAEAALFLASD 232
           N V P  +             G           A   G  LK       VA A LF+ASD
Sbjct: 186 NSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245

Query: 233 ESAYVSGHDLVVDGG 247
            ++ ++G  L V+ G
Sbjct: 246 LASGITGQALDVNCG 260

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  226 bits (579), Expect = 2e-74
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 12/258 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           M K RL  +VAI+ G A  IG A     AE GA VIIAD+ + +  + V  +  E    S
Sbjct: 6   MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVS 65

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV + + V+  V    E+ G +DI+ + AG+        D+   Q+ + +  NL G
Sbjct: 66  SVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELG 176
              + +   R+M+  K +G I+   S +  +        AY  SK G+   +RS A+E  
Sbjct: 126 MFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
            HGIR N V+P  + T  +   +   E      A + G  +        VA    FLASD
Sbjct: 185 PHGIRANAVAPTYIETTLTRFGMEKPEL---YDAWIAGTPMGRVGQPDEVASVVQFLASD 241

Query: 233 ESAYVSGHDLVVDGGFTA 250
            ++ ++G  + VD GFT 
Sbjct: 242 AASLMTGAIVNVDAGFTV 259

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  223 bits (570), Expect = 5e-73
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 11/253 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
           RL GK A+I GA  GIG   A+ FA  GA ++++       +    ++G +         
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ +     E    A E +G LD++ +NAG++ P   ++D D   FD TIA NL    +
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP-QPVVDTDPQLFDATIAVNLRAPAL 135

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
                 + MVA    G+II   S A+       +AY  SK GL+   +  A ELG HGIR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYV 237
            N V P  V T        D          +  I L        V++A ++LASD ++ +
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAK---SAPMIARIPLGRFAVPHEVSDAVVWLASDAASMI 252

Query: 238 SGHDLVVDGGFTA 250
           +G D+ VDGG+T 
Sbjct: 253 NGVDIPVDGGYTM 265

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  222 bits (569), Expect = 1e-72
 Identities = 81/273 (29%), Positives = 118/273 (43%), Gaps = 32/273 (11%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
            L GKVA I GAA G G A A   A  GA +I  D+ D++ +       PE         
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                +   R  DVRD + +   +   +++ G LDI+ +NAG+A      +      +  
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDDGWHD 124

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH----AYTISKHGLLG 166
            I  NL G    +K A   +V     GSI+  +S+A   G          Y  +KHG++G
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 167 LVRSAASELGKHGIRVNCVSPFGVATP---------FSAGTINDVEGFVCKVANLKGIVL 217
           L+R  A+ L    IRVN + P GV TP         + A      +        +   VL
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVL 244

Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
             + VA A  +L SD++ Y++G  L VD GF  
Sbjct: 245 APEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  221 bits (565), Expect = 1e-72
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 25/256 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGPEKASYRHCDV 64
                 ++ G + GIG+A  +L  ++    +I  DIQ             E   +   D+
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA--------ENLKFIKADL 53

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             ++ +   +     K  S D ++ NAG+    G+I D+D+    + +  N+  S+  +K
Sbjct: 54  TKQQDITNVLDII--KNVSFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                +   K+  SI+   S    +      AYT+SK  +  + +S A +L K+ IRVN 
Sbjct: 111 GLENNL---KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNT 167

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH----------VAEAALFLASDES 234
           V P  V T      I      V    +      + +           +AE  +FL SD+S
Sbjct: 168 VCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKS 227

Query: 235 AYVSGHDLVVDGGFTA 250
            +++G  + +DGG+TA
Sbjct: 228 KFMTGGLIPIDGGYTA 243

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  221 bits (566), Expect = 2e-72
 Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 12/256 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KA 57
           M K  L+GKV +I G+++G+G++ A  FA   A V++     E   N V+  I     +A
Sbjct: 1   MYK-DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA 59

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                DV  E  V   V  AI+++G LD+M +NAG+  P  +  ++ ++ +++ I TNL 
Sbjct: 60  IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLT 118

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+ +  + A +  V N I+G++I  +S    +       Y  SK G+  +  + A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            GIRVN + P  + TP +A    D E    +      I +      + +A  A +LAS E
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQ---RADVESMIPMGYIGEPEEIAAVAAWLASSE 235

Query: 234 SAYVSGHDLVVDGGFT 249
           ++YV+G  L  DGG T
Sbjct: 236 ASYVTGITLFADGGMT 251

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  219 bits (561), Expect = 1e-71
 Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 17/252 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
             +GKVA++ GAA GIG A        GA V +AD             G     +   D+
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA---------GIAADLHLPGDL 75

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           R+    +          G LDI+ +NAGV    G I +   A +  ++  N+       +
Sbjct: 76  REAAYADGLPGAVAAGLGRLDIVVNNAGVISR-GRITETTDADWSLSLGVNVEAPFRICR 134

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A  +M A    G+I+   S      G G   Y ++K  L  L +    +    GIR+N 
Sbjct: 135 AAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINA 193

Query: 185 VSPFGVATPFSAGTINDVEGFVCKV--ANLKGIVL----KAKHVAEAALFLASDESAYVS 238
           V P  V TP              +      + + L    + + +A+  LFLASD + Y+ 
Sbjct: 194 VCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLC 253

Query: 239 GHDLVVDGGFTA 250
           G  + V+GG   
Sbjct: 254 GSLVEVNGGKAV 265

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  218 bits (557), Expect = 4e-71
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 13/251 (5%)

Query: 5   RLQGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYR 60
            L+GKV ++  AA +GIG  TA+     GA V+I+D  +    +    +   G  +    
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CDV   + V+  +   +EK G LD++ +NAG+ G    ++D+   ++DR +   L   +
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQ-TPVVDMTDEEWDRVLNVTLTSVM 137

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            A + A R        G I+   S            Y  +K G++ L R +A E  + G+
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAY 236
           R+N VSP      F   T +                     +   VA    FLASD S+Y
Sbjct: 198 RINAVSPSIARHKFLEKTSSSEL----LDRLASDEAFGRAAEPWEVAATIAFLASDYSSY 253

Query: 237 VSGHDLVVDGG 247
           ++G  + V   
Sbjct: 254 MTGEVVSVSSQ 264

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  218 bits (558), Expect = 7e-71
 Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 18/267 (6%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----PEKAS 58
            R  GK  II G+++GIG + A +FA+ GA V I    ++   +    I       EK +
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATNLA 117
               DV +    ++ +   + K+G +DI+ +NAG     GT   D  +  + +T   N  
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTS-TASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
             +   +     ++  K  G I+  +S  A     SG   Y  +K  L    R  A +L 
Sbjct: 142 AVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI 199

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--------KAKHVAEAALF 228
           +HG+RVN VSP  VAT F               + +             K + +A   +F
Sbjct: 200 QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF 259

Query: 229 LAS-DESAYVSGHDLVVDGGFTAVTNV 254
           LA  + S+Y+ G  +V DGG T V  +
Sbjct: 260 LADRNLSSYIIGQSIVADGGSTLVMGM 286

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  217 bits (556), Expect = 1e-70
 Identities = 71/285 (24%), Positives = 107/285 (37%), Gaps = 45/285 (15%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           R+Q KV ++ G A G G + A   AE GA +I+ DI  ++                    
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                KA     DVRD   V   +A A+ ++G LD++ +NAG+         L +  F  
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA---HLPVQAFAD 123

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAYTI 159
               +  G +  V  A   + +     SII T S A  +            G G   Y+ 
Sbjct: 124 AFDVDFVGVINTVHAALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180

Query: 160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP--------------FSAGTINDVEGF 205
           +K  +       A++L    IR N + P  V T                 A +  D    
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA 240

Query: 206 VCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
              +  +    ++A  ++ A  FLASDES YV+G    VD G   
Sbjct: 241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  217 bits (554), Expect = 2e-70
 Identities = 77/268 (28%), Positives = 116/268 (43%), Gaps = 20/268 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPEKAS 58
           PR   K  II G+++GIG  TA LFA+ GA V I     E   +    I       ++ +
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATN 115
               DV  E   ++ +   ++++G +D++ +NAG A P     T  D  +  + +T+  N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISKHGLLGLVRSAASE 174
           L   +   K     +VA+K  G I+  +S  +          Y I+K  L    RS A +
Sbjct: 122 LQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAID 179

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL--------KAKHVAEAA 226
           L K GIRVN VSP  V T F+       +        +             K +H+A   
Sbjct: 180 LAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII 239

Query: 227 LFLASDE-SAYVSGHDLVVDGGFTAVTN 253
           LFLA    S Y+ G  +V DGG + V  
Sbjct: 240 LFLADRNLSFYILGQSIVADGGTSLVMG 267

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  214 bits (548), Expect = 5e-70
 Identities = 73/250 (29%), Positives = 107/250 (42%), Gaps = 14/250 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L G+  ++ GA  GIG  T +     GA V+         + +V             D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D +  E     A+   G +D++ +NA VA      L++    FDR+   NL   +   +
Sbjct: 62  GDWEATER----ALGSVGPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR ++A  + G+I+  +S  S    +    Y  +K  L  L +  A ELG H IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGH 240
           V+P  V T     T +D          L  I L    + +HV  A LFL SD S   +G 
Sbjct: 177 VNPTVVMTSMGQATWSDPHK---AKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 233

Query: 241 DLVVDGGFTA 250
            L V+GGF A
Sbjct: 234 TLPVEGGFWA 243

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  215 bits (549), Expect = 7e-70
 Identities = 69/264 (26%), Positives = 102/264 (38%), Gaps = 17/264 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE----K 56
           M    L   VA++ G +SGIG AT +L  E GA V       E      S++       +
Sbjct: 1   MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR 60

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                CDV D  QV           G   I+ +NAG  G V T  +     +   +    
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQ-GRVSTFAETTDEAWSEELQLKF 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
              +  V+     + +     +I+C  S  ++       A + ++ G+  LVRS A E  
Sbjct: 120 FSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178

Query: 177 KHGIRVNCVSPFGVATPFSAG-------TINDVEGFVCKVANLKGIVL----KAKHVAEA 225
             G+RVN +    V +               D   +  ++A  K I L    K    A A
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238

Query: 226 ALFLASDESAYVSGHDLVVDGGFT 249
            LFLAS  SAY +G  + V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  213 bits (546), Expect = 1e-69
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 16/253 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
           R + KV I+ G+  GIG+A A+  A  GA V++ADI  E    V   I  +   A     
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV--GTILDLDMAQFDRTIATNLAGSV 120
           DV D +  +      + ++G +D + +NA + G +    +L +D   + + ++ NL G++
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              +   + M      G+I+     +ST      + Y ++K G+ GL +  + ELG   I
Sbjct: 126 WCTRAVYKKMTKRG-GGAIVN---QSSTAAWLYSNYYGLAKVGINGLTQQLSRELGGRNI 181

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
           R+N ++P  + T  +  T             +KG+ L        +    LFL SDE+++
Sbjct: 182 RINAIAPGPIDTEANRTTTPKEM----VDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASW 237

Query: 237 VSGHDLVVDGGFT 249
           ++G    VDGG  
Sbjct: 238 ITGQIFNVDGGQI 250

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  213 bits (546), Expect = 2e-69
 Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 16/255 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEK 56
             +  L  ++ ++ GA+ GIG   A  +A +GA VI+    +E   QV S I    G + 
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64

Query: 57  ASYR-HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
             +         +  ++        Y  LD +  NAG+ G V  + + +   +   +  N
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVN 124

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           +  + M  +    +++ +   GS++ T+S+    G +   AY  SK    G+++  A E 
Sbjct: 125 VNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY 183

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            +  +RVNC++P G  T   A      +        LK        +    L+L  D+S 
Sbjct: 184 QQ-RLRVNCINPGGTRTAMRASAFPTED-----PQKLK----TPADIMPLYLWLMGDDSR 233

Query: 236 YVSGHDLVVDGGFTA 250
             +G       G   
Sbjct: 234 RKTGMTFDAQPGRKP 248

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  214 bits (547), Expect = 2e-69
 Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 10/254 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+G  A++ G + GIG A  +  A  GA V      ++  ++ +     +        C
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC 77

Query: 63  DVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           D+    + ++ +      + G L+I+ +NAGV        D     ++  + TN   +  
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYH 136

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A  ++ A++  G++I  +S A          Y+ SK  +  + +S A E  K  IR
Sbjct: 137 LSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVAN-LKGIVL----KAKHVAEAALFLASDESAY 236
           VN V+P  + TP     I        ++ N +    +    K + V+    FL    ++Y
Sbjct: 196 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 255

Query: 237 VSGHDLVVDGGFTA 250
           ++G  +  DGGFTA
Sbjct: 256 ITGQIIWADGGFTA 269

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  212 bits (543), Expect = 4e-69
 Identities = 74/255 (29%), Positives = 110/255 (43%), Gaps = 11/255 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           M     QGK AI++G   G+G AT +   E GA V++    +    ++    GP +    
Sbjct: 1   MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP-RVHAL 59

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+ D  ++    A A +  G++D+++ NAGV+        +  A +DR  A N  G+ 
Sbjct: 60  RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL-EPFDQVSEASYDRQFAVNTKGAF 118

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             V+    ++      GSI+ T+S A   G  G   Y+ SK  L+      A+EL   GI
Sbjct: 119 FTVQRLTPLIREG---GSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGI 175

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDESA 235
           RVN VSP  + TP                     I        A  VA A LFLA + + 
Sbjct: 176 RVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-AT 234

Query: 236 YVSGHDLVVDGGFTA 250
           + +G  L VDGG   
Sbjct: 235 FTTGAKLAVDGGLGQ 249

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  213 bits (545), Expect = 4e-69
 Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 7/251 (2%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKAS 58
            K   +G++A++ G  +G+G   A+  +  G  V+I   + ++ +     I         
Sbjct: 27  GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVR 86

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CDV D  QV    A    ++  LD++ +NAG   P   + ++   Q++  +A NL G
Sbjct: 87  AVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146

Query: 119 SVMAVKYAARVMVANKIR-GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           + +  ++A R+M A   R G II   S ++         YT +KH + GL +S A +   
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRM 206

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD-ESAY 236
           H I    +     AT  +A     V     +VA      +  +H+AEA +++AS   SA 
Sbjct: 207 HDIACGQIDIGNAATDMTARMSTGVLQANGEVA--AEPTIPIEHIAEAVVYMASLPLSAN 264

Query: 237 VSGHDLVVDGG 247
           V    ++    
Sbjct: 265 VLTMTVMATRM 275

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  212 bits (543), Expect = 5e-69
 Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 13/252 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L   VAI+ GAA+GIG A A  FA+ GA V++ D++ E    V ++I     KA    C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           +V DE+  E  +  A++++G + ++ +NAG  GP     D+ M+ F+     NL      
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            + AA  M      G+I+  +S A         +Y  SK  +  L R+ A ++G  GIRV
Sbjct: 127 SQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRV 185

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N ++P  + T   A  +        + A LK   L     A+ +A AALFL S  +A++S
Sbjct: 186 NAIAPGAIKTDALATVLTPEI----ERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241

Query: 239 GHDLVVDGGFTA 250
           G  L V GG   
Sbjct: 242 GQVLTVSGGGVQ 253

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  211 bits (541), Expect = 7e-69
 Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 14/250 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
              G  A++ GA  GIG  T K     GA V+     +     +              D+
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D    E+    A+   G +D++ +NA +       L++    FDR+ + NL       +
Sbjct: 62  GDWDATEK----ALGGIGPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQVSQ 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR M+   + GSI+  +S  + V       Y+ +K  +  L ++ A ELG H IRVN 
Sbjct: 117 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGH 240
           V+P  V T        D E         +   L    + + V  + LFL SD SA  SG 
Sbjct: 177 VNPTVVLTDMGKKVSADPEF---ARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG 233

Query: 241 DLVVDGGFTA 250
            ++VD G+ A
Sbjct: 234 GILVDAGYLA 243

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  212 bits (542), Expect = 1e-68
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 15/258 (5%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           +    L GK A+I GA++GIG+  A  +AE GA V +A    +    V   I     KA 
Sbjct: 25  LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKAL 84

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CDV    QV   +     + G +DI   NAG+      +LD+ + +F R   TN+ G
Sbjct: 85  PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQDTNVTG 143

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELG 176
             +  + AAR MV   + G+II T S +  +         Y  SK  ++ L ++ A EL 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA 203

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
            H IRVN VSP  + T       +    +         I L      + +    L+LAS 
Sbjct: 204 PHQIRVNSVSPGYIRTELVEPLADYHALW------EPKIPLGRMGRPEELTGLYLYLASA 257

Query: 233 ESAYVSGHDLVVDGGFTA 250
            S+Y++G D+V+DGG+T 
Sbjct: 258 ASSYMTGSDIVIDGGYTC 275

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  213 bits (545), Expect = 1e-68
 Identities = 87/274 (31%), Positives = 128/274 (46%), Gaps = 29/274 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           RLQGKVA I GAA G G   A   A+ GA ++  D+  +  N   +   PE         
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                +   R  DVRD   ++  V  A+ ++G +DI+ SN G++   G ++ L   Q+  
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSD 161

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            + TNL G+  A +     M+     GS+I  +ST    G  G   Y  SKHG+ GL+ S
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLS 221

Query: 171 AASELGKHGIRVNCVSPFGVATP--------------FSAGTINDVEGFVCKVANLKGIV 216
            A+E+G+H IRVN V+P  V T                   T  D      ++  L    
Sbjct: 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281

Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           ++ + V+ A  +LASDE+ Y+ G  + VDGG  A
Sbjct: 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  211 bits (540), Expect = 2e-68
 Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 27/264 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEK 56
           M+   + GKVA++ GAA GIG A A+     GA V + D   E G Q  +++     P+K
Sbjct: 1   MAH-MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK 59

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
             +  CDV D++Q+ +T    ++ +G LDI+ +NAGV              +++T+  NL
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE---------KNWEKTLQINL 110

Query: 117 AGSVMAVKYAARVMVANKI--RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA-- 172
              +         M        G II  +S A  +  +    Y  SKHG++G  RSAA  
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-------GIVLKAKHVAEA 225
           + L   G+R+N + P  V T        +                     +L    +A  
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 230

Query: 226 ALFLASDESAYVSGHDLVVDGGFT 249
            + L  D++  ++G  + +     
Sbjct: 231 LITLIEDDA--LNGAIMKITTSKG 252

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  210 bits (536), Expect = 5e-68
 Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 12/255 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L G+ AI+ G + GIG A A+   + GA V IAD+       VV+ +          DV
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-NGGFAVEVDV 67

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
                V+  +  AI+  G  D++ +NAGV+  +   +D+   ++D     N  G  +A +
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQ 126

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A R  +A+  +G I+ T S A+ VG      Y+ SK  + G  ++ A E+    IRVNC
Sbjct: 127 IACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNC 186

Query: 185 VSPFGVATPFSAGTINDVEGFVCKV------ANLKGIVLK----AKHVAEAALFLASDES 234
           V P  V T      I                  +    L      + VA+  +FLASD +
Sbjct: 187 VCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA 246

Query: 235 AYVSGHDLVVDGGFT 249
            +++G  + V GG  
Sbjct: 247 RFMTGQGINVTGGVR 261

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  209 bits (535), Expect = 1e-67
 Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 5/238 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +   K+AI+ GA SG+G A A   A  G  V +A  + +   +  + IG + A     DV
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDV 83

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   V       +EK+G +D++++NAG   P   + DL  AQ+ + + TNL G  +  +
Sbjct: 84  TDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQ 143

Query: 125 YAARVMVANKIR-GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
            A RVM A + R G II   S ++T        YT +KH + GL +S + +   H I   
Sbjct: 144 EAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD-ESAYVSGH 240
            +      TP +      V      +      V+   HVA A +++AS    A V   
Sbjct: 204 QIDIGNADTPMAQKMKAGVPQADLSIK--VEPVMDVAHVASAVVYMASLPLDANVQFM 259

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  206 bits (527), Expect = 1e-66
 Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 10/258 (3%)

Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KA 57
           M+    L+G  A++ G + GIG    +  A  GA V       +  N  ++    +  K 
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
               CD+    + +E +      + G L+I+ +NAG+        D  +  +   ++ N 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINF 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
             +      A   + A++ RG+++  +S +  +       Y  +K  +  L R  A E  
Sbjct: 120 EAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 178

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASD 232
           K  IRVN V P  +AT     TI D E        +    L    + K +A    FL   
Sbjct: 179 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 238

Query: 233 ESAYVSGHDLVVDGGFTA 250
            ++YV+G  + VDGG  A
Sbjct: 239 AASYVTGQIIYVDGGLMA 256

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  205 bits (524), Expect = 6e-66
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 17/261 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE---KASYR 60
            +  K A+I G+ SGIG A A+  A+ GA +++      +    V   +         + 
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+    ++ + +A   +++G  DI+ +NAGV   V  I D  + Q+DR IA NL+ S 
Sbjct: 82  PADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSF 140

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++ A   M      G II   S    V      AY  +KHG++GL ++ A E+ + G+
Sbjct: 141 HTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGV 199

Query: 181 RVNCVSPFGVATPFSAGTINDV-------EGFVCKVANLKGIVLK----AKHVAEAALFL 229
            VN + P  V TP     I D        E  V     LKG   K     + VA  AL+L
Sbjct: 200 TVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYL 259

Query: 230 ASDESAYVSGHDLVVDGGFTA 250
           A D++A ++G  + +DGG+TA
Sbjct: 260 AGDDAAQITGTHVSMDGGWTA 280

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  203 bits (519), Expect = 2e-65
 Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 12/252 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL G  A + GA SGIG    + FA  GA +I+ D +    ++    +G   A+    DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D + +    A   E    + I+ ++AG+A  +   L+ D A + + +A N+ G   A +
Sbjct: 68  TDAEAMTAAAA-EAEAVAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASR 125

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGKHGIRV 182
              R MVA    G+I+   S + T+        +Y  SK  +  L R+ A+E    G+RV
Sbjct: 126 AFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRV 184

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVS 238
           N ++P  VAT  +       E        L    +    +   +A AALFLAS  ++YV+
Sbjct: 185 NALAPGYVATEMTLKMRERPEL---FETWLDMTPMGRCGEPSEIAAAALFLASPAASYVT 241

Query: 239 GHDLVVDGGFTA 250
           G  L VDGG+T 
Sbjct: 242 GAILAVDGGYTV 253

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  204 bits (521), Expect = 2e-65
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
             +GK A+I G A G+G + A   AE GA + I D  +            +         
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 56  -----KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR 110
                +      DV+D   +E  VA A +  G +DI  +NAG++  +  + +++ AQ+D 
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDE 125

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            I TNL G+   +   A  M+     G I+  +S           +Y  SK G++GL + 
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184

Query: 171 AASELGKHGIRVNCVSPFGVATP--------------FSAGTINDVEGFVCKVANLKGIV 216
           AA +L  +GI VN V+P  + TP                  T+ DVE     +       
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

Query: 217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA 250
           LK + V  A LFL  + S++++G  L +D G TA
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  201 bits (513), Expect = 9e-65
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 16/247 (6%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKA 57
               L+G+V ++ GAA GIG A A+ +A HGA V++    +    +V   I     P+  
Sbjct: 8   HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPL 67

Query: 58  SY-RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
               + +    +Q  E  A    ++G LD +  NA + GP   +  L    F + +  N+
Sbjct: 68  IIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL- 175
             + M  +    ++  ++   SI  T+S+    G +   AY +SK    GL+++ A EL 
Sbjct: 128 NATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELE 186

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
           G   +R N ++P    T   A    D         N        + +    L+L   +S 
Sbjct: 187 GVTAVRANSINPGATRTGMRAQAYPDEN-----PLNNPA----PEDIMPVYLYLMGPDST 237

Query: 236 YVSGHDL 242
            ++G  L
Sbjct: 238 GINGQAL 244

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  202 bits (516), Expect = 1e-64
 Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 16/254 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+GKVA + G++ GIG A A+ +A+ GA V I         +           +    C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-LDMAQFDRTIATNLAGSVM 121
           ++ D K VEET++   + +G++D+  +NAGV    G  +D  +   +++ I+ +L G   
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGKHG 179
                 ++   N  +GS+I T+S +  +         Y  +K     L +S A E     
Sbjct: 151 CSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
            RVN +SP  + T  +     D++         +   L      + +    L+LAS+ S 
Sbjct: 210 -RVNTISPGYIDTDITDFASKDMKAKW-----WQLTPLGREGLTQELVGGYLYLASNAST 263

Query: 236 YVSGHDLVVDGGFT 249
           + +G D+V+DGG+T
Sbjct: 264 FTTGSDVVIDGGYT 277

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  201 bits (514), Expect = 1e-64
 Identities = 81/253 (32%), Positives = 107/253 (42%), Gaps = 13/253 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           KVA++ GA  GIG+A A    + G  V IAD  D     V S I      A     DV D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             QV   V  A +  G  D++ +NAGVA P   I  +     D+    N+ G +  ++ A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
                     G II   S A  VG      Y+ SK  + GL ++AA +L   GI VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 187 PFGVATPFSAGTINDVEGFVCKVAN------LKGIVLK----AKHVAEAALFLASDESAY 236
           P  V TP  A     V     K          K I L      + VA    +LAS +S Y
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241

Query: 237 VSGHDLVVDGGFT 249
           ++G  L++DGG  
Sbjct: 242 MTGQSLLIDGGMV 254

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  201 bits (513), Expect = 1e-64
 Identities = 69/255 (27%), Positives = 100/255 (39%), Gaps = 21/255 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGPEKASYRHCD 63
              GK   + GA  GIG ATA  F E GA V   D    +      + +          D
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEV---------MD 54

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D  QV +     + +   LD + + AG+    G    L    + +T A N+ G+    
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRM-GATDQLSKEDWQQTFAVNVGGAFNLF 113

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +         +  G+I+   S A+     G  AY  SK  L  L  S   EL   G+R N
Sbjct: 114 QQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVAN-----LKGIVLK----AKHVAEAALFLASDES 234
            VSP    T          +    ++         GI L      + +A   LFLASD +
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232

Query: 235 AYVSGHDLVVDGGFT 249
           ++++  D+VVDGG T
Sbjct: 233 SHITLQDIVVDGGST 247

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  201 bits (513), Expect = 2e-64
 Identities = 88/251 (35%), Positives = 130/251 (51%), Gaps = 15/251 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK  ++ GAASGIG A   LFA  GA ++  D ++ L  + V+++   +A     DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D K VE   A A+E++G L  +   AGVA       +L +  +++ +  NL GS +  +
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLVAR 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A  V+      GS++ T S A  +G  G   Y   K G++GL R+ A EL + G+RVN 
Sbjct: 121 KAGEVLEEG---GSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           + P  + TP +AG              +    L      + VA+AALFL S+ESAY++G 
Sbjct: 177 LLPGLIQTPMTAGLPPWA-----WEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 231

Query: 241 DLVVDGGFTAV 251
            L VDGG + V
Sbjct: 232 ALYVDGGRSIV 242

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  200 bits (511), Expect = 3e-64
 Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 12/255 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GK A++ G+ SGIG   A++ A  GA +++    D        +    KA +   D+ 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D  Q+E   A A  ++G +DI+ +NAG+   V  +    +  +D+ IA NL+      + 
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRL 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   M A    G II   S    VG +G  AY  +KHG++GL +    E     +  N +
Sbjct: 121 ALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179

Query: 186 SPFGVATPFSAGTIND------VEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
            P  V TP     I+D                 +          +H+ E  LFL S+  +
Sbjct: 180 CPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGS 239

Query: 236 YVSGHDLVVDGGFTA 250
            V G    VDGG+ A
Sbjct: 240 QVRGAAWNVDGGWLA 254

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  199 bits (509), Expect = 5e-64
 Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 18/258 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           M++ RL+ K+A+I G A+GIG A A+ FA  GA + IAD+      +  ++I     +  
Sbjct: 1   MTQ-RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVL 57

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
              CDV     VE      I  +G  DI+ +NAG+        +L   Q+ +T   N+  
Sbjct: 58  TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDS 116

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
             +  K     M  N   G II  TST   +       Y  +K   +G  R+ AS+LGK 
Sbjct: 117 GFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD 175

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL------KAKHVAEAALFLASD 232
           GI VN ++P  V T  +  +             L  ++           +  AA FLASD
Sbjct: 176 GITVNAIAPSLVRTATTEASALSA-----MFDVLPNMLQAIPRLQVPLDLTGAAAFLASD 230

Query: 233 ESAYVSGHDLVVDGGFTA 250
           ++++++G  L VDGG   
Sbjct: 231 DASFITGQTLAVDGGMVR 248

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  198 bits (505), Expect = 3e-63
 Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 20/263 (7%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADI--QDELGNQVVSSIGPE--KASYRHCD 63
            KVA++ G A GIG   ++  A  G  + +AD+  Q+E   + +  I     KA +   D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D+   +  +  A EK G  D++ +NAG+A  +  +L++      +  + N+      +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           + A+R      ++G II   S A+  G     AY+ +K  + GL ++AA EL   G  VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLK----AKHVAEAALFLASDE 233
             +P  V T        ++     K            I L      + VA    FLAS+ 
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240

Query: 234 SAYVSGHDLVVDGGFTAVTNVMS 256
           S YV+G  ++VDGG      + +
Sbjct: 241 SNYVTGQVMLVDGG-----MLYN 258

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  197 bits (504), Expect = 3e-63
 Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 17/260 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE---KASYRH 61
           L+GKVA++ G+ SGIG   A   A  GA +++    D     +V + +  +   K  Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+   + V   V  A+ + G +DI+ +NAG+      I D    ++D  +A NL+    
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
               A   M      G II   S    V  +   AY  +KHG++G  +  A E    GI 
Sbjct: 121 GTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 182 VNCVSPFGVATPFSAGTINDV-------EGFVCKVANLKGIVLK----AKHVAEAALFLA 230
            N + P  V TP     I+ +       +    +    +          + +   A+FLA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           SD +A ++G  + VDGG+TA
Sbjct: 240 SDAAAQITGTTVSVDGGWTA 259

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  197 bits (503), Expect = 4e-63
 Identities = 45/259 (17%), Positives = 86/259 (33%), Gaps = 27/259 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           + +     K  +++G +  +G    K F       I  D ++           P      
Sbjct: 15  VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN----------PNADHSF 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
                 E++++  +     K   +D     AG         D  +      I  NL  + 
Sbjct: 65  TIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAF 124

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KH 178
            +    A+++      G  + T ++A+    SG  AY  +K     +++  ASE G    
Sbjct: 125 ASAHIGAKLL---NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPA 181

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAAL-FLASDESAYV 237
           G     + P  + TP +   ++D        AN          VAE    +  + +S   
Sbjct: 182 GSTSLGILPVTLDTPTNRKYMSD--------ANFDDWT-PLSEVAEKLFEWSTNSDSRPT 232

Query: 238 SGHDLVVD--GGFTAVTNV 254
           +G  +  +     T  TN+
Sbjct: 233 NGSLVKFETKSKVTTWTNL 251

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  196 bits (500), Expect = 1e-62
 Identities = 74/257 (28%), Positives = 121/257 (47%), Gaps = 18/257 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KASYR 60
           P L+GK  +I G++ GIG ATA+LFA  GA V +         ++ ++S+  +   A++ 
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFF 62

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+   +  ++ V   + K+G +D++ +NAG       + ++D   +D  +  N+   V
Sbjct: 63  AADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 121 MAVKYAARVMVANKIR----GSIICTTSTASTVGGS-GPHAYTISKHGLLGLVRSAASEL 175
           M  K+A   + A         ++I T S A   GG  G   Y  +K  L  + ++     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLAS 231
            K G+R N VSP  V T F A    DV     +     GI +     A+ +A A LF AS
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQDV-----RDRISNGIPMGRFGTAEEMAPAFLFFAS 237

Query: 232 DE-SAYVSGHDLVVDGG 247
              S Y++G  L ++GG
Sbjct: 238 HLASGYITGQVLDINGG 254

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  195 bits (497), Expect = 3e-62
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 11/246 (4%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
            +A++  A    G A  +   + G  V+  D       +                   E+
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP----GTIALAEQ 57

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGT--ILDLDMAQFDRTIATNLAGSVMAVKYA 126
           + E  V   ++   ++D + SN  +  P+    +     A   +         ++ ++ A
Sbjct: 58  KPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSA 117

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
              + A     S+I  TS+      +    Y  ++   + LV SAA  L + GI +  + 
Sbjct: 118 IAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIG 176

Query: 187 PFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHDL 242
           P     P    T +       +    + + L    +   +     FLAS  +A + G   
Sbjct: 177 PNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFF 236

Query: 243 VVDGGF 248
              GG+
Sbjct: 237 AFTGGY 242

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  196 bits (500), Expect = 3e-62
 Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 12/252 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           + +G  AI+ G A G+GEAT +     G  V+IAD+  E G  +   +G  +A +   +V
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-NRAEFVSTNV 85

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI----LDLDMAQFDRTIATNLAGSV 120
             E  V   +  A +       + ++ G       +       DM  F +TI   L G+ 
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 121 MAVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
              +  A  + A +      RG+++ T S A   G  G  AY  +K G++GL  +AA +L
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL 205

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
              GIRVN ++P  + TP       +              +      A+AA FL ++   
Sbjct: 206 SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--G 263

Query: 236 YVSGHDLVVDGG 247
           Y++G  + +DG 
Sbjct: 264 YINGEVMRLDGA 275

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  194 bits (495), Expect = 8e-62
 Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           ++ KV II G +SG+G+  A  FA+ GA V+I     E   +    I     +      D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           VR+   +++ +    EK+G +DI+ +NA     +    DL +  ++  I   L G+    
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAG-NFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG-KHGIRV 182
           +   +  +   I+G+II   +T +   G G      +K G+L + ++ A E G K+GIRV
Sbjct: 123 QAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRV 182

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N ++P  +     A  +   E    +   ++ + L      + +A  A +L SDE+AY++
Sbjct: 183 NAIAPGPIERTGGADKLWISEEMAKRT--IQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN 240

Query: 239 GHDLVVDGGFT 249
           G  + +DGG  
Sbjct: 241 GTCMTMDGGQH 251

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  193 bits (494), Expect = 1e-61
 Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KA 57
           M+    L GK A++ G+A G+G A A+  A  GA VI+ DI+  L  + V ++  +   A
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATN 115
                DV DE  +E   +    +   +DI+ +NAG+    P   +++L++  + + I TN
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP---MVELELENWQKVIDTN 117

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L  + +  + AA+ M+A    G II   S  S         YT +K G+  L  S A+E 
Sbjct: 118 LTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEW 177

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLAS 231
            +  I+ N + P  + T  +   I D +                  + + +   A+FL+S
Sbjct: 178 AQFNIQTNAIGPGYILTDMNTALIEDKQF---DSWVKSSTPSQRWGRPEELIGTAIFLSS 234

Query: 232 DESAYVSGHDLVVDGGFTAV 251
             S Y++G  + VDGG+ AV
Sbjct: 235 KASDYINGQIIYVDGGWLAV 254

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  193 bits (494), Expect = 1e-61
 Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 16/260 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRH 61
            + GKVA+I G++SGIG A A+ FA+ GA +++   Q +  ++   S+      +     
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV   + V+  V      +G  DI+ +NAG  G   TI++    ++       +  +V 
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELLVMAAVR 122

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +     M A    G+II   S  +         Y ++K  L+   ++ A+E+ K  IR
Sbjct: 123 LARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGF-------VCKVANLKGIVLK----AKHVAEAALFLA 230
           VNC++P  + TP    T  ++            +    +   +K     + +A   +FL 
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC 241

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           S+ + Y  G    VDGG   
Sbjct: 242 SERATYSVGSAYFVDGGMLK 261

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  195 bits (497), Expect = 2e-61
 Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 11/259 (4%)

Query: 1   MSKP-RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---K 56
           M  P   QGKVA I G  +G+G+    L +  GA  +IA  + ++       I  +   K
Sbjct: 18  MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK 77

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                CDVRD   V+ TV+  I+  G  +I+ +NA     +     L    +       L
Sbjct: 78  VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG-NFISPTERLSPNAWKTITDIVL 136

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
            G+        + ++  +   + +  T+  +  G         +K G+  + +S A+E G
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG 196

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
           K+G+R N + P  + T  +   ++    F  ++  +  I        + +A  A FL SD
Sbjct: 197 KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM--IGRIPCGRLGTVEELANLAAFLCSD 254

Query: 233 ESAYVSGHDLVVDGGFTAV 251
            +++++G  +  DGG   +
Sbjct: 255 YASWINGAVIKFDGGEEVL 273

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  192 bits (490), Expect = 6e-61
 Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 13/253 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L+ K  ++ G   GIG A  + FA  GA +      +   N+ +S    +  + +   C
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 70

Query: 63  DVRDEKQVEETVAYAIEKYG-SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           D     + E+ +      +G  LDI+ +N G        LD     F   I+TNL  +  
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYH 129

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A  ++ A+   G+II  +S A  V  S    Y+ +K  L  L R+ A E    GIR
Sbjct: 130 LSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIR 188

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
            N V+P  +ATP +    +D      K   +    L      + V+    FL    ++Y+
Sbjct: 189 ANAVAPAVIATPLAEAVYDDEF----KKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 244

Query: 238 SGHDLVVDGGFTA 250
           +G  + VDGG T 
Sbjct: 245 TGQTICVDGGLTV 257

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  192 bits (490), Expect = 6e-61
 Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 20/260 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
               K  I+ G   GIG A  +  A  GA V +         +V   +G E   K     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV +   V +T+       G +  + +NAGV+  V    +L    F      N+ G   
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFN 129

Query: 122 AVKYAARVMVANKIRGSIICTTS-------TASTVGGSGPHAYTISKHGLLGLVRSAASE 174
             +  A++ +  + +GSI+ T+S        +S  G      Y  SK     LV+  A+E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLA 230
               GIRVN +SP  V T  +A     +     +      I L      + +   A+ L 
Sbjct: 190 WASAGIRVNALSPGYVNTDQTAHMDKKI-----RDHQASNIPLNRFAQPEEMTGQAILLL 244

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           SD + Y++G +  +DGG   
Sbjct: 245 SDHATYMTGGEYFIDGGQLI 264

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  189 bits (482), Expect = 9e-60
 Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 12/241 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L G+VA++ GA+ GIG A A+     GA V++     E    V   I     +A    C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+     +       +  +G  D++ +NAGV    G +  +  A++D  IA NL    + 
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           ++  A  M+A K RG II  +S A     +   AYT SK GL GL+ SAA EL +H +RV
Sbjct: 146 LRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           + V+P  V T F  G ++       K + L  I  +   +A+    LA+          L
Sbjct: 205 SLVAPGSVRTEFGVG-LSA------KKSALGAI--EPDDIADVVALLATQADQSFISEVL 255

Query: 243 V 243
           V
Sbjct: 256 V 256

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  188 bits (480), Expect = 1e-59
 Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 25/252 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           R Q KV +I GA+ GIG    + + +    V+      +                   D+
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-------PDIHTVAGDI 77

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
              +  +  V   IE++G +D + +NAGV       +++    +D  +  N+AG     +
Sbjct: 78  SKPETADRIVREGIERFGRIDSLVNNAGVFLA-KPFVEMTQEDYDHNLGVNVAGFFHITQ 136

Query: 125 YAARVMVANKIRGSIICTTSTASTVG--GSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            AA  M+     G I+  T++       G      +++K GL  + RS A E  + G+RV
Sbjct: 137 RAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRV 195

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVS 238
           N VSP  + TP      +                +    + + V +A L+L  + + +++
Sbjct: 196 NAVSPGVIKTPMHPAETHS--------TLAGLHPVGRMGEIRDVVDAVLYL--EHAGFIT 245

Query: 239 GHDLVVDGGFTA 250
           G  L VDGG  A
Sbjct: 246 GEILHVDGGQNA 257

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  188 bits (480), Expect = 2e-59
 Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 19/260 (7%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE--KASYRHC 62
            Q K A++ G++ G+G+A A   AE+G  ++I   +  +   +    I     K      
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           +V    +++E      E +G LD+  +NA        +++L+   +D T+  N    +  
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL-RPVMELEETHWDWTMNINAKALLFC 120

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            + AA++M  N   G I+  +S  S           +SK  L  L R  A EL    I V
Sbjct: 121 AQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N VS   + T       N  +         +          K + +   FL S ++  + 
Sbjct: 180 NAVSGGAIDTDALKHFPNRED---LLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIR 236

Query: 239 GHDLVVDGGFTAVTNVMSML 258
           G  ++VDGG        S+L
Sbjct: 237 GQTIIVDGG-------RSLL 249

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  187 bits (478), Expect = 2e-59
 Identities = 51/250 (20%), Positives = 84/250 (33%), Gaps = 12/250 (4%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
             AI+       G  +A   +E G  V   D   +  +++ +       +Y       E+
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA----FAETYPQLKPMSEQ 57

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
           +  E +      YG +D++ SN   A     I    +  +   +          V   A 
Sbjct: 58  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 117

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF 188
            M   K  G II  TS            YT ++ G   L  + + ELG++ I V  + P 
Sbjct: 118 QMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 176

Query: 189 GVATPFSAGTINDVEGFVC---KVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
            + +  S                    K   L+     K + E   FLAS    Y++G  
Sbjct: 177 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQV 236

Query: 242 LVVDGGFTAV 251
             + GGF  +
Sbjct: 237 FWLAGGFPMI 246

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  187 bits (477), Expect = 3e-59
 Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 10/246 (4%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
           MS    +     ++GA   IG   AK FA  G  V       E    +V+ I     +  
Sbjct: 1   MSL-TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIV 59

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
            R  D R+E +V   +  A + +  L++   N G       IL+     F +        
Sbjct: 60  ARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGA-NVNFPILETTDRVFRKVWEMACWA 117

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
             ++ + +AR+M+A+  +G I  T +TAS  GGSG  A+  +K GL  + +S A EL   
Sbjct: 118 GFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPK 176

Query: 179 GIRV-NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS-DESAY 236
            I V + +   GV T +       + G          +++    VA A   L    +SA+
Sbjct: 177 NIHVAHLIIDSGVDTAWVRERREQMFGK--DALANPDLLMPPAAVAGAYWQLYQQPKSAW 234

Query: 237 VSGHDL 242
               ++
Sbjct: 235 TFEMEI 240

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  184 bits (470), Expect = 4e-58
 Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADI--QDELGNQVVSSIGPEKASYRHCDVR 65
           GKV ++ G + GIG++   +        ++  +   +    ++    G ++  Y   D+ 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-DRFFYVVGDIT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           ++  +++ V  A++ +G +D + +NAGV  PV  + ++D+  + +    N    V  V  
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A   +      G+++  +S A  +  S   AY  SK  L     + A+E  +  ++   V
Sbjct: 121 ALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAV 176

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLK--------GIVLKAKHVAEAALFLASDESA-Y 236
           +P  V T        +V         LK          +L +   A     LA       
Sbjct: 177 APGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDG 236

Query: 237 VSGHDLVVDGGFTA 250
           V+G  L  +    A
Sbjct: 237 VNGQYLSYNDPALA 250

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  185 bits (471), Expect = 5e-58
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHC 62
           L+ KVA I G  SGIG   A++F  HG   +IA             +      +      
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DVR    V   V  A++++G +DI+ + A     +     L    F   +  + +G+   
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAA-GNFLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +        +   G I+  T+T    G +       +K  +  + R  A E G   IRV
Sbjct: 144 SRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N ++P  ++       +   +  +     +    L+       +A + L+LAS  ++YV+
Sbjct: 203 NSLAPGPISGTEGLRRLGGPQASLSTK--VTASPLQRLGNKTEIAHSVLYLASPLASYVT 260

Query: 239 GHDLVVDGG 247
           G  LV DGG
Sbjct: 261 GAVLVADGG 269

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  185 bits (472), Expect = 6e-58
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 20/254 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--DIQDELGNQVVSSIGPEKASYR-- 60
           RL+ + A++ G  SGIG A A  +A  GA V I     ++E   QV + I  E+   +  
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI--EECGRKAV 103

Query: 61  --HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               D+ DE      V  A E  G LDI+   AG    +  I DL   QF +T A N+  
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
                + A  ++       SII T+S  +         Y  +K  +L   R  A ++ + 
Sbjct: 164 LFWITQEAIPLLPKG---ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL-KGIVLK----AKHVAEAALFLASDE 233
           GIRVN V+P  + T          +    K+    +   +K       +A   ++LAS E
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQD----KIPQFGQQTPMKRAGQPAELAPVYVYLASQE 276

Query: 234 SAYVSGHDLVVDGG 247
           S+YV+     V GG
Sbjct: 277 SSYVTAEVHGVCGG 290

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  183 bits (468), Expect = 9e-58
 Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 27/271 (9%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KA 57
           MS  R   +  ++ GA   IG A A  FA+ GA V++       G    V+ I      A
Sbjct: 1   MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D+ +  +VE  ++ A +K+G +  +   AG      TI ++D A + + +  NL 
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISKHGLLGLVRSAASELG 176
              +  K A   M      G+I+  +S A   GG  G  AY  SK  ++   R  A E+G
Sbjct: 121 SLFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177

Query: 177 KHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLK----AKHVAEAALFLA 230
              IRVN V P  ++T F          E             LK    ++ VA    FLA
Sbjct: 178 P-KIRVNAVCPGMISTTFHDTFTKPEVRERV------AGATSLKREGSSEDVAGLVAFLA 230

Query: 231 SDESAYVSGHDLVVDGGFTAVTNVMSMLEGH 261
           SD++AYV+G    ++GG       +   EGH
Sbjct: 231 SDDAAYVTGACYDINGG-------VLFSEGH 254

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  184 bits (469), Expect = 1e-57
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 17/254 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            L G+ A++ GA SGIG A A  +A  GA V+     D +  +V   I      A     
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVA 86

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSV 120
           D+ D +         +     +D++ +NAG+    P     ++ + ++   +  NL  + 
Sbjct: 87  DLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAP---AEEVSLGRWREVLTVNLDAAW 142

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +  +     M+A+   G I+   S  S  GG    AY  SKH ++GL R+ ASE    G+
Sbjct: 143 VLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAY 236
            VN ++P  V T  +A    D E           I        + +   A+FLASD ++Y
Sbjct: 202 GVNALAPGYVVTANTAALRADDER---AAEITARIPAGRWATPEDMVGPAVFLASDAASY 258

Query: 237 VSGHDLVVDGGFTA 250
           V G  L VDGG+ A
Sbjct: 259 VHGQVLAVDGGWLA 272

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  183 bits (467), Expect = 2e-57
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 20/262 (7%)

Query: 1   MSKPRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE-- 55
           + +  L+GKV ++ GA    G+G   A+  AE GA V I    + +   + V  +     
Sbjct: 13  LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG 72

Query: 56  -KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
            KA    C V   +  E+ V   +  +G +D   +NAG       ILD  +  ++  +  
Sbjct: 73  IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD-SGILDGSVEAWNHVVQV 131

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAA 172
           +L G+    K            GS++ T S +  +        +Y ++K G + + RS A
Sbjct: 132 DLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALF 228
           +E      RVN +SP  + T  S     + +           I +     AK +  A ++
Sbjct: 191 NEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLW-----HSMIPMGRDGLAKELKGAYVY 244

Query: 229 LASDESAYVSGHDLVVDGGFTA 250
            ASD S Y +G DL++DGG+T 
Sbjct: 245 FASDASTYTTGADLLIDGGYTT 266

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  183 bits (466), Expect = 3e-57
 Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 30/262 (11%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-------NQVVSSIGPE-- 55
            L GK   I GA+ GIG A A   A  GA V IA              +   +++     
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +     CD+R+E QV   VA  ++ +G +DI+ +NA     +   LD  M +FD     N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVN 121

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAAS 173
             GS +  +     ++       I+      S           YT++K G+  +    A+
Sbjct: 122 ARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFL 229
           E G  G+ +N + P          T+   +     +  L G+      + + +A+AA  +
Sbjct: 181 EFGPQGVAINALWP---------RTVIATDA----INMLPGVDAAACRRPEIMADAAHAV 227

Query: 230 ASDESAYVSGHDLVVDGGFTAV 251
            + E+A   G  L+ D      
Sbjct: 228 LTREAAGFHGQFLIDDEVLAQA 249

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  181 bits (462), Expect = 4e-57
 Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 15/244 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           +     I+ GA SG+G A      E G  V +   + +   Q    +G         D+ 
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLA 59

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
             + V+   A A+E  G  +++   AG  G  G +      Q  R + +NL  +++  + 
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLHCAGT-GEFGPVGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R++      G +    S+A+ VG +    Y  SK G+ G + S  +EL    +R+  +
Sbjct: 119 TVRLIGER--GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNL 176

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF-LASDESAYVSGHDLVV 244
            P G+ + F   T +                +  +  A   L  L +  S +V+   +  
Sbjct: 177 YPSGIRSEFWDNTDHVDPSG----------FMTPEDAAAYMLDALEARSSCHVTDLFIGR 226

Query: 245 DGGF 248
           + G 
Sbjct: 227 NEGH 230

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  182 bits (464), Expect = 4e-57
 Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 17/256 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
            L+G+VA++ G + G+G   A+  AE G  V++A    E  ++    +  +   +     
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGS 119
           CDV + ++V++ +    EK+G LD + + AG+    P     +  + +F + I  NL G+
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP---AEEFPLDEFRQVIEVNLFGT 134

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGG-SGPHAYTISKHGLLGLVRSAASELGKH 178
               + A  ++  +    SII   S            AY  SK G+  L ++ A E G++
Sbjct: 135 YYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY 193

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDES 234
           GIRVN ++P    T  +    +D E        LK I L      + +   A+FLAS+E+
Sbjct: 194 GIRVNVIAPGWYRTKMTEAVFSDPEK---LDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 250

Query: 235 AYVSGHDLVVDGGFTA 250
            YV+G  + VDGG+TA
Sbjct: 251 KYVTGQIIFVDGGWTA 266

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  181 bits (463), Expect = 5e-57
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 22/263 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRH 61
            LQG+  ++ G   GIG   A +FA  GA V +A       +  V+ +   G  K     
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D  Q +     A+E++G +D++ +NAGV  P   +  +   Q +   A N+ G+  
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 122 AVKYAARVMVANKIRGSIICTTS-TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           AV+     ++A+   G ++ T+S T    G  G   Y  +K   LG +R+AA EL  H I
Sbjct: 126 AVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
            VN + P  + T        +        +  + I        + +   A FLA+ E+ Y
Sbjct: 185 TVNAIMPGNIMTEGLLENGEEY-----IASMARSIPAGALGTPEDIGHLAAFLATKEAGY 239

Query: 237 VSGHDLVVDGGFTAVTNVMSMLE 259
           ++G  + VDGG         + E
Sbjct: 240 ITGQAIAVDGG-------QVLPE 255

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  181 bits (461), Expect = 8e-57
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 8/248 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK A++ GAA GIG+A A   A  GA VI++DI  E      +SIG +KA     D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAADI 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   V+   A      G +DI+ +NA +        D+D+  + + I  NL G+ +  +
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIVPF-VAWDDVDLDHWRKIIDVNLTGTFIVTR 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M A    G +I   S     G     AY  +K G++G  R+ A+ELGK+ I  N 
Sbjct: 121 AGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANA 180

Query: 185 VSPFGVATPFSAGTINDV-EGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVSGHD 241
           V+P  + +     + ++   GFV  +  +K  G   + +H+A+   FLASD++ +++G  
Sbjct: 181 VTPGLIESDGVKASPHNEAFGFVEMLQAMKGKG---QPEHIADVVSFLASDDARWITGQT 237

Query: 242 LVVDGGFT 249
           L VD G  
Sbjct: 238 LNVDAGMV 245

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  182 bits (464), Expect = 1e-56
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 15/266 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-------KA 57
            LQG+VAI+ G A+GIG+A  K   E G+ V+IA  + E        +          + 
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C++R+E++V   V   ++ +G ++ + +N G          +    +   + TNL 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL-SPAEHISSKGWHAVLETNLT 133

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+    K      +     GSI+      +  G         ++ G+  L +S A E   
Sbjct: 134 GTFYMCKAVYSSWMKEH-GGSIV-NIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWAC 191

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            GIR+NCV+P  + +  +A       G      + + I  K     + V+    FL S  
Sbjct: 192 SGIRINCVAPGVIYSQ-TAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250

Query: 234 SAYVSGHDLVVDGGFTAVTNVMSMLE 259
           +++++G  + VDGG +  T+   + +
Sbjct: 251 ASFITGQSVDVDGGRSLYTHSYEVPD 276

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  180 bits (460), Expect = 2e-56
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 14/255 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRH 61
           +    VAI+ G   GIG   A+  A  G  + I  I D  G   V++ +     +  +  
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSV 120
            D+ D    + TV   + ++G +D + +NAG+A  V    LDL    FD  +  NL G+V
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTV 145

Query: 121 MAVKYAARVMVANKIR--GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
              +   + M+A+  R   SII  TS ++ +       Y +SK GL    +  A  L + 
Sbjct: 146 FFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAET 205

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDES 234
           GI V  V P  + +  +A      +     +     + ++     + +      LA  + 
Sbjct: 206 GIAVFEVRPGIIRSDMTAAVSGKYD----GLIESGLVPMRRWGEPEDIGNIVAGLAGGQF 261

Query: 235 AYVSGHDLVVDGGFT 249
            + +G  +  DGG +
Sbjct: 262 GFATGSVIQADGGLS 276

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  180 bits (458), Expect = 3e-56
 Identities = 58/250 (23%), Positives = 89/250 (35%), Gaps = 9/250 (3%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR----HCDV 64
            V  I G+ASGIG A  +L A  G  VI  D         +S+ G  + +       C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAV 123
             +  V             L +  +  GV+  + G    L   Q    +      +    
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
                ++ A    G        A    G    AY  SK+ +  L R    +    G+R+N
Sbjct: 122 AAELPMVEAML-AGDEARAIELAE-QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLN 179

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVSGHD 241
            V+P  V TP    +  D          +   G   + + VAEA  FL   +++++ G  
Sbjct: 180 VVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSV 239

Query: 242 LVVDGGFTAV 251
           L VDGG  A+
Sbjct: 240 LFVDGGMDAL 249

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  181 bits (461), Expect = 3e-56
 Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 22/254 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASYR--- 60
           +L+GK  +I G  SGIG A +  FA+ GA + IA + ++   N+    +  EK   +   
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV--EKEGVKCVL 101

Query: 61  -HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ DE+  ++ V   + + GSL+I+ +N     P   +  +   Q ++T   N+   
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               K A   +   K    II T S  +  G      Y+ +K  ++   RS +  L + G
Sbjct: 162 FHVTKAALSHL---KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218

Query: 180 IRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
           IRVN V+P  + TP    + ++  V  F         + ++       +A A ++LAS +
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKKVSQF------GSNVPMQRPGQPYELAPAYVYLASSD 272

Query: 234 SAYVSGHDLVVDGG 247
           S+YV+G  + V+GG
Sbjct: 273 SSYVTGQMIHVNGG 286

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  180 bits (459), Expect = 6e-56
 Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 12/247 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
              G+ A++ G ASGIG ATA  FA  GA ++++D+      Q V+ +  +   A    C
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DVR   ++      A    G +D+++SNAG+    G +  ++   +   I  +L GS+ A
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWGSIHA 146

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           V+     ++     G I  T S A  V  +G   Y ++K+G++GL  + A E+  +GI V
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206

Query: 183 NCVSPFGVATPFSAGT---------INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           + + P  V T   + +         ++            +   + A  VA          
Sbjct: 207 SVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266

Query: 234 SAYVSGH 240
             Y+  H
Sbjct: 267 RLYILPH 273

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  177 bits (452), Expect = 2e-55
 Identities = 47/254 (18%), Positives = 80/254 (31%), Gaps = 21/254 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI--GPEKASYRH 61
            L  K  I + A  GIG  T++   +      +I D  +                 ++  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 62  CDV-RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            DV     + ++ +    ++  ++DI+ + AG+         LD  Q +RTIA N  G V
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAINFTGLV 112

Query: 121 MAVKYAARVMVANKI--RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
                        K    G I    S            Y+ SK  ++    S A      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN--LKGIVLKAKHVAEAALFLASDESAY 236
           G+    ++P    TP    T N       +VA   L      ++   +  +         
Sbjct: 173 GVTAYSINPGITRTPLVH-TFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK-- 229

Query: 237 VSGHDLVVDGGFTA 250
            +G    +D G   
Sbjct: 230 -NGAIWKLDLGTLE 242

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  177 bits (451), Expect = 1e-54
 Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 22/263 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRH 61
            L  +  ++ G   GIG   A +FA  GA V +A       + V + +   G        
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D     +     ++ +G+LD++ +NAG+  P   +  +   Q    +  N+ G+V 
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVY 156

Query: 122 AVKYAARVMVANKIRGSIICTTS-TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            V+     + A+  RG +I T+S T    G  G   Y  SK   LG +R+AA EL   G+
Sbjct: 157 TVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
            VN + P  + T        +           + I +        +   A FLA+DE+ Y
Sbjct: 216 TVNAILPGNILTEGLVDMGEEY-----ISGMARSIPMGMLGSPVDIGHLAAFLATDEAGY 270

Query: 237 VSGHDLVVDGGFTAVTNVMSMLE 259
           ++G  +VVDGG         + E
Sbjct: 271 ITGQAIVVDGG-------QVLPE 286

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  174 bits (444), Expect = 2e-54
 Identities = 56/244 (22%), Positives = 93/244 (38%), Gaps = 21/244 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDELGNQVVSSIGPE--KASY 59
            + +I GA  GIG A A  FA            ++++        ++      E      
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ D   V     + +E+YG +D + +NAGV    G + DL    FD T+ TNL G+
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGT 121

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               +    +M      G I   TS A+T        Y +SK G  GLV +      K  
Sbjct: 122 FFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           +R+  V P  V TP      +++          + +++  + +A   +      S  V  
Sbjct: 181 VRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 240 HDLV 243
             ++
Sbjct: 231 EIIL 234

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  175 bits (447), Expect = 2e-54
 Identities = 60/256 (23%), Positives = 96/256 (37%), Gaps = 20/256 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-------NQVVSSIGPE-- 55
            L+GK   I G + GIG A AK  A  GA V +     E               I     
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +A     D+RD   V   VA  +E++G +DI  +NA     +G+I ++ + +FD      
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQ 124

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTST-ASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           + G+    +     M        I+  +           P  Y ++K+G+       A E
Sbjct: 125 VRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEE 183

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           L   GI  N + P    T  +A   N + G             K +  A+AA  + +  S
Sbjct: 184 LRDAGIASNTLWP--RTTVATAAVQNLLGGDE-----AMARSRKPEVYADAAYVVLNKPS 236

Query: 235 AYVSGHDLVVDGGFTA 250
           +Y  G+ L+ +     
Sbjct: 237 SYT-GNTLLCEDVLLE 251

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  174 bits (444), Expect = 3e-54
 Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 11/251 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L+ +V I+ GA+SG+G A  ++ A+ GA V+  D++   G +  + +G     +R+ DV
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG-AAVRFRNADV 62

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI---LDLDMAQFDRTIATNLAGSVM 121
            +E      +A+A +++G +  + + AG A     +       +  F RT+A NL G+  
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122

Query: 122 AVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
            ++ AA VM   +      RG I+ T S A+  G  G  AY  SK G+  L   AA EL 
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA 182

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY 236
           + GIRV  ++P    TP  AG   DV+  +         + +A+  A     +   E+  
Sbjct: 183 RFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHIC--ENTM 240

Query: 237 VSGHDLVVDGG 247
           ++G  + +DG 
Sbjct: 241 LNGEVIRLDGA 251

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  173 bits (440), Expect = 1e-53
 Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 18/248 (7%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           + A++ G + GIG A A+     G  V IA    E   Q +       A     D+ ++ 
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL------GAVPLPTDL-EKD 55

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
             +  V  A+E  G L ++   A V       L+L   ++ R +  +L  + +  + AA 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114

Query: 129 VMVANKIRGSIICTTSTASTVGGSGPH--AYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            M      G ++   S  +   G      AYT +K  LLGL R+ A E  + GIRVN + 
Sbjct: 115 HMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 187 PFGVATPFSAGTINDVEGFVCKVANLKGIVL----KAKHVAEAALFLASDESAYVSGHDL 242
           P  V T F+     + E           I +    + + +A  A  L  DE+ Y++G  +
Sbjct: 174 PGYVETEFTLPLRQNPEL---YEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAV 230

Query: 243 VVDGGFTA 250
            VDGGF A
Sbjct: 231 AVDGGFLA 238

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  173 bits (440), Expect = 2e-53
 Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 21/257 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            ++G VA+I G ASG+G ATA+     GA  ++ D+ +  G      +G     +   DV
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADV 67

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-----LDMAQFDRTIATNLAGS 119
             EK V+  +A A  K+G +D+  + AG+A    T          +  F R +  NL G+
Sbjct: 68  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 127

Query: 120 VMAVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
              ++  A  M  N+      RG II T S A+  G  G  AY+ SK G++G+    A +
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 187

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE----AALFLA 230
           L   GIRV  ++P    TP        V         L   V     + +    A L  A
Sbjct: 188 LAPIGIRVMTIAPGLFGTPLLTSLPEKVC------NFLASQVPFPSRLGDPAEYAHLVQA 241

Query: 231 SDESAYVSGHDLVVDGG 247
             E+ +++G  + +DG 
Sbjct: 242 IIENPFLNGEVIRLDGA 258

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  171 bits (436), Expect = 4e-53
 Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 19/245 (7%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPE 55
           MS    Q  +AII GA+ GIG   A   A  G  V++     +   +V   I       +
Sbjct: 1   MSL-EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQ 59

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +      D+ D  + +  +    +KYG++DI+ + A +   +   L   +  F + +  N
Sbjct: 60  EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMF--MDGSLSEPVDNFRKIMEIN 117

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           +      +K    +M   K  G I    S A+  G +    Y  +K  LLGL  S   EL
Sbjct: 118 VIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYREL 176

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD-ES 234
              GIRV  + P  V T  +       +            +++   +      L +  E+
Sbjct: 177 APLGIRVTTLCPGWVNTDMAKKAGTPFKDE---------EMIQPDDLLNTIRCLLNLSEN 227

Query: 235 AYVSG 239
             +  
Sbjct: 228 VCIKD 232

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  171 bits (437), Expect = 5e-53
 Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 16/253 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRHC 62
               V ++ G + GIG A  +L A  G  V +    +    + VV++I     +A     
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV +   +    +    ++G LD + +NAG+      + ++ + + +R +  N+ GS++ 
Sbjct: 84  DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143

Query: 123 VKYAARVMVANKIR--GSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHG 179
              A R M        G+I+  +S A+ +G +  +  Y  SK  +       A E+   G
Sbjct: 144 AAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG 203

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDES 234
           IRVN V P  + T      ++   G   +   +   V        + VA+A L+L S  +
Sbjct: 204 IRVNAVRPGIIETD-----LHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSA 258

Query: 235 AYVSGHDLVVDGG 247
           +YV+G  L V GG
Sbjct: 259 SYVTGSILNVSGG 271

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  170 bits (434), Expect = 6e-53
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 25/257 (9%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPEKASY 59
           M+    + +  ++ G    +G    + F     +V   D+ ++E  +  V     +    
Sbjct: 1   MAA-SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---- 55

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
                 ++          +     +D +   AG                D     ++  S
Sbjct: 56  ---SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--K 177
            ++   A + +   K  G +    + A+  G  G   Y ++K  +  L +S A +     
Sbjct: 113 TISSHLATKHL---KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMP 169

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
            G     V P  + TP +  ++ +        A+        + + E      +      
Sbjct: 170 SGAAAIAVLPVTLDTPMNRKSMPE--------ADFSSWT-PLEFLVETFHDWITGNKRPN 220

Query: 238 SGHDLVV--DGGFTAVT 252
           SG  + V    G T +T
Sbjct: 221 SGSLIQVVTTDGKTELT 237

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  171 bits (435), Expect = 8e-53
 Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 20/256 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII---ADIQDELGNQVVSSIGPE--KASY 59
            L+ KV +I G    +G  TAK FA     +++        +  N++   +  +  K + 
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ +E++V +   +A +++G +DI  +  G       I++   A+FD     N   +
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK-KPIVETSEAEFDAMDTINNKVA 126

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
              +K AA+ M  N   G II   ++           Y  +K  +    R+A+ EL K  
Sbjct: 127 YFFIKQAAKHMNPN---GHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-----KAKHVAEAALFLASDES 234
           I VN ++P  + T F  G            A  K   +     K + +A    FL +D  
Sbjct: 184 ISVNAIAPGPMDTSFFYGQETKE-----STAFHKSQAMGNQLTKIEDIAPIIKFLTTD-G 237

Query: 235 AYVSGHDLVVDGGFTA 250
            +++G  +  +GG+T 
Sbjct: 238 WWINGQTIFANGGYTT 253

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  170 bits (433), Expect = 1e-52
 Identities = 56/274 (20%), Positives = 98/274 (35%), Gaps = 55/274 (20%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
            + +I G A+GIG AT K+    G  ++  DI+D    +V+             D+   +
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---EVI------------ADLSTAE 46

Query: 69  QVEETVAYAIEK-YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
             ++ +A  + K    +D +   AG+                  ++ N  G+   +    
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFL 98

Query: 128 RVMVANKIRGSIICTTSTAST----------------------------VGGSGPHAYTI 159
             +     + + +  +S AS                                 G  AY  
Sbjct: 99  PALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157

Query: 160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK--GIVL 217
           SK+ L   VR  A+  G+ G+R+N ++P    TP     + D          +   G   
Sbjct: 158 SKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

Query: 218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
           +   +A    FL S  ++YV G  +V+DGG  AV
Sbjct: 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  170 bits (434), Expect = 1e-52
 Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 21/261 (8%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG------- 53
           M   RL+  +A++ GA SGIG A +   A  GA V   D+      + V  +G       
Sbjct: 1   MQN-RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEG 59

Query: 54  --PEKASYRHCDVRDEKQVEETVAYAIEKYGS-LDIMYSNAGVAGPVGTILDLDMAQFDR 110
                 +    DV + +     +      +     ++ S AG+      +L +    +D+
Sbjct: 60  PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQD-EFLLHMSEDDWDK 118

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            IA NL G+ +  + AA+ +V+N  RGSII  +S    VG  G   Y  SK G++GL ++
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178

Query: 171 AASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAA 226
           AA ELG+HGIR N V P  +ATP +      V          + I +      + VA+  
Sbjct: 179 AARELGRHGIRCNSVLPGFIATPMTQKVPQKV-----VDKITEMIPMGHLGDPEDVADVV 233

Query: 227 LFLASDESAYVSGHDLVVDGG 247
            FLAS++S Y++G  + V GG
Sbjct: 234 AFLASEDSGYITGTSVEVTGG 254

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  168 bits (429), Expect = 3e-52
 Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 16/227 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
                  +I GA+ GIGEATA+L    G  V +    ++    + + +    A     DV
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           R+E      VA   E +G L  + +NAGV   +  + +L + ++   + TNL G+ + ++
Sbjct: 60  REEGDWARAVAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIR 118

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           +A   ++     G+I+   S A      G  AY  SK GLLGL  +A  +L +  +RV  
Sbjct: 119 HAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVN 177

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           V P  V T F+  T                  LK + VA+A LF   
Sbjct: 178 VLPGSVDTGFAGNTPGQAWK------------LKPEDVAQAVLFALE 212

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  169 bits (430), Expect = 7e-52
 Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 18/258 (6%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KA 57
           M+   L GK A + G + GIG A AK  A  GA V +  +        VVS I     +A
Sbjct: 24  MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRA 83

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D RD + +E+ +   +E  G LDI+ ++AG+      + +  +A FD  +A N  
Sbjct: 84  VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFR 142

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTST-ASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
              +A++ A+R +      G II   S  A  V   G   Y+ SK  L GL +  A +LG
Sbjct: 143 APFVAIRSASRHLGDG---GRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG 199

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
             GI VN V P    T  +    +  E         + I        + +A    +LA  
Sbjct: 200 PRGITVNIVHPGSTDTDMNPADGDHAEAQ------RERIATGSYGEPQDIAGLVAWLAGP 253

Query: 233 ESAYVSGHDLVVDGGFTA 250
           +  +V+G  L +DGG  A
Sbjct: 254 QGKFVTGASLTIDGGANA 271

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  168 bits (427), Expect = 8e-52
 Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 15/247 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+ K  +I GAA GIG AT +LFA+ GA ++  DI++    +   ++G   A     DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG---AHPVVMDV 58

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   VE   A A+   G LD +   AG+         + +  ++  +  NL GS +  K
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGITRD-NFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A+  M      GSI+ T S    +G  G   Y  S  G++GL R+ A ELG+ GIRVN 
Sbjct: 118 AASEAMREKN-PGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           ++P  + T  +A     V     +   +    L        VA AALFL SDES++++G 
Sbjct: 176 LAPGFIETRMTAKVPEKV-----REKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQ 230

Query: 241 DLVVDGG 247
            L VDGG
Sbjct: 231 VLFVDGG 237

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  168 bits (429), Expect = 1e-51
 Identities = 70/257 (27%), Positives = 106/257 (41%), Gaps = 16/257 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
               +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DVR   ++E  VA  +E+YG +D++ +NAG  G  G   +L    +   + TNL G    
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 137

Query: 123 VKYAARV--MVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            K   +   M+     G I+   ST    G      Y+ SKHG++G  ++   EL + GI
Sbjct: 138 TKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVC------KVANLKGIVLK----AKHVAEAALFLA 230
            VN V P  V TP +A                        + +        VAE   +L 
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI 256

Query: 231 SDESAYVSGHDLVVDGG 247
              +A V+   L V GG
Sbjct: 257 GPGAAAVTAQALNVCGG 273

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  168 bits (429), Expect = 1e-51
 Identities = 72/256 (28%), Positives = 102/256 (39%), Gaps = 16/256 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
            + + A + G +SGIG A A+  A  G  V       +  +  V  +           CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V    +V   VA A+E++G + I+ ++AG  G  G   DLD A +   + TNL G     
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVT 140

Query: 124 KYAARV--MVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
           +   R   M      G I+   ST    G      YT SKHG++G  +S   EL K GI 
Sbjct: 141 REVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVC------KVANLKGIVLK----AKHVAEAALFLAS 231
           VN V P  V TP +                         I L      + VA    +L +
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT 259

Query: 232 DESAYVSGHDLVVDGG 247
           D +A ++   L V GG
Sbjct: 260 DAAASITAQALNVCGG 275

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  168 bits (428), Expect = 4e-51
 Identities = 51/260 (19%), Positives = 95/260 (36%), Gaps = 21/260 (8%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEK 56
           MS     G+ A + G A+G+G    +     G  V IADI+ +  ++ ++++       +
Sbjct: 1   MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE 60

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                 DV   +  +        ++G + I+ +NAGV      I +     +D  +  NL
Sbjct: 61  VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVNL 119

Query: 117 AGSVMAVKYAARVMVANKIR-----GSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSA 171
            G V  V      MV          G ++ T S A+ +    P  Y  +K  + GL  S 
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179

Query: 172 ASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF-----------VCKVANLKGIVLKAK 220
              L K+ I V+ + P  V +   A      +             V ++A +    ++  
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD 239

Query: 221 HVAEAALFLASDESAYVSGH 240
            +    +        ++  H
Sbjct: 240 VIGARVIEAMKANRLHIFSH 259

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  167 bits (425), Expect = 5e-51
 Identities = 64/286 (22%), Positives = 103/286 (36%), Gaps = 41/286 (14%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSI---GPEKA 57
               ++   A++ GAA  IG A A    + G  V+I      E    +   +       A
Sbjct: 17  RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTA 76

Query: 58  SYRHCDVRDEK----QVEETVAYAIEKYGSLDIMYSNAGV--AGPVGTILDLDM------ 105
                D+ +        EE +      +G  D++ +NA      P+      D       
Sbjct: 77  VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTV 136

Query: 106 -AQFDRTIATNLAGSVMAVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTI 159
             Q    I TN     +     A+              SI+                Y +
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNM 196

Query: 160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-- 217
            KH L+GL +SAA EL  +GIRVN V+P     P     + + E    K    + + L  
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP---VAMGEEE----KDKWRRKVPLGR 249

Query: 218 ---KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLEG 260
               A+ +A+A +FL S  + Y++G  + VDGG       +S++  
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGG-------LSLVHA 288

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  167 bits (424), Expect = 7e-51
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 20/262 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPE--KASYR 60
             L+GKVA++ GA  GIG   A      G  VI+      E   +VV++I      A+  
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 84

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             +V   + +      A++ +G LDI+ SN+GV    G + D+   +FDR    N  G  
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQF 143

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHG 179
              + A + +      G +I   S          HA Y+ SK  +    R  A ++    
Sbjct: 144 FVAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 200

Query: 180 IRVNCVSPFGVAT--------PFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAAL 227
           I VN V+P G+ T         +     N     V + A ++   L+       +A    
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260

Query: 228 FLASDESAYVSGHDLVVDGGFT 249
           FLAS++  +V+G  + +DGG  
Sbjct: 261 FLASNDGGWVTGKVIGIDGGAC 282

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  165 bits (421), Expect = 1e-50
 Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 15/250 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRHC 62
              KVAI+ GA+ GIG A A   A  G  V+I          +V   I     KA     
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D   V    A A E +G +D++ +NAG+  P+ TI +   A FDR IA NL G+   
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGI-MPLTTIAETGDAVFDRVIAVNLKGTFNT 143

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           ++ AA+ +      G II  +++   +       Y  +K G+  +    + EL    I V
Sbjct: 144 LREAAQRLRVG---GRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITV 200

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N V+P   AT       +D      +    K   L+     + +A A  FLA  + A+V+
Sbjct: 201 NAVAPGPTATDLFLEGKSDEV----RDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVN 256

Query: 239 GHDLVVDGGF 248
           G  L  +GG 
Sbjct: 257 GQVLRANGGI 266

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  165 bits (419), Expect = 3e-50
 Identities = 63/270 (23%), Positives = 101/270 (37%), Gaps = 24/270 (8%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSI---GPEKA 57
           S    +   A+I G A  IG + A    + G  V++     E    ++V+ +       A
Sbjct: 5   SHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSA 64

Query: 58  SYRHCDVRDEKQV----EETVAYAIEKYGSLDIMYSNAGV----------AGPVGTILDL 103
                D+     +    E+ +  +   +G  D++ +NA                      
Sbjct: 65  VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKP 124

Query: 104 DMAQFDRTIATNLAGSVMAVKYAARVMVAN----KIRGSIICTTSTASTVGGSGPHAYTI 159
             AQ      +N    +  ++  AR             S++      + +   G   YT+
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM 184

Query: 160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKA 219
           +KH L GL R+AA EL    IRVN V+P     P  A      E +  KV  L      A
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVP-LGQSEASA 242

Query: 220 KHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             +A+A  FL S ++ Y++G  L VDGG  
Sbjct: 243 AQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  164 bits (418), Expect = 3e-50
 Identities = 50/249 (20%), Positives = 91/249 (36%), Gaps = 20/249 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L     +I GA+  +G   A    EHG  VII+   +      V+ +    A   + D 
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQAGAVALYGDF 80

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E  +   +     +  SL  +  NA            +   F R  + ++    +   
Sbjct: 81  SCETGIMAFIDLLKTQTSSLRAVVHNASEWLA--ETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
           +   ++ A++    I+  +   +  G S   AY  +K GL  L  S A+      ++VN 
Sbjct: 139 HCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPL-VKVNG 196

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGH 240
           ++P  +          D   +  +   L    L     A+ + ++  +L    S YV+G 
Sbjct: 197 IAPALLMFQ-----PKDDAAY--RANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGT 247

Query: 241 DLVVDGGFT 249
            L V+GG  
Sbjct: 248 TLTVNGGRH 256

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  164 bits (417), Expect = 7e-50
 Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 17/256 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRHCD 63
            L G++A++ G + GIG+  A+   E GA V I     E      + +           D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVA--GPVGTILDLDMAQFDRTIATNLAGSVM 121
           +  E           E    LDI+ +NAG +       +    ++ +++ +  N+     
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAA---LESYPVSGWEKVMQLNVTSVFS 142

Query: 122 AVKYAARVMVANKI---RGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGK 177
            ++    ++  +        +I   S A         +AY  SK  L  L R  A EL  
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
             I VN ++P    +  +    ND +      A+   I +      + +A  A+ LA   
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQA---LEADSASIPMGRWGRPEEMAALAISLAGTA 259

Query: 234 SAYVSGHDLVVDGGFT 249
            AY++G+ + +DGGF 
Sbjct: 260 GAYMTGNVIPIDGGFH 275

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  162 bits (412), Expect = 3e-49
 Identities = 70/259 (27%), Positives = 102/259 (39%), Gaps = 19/259 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRH 61
           RL GKVA++ G+  GIG A A      GA V++          +VVS I      A    
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+R   ++ +    A+  +G LDI  SN+GV    G + D+   +FDR  + N  G   
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQFF 133

Query: 122 AVKYAARVMVANKIRGSIICTTST-ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             + A R +      G I+ T+S  +          Y+ SK  +   VR  + + G   I
Sbjct: 134 VAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKI 190

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVAN-------LKGIVLK----AKHVAEAALFL 229
            VN V+P G  T       +                       L      + VA    FL
Sbjct: 191 TVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL 250

Query: 230 ASDESAYVSGHDLVVDGGF 248
            S E  +V+G  L +DGG 
Sbjct: 251 VSKEGEWVNGKVLTLDGGA 269

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  162 bits (412), Expect = 4e-49
 Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 20/260 (7%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYR 60
             L GKVA+  GA  GIG   A      GA V++          +VV+ +     +    
Sbjct: 17  KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 76

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+    +V      A+  +G LD + SN+G+       L++    FD+    N  G  
Sbjct: 77  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQF 135

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHG 179
              +   +        G II T+S A+ + G   HA Y  SK  + G  R+ A + G  G
Sbjct: 136 FVAQQGLKHCRRG---GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 192

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVAN--------LKGIVLK----AKHVAEAAL 227
           + VNC++P GV T               K                LK       +  A  
Sbjct: 193 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 252

Query: 228 FLASDESAYVSGHDLVVDGG 247
            L  +ES +++G  + + GG
Sbjct: 253 ALCQEESEWINGQVIKLTGG 272

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  161 bits (409), Expect = 7e-49
 Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 27/270 (10%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
               + A+I     G+G+   +     G  V +    D    + +     +   +  +  
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAG 118
            DV  ++ + + V  A+  +G +D + +NAG    V     ++D +  +++  I  NL  
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAG--PYVFERKKLVDYEEDEWNEMIQGNLTA 121

Query: 119 SVMAVKYAARVMVANKIRGSII--CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
               +K    VM      G II        S  G     A+  +K GL+ L ++ A E  
Sbjct: 122 VFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA 180

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
           ++GI  N V P  +       TI +      +        +      + +A    FL  D
Sbjct: 181 EYGITANMVCPGDIIGEMKEATIQEA-----RQLKEHNTPIGRSGTGEDIARTISFLCED 235

Query: 233 ESAYVSGHDLVVDGGFTAVTNVMSMLEGHG 262
           +S  ++G  + V G        + ++   G
Sbjct: 236 DSDMITGTIIEVTGA-------VDVIHREG 258

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  159 bits (406), Expect = 1e-48
 Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 27/261 (10%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L+GKVA++ GA+ GIG+A A+L AE GA VI     +     +   +G +       +V 
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVT 65

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSVM 121
           + + +E  +    +++G +DI+ +NAG+     T  +L M     ++   + TNL     
Sbjct: 66  NPESIEAVLKAITDEFGGVDILVNNAGI-----TRDNLLMRMKEEEWSDIMETNLTSIFR 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             K   R M+  + +G II   S   T+G +G   Y  +K G++G  +S A E+   G+ 
Sbjct: 121 LSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 179

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
           VN V+P  + T  +    ++      + A L  +        + +A A  FLAS E+AY+
Sbjct: 180 VNTVAPGFIETDMTKALNDEQ-----RTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 234

Query: 238 SGHDLVVDGGFTAVTNVMSML 258
           +G  L V+GG       M M+
Sbjct: 235 TGETLHVNGG-------MYMI 248

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  160 bits (406), Expect = 2e-48
 Identities = 53/254 (20%), Positives = 87/254 (34%), Gaps = 16/254 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
            + G+V ++ GA+ GIG   A    + GA V I     +    V         +     C
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 63  DVRDEKQVEETVAYA-IEKYGSLDIMYSNAGVAGPV------GTILDLDMAQFDRTIATN 115
           D   E +V         E+ G LD++ +NA                +   + +D      
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L G      Y AR+MV    +G I+  +S  S +       Y + K     L    A EL
Sbjct: 122 LRGHYFCSVYGARLMVPAG-QGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVE----GFVCKVANLKGIVLKAKHVAEAALFLAS 231
            +HG+    + P  V T      +   E      + +  +        +   +  + LA+
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239

Query: 232 DE-SAYVSGHDLVV 244
           D     +SG  L  
Sbjct: 240 DPNILSLSGKVLPS 253

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  159 bits (404), Expect = 2e-48
 Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 25/254 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           +     I+ G    +G A  + F ++G  V+  D+              +       +  
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND--------QADSNILVDGNKN 52

Query: 66  DEKQVEETVAYAIE--KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             +Q +  +       +   +D ++  AG            +   D  I  ++  S +A 
Sbjct: 53  WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KHGIR 181
           K A   +   K  G +  T + A+         Y ++K  +  L  S A++         
Sbjct: 113 KLATTHL---KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 169

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY-VSGH 240
           V  + P  + TP +   + +        A+          ++E  L   ++ S+   SG 
Sbjct: 170 VLTIMPVTLDTPMNRKWMPN--------ADHSSWT-PLSFISEHLLKWTTETSSRPSSGA 220

Query: 241 DLVVDGGFTAVTNV 254
            L +       T  
Sbjct: 221 LLKITTENGTSTIT 234

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  160 bits (406), Expect = 3e-48
 Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 9/205 (4%)

Query: 1   MSKPR--LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--K 56
           M K R  + G++ +I GA  GIG  TA  FA+  + +++ DI      +  +       K
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81

Query: 57  ASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL 116
                 D  + + +  +      + G + I+ +NAGV      +      Q ++T   N+
Sbjct: 82  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNV 140

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL- 175
                  K     M  N   G I+   S A  V      AY  SK   +G  ++   EL 
Sbjct: 141 LAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA 199

Query: 176 --GKHGIRVNCVSPFGVATPFSAGT 198
                G++  C+ P  V T F    
Sbjct: 200 ALQITGVKTTCLCPNFVNTGFIKNP 224

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  159 bits (404), Expect = 4e-48
 Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 17/256 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH---- 61
           +QGK+A++   +SG+G A+A   A +GA +++     E      S I    +  +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+R+   ++          G  DI+  + G   P G  ++L +  +D +       +V 
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRP-GRFMELGVEDWDESYRLLARSAVW 122

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + AA  MV     G ++   S              I +  ++G+VR+ A EL  HG+ 
Sbjct: 123 VGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKV------ANLKGIVLK----AKHVAEAALFLAS 231
           VN V P  + T        +              +    I +      + +A    FLAS
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241

Query: 232 DESAYVSGHDLVVDGG 247
           +++++++G  + VDGG
Sbjct: 242 EKASFITGAVIPVDGG 257

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  161 bits (409), Expect = 5e-48
 Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 23/253 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
           RL G    I GA+ GIG+A A   A+ GA ++IA    +   +++ +I            
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           KA     DVRDE+Q+   V  AI+K+G +DI+ +NA     +   LD    + D  +  N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVN 160

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPHAYTISKHGLLGLVRSAAS 173
             G+ +A K     +  +K    I+  +   +          AYTI+K+G+   V   A 
Sbjct: 161 TRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAE 219

Query: 174 ELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE 233
           E  K  I VN + P       +   +            ++    K   +A+AA  +    
Sbjct: 220 EF-KGEIAVNALWPKTAIHTAAMDMLGGPG--------IESQCRKVDIIADAAYSIFQK- 269

Query: 234 SAYVSGHDLVVDG 246
               +G+ ++ + 
Sbjct: 270 PKSFTGNFVIDEN 282

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  158 bits (402), Expect = 1e-47
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 27/261 (10%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L G+ A++ GA  GIGEA A+ F   GA V +   +++   ++ + +G +       ++ 
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-KDVFVFSANLS 83

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSVM 121
           D K +++    A  +   +DI+ +NAG+     T   L +      +D  +A NL  +  
Sbjct: 84  DRKSIKQLAEVAEREMEGIDILVNNAGI-----TRDGLFVRMQDQDWDDVLAVNLTAAST 138

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +     M+  +  G II  TS    VG  G   Y  +K GL+G  ++ A E+    I 
Sbjct: 139 LTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
           VNC++P  + +  +            K A +  I +K     + +A A ++LASDE+AY+
Sbjct: 198 VNCIAPGFIKSAMTDKLNEKQ-----KEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL 252

Query: 238 SGHDLVVDGGFTAVTNVMSML 258
           +G  L ++GG       M+M+
Sbjct: 253 TGQTLHINGG-------MAMI 266

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  158 bits (402), Expect = 1e-47
 Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 21/252 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
            + KVA++ GA  GIG   AK+ A+  + VI      +  + VV  I     ++S    D
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLAGS 119
           V  ++++ E +   + ++ ++DI+ +NAG+     T     L +   +++  + TNL   
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI-----TRDNLFLRMKNDEWEDVLRTNLNSL 156

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               +  ++ M+ N+  G II  +S     G  G   Y+ SK G++G  +S A EL    
Sbjct: 157 FYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRN 215

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
           I VN ++P  +++  +      +     K   +  I        + VA  A FL+SD+S 
Sbjct: 216 ITVNAIAPGFISSDMTDKISEQI-----KKNIISNIPAGRMGTPEEVANLACFLSSDKSG 270

Query: 236 YVSGHDLVVDGG 247
           Y++G   V+DGG
Sbjct: 271 YINGRVFVIDGG 282

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  157 bits (399), Expect = 2e-47
 Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 17/253 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            ++  VA++ G ASG+G AT K   + GA V++ DI+   G  VV+ +G ++A +   DV
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLG-DRARFAAADV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI---LDLDMAQFDRTIATNLAGSVM 121
            DE  V   +    E  G+L I+ + AG    +  +       +A F + +  NL GS  
Sbjct: 62  TDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFN 120

Query: 122 AVKYAARVMVANKI-------RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
            ++ AA  +   +        RG II T S A+  G  G  AY+ SK G++G+    A +
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
           L  H IRV  ++P    TP  A    +    + K       +         A+ +   E+
Sbjct: 181 LASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHII--EN 238

Query: 235 AYVSGHDLVVDGG 247
             ++G  + +DG 
Sbjct: 239 PMLNGEVIRLDGA 251

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  156 bits (398), Expect = 4e-47
 Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 29/271 (10%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRH 61
           L+GK A++ G+ +GIG+A A      GA V+I   ++E  N+ +  I             
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+  E+  ++     IEKY  +DI+ +N G+  P     D+    + +    N+   V 
Sbjct: 68  ADLGTEQGCQD----VIEKYPKVDILINNLGIFEP-VEYFDIPDEDWFKLFEVNIMSGVR 122

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +   + M+  K  G +I   S A+ +       Y+ +K   L L RS A       + 
Sbjct: 123 LTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCK----------VANLKGIVLK----AKHVAEAAL 227
           VN + P    T      +N +                  N    +++     + +A    
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241

Query: 228 FLASDESAYVSGHDLVVDGGFTAVTNVMSML 258
           FL+S  S+ ++G  L +DGG      V S+ 
Sbjct: 242 FLSSPLSSAINGSALRIDGGL-----VRSVF 267

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  156 bits (396), Expect = 7e-47
 Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 21/252 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L  +VAI+ GA+ GIG A A   A  GA VI     +     + ++      +      +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGS 119
           V D   V+  V   ++++G+L+++ +NAG+     T   L M     ++D  I TNL   
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGI-----TQDQLAMRMKDDEWDAVIDTNLKAV 140

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               +   R M+  +  G I+  TS   + G  G   Y  +K G+ G+ R+ A E+G  G
Sbjct: 141 FRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
           I VNCV+P  + T  + G   +      + A    I L      + +A A  FLAS ++ 
Sbjct: 200 ITVNCVAPGFIDTDMTKGLPQEQ-----QTALKTQIPLGRLGSPEDIAHAVAFLASPQAG 254

Query: 236 YVSGHDLVVDGG 247
           Y++G  L V+GG
Sbjct: 255 YITGTTLHVNGG 266

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  155 bits (394), Expect = 7e-47
 Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 29/264 (10%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
           +KP    +  ++ G   GIG A A+  A  G  V +             S  P+      
Sbjct: 9   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVE 59

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   V+       E  G ++++ SNAG++     ++ +   +F++ I  NL G+  
Sbjct: 60  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD-AFLMRMTEEKFEKVINANLTGAFR 118

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A+R M  NK  G +I   S +   G      Y  SK G++G+ RS A EL K  + 
Sbjct: 119 VAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 177

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
            N V+P  + T  +      +     +   L+ I  K       VA    FLAS++++Y+
Sbjct: 178 ANVVAPGYIDTDMTRALDERI-----QQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 232

Query: 238 SGHDLVVDGGFTAVTNVMSMLEGH 261
           SG  + VDGG       M M  GH
Sbjct: 233 SGAVIPVDGG-------MGM--GH 247

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  155 bits (394), Expect = 8e-47
 Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 28/262 (10%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L  KVA++ GA+ GIG   A   A  GA V+          +  +S+  +  KA     +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGS 119
           + D + ++   A    +  ++DI+ +NAG+     T  +L M     ++   I TNL+  
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGI-----TRDNLMMRMSEDEWQSVINTNLSSI 117

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               K   R M+  +  G II   S   + G  G   Y  +K G++G  +S A E+    
Sbjct: 118 FRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESA 235
           I VN V+P  +AT  +    ++      K      I        K +A A  FLAS+E+ 
Sbjct: 177 ITVNVVAPGFIATDMTDKLTDEQ-----KSFIATKIPSGQIGEPKDIAAAVAFLASEEAK 231

Query: 236 YVSGHDLVVDGGFTAVTNVMSM 257
           Y++G  L V+GG       M M
Sbjct: 232 YITGQTLHVNGG-------MYM 246

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  154 bits (393), Expect = 1e-46
 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 22/254 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KASYRH 61
           +L+GK AI+ G++ G+G+A A      GA +++         +                 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLA 117
            DV++ + VE  V  A++ +G +DI+ +NAG+     T    +L +    +D  + TNL 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGI-----TRDTLMLKMSEKDWDDVLNTNLK 116

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
            + +  K  +++M+  K  G II  TS A  +G +G   Y  SK GL+G  +S A E   
Sbjct: 117 SAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            GI  N V+P  + T  +    + V     K   L  I LK     + VA    FLASD+
Sbjct: 176 KGIYCNAVAPGIIKTDMTDVLPDKV-----KEMYLNNIPLKRFGTPEEVANVVGFLASDD 230

Query: 234 SAYVSGHDLVVDGG 247
           S Y++G  + +DGG
Sbjct: 231 SNYITGQVINIDGG 244

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  155 bits (395), Expect = 2e-46
 Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKA 57
                LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS     G   A
Sbjct: 21  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 80

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
            Y    + D    E+ VA A +  G LD++  N         +   D+    +++  N  
Sbjct: 81  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT-NTSLNLFHDDIHHVRKSMEVNFL 139

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG- 176
             V+    A  ++  +   GSI+  +S A  V      AY+ SK  L G   S   E   
Sbjct: 140 SYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSV 197

Query: 177 -KHGIRVNCVSPFGVATPFSAGTIND 201
            +  + +       + T  +   ++ 
Sbjct: 198 SRVNVSITLCVLGLIDTETAMKAVSG 223

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  154 bits (392), Expect = 2e-46
 Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 22/253 (8%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRHC 62
           LQGKV+++ G+  GIG A A+  A  G+ VII     E    V   I  +   KA     
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAG 118
           ++  E+ + +           +DI+ +NAG+     T   L +      ++  +  NL G
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI-----TRDKLFLRMSLLDWEEVLKVNLTG 119

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           + +  + + R M+  +  G I+  +S     G  G   Y+ +K GL+G  +S A EL   
Sbjct: 120 TFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDES 234
            + VN V+P  + T  +A    ++     K    + I L      + VA   LFL S+ +
Sbjct: 179 NVLVNAVAPGFIETDMTAVLSEEI-----KQKYKEQIPLGRFGSPEEVANVVLFLCSELA 233

Query: 235 AYVSGHDLVVDGG 247
           +Y++G  + V+GG
Sbjct: 234 SYITGEVIHVNGG 246

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  154 bits (391), Expect = 3e-46
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 31/261 (11%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK ++I GA+SGIG A A+L  + G+ VII+   +E    + +++  +  +   C++ 
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLA 70

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSVM 121
           ++++        I K  +LDI+  NAG+     T   L +      FD+ I  NL  + +
Sbjct: 71  NKEECSN----LISKTSNLDILVCNAGI-----TSDTLAIRMKDQDFDKVIDINLKANFI 121

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A + M+  +  G II  +S     G  G   Y  SK GL+G+ +S + E+   GI 
Sbjct: 122 LNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYV 237
           VN V+P  + +  +            + A ++ I L      + VA A  FLAS+ ++Y+
Sbjct: 181 VNAVAPGFIKSDMTDKLNEKQ-----REAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235

Query: 238 SGHDLVVDGGFTAVTNVMSML 258
           +G  L V+GG       M M+
Sbjct: 236 TGQTLHVNGG-------MLMV 249

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  153 bits (388), Expect = 8e-46
 Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 37/269 (13%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
           +       +  ++ G   GIG A A+ FA+ G  V I            S   PE     
Sbjct: 14  LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITY---------RSGEPPEGFLAV 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNL 116
            CD+ D +QVE+      E +G ++++ +NAGV     T   L M      F   + TNL
Sbjct: 65  KCDITDTEQVEQAYKEIEETHGPVEVLIANAGV-----TKDQLLMRMSEEDFTSVVETNL 119

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
            G+   VK A R M+  K +G ++  +S    +G +G   Y  SK GL+G  RS A ELG
Sbjct: 120 TGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELG 178

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD 232
              I  N V+P  V T  +    ++      +   +  + L      + +A    FLASD
Sbjct: 179 SRNITFNVVAPGFVDTDMTKVLTDEQ-----RANIVSQVPLGRYARPEEIAATVRFLASD 233

Query: 233 ESAYVSGHDLVVDGGFTAVTNVMSMLEGH 261
           +++Y++G  + VDGG       + M  GH
Sbjct: 234 DASYITGAVIPVDGG-------LGM--GH 253

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  152 bits (387), Expect = 9e-46
 Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 29/263 (11%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGP--EKASYRHC 62
           L+GKVA++ GA+ GIG A A   A+ GA V++     ++  N+VV  I      A     
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLAG 118
           DV + + V   V   ++ +G +DI+ +NAGV     T    ++ +   ++D  I TNL G
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGV-----TKDNLLMRMKEEEWDTVINTNLKG 116

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
             +  K  +R M+  +  G I+   S     G  G   Y  +K G++GL +++A EL   
Sbjct: 117 VFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASR 175

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDES 234
            I VN ++P  +AT  +     ++     K   LK I       A+ +A A  F ASD+S
Sbjct: 176 NITVNAIAPGFIATDMTDVLDENI-----KAEMLKLIPAAQFGEAQDIANAVTFFASDQS 230

Query: 235 AYVSGHDLVVDGGFTAVTNVMSM 257
            Y++G  L VDGG       M M
Sbjct: 231 KYITGQTLNVDGG-------MVM 246

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  152 bits (386), Expect = 1e-45
 Identities = 52/227 (22%), Positives = 83/227 (36%), Gaps = 13/227 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L+ K+A++ GA  G+G    K  +       +    + L   +    G         D+
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEG---VEPIESDI 57

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E   E  V   ++    +D +   A VA    TI    +A++   +  N+       +
Sbjct: 58  VKEVLEEGGVD-KLKNLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSR 115

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                + A    G +I   S A      G   Y  SKH L GL  +   E   +GIRV+ 
Sbjct: 116 QLLPALRAA--SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVST 173

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           VSP    TP   G + D +           I ++ K +A A  F+  
Sbjct: 174 VSPGPTNTPMLQG-LMDSQ----GTNFRPEIYIEPKEIANAIRFVID 215

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  152 bits (386), Expect = 2e-45
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KASYRHC 62
              K A++ GA+ GIG + A   AE G  V +      E    VV  I  +   +     
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLAG 118
           +V D  +V+  +   + ++GSLD++ +NAG+     T    ++ +   ++D  I TNL G
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGI-----TRDNLLMRMKEQEWDDVIDTNLKG 116

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
               ++ A   M+  +  G+II  +S    VG  G   Y  +K G++GL +SAA EL   
Sbjct: 117 VFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR 175

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDES 234
           GI VN V+P  + +  +    +++     K   L  I L        +A    FLASD++
Sbjct: 176 GITVNAVAPGFIVSDMTDALSDEL-----KEQMLTQIPLARFGQDTDIANTVAFLASDKA 230

Query: 235 AYVSGHDLVVDGGFTAVTNVMSM 257
            Y++G  + V+GG       M M
Sbjct: 231 KYITGQTIHVNGG-------MYM 246

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  151 bits (385), Expect = 2e-45
 Identities = 68/247 (27%), Positives = 102/247 (41%), Gaps = 21/247 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           + A++ G ASG+G A A      G  V++ D++ E  +            Y   DV  E+
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED----------LIYVEGDVTREE 52

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTI---LDLDMAQFDRTIATNLAGSVMAVKY 125
            V   VA A E+   L  + S AGV      +       +  F R +  NL G+   ++ 
Sbjct: 53  DVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 126 AARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           AA  M  N       RG I+ T S A+  G  G  AY  SK G++ L   AA EL   GI
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH 240
           RV  V+P    TP   G     +  +         + + +  A   L +   E+  ++G 
Sbjct: 172 RVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLNGE 229

Query: 241 DLVVDGG 247
            + +DG 
Sbjct: 230 VVRLDGA 236

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  151 bits (383), Expect = 1e-44
 Identities = 63/289 (21%), Positives = 98/289 (33%), Gaps = 45/289 (15%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-------------ADIQDELGNQ 47
           M+       VA++ GAA  +G + A+     G  V +             A +     N 
Sbjct: 4   MTA--PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS 61

Query: 48  VV--------SSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT 99
            +         +  P   +     V    +  E VA     +G  D++ +NA    P   
Sbjct: 62  AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TP 120

Query: 100 ILDLDMAQFDRT--------------IATNLAGSVMAVKYAARVMVANKI-----RGSII 140
           +L  D    +                  +N       +K  A  +            SII
Sbjct: 121 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSII 180

Query: 141 CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN 200
                 +     G   YT++K  L GL RSAA EL    IRVN V P G  +        
Sbjct: 181 NMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVLVDDMPP 238

Query: 201 DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
            V         L      A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 239 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  152 bits (385), Expect = 1e-44
 Identities = 62/285 (21%), Positives = 97/285 (34%), Gaps = 43/285 (15%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-------------ADIQDELGNQVV-- 49
                VA++ GAA  +G + A+     G  V +             A +     N  +  
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 50  ------SSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDL 103
                  +  P   +     V    +  E VA     +G  D++ +NA    P   +L  
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRN 161

Query: 104 DMAQFD--------------RTIATNLAGSVMAVKYAARVMVANKIR-----GSIICTTS 144
           D    +                  +N       +K  A  +     +      SII    
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 145 TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG 204
             +     G   YT++K  L GL RSAA EL    IRVN V P G  +         V  
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVLVDDMPPAVWE 279

Query: 205 FVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
                  L      A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 280 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  149 bits (378), Expect = 3e-44
 Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 22/260 (8%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII--ADIQDELGNQVVSSIGPE--KA 57
           +   L+GKVA++ GA+ GIG A AK  A  GA V I   + ++E   + V  I      A
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSA 59

Query: 58  SYRHCDVRDEKQVEETVAYAIEK------YGSLDIMYSNAGVAGPVGTILDLDMAQFDRT 111
                ++     VE   +    +          DI+ +NAG+ GP   I +     FDR 
Sbjct: 60  FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRM 118

Query: 112 IATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSA 171
           ++ N       ++ A   +  N     II  +S A+ +      AY+++K  +  +  + 
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDN---SRIINISSAATRISLPDFIAYSMTKGAINTMTFTL 175

Query: 172 ASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAAL 227
           A +LG  GI VN + P  V T  +A  ++D      K               + +A+ A 
Sbjct: 176 AKQLGARGITVNAILPGFVKTDMNAELLSDPMM---KQYATTISAFNRLGEVEDIADTAA 232

Query: 228 FLASDESAYVSGHDLVVDGG 247
           FLAS +S +V+G  + V GG
Sbjct: 233 FLASPDSRWVTGQLIDVSGG 252

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  148 bits (375), Expect = 6e-44
 Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 30/261 (11%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSI---GPEKASYRHCDV 64
           + A+I GA+ GIG A A   AE G  + I      E   +V       G    +    ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSV 120
            + +     V  A E  G LD + +NAG+     T   L +      ++  +  NL+   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGI-----TRDTLLVRMKDEDWEAVLEANLSAVF 116

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
              + A ++M+  +  G I+  TS    +G  G   Y  SK GL+G  R+ A E  + GI
Sbjct: 117 RTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAY 236
            VN V+P  + T  +     +V     K A LK I        + VAEA  FL S+++ Y
Sbjct: 176 TVNAVAPGFIETEMTERLPQEV-----KEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGY 230

Query: 237 VSGHDLVVDGGFTAVTNVMSM 257
           ++G  L VDGG       ++ 
Sbjct: 231 ITGQTLCVDGG-------LTP 244

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  148 bits (376), Expect = 2e-43
 Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 23/264 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------- 55
            + G+V I+ GA  GIG A A  FA  GA V++ DI   L     S              
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 56  ---KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
              +A     +V D  Q    +  A+E +G LD++ +NAG+      I +    +FD  I
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RMIANTSEEEFDAVI 142

Query: 113 ATNLAGSVMAVKYAARVMVANKIR-----GSIICTTSTASTVGGSGPHAYTISKHGLLGL 167
           A +L G    +++AA              G II T+S A   G  G   Y+ +K G+  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAAL 227
               A+E+G++G+ VN ++P    T  +     ++     +  +     +  ++V+   +
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP-SARTRMTETVFAEMMATQDQDFDA----MAPENVSPLVV 257

Query: 228 FLASDESAYVSGHDLVVDGGFTAV 251
           +L S E+  V+G    V+GG   V
Sbjct: 258 WLGSAEARDVTGKVFEVEGGKIRV 281

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  146 bits (371), Expect = 4e-43
 Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 25/265 (9%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KA 57
           M+   L  ++A++ GA+ GIG A A   A  GA V +         ++VV++I     +A
Sbjct: 21  MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEA 80

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                DV  E +VE   A  IE++G LD++ +NAG+      +L +    +   +  NL 
Sbjct: 81  FAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQSVLDLNLG 139

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G  +  + AA++M+  +  G II   S    +G  G   Y+ +K G++GL ++ A EL  
Sbjct: 140 GVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS 198

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASD- 232
            GI VN V+P  +AT  ++    +          L+ I L     A  VA    FLA+D 
Sbjct: 199 RGITVNAVAPGFIATDMTSELAAE--------KLLEVIPLGRYGEAAEVAGVVRFLAADP 250

Query: 233 ESAYVSGHDLVVDGGFTAVTNVMSM 257
            +AY++G  + +DGG       + M
Sbjct: 251 AAAYITGQVINIDGG-------LVM 268

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  146 bits (371), Expect = 5e-43
 Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 13/237 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYR 60
           R + ++A++ GA+ GIG A A+   + G  V+         +EL  +  S+  P      
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CD+ +E+ +    +    ++  +DI  +NAG+A    T+L    + +      N+    
Sbjct: 89  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALS 147

Query: 121 MAVKYAARVMVANKI-RGSIICTTSTA--STVGGSGPHAYTISKHGLLGLVRSAASELG- 176
           +  + A + M    +  G II   S +    +  S  H Y+ +K+ +  L      EL  
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 207

Query: 177 -KHGIRVNCVSPFGVATPFSAG-TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
            +  IR  C+SP  V T F+      D E        +K   LK + VAEA +++ S
Sbjct: 208 AQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKC--LKPEDVAEAVIYVLS 262

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  144 bits (367), Expect = 6e-43
 Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 31/235 (13%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGPEKAS 58
           + KVA+I GA+ GIGEA A+  A  G  + +          I  EL  +        +  
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-----QGVEVF 55

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
           Y H DV   + VEE     +E++G +D++ +NAG+      + +L   +F   I  NL G
Sbjct: 56  YHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLG 114

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTV--GGSGPHAYTISKHGLLGLVRSAASELG 176
               +K     +       +++ T+  ++ +   G G   Y  +K     LVR+   E  
Sbjct: 115 VWRTLKAFLDSLKRTG-GLALVTTSDVSARLIPYGGG---YVSTKWAARALVRTFQIE-- 168

Query: 177 KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
              +R   + P  V T F                  +   LK   +AEA   L  
Sbjct: 169 NPDVRFFELRPGAVDTYFGGSKPGK---------PKEKGYLKPDEIAEAVRCLLK 214

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  152 bits (386), Expect = 8e-43
 Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 28/265 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG---------NQVVSS 51
           MS    + KV II GA  G+G+  +  FA+ GA V++ D+   L          + VV  
Sbjct: 1   MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDE 60

Query: 52  IGPE--KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
           I      A   + +V D    ++ V  A++ +G++ ++ +NAG+     ++  +    + 
Sbjct: 61  IVKNGGVAVADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRD-ASMKKMTEKDYK 116

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
             I  +L G+    K A       K  G I+ T+S A   G  G   Y  +K  LLG   
Sbjct: 117 LVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQANYASAKSALLGFAE 175

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL 229
           + A E  K+ I+ N ++P    +  +   +                 L  + VA   L+L
Sbjct: 176 TLAKEGAKYNIKANAIAPLA-RSRMTESIMPPP----------MLEKLGPEKVAPLVLYL 224

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNV 254
           +S     ++G    V  GF A    
Sbjct: 225 SS-AENELTGQFFEVAAGFYAQIRW 248

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  138 bits (349), Expect = 1e-37
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 20/256 (7%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KAS 58
                L+ KV +I GA +G+G+  AK FA++GA V++ D +D    + V  I     +A 
Sbjct: 315 APTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAW 372

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               DV  +   E  +   I+KYG++DI+ +NAG+     +   +   ++D     +L G
Sbjct: 373 PDQHDVAKD--SEAIIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQVHLIG 429

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
           +    + A    V  +  G II  TST+   G  G   Y+ SK G+LGL ++ A E  K+
Sbjct: 430 TFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKN 488

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
            I+VN V+P    T  +   + + +            +  A  VA   ++L + +   V+
Sbjct: 489 NIKVNIVAPHA-ETAMTLSIMREQDKN----------LYHADQVAPLLVYLGT-DDVPVT 536

Query: 239 GHDLVVDGGFTAVTNV 254
           G    + GG+   T  
Sbjct: 537 GETFEIGGGWIGNTRW 552

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  149 bits (379), Expect = 1e-42
 Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 22/256 (8%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR 60
             KP L GKVA++ GAA GIG   A++FA  GA V+  D+ D     +         +  
Sbjct: 207 WDKP-LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAAEDLKRVADKVGGTAL 264

Query: 61  HCDVRDEKQVEETVAYAIEKYG-SLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATN 115
             DV  +  V++  A+  E +G  +DI+ +NAG+     T    + ++D  ++D  IA N
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI-----TRDKLLANMDEKRWDAVIAVN 319

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L       +         +  G +I  +S A   G  G   Y  +K G++GL  + A  L
Sbjct: 320 LLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVL 378

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLAS 231
              GI +N V+P  + T  +            +    +   L        VAE   + AS
Sbjct: 379 ADKGITINAVAPGFIETKMTEAIPLAT-----REVGRRLNSLFQGGQPVDVAELIAYFAS 433

Query: 232 DESAYVSGHDLVVDGG 247
             S  V+G+ + V G 
Sbjct: 434 PASNAVTGNTIRVCGQ 449

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  143 bits (362), Expect = 5e-42
 Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPE--KASYRHCDVR 65
            V ++ GA+ GIG+A A    + G  V++   +      +V   I     +A     DV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            E  VE  +  AI+ +G++D++ +NAG+      ++ +  +Q+D  I  NL G  +  + 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A ++M+  + +G II   S    +G  G   Y  +K G++G  ++AA E     I VN V
Sbjct: 121 ATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLA-SDESAYVSGH 240
            P  +A+  +A    D+     +   L  I L      ++VA    FLA S  ++Y++G 
Sbjct: 180 CPGFIASDMTAKLGEDM-----EKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234

Query: 241 DLVVDGGFTAVTNVMSM 257
              +DGG       +++
Sbjct: 235 AFTIDGG-------IAI 244

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  143 bits (362), Expect = 5e-42
 Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 22/241 (9%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSI 52
           M    LQGKVA+I GA+SGIGEATA+  A  GA V IA         + DEL        
Sbjct: 1   MPSA-LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA----- 54

Query: 53  GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTI 112
              K      DV D + V+  VA  +E  G LDI+ +NAG+   +G + D D   + R I
Sbjct: 55  -GAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMI 112

Query: 113 ATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAA 172
            TNL G +   + A   ++ +K  G+++  +S A  V       Y  +K G+     +  
Sbjct: 113 DTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLR 170

Query: 173 SELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLA 230
            E+ + G+RV  + P    T    G I               +   L+A+ +AEA  +  
Sbjct: 171 QEVTERGVRVVVIEPGTTDTEL-RGHITH-TATKEMYEQRISQIRKLQAQDIAEAVRYAV 228

Query: 231 S 231
           +
Sbjct: 229 T 229

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  143 bits (362), Expect = 6e-42
 Identities = 53/254 (20%), Positives = 91/254 (35%), Gaps = 14/254 (5%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIGPE--KA 57
                +  ++A + G   GIG +  +   + G  V+           + +          
Sbjct: 6   HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDF 65

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                +V D    ++       + G +D++ +NAG+         +    +   I TNL 
Sbjct: 66  YASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRD-VVFRKMTREDWQAVIDTNLT 124

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
                 K     MV     G II  +S     G  G   Y+ +K G+ G   S A E+  
Sbjct: 125 SLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVAT 183

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            G+ VN VSP  + T        DV         +  I ++       +     +LAS+E
Sbjct: 184 KGVTVNTVSPGYIGTDMVKAIRPDV-----LEKIVATIPVRRLGSPDEIGSIVAWLASEE 238

Query: 234 SAYVSGHDLVVDGG 247
           S + +G D  ++GG
Sbjct: 239 SGFSTGADFSLNGG 252

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  143 bits (362), Expect = 9e-42
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 13/249 (5%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRHC 62
              +VA + G   G+G A ++   + G  V ++  +             +          
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV D +  E      +  +G +D++ +NAG+     T + +    +D  + T+L      
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRD-ATFMKMTKGDWDAVMRTDLDAMFNV 141

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            K     MV  +  G I+   S   + G  G   Y  +K G+ G  ++ A E  K GI V
Sbjct: 142 TKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N VSP  +AT        DV     +   L  I +        VA    FL SD++ +V+
Sbjct: 201 NTVSPGYLATAMVEAVPQDVL----EAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVT 256

Query: 239 GHDLVVDGG 247
           G DL ++GG
Sbjct: 257 GADLAINGG 265

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  142 bits (360), Expect = 1e-41
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 23/251 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++ K  +++ A+ GIG A A + ++ GA V I    +EL  +              CD+R
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV-------CDLR 69

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            +      +    EK   +DI+  NAG     G   +L    F   I +     +  V+ 
Sbjct: 70  KD------LDLLFEKVKEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRN 122

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M      G I+  TS +        +    ++  L G +++ + E+  +GI VNCV
Sbjct: 123 YLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 181

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVSGHD 241
           +P    T      +++ +    K      I ++     + +A    FL S++++Y++G  
Sbjct: 182 APGWTETERVKELLSEEK----KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT 237

Query: 242 LVVDGGFTAVT 252
           +VVDGG +   
Sbjct: 238 IVVDGGLSKFP 248

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  141 bits (358), Expect = 3e-41
 Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 15/232 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA----DIQDELGNQVVSSIGPEKASYR 60
               K+ +I GA+SGIGEA A+ F+E G  +++     +    L                
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL--------PNTLCA 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV D+   +  +  A + YG  D + +NAG+   +G I   +  ++ R    N+ G +
Sbjct: 65  QVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLL 123

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++     M A    G+II  +S A         AY  +K  +  +  +   E+    +
Sbjct: 124 NGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNV 182

Query: 181 RVNCVSPFGVATPF-SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           RV  ++P  V T   S  T   ++          G VL A  VA A LF   
Sbjct: 183 RVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQ 234

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  141 bits (357), Expect = 4e-41
 Identities = 51/238 (21%), Positives = 92/238 (38%), Gaps = 18/238 (7%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGP 54
           +         I GA SG GEA A+ FAE G  +++          +  EL  +       
Sbjct: 16  RGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT------ 69

Query: 55  EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT 114
            +      DVRD   +   V    E++ +L  + +NAG+A         D+  +D  + T
Sbjct: 70  -RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           N+ G + + +     ++A+    SI+   S A      G H Y  +K  +     +   +
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCD 188

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV-LKAKHVAEAALFLAS 231
           L   G+RV  + P    + FS       +    K     G   ++ + +AE   ++ +
Sbjct: 189 LQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT--YAGAHPIQPEDIAETIFWIMN 244

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  140 bits (354), Expect = 9e-41
 Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 21/256 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAE---HGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
            L   V ++ GA+ G G A A   A     G+ ++++   + +  Q+   +G ++   + 
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 62  ----CDVRDEKQVEETVAYAIEKYG----SLDIMYSNAGVAGPV--GTILDLDMAQFDRT 111
                D+  E  V+  ++   E          ++ +NA   G V  G +   D+A+ +  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 112 IATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
            A NL   +            +  +  +++  +S  +     G   Y   K     L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 171 AASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK--VANLK--GIVLKAKHVAEAA 226
            A+E  +  +RV   +P  +            +    +  +  LK  G ++     A+  
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 227 LFLASDESAYVSGHDL 242
           L L   ++ + SG  +
Sbjct: 241 LGLLQKDT-FQSGAHV 255

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  139 bits (354), Expect = 1e-40
 Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 22/235 (9%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGPEKA 57
           +  KV +I GA+ GIGE  A+     GA +++          I  E+ +          A
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA------GGTA 55

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
             +  DV D   V      A++ +G +D++ +NAGV   +  +  + + +++R I  N+ 
Sbjct: 56  LAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIK 114

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G +  +     +M A +  G II   S  +         Y  +K  +  +      E   
Sbjct: 115 GVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--S 171

Query: 178 HGIRVNCVSPFGVATPFSAG-TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
             IRV CV+P  V +  +   T  +       +   + I L+   +A A   +  
Sbjct: 172 TNIRVTCVNPGVVESELAGTITHEETMA---AMDTYRAIALQPADIARAVRQVIE 223

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  139 bits (353), Expect = 5e-40
 Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 28/265 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG---------NQVVSS 51
            S  R  G+V ++ GA  G+G A A  FAE GA V++ D+  +           ++VV  
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 52  IGPE--KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
           I     KA   +  V      E+ V  A++ +G +D++ +NAG+     +   +    +D
Sbjct: 62  IRRRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWD 117

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
                +L GS    + A   M      G II T S +   G  G   Y+ +K GLLGL  
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL 229
           +   E  K+ I  N ++P    +  +   + + +             LK ++VA   L+L
Sbjct: 177 TLVIEGRKNNIHCNTIAPNA-GSRMTETVMPE-DLVE---------ALKPEYVAPLVLWL 225

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNV 254
              ES   +G    V  G+      
Sbjct: 226 CH-ESCEENGGLFEVGAGWIGKLRW 249

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  138 bits (350), Expect = 8e-40
 Identities = 54/235 (22%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAF---VIIA----DIQDELGNQVVSSIGPEKA 57
           RL  K  +I GA++GIG+ATA  + E       +I+A    +  +EL   +       K 
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                D+   ++++  +    +++  +DI+ +NAG A     +  +          TN+ 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
             +   +    +  A    G I+   S A          Y  SK  +     S   EL  
Sbjct: 150 ALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELIN 208

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV-LKAKHVAEAALFLAS 231
             IRV  ++P  V T FS       E     V   K    L A  VA+  ++  S
Sbjct: 209 TKIRVILIAPGLVETEFSLVRYRGNEEQAKNV--YKDTTPLMADDVADLIVYATS 261

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  139 bits (351), Expect = 6e-38
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 28/267 (10%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI---------QDELGNQVVSS 51
             K R  G+VA++ GA +G+G   A LFAE GA V++ D+              + VV  
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71

Query: 52  IGPE--KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD 109
           I     +A   +  V D  +V   +  AI+ +G +DI+ +NAG+     +++      ++
Sbjct: 72  IRKAGGEAVADYNSVIDGAKV---IETAIKAFGRVDILVNNAGILRD-RSLVKTSEQDWN 127

Query: 110 RTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR 169
                +L GS    + A   M      G II T+S +   G  G   YT +K GL+GL  
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL 229
           + A E  ++ +  N + P   A+  + G + D   F           LK K +A    +L
Sbjct: 187 TVAIEGARNNVLCNVIVPTA-ASRMTEGILPD-ILFN---------ELKPKLIAPVVAYL 235

Query: 230 ASDESAYVSGHDLVVDGGFTAVTNVMS 256
             +     +G  +    G+    +++ 
Sbjct: 236 CHES-CEDNGSYIESAAGWATKLHMVR 261

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  130 bits (330), Expect = 9e-38
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 25/189 (13%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
               +++GA+  +G A  +   +    +       ++                  D+ + 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDV----------------TVDITNI 46

Query: 68  KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAA 127
             +++      E+ G +D + S  G A     + +L   +   TI++ L G +  V    
Sbjct: 47  DSIKK----MYEQVGKVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGI 101

Query: 128 RVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSP 187
             +      GS   TT            +  ++   +    +SAA E+ + GIR+N VSP
Sbjct: 102 DSLNDK---GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157

Query: 188 FGVATPFSA 196
             +   +  
Sbjct: 158 NVLEESWDK 166

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  129 bits (328), Expect = 4e-37
 Identities = 45/231 (19%), Positives = 85/231 (36%), Gaps = 32/231 (13%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGPEKASYR 60
            + +I GA+SG+G   AKL+   G    +          + + L N V          YR
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNV---------GYR 52

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D+   ++VE+      +       +  +AG  G  G + + D  Q    I  NL+ ++
Sbjct: 53  ARDLASHQEVEQLFE---QLDSIPSTVVHSAGS-GYFGLLQEQDPEQIQTLIENNLSSAI 108

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++   +         +++   STA+    +    Y   K  + GL+ S   EL    +
Sbjct: 109 NVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPM 166

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           ++  V P G+AT F   +   ++             + A+  A       +
Sbjct: 167 KIIAVYPGGMATEFWETSGKSLDTS---------SFMSAEDAALMIHGALA 208

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  128 bits (324), Expect = 2e-36
 Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 22/232 (9%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIA--------DIQDELGNQVVSSIGPEKASYRH 61
           + ++ GA +G GE   + F + G  VI          +++DELG+ +             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLY---------IAQ 52

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DVR+   +EE +A    ++ ++DI+ +NAG+A  +       +  ++  I TN  G V 
Sbjct: 53  LDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVY 112

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             +     MV     G II   STA +   +G + Y  +K  +     +  ++L    +R
Sbjct: 113 MTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171

Query: 182 VNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIV-LKAKHVAEAALFLAS 231
           V  + P  V  T FS       +G   K    +  V L  + V+EA  ++++
Sbjct: 172 VTDIEPGLVGGTEFSNVRFKGDDGKAEKT--YQNTVALTPEDVSEAVWWVST 221

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  116 bits (294), Expect = 2e-32
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 15/188 (7%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
            +I GA  G+G A A+     G  ++++  +     ++   +G   A     D+ DE + 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVG---ARALPADLADELEA 57

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
           +      +E+ G LD++    G      ++ +      +  +A +    ++   +  +  
Sbjct: 58  KA----LLEEAGPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAH----LLTAAFVLKHA 108

Query: 131 VANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV 190
              K     +   +    V   G  AY  +K  L   + +A  EL + G+ +  V    V
Sbjct: 109 RFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAV 167

Query: 191 ATPFSAGT 198
           AT   A  
Sbjct: 168 ATGLWAPL 175

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  104 bits (262), Expect = 5e-27
 Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 16/201 (7%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVI-----IADIQDELGNQVVSSIGPE 55
           MS+     KV ++ GA+SG G A A+     G  VI        + D      + +  P+
Sbjct: 1   MSE---SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD------LVAAYPD 51

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +A     DV D ++++   A  + +YG +D++ +NAG    VG   +    +       +
Sbjct: 52  RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGR-TQVGAFEETTERELRDLFELH 110

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           + G     +     M      GS++  +S    +  +G  AY+ +K  L  L    A E+
Sbjct: 111 VFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEV 169

Query: 176 GKHGIRVNCVSPFGVATPFSA 196
              GI+V  V P    T    
Sbjct: 170 APFGIKVLIVEPGAFRTNLFG 190

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  101 bits (253), Expect = 2e-25
 Identities = 43/200 (21%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVI-----IADIQDELGNQVVSSIGPEKASYR- 60
             K+ +I GA+SG G  TA+  A  G  V      I          +           R 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 61  -HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              DV+ +  V+  +   I + G +D++  NAG     G        QF      N+  +
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH-MVFGPAEAFTPEQFAELYDINVLST 122

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTA---STVGGSGPHAYTISKHGLLGLVRSAASELG 176
               + A   M   K  G +I  +S++    T     P  Y  +K  +  +    A EL 
Sbjct: 123 QRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAP--YFAAKAAMDAIAVQYARELS 179

Query: 177 KHGIRVNCVSPFGVATPFSA 196
           + GI  + + P    +  + 
Sbjct: 180 RWGIETSIIVPGAFTSGTNH 199

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 96.9 bits (241), Expect = 7e-24
 Identities = 53/314 (16%), Positives = 91/314 (28%), Gaps = 95/314 (30%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKAS 58
                + + A++ G   GIG    K  + +G  V++       G++ V  +     E   
Sbjct: 6   PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVV 65

Query: 59  YRHCDVRDEKQVEETVAYAI-EKYGSLDIMYSNAGVAGPVGT------------------ 99
           +   DV D      ++A  I   +G LDI+ +NAGVAG                      
Sbjct: 66  FHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEL 125

Query: 100 -----------ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST 148
                      ++       +  +  N  G     +    ++  +     I+  +S+  +
Sbjct: 126 VKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGS 184

Query: 149 VGGSGPH-------------------------------------------AYTISKHGLL 165
           +                                                 AYT SK  L 
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA 225
              R  A+++     +VNCV P  V T  + G      G              A+  AE 
Sbjct: 245 AYTRVLANKIP--KFQVNCVCPGLVKTEMNYGI-----GN-----------YTAEEGAEH 286

Query: 226 ALFLASDESAYVSG 239
            + +A       SG
Sbjct: 287 VVRIALFPDDGPSG 300

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 93.2 bits (232), Expect = 6e-23
 Identities = 45/212 (21%), Positives = 75/212 (35%), Gaps = 25/212 (11%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFV-IIADIQDELGNQVVSSIGPEKASY 59
           MS         ++ GA  GIG    +   +      IIA  +D      + SI   +   
Sbjct: 1   MSP-----GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHV 55

Query: 60  RHCDVRDEKQVEETVAYAIEKYG--SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               V  +K ++  V+   E  G   L ++ +NAGV    GT  + + A     +  N  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 118 GSVMAVKY----------AARVMVANKIRGSIICTTS-----TASTVGGSGPH--AYTIS 160
             V+  +                  +  R ++I  +S     T +T G +     AY +S
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVAT 192
           K  +    R+ A +L    + V    P  V T
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 48/206 (23%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAE---HGAFVI-----IADIQDELGNQVVSSIGPEKASYR 60
            V +I G +SGIG   A   A        V      +             +  P      
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DVRD K V        E  G +D++  NAG+ G +G +  L        +  N+ G+V
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++     M      G ++ T S    +G      Y  SK  L GL  S A  L   G+
Sbjct: 120 RMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFV 206
            ++ +    V T F    +   E  +
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVL 204

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 86.3 bits (214), Expect = 3e-20
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 19/198 (9%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYR--HCDV 64
              +I G   G+G    K           +    ++    + +  +    ++      D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 65  RDEKQVEETVAY--AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           R+    ++ VA    + K   L+++++NAG+A     I  +   +   T+ TN    +M 
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 123 VKY----------AARVMVANKIRGSIICTTSTA---STVGGSGPHAYTISKHGLLGLVR 169
            K           A         R +II  +S           G +AY  SK  L    +
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201

Query: 170 SAASELGKHGIRVNCVSP 187
           S + +L    I    + P
Sbjct: 202 SLSVDLYPQRIMCVSLHP 219

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 82.2 bits (204), Expect = 8e-19
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 26/268 (9%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L+G+  ++MG A+   I    A+   E GA +I     + L   V     ++    +   
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
            CDV ++ ++E   A   E+ G +  +      A     VG  L+ +   F      + +
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNIS-S 123

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT---ISKHGLLGLVRSAAS 173
            S+ AV K A  +M      GSI+  T     +    P+ Y    ++K  L   V+  A+
Sbjct: 124 YSLTAVVKAARPMMTEG---GSIVTLTYLGGEL--VMPN-YNVMGVAKASLDASVKYLAA 177

Query: 174 ELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           +LGK  IRVN +S   + T  + G    N +   + + A L+      + V + A FL S
Sbjct: 178 DLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTT-TPEEVGDTAAFLFS 236

Query: 232 DESAYVSGHDLVVDGGFTAVTNVMSMLE 259
           D S  ++G +L VD GF    ++ + LE
Sbjct: 237 DMSRGITGENLHVDSGF----HITARLE 260

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 22/260 (8%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L+ K  +IMG A+   I    AK+  + GA ++    ++    ++   +  +   +A   
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
             DV+ +++V        +  G++D +Y +   A      G   +     F      + +
Sbjct: 90  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDIS-S 148

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT---ISKHGLLGLVRSAAS 173
            S+  V   A ++M      GSI+ TT        +  + Y    ++K  L   V+  A 
Sbjct: 149 YSLTIVAHEAKKLMPEG---GSIVATTYLGGEF--AVQN-YNVMGVAKASLEANVKYLAL 202

Query: 174 ELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           +LG   IRVN +S   + T  + G    N +   + + A LK  V     V + A +L S
Sbjct: 203 DLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNV-DQVEVGKTAAYLLS 261

Query: 232 DESAYVSGHDLVVDGGFTAV 251
           D S+ V+G ++ VD GF A+
Sbjct: 262 DLSSGVTGENIHVDSGFHAI 281

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 39/278 (14%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
           L GK  ++ G  +   I    A++  E GA +++         Q ++   P KA     D
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 64

Query: 64  VRDEKQVEETVAYAIEKYGSLD--------IMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           V++E+ +        E  G+ +        I +      G      D   A   + I  +
Sbjct: 65  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGI-NPFFDAPYADVSKGIHIS 123

Query: 116 LAGSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAY---TISKHGLLGLVRSA 171
            A S  ++ K    +M      GSI+      S      P  Y   T++K  L  + R  
Sbjct: 124 -AYSYASMAKALLPIMNPG---GSIVGMDFDPSRAM---PA-YNWMTVAKSALESVNRFV 175

Query: 172 ASELGKHGIRVNCVS------------PFGVATPFSAGTINDVEGFVCKVANLKGIVLKA 219
           A E GK+G+R N V+              G     +   I  +E    + A +   +  A
Sbjct: 176 AREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDA 235

Query: 220 KHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
             VA+    L SD     +G  +  DGG     +   +
Sbjct: 236 TPVAKTVCALLSDWLPATTGDIIYADGGA----HTQLL 269

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 79.1 bits (196), Expect = 1e-17
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 28/271 (10%)

Query: 1   MSKPRLQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPE 55
           M    L GK A++MG  +   +G A A    E GA V ++   + L  +      ++G  
Sbjct: 1   MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA 60

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTI 112
                  DV  +++++   A   E +G LD +      A      G  +D     +   +
Sbjct: 61  LLF--RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLAL 118

Query: 113 ATNLAGSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI---SKHGLLGLV 168
             + A S++AV + A  ++      G I+  T  AS      P  Y +   +K  L   V
Sbjct: 119 EVS-AYSLVAVARRAEPLLREG---GGIVTLTYYASEK--VVPK-YNVMAIAKAALEASV 171

Query: 169 RSAASELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAA 226
           R  A ELG  G+RVN +S   V T  +        +   V + A L+  +   + V    
Sbjct: 172 RYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNI-TQEEVGNLG 230

Query: 227 LFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           LFL S  ++ ++G  + VD G+    ++M M
Sbjct: 231 LFLLSPLASGITGEVVYVDAGY----HIMGM 257

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 46/230 (20%)

Query: 8   GKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDV 64
             VA++ G   GIG A  +         V++       G   V  +  E     +   D+
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM--- 121
            D + +     +  ++YG LD++ +NAG+A  V         Q + T+ TN  G+     
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCT 122

Query: 122 ----AVKYAARV-------------MVANKIRGSIICTTSTASTV--------------- 149
                +K   RV               + +++      T T   +               
Sbjct: 123 ELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 150 ---GGSGPHAYTISKHGLLGLVRSAASELGKH----GIRVNCVSPFGVAT 192
               G    AY ++K G+  L R  A +L +      I +N   P  V T
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT 232

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 70/270 (25%), Positives = 108/270 (40%), Gaps = 36/270 (13%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           LQGK  +I+G A+   I    AK   E GA +      D L  +V      +G       
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFV--AG 86

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
           HCDV D   ++       +K+G LD +    G +      G  +D   A F  T+  +  
Sbjct: 87  HCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLIS-V 145

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTAST-------VGGSGPHAYTISKHGLLGLVR 169
            S+ AV + A ++M      GSI+  T   +        V G       ++K  L   V+
Sbjct: 146 YSLTAVSRRAEKLMADG---GSILTLTYYGAEKVMPNYNVMG-------VAKAALEASVK 195

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAAL 227
             A +LG   IRVN +S   + T  ++G      +  +    A L+  V     V +  L
Sbjct: 196 YLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTV-TIDEVGDVGL 254

Query: 228 FLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           +  SD S  V+G     D G+    +V+ M
Sbjct: 255 YFLSDLSRSVTGEVHHADSGY----HVIGM 280

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 36/270 (13%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           ++GK  +I+G A+   +    AK     GA V +  + +    +V     S+G +     
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKL--TV 85

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
            CDV D + V+       E++GSLD +      +      G  +D  +  F  ++  +  
Sbjct: 86  PCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHIS-C 144

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTAST-------VGGSGPHAYTISKHGLLGLVR 169
            S   +   A  +M      GSI+  +   +        V G       + K  L   V+
Sbjct: 145 YSFTYIASKAEPLMTNG---GSILTLSYYGAEKVVPHYNVMG-------VCKAALEASVK 194

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAAL 227
             A +LGK  IRVN +S   V T  S+G    + +  +    + L+        V  AAL
Sbjct: 195 YLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNT-TLDDVGGAAL 253

Query: 228 FLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           +L SD     +G  + VD G+    +V+ M
Sbjct: 254 YLLSDLGRGTTGETVHVDCGY----HVVGM 279

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 76.9 bits (190), Expect = 8e-17
 Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 27/266 (10%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L+GK A+I G A+   I    AK F   GA +       +L  +V       G +     
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVV-- 76

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
            CDV  ++ ++    +  E +GSLDI+  +   A      G ++D     F   +  +  
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDIS-V 135

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT---ISKHGLLGLVRSAAS 173
            S++A+ +    +M      G+I+  +   +      PH Y    I+K  L   VR  A 
Sbjct: 136 YSLIALTRELLPLM--EGRNGAIVTLSYYGAEK--VVPH-YNVMGIAKAALESTVRYLAY 190

Query: 174 ELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
           ++ KHG R+N +S   V T  +      + +     KV      +   + V + A+FL S
Sbjct: 191 DIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPI-TIEDVGDTAVFLCS 249

Query: 232 DESAYVSGHDLVVDGGFTAVTNVMSM 257
           D +  ++G  + VD G+    ++M +
Sbjct: 250 DWARAITGEVVHVDNGY----HIMGV 271

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 27/266 (10%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L GK  +I G  S   I    AK     GA +       +  ++V    +   P      
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFT-YVGQFKDRVEKLCAEFNPAA--VL 80

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDL-DMAQFDRTIATNL 116
            CDV  ++++++      + +  LD +  +   A      G  +D      F      + 
Sbjct: 81  PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS- 139

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT---ISKHGLLGLVRSAAS 173
           A S  A+    R M+ N+   S++  T   +    + P  Y    ++K  L   VR  A 
Sbjct: 140 AYSFAALAKEGRSMMKNR-NASMVALTYIGAEK--AMPS-YNTMGVAKASLEATVRYTAL 195

Query: 174 ELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS 231
            LG+ GI+VN VS   + T  ++G      +  +   V+ LK  V     V     FL S
Sbjct: 196 ALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNV-DIMEVGNTVAFLCS 254

Query: 232 DESAYVSGHDLVVDGGFTAVTNVMSM 257
           D +  ++G  + VD G+    + +SM
Sbjct: 255 DMATGITGEVVHVDAGY----HCVSM 276

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 36/270 (13%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L+GK  +I+G A+   I    A+     GA +    + + L  +V      +        
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVY-- 61

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLA 117
             DV  E+  +       +  GSLD +  +   A      G++L+   + F+  +  +  
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEIS-V 120

Query: 118 GSVMAV-KYAARVMVANKIRGSIICTTSTAST-------VGGSGPHAYTISKHGLLGLVR 169
            S++ +      ++       S++  +   ST       V G       ++K  L   VR
Sbjct: 121 YSLIELTNTLKPLLNNG---ASVLTLSYLGSTKYMAHYNVMG-------LAKAALESAVR 170

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAAL 227
             A +LGKH IRVN +S   + T  S+G      +  +    A L+  V   + V  A +
Sbjct: 171 YLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNV-SLEEVGNAGM 229

Query: 228 FLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           +L S  S+ VSG    VD G+    +VM M
Sbjct: 230 YLLSSLSSGVSGEVHFVDAGY----HVMGM 255

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 73.7 bits (182), Expect = 9e-16
 Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 37/271 (13%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L GK  ++ G AS   I    A+     GA +      D+L  +V    + +G +     
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVL-- 64

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILD-LDMAQFDRTIATNL 116
            CDV ++  ++   A   + +   D    + G A      G  ++ +    F      + 
Sbjct: 65  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS- 123

Query: 117 AGSVMAV-KYAARVMVANKIRGSIICTTSTAST-------VGGSGPHAYTISKHGLLGLV 168
           + S +A+ K    ++       +++  +   +        V G       ++K  L   V
Sbjct: 124 SYSFVAMAKACRSMLNPG---SALLTLSYLGAERAIPNYNVMG-------LAKASLEANV 173

Query: 169 RSAASELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAA 226
           R  A+ +G  G+RVN +S   + T  ++G      +      V  ++  V   + V  +A
Sbjct: 174 RYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTV-TIEDVGNSA 232

Query: 227 LFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
            FL SD SA +SG  + VDGGF    ++ +M
Sbjct: 233 AFLCSDLSAGISGEVVHVDGGF----SIAAM 259

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 29/267 (10%)

Query: 6   LQGKVAIIMGAASG--IGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYR 60
           L GK  ++ G  S   I    AK     GA +    + D   +++    +  G E     
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVF-- 69

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDL-DMAQFDRTIATNL 116
            CDV D+ Q++   A     + SLD +  + G A      G  LD      F      + 
Sbjct: 70  PCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDIS- 128

Query: 117 AGSVMAV-KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT---ISKHGLLGLVRSAA 172
           A S  A+ K A  ++  +    S++  +   +    + P+ Y    ++K  L   VR  A
Sbjct: 129 AYSFPALAKAALPMLSDD---ASLLTLSYLGAER--AIPN-YNTMGLAKAALEASVRYLA 182

Query: 173 SELGKHGIRVNCVSPFGVATPFSAG--TINDVEGFVCKVANLKGIVLKAKHVAEAALFLA 230
             LG  G+RVN +S   + T  ++G  +   +  FV   + LK  V   + V  A  FL 
Sbjct: 183 VSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNV-TIEQVGNAGAFLL 241

Query: 231 SDESAYVSGHDLVVDGGFTAVTNVMSM 257
           SD ++ V+   + VD GF    N +  
Sbjct: 242 SDLASGVTAEVMHVDSGF----NAVVG 264

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 65/302 (21%), Positives = 102/302 (33%), Gaps = 61/302 (20%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--- 60
           L+G+ A + G A   G G A AK  A  GA V +      LG    S         R   
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 61  -----------------------HCDVRDEKQVEETVAYAI--------EKYGSLDIMYS 89
                                    D++D K+      Y I        +  G++DI+  
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 90  NAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST 148
           +      V   +L+     +    + +    V  +++   +M      GS +  +  A+ 
Sbjct: 127 SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG---GSAVTLSYLAAE 183

Query: 149 VGGSGPHAYT----ISKHGLLGLVRSAASELG-KHGIRVNCVSP--------FGVATPFS 195
                P  Y      +K  L    R+ A E G K+G+RVN +S           +     
Sbjct: 184 --RVVPG-YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE 240

Query: 196 AGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVM 255
              I+    +    A L+  +  +  V  AALFL S  +  VSG  L VD G     + M
Sbjct: 241 KSFIDYAIDYSYNNAPLRRDL-HSDDVGGAALFLLSPLARAVSGVTLYVDNGL----HAM 295

Query: 256 SM 257
             
Sbjct: 296 GQ 297

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 4  PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCD 63
          P    +  +I GA SG+G  TA+  A  GA VI+A      G     ++   +   R  D
Sbjct: 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-GQVEVRELD 70

Query: 64 VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP 96
          ++D   V        +     D++ +NAG+   
Sbjct: 71 LQDLSSVRR----FADGVSGADVLINNAGIMAV 99

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 65/296 (21%), Positives = 102/296 (34%), Gaps = 55/296 (18%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--- 60
           L+GK A I G A   G G A AK  A  GA +++      L     S    +    R   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 61  -----------------------HCDVR--------DEKQVEETVAYAIEKYGSLDIMYS 89
                                    DV+            V+E      + +GS+DI+  
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 90  NAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST 148
           +      V   +L+     +   I+ +    V  + +   +M      G+ I  T  AS 
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG---GASISLTYIASE 182

Query: 149 VGGSGPHAYTIS----KHGLLGLVRSAASELG-KHGIRVNCVSPFGVATPFSAG--TIND 201
                P  Y       K  L    R  A E G K  IRVN +S   + +  +     I+ 
Sbjct: 183 --RIIPG-YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239

Query: 202 VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
           +  +    A ++  +  A  V  AA FL S  ++ ++G  + VD G     N M +
Sbjct: 240 MIEYSYNNAPIQKTL-TADEVGNAAAFLVSPLASAITGATIYVDNGL----NSMGV 290

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 59/315 (18%), Positives = 99/315 (31%), Gaps = 74/315 (23%)

Query: 6   LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVII-------------------------A 38
           L+GK A + G A   G G A  KL    GA V++                         A
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 39  DIQDELGNQVVSSIGPEKASYR--------------HCDVRDEKQVEETVAYAI------ 78
                      +    +    +                +V   K+      + I      
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 79  --EKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI 135
                G +DI+  +      V   +L      +   ++++    V  +++   +M     
Sbjct: 127 VRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG-- 184

Query: 136 RGSIICTTSTASTVGGSGPHAYT----ISKHGLLGLVRSAASELGK-HGIRVNCVSP--- 187
            GS +  +  AS      P  Y      +K  L    R+ A E G+   +RVNC+S    
Sbjct: 185 -GSALALSYIASE--KVIPG-YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL 240

Query: 188 -----FGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
                  +        I+    +    A L+  + ++  V  AALFL S  +  V+G  L
Sbjct: 241 KSRAASAIGKAGDKTFIDLAIDYSEANAPLQKEL-ESDDVGRAALFLLSPLARAVTGATL 299

Query: 243 VVDGGFTAVTNVMSM 257
            VD G     + M  
Sbjct: 300 YVDNGL----HAMGQ 310

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 14/169 (8%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRH 61
              ++GK A+++     +G  +A L A  GA V++   + +       S+    K +   
Sbjct: 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 173

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            +  D+    E V  A         ++  AG  G    +  L  A +    +  +     
Sbjct: 174 AETADDASRAEAVKGA-------HFVF-TAGAIG----LELLPQAAWQNESSIEIVADYN 221

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRS 170
           A        +    +G           + G G     + +  +  L  S
Sbjct: 222 AQPPLGIGGIDATDKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKLFES 269

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 52.6 bits (126), Expect = 3e-08
 Identities = 53/337 (15%), Positives = 97/337 (28%), Gaps = 98/337 (29%)

Query: 8   GKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVS--------------- 50
             +  I G     G G   AK  ++    +I           + +               
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 51  -------------------SIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNA 91
                               I  E  + +  ++     +E+      +KYG ++++  + 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 92  GVAGPV-GTILDLDMAQFDRTIATNLAGSVMAV-KYAARVMVANKIRGSIICTTSTASTV 149
             A  V   +L+     +   ++ + + S++++ KY   +M       SII  T  AS  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKS-SYSLISLCKYFVNIMKPQ---SSIISLTYHASQ- 176

Query: 150 GGSGPHAYT----ISKHGLLGLVRSAASELG-KHGIRVNCVSP----------------- 187
               P  Y      +K  L    R  A  LG  + IR+N +S                  
Sbjct: 177 -KVVPG-YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT 234

Query: 188 ------------FGVATPFSAGTINDVEGFVCKVANLKGIVLKAKH-------------- 221
                                 +    E  +    N   I    ++              
Sbjct: 235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST 294

Query: 222 -VAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSM 257
            +   A FL S ES  ++G  + VD G     N+M +
Sbjct: 295 DIGSVASFLLSRESRAITGQTIYVDNGL----NIMFL 327

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 45.9 bits (108), Expect = 5e-06
 Identities = 44/291 (15%), Positives = 80/291 (27%), Gaps = 52/291 (17%)

Query: 8   GKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIGPE----------- 55
            K  +++GA+SG G A+    A   GA  +    +         + G             
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 56  ---KASYRHCDVRDEKQVEETVAYAIEKYG-SLD-IMYSNAGVAGP-------------- 96
               +   + D   +    + +     + G  +D ++YS A                   
Sbjct: 121 AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKP 180

Query: 97  -----VGTILDLDMAQFDRTIATNLAGS-------VMAVKYAARVMVANKIRGSIICTTS 144
                  T +D +     +      +         VM  +     + A +  G +     
Sbjct: 181 IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGAR 240

Query: 145 TASTVGGSGPHAYTISKHGLLGL--------VRSAASELGKHGIRVNCVSPFGVATPFSA 196
           + +         + I  HG LG          +   + L KHG   N      V T  SA
Sbjct: 241 SVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300

Query: 197 GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG 247
             I  +  ++  V  +       +   E    L  +      G    VD  
Sbjct: 301 A-IPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	262
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.94
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.94
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.91
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.91
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.91
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.9
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.9
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.9
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.9
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.89
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.89
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.88
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.86
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.86
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.86
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.86
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.86
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.86
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.85
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.85
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.83
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.83
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.8
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.8
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.79
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.77
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.76
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.76
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.74
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.72
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.72
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.72
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.7
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.7
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.52
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.42
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.15
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.77
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.76
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.69
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.66
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.62
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.62
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.57
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.52
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.51
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.5
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.49
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.49
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.42
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.41
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.4
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.39
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.38
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.36
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.35
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.31
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.31
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.22
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.21
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.17
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.17
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.16
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.14
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.06
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.06
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.05
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.04
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.04
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.03
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.02
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.01
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.99
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.96
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.96
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.95
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.9
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.89
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.89
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.87
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.87
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.84
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.84
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.82
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.79
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.79
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.79
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.76
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.73
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.7
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.67
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.66
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.57
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.53
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.5
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.5
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.49
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.47
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.46
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.46
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.45
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.41
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.41
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.36
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.31
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.27
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.26
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.25
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.24
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.24
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.2
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.19
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.18
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.16
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.16
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.15
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.13
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.11
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.1
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.1
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.07
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.07
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.07
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.06
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.05
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.04
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.01
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.97
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.97
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.96
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.94
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.92
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.91
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.91
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.88
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.86
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.86
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.85
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.8
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.79
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.78
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.76
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.75
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.74
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.73
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.72
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.71
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.7
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.65
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.64
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.6
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.6
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.59
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.59
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.58
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.58
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.56
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.55
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.54
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.54
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.51
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.49
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.47
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.46
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.43
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.42
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.4
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.36
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.34
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.33
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.27
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.26
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.23
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.22
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.22
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.19
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.19
1lnq_A	336	MTHK channels, potassium channel related protein;	96.18
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.17
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.16
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.14
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.14
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.13
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.12
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.1
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.09
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.06
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.99
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.99
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.98
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.97
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.94
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.93
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.92
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.9
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.87
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.84
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.81
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.79
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.77
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.73
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	95.67
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.66
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.62
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.62

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=6.2e-62  Score=401.32  Aligned_cols=246  Identities=34%  Similarity=0.534  Sum_probs=225.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..  .++.++++|++++++++++++++.+++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999999999888887742  578999999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|+||||||+.....++.+++.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+...+|++||
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHHHH
Confidence            99999999999876667899999999999999999999999999999999987 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH---hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE---GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+.+|+|+||.||+++|||||+|+||+++||+.........   ........|.+|+.+|+|||++++||+|+.++|+|
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iT  241 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN  241 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999999999999766533222   22233345779999999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      ||+|.||||+++
T Consensus       242 G~~i~VDGG~t~  253 (254)
T 4fn4_A          242 GDAVVVDGGLTV  253 (254)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEeCCCccc
Confidence            999999999987

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.1e-61  Score=395.64  Aligned_cols=250  Identities=29%  Similarity=0.375  Sum_probs=225.1

Q ss_pred             CC-CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHH
Q 024839            1 MS-KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         1 ~~-~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |+ +++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..  .++.++++|++++++++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            45 3589999999999999999999999999999999999999988888777642  57889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .+++|++|+||||||+. ...++.++++++|++++++|+.++++++|+++|+|++++..|+||++||..+..+.+...+|
T Consensus        81 ~~~~G~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY  159 (255)
T ss_dssp             HHTTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhH
Confidence            99999999999999986 66899999999999999999999999999999999765437999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++||+|+.+|+|++|.||+++|||||+|+||+++||+....... ..........|.+|+.+|+|||++++||+|+.++|
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999987654322 22222334568899999999999999999999999


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      +|||+|.||||++..
T Consensus       240 iTG~~i~VDGG~~Av  254 (255)
T 4g81_D          240 INGQIIYVDGGWLAV  254 (255)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CcCCEEEECCCeEee
Confidence            999999999999753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=6.4e-59  Score=386.90  Aligned_cols=242  Identities=31%  Similarity=0.439  Sum_probs=216.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++..+++|++|+++++++++++.+++|+
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-GGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999999999999999999999999988886 57889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+++.++|++++++|+.++++++|+++|+|++   .|+||+++|..+..+.+...+|++||+|
T Consensus       104 iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~~~~Y~asKaa  179 (273)
T 4fgs_A          104 IDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPAFSVYAASKAA  179 (273)
T ss_dssp             EEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCCchHHHHHHHH
Confidence            99999999986 6689999999999999999999999999999999953   5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----HhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----EGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +.+|+|++|.||+++|||||+|+||+++||+........    ....  .....|.+|+.+|||||++++||+|+.++|+
T Consensus       180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~i  259 (273)
T 4fgs_A          180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV  259 (273)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999999999999999999876553221    1111  2234588999999999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      |||+|.||||+++
T Consensus       260 TG~~i~VDGG~s~  272 (273)
T 4fgs_A          260 TGAELFVDGGSAQ  272 (273)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCCeEeECcChhh
Confidence            9999999999876

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-58  Score=378.66  Aligned_cols=244  Identities=27%  Similarity=0.362  Sum_probs=211.1

Q ss_pred             CCC-CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSK-PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~-~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |.+ ++++||++|||||++|||+++|++|+++|++|++++|+.++ ..+..++.. .++..+++|++|+++++++++   
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDG-GNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-CCEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhC-CcEEEEEccCCCHHHHHHHHH---
Confidence            443 47899999999999999999999999999999999998642 222222222 578999999999999887764   


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                        ++++|+||||||+. ...++.+++.++|++++++|+.++|+++|+++|+|++++..|+||++||..+..+.+...+|+
T Consensus        77 --~g~iDiLVNNAGi~-~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~  153 (247)
T 4hp8_A           77 --DAGFDILVNNAGII-RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYT  153 (247)
T ss_dssp             --TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             --hCCCCEEEECCCCC-CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHH
Confidence              47999999999987 568999999999999999999999999999999998765479999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +||+|+.+|+|++|.||+++|||||+|+||+++||+......+.. ........|.+|+.+|+|||.+++||+|++++|+
T Consensus       154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~i  233 (247)
T 4hp8_A          154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYV  233 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999999999999999999999999765432221 1222234688999999999999999999999999


Q ss_pred             eceEEeeCCCcccc
Q 024839          238 SGHDLVVDGGFTAV  251 (262)
Q Consensus       238 ~G~~i~~dgG~~~~  251 (262)
                      |||+|.||||++.+
T Consensus       234 TG~~i~VDGG~~Ar  247 (247)
T 4hp8_A          234 HGAILNVDGGWLAR  247 (247)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCCeEEECcccccC
Confidence            99999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.1e-57  Score=377.66  Aligned_cols=248  Identities=30%  Similarity=0.396  Sum_probs=212.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+++++||++|||||++|||+++|++|+++|++|++++|+.+..+.+.+.. ...++.++++|++++++++++++++.++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999987654332211 1257899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      +|++|+||||||+. . ....+.+.++|++.+++|+.+++.++|+++|+|+++  +|+||++||..+..+.+...+|++|
T Consensus        81 ~G~iDiLVNnAGi~-~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~as  156 (258)
T 4gkb_A           81 FGRLDGLVNNAGVN-D-GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYCAS  156 (258)
T ss_dssp             HSCCCEEEECCCCC-C-CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSSCHHHHHH
T ss_pred             hCCCCEEEECCCCC-C-CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCCchHHHHH
Confidence            99999999999986 3 344578999999999999999999999999999765  5999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-----hHhHHHhhhccc-CCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-----VEGFVCKVANLK-GIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+|+.+|+|++|.||+++|||||+|+||+++||+.......     ..........|. +|+.+|+|||++++||+|+.+
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a  236 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRA  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999998654221     111112223466 589999999999999999999


Q ss_pred             CceeceEEeeCCCcccccC
Q 024839          235 AYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~  253 (262)
                      +|+|||+|.||||+|...+
T Consensus       237 ~~iTG~~i~VDGG~T~l~~  255 (258)
T 4gkb_A          237 SHTTGEWLFVDGGYTHLDR  255 (258)
T ss_dssp             TTCCSCEEEESTTTTTSCT
T ss_pred             cCccCCeEEECCCcchhhh
Confidence            9999999999999986544

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.1e-57  Score=368.84  Aligned_cols=232  Identities=31%  Similarity=0.434  Sum_probs=203.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++.    ...++..+++|++|+++++++++    +++++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iD   80 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP----RHPRIRREELDITDSQRLQRLFE----ALPRLD   80 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC----CCTTEEEEECCTTCHHHHHHHHH----HCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh----hcCCeEEEEecCCCHHHHHHHHH----hcCCCC
Confidence            4799999999999999999999999999999999998765432    23578899999999999887765    579999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||+.   .++.+++.++|++++++|+.++++++|+++|+|+++  .|+||++||..+..+.+...+|++||+|+.
T Consensus        81 iLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaav~  155 (242)
T 4b79_A           81 VLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSADRPAYSASKGAIV  155 (242)
T ss_dssp             EEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCCCHHHHHHHHHHH
Confidence            999999975   467789999999999999999999999999999764  599999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +|+|+||.||+++|||||+|+||+++|||......... ........|.+|+.+|+|||++++||+|+.++|+|||+|.|
T Consensus       156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~V  235 (242)
T 4b79_A          156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAV  235 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEE
Confidence            99999999999999999999999999999876544322 22223346899999999999999999999999999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      ||||++
T Consensus       236 DGG~la  241 (242)
T 4b79_A          236 DGGYLC  241 (242)
T ss_dssp             STTGGG
T ss_pred             CccHhh
Confidence            999975

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.1e-55  Score=362.67  Aligned_cols=234  Identities=25%  Similarity=0.389  Sum_probs=211.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|+||||||++|||+++|++|+++|++|++++|+++.++++.++.  .++.++++|++|+++++++++++.++++++|+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999999998887776654  468899999999999999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      |||||+. ...++.+++.++|++++++|+.+++.++|++.|+|+++  +|+||++||..+..+.+...+|++||+|+.+|
T Consensus        80 VNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~~~~Y~asKaal~~l  156 (247)
T 3ged_A           80 VNNACRG-SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAKGGIVAL  156 (247)
T ss_dssp             EECCCCC-CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence            9999986 66899999999999999999999999999999999875  49999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      +|+||.||++ |||||+|+||+++|++......+.     ....|.+|+.+|+|||++++||+++  +|+|||+|.||||
T Consensus       157 tk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~-----~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG  228 (247)
T 3ged_A          157 THALAMSLGP-DVLVNCIAPGWINVTEQQEFTQED-----CAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGG  228 (247)
T ss_dssp             HHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHH-----HHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTT
T ss_pred             HHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHH-----HhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcC
Confidence            9999999997 999999999999999876543321     1235889999999999999999984  6999999999999


Q ss_pred             cccccCc
Q 024839          248 FTAVTNV  254 (262)
Q Consensus       248 ~~~~~~~  254 (262)
                      ++.+...
T Consensus       229 ~s~r~~~  235 (247)
T 3ged_A          229 MSKRMIY  235 (247)
T ss_dssp             GGGCCCC
T ss_pred             HHHhCcc
Confidence            9987643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=8.2e-56  Score=367.42  Aligned_cols=238  Identities=24%  Similarity=0.306  Sum_probs=208.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.      +  .+..++++|++++++++++++++.+++|+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------L--PEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------S--CTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------C--CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            488999999999999999999999999999999999986532      1  23457899999999999999999999999


Q ss_pred             cCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-CCccchhhh
Q 024839           84 LDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISK  161 (262)
Q Consensus        84 ~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK  161 (262)
                      +|+||||||+... ..++.++++++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+ ....|++||
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~~Y~asK  157 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTTAYAAAK  157 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCHHHHHHH
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccHHHHHHH
Confidence            9999999997533 35789999999999999999999999999999999887 89999999999998876 578899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----------chHhHHH--hhhcccCCCCCHHHHHHHHHH
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----------DVEGFVC--KVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~va~~~~~  228 (262)
                      +|+.+|+|+|+.||+++|||||+|+||+++||+......           .......  ....|.+|+.+|||||++++|
T Consensus       158 aal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~f  237 (261)
T 4h15_A          158 AALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAF  237 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999997543211           1111111  123588999999999999999


Q ss_pred             HcCCCCCceeceEEeeCCCccc
Q 024839          229 LASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+|+.++|+|||+|.||||+..
T Consensus       238 LaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          238 LASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTCSC
T ss_pred             HhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999843

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.4e-55  Score=362.85  Aligned_cols=245  Identities=22%  Similarity=0.233  Sum_probs=216.5

Q ss_pred             CCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |++++||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+   ...++.++++|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999875  9999999999999999999999988777666555   3357899999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .+++|++|++|||||+..   ...++.+.++++|...+++|+.+++.+++.+.+++.  + .|+||++||..+..+.+..
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~-~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--E-GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--T-CEEEEEEECGGGTSCCTTT
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--c-CCEEEEEeccccccCcccc
Confidence            999999999999999753   234567889999999999999999999999888663  2 6899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      .+|++||+|+.+|+|+|+.||+++|||||+|+||+++|++......... ........|.+|+.+|||||++++||+|+.
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~  237 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999999876543221 122233468899999999999999999999


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+|||+|.||||++.
T Consensus       238 a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          238 SSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCCEEEECcCHHh
Confidence            99999999999999986

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-52  Score=351.11  Aligned_cols=254  Identities=35%  Similarity=0.524  Sum_probs=223.6

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |+|.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .++.++++|++++++++++++++.
T Consensus         1 M~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            1 MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            677889999999999999999999999999999999999999988888877743  578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y  157 (262)
                      ++++++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+. .+.+...+|
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y  159 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPY  159 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhH
Confidence            99999999999999875667888999999999999999999999999999999887 7999999999988 677888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....   ............|.+++.+|+|+|++++||+++.+
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a  239 (280)
T 3tox_A          160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGA  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999865421   12222222334577889999999999999999999


Q ss_pred             CceeceEEeeCCCcccccCcc
Q 024839          235 AYVSGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~~~  255 (262)
                      .++||++|.+|||+++.....
T Consensus       240 ~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          240 SFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             TTCCSCEEEESTTGGGCC---
T ss_pred             cCCcCcEEEECCCcccccccc
Confidence            999999999999998866543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.2e-52  Score=345.70  Aligned_cols=246  Identities=29%  Similarity=0.462  Sum_probs=222.4

Q ss_pred             CC-CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            1 MS-KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         1 ~~-~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |+ ++++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++. .+..++++|++|+++++++++++.+
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHH
Confidence            44 457899999999999999999999999999999999999988888777775 4578899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++
T Consensus        80 ~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  157 (248)
T 3op4_A           80 EFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAA  157 (248)
T ss_dssp             HHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHH
Confidence            999999999999987 457888999999999999999999999999999998877 799999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......+... ......|.+++.+|+|+++++.||+++++.++||
T Consensus       158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG  236 (248)
T 3op4_A          158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRT-ATLAQVPAGRLGDPREIASAVAFLASPEAAYITG  236 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHH-HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHH-HHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccC
Confidence            999999999999999999999999999999999998765433222 2223457789999999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+++
T Consensus       237 ~~i~vdgG~~~  247 (248)
T 3op4_A          237 ETLHVNGGMYM  247 (248)
T ss_dssp             CEEEESTTSSC
T ss_pred             cEEEECCCeec
Confidence            99999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-52  Score=346.25  Aligned_cols=253  Identities=27%  Similarity=0.403  Sum_probs=225.0

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   .++.++++|++++++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999999999888877766632   478999999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y  157 (262)
                      ++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+. .+.+....|
T Consensus        84 ~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHSCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChhh
Confidence            9999999999999987 557888999999999999999999999999999999877 7999999999986 777889999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.....++.... .....|.+++.+|+|++++++||+++++.++
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  240 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIAS-MARSIPAGALGTPEDIGHLAAFLATKEAGYI  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHH-HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            999999999999999999999999999999999999865543322222 2223477889999999999999999999999


Q ss_pred             eceEEeeCCCcccccCcccc
Q 024839          238 SGHDLVVDGGFTAVTNVMSM  257 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~~~~~  257 (262)
                      ||++|.+|||+++......+
T Consensus       241 tG~~i~vdGG~~~~~~~~~~  260 (262)
T 3pk0_A          241 TGQAIAVDGGQVLPESLDAI  260 (262)
T ss_dssp             CSCEEEESTTTTCCSSGGGC
T ss_pred             cCCEEEECCCeecCcchhhc
Confidence            99999999999886555444

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.5e-52  Score=347.75  Aligned_cols=248  Identities=26%  Similarity=0.299  Sum_probs=219.6

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |+++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.    ..++.++++|++|++++++++++
T Consensus         1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            67788999999999999999999999999999999999999888777766652    23589999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +.++++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+
T Consensus        81 ~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  158 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVA  158 (265)
T ss_dssp             HHHHHCSCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchh
Confidence            999999999999999986 567888999999999999999999999999999998876 899999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-------chHhHHH--h--hhcccCCCCCHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-------DVEGFVC--K--VANLKGIVLKAKHVAEA  225 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~~~--~--~~~~~~~~~~~~~va~~  225 (262)
                      |++||+|+++|+++++.|++++||+||+|+||+++||+......       .......  .  ...|.+++.+|+|+|++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  238 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA  238 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999987543211       1111111  1  11578999999999999


Q ss_pred             HHHHcCCCCCceeceEEeeCCCccc
Q 024839          226 ALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++||+++.+.++||++|.+|||+++
T Consensus       239 v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          239 ILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHhCchhcCcCCCEEEECCCCcC
Confidence            9999999999999999999999976

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4e-52  Score=344.00  Aligned_cols=245  Identities=31%  Similarity=0.434  Sum_probs=222.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..++..++++ .++.++++|++|+++++++++++.+++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            45789999999999999999999999999999999999998888888775 57899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++..|+||++||..+..+.+...+|++||+|
T Consensus        81 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  159 (247)
T 3rwb_A           81 IDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGG  159 (247)
T ss_dssp             CSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHH
Confidence            99999999987 56788899999999999999999999999999999876546899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +++|+++++.|++++||+||+|+||+++|++.................|.++..+|+|+++++.||+++++.++||++|.
T Consensus       160 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~  239 (247)
T 3rwb_A          160 VIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLN  239 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            99999999999999999999999999999987655443333333333577899999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||++.
T Consensus       240 vdGG~~~  246 (247)
T 3rwb_A          240 VDAGMVR  246 (247)
T ss_dssp             ESTTSSC
T ss_pred             ECCCccC
Confidence            9999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-51  Score=347.58  Aligned_cols=247  Identities=33%  Similarity=0.381  Sum_probs=217.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .++.++++|++|+++++++++++.++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999988888877753  57889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC--CCCCCccch
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV--GGSGPHAYT  158 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~--~~~~~~~Y~  158 (262)
                      ++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..  +.+...+|+
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~~~Y~  181 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYT  181 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCchHHH
Confidence            999999999999875557888999999999999999999999999999998877 79999999999877  667889999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH------HHhhhccc--CCCCCHHHHHHHHHHHc
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF------VCKVANLK--GIVLKAKHVAEAALFLA  230 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~va~~~~~l~  230 (262)
                      +||+|+++|+++++.|++++||+||+|+||+++|++...........      ......|.  +++.+|+|+|++++||+
T Consensus       182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~  261 (283)
T 3v8b_A          182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999976543221110      01112244  88999999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+.++||++|.+|||+++
T Consensus       262 s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          262 SERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             SGGGTTCCSCEEEESTTHHH
T ss_pred             CccccCCcCCEEEECcCccc
Confidence            99999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=7.3e-52  Score=344.15  Aligned_cols=245  Identities=31%  Similarity=0.416  Sum_probs=219.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999988877766653  257899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+.. ..++ +.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++|
T Consensus        87 ~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           87 FGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHHHHH
Confidence            999999999999874 4566 899999999999999999999999999999877 7999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|++++++||+++.+.++||+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~  243 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQ  243 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCC
Confidence            99999999999999999999999999999999986543222222222334577899999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||++.
T Consensus       244 ~i~vdgG~~~  253 (256)
T 3gaf_A          244 VLTVSGGGVQ  253 (256)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECCCccc
Confidence            9999999865

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.3e-51  Score=343.24  Aligned_cols=248  Identities=32%  Similarity=0.428  Sum_probs=220.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ||.++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++. .++.++++|++++++++++++++.+++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-PAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3457899999999999999999999999999999999999998888888775 568899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..|+||++||..+..+.+...+|++||
T Consensus        81 g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (259)
T 4e6p_A           81 GGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK  159 (259)
T ss_dssp             SSCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence            9999999999986 457888999999999999999999999999999998765468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC----------ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT----------INDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      +++++|+++++.|++++||+||+|+||+++||+....          .............|.+++.+|+|++++++||++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s  239 (259)
T 4e6p_A          160 AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999975432          111112222234577999999999999999999


Q ss_pred             CCCCceeceEEeeCCCcccc
Q 024839          232 DESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +.+.++||++|.+|||++++
T Consensus       240 ~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          240 AESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             CccCCCCCCEEEECcChhcC
Confidence            99999999999999998763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.9e-51  Score=344.39  Aligned_cols=248  Identities=32%  Similarity=0.410  Sum_probs=215.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC----------------chhHHHHHhhhC--CCceEEEEecC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ----------------DELGNQVVSSIG--PEKASYRHCDV   64 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~----------------~~~~~~~~~~~~--~~~~~~~~~D~   64 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++.  ..++.++++|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            456889999999999999999999999999999999887                555555555543  25789999999


Q ss_pred             CCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           65 RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        65 ~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      +|+++++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++..|+||++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999999999999999999999999998755445889999999999999999999999999999987654689999999


Q ss_pred             CCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cchHhHH----Hhh
Q 024839          145 TASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDVEGFV----CKV  209 (262)
Q Consensus       145 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~~----~~~  209 (262)
                      ..+..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++.....           .......    ...
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             hhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999875311           0000000    111


Q ss_pred             hcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          210 ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       210 ~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ..| +++.+|+|+|++++||+++.+.|+|||+|.+|||++++
T Consensus       246 ~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          246 TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            234 78899999999999999999999999999999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-51  Score=341.40  Aligned_cols=243  Identities=29%  Similarity=0.453  Sum_probs=218.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++.++++|++|+++++++++++.++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-RGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999999998888887775 5788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           83 SLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        83 ~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      ++|+||||||+... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTK  163 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHHHH
Confidence            99999999998633 55678899999999999999999999999999999887 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+||+|+||+++||+.................|.+++.+|+|+|++++||+++.+.++||++
T Consensus       164 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~  243 (271)
T 3tzq_B          164 AAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV  243 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCE
Confidence            99999999999999999999999999999999876433322222233345778999999999999999999999999999


Q ss_pred             EeeCCC
Q 024839          242 LVVDGG  247 (262)
Q Consensus       242 i~~dgG  247 (262)
                      |.+|||
T Consensus       244 i~vdGG  249 (271)
T 3tzq_B          244 IAADSG  249 (271)
T ss_dssp             EEESTT
T ss_pred             EEECCC
Confidence            999999

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.4e-51  Score=344.20  Aligned_cols=245  Identities=26%  Similarity=0.441  Sum_probs=211.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++|+++++++++++.+++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-KDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999999999998888877775 578999999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.+...+|++||
T Consensus       100 g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A          100 EGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             TSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhHHHHH
Confidence            9999999999986 456788899999999999999999999999999998877 79999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++.....+.... ......|.+++.+|+|+|++++||+++++.++||++
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~  256 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKE-AIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQT  256 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHH-HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHH-HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence            9999999999999999999999999999999987655333222 222345779999999999999999999999999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.+|||+++
T Consensus       257 i~vdGG~~~  265 (266)
T 3grp_A          257 LHINGGMAM  265 (266)
T ss_dssp             EEESTTC--
T ss_pred             EEECCCeee
Confidence            999999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=7.5e-51  Score=338.41  Aligned_cols=248  Identities=24%  Similarity=0.294  Sum_probs=220.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++..  .++.++++|++|+++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999986 8888877777666632  57899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||+|
T Consensus        83 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            99999999976 567888999999999999999999999999999999877 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++|+++++.|++++||+||+|+||+++|++........ .........|.+++.+|+|++++++||+++.+.++||++|
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i  240 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI  240 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            999999999999999999999999999999876553321 1122223457799999999999999999999999999999


Q ss_pred             eeCCCcccccCccc
Q 024839          243 VVDGGFTAVTNVMS  256 (262)
Q Consensus       243 ~~dgG~~~~~~~~~  256 (262)
                      .+|||+++....+.
T Consensus       241 ~vdGG~~~~~~~~~  254 (258)
T 3oid_A          241 IVDGGRSLLVLEHH  254 (258)
T ss_dssp             EESTTGGGBCC---
T ss_pred             EECCCccCCCCCCC
Confidence            99999988665543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-51  Score=344.46  Aligned_cols=246  Identities=32%  Similarity=0.430  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.   ..++.++++|++|+++++++++++.++
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888877766652   357899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..|+||++||..+..+.+....|++|
T Consensus        96 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (266)
T 4egf_A           96 FGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTS  174 (266)
T ss_dssp             HTSCSEEEEECCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHH
Confidence            99999999999987 45788899999999999999999999999999999876546899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|++++++||+++.+.++||
T Consensus       175 K~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG  254 (266)
T 4egf_A          175 KAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMING  254 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence            99999999999999999999999999999999985433211 11112223457789999999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+++
T Consensus       255 ~~i~vdGG~~~  265 (266)
T 4egf_A          255 VDIPVDGGYTM  265 (266)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECCCccC
Confidence            99999999976

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.4e-50  Score=343.62  Aligned_cols=248  Identities=33%  Similarity=0.442  Sum_probs=214.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC------------chhHHHHHhhhC--CCceEEEEecCCCHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ------------DELGNQVVSSIG--PEKASYRHCDVRDEK   68 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~   68 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.  ..++.++++|++|++
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            446889999999999999999999999999999999887            455555555442  257899999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      +++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|.+++..|+||++||..+.
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            99999999999999999999999987554458899999999999999999999999999999876547899999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cchHhH----HHhhhccc
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDVEGF----VCKVANLK  213 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~----~~~~~~~~  213 (262)
                      .+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++.....           ......    ......| 
T Consensus       183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  261 (299)
T 3t7c_A          183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-  261 (299)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-
Confidence            999999999999999999999999999999999999999999999875321           001110    0111223 


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +++.+|+|+|++++||+++++.++||++|.+|||++++
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            77889999999999999999999999999999999763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.5e-51  Score=340.69  Aligned_cols=245  Identities=29%  Similarity=0.387  Sum_probs=217.8

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+|.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++|+++++++++++.++
T Consensus         1 M~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            1 MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-PRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             ---CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHH
Confidence            67778999999999999999999999999999999999999998888877774 57899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..+.+....|++|
T Consensus        80 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  155 (255)
T 4eso_A           80 LGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHPGMSVYSAS  155 (255)
T ss_dssp             HSSEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCTTBHHHHHH
T ss_pred             hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCCCchHHHHH
Confidence            99999999999986 4578889999999999999999999999999998843   5899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cchHh---HHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDVEG---FVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+|+++|+++++.|++++||+||+|+||+++||+.....  .....   .......|.+++.+|+|+|++++||+++ +.
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~  234 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-AT  234 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CT
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-Cc
Confidence            999999999999999999999999999999999875431  11111   1122345789999999999999999998 88


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      ++||+.|.+|||++.+
T Consensus       235 ~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          235 FTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             TCCSCEEEESTTTTTT
T ss_pred             CccCCEEEECCCcccc
Confidence            9999999999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-51  Score=345.16  Aligned_cols=248  Identities=35%  Similarity=0.543  Sum_probs=217.4

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++.++++|++|+++++++++++.++
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG-CGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CcceEEEecCCCHHHHHHHHHHHHHH
Confidence            44557899999999999999999999999999999999999998888887774 57889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+...+|++|
T Consensus       101 ~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          101 FGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             HSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHH
Confidence            99999999999987 457888999999999999999999999999999999877 8999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----chHh--HHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----DVEG--FVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+|++.|+++++.|++++||+||+|+||+++||+......    ....  .......|.+++.+|+|+|++++||+++++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a  258 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA  258 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence            9999999999999999999999999999999997532211    0000  011113466889999999999999999999


Q ss_pred             CceeceEEeeCCCcccc
Q 024839          235 AYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~  251 (262)
                      .++||++|.+|||+++.
T Consensus       259 ~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          259 SMITGTTQIADGGTIAA  275 (277)
T ss_dssp             TTCCSCEEEESTTGGGS
T ss_pred             CCccCcEEEECCcchhc
Confidence            99999999999998763

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-50  Score=340.74  Aligned_cols=248  Identities=30%  Similarity=0.443  Sum_probs=213.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC------------chhHHHHHhhhC--CCceEEEEecCCCH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ------------DELGNQVVSSIG--PEKASYRHCDVRDE   67 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~   67 (262)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.  ..++.++++|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4667899999999999999999999999999999999997            344444444332  25789999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      ++++++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhh
Confidence            999999999999999999999999986 457888999999999999999999999999999998877 799999999999


Q ss_pred             cCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cch---HhHHHhhhccc
Q 024839          148 TVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDV---EGFVCKVANLK  213 (262)
Q Consensus       148 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~---~~~~~~~~~~~  213 (262)
                      ..+.+....|++||+|+++|+++++.|++++||+||+|+||+++||+.....           ...   ...........
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY  241 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence            9999999999999999999999999999999999999999999999875310           001   11111111223


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +++.+|+|+|++++||+++.+.++||++|.+|||++++
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            78899999999999999999999999999999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-50  Score=339.56  Aligned_cols=248  Identities=35%  Similarity=0.527  Sum_probs=221.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++++|++|+++++++++++.++++
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-SKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456889999999999999999999999999999999999998888877765 5788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++||+
T Consensus       101 ~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  178 (277)
T 4dqx_A          101 RVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKG  178 (277)
T ss_dssp             CCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHHHHH
Confidence            999999999986 457888999999999999999999999999999998876 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      |+++|+++++.|++++||+||+|+||+++|++.....   ......  ......|.+++.+|+|+|++++||+++.+.++
T Consensus       179 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~i  258 (277)
T 4dqx_A          179 AISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFA  258 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCC
Confidence            9999999999999999999999999999999732211   111111  12234577889999999999999999999999


Q ss_pred             eceEEeeCCCcccccC
Q 024839          238 SGHDLVVDGGFTAVTN  253 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~  253 (262)
                      ||++|.+|||+++...
T Consensus       259 tG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          259 TGSILTVDGGSSIGNH  274 (277)
T ss_dssp             CSCEEEESSSSSSCCT
T ss_pred             cCCEEEECCchhhhhc
Confidence            9999999999987543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-50  Score=343.05  Aligned_cols=247  Identities=27%  Similarity=0.396  Sum_probs=221.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   .++.++++|++|+++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999999988888777754   4788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccch
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYT  158 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~  158 (262)
                      +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+. .+.+....|+
T Consensus       116 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~  193 (293)
T 3rih_A          116 AFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYG  193 (293)
T ss_dssp             HHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHH
Confidence            999999999999987 557888999999999999999999999999999998877 7999999999986 7788899999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +||+++++|+++++.|++++||+||+|+||+++|++......+... ......|.+++.+|+|++++++||+++.+.++|
T Consensus       194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~it  272 (293)
T 3rih_A          194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYIS-GMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT  272 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHH-HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHH-HHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999999976544322211 122235778899999999999999999999999


Q ss_pred             ceEEeeCCCccccc
Q 024839          239 GHDLVVDGGFTAVT  252 (262)
Q Consensus       239 G~~i~~dgG~~~~~  252 (262)
                      |++|.+|||+++..
T Consensus       273 G~~i~vdGG~~~~~  286 (293)
T 3rih_A          273 GQAIVVDGGQVLPE  286 (293)
T ss_dssp             SCEEEESTTTTCBS
T ss_pred             CCEEEECCCccCCC
Confidence            99999999998854

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.3e-50  Score=336.86  Aligned_cols=247  Identities=27%  Similarity=0.372  Sum_probs=217.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .++.++++|++++++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999999988888877754  578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|.+++..|+||++||..+..+.+....|++||
T Consensus        82 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           82 GRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            9999999999986 557888999999999999999999999999999995544379999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHC-CCCcEEEEEeCCCccCCCCCCCcc--chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          162 HGLLGLVRSAASELG-KHGIRVNCVSPFGVATPFSAGTIN--DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       162 ~a~~~~~~~la~e~~-~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+++|+++++.|++ ++||+||+|+||+++|++......  ...........|.+++.+|+|+|++++||+++++.++|
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999998 779999999999999997544311  11111112234778999999999999999999999999


Q ss_pred             ceEEeeCCCcccc
Q 024839          239 GHDLVVDGGFTAV  251 (262)
Q Consensus       239 G~~i~~dgG~~~~  251 (262)
                      |++|.+|||+++.
T Consensus       241 G~~i~vdGG~~~~  253 (257)
T 3imf_A          241 GTCMTMDGGQHLH  253 (257)
T ss_dssp             SCEEEESTTTTSC
T ss_pred             CCEEEECCCcccC
Confidence            9999999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.6e-51  Score=344.71  Aligned_cols=245  Identities=28%  Similarity=0.366  Sum_probs=220.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ..++.++++|++|+++++++++++.+++
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            46889999999999999999999999999999999999988887777663  2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.+...+|++||
T Consensus       102 g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          102 IDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             CCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHHHHH
Confidence            9999999999986 557888999999999999999999999999999999877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|++++++||+++.+.++||+
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence            9999999999999999999999999999999986543211 112222334578999999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||+++
T Consensus       260 ~i~vdGG~~~  269 (271)
T 4ibo_A          260 IIYVDGGMLS  269 (271)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCeec
Confidence            9999999876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.5e-51  Score=343.45  Aligned_cols=246  Identities=28%  Similarity=0.438  Sum_probs=220.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++..  .++.++.+|++|+++++++++++.++
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998888777666532  46889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++|
T Consensus       103 ~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  180 (270)
T 3ftp_A          103 FGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAA  180 (270)
T ss_dssp             HSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchhHHHH
Confidence            99999999999986 456788899999999999999999999999999998877 7999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|++++||+||+|+||+++|++......... .......|.+++.+|+|+|++++||+++.+.++||+
T Consensus       181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~  259 (270)
T 3ftp_A          181 KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQ-TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  259 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHH-HHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHH-HHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCc
Confidence            9999999999999999999999999999999998655433222 222334577899999999999999999999999999


Q ss_pred             EEeeCCCcccc
Q 024839          241 DLVVDGGFTAV  251 (262)
Q Consensus       241 ~i~~dgG~~~~  251 (262)
                      +|.+|||+.++
T Consensus       260 ~i~vdGG~~~s  270 (270)
T 3ftp_A          260 TLHVNGGMFMS  270 (270)
T ss_dssp             EEEESTTSSCC
T ss_pred             EEEECCCcccC
Confidence            99999998763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.1e-51  Score=341.96  Aligned_cols=249  Identities=26%  Similarity=0.323  Sum_probs=221.0

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++..     .++.++++|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            34578899999999999999999999999999999999999888777766632     2788999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.+...+
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCCCCChh
Confidence            9999999999999999855667888999999999999999999999999999999877 899999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+++++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|++++++||+++.+.
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  243 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS  243 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            999999999999999999999999999999999999986543111 1112222345778999999999999999999999


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      ++||+.|.+|||+++.
T Consensus       244 ~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          244 FVTGQVINVDGGQMLR  259 (281)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCCCCEEEeCCChhcc
Confidence            9999999999999886

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4e-51  Score=342.06  Aligned_cols=245  Identities=31%  Similarity=0.467  Sum_probs=215.4

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |+.+++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+++.  ..++.++++|++|+++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5566789999999999999999999999999999999888 4555555555442  257889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|
T Consensus       101 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  178 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANY  178 (269)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhH
Confidence            99999999999999987 457888999999999999999999999999999998877 7999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC-CCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD-ESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~  236 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++......    .......|.+++.+|+|+|++++||+++ .+.+
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~  254 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA----EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAY  254 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH----HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH----HHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCC
Confidence            9999999999999999999999999999999999998653221    2222345778999999999999999998 6789


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      +||++|.+|||++++
T Consensus       255 itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          255 ITGQVINIDGGLVMA  269 (269)
T ss_dssp             CCSCEEEESTTSCCC
T ss_pred             CcCCEEEECCCeecC
Confidence            999999999999763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-51  Score=340.67  Aligned_cols=246  Identities=24%  Similarity=0.285  Sum_probs=218.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988887777663  257899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|++++  |+||++||..+..+.+....|++|
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~as  163 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMA  163 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCCTTCHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCCCccHHHHHH
Confidence            999999999999865667889999999999999999999999999999998754  899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      |+|+++|+++++.|++++||+||+|+||+++|++......          +..........|.+++.+|+|+|++++||+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  243 (264)
T 3ucx_A          164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999997643311          111111223457789999999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+.++||++|.+|||+.+
T Consensus       244 s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          244 SDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-50  Score=340.82  Aligned_cols=247  Identities=30%  Similarity=0.446  Sum_probs=211.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.++.+|++|||||++|||+++|++|+++|++|++++| +.+..++..+++.   ..++.++++|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999 5555666555542   3578999999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+...+|+
T Consensus       100 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHTSSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchHHH
Confidence            9999999999999986 557888999999999999999999999999999998877 79999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-----------hHHHhhhcccCCCCCHHHHHHHHH
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-----------GFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.........           ........|.+++.+|+|+|++++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~  257 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL  257 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            999999999999999999999999999999999998765422110           001122347789999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCcccc
Q 024839          228 FLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ||+++++.++||++|.+|||++++
T Consensus       258 ~L~s~~a~~itG~~i~vdGG~~~q  281 (281)
T 3v2h_A          258 YLAGDDAAQITGTHVSMDGGWTAQ  281 (281)
T ss_dssp             HHHSSGGGGCCSCEEEESTTGGGC
T ss_pred             HHcCCCcCCCCCcEEEECCCccCC
Confidence            999999999999999999999763

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.2e-50  Score=340.40  Aligned_cols=244  Identities=33%  Similarity=0.462  Sum_probs=216.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .++.++++|++|+++++++++++.+++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999999888877776632  578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--CCCccchh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPHAYTI  159 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~  159 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..++||++||..+..+.  +....|++
T Consensus       108 g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a  186 (276)
T 3r1i_A          108 GGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT  186 (276)
T ss_dssp             SCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence            9999999999987 45788899999999999999999999999999999887635899999999887654  35688999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|++.|+++++.|++++||+||+|+||+++|++........  .......|.+++.+|+|+|++++||+++.+.++||
T Consensus       187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG  264 (276)
T 3r1i_A          187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYH--ALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTG  264 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGH--HHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHH--HHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999999999976543221  12223347789999999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+++
T Consensus       265 ~~i~vdGG~~~  275 (276)
T 3r1i_A          265 SDIVIDGGYTC  275 (276)
T ss_dssp             CEEEESTTTTC
T ss_pred             cEEEECcCccC
Confidence            99999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-50  Score=341.31  Aligned_cols=249  Identities=24%  Similarity=0.329  Sum_probs=197.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |.++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++.  ..++.++++|++|+++++++++++.+
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999986 5666666655553  25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCC-CCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVA-GPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|+||||||+. ....++.+.+.++|++++++|+.+++.++++++|.|++++  ..|+||++||..+..+.+...+
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  183 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD  183 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence            999999999999984 2456888999999999999999999999999999998743  1579999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|+|++++||+++.+.+
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~  263 (280)
T 4da9_A          184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGF  263 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999999766543333222222457789999999999999999999999


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      +||++|.+|||+++.
T Consensus       264 itG~~i~vdGG~~~~  278 (280)
T 4da9_A          264 ATGSVIQADGGLSIG  278 (280)
T ss_dssp             GTTCEEEESTTCC--
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999999863

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2e-50  Score=339.15  Aligned_cols=246  Identities=33%  Similarity=0.409  Sum_probs=212.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-------------CchhHHHHHhhhC--CCceEEEEecCCCH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-------------QDELGNQVVSSIG--PEKASYRHCDVRDE   67 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~--~~~~~~~~~D~~~~   67 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.  ..++.++++|++|+
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF   85 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            34688999999999999999999999999999999988             4555555555442  35789999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      ++++++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..|+||++||..+
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            999999999999999999999999987 4578889999999999999999999999999999988654689999999999


Q ss_pred             cCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--------HhH--HHhhhcccCCCC
Q 024839          148 TVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--------EGF--VCKVANLKGIVL  217 (262)
Q Consensus       148 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--------~~~--~~~~~~~~~~~~  217 (262)
                      ..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++........        ...  ......| .++.
T Consensus       165 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~  243 (277)
T 3tsc_A          165 MKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWVA  243 (277)
T ss_dssp             TSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CSCB
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CCCC
Confidence            9999999999999999999999999999999999999999999999865311000        000  0011123 3688


Q ss_pred             CHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +|+|+|++++||+++++.++||+.|.+|||+++
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            999999999999999999999999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-50  Score=338.51  Aligned_cols=246  Identities=35%  Similarity=0.479  Sum_probs=212.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-------------CchhHHHHHhhhCC--CceEEEEecCCCH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-------------QDELGNQVVSSIGP--EKASYRHCDVRDE   67 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~~--~~~~~~~~D~~~~   67 (262)
                      |.+++||++|||||++|||+++|++|+++|++|++++|             +.+.++++.+.+..  .++.++++|++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            45689999999999999999999999999999999988             55666666555532  5788999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      ++++++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++..|+||++||..+
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            999999999999999999999999987 4578889999999999999999999999999999987654689999999999


Q ss_pred             cCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-----hHhHH----HhhhcccCCCCC
Q 024839          148 TVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-----VEGFV----CKVANLKGIVLK  218 (262)
Q Consensus       148 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-----~~~~~----~~~~~~~~~~~~  218 (262)
                      ..+.+....|++||+|+++|+++++.|++++||+||+|+||+++||+.......     .....    .....| .++.+
T Consensus       169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~  247 (280)
T 3pgx_A          169 LKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP-NGFMT  247 (280)
T ss_dssp             TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC-SSCBC
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC-CCCCC
Confidence            999999999999999999999999999999999999999999999986531100     00000    011123 36889


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+|+|++++||+++++.++||++|.+|||++.
T Consensus       248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             HHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999999999864

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=3.4e-50  Score=332.21  Aligned_cols=241  Identities=28%  Similarity=0.447  Sum_probs=214.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+|++|||||++|||+++|++|+++|++|++++++ .+..+++.+++.  ..++.++++|++|+++++++++++.+++++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999988774 455555555542  257889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++||+|
T Consensus        83 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           83 LDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             CCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            99999999987 457788999999999999999999999999999998877 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +++|+++++.|++++||+||+|+||+++|++.....+..... .....|.+++.+|+|++++++||+++++.++||++|+
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~  239 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQ-MLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIH  239 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHH-HHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            999999999999999999999999999999977654433222 2234577899999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+++
T Consensus       240 vdgG~~~  246 (246)
T 3osu_A          240 VNGGMYM  246 (246)
T ss_dssp             ESTTSCC
T ss_pred             eCCCccC
Confidence            9999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.2e-50  Score=340.47  Aligned_cols=247  Identities=23%  Similarity=0.273  Sum_probs=218.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.   ..++.++++|++++++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999888777666652   25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++
T Consensus       102 ~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHHH
Confidence            999999999999976 457888999999999999999999999999999998776 799999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....  ............|.+++.+|+|+|++++||+++.+.++
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~i  259 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYV  259 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            9999999999999999999999999999999998532211  11111222234578999999999999999999999999


Q ss_pred             eceEEeeCCCcccc
Q 024839          238 SGHDLVVDGGFTAV  251 (262)
Q Consensus       238 ~G~~i~~dgG~~~~  251 (262)
                      ||++|.+|||+++.
T Consensus       260 tG~~i~vdGG~~~~  273 (277)
T 4fc7_A          260 TGAVLVADGGAWLT  273 (277)
T ss_dssp             CSCEEEESTTHHHH
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998774

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.4e-50  Score=336.91  Aligned_cols=248  Identities=29%  Similarity=0.364  Sum_probs=203.8

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |+++++++|++|||||++|||+++|++|+++|++|+++ .++.+..++..+++..  .++.++++|++|+++++++++++
T Consensus         1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999988 5666666665555532  57889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCcc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHA  156 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~  156 (262)
                      .++++++|+||||||......++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+. .+.+...+
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCSTTCHH
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCCCCcHH
Confidence            9999999999999998756678889999999999999999999999999999854   5899999999988 67788899


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |++||+|+++|+++++.|+++. |+||+|+||+++|++.................|.+++.+|+|++++++||+++++.+
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~  236 (259)
T 3edm_A          158 YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAY  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999987 999999999999998765532222222223347788999999999999999999999


Q ss_pred             eeceEEeeCCCccccc
Q 024839          237 VSGHDLVVDGGFTAVT  252 (262)
Q Consensus       237 i~G~~i~~dgG~~~~~  252 (262)
                      +||++|.+|||++...
T Consensus       237 itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          237 VTGACYDINGGVLFSE  252 (259)
T ss_dssp             CCSCEEEESBCSSBC-
T ss_pred             ccCCEEEECCCcCCCC
Confidence            9999999999987643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.6e-50  Score=338.79  Aligned_cols=243  Identities=29%  Similarity=0.367  Sum_probs=214.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .++.++++|++|+++++++++++.+++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999999888877776632  57889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHH--HHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR--VMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|  .|++++ .|+||++||..+..+.+...+|++||
T Consensus       102 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          102 IGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHHH
Confidence            99999999986 457888999999999999999999999999999  577766 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----------cchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----------NDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++.....          ............|.+++.+|+|+|++++||++
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  259 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT  259 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999754321          11111122233577899999999999999999


Q ss_pred             CCCCceeceEEeeCCCccc
Q 024839          232 DESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.+.++||++|.+|||+++
T Consensus       260 ~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          260 DAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             SGGGGCCSCEEEESTTCCC
T ss_pred             ccccCcCCcEEEECCCccC
Confidence            9999999999999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-50  Score=333.81  Aligned_cols=244  Identities=30%  Similarity=0.441  Sum_probs=198.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++. .++.++++|++|+++++++++++.++++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG-AAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999999988877776664 5788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCc----CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-----CCCcEEEEecCCCccCCCCC
Q 024839           83 SLDIMYSNAGVAGPVGTI----LDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-----KIRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~~~~ii~isS~~~~~~~~~  153 (262)
                      ++|+||||||+... ..+    .+.+.++|++.+++|+.+++.++++++|+|+++     +..|+||++||..+..+.+.
T Consensus        81 ~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tpc_A           81 HVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG  159 (257)
T ss_dssp             CCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             CCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC
Confidence            99999999998743 332    267899999999999999999999999999875     23789999999999999999


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHHHHHHHHcCC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  232 (262)
                      ..+|++||+|+++|+++++.|++++||+||+|+||+++|++............. ...|. +++.+|+|+++++.||+++
T Consensus       160 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~p~~~r~~~~~dva~~v~~l~s~  238 (257)
T 3tpc_A          160 QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALA-ASVPFPPRLGRAEEYAALVKHICEN  238 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHH-hcCCCCCCCCCHHHHHHHHHHHccc
Confidence            999999999999999999999999999999999999999997655433222222 23355 8899999999999999975


Q ss_pred             CCCceeceEEeeCCCcccc
Q 024839          233 ESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~~  251 (262)
                        .++||+.|.+|||+++.
T Consensus       239 --~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          239 --TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             --TTCCSCEEEESTTCCC-
T ss_pred             --CCcCCcEEEECCCccCC
Confidence              69999999999999874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.1e-49  Score=333.62  Aligned_cols=243  Identities=29%  Similarity=0.384  Sum_probs=210.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++++ .+..+++.+++.  ..++.++++|++|+++++++++++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999997665 445555555542  25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC-ccCCCCCCccch
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA-STVGGSGPHAYT  158 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~~Y~  158 (262)
                      +++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++   .|+||++||.. +..+.+....|+
T Consensus        93 ~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~  168 (270)
T 3is3_A           93 HFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYS  168 (270)
T ss_dssp             HHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCCCCCchhH
Confidence            999999999999987 5678889999999999999999999999999999854   58999999988 566778889999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-----------ccchHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-----------INDVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +||+|+++|+++++.|++++||+||+|+||+++|++....           ..+..........|.+++.+|+|+|++++
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  248 (270)
T 3is3_A          169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVG  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999986421           11112222233458899999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCcc
Q 024839          228 FLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ||+++.+.++||++|.+|||++
T Consensus       249 ~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          249 FLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHcCCccCCccCcEEEeCCCCC
Confidence            9999999999999999999974

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-49  Score=332.90  Aligned_cols=243  Identities=30%  Similarity=0.428  Sum_probs=212.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +..++++|++|||||++|||+++|++|+++|++|++++++. +..+++.+++.  ..++.++++|++|+++++++++++.
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999986654 55555555542  2578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-CCCCccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-GSGPHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-~~~~~~Y  157 (262)
                      ++++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..+ .+...+|
T Consensus       105 ~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          105 EALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCCSTTCHHH
T ss_pred             HHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCCCCCchHH
Confidence            9999999999999987 4578889999999999999999999999999999843   589999999877655 6788999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++............  ...|.+++.+|+|+|++++||+++.+.++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~r~~~pedvA~~v~fL~s~~~~~i  258 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQR--ERIATGSYGEPQDIAGLVAWLAGPQGKFV  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHH--HTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHH--hcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999999999999999999999999765433322222  23477899999999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      ||++|.+|||++.
T Consensus       259 tG~~i~vdGG~~a  271 (271)
T 3v2g_A          259 TGASLTIDGGANA  271 (271)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCCEEEeCcCccC
Confidence            9999999999863

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-50  Score=334.70  Aligned_cols=240  Identities=30%  Similarity=0.364  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++|++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+++.  ..++.++++|++++++++++++++.+++
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999987 455555555555442  2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+..+.+...+|++||
T Consensus       104 g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  179 (267)
T 3u5t_A          104 GGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHPSYGIYAAAK  179 (267)
T ss_dssp             SCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCCCchHHHHHH
Confidence            9999999999987 5678889999999999999999999999999999843   58999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|+|++++||+++.+.++||++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~  259 (267)
T 3u5t_A          180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQV  259 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEE
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence            99999999999999999999999999999999875533222222222345778999999999999999999999999999


Q ss_pred             EeeCCCc
Q 024839          242 LVVDGGF  248 (262)
Q Consensus       242 i~~dgG~  248 (262)
                      |.+|||+
T Consensus       260 i~vdGG~  266 (267)
T 3u5t_A          260 LRANGGI  266 (267)
T ss_dssp             EEESSSC
T ss_pred             EEeCCCc
Confidence            9999996

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.9e-49  Score=329.25  Aligned_cols=249  Identities=29%  Similarity=0.383  Sum_probs=209.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++++|++++++++++++++.++++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-DAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            456889999999999999999999999999999999999999888888775 5789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC---CCcEEEEecCCCccCCCCCCccchh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK---IRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~---~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++   ..++||++||..+..+.+....|++
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  162 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNA  162 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHH
Confidence            9999999999875567788899999999999999999999999999998642   2578999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +|+|+++|+++++.|++++||+||+|+||+++|++.......   ..........|.+++.+|+|++++++||+++++.+
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  242 (261)
T 3n74_A          163 TKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASM  242 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccC
Confidence            999999999999999999999999999999999987654211   11111222346788999999999999999999999


Q ss_pred             eeceEEeeCCCccccc
Q 024839          237 VSGHDLVVDGGFTAVT  252 (262)
Q Consensus       237 i~G~~i~~dgG~~~~~  252 (262)
                      +||++|.+|||+++..
T Consensus       243 itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          243 ITGVALDVDGGRSIGG  258 (261)
T ss_dssp             CCSCEEEESTTTTC--
T ss_pred             cCCcEEEecCCcccCC
Confidence            9999999999998854

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.3e-49  Score=338.79  Aligned_cols=247  Identities=34%  Similarity=0.478  Sum_probs=211.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC------------chhHHHHHhhhC--CCceEEEEecCCCHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ------------DELGNQVVSSIG--PEKASYRHCDVRDEK   68 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~   68 (262)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.  ..++.++++|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            345789999999999999999999999999999999876            444555444432  257899999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      +++++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..|+||++||..+.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            99999999999999999999999987 45778899999999999999999999999999999887546899999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-----------ccchH---hHHHh-hhccc
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-----------INDVE---GFVCK-VANLK  213 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-----------~~~~~---~~~~~-~~~~~  213 (262)
                      .+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++....           .....   ..... ...| 
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  278 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-  278 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-
Confidence            99999999999999999999999999999999999999999999875321           00000   00011 1123 


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +++.+|+|||++++||+++.+.|+||++|.+|||++++
T Consensus       279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            67889999999999999999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-49  Score=333.02  Aligned_cols=244  Identities=28%  Similarity=0.390  Sum_probs=211.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|. +..++..+++.  ..++.++++|++|+++++++.+ ..+++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHhc
Confidence            46789999999999999999999999999999999966 44445544442  2578899999999999999955 45567


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++||
T Consensus       105 g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          105 RRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHHHHH
Confidence            9999999999987 457888999999999999999999999999999998877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|+|++++||+++++.++||+
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~  262 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQ  262 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            9999999999999999999999999999999986543211 111122233577899999999999999999999999999


Q ss_pred             EEeeCCCcccc
Q 024839          241 DLVVDGGFTAV  251 (262)
Q Consensus       241 ~i~~dgG~~~~  251 (262)
                      +|.+|||++++
T Consensus       263 ~i~vdGG~~~s  273 (273)
T 3uf0_A          263 VLAVDGGWLAS  273 (273)
T ss_dssp             EEEESTTGGGC
T ss_pred             EEEECcCccCC
Confidence            99999998763

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-49  Score=326.94  Aligned_cols=243  Identities=28%  Similarity=0.397  Sum_probs=220.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++.  ..++.++++|++|+++++++++++.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4779999999999999999999999999999999999988877766653  25789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||+
T Consensus        82 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           82 AIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            999999999987 457788899999999999999999999999999998877 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      |++.|+++++.|++++||++|+|+||++.|++........... .....|.+++.+|+|+++++.||+++++.++||++|
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i  238 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSF-IATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHH-HHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHH-HhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEE
Confidence            9999999999999999999999999999999987664443332 233457788999999999999999999999999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       239 ~vdgG~~~  246 (247)
T 3lyl_A          239 HVNGGMYM  246 (247)
T ss_dssp             EESTTSSC
T ss_pred             EECCCEec
Confidence            99999876

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=6e-49  Score=325.31  Aligned_cols=245  Identities=31%  Similarity=0.441  Sum_probs=206.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+. +.+++..+..+ .++.++++|++|+++++++++++.+++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999999999999999999999998 66655333333 578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++||
T Consensus        81 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           81 GRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHHH
Confidence            9999999999986 456788899999999999999999999999999998876 79999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC-CCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA-GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++++.|+++++.|++++||+||+|+||+++|++.. ...............|.+++.+|+|+|+.++||+++++.+++|+
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~  238 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ  238 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCc
Confidence            99999999999999999999999999999999865 22111001111111466889999999999999999888999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||++.
T Consensus       239 ~~~vdGG~~~  248 (249)
T 2ew8_A          239 TLAVDGGMVR  248 (249)
T ss_dssp             EEEESSSCCC
T ss_pred             EEEECCCccC
Confidence            9999999753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.6e-50  Score=339.42  Aligned_cols=242  Identities=25%  Similarity=0.297  Sum_probs=214.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..+++.+++.  ..++.++++|++++++++++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            35789999999999999999999999999999999999888877766652  357899999999999999999999887 


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||
T Consensus       108 g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  185 (275)
T 4imr_A          108 APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYAATK  185 (275)
T ss_dssp             SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhHHHH
Confidence            9999999999986 457888999999999999999999999999999998877 79999999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++......   +..........|.+++.+|+|+|++++||+++++.++|
T Consensus       186 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~it  265 (275)
T 4imr_A          186 AAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMT  265 (275)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCC
Confidence            999999999999999999999999999999997643321   11111122222778999999999999999999999999


Q ss_pred             ceEEeeCCCc
Q 024839          239 GHDLVVDGGF  248 (262)
Q Consensus       239 G~~i~~dgG~  248 (262)
                      |++|.+|||+
T Consensus       266 G~~i~vdGG~  275 (275)
T 4imr_A          266 GETIFLTGGY  275 (275)
T ss_dssp             SCEEEESSCC
T ss_pred             CCEEEeCCCC
Confidence            9999999996

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=7.6e-49  Score=327.62  Aligned_cols=246  Identities=26%  Similarity=0.347  Sum_probs=212.0

Q ss_pred             CCCCCCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA-SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s-~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.++++|++|||||+ +|||+++|++|+++|++|++++|+.+..++..+++.   ..++.++++|++++++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            345789999999997 599999999999999999999999988877776662   2578999999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++..++||++||..+..+.+....|+
T Consensus        97 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  175 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA  175 (266)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHhCCCcEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHH
Confidence            9999999999999986 457888999999999999999999999999999999874478999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++|+|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|++++++||+++++.++|
T Consensus       176 ~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~t  255 (266)
T 3o38_A          176 AAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMT  255 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999999999999999999999999876553332222223345678899999999999999999999999


Q ss_pred             ceEEeeCCCcc
Q 024839          239 GHDLVVDGGFT  249 (262)
Q Consensus       239 G~~i~~dgG~~  249 (262)
                      |++|.+|||++
T Consensus       256 G~~i~vdgG~~  266 (266)
T 3o38_A          256 GEVVSVSSQRA  266 (266)
T ss_dssp             SCEEEESSCCC
T ss_pred             CCEEEEcCCcC
Confidence            99999999974

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=3.7e-49  Score=334.47  Aligned_cols=247  Identities=23%  Similarity=0.249  Sum_probs=213.9

Q ss_pred             CCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++++|++|||||++  |||+++|++|+++|++|++++|+.+..+.+.+.... ..+.+++||++|+++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4467899999999997  999999999999999999999997544433322211 3468999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|+||||||+...   ..++.+.+.++|.+.+++|+.+++.++++++|+|++   .|+||++||..+..+.+....
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~~~~~  181 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVPHYNV  181 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTTH
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCCCchh
Confidence            99999999999998632   267788999999999999999999999999998854   589999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........ .........|.+++.+|+|+|++++||+++.+.
T Consensus       182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~  261 (296)
T 3k31_A          182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGR  261 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999999999976653221 112222345778999999999999999999999


Q ss_pred             ceeceEEeeCCCccccc
Q 024839          236 YVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~~  252 (262)
                      ++||++|.+|||+++..
T Consensus       262 ~itG~~i~vdGG~~~~~  278 (296)
T 3k31_A          262 GTTGETVHVDCGYHVVG  278 (296)
T ss_dssp             TCCSCEEEESTTGGGCS
T ss_pred             CccCCEEEECCCccccC
Confidence            99999999999998864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-48  Score=327.34  Aligned_cols=245  Identities=25%  Similarity=0.326  Sum_probs=211.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh-
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY-   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~-   81 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ..++.++++|++++++++++++++.+.+ 
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999887776665552  2468899999999999999999999999 


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++||
T Consensus        98 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  175 (273)
T 1ae1_A           98 GKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASK  175 (273)
T ss_dssp             SCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhHHHH
Confidence            8999999999986 456788899999999999999999999999999998776 79999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----c-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----D-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++++.|+++++.|++++||+||+|+||+++|++......    . ..........|.+++.+|+|+|++++||+++.+.+
T Consensus       176 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  255 (273)
T 1ae1_A          176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  255 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999998654321    1 11111112347788999999999999999998899


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      +||++|.+|||+++.
T Consensus       256 ~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          256 ITGQIIWADGGFTAN  270 (273)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             cCCCEEEECCCcccC
Confidence            999999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=8.6e-49  Score=329.90  Aligned_cols=246  Identities=30%  Similarity=0.379  Sum_probs=212.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++++++++++++++.++++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG-GNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999999988888777664 578999999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcC----CCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           85 DIMYSNAGVAGPVGTIL----DLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      |+||||||+......+.    +.+.++|++++++|+.+++.++++++|+|+++  +|+||++||..+..+.+....|++|
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  158 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTAT  158 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhccCCCCCchhHHH
Confidence            99999999864333333    44567899999999999999999999999875  4899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---------hHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---------VEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+|+++|+++++.|++++ |+||+|+||+++|++.......         ..........|.+|+.+|+|++++++||++
T Consensus       159 Kaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  237 (281)
T 3zv4_A          159 KHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFAT  237 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhc
Confidence            999999999999999987 9999999999999986542110         111222234578999999999999999999


Q ss_pred             -CCCCceeceEEeeCCCcccccCc
Q 024839          232 -DESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       232 -~~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                       +.+.++||++|.+|||+++....
T Consensus       238 ~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          238 RGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             TTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             ccccccccCcEEEECCCCccccch
Confidence             77889999999999999986554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=3.3e-50  Score=335.23  Aligned_cols=248  Identities=23%  Similarity=0.317  Sum_probs=204.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC---chhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ---DELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++..  .++.++++|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999998765   3445555555532  57889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|.  + .|+||++||..+..+.+....|
T Consensus        86 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~-~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--P-NGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHCSEEEEEECCCCC-CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--E-EEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--C-CCEEEEEechhhccCCCCCchh
Confidence            99999999999999987 457888999999999999999999999999999982  3 6899999999998888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|+|++++||+++ +.++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~i  240 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWI  240 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT-TTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCc
Confidence            999999999999999999999999999999999999875543322222223335778899999999999999998 8899


Q ss_pred             eceEEeeCCCcccccCcc
Q 024839          238 SGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~~~  255 (262)
                      ||++|.+|||+++....+
T Consensus       241 tG~~i~vdGg~~~~~~~~  258 (262)
T 3ksu_A          241 NGQTIFANGGYTTREGHH  258 (262)
T ss_dssp             CSCEEEESTTCCCC----
T ss_pred             cCCEEEECCCccCCCccc
Confidence            999999999997755443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=4.2e-49  Score=329.79  Aligned_cols=246  Identities=32%  Similarity=0.430  Sum_probs=211.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+...        .....+++|++|+++++++++++.+++++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--------NVSDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--------TSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--------CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999876541        24678999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||+|
T Consensus        82 iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  159 (269)
T 3vtz_A           82 IDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHA  159 (269)
T ss_dssp             CCEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHHHHHHH
Confidence            99999999986 457888999999999999999999999999999998877 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +++|+++++.|+++ ||+||+|+||+++|++......          ...........|.+++.+|+|+|++++||+++.
T Consensus       160 ~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  238 (269)
T 3vtz_A          160 LLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR  238 (269)
T ss_dssp             HHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999998 8999999999999997532210          111111223357789999999999999999999


Q ss_pred             CCceeceEEeeCCCcccccC--ccccccC
Q 024839          234 SAYVSGHDLVVDGGFTAVTN--VMSMLEG  260 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~--~~~~~~~  260 (262)
                      +.++||++|.+|||+++...  .+..+|+
T Consensus       239 ~~~itG~~i~vdGG~~~~~~~~~p~~~~~  267 (269)
T 3vtz_A          239 SSFITGACLTVDGGLLSKLPISTPNADNS  267 (269)
T ss_dssp             GTTCCSCEEEESTTGGGBCCCCCCCC---
T ss_pred             cCCCcCcEEEECCCccccCCCCCCCcccC
Confidence            99999999999999876533  3444444

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-48  Score=320.31  Aligned_cols=239  Identities=36%  Similarity=0.492  Sum_probs=212.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.++++   +.++++|++|+++++++++++.++++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG---AHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT---CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---CEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999999888877766553   7889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||.. ..+.+....|+++|+++
T Consensus        79 d~lvn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~~~~~Y~asK~a~  155 (245)
T 1uls_A           79 DGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNLGQANYAASMAGV  155 (245)
T ss_dssp             CEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCCCchhHHHHHHHH
Confidence            9999999986 456788899999999999999999999999999998776 79999999998 77878889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.|+++++.|++++||+||+|+||+++|++........... .....|.+++.+|+|+|+.++||+++++.++||+.+.+
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~v  234 (245)
T 1uls_A          156 VGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK-AIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFV  234 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH-HHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHH-HHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence            99999999999999999999999999999876432221111 11224668899999999999999999889999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+++
T Consensus       235 dgG~~~  240 (245)
T 1uls_A          235 DGGRTI  240 (245)
T ss_dssp             STTTTT
T ss_pred             CCCccc
Confidence            999876

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=9.6e-49  Score=331.42  Aligned_cols=246  Identities=24%  Similarity=0.278  Sum_probs=208.8

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHH---HHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQ---VVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +.++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+.   ..+..  .++.++++|++|+++++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            346889999999999  559999999999999999999998543332   22222  35889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|+||||||+...   ..++.+.+.++|.+.+++|+.+++.++++++|+|++   .|+||++||..+..+.+..
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~  180 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVMPNY  180 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBCTTT
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCCCch
Confidence            9999999999999998632   467889999999999999999999999999999854   6899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|+|++++||+++.
T Consensus       181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (293)
T 3grk_A          181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL  260 (293)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999987654322 11222223457789999999999999999999


Q ss_pred             CCceeceEEeeCCCcccccC
Q 024839          234 SAYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~  253 (262)
                      +.++||++|.+|||+++..-
T Consensus       261 ~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          261 SRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             GTTCCSCEEEESTTGGGBCC
T ss_pred             ccCCcceEEEECCCcccCCC
Confidence            99999999999999988654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-49  Score=328.37  Aligned_cols=246  Identities=29%  Similarity=0.453  Sum_probs=214.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    ..++.++++|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887776655542    35788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccHHH
Confidence            9999999999999864326788899999999999999999999999999998876 799999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC----ccchHh-H--HHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT----INDVEG-F--VCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~-~--~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ||+++++|+++++.|++++||+||+|+||+++|++....    .+.... .  ......|.+++.+|+|+|+.++||+++
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~  247 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999985421    011111 0  111224668899999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+++|++|.+|||+++
T Consensus       248 ~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          248 DASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             cccCCCCCEEEECCCccc
Confidence            889999999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=4.5e-49  Score=329.30  Aligned_cols=244  Identities=23%  Similarity=0.337  Sum_probs=211.1

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    ...+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            4567899999999999999999999999999999999999888777666652    3567889999999998877654  


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                        +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|
T Consensus        82 --~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  157 (267)
T 3t4x_A           82 --KYPKVDILINNLGIF-EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHY  157 (267)
T ss_dssp             --HCCCCSEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHHH
T ss_pred             --hcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchHH
Confidence              578999999999987 457888999999999999999999999999999999877 7999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cch-HhHHHhh--hcccCCCCCHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDV-EGFVCKV--ANLKGIVLKAKHVA  223 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~-~~~~~~~--~~~~~~~~~~~~va  223 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....           .+. .......  ..|.+++.+|+|+|
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA  237 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA  237 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHH
Confidence            999999999999999999999999999999999998643210           011 1111111  13568999999999


Q ss_pred             HHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          224 EAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       224 ~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++++||+++.+.++||++|.+|||++.+
T Consensus       238 ~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          238 HLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999999999999999998764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.7e-48  Score=324.57  Aligned_cols=243  Identities=30%  Similarity=0.437  Sum_probs=208.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. .+++.+++.   ..++.++++|++|+++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999877 666665552   2468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+.+....|++||
T Consensus        82 g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHHH
Confidence            9999999999986 456788899999999999999999999999999998876 79999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--------HhHHH---hhhcccCCCCCHHHHHHHHHHHc
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--------EGFVC---KVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      ++++.|+++++.|++++||+||+|+||+++|++........        .....   ....|.+++.+|+|+++.++||+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~  239 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999865432100        01111   12246688999999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+.++||+.+.+|||+++
T Consensus       240 s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          240 SDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             ChhhcCCCCCEEEECCCccC
Confidence            99889999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.6e-48  Score=322.21  Aligned_cols=242  Identities=31%  Similarity=0.497  Sum_probs=213.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++.  ..++.++++|++|+++++++++++.++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 7666666655542  24688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||+
T Consensus        82 ~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           82 QVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             CCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            999999999986 456788899999999999999999999999999998776 799999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.|+++++.|++++||+||+|+||+++|++............ ....|.+++.+|+|+|+.++||+++++.++||+++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  238 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEM-LKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL  238 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHH-HHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence            99999999999999999999999999999998765432222211 12346688999999999999999998899999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       239 ~vdgG~~~  246 (246)
T 2uvd_A          239 NVDGGMVM  246 (246)
T ss_dssp             EESTTSCC
T ss_pred             EECcCccC
Confidence            99999753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.5e-48  Score=324.90  Aligned_cols=240  Identities=21%  Similarity=0.210  Sum_probs=199.5

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+++++++|++|||||++|||+++|++|+++|++|++++|+.+...+..+...   +.++++|++++++++++++++.++
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG---AVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT---CEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC---CeEEECCCCCHHHHHHHHHHHHHh
Confidence            35667899999999999999999999999999999999999877655444443   788999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+... .. .+.+.++|.+++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++|
T Consensus        97 ~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  173 (260)
T 3gem_A           97 TSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCAT  173 (260)
T ss_dssp             CSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred             cCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHHHH
Confidence            9999999999998633 33 5678899999999999999999999999998876 7999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|+++ +|+||+|+||+++|++.....   .........|.+++.+|+|++++++||+  .+.++||+
T Consensus       174 Kaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~---~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~  247 (260)
T 3gem_A          174 KAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAA---YRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGT  247 (260)
T ss_dssp             HHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSC
T ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCC
Confidence            99999999999999998 699999999999998754211   1111122347788999999999999999  46799999


Q ss_pred             EEeeCCCccccc
Q 024839          241 DLVVDGGFTAVT  252 (262)
Q Consensus       241 ~i~~dgG~~~~~  252 (262)
                      +|.+|||++++.
T Consensus       248 ~i~vdGG~~~~~  259 (260)
T 3gem_A          248 TLTVNGGRHVKG  259 (260)
T ss_dssp             EEEESTTTTTC-
T ss_pred             EEEECCCcccCC
Confidence            999999998853

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.8e-48  Score=324.95  Aligned_cols=246  Identities=26%  Similarity=0.327  Sum_probs=215.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.++.+++.+++.   ..++.++++|++|+++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999999887776665552   24688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++
T Consensus        82 ~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  159 (263)
T 3ai3_A           82 SFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNV  159 (263)
T ss_dssp             HHSSCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHH
Confidence            999999999999986 456788899999999999999999999999999998776 799999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--------hHhHHH--hhh-cccCCCCCHHHHHHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--------VEGFVC--KVA-NLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--------~~~~~~--~~~-~~~~~~~~~~~va~~~~~  228 (262)
                      ||++++.|+++++.|++++||+||+|+||+++||+.......        ......  ... .|.+++.+|+|+|++++|
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVF  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999975321110        111111  111 467889999999999999


Q ss_pred             HcCCCCCceeceEEeeCCCccc
Q 024839          229 LASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++++.+++|+.+.+|||+++
T Consensus       240 l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          240 LCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HTSTTCTTCCSCEEEESTTCCC
T ss_pred             HcCccccCCCCcEEEECCCccc
Confidence            9999889999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.8e-49  Score=336.04  Aligned_cols=245  Identities=29%  Similarity=0.296  Sum_probs=211.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhh--CCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSI--GPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+  ..+++.+.+  ...++.++++|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999988733  333333332  12578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..+.+....|+
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCCCchHHH
Confidence            999999999999998755678889999999999999999999999999998843   58999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.... .............|.+++.+|+|++++++||+++++.++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  280 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999999973221 111111112223477899999999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      ||++|.+|||+++
T Consensus       281 tG~~i~vdGG~~l  293 (294)
T 3r3s_A          281 TAEVHGVCGGEHL  293 (294)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             CCCEEEECCCccC
Confidence            9999999999876

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.1e-48  Score=327.32  Aligned_cols=244  Identities=25%  Similarity=0.357  Sum_probs=211.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.+|++|||||++|||+++|++|+++|++|++++ ++.+..++..+.+.  ..++.++++|++|+++++++++++.++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999998 55555554444442  25789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .|+||++||..+..+.+....|++||+
T Consensus       103 ~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          103 KVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             CCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHHH
Confidence            999999999987 456788899999999999999999999999999998876 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      |+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|++++++||+++++.++||++|
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            99999999999999999999999999999999876543322212222346788999999999999999999999999999


Q ss_pred             eeCCCcccc
Q 024839          243 VVDGGFTAV  251 (262)
Q Consensus       243 ~~dgG~~~~  251 (262)
                      .+|||++++
T Consensus       261 ~vdgG~~~s  269 (269)
T 3gk3_A          261 AINGGMHMS  269 (269)
T ss_dssp             EESTTSCCC
T ss_pred             EECCCEeCc
Confidence            999998763

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=3e-49  Score=334.22  Aligned_cols=245  Identities=26%  Similarity=0.343  Sum_probs=213.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+... ...+.+.  ..++.++++|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999876433 3333222  257889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .++||++||..+..+.+....|++|
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  199 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSAT  199 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCCChhHHHH
Confidence            9999999999998755678889999999999999999999999999998843   5799999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|++++||+||+|+||+++|++.................|.+++.+|+|+|++++||+++++.++||+
T Consensus       200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~  279 (291)
T 3ijr_A          200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQ  279 (291)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCC
Confidence            99999999999999999999999999999999986433222222222234577899999999999999999999999999


Q ss_pred             EEeeCCCcccc
Q 024839          241 DLVVDGGFTAV  251 (262)
Q Consensus       241 ~i~~dgG~~~~  251 (262)
                      +|.+|||+++.
T Consensus       280 ~i~vdGG~~~~  290 (291)
T 3ijr_A          280 MIHVNGGVIVN  290 (291)
T ss_dssp             EEEESSSCCCC
T ss_pred             EEEECCCcccC
Confidence            99999999863

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.1e-48  Score=326.63  Aligned_cols=245  Identities=22%  Similarity=0.288  Sum_probs=214.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .++.++++|++|+++++++++++.+.++
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999998888777776643 3688899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCC----cEEEEecCCCccCCCCCCc-cc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIR----GSIICTTSTASTVGGSGPH-AY  157 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~----~~ii~isS~~~~~~~~~~~-~Y  157 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .    ++||++||..+..+.+... .|
T Consensus       105 ~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~~~~~Y  182 (276)
T 2b4q_A          105 RLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGEQAYAY  182 (276)
T ss_dssp             CCSEEEECCCCC-CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCCSCTTH
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCCCcccc
Confidence            999999999986 446788899999999999999999999999999998765 4    8999999999988888888 99


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh-hhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK-VANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.............. ...|.+++.+|+|+|++++||+++++.+
T Consensus       183 ~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  262 (276)
T 2b4q_A          183 GPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY  262 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999999864321111111111 0346788999999999999999998899


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +||++|.+|||+++
T Consensus       263 ~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          263 MTGNVIPIDGGFHL  276 (276)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CCCCEEEeCCCccC
Confidence            99999999999864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.5e-48  Score=324.88  Aligned_cols=244  Identities=24%  Similarity=0.294  Sum_probs=211.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.    ..++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999887777666553    22688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++ +|+||||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++
T Consensus        83 ~~g-id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LGG-ADILVYSTGGP-RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TTC-CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hcC-CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhHH
Confidence            999 99999999976 456788899999999999999999999999999998876 799999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC----------CccchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG----------TINDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      ||++++.|+++++.|++++||+||+|+||+++|++...          ..............|.+++.+|+|+|+.++||
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l  239 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFL  239 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998652          11110001111123668889999999999999


Q ss_pred             cCCCCCceeceEEeeCCCccc
Q 024839          230 ASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++.+.++||++|.+|||+++
T Consensus       240 ~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          240 ASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTTTC
T ss_pred             hCccccCCCCCEEEeCCCccC
Confidence            999889999999999999763

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-49  Score=327.50  Aligned_cols=243  Identities=28%  Similarity=0.414  Sum_probs=213.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .++.++++|++++++++++++++.+++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999998887776666532  468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||......++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++||
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHHHH
Confidence            99999999999763456788899999999999999999999999999998876 79999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC------------cc--ch-HhHHHhhhcccCCCCCHHHHHHHH
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT------------IN--DV-EGFVCKVANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~------------~~--~~-~~~~~~~~~~~~~~~~~~~va~~~  226 (262)
                      ++++.|+++++.|++++||+||+|+||+++|++....            ..  .. .........|.+++.+|+|+|+++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999985431            11  11 111111234778899999999999


Q ss_pred             HHHcCCCCCceeceEEeeCCC
Q 024839          227 LFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      +||+++.+.++||++|.+|||
T Consensus       242 ~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999998

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1e-48  Score=326.81  Aligned_cols=237  Identities=27%  Similarity=0.358  Sum_probs=208.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+..++         ...+++|+++.++++++++++.++++
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---------~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA---------DLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC---------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh---------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            557889999999999999999999999999999999998765432         24458999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++||+
T Consensus        94 ~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  171 (266)
T 3uxy_A           94 RLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKA  171 (266)
T ss_dssp             CCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHHH
Confidence            999999999987 457888999999999999999999999999999999877 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN------DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |+++|+++++.|++++||+||+|+||+++|++......      ...........|.+++.+|+|+|++++||+++.+.+
T Consensus       172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~  251 (266)
T 3uxy_A          172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARY  251 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999997543211      111112223357788999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +||++|.+|||+++
T Consensus       252 itG~~i~vdGG~~~  265 (266)
T 3uxy_A          252 LCGSLVEVNGGKAV  265 (266)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CcCCEEEECcCEeC
Confidence            99999999999876

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.8e-48  Score=328.36  Aligned_cols=244  Identities=24%  Similarity=0.241  Sum_probs=210.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC---CCceEEEEecCCCHH----------
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG---PEKASYRHCDVRDEK----------   68 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~----------   68 (262)
                      |.++++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.   ..++.++++|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            3467899999999999999999999999999999999 99888777766653   357899999999999          


Q ss_pred             -------HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCC--------------HHHHHHHHHHHhhHHHHHHHHHH
Q 024839           69 -------QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD--------------MAQFDRTIATNLAGSVMAVKYAA  127 (262)
Q Consensus        69 -------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~nv~~~~~l~~~~~  127 (262)
                             +++++++++.++++++|+||||||+. ...++.+.+              .++|.+++++|+.+++.+++.++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                   99999999999999999999999986 446777888              99999999999999999999999


Q ss_pred             HHHHhCCC-----CcEEEEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch
Q 024839          128 RVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV  202 (262)
Q Consensus       128 ~~~~~~~~-----~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~  202 (262)
                      |.|++++.     .++||++||..+..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++ . ..+..
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~~~  240 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPAV  240 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCHHH
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCHHH
Confidence            99987541     48999999999999999999999999999999999999999999999999999999998 4 21111


Q ss_pred             HhHHHhhhcccC-CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          203 EGFVCKVANLKG-IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       203 ~~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      .. ......|.+ ++.+|+|+|+.++||+++.+.++||++|.+|||+++
T Consensus       241 ~~-~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          241 WE-GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HH-HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HH-HHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            11 111223666 899999999999999999899999999999999876

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-48  Score=324.29  Aligned_cols=256  Identities=21%  Similarity=0.285  Sum_probs=207.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH-HHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+.+.. +.+.+.+..  .++.++++|++|+++++++++++.++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999997775543 333333322  47899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCC-CCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC-Cc-cCCCCCCccc
Q 024839           81 YGSLDIMYSNAGVA-GPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST-AS-TVGGSGPHAY  157 (262)
Q Consensus        81 ~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~-~~-~~~~~~~~~Y  157 (262)
                      ++++|+||||||+. ....++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||. .+ ..+.+....|
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCchh
Confidence            99999999999942 2446788899999999999999999999999999998877 7999999998 43 4566777899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.....+..... .....|.+++.+|+|+|++++||+++.+.++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~r~~~~~dva~~v~~l~s~~~~~i  240 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQL-KEHNTPIGRSGTGEDIARTISFLCEDDSDMI  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC---------CCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHH-HhhcCCCCCCcCHHHHHHHHHHHcCcccCCC
Confidence            999999999999999999999999999999999999987664332221 2223477889999999999999999999999


Q ss_pred             eceEEeeCCCcccccCccccccCC
Q 024839          238 SGHDLVVDGGFTAVTNVMSMLEGH  261 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~~~~~~~~~  261 (262)
                      ||++|.+|||+++.-....+.+-|
T Consensus       241 tG~~i~vdGG~~~~~~~~~~~~~~  264 (264)
T 3i4f_A          241 TGTIIEVTGAVDVIHREGHHHHHH  264 (264)
T ss_dssp             CSCEEEESCSCCCCC---------
T ss_pred             CCcEEEEcCceeeccCCccccCCC
Confidence            999999999999987776665543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-48  Score=328.34  Aligned_cols=242  Identities=33%  Similarity=0.447  Sum_probs=204.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC------------chhHHHHHhhhC--CCceEEEEecCCCHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ------------DELGNQVVSSIG--PEKASYRHCDVRDEK   68 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~   68 (262)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.  ..++.++++|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            346789999999999999999999999999999999987            455555444432  257899999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      +++++++++.++++++|+||||||+... .    .+.++|++++++|+.+++.++++++|+|++++..|+||++||..+.
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999999999999999998632 2    2689999999999999999999999999876546899999999988


Q ss_pred             CCC----CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HH---------HhhhcccC
Q 024839          149 VGG----SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FV---------CKVANLKG  214 (262)
Q Consensus       149 ~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~---------~~~~~~~~  214 (262)
                      .+.    +...+|++||+|+++|+++++.|++++||+||+|+||+++|++.......... ..         .....| +
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            776    56678999999999999999999999999999999999999987643211000 00         001123 6


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          215 IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       215 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+|+|+|++++||+++.+.++||++|.+|||+++
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            788999999999999999999999999999999875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-48  Score=322.54  Aligned_cols=247  Identities=32%  Similarity=0.429  Sum_probs=212.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.  + .++++|++|+++++++++++.+++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999999877 66666664  3 78999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++||++
T Consensus        78 iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  155 (256)
T 2d1y_A           78 VDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGG  155 (256)
T ss_dssp             CCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHHHH
Confidence            99999999986 456788899999999999999999999999999998876 7999999999999988889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC----c-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT----I-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++.|+++++.|++++||+||+|+||+++|++....    . ............|.+++.+|+|+|++++||+++.+.+++
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~  235 (256)
T 2d1y_A          156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  235 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            99999999999999999999999999999875321    0 111001111224668899999999999999999888999


Q ss_pred             ceEEeeCCCcccccCccc
Q 024839          239 GHDLVVDGGFTAVTNVMS  256 (262)
Q Consensus       239 G~~i~~dgG~~~~~~~~~  256 (262)
                      |+.+.+|||+++.-...+
T Consensus       236 G~~~~v~gG~~~~~~~~~  253 (256)
T 2d1y_A          236 GAILPVDGGMTASFMMAG  253 (256)
T ss_dssp             SCEEEESTTGGGBC----
T ss_pred             CCEEEECCCccccccccC
Confidence            999999999987554433

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.3e-48  Score=327.16  Aligned_cols=245  Identities=28%  Similarity=0.382  Sum_probs=210.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+ ..+.+.+.+.  ..++.++++|++++++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999544 3444444332  25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|+||||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++
T Consensus       104 ~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  181 (271)
T 4iin_A          104 SDGGLSYLVNNAGVV-RDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTNYSA  181 (271)
T ss_dssp             HHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCcC-CCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchHhHH
Confidence            999999999999987 456788899999999999999999999999999998876 799999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|++.|+++++.|++++||+|++|+||+++|++.......... ......|.+++.+|+|+|+++.||+++++.++||
T Consensus       182 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG  260 (271)
T 4iin_A          182 SKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA-DYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITG  260 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHH-HHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcC
Confidence            999999999999999999999999999999999987665433222 2222346788999999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+.|
T Consensus       261 ~~i~vdGG~~~  271 (271)
T 4iin_A          261 ETLKVNGGLYM  271 (271)
T ss_dssp             CEEEESTTSCC
T ss_pred             CEEEeCCCeeC
Confidence            99999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=7.7e-49  Score=325.23  Aligned_cols=235  Identities=23%  Similarity=0.347  Sum_probs=209.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecC--CCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDV--RDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~--~~~~~i~~~~~~~~~   79 (262)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   .++.++.+|+  +++++++++++++.+
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888777666532   3788999999  999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+...+|++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  167 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAA  167 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCCchhHH
Confidence            9999999999999865667888999999999999999999999999999998877 799999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|+++|+++++.|++++ |+||+|+||+++|++.......         .+..++.+|+|+++.++||+++++.++||
T Consensus       168 sK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~dva~~~~~L~s~~~~~itG  237 (252)
T 3f1l_A          168 SKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT---------EDPQKLKTPADIMPLYLWLMGDDSRRKTG  237 (252)
T ss_dssp             HHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT---------CCGGGSBCTGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc---------cchhccCCHHHHHHHHHHHcCccccCCCC
Confidence            9999999999999999987 9999999999999874321111         12245779999999999999999999999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      ++|.+|||+..
T Consensus       238 ~~i~vdgG~~~  248 (252)
T 3f1l_A          238 MTFDAQPGRKP  248 (252)
T ss_dssp             CEEESSCC---
T ss_pred             CEEEeCCCcCC
Confidence            99999999854

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-48  Score=324.36  Aligned_cols=245  Identities=28%  Similarity=0.381  Sum_probs=214.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-C--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-G--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ .  ..++.++++|++++++++++++++.++
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777666555 1  246889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC-ccCCCCCCccchh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA-STVGGSGPHAYTI  159 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~~Y~~  159 (262)
                      ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||.. +..+.+....|++
T Consensus        97 ~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~a  174 (267)
T 1vl8_A           97 FGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAA  174 (267)
T ss_dssp             HSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCChhHHH
Confidence            99999999999986 456788899999999999999999999999999998776 79999999998 8888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ||++++.|+++++.|++++||+||+|+||+++|++...... ...........|.+++.+|+|+|+.++||+++.+.+++
T Consensus       175 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~it  254 (267)
T 1vl8_A          175 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT  254 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCc
Confidence            99999999999999999999999999999999998643211 11111111224668899999999999999999889999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.|.+|||+++
T Consensus       255 G~~i~vdGG~~~  266 (267)
T 1vl8_A          255 GQIIFVDGGWTA  266 (267)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECCCCCC
Confidence            999999999865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.2e-48  Score=322.55  Aligned_cols=241  Identities=28%  Similarity=0.373  Sum_probs=211.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh--HHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL--GNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.  +++..+++.  ..++.++++|++++++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999877  666655553  247889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCC-cEEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIR-GSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|+||||||+. ...++.+.+.++|.+++++|+.+++.++++++|.|++++ . ++||++||..+..+.+....|++||+
T Consensus        82 iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           82 FDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCCCchhHHHHHH
Confidence            99999999986 456788899999999999999999999999999998766 5 89999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--------c--chHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--------N--DVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ++++|+++++.|++++||+||+|+||+++|++.....        .  ...........|.+++.+|+|+|++++||+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  239 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE  239 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999854311        0  11011111224668899999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      .+.++||+.|.+|||+++
T Consensus       240 ~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          240 NSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGTTCCSCEEEESSSSCC
T ss_pred             ccCCCCCCEEEECCCEec
Confidence            889999999999999865

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-48  Score=323.73  Aligned_cols=245  Identities=27%  Similarity=0.384  Sum_probs=181.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999988887777663  257889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCC--CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           81 YGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        81 ~~~~d~li~~ag~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++|+||||||+.+  ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+.   +....|+
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---CCCchhH
Confidence            999999999999842  334567889999999999999999999999999998877 7999999999877   3456899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +||+|++.|+++++.|++++||+|++|+||+++|++.................|.+++.+|+|+++++.||+++.+.++|
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  239 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWIT  239 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCC
Confidence            99999999999999999999999999999999999876543322221222234667888999999999999999999999


Q ss_pred             ceEEeeCCCcccc
Q 024839          239 GHDLVVDGGFTAV  251 (262)
Q Consensus       239 G~~i~~dgG~~~~  251 (262)
                      |++|.+|||+.++
T Consensus       240 G~~~~vdgG~~~~  252 (253)
T 3qiv_A          240 GQIFNVDGGQIIR  252 (253)
T ss_dssp             SCEEEC-------
T ss_pred             CCEEEECCCeecC
Confidence            9999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.8e-48  Score=321.78  Aligned_cols=246  Identities=28%  Similarity=0.393  Sum_probs=215.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ..++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999887776665552  2468889999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+.+....|+++|
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHHHHH
Confidence            99999999999864446778899999999999999999999999999998876 79999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++++.|+++++.|++++||+||+|+||+++|++...... ...........|.+++.+|+|+|+++.||+++++.+++|+
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~  248 (260)
T 2zat_A          169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGE  248 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCC
Confidence            999999999999999999999999999999998542111 1111111223466889999999999999999988999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      ++.+|||+..
T Consensus       249 ~~~vdgG~~~  258 (260)
T 2zat_A          249 TVVVGGGTAS  258 (260)
T ss_dssp             EEEESTTCCC
T ss_pred             EEEECCCccc
Confidence            9999999865

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=7.4e-48  Score=320.68  Aligned_cols=246  Identities=24%  Similarity=0.302  Sum_probs=215.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.  ..++.++++|++|+++++++++++.+++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999887776666552  2478899999999999999999999999


Q ss_pred             -CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           82 -GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        82 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       +++|+||||||+. ...++.+.+.++|.+++++|+.+++.++++++|+|++++ .++||++||..+..+.+....|++|
T Consensus        85 ~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           85 HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHHH
Confidence             8999999999986 456788899999999999999999999999999998876 7999999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--hHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |++++.|+++++.|++++||+||+|+||+++|++.......  ....  ......|.+++.+|+|+|+.++||+++++.+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~  242 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY  242 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999975432111  1110  1112246688999999999999999988899


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      ++|+++.+|||+++.
T Consensus       243 ~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          243 VTGQIIYVDGGLMAN  257 (260)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCEEEECCCcccc
Confidence            999999999998763

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.2e-48  Score=325.00  Aligned_cols=240  Identities=28%  Similarity=0.412  Sum_probs=196.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+...   +++. .++.++++|++|+++++++++.+.+ ++
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~-~g   78 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADLG-DRARFAAADVTDEAAVASALDLAET-MG   78 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHTC-TTEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---HhcC-CceEEEECCCCCHHHHHHHHHHHHH-hC
Confidence            45688999999999999999999999999999999999655433   3333 5789999999999999999998877 89


Q ss_pred             CcCEEEeCCcCCCCC---CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh--------CCCCcEEEEecCCCccCCC
Q 024839           83 SLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA--------NKIRGSIICTTSTASTVGG  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--------~~~~~~ii~isS~~~~~~~  151 (262)
                      ++|+||||||+....   .+..+.+.++|++++++|+.+++.++++++|+|++        ++ .|+||++||..+..+.
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEE-RGVIINTASVAAFDGQ  157 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCC-SEEEEEECCCC--CCH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCC-CcEEEEEcchhhcCCC
Confidence            999999999975321   11234889999999999999999999999999987        34 7899999999999988


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHHHHHHHHc
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLA  230 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  230 (262)
                      +....|++||+|+++|+++++.|++++||+||+|+||+++|++.....+........ ..|. +++.+|+|++++++||+
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~r~~~p~dva~~v~~l~  236 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGK-QVPHPSRLGNPDEYGALAVHII  236 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHH-TSSSSCSCBCHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHh-cCCCCCCccCHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999999987654443332222 3355 88999999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccc
Q 024839          231 SDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++  .++||++|.+|||+++.
T Consensus       237 s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          237 EN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HC--TTCCSCEEEESTTC---
T ss_pred             cC--CCCCCCEEEECCCccCC
Confidence            86  79999999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-48  Score=321.64  Aligned_cols=243  Identities=21%  Similarity=0.282  Sum_probs=213.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+...+..+.+.  ..++.++++|++|+++++++++++.+++
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999887 55555554444432  2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|++||
T Consensus        90 g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A           90 GEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             CCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCcccHHHH
Confidence            9999999999987 456788999999999999999999999999999999877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+|++|+||+++|++.....+...... ....|.+++.+|+|+|++++||+++++.++||+.
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~  246 (256)
T 3ezl_A          168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKI-VATIPVRRLGSPDEIGSIVAWLASEESGFSTGAD  246 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHH-HHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcE
Confidence            999999999999999999999999999999998766544332222 2234778899999999999999999999999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.+|||+++
T Consensus       247 i~vdgG~~~  255 (256)
T 3ezl_A          247 FSLNGGLHM  255 (256)
T ss_dssp             EEESTTSCC
T ss_pred             EEECCCEeC
Confidence            999999876

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-48  Score=320.59  Aligned_cols=242  Identities=32%  Similarity=0.402  Sum_probs=211.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.++++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999999887776666552  24688999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++..++||++||..+..+.+....|++||++++
T Consensus        82 ~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           82 VIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            999999986 4567888999999999999999999999999999987542589999999999998888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----------cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----------NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +|+++++.|++++||+||+|+||+++|++.....          ............|.+++.+|+|+|++++||+++++.
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999754221          010001111124668899999999999999999889


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ++||++|.+|||+++
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999865

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-47  Score=319.90  Aligned_cols=245  Identities=29%  Similarity=0.441  Sum_probs=214.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.. ++.++++|++|+++++++++++.+++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999998888777766653 6788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++.+++|+.+++.+++++.|.|++++..++||++||..+..+.+....|++||++
T Consensus        87 iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (263)
T 3ak4_A           87 FDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFA  165 (263)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHH
Confidence            99999999986 45678889999999999999999999999999999876435899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----c-----chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----N-----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ++.|+++++.|++++||+||+|+||+++|++.....     .     ...........|.+++.+|+|+|++++||+++.
T Consensus       166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~  245 (263)
T 3ak4_A          166 VFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDA  245 (263)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999753211     0     000011112246688999999999999999988


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      +.+++|+.|.+|||+++
T Consensus       246 ~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          246 ARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEECcCEeC
Confidence            88999999999999865

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.2e-47  Score=320.29  Aligned_cols=251  Identities=24%  Similarity=0.258  Sum_probs=216.8

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHH---HHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQ---VVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+.   ..++....++.++++|++|+++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999  669999999999999999999998654333   333334347899999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|+||||||+...   ..++.+.+.++|.+.+++|+.+++.++++++|+|++   .|+||++||..+..+.+..
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTT
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCCCc
Confidence            9999999999999998642   467788999999999999999999999999998853   5899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++........ .........|.+++.+|+|+|+.++||++++
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~  238 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDM  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999999877654321 1112222347788999999999999999999


Q ss_pred             CCceeceEEeeCCCcccccCccc
Q 024839          234 SAYVSGHDLVVDGGFTAVTNVMS  256 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~~~~  256 (262)
                      +.++||+.|.+|||++.....+.
T Consensus       239 ~~~~tG~~i~vdGG~~~~~~~~~  261 (266)
T 3oig_A          239 SRGITGENLHVDSGFHITARLEH  261 (266)
T ss_dssp             GTTCCSCEEEESTTGGGCCCCC-
T ss_pred             hhcCcCCEEEECCCeEEeeecCC
Confidence            99999999999999988766554

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.9e-48  Score=323.40  Aligned_cols=244  Identities=28%  Similarity=0.413  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhH-HHHHhhhC---CCceEEEEecCCCHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIG---PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         4 ~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.   ..++.++++|++++++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            36789999999999  9999999999999999999998886544 33333332   257899999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--CCCc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPH  155 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~  155 (262)
                      .++++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.  +...
T Consensus        96 ~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           96 VADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHTSCCSEEEECCCCC-CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCCCCC
Confidence            99999999999999987 456788899999999999999999999999999999877 7999999999988765  4678


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .|++||+|+++|+++++.|++++ |+||+|+||+++|++........... .....|.+++.+|+|++++++||+++++.
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~r~~~~~dva~~~~~l~s~~~~  251 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQL-WHSMIPMGRDGLAKELKGAYVYFASDAST  251 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHH-HHTTSTTSSCEETHHHHHHHHHHHSTTCT
T ss_pred             cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHH-HHhcCCCCCCcCHHHHHhHhheeecCccc
Confidence            99999999999999999999988 99999999999999976554333322 23345778999999999999999999999


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      ++||++|.+|||++++
T Consensus       252 ~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          252 YTTGADLLIDGGYTTR  267 (267)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCCEEEECCceecC
Confidence            9999999999999863

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-47  Score=320.25  Aligned_cols=241  Identities=37%  Similarity=0.511  Sum_probs=210.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. .++.++++|++|+++++++++++.+++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999999988888777775 57889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+| ++  .++||++||..+. +.+....|++||++
T Consensus        81 iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~~~~~Y~asK~a  155 (263)
T 2a4k_A           81 LHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAFGLAHYAAGKLG  155 (263)
T ss_dssp             CCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred             CcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence            99999999986 45677889999999999999999999999999999 43  6899999999988 76778899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      ++.|+++++.|++++||+||+|+||+++|++.....+..... .....|.+++.+|+|+|+.++||+++++.+++|+.+.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  234 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQ-EVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY  234 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHH-HHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            999999999999999999999999999999876542221111 1123466889999999999999999988999999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      +|||+++.
T Consensus       235 vdgG~~~~  242 (263)
T 2a4k_A          235 VDGGRSIV  242 (263)
T ss_dssp             ESTTTTTC
T ss_pred             ECCCcccc
Confidence            99998774

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5.3e-48  Score=320.56  Aligned_cols=243  Identities=35%  Similarity=0.470  Sum_probs=213.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++++++++++++++.++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999999888877777663 468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||+++
T Consensus        81 D~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~  158 (254)
T 1hdc_A           81 DGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGV  158 (254)
T ss_dssp             CEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHHHHH
Confidence            9999999986 456778899999999999999999999999999998876 79999999999998888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCC-CHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-KAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.|+++++.|++++||+||+|+||+++|++............ ....|.+++. +|+|+|+.++||+++++.+++|+.|.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  237 (254)
T 1hdc_A          159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELA  237 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHH-HhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEE
Confidence            999999999999999999999999999987532111100000 1123557788 99999999999999988899999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      +|||+++.
T Consensus       238 vdgG~~~~  245 (254)
T 1hdc_A          238 VDGGWTTG  245 (254)
T ss_dssp             ESTTTTTS
T ss_pred             ECCCcccc
Confidence            99998763

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.5e-47  Score=316.65  Aligned_cols=239  Identities=35%  Similarity=0.569  Sum_probs=214.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++. .++.++++|++++++++++++++.+++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999999999999999888877766664 35888999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||++
T Consensus        82 iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  159 (260)
T 1nff_A           82 LHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFA  159 (260)
T ss_dssp             CCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence            99999999986 456778899999999999999999999999999998876 7999999999999888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      ++.|+++++.|++++||++|+|+||+++|++.. ....  .. .  ..|.+++.+|+|+|++++||+++.+.+++|+.+.
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~--~~-~--~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~  233 (260)
T 1nff_A          160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPE--DI-F--QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  233 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCT--TC-S--CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchh--hH-H--hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            999999999999999999999999999999864 1111  11 1  2366788999999999999999988899999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      +|||+++.
T Consensus       234 v~gG~~~~  241 (260)
T 1nff_A          234 VDGGTVAG  241 (260)
T ss_dssp             ESTTGGGS
T ss_pred             ECCCeecc
Confidence            99998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-47  Score=321.57  Aligned_cols=245  Identities=27%  Similarity=0.442  Sum_probs=213.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  ++.++++|++|+++++++++++.++++
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999999999888877766664  378899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+++  .++||++||..+..+.+...+|+++|+
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKG  159 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCCCCcccHHHHH
Confidence            999999999986545678889999999999999999999999999999764  489999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC---ccchHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT---INDVEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++.|+++++.|++++||+||+|+||+++|++....   ........  .....|.+++.+|+|+++.++||+++ +.++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~i  238 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC  238 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCc
Confidence            999999999999999999999999999999975321   11111111  11234778899999999999999997 7899


Q ss_pred             eceEEeeCCCccccc
Q 024839          238 SGHDLVVDGGFTAVT  252 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~  252 (262)
                      ||++|.+|||+++..
T Consensus       239 tG~~i~vdGG~~~~~  253 (270)
T 1yde_A          239 TGIELLVTGGAELGY  253 (270)
T ss_dssp             CSCEEEESTTTTSCC
T ss_pred             CCCEEEECCCeeccc
Confidence            999999999987753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-47  Score=319.09  Aligned_cols=233  Identities=26%  Similarity=0.386  Sum_probs=205.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+....       .++.++++|++|+++++++++++.+++++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-------PDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS-------TTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------CceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            34689999999999999999999999999999999998765322       36889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--CCCCccchhhh
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--GSGPHAYTISK  161 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~~sK  161 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+  ......|++||
T Consensus        97 iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK  174 (260)
T 3un1_A           97 IDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTK  174 (260)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHH
Confidence            99999999987 457888999999999999999999999999999999887 899999999887643  34557899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+||+|+||+++||+....    .........|.+++.+|+|+|++++||  +.+.++||++
T Consensus       175 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~  248 (260)
T 3un1_A          175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE----THSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEI  248 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG----GHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCE
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH----HHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcE
Confidence            9999999999999999999999999999999986431    112222335778999999999999999  4567999999


Q ss_pred             EeeCCCcccc
Q 024839          242 LVVDGGFTAV  251 (262)
Q Consensus       242 i~~dgG~~~~  251 (262)
                      |.+|||+++.
T Consensus       249 i~vdGG~~~~  258 (260)
T 3un1_A          249 LHVDGGQNAG  258 (260)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECCCeecc
Confidence            9999999773

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-47  Score=323.01  Aligned_cols=248  Identities=31%  Similarity=0.407  Sum_probs=214.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--C---ceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--E---KASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~---~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .   ++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998887777666532  2   688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCC----cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-CCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-SGP  154 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~  154 (262)
                      +++++|+||||||+.. ..+    +.+.+.++|++++++|+.+++.++++++|.|++++  ++||++||..+..+. +..
T Consensus        83 ~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSS
T ss_pred             hcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCCCCcc
Confidence            9999999999999863 345    77889999999999999999999999999998654  899999999998887 788


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cc----hHhHHHh--hhcccCCCCCHHHHHHHH
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--ND----VEGFVCK--VANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~----~~~~~~~--~~~~~~~~~~~~~va~~~  226 (262)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++.....  ..    .......  ...|.+++.+|+|+|+.+
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  239 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999999864331  10    0111111  123668899999999999


Q ss_pred             HHHcCCC-CCceeceEEeeCCCcccccCcc
Q 024839          227 LFLASDE-SAYVSGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       227 ~~l~~~~-~~~i~G~~i~~dgG~~~~~~~~  255 (262)
                      +||+++. +.++||+.|.+|||+++..+..
T Consensus       240 ~~l~s~~~~~~~tG~~i~vdgG~~~~~~~~  269 (280)
T 1xkq_A          240 LFLADRNLSFYILGQSIVADGGTSLVMGTQ  269 (280)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCBGGG
T ss_pred             HHhcCcccccCccCCeEEECCCcccccCcc
Confidence            9999987 8899999999999998865553

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-47  Score=316.03  Aligned_cols=238  Identities=21%  Similarity=0.228  Sum_probs=208.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||++|||+++|++|+++|  +.|++++|+.+.++++.++++ .++.++++|++|+++++++++++.++++++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-DRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-GGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            6899999999999999999999985  789999999988888777764 5789999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++  |+||++||..+..+.+....|++||+|++
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~~  158 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAALN  158 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHHHHHH
Confidence            9999999875667888999999999999999999999999999998754  89999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC-CCc
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLKAKHVAEAALFLASDE-SAY  236 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~  236 (262)
                      +|+++++.|+  +||+||+|+||+++|++......        ...........|.+++.+|+|++++++||+++. +.+
T Consensus       159 ~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~  236 (254)
T 3kzv_A          159 HFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDG  236 (254)
T ss_dssp             HHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGG
T ss_pred             HHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCC
Confidence            9999999998  68999999999999999765422        111122223457789999999999999999999 499


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +||++|.+|||...
T Consensus       237 itG~~i~vdg~~~~  250 (254)
T 3kzv_A          237 VNGQYLSYNDPALA  250 (254)
T ss_dssp             GTTCEEETTCGGGG
T ss_pred             CCccEEEecCcccc
Confidence            99999999999753

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-48  Score=326.99  Aligned_cols=243  Identities=29%  Similarity=0.384  Sum_probs=204.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC------------chhHHHHHhhhC--CCceEEEEecCCCH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ------------DELGNQVVSSIG--PEKASYRHCDVRDE   67 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~   67 (262)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.  ..++.++++|++++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            4567899999999999999999999999999999999987            444554444332  25789999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      ++++++++++.++++++|+||||||+... .  .+.+.++|++.+++|+.+++.++++++|+|  ++ .++||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~-~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TS-GASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CT-TCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hc-CcEEEEeccchh
Confidence            99999999999999999999999998633 2  347899999999999999999999999998  23 689999999887


Q ss_pred             cCCC-----------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cchHhH
Q 024839          148 TVGG-----------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDVEGF  205 (262)
Q Consensus       148 ~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~  205 (262)
                      ..+.           +....|++||+++++|+++++.|++++||+||+|+||+++|++.....           ......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            7654           556789999999999999999999999999999999999999875421           111111


Q ss_pred             H----HhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          206 V----CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       206 ~----~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      .    .....| +++.+|+|+|++++||+++.+.++||++|.+|||++++
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            1    111123 78899999999999999999999999999999999874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.5e-47  Score=319.61  Aligned_cols=249  Identities=31%  Similarity=0.451  Sum_probs=214.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++.++++|++|||||++|||+++|++|+++|++|++++|+.+.         ..++.++++|++|+++++++++++.++
T Consensus         1 m~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            1 MGFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             -CCGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            66777899999999999999999999999999999999998764         246789999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|.+++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++|
T Consensus        72 ~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  149 (264)
T 2dtx_A           72 YGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTS  149 (264)
T ss_dssp             HSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHH
Confidence            99999999999986 456788899999999999999999999999999998776 7999999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc------cc----hHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI------ND----VEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      |++++.|+++++.|++++ |+||+|+||+++|++.....      ..    ..........|.+++.+|+|+|++++||+
T Consensus       150 K~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  228 (264)
T 2dtx_A          150 KHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999998 99999999999999754321      00    00011112246688999999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccccCccccccCC
Q 024839          231 SDESAYVSGHDLVVDGGFTAVTNVMSMLEGH  261 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~~~~~~~~~~~  261 (262)
                      ++++.+++|+.|.+|||+++..+..+=-++|
T Consensus       229 s~~~~~~tG~~i~vdGG~~~~~p~~~~~~~~  259 (264)
T 2dtx_A          229 SREASFITGTCLYVDGGLSIRAPISTPELEH  259 (264)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCCCCCCC---
T ss_pred             CchhcCCCCcEEEECCCcccCCCCCCcchhc
Confidence            9988999999999999998766655544443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.9e-48  Score=323.69  Aligned_cols=238  Identities=26%  Similarity=0.307  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-------HHHHHhhhC--CCceEEEEecCCCHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-------GNQVVSSIG--PEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.  ..++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            56889999999999999999999999999999999998753       333333332  257889999999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--CC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--GS  152 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~  152 (262)
                      +++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCC
Confidence            99999999999999999987 457888999999999999999999999999999998877 799999999998877  56


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC-CccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF-GVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      ....|++||+|+++|+++++.|++++||+||+|+|| .++|++......          .+..+..+|+|+|+.++||++
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~----------~~~~~~~~pedvA~~v~~l~s  229 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG----------VDAAACRRPEIMADAAHAVLT  229 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C----------CCGGGSBCTHHHHHHHHHHHT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc----------ccccccCCHHHHHHHHHHHhC
Confidence            778999999999999999999999999999999999 689998632211          123457799999999999999


Q ss_pred             CCCCceeceEEeeCCCcccccCc
Q 024839          232 DESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +.+.++||++| +|||++...+.
T Consensus       230 ~~~~~itG~~i-~~~g~~~~~~~  251 (274)
T 3e03_A          230 REAAGFHGQFL-IDDEVLAQAGI  251 (274)
T ss_dssp             SCCTTCCSCEE-EHHHHHHHTTC
T ss_pred             ccccccCCeEE-EcCcchhhccc
Confidence            99999999999 88887665543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.2e-47  Score=322.37  Aligned_cols=244  Identities=29%  Similarity=0.400  Sum_probs=213.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++++++++++++++.++++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999887776666552  24688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHH--HHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV--MVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++|+||||||+. ...++.+.+.++|.+.+++|+.+++.++++++|.  |++++ .++||++||..+..+.+....|+++
T Consensus        99 ~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 2rhc_B           99 PVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSAS  176 (277)
T ss_dssp             SCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccHHHH
Confidence            999999999986 4567888999999999999999999999999999  88766 7999999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      |++++.|+++++.|++++||+||+|+||+++|++......          ...........|.+++.+|+|+|++++||+
T Consensus       177 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  256 (277)
T 2rhc_B          177 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI  256 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999997543210          000011112246788999999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++++.+++|++|.+|||++.
T Consensus       257 s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          257 GPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CchhcCCCCcEEEECCCccc
Confidence            99888999999999999764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4.7e-47  Score=319.15  Aligned_cols=246  Identities=20%  Similarity=0.229  Sum_probs=213.2

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|+.  +..+++.+...  ++.++++|++++++++++++++.
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHH
Confidence            345789999999988  7799999999999999999999987  44445444443  58899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCC---CCCcCC-CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           79 EKYGSLDIMYSNAGVAGP---VGTILD-LDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      ++++++|+||||||+...   ..++.+ .+.++|.+.+++|+.+++.++++++|.|+++  .++||++||..+..+.+..
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCTTT
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCCCc
Confidence            999999999999998632   144555 8999999999999999999999999999765  5899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|+|++++||++++
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~  256 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM  256 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999987655432 11222223457788999999999999999999


Q ss_pred             CCceeceEEeeCCCccccc
Q 024839          234 SAYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~  252 (262)
                      +.++||++|.+|||+++..
T Consensus       257 ~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          257 ATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             GTTCCSCEEEESTTGGGCC
T ss_pred             cCCcCCcEEEECCCccccC
Confidence            9999999999999998753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-47  Score=324.70  Aligned_cols=245  Identities=29%  Similarity=0.413  Sum_probs=212.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--C---ceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--E---KASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~---~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..  .   ++.++++|++++++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998887776665521  2   68899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCC--cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-CCCc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGT--ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-SGPH  155 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~--~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~  155 (262)
                      ++++++|+||||||+.. ..+  +.+.+.++|++++++|+.+++.++++++|.|++++  |+||++||..+..+. +...
T Consensus       102 ~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~~~~~~  178 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYP  178 (297)
T ss_dssp             HHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSCCTTSH
T ss_pred             HhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCCCCCcc
Confidence            99999999999999863 355  78899999999999999999999999999998764  899999999998887 8889


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cc----hHhHHHh--hhcccCCCCCHHHHHHHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--ND----VEGFVCK--VANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~----~~~~~~~--~~~~~~~~~~~~~va~~~~  227 (262)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++.....  ..    .......  ...|.+++.+|+|+|++++
T Consensus       179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  258 (297)
T 1xhl_A          179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV  258 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999864331  10    0111111  1236678999999999999


Q ss_pred             HHcCCC-CCceeceEEeeCCCcccc
Q 024839          228 FLASDE-SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       228 ~l~~~~-~~~i~G~~i~~dgG~~~~  251 (262)
                      ||++++ +.++||+.|.+|||+++.
T Consensus       259 ~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          259 FLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhCCcccCCccCcEEEECCCcccc
Confidence            999987 889999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.8e-47  Score=316.33  Aligned_cols=242  Identities=30%  Similarity=0.458  Sum_probs=209.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++.  ..++.++++|++|+++++++++++.++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999999999999999876  33333332  24688899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|+
T Consensus        79 ~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           79 GVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHHH
Confidence            999999999986 456778899999999999999999999999999998876 799999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chH---h----HHH-hhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVE---G----FVC-KVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~---~----~~~-~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      +++.|+++++.|++++||+||+|+||+++||+......  ...   .    ... ....|.+++.+|+|+|++++||+++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  236 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE  236 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999998542210  000   0    001 1234668899999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.+++|+.|.+|||+++
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEECCCccC
Confidence            888999999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=6.3e-47  Score=319.59  Aligned_cols=244  Identities=25%  Similarity=0.309  Sum_probs=206.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC---CCceEEEEecCCC----HHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG---PEKASYRHCDVRD----EKQVEETVA   75 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~----~~~i~~~~~   75 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. +..+++.+++.   ..++.++++|+++    +++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            357899999999999999999999999999999999998 77766665542   3578899999999    999999999


Q ss_pred             HHHHHhCCcCEEEeCCcCCCCCCCc-----CC-----CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-----CcEEE
Q 024839           76 YAIEKYGSLDIMYSNAGVAGPVGTI-----LD-----LDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-----RGSII  140 (262)
Q Consensus        76 ~~~~~~~~~d~li~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-----~~~ii  140 (262)
                      ++.+.++++|+||||||+.. ..++     .+     .+.++|.+.+++|+.+++.+++.++|.|++++.     .++||
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            99999999999999999863 3455     56     788999999999999999999999999976531     48999


Q ss_pred             EecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCC-CCH
Q 024839          141 CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV-LKA  219 (262)
Q Consensus       141 ~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~  219 (262)
                      ++||..+..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++ . ......... ....|.+++ .+|
T Consensus       178 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~-~~~~p~~r~~~~p  254 (288)
T 2x9g_A          178 NLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKDKW-RRKVPLGRREASA  254 (288)
T ss_dssp             EECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHHHH-HHTCTTTSSCCCH
T ss_pred             EEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHHHH-HhhCCCCCCCCCH
Confidence            999999999988999999999999999999999999999999999999999998 4 221111111 122466778 899


Q ss_pred             HHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          220 KHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       220 ~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +|+|+.++||+++.+.++||+.|.+|||+++.
T Consensus       255 edvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          255 EQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            99999999999998999999999999998763

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-47  Score=318.49  Aligned_cols=242  Identities=31%  Similarity=0.438  Sum_probs=213.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++++ .++.++++|++|+++++++++++.++++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999999888887777774 578899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++  ++||++||..+..+.+....|++||+++
T Consensus        82 d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (253)
T 1hxh_A           82 NVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             CEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHHHHH
Confidence            9999999986 456788899999999999999999999999999997654  9999999999999988899999999999


Q ss_pred             HHHHHHHHHHHCCC--CcEEEEEeCCCccCCCCCCC-ccchHhHHHhh---hcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          165 LGLVRSAASELGKH--GIRVNCVSPFGVATPFSAGT-INDVEGFVCKV---ANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       165 ~~~~~~la~e~~~~--gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +.|+++++.|++++  ||++|+|+||+++|++.... ...........   ..|.+++.+|+|+|++++||+++++.+++
T Consensus       159 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t  238 (253)
T 1hxh_A          159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS  238 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCC
Confidence            99999999999988  99999999999999975421 11111110111   23667889999999999999999889999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.|.+|||++.
T Consensus       239 G~~~~vdgG~~~  250 (253)
T 1hxh_A          239 GSELHADNSILG  250 (253)
T ss_dssp             SCEEEESSSCTT
T ss_pred             CcEEEECCCccc
Confidence            999999999865

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-48  Score=325.96  Aligned_cols=244  Identities=23%  Similarity=0.245  Sum_probs=213.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++++|++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.    ..++.++++|++|+++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999998   99999999988887776652    357899999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .++++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y  188 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIY  188 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCCchH
Confidence            999999999999999875467888999999999999999999999999999998877 7999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++............... .......+|+|+|++++||+++++.++
T Consensus       189 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~p~~pedvA~~v~~l~s~~~~~i  267 (287)
T 3rku_A          189 CASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNV-YKDTTPLMADDVADLIVYATSRKQNTV  267 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHH-HTTSCCEEHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHh-hcccCCCCHHHHHHHHHHHhCCCCCeE
Confidence            9999999999999999999999999999999999997532211111111111 112335599999999999999999999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      +|+++.+|||...
T Consensus       268 ~g~~i~v~~g~~~  280 (287)
T 3rku_A          268 IADTLIFPTNQAS  280 (287)
T ss_dssp             EEEEEEEETTEEE
T ss_pred             ecceEEeeCCCCC
Confidence            9999999999754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=7e-47  Score=313.08  Aligned_cols=238  Identities=29%  Similarity=0.327  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.     +.   ..+.++++|++|+++++++++++.+++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQ---YPFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SC---CSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hc---CCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999998652     11   12788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++|++
T Consensus        75 id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (250)
T 2fwm_X           75 LDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAA  152 (250)
T ss_dssp             CCEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHHH
Confidence            99999999986 456788899999999999999999999999999998876 7999999999999998889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--Hh-HHHh------hhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--EG-FVCK------VANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~-~~~~------~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++.|+++++.|++++||+||+|+||+++|++........  .. ....      ...|.+++.+|+|+|++++||+++++
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  232 (250)
T 2fwm_X          153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA  232 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999865431110  01 1111      02466788999999999999999988


Q ss_pred             CceeceEEeeCCCcccc
Q 024839          235 AYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~  251 (262)
                      .++||++|.+|||+++.
T Consensus       233 ~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          233 SHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             TTCCSCEEEESTTTTTT
T ss_pred             cCCCCCEEEECCCcccC
Confidence            99999999999998753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=5.2e-47  Score=316.77  Aligned_cols=243  Identities=24%  Similarity=0.335  Sum_probs=210.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++.+|++|||||++|||+++|++|+++|++|++. .|+.+..++..+++.  ..++.++++|++++++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999664 566666666655542  25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||+. ...++.+.+.++|++.+++|+.+++.+++.+++.|.++...++||++||..+..+.+....|++
T Consensus       101 ~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIA-RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSA  179 (267)
T ss_dssp             HHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HhCCccEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHH
Confidence            999999999999987 4578888999999999999999999999999999874333799999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|++.|+++++.|++++||+|++|+||+++|++.........  ......|.+++.+|+|+++++.||+++++.++||
T Consensus       180 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG  257 (267)
T 4iiu_A          180 AKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALK--EAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTR  257 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHH--HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHH--HHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccC
Confidence            99999999999999999999999999999999999765522222  2222347788999999999999999999999999


Q ss_pred             eEEeeCCCc
Q 024839          240 HDLVVDGGF  248 (262)
Q Consensus       240 ~~i~~dgG~  248 (262)
                      ++|.+|||+
T Consensus       258 ~~i~vdGG~  266 (267)
T 4iiu_A          258 QVISINGGM  266 (267)
T ss_dssp             CEEEESTTC
T ss_pred             CEEEeCCCc
Confidence            999999997

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-47  Score=323.13  Aligned_cols=238  Identities=24%  Similarity=0.273  Sum_probs=208.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-------HHHHHhhhC--CCceEEEEecCCCHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-------GNQVVSSIG--PEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   72 (262)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.  ..++.++++|++|++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            4567899999999999999999999999999999999998763       344444432  2578999999999999999


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-  151 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-  151 (262)
                      +++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+. 
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~  160 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKW  160 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCC
Confidence            9999999999999999999987 557888999999999999999999999999999998876 7999999999988875 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCC-CccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPF-GVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +....|++||+|+++|+++++.|++++||+||+|+|| .+.|++....        .....+.++..+|+|+|++++||+
T Consensus       161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~--------~~~~~~~~r~~~pedvA~~~~~l~  232 (285)
T 3sc4_A          161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL--------LGGDEAMARSRKPEVYADAAYVVL  232 (285)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH--------HTSCCCCTTCBCTHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh--------ccccccccCCCCHHHHHHHHHHHh
Confidence            6778999999999999999999999999999999999 6888764221        111235678899999999999999


Q ss_pred             CCCCCceeceEEeeCCCccc
Q 024839          231 SDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++++ ++||+.+.+|||+..
T Consensus       233 s~~~-~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          233 NKPS-SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             TSCT-TCCSCEEEHHHHHHH
T ss_pred             CCcc-cccceEEEEcCchhc
Confidence            9988 999999999999764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-46  Score=323.17  Aligned_cols=242  Identities=24%  Similarity=0.241  Sum_probs=209.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhC---CCceEEEEecCCCHH------------
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIG---PEKASYRHCDVRDEK------------   68 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~------------   68 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.   ..++.++++|+++++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            37899999999999999999999999999999999 99887777766653   357889999999999            


Q ss_pred             -----HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCC--------------HHHHHHHHHHHhhHHHHHHHHHHHH
Q 024839           69 -----QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLD--------------MAQFDRTIATNLAGSVMAVKYAARV  129 (262)
Q Consensus        69 -----~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~nv~~~~~l~~~~~~~  129 (262)
                           +++++++++.++++++|+||||||+. ...++.+.+              .++|.+++++|+.+++.++++++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999986 446777788              8999999999999999999999999


Q ss_pred             HHhCCC-----CcEEEEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh
Q 024839          130 MVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG  204 (262)
Q Consensus       130 ~~~~~~-----~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~  204 (262)
                      |++++.     .++||++||..+..+.+....|++||++++.|+++|+.|++++||+||+|+||+++|++ ... +....
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-~~~~~  279 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-PAVWE  279 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-HHHHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-HHHHH
Confidence            987541     48999999999999988999999999999999999999999999999999999999998 332 21111


Q ss_pred             HHHhhhcccC-CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          205 FVCKVANLKG-IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       205 ~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      .. ....|.+ ++.+|+|+|++++||+++.+.++||++|.+|||+++
T Consensus       280 ~~-~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          280 GH-RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HH-HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HH-HhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            11 1223666 889999999999999998889999999999999876

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.7e-47  Score=315.51  Aligned_cols=235  Identities=22%  Similarity=0.256  Sum_probs=200.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-----CCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     ...++.++++|++++++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998887776665     2257889999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .++++++|+||||||+. ...++ +.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|
T Consensus        82 ~~~~g~iD~lvnnAg~~-~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  158 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMF-MDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIY  158 (250)
T ss_dssp             HHHHCCEEEEEECCCCC-CCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHH
T ss_pred             HHhcCCCCEEEECCCcC-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcch
Confidence            99999999999999986 34555 788999999999999999999999999998877 7999999999999877778999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC-c
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA-Y  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~-~  236 (262)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++......         ..+.+++.+|+|++++++||+++++. +
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~~~~  229 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSENVC  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC---------CcccccCCCHHHHHHHHHHHHcCCCceE
Confidence            9999999999999999999999999999999999987543221         12446688999999999999997655 6


Q ss_pred             eeceEEeeCCCcc
Q 024839          237 VSGHDLVVDGGFT  249 (262)
Q Consensus       237 i~G~~i~~dgG~~  249 (262)
                      +++..|.+|||..
T Consensus       230 ~~~~~i~vd~~~~  242 (250)
T 3nyw_A          230 IKDIVFEMKKSII  242 (250)
T ss_dssp             CCEEEEEEHHHHH
T ss_pred             eeEEEEEeecccc
Confidence            7788899999964

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=6.9e-47  Score=318.21  Aligned_cols=243  Identities=29%  Similarity=0.427  Sum_probs=213.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++++++++++++++ ++++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~-~~~~  102 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-NRAEFVSTNVTSEDSVLAAIEAA-NQLG  102 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHH-TTSS
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHH-HHhC
Confidence            456889999999999999999999999999999999999999888888885 57899999999999999999999 7889


Q ss_pred             CcCEEEeCCcCCCCCCCc-----CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh------CCCCcEEEEecCCCccCCC
Q 024839           83 SLDIMYSNAGVAGPVGTI-----LDLDMAQFDRTIATNLAGSVMAVKYAARVMVA------NKIRGSIICTTSTASTVGG  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~------~~~~~~ii~isS~~~~~~~  151 (262)
                      ++|++|||++.......+     .+.+.++|.+.+++|+.+++.+++.+++.|.+      ++ .|+||++||..+..+.
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~  181 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGE-RGALVLTASIAGYEGQ  181 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSC-CEEEEEECCGGGTSCC
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCC-CeEEEEEecccccCCC
Confidence            999999994433333433     36889999999999999999999999999987      33 7899999999999999


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHHHHHHHHc
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLA  230 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  230 (262)
                      +....|++||+|+++|+++++.|++++||+|++|+||+++|++............... .+. +++.+|+|+|++++||+
T Consensus       182 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~pedvA~~v~~l~  260 (281)
T 3ppi_A          182 IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAAN-IPFPKRLGTPDEFADAAAFLL  260 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHT-CCSSSSCBCHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998766544333333322 344 78999999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccc
Q 024839          231 SDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++  .++||++|.+|||++++
T Consensus       261 s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          261 TN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HC--SSCCSCEEEESTTCCCC
T ss_pred             cC--CCcCCcEEEECCCcccC
Confidence            85  68999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=8.4e-47  Score=316.88  Aligned_cols=240  Identities=25%  Similarity=0.317  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC---CCceEEEEecCCCH----HHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG---PEKASYRHCDVRDE----KQVEETVAY   76 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~----~~i~~~~~~   76 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.   ..++.++++|++++    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            467999999999999999999999999999999999 8777776666552   35788999999999    999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCH-----------HHHHHHHHHHhhHHHHHHHHHHHHHHhCCCC------cEE
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDM-----------AQFDRTIATNLAGSVMAVKYAARVMVANKIR------GSI  139 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~------~~i  139 (262)
                      +.++++++|+||||||+. ...++.+.+.           ++|++++++|+.+++.++++++|.|+ ++ .      ++|
T Consensus        88 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g~i  164 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNLSV  164 (276)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEE
T ss_pred             HHHhcCCCCEEEECCCCC-CCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCcEE
Confidence            999999999999999986 4467777888           99999999999999999999999987 44 4      899


Q ss_pred             EEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCC-CCC
Q 024839          140 ICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI-VLK  218 (262)
Q Consensus       140 i~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~  218 (262)
                      |++||..+..+.+....|++||++++.|+++++.|++++||+||+|+||+++|| . ......... .....|.++ +.+
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~-~~~~~p~~r~~~~  241 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQETQEE-YRRKVPLGQSEAS  241 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHHHHH-HHTTCTTTSCCBC
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHHHHH-HHhcCCCCCCCCC
Confidence            999999999998899999999999999999999999999999999999999999 2 222111111 112246677 899


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+|++++++||+++.+.++||++|.+|||+++
T Consensus       242 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            99999999999998889999999999999865

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=3.2e-47  Score=315.57  Aligned_cols=236  Identities=30%  Similarity=0.447  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ..++.+|++|||||++|||+++|++|+++|++|++++|+.+.++         .+.++++|++|+++++++++++.++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34678999999999999999999999999999999999876542         267899999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++|+
T Consensus        87 ~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  164 (253)
T 2nm0_A           87 PVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKA  164 (253)
T ss_dssp             SCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHHHHHHHH
Confidence            999999999986 456778889999999999999999999999999998876 799999999999888777889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.|+++++.|++++||+||+|+||+++|++........... .....|.+++.+|+|+|+.++||+++++.+++|+.|
T Consensus       165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i  243 (253)
T 2nm0_A          165 GLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRAN-IVSQVPLGRYARPEEIAATVRFLASDDASYITGAVI  243 (253)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHH-HHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEE
Confidence            9999999999999999999999999999999865432211111 112236678999999999999999998899999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       244 ~vdGG~~~  251 (253)
T 2nm0_A          244 PVDGGLGM  251 (253)
T ss_dssp             EESTTTTC
T ss_pred             EECCcccc
Confidence            99999865

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.1e-47  Score=315.80  Aligned_cols=246  Identities=24%  Similarity=0.256  Sum_probs=210.2

Q ss_pred             CCCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVA   75 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   75 (262)
                      |+..++++|++|||||+  +|||+++|++|+++|++|++++|+.+   ..+++.+..+  .+.++++|++++++++++++
T Consensus         1 M~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~   78 (261)
T 2wyu_A            1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELDALFA   78 (261)
T ss_dssp             CEEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHH
Confidence            66677899999999999  99999999999999999999999875   2223322222  37889999999999999999


Q ss_pred             HHHHHhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC
Q 024839           76 YAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS  152 (262)
Q Consensus        76 ~~~~~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~  152 (262)
                      ++.++++++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..+.+
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~  155 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVP  155 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCT
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCC
Confidence            999999999999999997632   256778999999999999999999999999998853   48999999999998888


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      ....|++||++++.|+++++.|++++||+||+|+||+++|++........ .........|.+++.+|+|++++++||++
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s  235 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS  235 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            88999999999999999999999999999999999999999865432111 11111123467889999999999999999


Q ss_pred             CCCCceeceEEeeCCCcccc
Q 024839          232 DESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +.+.++||+.|.+|||+++.
T Consensus       236 ~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          236 PLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             hhhcCCCCCEEEECCCcccc
Confidence            88899999999999998774

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.3e-46  Score=311.03  Aligned_cols=236  Identities=27%  Similarity=0.378  Sum_probs=199.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..++         +..+++|++|+++++++++++.++++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---------LFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---------SEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---------hcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999999998765432         22489999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++||+
T Consensus        81 ~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           81 PVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             SCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCCCChhHHHHHH
Confidence            999999999986 456778899999999999999999999999999998876 799999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.|+++++.|++++||+||+|+||+++|++.......... ......|.+++.+|+|+|+.++||+++++.+++|++|
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i  237 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQ-GALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHH-HHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHH-HHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEE
Confidence            999999999999999999999999999999985432221111 1112246678999999999999999988899999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+|||+++
T Consensus       238 ~vdgG~~~  245 (247)
T 1uzm_A          238 PVDGGMGM  245 (247)
T ss_dssp             EESTTTTC
T ss_pred             EECCCccc
Confidence            99999865

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=315.55  Aligned_cols=245  Identities=33%  Similarity=0.423  Sum_probs=203.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GP--EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++   ..  .++.++++|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988887776665   32  4688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCC----CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-cCCCCCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDL----DMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-TVGGSGP  154 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~  154 (262)
                      +++++|+||||||.. ...++.+.    +.++|++.+++|+.+++.++++++|.|++++  ++||++||..+ ..+.+..
T Consensus        83 ~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAA-IPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCC-CCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCCCc
Confidence            999999999999986 34566677    9999999999999999999999999998754  89999999998 8888888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---ch---H--hHHHhhhcccCCCCCHHHHHHHH
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DV---E--GFVCKVANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~---~--~~~~~~~~~~~~~~~~~~va~~~  226 (262)
                      ..|++||++++.|+++++.|++++||++|+|+||+++|++......   ..   .  ........|.+++.+|+|+|+++
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  239 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999998654211   11   0  01111223668899999999999


Q ss_pred             HHHcCCCCCc-eeceEEeeCCCccccc
Q 024839          227 LFLASDESAY-VSGHDLVVDGGFTAVT  252 (262)
Q Consensus       227 ~~l~~~~~~~-i~G~~i~~dgG~~~~~  252 (262)
                      +||+++++.+ +||+++.+|||++++.
T Consensus       240 ~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          240 AFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             HHHcCccccCcccCcEEEECCCccccc
Confidence            9999987776 9999999999987643

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-47  Score=316.02  Aligned_cols=246  Identities=23%  Similarity=0.236  Sum_probs=207.0

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHH---HHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQ---VVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+.   +.+..  .++.++++|++++++++++++++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHH
Confidence            45789999999999  999999999999999999999988543332   22222  357899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCC---CCcCC-CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           79 EKYGSLDIMYSNAGVAGPV---GTILD-LDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~---~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      ++++++|+||||||+....   .++.+ .+.++|.+++++|+.+++.++++++|.|++   .++||++||..+..+.+..
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTT
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCCCCc
Confidence            9999999999999986421   45555 899999999999999999999999998853   5899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++....... ..........|.+++.+|+|+|+.++||+++.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~  244 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDL  244 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999997765321 11122223357788999999999999999998


Q ss_pred             CCceeceEEeeCCCcccccCc
Q 024839          234 SAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +.++||++|.+|||++++...
T Consensus       245 ~~~~tG~~i~vdgG~~~~~~~  265 (271)
T 3ek2_A          245 ASGVTAEVMHVDSGFNAVVGG  265 (271)
T ss_dssp             GTTCCSEEEEESTTGGGBCCC
T ss_pred             cCCeeeeEEEECCCeeeehhh
Confidence            999999999999999886544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-46  Score=310.57  Aligned_cols=239  Identities=28%  Similarity=0.438  Sum_probs=197.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++.+|+++.++++++++++    ++
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~----~~   84 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLANKEECSNLISKT----SN   84 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHTC----SC
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-cCccEEEcCCCCHHHHHHHHHhc----CC
Confidence            45789999999999999999999999999999999999998888887776 47889999999999998877643    78


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.+....|++||+|
T Consensus        85 id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  162 (249)
T 3f9i_A           85 LDILVCNAGIT-SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAG  162 (249)
T ss_dssp             CSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHHHHHH
Confidence            99999999987 346667888999999999999999999999999998876 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +++|+++++.|++++||++++|+||+++|++........... .....|.+++.+|+|++++++||+++++.++||++|.
T Consensus       163 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  241 (249)
T 3f9i_A          163 LIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREA-IVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLH  241 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHH-HHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            999999999999999999999999999999977654332222 2233477889999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+++
T Consensus       242 vdgG~~~  248 (249)
T 3f9i_A          242 VNGGMLM  248 (249)
T ss_dssp             ESTTSSC
T ss_pred             ECCCEee
Confidence            9999876

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.6e-47  Score=316.93  Aligned_cols=242  Identities=22%  Similarity=0.222  Sum_probs=207.3

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|++|||||  ++|||+++|++|+++|++|++++|+.+. .+++.+++. .++.++++|++++++++++++++.++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC-CCceEEEccCCCHHHHHHHHHHHHHH
Confidence            4588999999999  9999999999999999999999998766 455555554 46789999999999999999999999


Q ss_pred             hC---CcCEEEeCCcCCCC----CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC
Q 024839           81 YG---SLDIMYSNAGVAGP----VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        81 ~~---~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~  153 (262)
                      ++   ++|+||||||+...    ..++.+.+.++|.+.+++|+.+++.++++++|+|++   .|+||++||..+ .+.+.
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~~~~~  157 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-RAMPA  157 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-SCCTT
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-cccCc
Confidence            99   99999999998632    367788999999999999999999999999999853   489999999876 66677


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC----ccch-H----hH--HHhhhcccC-CCCCHHH
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT----INDV-E----GF--VCKVANLKG-IVLKAKH  221 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----~~~~-~----~~--~~~~~~~~~-~~~~~~~  221 (262)
                      +..|++||+++++|+++++.|++++||+||+|+||+++|++....    ..+. .    ..  ......|.+ ++.+|+|
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~d  237 (269)
T 2h7i_A          158 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP  237 (269)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHH
Confidence            889999999999999999999999999999999999999975321    0110 0    00  111234667 6999999


Q ss_pred             HHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          222 VAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       222 va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +|++++||+++.+.++||+.|.+|||+++
T Consensus       238 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          238 VAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHhCchhccCcceEEEecCCeee
Confidence            99999999999999999999999999876

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-47  Score=312.17  Aligned_cols=238  Identities=34%  Similarity=0.506  Sum_probs=203.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++++++. ++.  ++.++++|++++++++    ++.+++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~--~~~~~~~D~~~~~~~~----~~~~~~~~   74 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP--GIQTRVLDVTKKKQID----QFANEVER   74 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST--TEEEEECCTTCHHHHH----HHHHHCSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc--CceEEEeeCCCHHHHH----HHHHHhCC
Confidence            3578999999999999999999999999999999999987766554 332  6889999999999987    44556789


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-CCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~  162 (262)
                      +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+ ....|++||+
T Consensus        75 id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           75 LDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKA  152 (246)
T ss_dssp             CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             CCEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHHHH
Confidence            99999999986 446778899999999999999999999999999998876 79999999999888777 7889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---chHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DVEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++.|+++++.|++++||++|+|+||+++||+......   ......  .....|.+++.+|+|+|+.++||+++++.++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  232 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV  232 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999997532110   001111  1112366789999999999999999989999


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      ||+.|.+|||+++
T Consensus       233 tG~~i~vdgG~~~  245 (246)
T 2ag5_A          233 TGNPVIIDGGWSL  245 (246)
T ss_dssp             CSCEEEECTTGGG
T ss_pred             CCCEEEECCCccC
Confidence            9999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.4e-47  Score=327.01  Aligned_cols=244  Identities=29%  Similarity=0.428  Sum_probs=210.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC----------chhHHHHHhhhC--CCceEEEEecCCCHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ----------DELGNQVVSSIG--PEKASYRHCDVRDEKQV   70 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~----------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i   70 (262)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+          .+..++..+++.  ..++.++++|++|++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            456889999999999999999999999999999999987          555666655553  25788999999999999


Q ss_pred             HHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-----CCcEEEEecCC
Q 024839           71 EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-----IRGSIICTTST  145 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-----~~~~ii~isS~  145 (262)
                      +++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.+++++.|+|.+.+     ..|+||++||.
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIV-RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            999999999999999999999987 456888999999999999999999999999999997532     13799999999


Q ss_pred             CccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHH
Q 024839          146 ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA  225 (262)
Q Consensus       146 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  225 (262)
                      .+..+.+....|++||+|+++|+++++.|++++||+||+|+|| +.|++...........    .....+..+|+|++++
T Consensus       181 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~----~~~~~~~~~pedva~~  255 (322)
T 3qlj_A          181 AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT----QDQDFDAMAPENVSPL  255 (322)
T ss_dssp             HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------CCTTCGGGTHHH
T ss_pred             HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc----cccccCCCCHHHHHHH
Confidence            9999988999999999999999999999999999999999999 9999876654332211    1122356799999999


Q ss_pred             HHHHcCCCCCceeceEEeeCCCccccc
Q 024839          226 ALFLASDESAYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~dgG~~~~~  252 (262)
                      ++||+++.+.++||++|.+|||+++..
T Consensus       256 v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          256 VVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             HHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             HHHHhCccccCCCCCEEEECCCccccC
Confidence            999999999999999999999987743

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-46  Score=311.83  Aligned_cols=239  Identities=21%  Similarity=0.310  Sum_probs=199.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.++++++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999999988887777663  2578899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|.+++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++||+|+
T Consensus        83 D~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           83 DVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            9999999986 567888999999999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      ++|+++++.|+ + ||+||+|+||+++|++..............  .......+|+|+|++++||+++++.+++|+.+..
T Consensus       161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~  236 (264)
T 3tfo_A          161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMD--TYRAIALQPADIARAVRQVIEAPQSVDTTEITIR  236 (264)
T ss_dssp             HHHHHHHHHHC-S-SEEEEEEEECCC-------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCccCccceEEEe
Confidence            99999999998 4 999999999999999876543222111111  1123357999999999999999999999999999


Q ss_pred             CCCcccc
Q 024839          245 DGGFTAV  251 (262)
Q Consensus       245 dgG~~~~  251 (262)
                      ++|+.+-
T Consensus       237 p~~~~~~  243 (264)
T 3tfo_A          237 PTASGNA  243 (264)
T ss_dssp             ECC----
T ss_pred             cCccccc
Confidence            9998763

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.6e-46  Score=311.26  Aligned_cols=237  Identities=25%  Similarity=0.244  Sum_probs=194.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.++
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            456889999999999999999999999999999999999998887777663  257899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++|
T Consensus        82 -g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           82 -APLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             -SCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             -CCceEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHHH
Confidence             9999999999987 457888999999999999999999999999999999877 7999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEE-EEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRV-NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v-~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+|+++|+++++.|++++||+| |+|+||+++|++............. ...|.+ +.+|+|+|+.++||++++..+++|
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~  236 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDA-LANPDL-LMPPAAVAGAYWQLYQQPKSAWTF  236 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhh-hcCCcc-CCCHHHHHHHHHHHHhCchhccee
Confidence            9999999999999999999999 9999999999998765333222111 123445 899999999999999988888999


Q ss_pred             eEEee
Q 024839          240 HDLVV  244 (262)
Q Consensus       240 ~~i~~  244 (262)
                      +...-
T Consensus       237 ~i~~~  241 (252)
T 3h7a_A          237 EMEIR  241 (252)
T ss_dssp             EEEEB
T ss_pred             eEEee
Confidence            97654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.3e-46  Score=311.93  Aligned_cols=242  Identities=27%  Similarity=0.348  Sum_probs=194.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |.++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. .++.++++|++|+++++++++++.++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            445789999999999999999999999999999999999999888888876 5789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCccCCCCCCccchhhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|++++. .|+||++||..+..+.+....|++||
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  181 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK  181 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence            99999999998755578889999999999999999999999999999987642 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+++|+++++.|++++||+||+|+||+++|++............  ...+.+++.+|+|+|++++||++.+.....++.
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i  259 (272)
T 4dyv_A          182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQAD--LSIKVEPVMDVAHVASAVVYMASLPLDANVQFM  259 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred             HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhh--hcccccCCCCHHHHHHHHHHHhCCCCcCccceE
Confidence            999999999999999999999999999999998765533322211  123557789999999999999997766544444


Q ss_pred             EeeCCC
Q 024839          242 LVVDGG  247 (262)
Q Consensus       242 i~~dgG  247 (262)
                      .....+
T Consensus       260 ~i~~~~  265 (272)
T 4dyv_A          260 TIMATK  265 (272)
T ss_dssp             EEEEC-
T ss_pred             EEeccC
Confidence            433333

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.9e-46  Score=307.39  Aligned_cols=234  Identities=29%  Similarity=0.372  Sum_probs=204.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.++.   .++++   +.++++|+++ ++++++++++.+.++++|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~---~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSLG---AVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHT---CEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhhC---cEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999997763   23332   7789999999 99999999999999999999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--CCCccchhhhHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPHAYTISKHGLL  165 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~sK~a~~  165 (262)
                      |||||.. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .++||++||..+..+.  +....|++||++++
T Consensus        75 v~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~  152 (239)
T 2ekp_A           75 VHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL  152 (239)
T ss_dssp             EECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred             EECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence            9999986 456788899999999999999999999999999998876 7999999999988877  78889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      .|+++++.|++++||++|+|+||+++|++..... ............|.+++.+|+|+|+.++||+++++.++||+.+.+
T Consensus       153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~v  232 (239)
T 2ekp_A          153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV  232 (239)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEE
Confidence            9999999999999999999999999999854321 011101111224667899999999999999999889999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+++
T Consensus       233 dgG~~~  238 (239)
T 2ekp_A          233 DGGFLA  238 (239)
T ss_dssp             STTTTT
T ss_pred             CCCccc
Confidence            999864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2e-46  Score=313.99  Aligned_cols=242  Identities=26%  Similarity=0.316  Sum_probs=201.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+|++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+++.  ..++.++++|++|+++++++++++.+++++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            48999999999999999999999999999876 677776666655552  257899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC--CCCcEEEEecCCCccCCCC-CCccchhh
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN--KIRGSIICTTSTASTVGGS-GPHAYTIS  160 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~--~~~~~ii~isS~~~~~~~~-~~~~Y~~s  160 (262)
                      +|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|.|++.  +..++||++||..+..+.+ .+..|++|
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  184 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAAS  184 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHH
Confidence            99999999987555788899999999999999999999999999999763  2268999999999887765 66789999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|++.|+++++.|++++||+|++|+||+++|++.................|.++..+|+|+|++++||+++.+.++||+
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~  264 (272)
T 4e3z_A          185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGS  264 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCC
Confidence            99999999999999999999999999999999987653222111122223466888899999999999999999999999


Q ss_pred             EEeeCCCc
Q 024839          241 DLVVDGGF  248 (262)
Q Consensus       241 ~i~~dgG~  248 (262)
                      +|.+|||+
T Consensus       265 ~i~vdgG~  272 (272)
T 4e3z_A          265 ILNVSGGR  272 (272)
T ss_dssp             EEEESTTC
T ss_pred             EEeecCCC
Confidence            99999995

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.5e-46  Score=316.54  Aligned_cols=242  Identities=26%  Similarity=0.365  Sum_probs=206.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-HHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-GNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++.  ..++.++++|++++++++++++++.+.+
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999998654 333333332  2478899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-Cccchhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-PHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~s  160 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|  ++ .|+||++||..+..+.+. ...|++|
T Consensus       106 g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~-~g~iv~isS~~~~~~~~~~~~~Y~as  181 (283)
T 1g0o_A          106 GKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EI-GGRLILMGSITGQAKAVPKHAVYSGS  181 (283)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CT-TCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hc-CCeEEEEechhhccCCCCCCcchHHH
Confidence            9999999999986 45678889999999999999999999999999998  33 689999999998877654 8899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----------cchHhHHHh-hhcccCCCCCHHHHHHHHHH
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----------NDVEGFVCK-VANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~va~~~~~  228 (262)
                      |+++++|+++++.|++++||+||+|+||+++|++.....           .+....... ...|.+++.+|+|+|++++|
T Consensus       182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  261 (283)
T 1g0o_A          182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999743210           111111111 03477889999999999999


Q ss_pred             HcCCCCCceeceEEeeCCCccc
Q 024839          229 LASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++.+.++||++|.+|||+++
T Consensus       262 l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          262 LASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCcCCCEEEeCCCccC
Confidence            9999889999999999999753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.3e-46  Score=312.11  Aligned_cols=241  Identities=28%  Similarity=0.351  Sum_probs=211.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++.  ..++.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999885 677776666665553  25788999999999999999999988764


Q ss_pred             ------CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           83 ------SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        83 ------~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                            ++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|+  + .++||++||..+..+.+....
T Consensus        85 ~~~~~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~~~iv~isS~~~~~~~~~~~~  160 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--D-NSRIINISSAATRISLPDFIA  160 (255)
T ss_dssp             HHHSSSCEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--E-EEEEEEECCGGGTSCCTTBHH
T ss_pred             ccccCCcccEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--C-CCEEEEeCChhhccCCCCcch
Confidence                  499999999986 557788899999999999999999999999999883  2 589999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++......... ........+.+++.+|+|+++++.||+++++.
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  240 (255)
T 3icc_A          161 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSR  240 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999999876644321 22233345778899999999999999999999


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ++||++|.+|||++|
T Consensus       241 ~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          241 WVTGQLIDVSGGSCL  255 (255)
T ss_dssp             TCCSCEEEESSSTTC
T ss_pred             CccCCEEEecCCeeC
Confidence            999999999999865

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=8.6e-46  Score=312.21  Aligned_cols=243  Identities=23%  Similarity=0.283  Sum_probs=206.9

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+   ..+++.+..+  .+.++++|++++++++++++++.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999875   2222222222  367899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|+++  .|+||++||..+..+.+....
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  173 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVPHYNV  173 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCTTTTH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCCCccH
Confidence            99999999999998632   2567789999999999999999999999999998653  589999999999988888899


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+++++|+++++.|++++||+||+|+||+++|++......... ........|.+++.+|+|+|+.++||+++.+.
T Consensus       174 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~  253 (285)
T 2p91_A          174 MGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR  253 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccc
Confidence            99999999999999999999999999999999999998654321111 11111234668889999999999999998889


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      +++|+.+.+|||+++.
T Consensus       254 ~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          254 AITGEVVHVDNGYHIM  269 (285)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998774

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=6.1e-46  Score=310.09  Aligned_cols=240  Identities=23%  Similarity=0.254  Sum_probs=212.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++.    ...++.++++|++|+++++++++++.+.++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----hcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            46799999999999999999999999999999999998765543    22468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|++||+++
T Consensus        89 D~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK~a~  166 (266)
T 3p19_A           89 DAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAV  166 (266)
T ss_dssp             EEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCCCCchHHHHHHHH
Confidence            9999999987 457888999999999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      ++|+++++.|++++||+||+|+||+++|++......... ........|.+++.+|+|+|++++|+++++..+++++.+.
T Consensus       167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i  246 (266)
T 3p19_A          167 HAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIAL  246 (266)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccceeeEE
Confidence            999999999999999999999999999999765543221 2222223477899999999999999999999999999988


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      .+.++..
T Consensus       247 ~p~~~~~  253 (266)
T 3p19_A          247 APTKQQP  253 (266)
T ss_dssp             EETTCCC
T ss_pred             ecCCCCC
Confidence            8887653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.4e-46  Score=312.44  Aligned_cols=244  Identities=21%  Similarity=0.250  Sum_probs=206.0

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCc---hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|+.   +..+++.+...  ...++++|++++++++++++++
T Consensus         4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T 1qsg_A            4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAEL   81 (265)
T ss_dssp             -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHH
Confidence            334889999999999  9999999999999999999999987   22223322222  3478999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCC---CCCcCC-CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAGP---VGTILD-LDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~  153 (262)
                      .++++++|+||||||+...   ..++.+ .+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..+.+.
T Consensus        82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~  158 (265)
T 1qsg_A           82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPN  158 (265)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTT
T ss_pred             HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCCC
Confidence            9999999999999997632   256667 899999999999999999999999998853   489999999999988888


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++......... ........|.+++.+|+|++++++||+++
T Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~  238 (265)
T 1qsg_A          159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD  238 (265)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999999998654321111 11111224668899999999999999998


Q ss_pred             CCCceeceEEeeCCCcccc
Q 024839          233 ESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~~  251 (262)
                      .+.++||+.|.+|||+++.
T Consensus       239 ~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          239 LSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             GGTTCCSCEEEESTTGGGB
T ss_pred             hhcCccCCEEEECCCcCCC
Confidence            8899999999999998774

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.2e-45  Score=306.91  Aligned_cols=248  Identities=31%  Similarity=0.408  Sum_probs=213.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.  ..++.++++|++|+++++++++++.+
T Consensus         7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999887766655542  24788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccc
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAY  157 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y  157 (262)
                      +++++|+||||||......++.+.+.++|.+.+++|+.+++.+++++.|.|++++ .++||++||..+..+.+..  ..|
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~Y  165 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAY  165 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCcccc
Confidence            9999999999999864356778899999999999999999999999999998766 7999999999988777666  899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC-CCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA-GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +++|++++.|+++++.|++++||++++|+||+++|++.. ...............|.+++.+|+|+++++.+++++.+.+
T Consensus       166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  245 (260)
T 3awd_A          166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASL  245 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhcc
Confidence            999999999999999999999999999999999999865 2111111111112236678899999999999999988889


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      ++|+.+.+|||+++
T Consensus       246 ~~G~~~~v~gg~~~  259 (260)
T 3awd_A          246 MTGAIVNVDAGFTV  259 (260)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCcEEEECCceec
Confidence            99999999999753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.3e-45  Score=305.19  Aligned_cols=245  Identities=30%  Similarity=0.443  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .++.++++|++++++++++++.+.++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999998887777666643 4788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCC-cEEEEecCCCccCCCCCCccchhhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIR-GSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      ++|+||||||.. ...++.+.+.++|.+++++|+.+++.+++.++|.|++++ . ++||++||..+..+.+....|+++|
T Consensus        82 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           82 PVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCCCCccchHHH
Confidence            999999999986 456778899999999999999999999999999998766 4 8999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          162 HGLLGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       162 ~a~~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ++++.|+++++.|++  ++||++++++||+++|++.................|.+++.+|+|+++.+++++++.+.+++|
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  239 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccC
Confidence            999999999999998  889999999999999998654322111111112236678899999999999999988889999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      +.+.+|||+++
T Consensus       240 ~~~~v~gG~~~  250 (251)
T 1zk4_A          240 SEFVVDGGYTA  250 (251)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECCCccC
Confidence            99999999875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=9.2e-47  Score=313.07  Aligned_cols=242  Identities=21%  Similarity=0.209  Sum_probs=206.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |++|||||++|||+++|++|+++|++|++++|+.+..+++.+ +.  ..++..+     |+++++++++++.++++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999877665543 31  1234333     667788999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||+++++
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999863456788899999999999999999999999999998876 7999999999999998889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCc---------cCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGV---------ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      |+++++.|++++||+||+|+||++         +|++..... ..... .....|.+++.+|+|+|+.++||+++.+.++
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~-~~~~~-~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  232 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNP-EHVAH-VKKVTALQRLGTQKELGELVAFLASGSCDYL  232 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCH-HHHHH-HHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccCh-HHHHH-HhccCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            999999999999999999999999         666543221 11111 1122466889999999999999999988999


Q ss_pred             eceEEeeCCCcccccCcccccc
Q 024839          238 SGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      ||+.|.+|||+++...++++||
T Consensus       233 tG~~~~vdgG~~~~~~~~~~~~  254 (254)
T 1zmt_A          233 TGQVFWLAGGFPMIERWPGMPE  254 (254)
T ss_dssp             TTCEEEESTTCCCCCCCTTCC-
T ss_pred             cCCEEEECCCchhhccCCCCCC
Confidence            9999999999999888998886

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=9.8e-46  Score=310.33  Aligned_cols=242  Identities=21%  Similarity=0.243  Sum_probs=207.4

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+   ..+++.+..+  .+.++++|++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            4779999999999  99999999999999999999999875   2233322222  378899999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC---CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +++++|+||||||+...   ..++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+..+.+....
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~  157 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNV  157 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCCCchh
Confidence            99999999999998632   257778999999999999999999999999999853   489999999999998888999


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |++||+++++|+++++.|++++||+||+|+||+++|++......... ........|.+++.+|+|+|+.++||+++.+.
T Consensus       158 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~  237 (275)
T 2pd4_A          158 MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSS  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999998654321111 11111234668889999999999999998889


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      +++|+.+.+|||+++.
T Consensus       238 ~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          238 GVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCCEEEECCCcccC
Confidence            9999999999998763

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.9e-46  Score=322.61  Aligned_cols=240  Identities=26%  Similarity=0.290  Sum_probs=209.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-------HHHHHhhhC--CCceEEEEecCCCHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-------GNQVVSSIG--PEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.  ..++.++++|++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            46789999999999999999999999999999999998764       333333332  257889999999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--CC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--GS  152 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~  152 (262)
                      +++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+  .+
T Consensus       121 ~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCCC
Confidence            99999999999999999987 557888999999999999999999999999999998876 799999999998877  67


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCC-ccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG-VATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      ....|++||+++++|+++++.|++ +||+||+|+||+ ++|++....         ....+.++..+|+|+|++++||++
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~---------~~~~~~~r~~~pedvA~~v~~L~s  268 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML---------GGPGIESQCRKVDIIADAAYSIFQ  268 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH---------CC--CGGGCBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh---------ccccccccCCCHHHHHHHHHHHHh
Confidence            888999999999999999999999 999999999995 888764211         111245678899999999999999


Q ss_pred             CCCCceeceEEeeCCCcccccCcccc
Q 024839          232 DESAYVSGHDLVVDGGFTAVTNVMSM  257 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~~~~~~~  257 (262)
                      + +.++||++| +|||+....++.++
T Consensus       269 ~-~~~itG~~i-vdgg~~~~~g~~~~  292 (346)
T 3kvo_A          269 K-PKSFTGNFV-IDENILKEEGIENF  292 (346)
T ss_dssp             S-CTTCCSCEE-EHHHHHHHTTCCCG
T ss_pred             c-CCCCCceEE-ECCcEehhceeecc
Confidence            9 889999998 99998877777665

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=3.4e-45  Score=304.99  Aligned_cols=236  Identities=30%  Similarity=0.366  Sum_probs=204.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++++++++++++++.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999999988887766653  257889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||......++.+.+.++|.+++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++|
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchHHHH
Confidence            999999999999854567888999999999999999999999999999998877 7999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+++|+++++.|++++||+|++|+||+++|++.......         .+..+..+|+|+|++++||+++.+.+++|+
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~  253 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK---------KSALGAIEPDDIADVVALLATQADQSFISE  253 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCCHHHHHHHHHHHHTCCTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc---------cccccCCCHHHHHHHHHHHhcCccccccCc
Confidence            99999999999999999999999999999999986543221         134667899999999999999999999999


Q ss_pred             EEeeCCCc
Q 024839          241 DLVVDGGF  248 (262)
Q Consensus       241 ~i~~dgG~  248 (262)
                      .+..+.|.
T Consensus       254 ~~i~p~~~  261 (262)
T 3rkr_A          254 VLVRPTLK  261 (262)
T ss_dssp             EEEECCCC
T ss_pred             EEeccccC
Confidence            99887663

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.4e-45  Score=305.38  Aligned_cols=248  Identities=30%  Similarity=0.436  Sum_probs=213.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++.  ..++.++++|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999 7666666555542  24688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.|++++..++||++||..+..+.+....|++
T Consensus        82 ~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           82 EFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            999999999999986 4467778999999999999999999999999999987643589999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|++++.++++++.+++++||++++++||+++|++....... ..........|.+++.+|+|+|+.+++|+++.+.+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            999999999999999999999999999999999986432111 0011111123567889999999999999998888999


Q ss_pred             ceEEeeCCCcccc
Q 024839          239 GHDLVVDGGFTAV  251 (262)
Q Consensus       239 G~~i~~dgG~~~~  251 (262)
                      |+.+.+|||+++.
T Consensus       241 G~~~~v~gg~~~~  253 (261)
T 1gee_A          241 GITLFADGGMTLY  253 (261)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEEcCCcccC
Confidence            9999999998774

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5e-45  Score=301.52  Aligned_cols=241  Identities=32%  Similarity=0.441  Sum_probs=210.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-C--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-G--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+++ .  ..++.++++|++|+++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988887776665 2  2468899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCC---cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           85 DIMYSNAGVAGPVGT---ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~~~---~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |+||||||... ..+   +.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|
T Consensus        82 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHH
Confidence            99999999863 344   77889999999999999999999999999998876 79999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++++.|+++++.|++++||++++++||+++|++.... .............|.+++.+|+|+++.+++++++++.+++|+
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA  239 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCC
Confidence            9999999999999999999999999999999986431 111111111123466788999999999999999988899999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .|.+|||+++
T Consensus       240 ~~~v~gG~~~  249 (250)
T 2cfc_A          240 ALVMDGAYTA  249 (250)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCceec
Confidence            9999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=9.1e-46  Score=308.85  Aligned_cols=247  Identities=27%  Similarity=0.359  Sum_probs=191.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999887776655542  2468899999999999999999999999


Q ss_pred             -CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           82 -GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        82 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++
T Consensus        90 ~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  167 (266)
T 1xq1_A           90 GGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSAT  167 (266)
T ss_dssp             TTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHH
T ss_pred             CCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHHHH
Confidence             8999999999986 456777889999999999999999999999999998776 7899999999998888888999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |++++.|+++++.+++++||++++|+||+++|++.................|.+++.+|+|+++++.+|+++++.+++|+
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  247 (266)
T 1xq1_A          168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ  247 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999999999999999999999999986543211111111112355778999999999999999888899999


Q ss_pred             EEeeCCCccccc
Q 024839          241 DLVVDGGFTAVT  252 (262)
Q Consensus       241 ~i~~dgG~~~~~  252 (262)
                      .|.+|||+++..
T Consensus       248 ~~~v~gG~~~~~  259 (266)
T 1xq1_A          248 TICVDGGLTVNG  259 (266)
T ss_dssp             EEECCCCEEETT
T ss_pred             EEEEcCCccccc
Confidence            999999998753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=4.5e-45  Score=304.32  Aligned_cols=242  Identities=28%  Similarity=0.428  Sum_probs=206.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++. .++.++++|++++++++++++++.+++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            35789999999999999999999999999999999999888877777774 57899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcC------CCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC------CCCcEEEEecCCCccCCC
Q 024839           84 LDIMYSNAGVAGPVGTIL------DLDMAQFDRTIATNLAGSVMAVKYAARVMVAN------KIRGSIICTTSTASTVGG  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~------~~~~~ii~isS~~~~~~~  151 (262)
                      +|+||||||.... .++.      +.+.++|.+.+++|+.+++.+++++.|.|+++      + .++||++||..+..+.
T Consensus        87 id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           87 VDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEGQ  164 (265)
T ss_dssp             CCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC
T ss_pred             CCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCCC
Confidence            9999999998643 3333      37899999999999999999999999999876      4 7899999999998888


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHHHHHHHHc
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLA  230 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  230 (262)
                      +....|+++|++++.|+++++.|++++||++++|+||+++|++............. ...|. +++.+|+|+|+.+++++
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~  243 (265)
T 2o23_A          165 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLA-SQVPFPSRLGDPAEYAHLVQAII  243 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHH-HTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHH-HcCCCcCCCCCHHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999999987643222111111 12354 78899999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccc
Q 024839          231 SDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +  +.+++|+.|.+|||+++.
T Consensus       244 ~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          244 E--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             H--CTTCCSCEEEESTTCCCC
T ss_pred             h--cCccCceEEEECCCEecC
Confidence            5  468999999999999775

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-46  Score=305.80  Aligned_cols=231  Identities=25%  Similarity=0.340  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecC--CCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDV--RDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~--~~~~~i~~~~~~~~   78 (262)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.   ..+..++.+|+  +++++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988877766652   24567777777  99999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      +.++++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+....|+
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  168 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAYG  168 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcchhH
Confidence            99999999999999876667888999999999999999999999999999998776 79999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++|+|+++|+++++.|+++ +||+||+|+||+++|++.......         .+..+..+|+|+++.++||+++++.++
T Consensus       169 ~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~dva~~~~~l~s~~~~~i  239 (247)
T 3i1j_A          169 VSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD---------ENPLNNPAPEDIMPVYLYLMGPDSTGI  239 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT---------SCGGGSCCGGGGTHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc---------cCccCCCCHHHHHHHHHHHhCchhccc
Confidence            9999999999999999987 899999999999999875322111         112346789999999999999999999


Q ss_pred             eceEEee
Q 024839          238 SGHDLVV  244 (262)
Q Consensus       238 ~G~~i~~  244 (262)
                      ||++|.+
T Consensus       240 tG~~i~~  246 (247)
T 3i1j_A          240 NGQALNA  246 (247)
T ss_dssp             CSCEEEC
T ss_pred             cCeeecC
Confidence            9999986

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.4e-47  Score=311.48  Aligned_cols=232  Identities=25%  Similarity=0.366  Sum_probs=200.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++|++|||||++|||+++|++|++ .|+.|++++|+++..        ...+.++++|++++++++++++.+.  ++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~i   71 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDIIK--NVSF   71 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHTT--TCCE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHHH--hCCC
Confidence            3589999999999999999999999 789999998886521        1357899999999999999996554  7799


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++   .++||++||..+..+.+...+|++||+|+
T Consensus        72 d~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asKaa~  147 (244)
T 4e4y_A           72 DGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFIAKPNSFAYTLSKGAI  147 (244)
T ss_dssp             EEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTCCCTTBHHHHHHHHHH
T ss_pred             CEEEECCccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHccCCCCCchhHHHHHHH
Confidence            9999999987 4478889999999999999999999999999998854   37999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----------HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----------EGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++|+++++.|++++||+||+|+||+++|++........          .........|.+++.+|+|+|++++||+++++
T Consensus       148 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  227 (244)
T 4e4y_A          148 AQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKS  227 (244)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999999864332111          11112223477889999999999999999999


Q ss_pred             CceeceEEeeCCCcccc
Q 024839          235 AYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~  251 (262)
                      .++||++|.+|||++++
T Consensus       228 ~~itG~~i~vdGG~~~~  244 (244)
T 4e4y_A          228 KFMTGGLIPIDGGYTAQ  244 (244)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             ccccCCeEeECCCccCC
Confidence            99999999999999863

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-45  Score=300.79  Aligned_cols=225  Identities=21%  Similarity=0.237  Sum_probs=192.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++.++++|++++++++++++++.++++++|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            47999999999999999999999999999999999998888877775 36899999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++++  ++||++||..+..+.+....|++||+|+++
T Consensus        81 lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           81 VLHCAGTG-EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             EEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             EEECCCCC-CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999986 557888999999999999999999999999999997764  699999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC-CCCCceeceEEeeC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS-DESAYVSGHDLVVD  245 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~i~G~~i~~d  245 (262)
                      |+++++.|++++||+||+|+||+++|++......          .+..++.+|+|+|+.++|+++ +...+++|-.+.=.
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~~  227 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRN  227 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEEC
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEecC
Confidence            9999999999999999999999999998654322          133578899999999999998 45668888766533

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-45  Score=309.01  Aligned_cols=240  Identities=24%  Similarity=0.340  Sum_probs=199.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ..+.++++|++|+++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999888777666532   33589999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCCCCCCccchh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      ++++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|.|++++ ..|+||++||..+..+.+....|++
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  188 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTA  188 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHH
Confidence            999999999999875557888999999999999999999999999999998864 2589999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC-cee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA-YVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~-~i~  238 (262)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...........  ....+.++..+|+|+|++++||++.+.. .++
T Consensus       189 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~  266 (281)
T 4dry_A          189 TKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA--NGEVAAEPTIPIEHIAEAVVYMASLPLSANVL  266 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT--TSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh--hhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            9999999999999999999999999999999999876553321111  1123557789999999999999997655 455


Q ss_pred             ceEEeeC
Q 024839          239 GHDLVVD  245 (262)
Q Consensus       239 G~~i~~d  245 (262)
                      +.+|.-.
T Consensus       267 ~~~i~p~  273 (281)
T 4dry_A          267 TMTVMAT  273 (281)
T ss_dssp             EEEEEET
T ss_pred             cEEEEec
Confidence            5555444

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.6e-44  Score=298.32  Aligned_cols=236  Identities=29%  Similarity=0.398  Sum_probs=204.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999999888777766652  24788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++  |+||++||..+..+.+....|++||+
T Consensus        84 ~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            999999999986 457888999999999999999999999999999998764  89999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCC--CCHHHHHHHHHHHcCCCCCceece
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIV--LKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++++|+++++.|++++||+||+|+||+++|++.............. ..| +++  .+|+|+|+.++|++++.+.+++++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~  238 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHE  238 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCccce
Confidence            9999999999999999999999999999999865432211111111 113 455  899999999999999988888877


Q ss_pred             EEeeCC
Q 024839          241 DLVVDG  246 (262)
Q Consensus       241 ~i~~dg  246 (262)
                      . .+++
T Consensus       239 i-~i~~  243 (247)
T 2jah_A          239 I-FIRP  243 (247)
T ss_dssp             E-EEEE
T ss_pred             E-EecC
Confidence            4 5543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=7.3e-46  Score=305.91  Aligned_cols=233  Identities=18%  Similarity=0.154  Sum_probs=200.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEe-e--CCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIA-D--IQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+.++++.+++ . .     +|+.|+++++++++++.++++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~-~-----~~~~~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P-G-----TIALAEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T-T-----EEECCCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C-C-----CcccCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999 6  9988887776666 1 1     23337778889999999999999


Q ss_pred             CEEEeCCcCCCCC---CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           85 DIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        85 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |+||||||+. ..   .++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||
T Consensus        74 D~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           74 DTIVSNDYIP-RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             EEEEECCCCC-TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CEEEECCCcC-CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHHHH
Confidence            9999999986 44   6788999999999999999999999999999998876 79999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCC---CCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS---AGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +++++|+++++.|++++||+||+|+||+++|++.   ....... .........|.+++.+|+|+|+.++||+++.+.++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~  231 (244)
T 1zmo_A          152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPI  231 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGG
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999986   3211111 11111102467889999999999999999999999


Q ss_pred             eceEEeeCCCcc
Q 024839          238 SGHDLVVDGGFT  249 (262)
Q Consensus       238 ~G~~i~~dgG~~  249 (262)
                      ||+.|.+|||++
T Consensus       232 tG~~i~vdgG~~  243 (244)
T 1zmo_A          232 VGQFFAFTGGYL  243 (244)
T ss_dssp             TTCEEEESTTCC
T ss_pred             cCCEEEeCCCCC
Confidence            999999999963

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.6e-44  Score=301.75  Aligned_cols=247  Identities=47%  Similarity=0.737  Sum_probs=214.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .++.++++|++|+++++++++++.++++
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999998877776666643 3789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-CCccchhh
Q 024839           83 SLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~s  160 (262)
                      ++|+||||||.... ..++.+.+.++|.+.+++|+.+++.++++++|.|++++ .++||++||..+..+.+ ....|+++
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~s  170 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTAT  170 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCCCcchHHH
Confidence            99999999997642 25677889999999999999999999999999998776 79999999999988777 77899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH----hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE----GFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |++++.+++.++.|++++||++++++||+++|++.........    ........+.+++.+|+|+|+++++++++++.+
T Consensus       171 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  250 (278)
T 2bgk_A          171 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccccc
Confidence            9999999999999999999999999999999998765432111    111122234577899999999999999988889


Q ss_pred             eeceEEeeCCCcccc
Q 024839          237 VSGHDLVVDGGFTAV  251 (262)
Q Consensus       237 i~G~~i~~dgG~~~~  251 (262)
                      ++|+.+.+|||+.++
T Consensus       251 ~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          251 VSGLNLVIDGGYTRT  265 (278)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCEEEECCccccc
Confidence            999999999998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.7e-45  Score=303.10  Aligned_cols=247  Identities=31%  Similarity=0.474  Sum_probs=208.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---------CceEEEEecCCCHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---------EKASYRHCDVRDEKQVEET   73 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~i~~~   73 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++..         .++.++++|++|+++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            3468899999999999999999999999999999999998887777666532         4678999999999999999


Q ss_pred             HHHHHHHhCCc-CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC
Q 024839           74 VAYAIEKYGSL-DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS  152 (262)
Q Consensus        74 ~~~~~~~~~~~-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~  152 (262)
                      ++.+.+.++++ |+||||||.. ...++.+.+.++|.+.+++|+.+++.+++++.|.|.+++..++||++||..+..+.+
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            99999999998 9999999986 446778899999999999999999999999999998754258999999999888888


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ....|+++|++++.|++.++.+++++||++++++||+++|++........... .....|.+++.+|+|+++.+.+++++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~  239 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDK-ITEMIPMGHLGDPEDVADVVAFLASE  239 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------C-TGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHH-HHHhCCCCCCCCHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999999999999999865432211111 11123557788999999999999998


Q ss_pred             CCCceeceEEeeCCCcccc
Q 024839          233 ESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++.+++|+.+.+|||+++.
T Consensus       240 ~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          240 DSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             GGTTCCSCEEEESTTC---
T ss_pred             cccCCCCCEEEECCCceec
Confidence            8889999999999998764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=6e-45  Score=301.74  Aligned_cols=243  Identities=30%  Similarity=0.386  Sum_probs=210.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCce-EEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKA-SYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..++++ .++ .++++|++|+++++++++++.+ ++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-AAVAARIVADVTDAEAMTAAAAEAEA-VA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence            45789999999999999999999999999999999999888777766664 356 8899999999999999999988 89


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccchhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~s  160 (262)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+..  ..|+++
T Consensus        85 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~s  162 (254)
T 2wsb_A           85 PVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMAS  162 (254)
T ss_dssp             CCCEEEECCCCC-CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBHHHHHH
T ss_pred             CCcEEEECCccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcchHHHHH
Confidence            999999999986 446777889999999999999999999999999998876 7999999999988777766  899999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |++++.++++++.+++++||++++|+||+++|++....... ..........|.+++.+|+|+|+.+++++++.+.+++|
T Consensus       163 K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  242 (254)
T 2wsb_A          163 KGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG  242 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccC
Confidence            99999999999999999999999999999999975422110 10011111236678899999999999999988889999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      +.+.+|||+++
T Consensus       243 ~~~~v~gG~~~  253 (254)
T 2wsb_A          243 AILAVDGGYTV  253 (254)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCCEec
Confidence            99999999753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-45  Score=306.18  Aligned_cols=244  Identities=27%  Similarity=0.399  Sum_probs=210.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            35679999999999999999999999999999999999887777666653  2478899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|
T Consensus       120 ~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK  197 (285)
T 2c07_A          120 KNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSK  197 (285)
T ss_dssp             SCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHHHH
Confidence            9999999999986 456778899999999999999999999999999998766 79999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.|+++++.|++++||++++|+||+++|++.....+..... .....|.+++.+|+|+|+++++++++++.+++|+.
T Consensus       198 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~  276 (285)
T 2c07_A          198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKN-IISNIPAGRMGTPEEVANLACFLSSDKSGYINGRV  276 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHH-HHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHH-HHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCE
Confidence            99999999999999999999999999999999876543221111 11224667889999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.+|||+++
T Consensus       277 i~v~gG~~~  285 (285)
T 2c07_A          277 FVIDGGLSP  285 (285)
T ss_dssp             EEESTTSCC
T ss_pred             EEeCCCccC
Confidence            999999853

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2e-46  Score=322.21  Aligned_cols=242  Identities=19%  Similarity=0.195  Sum_probs=204.4

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCc---------hhHHHHHhhhCC-----CceEEEEecCCCH--H
Q 024839            7 QGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQD---------ELGNQVVSSIGP-----EKASYRHCDVRDE--K   68 (262)
Q Consensus         7 ~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~-----~~~~~~~~D~~~~--~   68 (262)
                      ++|++|||||++  |||+++|++|+++|++|++++++.         ++++...+....     ..+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999766554         333332222211     3467889999888  8


Q ss_pred             ------------------HHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHH
Q 024839           69 ------------------QVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV  129 (262)
Q Consensus        69 ------------------~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~  129 (262)
                                        +++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999742 4578889999999999999999999999999999


Q ss_pred             HHhCCCCcEEEEecCCCccCCCCCCc-cchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCccch-----
Q 024839          130 MVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTINDV-----  202 (262)
Q Consensus       130 ~~~~~~~~~ii~isS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~-----  202 (262)
                      |+++   |+||++||..+..+.+... +|++||+|+.+|+++|+.|+++ +||+||+|+||+++|++........     
T Consensus       161 m~~~---g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HhhC---CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            9653   8999999999999988885 9999999999999999999998 8999999999999999876542100     


Q ss_pred             ---------------------------------------HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          203 ---------------------------------------EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       203 ---------------------------------------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                                                             .........|.+++.+|+|+|++++||+++.+.++||++|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                                   01112223577999999999999999999999999999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      +|||+++.
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999883

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=5.5e-45  Score=306.21  Aligned_cols=244  Identities=27%  Similarity=0.368  Sum_probs=209.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+.  ..++.++++|++++++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999999876655544432  2468899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcC-CCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--CCCCccch
Q 024839           82 GSLDIMYSNAGVAGPVGTIL-DLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--GSGPHAYT  158 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~  158 (262)
                      +++|+||||||......++. +.+.++|.+.+++|+.+++.+++.+++.|++++ .++||++||..+..+  .+....|+
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYN  188 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHHHH
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCcccHH
Confidence            99999999999864325666 788999999999999999999999999998866 799999999998887  67788999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++|++++.|+++++.|++++| ++++|+||+++|++............ ....|.+++.+|+|+|+.+++|+++++.+++
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t  266 (279)
T 3ctm_A          189 TAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKW-WQLTPLGREGLTQELVGGYLYLASNASTFTT  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHH-HHHSTTCSCBCGGGTHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHH-HHhCCccCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999 99999999999998753322211111 1234667899999999999999998888999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.|.+|||+++
T Consensus       267 G~~i~vdgG~~~  278 (279)
T 3ctm_A          267 GSDVVIDGGYTC  278 (279)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCeec
Confidence            999999999875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.4e-44  Score=298.35  Aligned_cols=243  Identities=27%  Similarity=0.435  Sum_probs=212.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.   ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999999887766655542   24688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++
T Consensus        82 ~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~  159 (248)
T 2pnf_A           82 LVDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYST  159 (248)
T ss_dssp             HSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHH
Confidence            999999999999986 446777889999999999999999999999999998776 799999999988888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +|++++.+++.++.|++++||++++++||+++|++........... .....|.+++.+|+|+++++.+++++...+++|
T Consensus       160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (248)
T 2pnf_A          160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQK-YKEQIPLGRFGSPEEVANVVLFLCSELASYITG  238 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH-HHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHH-HHhcCCCCCccCHHHHHHHHHHHhCchhhcCCC
Confidence            9999999999999999999999999999999999865432211111 112235677899999999999999988789999


Q ss_pred             eEEeeCCCc
Q 024839          240 HDLVVDGGF  248 (262)
Q Consensus       240 ~~i~~dgG~  248 (262)
                      +.+.+|||+
T Consensus       239 ~~~~v~gg~  247 (248)
T 2pnf_A          239 EVIHVNGGM  247 (248)
T ss_dssp             CEEEESTTC
T ss_pred             cEEEeCCCc
Confidence            999999996

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-45  Score=302.80  Aligned_cols=244  Identities=25%  Similarity=0.332  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+...+..+++.   ..++.++++|++|+++++++++++.+.+
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999997665544443331   2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-------C
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-------P  154 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-------~  154 (262)
                      +++|+||||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.|.+++..++||++||..+..+.+.       .
T Consensus        91 ~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  169 (265)
T 1h5q_A           91 GPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  169 (265)
T ss_dssp             CSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             CCCCEEEECCCcC-CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccc
Confidence            9999999999986 4567788999999999999999999999999999987653589999999887765432       6


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..|+++|++++.|+++++.|++++||++++|+||+++|++.....+..... .....|.+++.+|+|+++.+++|+++++
T Consensus       170 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (265)
T 1h5q_A          170 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDH-QASNIPLNRFAQPEEMTGQAILLLSDHA  248 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH-HHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHH-HHhcCcccCCCCHHHHHHHHHhhccCch
Confidence            789999999999999999999999999999999999999876542222111 1223466788999999999999999888


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                      .+++|+.+.+|||+++
T Consensus       249 ~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          249 TYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             hcCcCcEEEecCCEeC
Confidence            8999999999999865

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-44  Score=303.25  Aligned_cols=253  Identities=23%  Similarity=0.346  Sum_probs=214.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-------CCCceEEEEecCCCHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-------GPEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++       ...++.++++|+++++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777666554       235789999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCcc
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHA  156 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  156 (262)
                      +.+.++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.+.+++ .++||++||.. ..+.+....
T Consensus        94 ~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~~~  170 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFPLAVH  170 (303)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCCcchh
Confidence            999999999999999975 446778899999999999999999999999999765544 68999999998 777788899


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHH--hhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVC--KVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |+++|+++.+++++++.+++++||++++|+||+++|++....... ......  ....|.+++.+|+|+|+++++|+++.
T Consensus       171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~  250 (303)
T 1yxm_A          171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA  250 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999953222111 011111  11236678899999999999999988


Q ss_pred             CCceeceEEeeCCCcccccCcccccc
Q 024839          234 SAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      +.+++|+.|.+|||+++....+.+++
T Consensus       251 ~~~~~G~~~~v~gG~~~~~~~~~~~~  276 (303)
T 1yxm_A          251 ASFITGQSVDVDGGRSLYTHSYEVPD  276 (303)
T ss_dssp             GTTCCSCEEEESTTGGGCBTTCCCCC
T ss_pred             cccCCCcEEEECCCeeccccCCCCcc
Confidence            88999999999999887655444443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=3e-44  Score=297.62  Aligned_cols=244  Identities=34%  Similarity=0.431  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.+++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999887766665552  2478899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++|
T Consensus        87 ~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  163 (255)
T 1fmc_A           87 GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             SSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHHHH
Confidence            99999999999863 3444 688999999999999999999999999998766 78999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.+++.++.+++++||++++++||++.|++.................|.+++.+|+|+++++.+++++++.+++|+.
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  243 (255)
T 1fmc_A          164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQI  243 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcE
Confidence            99999999999999999999999999999999765432221111112234667899999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +++|||...
T Consensus       244 ~~v~gg~~~  252 (255)
T 1fmc_A          244 LTVSGGGVQ  252 (255)
T ss_dssp             EEESTTSCC
T ss_pred             EEECCceec
Confidence            999999765

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.2e-44  Score=295.75  Aligned_cols=241  Identities=29%  Similarity=0.378  Sum_probs=206.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.++.+++.+++.  ...++++|++++++++++++    .++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~   75 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALG----SVG   75 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCC
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CCCEEEEeCCCHHHHHHHHH----HcC
Confidence            357899999999999999999999999999999999999888777666554  35677999999999988876    457


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|++++..++||++||..+..+.+....|++||+
T Consensus        76 ~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  154 (244)
T 3d3w_A           76 PVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKG  154 (244)
T ss_dssp             CCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHH
Confidence            899999999986 4567788899999999999999999999999999987543589999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++.++++++.|++++||++++++||+++|++..... ............|.+++.+|+|+++++++++++.+.+++|++
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST  234 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCE
Confidence            9999999999999999999999999999999854211 111101111224667899999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +.+|||+++
T Consensus       235 ~~v~gG~~~  243 (244)
T 3d3w_A          235 LPVEGGFWA  243 (244)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCccC
Confidence            999999865

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=8.7e-45  Score=299.56  Aligned_cols=243  Identities=28%  Similarity=0.447  Sum_probs=189.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++.  ..++.++++|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999998 666666655555442  2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.|++++ .++||++||..+..+.+...+|+++|
T Consensus        82 ~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 GRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             SCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHHH
Confidence            9999999999986 445677788999999999999999999999999998766 79999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++++.|+++++.|++++||++++++||++.|++........... .....|.+++.+|+|+++++.+++++++.+++|+.
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  238 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEM-YLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQV  238 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH-HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHH-HHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcE
Confidence            99999999999999999999999999999998765432221111 11223567889999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +++|||+++
T Consensus       239 ~~v~gG~~~  247 (247)
T 2hq1_A          239 INIDGGLVM  247 (247)
T ss_dssp             EEESTTC--
T ss_pred             EEeCCCccC
Confidence            999999753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-44  Score=302.44  Aligned_cols=241  Identities=22%  Similarity=0.270  Sum_probs=200.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|+ |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. .++.++++|++|+++++++++++.+++++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            456 9999999999999999999999999999999998888877777653 47889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCc-EEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRG-SIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|.|++++ .| +||++||..+..+.+....|+++|+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~asKa  176 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYGGTKA  176 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHHHHHH
Confidence            999999999864346888999999999999999999999999999998876 67 9999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +++.|+++++.|++++||+||+|+||+++|++............... .......+|+|+|+.++||+++ ..+++|+.|
T Consensus       177 a~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~v~~l~s~-~~~~~g~~i  254 (272)
T 2nwq_A          177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT-YAGAHPIQPEDIAETIFWIMNQ-PAHLNINSL  254 (272)
T ss_dssp             HHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEEEE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHh-hccCCCCCHHHHHHHHHHHhCC-CccCccceE
Confidence            99999999999999999999999999999998653211111111110 0112357999999999999986 568999999


Q ss_pred             eeCCCcc
Q 024839          243 VVDGGFT  249 (262)
Q Consensus       243 ~~dgG~~  249 (262)
                      .+|+|..
T Consensus       255 ~v~~~~~  261 (272)
T 2nwq_A          255 EIMPVSQ  261 (272)
T ss_dssp             EEEETTE
T ss_pred             EEeeccC
Confidence            9999853

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.2e-44  Score=297.72  Aligned_cols=236  Identities=24%  Similarity=0.295  Sum_probs=198.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++++|++|+++++++++++.++++++|+||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            689999999999999999999999999999999988888777775 4788999999999999999999999999999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||||+.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+....|++||+++++|+
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  158 (248)
T 3asu_A           80 NNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFS  158 (248)
T ss_dssp             ECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHHHHHHHHH
Confidence            9999863346778899999999999999999999999999998766 799999999999998888999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          169 RSAASELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ++++.|++++||+||+|+||+++ |++............... .......+|+|+|+.++||+++ ..+++|+.+.++++
T Consensus       159 ~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~-~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v~~~  236 (248)
T 3asu_A          159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-YQNTVALTPEDVSEAVWWVSTL-PAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHTTTSCCEEEEEEECSBCC-----------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEECCT
T ss_pred             HHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH-HhccCCCCHHHHHHHHHHHhcC-CccceeeEEEEccc
Confidence            99999999999999999999999 998643211111000010 0112357999999999999996 46899999999987


Q ss_pred             c
Q 024839          248 F  248 (262)
Q Consensus       248 ~  248 (262)
                      .
T Consensus       237 ~  237 (248)
T 3asu_A          237 T  237 (248)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.2e-44  Score=296.68  Aligned_cols=240  Identities=28%  Similarity=0.435  Sum_probs=208.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEE-eeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..+++.+++.  ..++.++++|++++++++++++++.++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999998 4788777666555442  2478899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.+.|.|++++ .++||++||..+..+.+....|+++|+++
T Consensus        81 d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            9999999986 446778899999999999999999999999999998766 79999999999888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHc-CCCCCceeceEEe
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA-SDESAYVSGHDLV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~i~G~~i~  243 (262)
                      +.|+++++.+++++||++++++||+++|++........... .....|.+++.+|+|+++++.+++ ++.+.+++|+.+.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK-ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHH-HHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHH-HhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence            99999999999999999999999999999865443222111 112236678899999999999999 6677899999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+++
T Consensus       238 v~gG~~~  244 (244)
T 1edo_A          238 IDGGIAI  244 (244)
T ss_dssp             ESTTTTC
T ss_pred             eCCCccC
Confidence            9999753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5e-45  Score=303.41  Aligned_cols=239  Identities=18%  Similarity=0.193  Sum_probs=204.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH---cCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAE---HGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~---~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++++|++|||||++|||+++|++|++   +|++|++++|+.+.++++.+++.    ..++.++++|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   89999999999888777766652    35788999999999999999999


Q ss_pred             HHH--HhCCcC--EEEeCCcCCCCC-CCcCC-CCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC--CCCcEEEEecCCCcc
Q 024839           77 AIE--KYGSLD--IMYSNAGVAGPV-GTILD-LDMAQFDRTIATNLAGSVMAVKYAARVMVAN--KIRGSIICTTSTAST  148 (262)
Q Consensus        77 ~~~--~~~~~d--~li~~ag~~~~~-~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~--~~~~~ii~isS~~~~  148 (262)
                      +.+  .++++|  +||||||+.... .++.+ .+.++|++++++|+.+++.++++++|.|+++  + .|+||++||..+.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~g~iv~isS~~~~  160 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-SKTVVNISSLCAL  160 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-EEEEEEECCGGGT
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CceEEEEcCchhc
Confidence            988  668899  999999986332 45777 7899999999999999999999999999776  4 6899999999999


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----cchHhHHHhhhcccCCCCCHHHHHH
Q 024839          149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----NDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                      .+.+....|++||+++++|+++++.|+++  |+||+|+||+++|++.....    ............|.+++.+|+|+|+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  238 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ  238 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence            99889999999999999999999999974  99999999999999854321    1111111112236688999999999


Q ss_pred             HHHHHcCCCCCceeceEEeeCC
Q 024839          225 AALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       225 ~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      .++||+++ +.++||++|.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999985 6899999999996

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=6.9e-44  Score=292.29  Aligned_cols=229  Identities=24%  Similarity=0.255  Sum_probs=203.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.   ..++.++++|++|+++++++++++.+++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999999888877766553   357899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|.++  .+++|+++|..+..+.+....|+++|++
T Consensus        81 id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccc-cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCCCcchHHHHHHH
Confidence            99999999986 56788899999999999999999999999999999543  5899999999999998889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +++|+++++  +..+||+||+|+||+++|++........         +..++.+|+|+|+++.||+++++.+++|+.+.
T Consensus       158 ~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~---------~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~  226 (235)
T 3l77_A          158 ARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKP---------KEKGYLKPDEIAEAVRCLLKLPKDVRVEELML  226 (235)
T ss_dssp             HHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCC---------GGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEE
T ss_pred             HHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCcc---------cccCCCCHHHHHHHHHHHHcCCCCCccceEEE
Confidence            999999994  4478999999999999999976654321         11367899999999999999999999999999


Q ss_pred             eCCCcc
Q 024839          244 VDGGFT  249 (262)
Q Consensus       244 ~dgG~~  249 (262)
                      .|+|+.
T Consensus       227 ~~~~~~  232 (235)
T 3l77_A          227 RSVYQR  232 (235)
T ss_dssp             CCTTSC
T ss_pred             eecccC
Confidence            999974

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.6e-44  Score=321.78  Aligned_cols=240  Identities=28%  Similarity=0.364  Sum_probs=205.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++|++|||||++|||+++|++|+++|++|++++|+..  ..++..++.   .+.+++||++|+++++++++++.++++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999998643  333333333   357899999999999999999999998


Q ss_pred             C-cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           83 S-LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        83 ~-~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      + +|+||||||+. ....+.+.+.++|++++++|+.+++++++++.+.|++++ .++||++||..+..+.++...|+++|
T Consensus       287 ~~id~lV~nAGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          287 GKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCceEEEECCccc-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            6 99999999987 457888999999999999999999999999999987766 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++++|+++++.|++++||+||+|+||+++|+|.......... ......+.++..+|+|+++.+.||+++.+.++||++
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~  443 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNT  443 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH-HHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH-HHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcE
Confidence            9999999999999999999999999999999997654332222 222334667889999999999999999999999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.+|||.++
T Consensus       444 i~vdGG~~l  452 (454)
T 3u0b_A          444 IRVCGQAML  452 (454)
T ss_dssp             EEESSSBSC
T ss_pred             EEECCcccc
Confidence            999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1e-44  Score=295.05  Aligned_cols=218  Identities=28%  Similarity=0.323  Sum_probs=191.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                  +|++|+++++++++++    ++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~----g~   59 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETI----GA   59 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHH----CS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHh----CC
Confidence            4578999999999999999999999999999999998865                  8999999999988754    89


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..+.+....|+++|++
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asK~a  136 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVANTYVKAAINAA  136 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCCCchHHHHHHHH
Confidence            9999999998756678889999999999999999999999999998854   5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH---HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF---VCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      ++.|+++++.|+++  |+||+|+||+++|++...........   ......|.+++.+|+|+|++++|+++  +.++||+
T Consensus       137 ~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~  212 (223)
T 3uce_A          137 IEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGT  212 (223)
T ss_dssp             HHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSC
T ss_pred             HHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCc
Confidence            99999999999987  99999999999999987654332221   12233577899999999999999997  4789999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||+++
T Consensus       213 ~i~vdgG~~~  222 (223)
T 3uce_A          213 VIDVDGGALL  222 (223)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEecCCeec
Confidence            9999999976

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=9.2e-44  Score=301.95  Aligned_cols=248  Identities=23%  Similarity=0.289  Sum_probs=211.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.   ..++.++++|++++++++++++.+.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999887776666552   25788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.++++++|.|.++...++||++||..+..+.+....|++
T Consensus       101 ~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  179 (302)
T 1w6u_A          101 VAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  179 (302)
T ss_dssp             HTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence            999999999999976 4567778999999999999999999999999999985433689999999999888888899999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC-CCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP-FSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ||++++.|+++++.+++++||++++++||+++|+ +....... ..........|.+++.+|+|+|+++++++++.+.++
T Consensus       180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~  259 (302)
T 1w6u_A          180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI  259 (302)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCccccc
Confidence            9999999999999999999999999999999998 43332221 111112223466788999999999999999888899


Q ss_pred             eceEEeeCCCcccc
Q 024839          238 SGHDLVVDGGFTAV  251 (262)
Q Consensus       238 ~G~~i~~dgG~~~~  251 (262)
                      +|+.+.+|||..++
T Consensus       260 ~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          260 NGAVIKFDGGEEVL  273 (302)
T ss_dssp             CSCEEEESTTHHHH
T ss_pred             CCCEEEECCCeeec
Confidence            99999999997654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=5.7e-45  Score=311.36  Aligned_cols=248  Identities=22%  Similarity=0.205  Sum_probs=199.8

Q ss_pred             CCCCCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCch-----------hHHHHHhhhCCC----ceEEEEec
Q 024839            1 MSKPRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQDE-----------LGNQVVSSIGPE----KASYRHCD   63 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~~-----------~~~~~~~~~~~~----~~~~~~~D   63 (262)
                      |+.+++++|++|||||  ++|||+++|++|+++|++|++++|+..           .+++. +++...    ...++.+|
T Consensus         2 M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d   80 (315)
T 2o2s_A            2 AFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLD   80 (315)
T ss_dssp             --CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECC
T ss_pred             CCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhcccccccccccccc
Confidence            6667789999999999  899999999999999999999987531           12222 222211    12444444


Q ss_pred             ------------CC--------CHHHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHH
Q 024839           64 ------------VR--------DEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMA  122 (262)
Q Consensus        64 ------------~~--------~~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l  122 (262)
                                  ++        |+++++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.+++.+
T Consensus        81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  160 (315)
T 2o2s_A           81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL  160 (315)
T ss_dssp             TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence                        33        366899999999999999999999999753 246788899999999999999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEecCCCccCCCCCC-ccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCcc
Q 024839          123 VKYAARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTIN  200 (262)
Q Consensus       123 ~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~~  200 (262)
                      +++++|+|++   .|+||++||..+..+.+.. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++......
T Consensus       161 ~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~  237 (315)
T 2o2s_A          161 LQHFGPIMNE---GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK  237 (315)
T ss_dssp             HHHHSTTEEE---EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC
T ss_pred             HHHHHHHHhc---CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc
Confidence            9999999854   4899999999998888777 58999999999999999999985 89999999999999997543211


Q ss_pred             ----ch-HhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccccc
Q 024839          201 ----DV-EGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       201 ----~~-~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~  252 (262)
                          .. ....  .....|.+++.+|+|+|+.++||+++.+.++||++|.+|||+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          238 SGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             SSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             cccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence                11 1111  1123477889999999999999999989999999999999988754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.2e-45  Score=333.79  Aligned_cols=239  Identities=26%  Similarity=0.378  Sum_probs=202.6

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc---------hhHHHHHhhhCCCceEEEEecCCCHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---------ELGNQVVSSIGPEKASYRHCDVRDEKQVE   71 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~   71 (262)
                      |+.+++++|++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...... ..+|++|.++++
T Consensus         1 m~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~   79 (604)
T 2et6_A            1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGD   79 (604)
T ss_dssp             -CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHH
Confidence            666788999999999999999999999999999999998764         4555555555321112 236888888899


Q ss_pred             HHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC
Q 024839           72 ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG  151 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~  151 (262)
                      ++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.|++.++++++|+|++++ .|+||++||..+..+.
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~  157 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGN  157 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC
Confidence            99999999999999999999986 456888999999999999999999999999999998876 7999999999999988


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      +....|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|.......  .    .    ....+|+|++..++||++
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~--~----~----~~~~~pe~vA~~v~~L~s  226 (604)
T 2et6_A          158 FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP--P----M----LEKLGPEKVAPLVLYLSS  226 (604)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH--H----H----HTTCSHHHHHHHHHHHTS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh--h----h----hccCCHHHHHHHHHHHhC
Confidence            8899999999999999999999999999999999998 688775432111  0    0    123599999999999999


Q ss_pred             CCCCceeceEEeeCCCcccccCc
Q 024839          232 DESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +. .++||+.|.+|||+.....+
T Consensus       227 ~~-~~itG~~~~vdgG~~~~~~~  248 (604)
T 2et6_A          227 AE-NELTGQFFEVAAGFYAQIRW  248 (604)
T ss_dssp             SS-CCCCSCEEEEETTEEEEEEE
T ss_pred             Cc-ccCCCCEEEECCCeEEEEEE
Confidence            98 89999999999998765443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-44  Score=299.71  Aligned_cols=240  Identities=22%  Similarity=0.241  Sum_probs=197.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH-h
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK-Y   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   81 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.++ +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999999999999999887776666552  247889999999999999999999887 8


Q ss_pred             CCcCEEEeCCc--CC----CCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           82 GSLDIMYSNAG--VA----GPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        82 ~~~d~li~~ag--~~----~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      +++|+||||||  +.    ....++.+.+.++|.+++++|+.+++.+++.++|.|++++ .|+||++||..+..+. ...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC-SSH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC-CCC
Confidence            99999999995  32    1235677889999999999999999999999999998776 7999999999887654 467


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh----HHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG----FVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      +|++||+++++|+++++.|++++||+||+|+||+++|++..........    .......+.++..+|+|+|+.++||++
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999986543211110    011112244556799999999999999


Q ss_pred             CCC-CceeceEEeeCC
Q 024839          232 DES-AYVSGHDLVVDG  246 (262)
Q Consensus       232 ~~~-~~i~G~~i~~dg  246 (262)
                      +++ .++||++|.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            886 489999998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=4.9e-44  Score=296.72  Aligned_cols=245  Identities=29%  Similarity=0.403  Sum_probs=210.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+ .+..+++.+++.  ..++.++++|++++++++++++++.++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998 777766655542  247889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----CCcEEEEecCCCccC-CCCCCc
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----IRGSIICTTSTASTV-GGSGPH  155 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----~~~~ii~isS~~~~~-~~~~~~  155 (262)
                      ++++|+||||||......++.+.+.++|.+++++|+.+++.++++++|.|.+++    ..++||++||..+.. +.+...
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence            999999999999733556788899999999999999999999999999997532    138999999998877 777889


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .|+++|++++.+++.++.+++++||++++++||+++|++........... .....|.+++.+|+|+++++++++++...
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~  241 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDR-ISNGIPMGRFGTAEEMAPAFLFFASHLAS  241 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHH-HHTTCTTCSCBCGGGTHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHH-HhccCCCCcCCCHHHHHHHHHHHhCcchh
Confidence            99999999999999999999999999999999999999876542221111 11234667889999999999999987766


Q ss_pred             -ceeceEEeeCCCcc
Q 024839          236 -YVSGHDLVVDGGFT  249 (262)
Q Consensus       236 -~i~G~~i~~dgG~~  249 (262)
                       +++|+.+.+|||++
T Consensus       242 ~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          242 GYITGQVLDINGGQY  256 (258)
T ss_dssp             TTCCSEEEEESTTSS
T ss_pred             ccccCCEEeECCCcc
Confidence             89999999999974

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-44  Score=294.93  Aligned_cols=231  Identities=24%  Similarity=0.348  Sum_probs=196.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+..+    ++.  ++.++ +|+  .++++++++++    .++
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~--~~~~~-~D~--~~~~~~~~~~~----~~i   82 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSG--HRYVV-CDL--RKDLDLLFEKV----KEV   82 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTC--SEEEE-CCT--TTCHHHHHHHS----CCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hhC--CeEEE-eeH--HHHHHHHHHHh----cCC
Confidence            578999999999999999999999999999999999874432    232  46677 999  55677766655    389


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|+++
T Consensus        83 D~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  160 (249)
T 1o5i_A           83 DILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMAL  160 (249)
T ss_dssp             SEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHHHHHHHH
Confidence            9999999976 456788899999999999999999999999999998876 79999999999999888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.|+++++.|++++||++|+|+||+++|++.................|.+++.+|+|+|+.++||+++.+.+++|+++.+
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~v  240 (249)
T 1o5i_A          161 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV  240 (249)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEE
Confidence            99999999999999999999999999999864322111110111234668899999999999999998889999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+++
T Consensus       241 dgG~~~  246 (249)
T 1o5i_A          241 DGGLSK  246 (249)
T ss_dssp             STTCCC
T ss_pred             CCCccc
Confidence            999865

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-43  Score=290.63  Aligned_cols=241  Identities=27%  Similarity=0.339  Sum_probs=205.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.  .+.++.+|++++++++++++    .++
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~   75 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALG----GIG   75 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCC
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCCcEEecCCCHHHHHHHHH----HcC
Confidence            456889999999999999999999999999999999999887776665543  45677999999999988877    457


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++..++||++||..+..+.+....|+++|+
T Consensus        76 ~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  154 (244)
T 1cyd_A           76 PVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG  154 (244)
T ss_dssp             CCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHH
Confidence            899999999986 4467788999999999999999999999999999987543589999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +++.+++.++.+++++||++++++||+++|++..... ............|.+++.+|+|+++++++++++++.+++|+.
T Consensus       155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (244)
T 1cyd_A          155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG  234 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCE
Confidence            9999999999999999999999999999998754211 111101111223667899999999999999998888999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      +.+|||+++
T Consensus       235 ~~v~gG~~~  243 (244)
T 1cyd_A          235 ILVDAGYLA  243 (244)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCccC
Confidence            999999865

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=7.9e-45  Score=311.02  Aligned_cols=249  Identities=22%  Similarity=0.226  Sum_probs=172.9

Q ss_pred             CCCCCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEeeCCc-----------hhHH-----------HHHhhhCCC-
Q 024839            1 MSKPRLQGKVAIIMGA--ASGIGEATAKLFAEHGAFVIIADIQD-----------ELGN-----------QVVSSIGPE-   55 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~--s~giG~~ia~~l~~~g~~V~~~~r~~-----------~~~~-----------~~~~~~~~~-   55 (262)
                      |+.+++++|++|||||  ++|||+++|++|+++|++|++++|+.           +.++           ++.+++... 
T Consensus         2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred             CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence            6777889999999999  89999999999999999999998752           1111           112222110 


Q ss_pred             ----ceEEEEec------------CCC--------HHHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHH
Q 024839           56 ----KASYRHCD------------VRD--------EKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDR  110 (262)
Q Consensus        56 ----~~~~~~~D------------~~~--------~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~  110 (262)
                          ...++.+|            +++        +++++++++++.++++++|+||||||+.. ...++.+.+.++|++
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~  161 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA  161 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence                12444444            233        45899999999999999999999999753 246788899999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC-ccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCC
Q 024839          111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPF  188 (262)
Q Consensus       111 ~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG  188 (262)
                      ++++|+.+++.++++++|+|++   .|+||++||..+..+.+.. ..|++||+|+++|+++|+.|+++ +||+||+|+||
T Consensus       162 ~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          162 AVSSSSYSFVSLLQHFLPLMKE---GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHhHhhHHHHHHHHHHHHHHhc---CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            9999999999999999999854   4899999999998888777 69999999999999999999985 89999999999


Q ss_pred             CccCCCCCCCccch-----HhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccccc
Q 024839          189 GVATPFSAGTINDV-----EGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       189 ~v~t~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~  252 (262)
                      +++|++........     ....  .....|.+++.+|+|+|+.++||+++.+.++||++|.+|||+++..
T Consensus       239 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          239 PLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             CCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             CccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            99999865432110     0000  0112366889999999999999999989999999999999998753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=8.7e-44  Score=301.59  Aligned_cols=245  Identities=24%  Similarity=0.206  Sum_probs=198.5

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCc-----------hhHHHHHhhhCCC----ceEEEEec--
Q 024839            3 KPRLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQD-----------ELGNQVVSSIGPE----KASYRHCD--   63 (262)
Q Consensus         3 ~~~~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~----~~~~~~~D--   63 (262)
                      .+++++|++|||||+  +|||+++|++|+++|++|++++|+.           ++++++ +++...    ....+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            456889999999999  9999999999999999999998653           112221 222211    12344443  


Q ss_pred             ------CC------------CHHHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHH
Q 024839           64 ------VR------------DEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVK  124 (262)
Q Consensus        64 ------~~------------~~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~  124 (262)
                            +.            ++++++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.+++.+++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  32            266899999999999999999999999742 24677889999999999999999999999


Q ss_pred             HHHHHHHhCCCCcEEEEecCCCccCCCCCC-ccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCCcc-c
Q 024839          125 YAARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTIN-D  201 (262)
Q Consensus       125 ~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~~~-~  201 (262)
                      +++|+|++   .|+||++||..+..+.+.. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++...... .
T Consensus       162 ~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~  238 (297)
T 1d7o_A          162 HFLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHHHhcc---CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccH
Confidence            99999854   4899999999998888777 69999999999999999999985 89999999999999999765321 1


Q ss_pred             hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          202 VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ..........|.+++.+|+|+|+.++||+++.+.++||+.|.+|||+++.
T Consensus       239 ~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            11111112246788999999999999999998899999999999998875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-42  Score=285.48  Aligned_cols=231  Identities=24%  Similarity=0.308  Sum_probs=209.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +|++|||||++|||++++++|+++|+       +|++++|+.+..+++.+++.  ..++.++++|++++++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       99999999888777666653  2578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|+
T Consensus        82 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchhH
Confidence            9999999999999986 456788899999999999999999999999999998766 79999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +||++++.|+++++.+++++||++++++||+++|++........          ..++.+|+|+|+.+++++++++.+++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~dva~~~~~l~~~~~~~~~  229 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVV  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT----------GGGSBCHHHHHHHHHHHHTSCTTEEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc----------cccCCCHHHHHHHHHHHHhCCccccc
Confidence            99999999999999999999999999999999999876532211          12578999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+++..|||..+
T Consensus       230 g~~~~~~~~~~~  241 (244)
T 2bd0_A          230 EEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEETTCCC
T ss_pred             hheEEecccccc
Confidence            999999999876

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.9e-43  Score=289.26  Aligned_cols=239  Identities=28%  Similarity=0.412  Sum_probs=207.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhhC--CCceEE-EEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSIG--PEKASY-RHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~-~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++.  ..++.. +.+|++++++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 888877766655542  235666 999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|++
T Consensus        81 ~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            99999999986 446778899999999999999999999999999998776 7999999999888888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      ++.++++++.+++++||++++++||+++|++........... .....|.+++.+|+|+++++.++++++..+++|+.+.
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEA-YLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH-HHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            999999999999999999999999999999865432221111 1122356788999999999999999887899999999


Q ss_pred             eCCCcc
Q 024839          244 VDGGFT  249 (262)
Q Consensus       244 ~dgG~~  249 (262)
                      +|||+.
T Consensus       238 v~gg~~  243 (245)
T 2ph3_A          238 VDGGLT  243 (245)
T ss_dssp             ESTTCS
T ss_pred             ECCCCC
Confidence            999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.4e-43  Score=321.74  Aligned_cols=231  Identities=31%  Similarity=0.489  Sum_probs=195.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++||++|||||++|||+++|++|+++|++|++.++..  .+++.+++.  ..++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            367899999999999999999999999999999998642  222333331  245677778884  55678899999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|+||||||+. ...++.+++.++|++++++|+.|++.++++++|+|++++ .|+||++||..+..+.+...+|++||
T Consensus       394 G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asK  471 (604)
T 2et6_A          394 GTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSK  471 (604)
T ss_dssp             SCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHHH
Confidence            9999999999986 456888999999999999999999999999999998877 79999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+.+|+++|+.|++++||+||+|+||. .|+|.......          ......+|+|+++.++||+++.+. +||+.
T Consensus       472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~----------~~~~~~~pe~vA~~v~~L~s~~~~-itG~~  539 (604)
T 2et6_A          472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE----------QDKNLYHADQVAPLLVYLGTDDVP-VTGET  539 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCE
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch----------hhccCCCHHHHHHHHHHHhCCccC-CCCcE
Confidence            9999999999999999999999999995 89886532111          012356999999999999999988 99999


Q ss_pred             EeeCCCccccc
Q 024839          242 LVVDGGFTAVT  252 (262)
Q Consensus       242 i~~dgG~~~~~  252 (262)
                      |.+|||+....
T Consensus       540 ~~vdGG~~~~~  550 (604)
T 2et6_A          540 FEIGGGWIGNT  550 (604)
T ss_dssp             EEEETTEEEEE
T ss_pred             EEECCCeeEee
Confidence            99999987643

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-42  Score=290.76  Aligned_cols=242  Identities=25%  Similarity=0.340  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-CchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++.  ..++.++++|++|+++++++++++.++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 6666665555442  256889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTI  159 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~  159 (262)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|+ +  .++||++||..+. .+.+....|++
T Consensus        97 ~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~~sS~~~~~~~~~~~~~Y~~  172 (274)
T 1ja9_A           97 FGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIILTSSIAAVMTGIPNHALYAG  172 (274)
T ss_dssp             HSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             cCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEEEcChHhccCCCCCCchHHH
Confidence            99999999999986 456777899999999999999999999999999986 2  3899999999988 67778889999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC------------CccchHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG------------TINDVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +|++++.+++.++.+++.+||++++++||+++|++...            ..............|.+++.+|+|++++++
T Consensus       173 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  252 (274)
T 1ja9_A          173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS  252 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            99999999999999999999999999999999987541            110111111122346678999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCcc
Q 024839          228 FLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++++++..+++|+.+++|||+.
T Consensus       253 ~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          253 ALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHhCcccccccCcEEEecCCcC
Confidence            9999888899999999999963

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.1e-42  Score=284.40  Aligned_cols=224  Identities=21%  Similarity=0.254  Sum_probs=188.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++.+|++++++++++++++.+   .+|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-NNVGYRARDLASHQEVEQLFEQLDS---IPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS-SCCCEEECCTTCHHHHHHHHHSCSS---CCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-hccCeEeecCCCHHHHHHHHHHHhh---cCCEEE
Confidence            689999999999999999999999999999999999888888774 5788999999999999999887643   349999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++  ++||++||..+..+.+....|++||+|++.|+
T Consensus        78 ~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  154 (230)
T 3guy_A           78 HSAGSG-YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLI  154 (230)
T ss_dssp             ECCCCC-CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EeCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCCCCCCchhHHHHHHHHHHH
Confidence            999986 567888999999999999999999999999999997764  59999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcC-CCCCceeceEEeeCCC
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLAS-DESAYVSGHDLVVDGG  247 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~i~G~~i~~dgG  247 (262)
                      ++++.|++++||+||+|+||++.|++.......         .+.+++.+|+|+|+.++++++ +...++||+.+..+..
T Consensus       155 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGKS---------LDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             HHHHHHTTTSSCEEEEEEECCC-------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC---
T ss_pred             HHHHHHHHhcCeEEEEEECCcccChHHHhcCCC---------CCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCCC
Confidence            999999999999999999999999987543221         145778999999999999997 6677999999998865


Q ss_pred             c
Q 024839          248 F  248 (262)
Q Consensus       248 ~  248 (262)
                      .
T Consensus       226 ~  226 (230)
T 3guy_A          226 H  226 (230)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.2e-41  Score=278.74  Aligned_cols=227  Identities=29%  Similarity=0.346  Sum_probs=192.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.  ++.++.+|++++++++++++++.+.++++|+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999999888777766664  5788999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|++++.
T Consensus        82 li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (234)
T 2ehd_A           82 LVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLG  159 (234)
T ss_dssp             EEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHHHHHHH
Confidence            99999986 456778899999999999999999999999999998876 7999999999999888888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ++++++.+++++||++++|+||+++|++......   .    .     ...+|+|+|+.+++++++++.+++|+.+..++
T Consensus       160 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~----~-----~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          160 LAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG---Q----A-----WKLKPEDVAQAVLFALEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEECC----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECCC-
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc---c----c-----CCCCHHHHHHHHHHHhCCCcccccceEEEeec
Confidence            9999999999999999999999999998653211   0    0     14699999999999999998999999877766


Q ss_pred             Ccc
Q 024839          247 GFT  249 (262)
Q Consensus       247 G~~  249 (262)
                      ...
T Consensus       228 ~~~  230 (234)
T 2ehd_A          228 RPT  230 (234)
T ss_dssp             ---
T ss_pred             CCC
Confidence            543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.7e-42  Score=294.26  Aligned_cols=231  Identities=26%  Similarity=0.349  Sum_probs=196.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  ..++.++++|++|+++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999999998888777663  257899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++..|+||++||..+..+.+....|++|
T Consensus       106 ~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  184 (301)
T 3tjr_A          106 LGGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA  184 (301)
T ss_dssp             HSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence            99999999999987 55788899999999999999999999999999999876546899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh---------HHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG---------FVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+|+++|+++++.|++++||+|++|+||+++|++..........         ............++|+|+|+.++..+.
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999985432100000         000001122346799999999999997


Q ss_pred             CCC
Q 024839          232 DES  234 (262)
Q Consensus       232 ~~~  234 (262)
                      .+.
T Consensus       265 ~~~  267 (301)
T 3tjr_A          265 ANR  267 (301)
T ss_dssp             HTC
T ss_pred             cCC
Confidence            654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.4e-41  Score=285.78  Aligned_cols=236  Identities=22%  Similarity=0.247  Sum_probs=200.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++. .++.++++|++++++++++++++.++++++|
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP-DRAEAISLDVTDGERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence            568999999999999999999999999999999999998888777665 5789999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||+. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+...+|++||++++
T Consensus        82 ~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (281)
T 3m1a_A           82 VLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALE  159 (281)
T ss_dssp             EEEECCCCE-EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHHHHHH
Confidence            999999986 456788899999999999999999999999999998877 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-------chHhH-----HHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-------DVEGF-----VCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~-----~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      .|+++++.|++++||++++|+||+++|++......       .....     ......+.+++.+|+|+|++++++++++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          160 QLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999998654311       10000     1111235577899999999999999876


Q ss_pred             CCceeceEEeeCCC
Q 024839          234 SAYVSGHDLVVDGG  247 (262)
Q Consensus       234 ~~~i~G~~i~~dgG  247 (262)
                      .   .|..+++.++
T Consensus       240 ~---~~~~~~l~s~  250 (281)
T 3m1a_A          240 K---TPLRLALGGD  250 (281)
T ss_dssp             S---CCSEEEESHH
T ss_pred             C---CCeEEecCch
Confidence            4   2445555443

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.1e-42  Score=297.49  Aligned_cols=236  Identities=26%  Similarity=0.380  Sum_probs=200.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee---------CCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD---------IQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      +++++|++|||||++|||+++|++|+++|++|++++         |+.+..+++.+++..... ...+|+++.+++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHH
Confidence            468899999999999999999999999999999964         456666666555532111 2358999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      +++.++++++|+||||||+. ...++.+.+.++|+..+++|+.+++.++++++|+|++++ .++||++||..+..+.+..
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~~~  161 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQ  161 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCC
Confidence            99999999999999999986 445778899999999999999999999999999998876 7999999999888888888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..|++||++++.|+++++.+++++||+||+|+||++ |++.......  . .       ....+|+|+++.++||+++. 
T Consensus       162 ~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~--~-~-------~~~~~p~dvA~~~~~l~s~~-  229 (319)
T 1gz6_A          162 ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPE--D-L-------VEALKPEYVAPLVLWLCHES-  229 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCH--H-H-------HHHSCGGGTHHHHHHHTSTT-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCCh--h-h-------hccCCHHHHHHHHHHHhCch-
Confidence            999999999999999999999999999999999998 7765432111  0 0       12358999999999999874 


Q ss_pred             CceeceEEeeCCCcccccCc
Q 024839          235 AYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~~  254 (262)
                      .+++|++|.+|||+...+.+
T Consensus       230 ~~~tG~~~~v~GG~~~~~~~  249 (319)
T 1gz6_A          230 CEENGGLFEVGAGWIGKLRW  249 (319)
T ss_dssp             CCCCSCEEEEETTEEEEEEE
T ss_pred             hhcCCCEEEECCCeEEEEee
Confidence            58999999999998765544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5.6e-43  Score=295.85  Aligned_cols=232  Identities=22%  Similarity=0.253  Sum_probs=189.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++. .++.++++|++|+++++++++++    +
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~----~   85 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-GQVEVRELDLQDLSSVRRFADGV----S   85 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS-SEEEEEECCTTCHHHHHHHHHTC----C
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCeeEEEcCCCCHHHHHHHHHhc----C
Confidence            346889999999999999999999999999999999999998888877774 57899999999999999998876    7


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC------------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG------------  150 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~------------  150 (262)
                      ++|+||||||+..   +..+.+.++|++++++|+.+++.++++++|.|.     .+||++||..+..+            
T Consensus        86 ~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----~riv~isS~~~~~~~~~~~~~~~~~~  157 (291)
T 3rd5_A           86 GADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHWPGRINLEDLNWRSR  157 (291)
T ss_dssp             CEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE-----EEEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred             CCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hheeEeechhhccCCCCccccccccc
Confidence            8999999999863   235678889999999999999999999999873     48999999987754            


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHHCCCC--cEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCC-HHHHHHHH
Q 024839          151 -GSGPHAYTISKHGLLGLVRSAASELGKHG--IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK-AKHVAEAA  226 (262)
Q Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~va~~~  226 (262)
                       .+....|++||+|++.|++.++.+++++|  |++|+|+||+++|++..............  .+.++... |+|+|+.+
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~A~~~  235 (291)
T 3rd5_A          158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS--AATRVVATDADFGARQT  235 (291)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHH--HHHHHHhCCHHHHHHHH
Confidence             23456899999999999999999999888  99999999999999987653332222111  24455544 99999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCcccc
Q 024839          227 LFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +|++++  .+++|+.|.+|||+.-.
T Consensus       236 ~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          236 LYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HHHHcC--CCCCCceeCCcccccCc
Confidence            999998  38999999999998653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-42  Score=286.59  Aligned_cols=238  Identities=27%  Similarity=0.390  Sum_probs=198.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..    .++.++++|++|+++++++++.+.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            6799999999999999999999999999999999998877666655532    368899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccchh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +++|+||||||..         +.++|.+.+++|+.+++.+++.++|.|++++  ..++||++||..+..+.+....|++
T Consensus        85 g~id~lv~~Ag~~---------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCC---------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCC---------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence            9999999999974         1356899999999999999999999997642  1589999999999988888899999


Q ss_pred             hhHHHHHHHHHH--HHHHCCCCcEEEEEeCCCccCCCCCCCccchH--h---HHHhh--hcccCCCCCHHHHHHHHHHHc
Q 024839          160 SKHGLLGLVRSA--ASELGKHGIRVNCVSPFGVATPFSAGTINDVE--G---FVCKV--ANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       160 sK~a~~~~~~~l--a~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~---~~~~~--~~~~~~~~~~~~va~~~~~l~  230 (262)
                      ||++++.|++++  +.|++++||+||+|+||+++|++.........  .   .....  ..+..++.+|+|+|+.+++|+
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            999999999995  68999999999999999999997543211100  0   00111  112234679999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccccCc
Q 024839          231 SDESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +++  +++|++|.+|||..++-..
T Consensus       236 s~~--~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          236 EDD--ALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HCT--TCSSCEEEEETTTEEEECC
T ss_pred             cCc--CCCCcEEEecCCCcccccC
Confidence            875  4899999999998664433

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.2e-41  Score=291.11  Aligned_cols=233  Identities=21%  Similarity=0.293  Sum_probs=192.0

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      |+|.++.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..    .++.++++|++++++++++++.
T Consensus         1 M~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (319)
T 3ioy_A            1 MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE   80 (319)
T ss_dssp             --CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            778889999999999999999999999999999999999999888777666532    2789999999999999999999


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-----CCCcEEEEecCCCccCCC
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-----KIRGSIICTTSTASTVGG  151 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~~~~ii~isS~~~~~~~  151 (262)
                      +.+.++++|+||||||+. ...++.+.+.++|++++++|+.|++.++++++|.|.++     +..|+||++||..+..+.
T Consensus        81 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~  159 (319)
T 3ioy_A           81 VEARFGPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA  159 (319)
T ss_dssp             HHHHTCCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC
T ss_pred             HHHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC
Confidence            999999999999999986 56788899999999999999999999999999999864     127899999999999999


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH-----------HHhhhcccCCCCCHH
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF-----------VCKVANLKGIVLKAK  220 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~  220 (262)
                      +....|++||+|+++|+++++.|++++||+|++|+||+|.|++...........           ...........++|+
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  239 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD  239 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence            999999999999999999999999999999999999999999876432111110           000000111227999


Q ss_pred             HHHHHHHHHcCCCC
Q 024839          221 HVAEAALFLASDES  234 (262)
Q Consensus       221 ~va~~~~~l~~~~~  234 (262)
                      ++|+.++..+..+.
T Consensus       240 ~vA~~~~~al~~~~  253 (319)
T 3ioy_A          240 VIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999987654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=4.6e-42  Score=284.70  Aligned_cols=244  Identities=19%  Similarity=0.180  Sum_probs=198.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCch--hHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||+++|++|+++|++ |++++|+.+  ..+++.+.....++.++++|++|+ ++++++++++.++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            478999999999999999999999999997 999999863  344444433335788999999998 9999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccch
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++|+||||||+.         +.++|++.+++|+.+++.++++++|.|.+++  ..|+||++||..+..+.+....|+
T Consensus        82 ~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  152 (254)
T 1sby_A           82 LKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             cCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHH
Confidence            99999999999974         3467899999999999999999999997642  148999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +||++++.|+++++.+++++||+|++|+||+++|++........  ........ ......+|+|+|+.++++++   .+
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dvA~~i~~~~~---~~  228 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LSHPTQTSEQCGQNFVKAIE---AN  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TTSCCEEHHHHHHHHHHHHH---HC
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-hcCCCCCHHHHHHHHHHHHH---cC
Confidence            99999999999999999888999999999999999865421100  00011111 11224589999999999996   46


Q ss_pred             eeceEEeeCCCcccccCccccccCC
Q 024839          237 VSGHDLVVDGGFTAVTNVMSMLEGH  261 (262)
Q Consensus       237 i~G~~i~~dgG~~~~~~~~~~~~~~  261 (262)
                      ++|+.+.+|||+...-.|......|
T Consensus       229 ~~G~~~~v~gG~~~~~~~~~~~~~~  253 (254)
T 1sby_A          229 KNGAIWKLDLGTLEAIEWTKHWDSH  253 (254)
T ss_dssp             CTTCEEEEETTEEEECCCCCSCCCC
T ss_pred             CCCCEEEEeCCceeEeccccccccC
Confidence            8999999999986666666555544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.2e-42  Score=299.69  Aligned_cols=249  Identities=14%  Similarity=0.020  Sum_probs=207.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHH------------HHHhhh--CCCceEEEEecCCCHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGN------------QVVSSI--GPEKASYRHCDVRDEKQV   70 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~------------~~~~~~--~~~~~~~~~~D~~~~~~i   70 (262)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+.+  ...++..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3589999999999999999999999 9999999988754321            112121  225688999999999999


Q ss_pred             HHHHHHHHHHhCCcCEEEeCCcCC------------CCCCCc---------------------CCCCHHHHHHHHHHHhh
Q 024839           71 EETVAYAIEKYGSLDIMYSNAGVA------------GPVGTI---------------------LDLDMAQFDRTIATNLA  117 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~nv~  117 (262)
                      +++++++.+++|++|+||||||..            +..+++                     .+.+.++|.+++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            999999999999999999999974            122444                     67899999999999999


Q ss_pred             HHH-HHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccchhhhHHHHHHHHHHHHHHCCC-CcEEEEEeCCCccCC
Q 024839          118 GSV-MAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELGKH-GIRVNCVSPFGVATP  193 (262)
Q Consensus       118 ~~~-~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~i~pG~v~t~  193 (262)
                      +.+ .+++++.+.+..++ .|+||++||..+..+.+.+  ..|++||+++++|+|+|+.||+++ |||||+|+||++.|+
T Consensus       205 ~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 78887776433333 5899999999999888877  999999999999999999999999 999999999999999


Q ss_pred             CCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          194 FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      +...... ...+......++++..+||||++.+.||+++   ++.|+.+.+|++..++.--|+|.+
T Consensus       284 ~s~~ip~-~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~~e~~~  345 (405)
T 3zu3_A          284 ASSAIPM-MPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADYKELDP  345 (405)
T ss_dssp             HHHTSTT-HHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCHHHHCH
T ss_pred             hhhcCCC-CcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCchhhcCH
Confidence            8765432 2233333344678899999999999999987   678999999999999998888865

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.2e-43  Score=288.27  Aligned_cols=224  Identities=14%  Similarity=0.116  Sum_probs=195.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~   83 (262)
                      .++|++|||||++|||++++++|+++|++|++++|+.+...        ....++++|++++++++++++++.+++  ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999876532        235678999999999999999999999  79


Q ss_pred             cCEEEeCCcCCCCCCCc-CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTI-LDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|+||||||+.. ..++ .+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..+.+....|++||+
T Consensus        77 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A           77 VDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             EEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCCCchHHHHHHH
Confidence            999999999863 4566 67889999999999999999999999999853   489999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          163 GLLGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       163 a~~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +++.|+++++.|++  ++||+||+|+||+++|++.......         ....+..+|+|+|+.+++++++...+++|+
T Consensus       153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~  223 (241)
T 1dhr_A          153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKRPNSGS  223 (241)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc---------hhhccCCCHHHHHHHHHHHhcCCCcCccce
Confidence            99999999999999  8999999999999999875321110         011234689999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .+.+|||..-
T Consensus       224 ~~~v~g~~~~  233 (241)
T 1dhr_A          224 LIQVVTTDGK  233 (241)
T ss_dssp             EEEEEEETTE
T ss_pred             EEEEeCCCCc
Confidence            9999998753

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=7e-43  Score=303.73  Aligned_cols=250  Identities=14%  Similarity=0.047  Sum_probs=206.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHHH------------HHhhh--CCCceEEEEecCCCHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQ------------VVSSI--GPEKASYRHCDVRDEKQVE   71 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~~------------~~~~~--~~~~~~~~~~D~~~~~~i~   71 (262)
                      .+|+||||||++|||+++|++|++ +|++|++++|+.+..++            +.+.+  ...++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 99999999988654321            11222  1257889999999999999


Q ss_pred             HHHHHHHHHh-CCcCEEEeCCcCC------------CCCCCc---------------------CCCCHHHHHHHHHHHhh
Q 024839           72 ETVAYAIEKY-GSLDIMYSNAGVA------------GPVGTI---------------------LDLDMAQFDRTIATNLA  117 (262)
Q Consensus        72 ~~~~~~~~~~-~~~d~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~nv~  117 (262)
                      ++++.+.+++ |++|+||||||..            +...++                     .+.+.++|.+.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999872            122344                     36799999999999999


Q ss_pred             HHH-HHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCC
Q 024839          118 GSV-MAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPF  194 (262)
Q Consensus       118 ~~~-~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~  194 (262)
                      +.+ .+++++.+.+..++ .|+||++||..+..+.+.+  .+|++||+|+.+|+|+|+.||+++|||||+|+||++.|++
T Consensus       220 ~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD-GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            987 77887776433333 5899999999998877765  8999999999999999999999999999999999999999


Q ss_pred             CCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee-ceEEeeCCCcccccCcccccc
Q 024839          195 SAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS-GHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~-G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      ..... ....+......|+++...||||++.+.||+++.- |.+ |+...+|++..++.--|+|++
T Consensus       299 ~~~ip-~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~e~~~  362 (422)
T 3s8m_A          299 SAAIP-VMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDWELRD  362 (422)
T ss_dssp             GGGST-HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTTTTSH
T ss_pred             hhcCC-CChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchhhCCH
Confidence            76542 2222233333477889999999999999998753 776 787779999999999998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-41  Score=277.40  Aligned_cols=226  Identities=17%  Similarity=0.170  Sum_probs=192.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   82 (262)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+. ...++.++++|++++++++++++++.++++ 
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999999999  9999999998877665433 345789999999999999999999999998 


Q ss_pred             -CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC------CC----CcEEEEecCCCccCCC
Q 024839           83 -SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN------KI----RGSIICTTSTASTVGG  151 (262)
Q Consensus        83 -~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~------~~----~~~ii~isS~~~~~~~  151 (262)
                       ++|+||||||......++.+.+.++|.+.+++|+.+++.++++++|.|+++      +.    .++||++||..+..+.
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             999999999987435677889999999999999999999999999999765      21    4899999999887765


Q ss_pred             -------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHH
Q 024839          152 -------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       152 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                             +....|++||++++.|+++++.+++++||++++|+||+++|++...                ....+|+|+|+
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~~~~~~~a~  223 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------NAALTVEQSTA  223 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------HHHHH
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------CCCCCHHHHHH
Confidence                   5678999999999999999999999999999999999999998642                13469999999


Q ss_pred             HHHHHcCCCCCceeceEEeeCCCc
Q 024839          225 AALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       225 ~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      .+++++++...+++|+.+.+|||.
T Consensus       224 ~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          224 ELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHhcccccCCCeEEEECCcC
Confidence            999999988888999999999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9e-43  Score=285.96  Aligned_cols=226  Identities=17%  Similarity=0.155  Sum_probs=194.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~   83 (262)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+        ....++++|++++++++++++++.+.+  ++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            35899999999999999999999999999999999876532        235678899999999999999999999  79


Q ss_pred             cCEEEeCCcCCCCCCCc-CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           84 LDIMYSNAGVAGPVGTI-LDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      +|+||||||+.. ..++ .+.+.++|++.+++|+.+++.++++++|.|++   .++||++||..+..+.+....|++||+
T Consensus        73 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           73 VDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             EEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCCCcHHHHHHHH
Confidence            999999999863 4566 67889999999999999999999999999853   489999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHH-HHcCCCCCceec
Q 024839          163 GLLGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAAL-FLASDESAYVSG  239 (262)
Q Consensus       163 a~~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~~~~~~~i~G  239 (262)
                      ++++|+++++.|++  ++||+||+|+||+++|++.......         ....+..+|+|+|+.++ +++++...++||
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G  219 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSG  219 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC---------ccccccCCHHHHHHHHHHHHcCCCcccccc
Confidence            99999999999998  9999999999999999874321110         01134578999999998 555888889999


Q ss_pred             eEEeeCCCccccc
Q 024839          240 HDLVVDGGFTAVT  252 (262)
Q Consensus       240 ~~i~~dgG~~~~~  252 (262)
                      +.|.+|||.....
T Consensus       220 ~~~~v~gg~~~~~  232 (236)
T 1ooe_A          220 ALLKITTENGTST  232 (236)
T ss_dssp             CEEEEEEETTEEE
T ss_pred             cEEEEecCCCccc
Confidence            9999999976543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-41  Score=282.34  Aligned_cols=241  Identities=22%  Similarity=0.288  Sum_probs=200.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.    ..++.++++|++++++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999887776655542    146788999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-CcEEEEecCCCcc--CCCCCCccc
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKI-RGSIICTTSTAST--VGGSGPHAY  157 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~-~~~ii~isS~~~~--~~~~~~~~Y  157 (262)
                      ++++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.+++.|++++. .++||++||..+.  .+.+....|
T Consensus       109 ~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 1xg5_A          109 HSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  187 (279)
T ss_dssp             HCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             CCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence            99999999999986 4567788899999999999999999999999999988652 3899999999887  566677899


Q ss_pred             hhhhHHHHHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          158 TISKHGLLGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +++|++++.|++.++.|++  ++||++++|+||+++|++.............. ..+..++.+|+|+|++++++++++..
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA-TYEQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH-HHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh-hcccccCCCHHHHHHHHHHHhcCCcc
Confidence            9999999999999999998  88999999999999999842211111111111 12345688999999999999998888


Q ss_pred             ceeceEEeeCCC
Q 024839          236 YVSGHDLVVDGG  247 (262)
Q Consensus       236 ~i~G~~i~~dgG  247 (262)
                      +.+|+....++|
T Consensus       267 ~~~g~i~i~~~~  278 (279)
T 1xg5_A          267 IQIGDIQMRPTG  278 (279)
T ss_dssp             EEEEEEEEEETT
T ss_pred             eEeeeEEEccCC
Confidence            888875544443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-41  Score=277.95  Aligned_cols=229  Identities=31%  Similarity=0.399  Sum_probs=195.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .         .++.++++|++++++++++++++ ++++++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE
Confidence            689999999999999999999999999999999875 2         23578999999999999999999 888999999


Q ss_pred             EeCCcCCCCCCCcCCC----CHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-----CCcEEEEecCCCccCCCCCCccch
Q 024839           88 YSNAGVAGPVGTILDL----DMAQFDRTIATNLAGSVMAVKYAARVMVANK-----IRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-----~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      |||||... ..++.+.    +.++|++.+++|+.+++.+++++.+.|.+++     ..++||++||..+..+.+....|+
T Consensus        71 i~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (242)
T 1uay_A           71 VSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  149 (242)
T ss_dssp             EECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhh
Confidence            99999863 3444444    3459999999999999999999999997643     135999999999988888889999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhccc-CCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++|++++.+++.++.|++++||++++|+||+++|++........... .....|. +++.+|+|+++++++++++  .++
T Consensus       150 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~  226 (242)
T 1uay_A          150 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKAS-LAAQVPFPPRLGRPEEYAALVLHILEN--PML  226 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHH-HHTTCCSSCSCCCHHHHHHHHHHHHHC--TTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHH-HHhhCCCcccCCCHHHHHHHHHHHhcC--CCC
Confidence            99999999999999999999999999999999999865543221111 1222355 7789999999999999987  689


Q ss_pred             eceEEeeCCCcccc
Q 024839          238 SGHDLVVDGGFTAV  251 (262)
Q Consensus       238 ~G~~i~~dgG~~~~  251 (262)
                      +|+.|.+|||+++.
T Consensus       227 ~G~~~~v~gG~~~~  240 (242)
T 1uay_A          227 NGEVVRLDGALRMA  240 (242)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             CCcEEEEcCCeecC
Confidence            99999999999763

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.6e-42  Score=318.25  Aligned_cols=236  Identities=26%  Similarity=0.399  Sum_probs=188.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC---------CchhHHHHHhhhCCCceEEEEecCCCHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI---------QDELGNQVVSSIGPEKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   74 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +.+..+++.+++..... ...+|+++.+++++++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999999999999987         55666666665532111 2348999999999999


Q ss_pred             HHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      +++.++++++|+||||||+. ...++.+.+.++|++++++|+.|++.++++++|+|++++ .|+||++||..+..+.+..
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~~~  171 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQ  171 (613)
T ss_dssp             C----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCC
Confidence            99999999999999999987 457888999999999999999999999999999999877 7999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..|++||+|+++|+++|+.|++++||+||+|+||.+ |++........          ..+..+|+|+++.++||+++. 
T Consensus       172 ~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~----------~~~~~~pedvA~~v~~L~s~~-  239 (613)
T 3oml_A          172 VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI----------LFNELKPKLIAPVVAYLCHES-  239 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH----------HHTTCCGGGTHHHHHHTTSTT-
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh----------hhhcCCHHHHHHHHHHhcCCC-
Confidence            999999999999999999999999999999999975 56654433221          123459999999999999998 


Q ss_pred             CceeceEEeeCCCcccccCc
Q 024839          235 AYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~~  254 (262)
                      .++||++|.+|||++....+
T Consensus       240 ~~~tG~~i~vdGG~~~~~~~  259 (613)
T 3oml_A          240 CEDNGSYIESAAGWATKLHM  259 (613)
T ss_dssp             CCCCSCEEEEETTEEEEECC
T ss_pred             cCCCceEEEECCCeEEEEEE
Confidence            89999999999998875444

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.3e-42  Score=286.13  Aligned_cols=223  Identities=17%  Similarity=0.163  Sum_probs=196.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ..+|++|||||++|||+++|++|+++|++|++++|+.+...          ...+.+|++|+++++++++++.++++++|
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD   89 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------DHSFTIKDSGEEEIKSVIEKINSKSIKVD   89 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------SEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------ccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence            45899999999999999999999999999999999977542          23578999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||+......+.+.+.++|.+.+++|+.+++.++++++|.|++   .|+||++||..+..+.+....|++||+|++
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTSGMIAYGATKAATH  166 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence            99999998754444678889999999999999999999999999854   489999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC-CCCceeceEE
Q 024839          166 GLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD-ESAYVSGHDL  242 (262)
Q Consensus       166 ~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~i~G~~i  242 (262)
                      .|+++++.|++  ++||+|++|+||+++|++......         ..+.+++.+|+|+|+.+++|+++ .+.++||++|
T Consensus       167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i  237 (251)
T 3orf_A          167 HIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS---------DANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLV  237 (251)
T ss_dssp             HHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT---------TSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc---------cccccccCCHHHHHHHHHHHhcCccccCCcceEE
Confidence            99999999987  899999999999999987432211         12446788999999999999999 7889999999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      .+++|...
T Consensus       238 ~v~~g~~~  245 (251)
T 3orf_A          238 KFETKSKV  245 (251)
T ss_dssp             EEEEETTE
T ss_pred             EEecCCcc
Confidence            99988654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.3e-41  Score=282.19  Aligned_cols=220  Identities=24%  Similarity=0.334  Sum_probs=175.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||++|||+++|++|+++|++|++++|+.++.+.          . +++|++++++++++++++   .+++|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKC---SKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTC---TTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHh---CCCCCEEE
Confidence            689999999999999999999999999999998765421          1 678999999998888743   37899999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------------------  148 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------------------  148 (262)
                      ||||+....        +.|++.+++|+.+++.++++++|.|++++ .++||++||..+.                    
T Consensus        68 ~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  138 (257)
T 1fjh_A           68 LCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAK  138 (257)
T ss_dssp             ECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred             ECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhh
Confidence            999975311        23899999999999999999999998876 7999999999887                    


Q ss_pred             --------CCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-ccch-HhHHHhhhcccCCCCC
Q 024839          149 --------VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-INDV-EGFVCKVANLKGIVLK  218 (262)
Q Consensus       149 --------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-~~~~-~~~~~~~~~~~~~~~~  218 (262)
                              .+.+....|++||++++.|+++++.+++++||+|++|+||+++|++.... .... .........|.+++.+
T Consensus       139 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (257)
T 1fjh_A          139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE  218 (257)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCC
T ss_pred             hhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCC
Confidence                    34446679999999999999999999999999999999999999987643 1111 1111111336678899


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      |+|+|+.+++++++++.+++|+.+.+|||+++.
T Consensus       219 ~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          219 PSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            999999999999988889999999999998654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.4e-40  Score=281.26  Aligned_cols=188  Identities=22%  Similarity=0.255  Sum_probs=162.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-----chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-----DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +++|++|||||++|||+++|++|+++|++|+++.|+     .+.++++.+.+.  ..++.++++|++|+++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999987765     344444443331  2578999999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-CCCCccc
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-GSGPHAY  157 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-~~~~~~Y  157 (262)
                      ++++++|+||||||+. ..+++.+.+.++|++++++|+.|++.++++++|+|++++ .|+||++||..+... .+....|
T Consensus        83 ~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y  160 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAPY  160 (324)
T ss_dssp             HHHSCCSEEEECCCCC-BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCHHH
T ss_pred             HHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcchhH
Confidence            9999999999999986 567888999999999999999999999999999999877 799999999998844 4667899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS  195 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~  195 (262)
                      ++||+|+++|+++++.|++++||+|++|+||++.|++.
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            99999999999999999999999999999999998764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-39  Score=270.75  Aligned_cols=228  Identities=19%  Similarity=0.184  Sum_probs=198.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC---CeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG---AFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g---~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+.+... ..++.++.+|++++++++++++++.+.
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            4689999999999999999999999999   999999999776543322111 247899999999999999999999999


Q ss_pred             hC--CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC------CC----CcEEEEecCCCcc
Q 024839           81 YG--SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN------KI----RGSIICTTSTAST  148 (262)
Q Consensus        81 ~~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~------~~----~~~ii~isS~~~~  148 (262)
                      ++  ++|+||||||+.....++.+.+.++|.+.+++|+.+++.++++++|.|+++      +.    .++||++||..+.
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence            98  899999999987435678889999999999999999999999999999865      21    4799999999887


Q ss_pred             CCCC---CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHH
Q 024839          149 VGGS---GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA  225 (262)
Q Consensus       149 ~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  225 (262)
                      .+.+   ....|+++|++++.|+++++.+++++||++++|+||+++|++...                ....+|+++++.
T Consensus       178 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~~~~~~~a~~  241 (267)
T 1sny_A          178 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------SAPLDVPTSTGQ  241 (267)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------TCSBCHHHHHHH
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------CCCCCHHHHHHH
Confidence            7653   667899999999999999999999999999999999999998632                135799999999


Q ss_pred             HHHHcCCCCCceeceEEeeCCCc
Q 024839          226 ALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      +++++++....++|+.+.+|||.
T Consensus       242 ~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          242 IVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHhcCcCCCCcEEccCCcC
Confidence            99999988889999999999985

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.2e-40  Score=284.13  Aligned_cols=232  Identities=22%  Similarity=0.224  Sum_probs=185.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH---HhhhC-----CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIG-----PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .+|++|||||++|||+++|++|+++|++|++++|+.+..+..   .+...     ..++.++++|++++++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            378999999999999999999999999998888765543322   22221     2478899999999999999999883


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                        ++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+.+....|+
T Consensus        81 --~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHHH
Confidence              58899999999986 456788899999999999999999999999999998766 79999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-----------h----HHHhhhcccCCC-CCHHHH
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-----------G----FVCKVANLKGIV-LKAKHV  222 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-----------~----~~~~~~~~~~~~-~~~~~v  222 (262)
                      +||++++.|+++++.|++++||+|++|+||+++|++.........           .    .......+.++. .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            999999999999999999999999999999999999754322110           0    000001122333 599999


Q ss_pred             HHHHHHHcCC---CCCceeceEE
Q 024839          223 AEAALFLASD---ESAYVSGHDL  242 (262)
Q Consensus       223 a~~~~~l~~~---~~~~i~G~~i  242 (262)
                      |+.++++++.   ...|++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            9999999875   3457888764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-39  Score=270.20  Aligned_cols=219  Identities=22%  Similarity=0.303  Sum_probs=193.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.+++
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            45789999999999999999999999999999999999887776665552  2478899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|
T Consensus       107 g~iD~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          107 GDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             CCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcC-CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhHHHHH
Confidence            9999999999986 446777888999999999999999999999999998876 79999999999988877788999999


Q ss_pred             HHHHHHHHHHHHHHC---CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          162 HGLLGLVRSAASELG---KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       162 ~a~~~~~~~la~e~~---~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      ++++.|+++++.|++   ++||++++|+||+++|++....           ..+.++..+|+|+|+.+++++.++..
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------STSLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------HHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----------cccccCCCCHHHHHHHHHHHHHcCCC
Confidence            999999999999997   6799999999999999985421           11336788999999999999977643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.3e-40  Score=273.03  Aligned_cols=225  Identities=24%  Similarity=0.273  Sum_probs=163.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|++|||||++|||+++|++|++ |+.|++++|+.+..+++.+ .  .++.++.+|+++.++ .+.+.+..++++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~--~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I--EGVEPIESDIVKEVL-EEGGVDKLKNLDHV   76 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S--TTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h--cCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence            46799999999999999999999987 9999999999888776655 2  458899999998877 44455555667899


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|++++  |+||++||..+..+.+....|++||+|+
T Consensus        77 d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           77 DTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHPGNTIYAASKHAL  153 (245)
T ss_dssp             SEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------CHHHHHHHHHH
T ss_pred             CEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCCCchHHHHHHHHH
Confidence            9999999987 456778889999999999999999999999999997754  8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      +.|+++++.|++++||+||+|+||+++|++..........     ..+.+++.+|+|+|++++|+++....   |+.+++
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~p~dvA~~i~~l~~~~~~---~~~~~i  225 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGT-----NFRPEIYIEPKEIANAIRFVIDAGET---TQITNV  225 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC---------------------CCGGGSCHHHHHHHHHHHHTSCTT---EEEEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhc-----ccccccCCCHHHHHHHHHHHHcCCCc---cceeee
Confidence            9999999999999999999999999999987655332211     12345678999999999999987653   566555


Q ss_pred             C
Q 024839          245 D  245 (262)
Q Consensus       245 d  245 (262)
                      |
T Consensus       226 ~  226 (245)
T 3e9n_A          226 D  226 (245)
T ss_dssp             E
T ss_pred             E
Confidence            5

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.4e-40  Score=287.20  Aligned_cols=249  Identities=14%  Similarity=0.054  Sum_probs=205.4

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCeEEEeeCCchhH------------HHH---HhhhCCCceEEEEecCCCHH
Q 024839            6 LQGKVAIIMGAASGIGEA--TAKLFAEHGAFVIIADIQDELG------------NQV---VSSIGPEKASYRHCDVRDEK   68 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~--ia~~l~~~g~~V~~~~r~~~~~------------~~~---~~~~~~~~~~~~~~D~~~~~   68 (262)
                      ..+|++|||||++|||++  ++++|+++|++|++++|+.+..            +.+   .+..+ .++..+++|+++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG-LVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC-CcEEEEEeeCCCHH
Confidence            569999999999999999  9999999999999999865331            222   22222 57889999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCC------------CCCCCc---------------------CCCCHHHHHHHHHHH
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVA------------GPVGTI---------------------LDLDMAQFDRTIATN  115 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n  115 (262)
                      +++++++++.+++|++|+||||||..            +...++                     .+.+.++|.+.+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            99999999999999999999999973            112333                     457999999999999


Q ss_pred             hhHHH-HHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC--ccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCcc
Q 024839          116 LAGSV-MAVKYAARVMVANKIRGSIICTTSTASTVGGSGP--HAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVA  191 (262)
Q Consensus       116 v~~~~-~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~  191 (262)
                      ..+.+ .+++++.+.+..++ .|+||++||..+..+.+.+  ++|++||+|+++|+++|+.|+++ +|||||+|+||++.
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~  295 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV  295 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence            99988 77777776544444 6899999999999888877  99999999999999999999999 99999999999999


Q ss_pred             CCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          192 TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       192 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      |++...... ...+......++++..++|++++.+.||+++  .+.+|+.+.+|||..++.--|+|.+
T Consensus       296 T~~s~~ip~-~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e~~~  360 (418)
T 4eue_A          296 TKASAYIPT-FPLYAAILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLELRK  360 (418)
T ss_dssp             CHHHHTSTT-HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTTTCH
T ss_pred             ChhhhcCCC-CcHHHHHHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhhcCH
Confidence            998765432 2222222233556778999999999999987  5678999999999999988888865

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-38  Score=271.49  Aligned_cols=219  Identities=24%  Similarity=0.300  Sum_probs=185.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCH-HHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDE-KQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~-~~i~~~~~~~~~~   80 (262)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++..   .++.++++|++++ ++++++++.+.++
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999999888777766632   4789999999998 9999999999999


Q ss_pred             hCCcCEEEeCCcCCCC-----------------------------CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 024839           81 YGSLDIMYSNAGVAGP-----------------------------VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV  131 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~  131 (262)
                      ++++|+||||||+...                             ..++.+.+.++|++.+++|+.|++.+++.++|+|+
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            9999999999998632                             12445678999999999999999999999999998


Q ss_pred             hCCCCcEEEEecCCCccCCC-------------------------------------------CCCccchhhhHHHHHHH
Q 024839          132 ANKIRGSIICTTSTASTVGG-------------------------------------------SGPHAYTISKHGLLGLV  168 (262)
Q Consensus       132 ~~~~~~~ii~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~  168 (262)
                      +++ .++||++||..+..+.                                           +....|++||+|+++|+
T Consensus       169 ~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             cCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            776 7999999999876543                                           34578999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      ++++.++++  |+||+|+||+|.|++....                ...++++.++.+++++..+....+|..+
T Consensus       248 ~~la~e~~~--i~v~~v~PG~v~T~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          248 RVLANKIPK--FQVNCVCPGLVKTEMNYGI----------------GNYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHCTT--SEEEEECCCSBCSGGGTTC----------------CSBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHhhcCC--ceEEEecCCceecCCcCCC----------------CCCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            999999864  9999999999999986532                1258999999999998765554455544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.1e-37  Score=260.53  Aligned_cols=220  Identities=21%  Similarity=0.258  Sum_probs=187.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++.  ..++.++.+|+++.++++++++++.++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3589999999999999999999999 99999999999887776666552  24688999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCC-HHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLD-MAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------  150 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------  150 (262)
                      ++|+||||||.... .. .+.+ .+++++.+++|+.+++.++++++|.|++   .++||++||..+..+           
T Consensus        82 ~id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHhh
Confidence            99999999997632 22 3344 5899999999999999999999998743   479999999876532           


Q ss_pred             ------------------------------CCCCccchhhhHHHHHHHHHHHHHHCC----CCcEEEEEeCCCccCCCCC
Q 024839          151 ------------------------------GSGPHAYTISKHGLLGLVRSAASELGK----HGIRVNCVSPFGVATPFSA  196 (262)
Q Consensus       151 ------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~pG~v~t~~~~  196 (262)
                                                    ......|++||++++.|++.++.++++    +||+|++|+||++.|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                          012378999999999999999999988    7999999999999999864


Q ss_pred             CCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC--CCceeceEEeeCCC
Q 024839          197 GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE--SAYVSGHDLVVDGG  247 (262)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~--~~~i~G~~i~~dgG  247 (262)
                      .                .+..+|+|+|+.++++++.+  ..+++|+.|. +++
T Consensus       237 ~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                23579999999999999855  3699999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.4e-36  Score=256.02  Aligned_cols=217  Identities=24%  Similarity=0.250  Sum_probs=185.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +..++.++.+|++|+++++++++++.+++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999999999999988877665554   22368899999999999999999999999


Q ss_pred             CCcCEEEeC-CcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           82 GSLDIMYSN-AGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~-ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      +++|+|||| +|.. . ..+.+.+.++|.+.+++|+.+++.++++++|.|+++  .|+||++||..+..+.+....|++|
T Consensus       105 g~iD~li~naag~~-~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  180 (286)
T 1xu9_A          105 GGLDMLILNHITNT-S-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSAS  180 (286)
T ss_dssp             TSCSEEEECCCCCC-C-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCccCC-C-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCCCccHHHHH
Confidence            999999999 5654 2 345567899999999999999999999999998764  4899999999999998889999999


Q ss_pred             hHHHHHHHHHHHHHH--CCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASEL--GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |++++.|+++++.|+  ...||++++++||+++|++.......      .   ......+|+++|+.++..+....
T Consensus       181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~------~---~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG------I---VHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG------G---GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc------c---ccCCCCCHHHHHHHHHHHHhcCC
Confidence            999999999999999  67899999999999999875321111      0   11235799999999999886543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=7.5e-37  Score=301.88  Aligned_cols=240  Identities=21%  Similarity=0.207  Sum_probs=196.7

Q ss_pred             CCCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhh----C--CCceEEEEecCCCHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASG-IGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSI----G--PEKASYRHCDVRDEKQVEETVA   75 (262)
Q Consensus         4 ~~~~~k~~lItG~s~g-iG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~----~--~~~~~~~~~D~~~~~~i~~~~~   75 (262)
                      ++++||++|||||++| ||+++|++|+++|++|+++ +|+.+..+++.+++    .  ..++.+++||++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4678999999999998 9999999999999999998 57666665544433    2  2578899999999999999999


Q ss_pred             HHHHH-----hC-CcCEEEeCCcCCCCCC-CcCCCC--HHHHHHHHHHHhhHHHHHHHHH--HHHHHhCCCCcEEEEecC
Q 024839           76 YAIEK-----YG-SLDIMYSNAGVAGPVG-TILDLD--MAQFDRTIATNLAGSVMAVKYA--ARVMVANKIRGSIICTTS  144 (262)
Q Consensus        76 ~~~~~-----~~-~~d~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~l~~~~--~~~~~~~~~~~~ii~isS  144 (262)
                      ++.++     +| ++|+||||||+. ... ++.+.+  .++|.+++++|+.+++.+++.+  +|.|++++ .|+||++||
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~-~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnISS  828 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSP  828 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCC-CCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEECS
T ss_pred             HHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEEcC
Confidence            99988     66 999999999986 345 788888  8999999999999999999987  67776654 689999999


Q ss_pred             CCccCCCCCCccchhhhHHHHHH-HHHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCCHHHH
Q 024839          145 TASTVGGSGPHAYTISKHGLLGL-VRSAASELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHV  222 (262)
Q Consensus       145 ~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  222 (262)
                      ..+..+  ....|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|..... ........  .+. +..+|+|+
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-~~~~~~~~--~pl-r~~sPEEV  901 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIEK--MGV-RTFSQKEM  901 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-TTHHHHHT--TSC-CCEEHHHH
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-hHHHHHHh--cCC-CCCCHHHH
Confidence            998877  577999999999999 99999999988 999999999999 78865421 11111111  232 56799999


Q ss_pred             HHHHHHHcCCC-CCceeceEEeeC--CCccccc
Q 024839          223 AEAALFLASDE-SAYVSGHDLVVD--GGFTAVT  252 (262)
Q Consensus       223 a~~~~~l~~~~-~~~i~G~~i~~d--gG~~~~~  252 (262)
                      |+.++||+++. +.++||+.|.+|  ||+....
T Consensus       902 A~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          902 AFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             HHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             HHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence            99999999987 679999999875  9987654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-37  Score=298.17  Aligned_cols=241  Identities=20%  Similarity=0.200  Sum_probs=199.3

Q ss_pred             CCCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEe-eCCchhHHHHHhhh----C--CCceEEEEecCCCHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASG-IGEATAKLFAEHGAFVIIA-DIQDELGNQVVSSI----G--PEKASYRHCDVRDEKQVEETVA   75 (262)
Q Consensus         4 ~~~~~k~~lItG~s~g-iG~~ia~~l~~~g~~V~~~-~r~~~~~~~~~~~~----~--~~~~~~~~~D~~~~~~i~~~~~   75 (262)
                      +++++|++|||||++| ||+++|++|+++|++|+++ +|+.+..++..+++    .  ..++.++++|++|+++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4578999999999998 9999999999999999998 57666665555544    1  2468899999999999999999


Q ss_pred             HHHHH-----hC-CcCEEEeCCcCCCCCC-CcCCCC--HHHHHHHHHHHhhHHHHHHHHH--HHHHHhCCCCcEEEEecC
Q 024839           76 YAIEK-----YG-SLDIMYSNAGVAGPVG-TILDLD--MAQFDRTIATNLAGSVMAVKYA--ARVMVANKIRGSIICTTS  144 (262)
Q Consensus        76 ~~~~~-----~~-~~d~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~l~~~~--~~~~~~~~~~~~ii~isS  144 (262)
                      ++.++     ++ ++|+||||||+. ... ++.+.+  .++|.+++++|+.+++.+++.+  .|.|++++ .|+||++||
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~-~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVnISS  629 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSP  629 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCC-CCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCCCCS
T ss_pred             HHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEEEEC
Confidence            99988     77 899999999986 345 778888  8999999999999999999988  77787655 689999999


Q ss_pred             CCccCCCCCCccchhhhHHHHHH-HHHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCCHHHH
Q 024839          145 TASTVGGSGPHAYTISKHGLLGL-VRSAASELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHV  222 (262)
Q Consensus       145 ~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  222 (262)
                      ..+..+  ...+|++||+|+++| .+.++.+++++ |+||+|+||+++ |++..... .......  ..+ .+..+|+|+
T Consensus       630 iAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e-~~~~~l~--~ip-lR~~sPEEV  702 (1688)
T 2pff_A          630 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIE--KMG-VRTFSQKEM  702 (1688)
T ss_dssp             CTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTT-TCSTTTS--SSS-CCCCCCCTT
T ss_pred             hHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCch-HHHHHHH--hCC-CCCCCHHHH
Confidence            998877  567999999999999 88889999887 999999999999 78765311 0001111  112 256699999


Q ss_pred             HHHHHHHcCCC-CCceeceEEeeC--CCcccccC
Q 024839          223 AEAALFLASDE-SAYVSGHDLVVD--GGFTAVTN  253 (262)
Q Consensus       223 a~~~~~l~~~~-~~~i~G~~i~~d--gG~~~~~~  253 (262)
                      |+.++||+++. +.++||+.+.+|  ||+.....
T Consensus       703 A~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~d  736 (1688)
T 2pff_A          703 AFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPE  736 (1688)
T ss_dssp             HHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSS
T ss_pred             HHHHHHHhCCCccccccCcEEEEEcCCCeeecCC
Confidence            99999999988 679999999875  99876543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.7e-36  Score=250.59  Aligned_cols=220  Identities=28%  Similarity=0.298  Sum_probs=180.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||+++||++++++|+++|++|++++|+.+..+.           .+.+|++++++++++++++   .+++|+||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRC---GGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHH---TTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHc---CCCccEEE
Confidence            689999999999999999999999999999998765321           1678999999998888754   36899999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------------  151 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------------  151 (262)
                      ||||....        .+++.+.+++|+.+++.+++++.+.|++++ .++||++||..+..+.                 
T Consensus        68 ~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  138 (255)
T 2dkn_A           68 CCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEAR  138 (255)
T ss_dssp             ECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHH
T ss_pred             ECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhh
Confidence            99997531        124889999999999999999999998776 6899999999887654                 


Q ss_pred             ---------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhc-ccCCCCCHH
Q 024839          152 ---------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVAN-LKGIVLKAK  220 (262)
Q Consensus       152 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~  220 (262)
                               +....|+.+|++++.+++.++.+++++|+++++++||++.|++....... .......... +.+++.+++
T Consensus       139 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
T 2dkn_A          139 AIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPR  218 (255)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHH
T ss_pred             hhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHH
Confidence                     45678999999999999999999999999999999999999875432111 1111111101 556789999


Q ss_pred             HHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          221 HVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       221 ~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      |+|+++++++++++.+++|+.+++|||..++
T Consensus       219 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          219 EVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            9999999999887778999999999998764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=9.3e-36  Score=293.58  Aligned_cols=239  Identities=21%  Similarity=0.192  Sum_probs=195.4

Q ss_pred             CCCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEee-CCchhHHHHH----hhhC--CCceEEEEecCCCHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASG-IGEATAKLFAEHGAFVIIAD-IQDELGNQVV----SSIG--PEKASYRHCDVRDEKQVEETVA   75 (262)
Q Consensus         4 ~~~~~k~~lItG~s~g-iG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~----~~~~--~~~~~~~~~D~~~~~~i~~~~~   75 (262)
                      ++++||++|||||++| ||+++|++|+++|++|++++ |+.+...+..    +++.  ..++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3578999999999999 99999999999999999985 5555554333    3333  2578899999999999999999


Q ss_pred             HHHHH---hC-CcCEEEeCCcCCCCCC-CcCCCC--HHHHHHHHHHHhhHHHHHHHH--HHHHHHhCCCCcEEEEecCCC
Q 024839           76 YAIEK---YG-SLDIMYSNAGVAGPVG-TILDLD--MAQFDRTIATNLAGSVMAVKY--AARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        76 ~~~~~---~~-~~d~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~l~~~--~~~~~~~~~~~~~ii~isS~~  146 (262)
                      ++.++   +| ++|+||||||+.. .. ++.+.+  .++|.+++++|+.+++.+++.  +++.|++++ .|+||++||..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS~a  805 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSPNH  805 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECSCS
T ss_pred             HHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcchh
Confidence            99988   88 9999999999863 44 788888  899999999999999999877  677776554 68999999999


Q ss_pred             ccCCCCCCccchhhhHHHHHHHHHHHH-HHCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCCHHHHHH
Q 024839          147 STVGGSGPHAYTISKHGLLGLVRSAAS-ELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       147 ~~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                      +..+  ....|++||+++++|++.++. +++++ |+||+|+||+++ |+|.... ........  ..+. +..+|+|+++
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~-~~~~~~~~--~~pl-r~~sPeEVA~  878 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN-NLVAEGVE--KLGV-RTFSQQEMAF  878 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH-HHTHHHHH--TTTC-CCBCHHHHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc-hhhHHHHH--hcCC-CCCCHHHHHH
Confidence            8877  467999999999999987655 58777 999999999999 9986431 11111111  1122 5669999999


Q ss_pred             HHHHHcCCCC-CceeceEEee--CCCcccc
Q 024839          225 AALFLASDES-AYVSGHDLVV--DGGFTAV  251 (262)
Q Consensus       225 ~~~~l~~~~~-~~i~G~~i~~--dgG~~~~  251 (262)
                      .++||+++.+ .++||+.+.+  |||+...
T Consensus       879 avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          879 NLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            9999999886 7999999986  5998765

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.3e-35  Score=237.40  Aligned_cols=200  Identities=21%  Similarity=0.212  Sum_probs=174.8

Q ss_pred             CC-EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GK-VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k-~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +| ++|||||+++||++++++|+ +|++|++++|+.+               .+++|++++++++++++.+    +++|+
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~----~~~d~   61 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQV----GKVDA   61 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHH----CCEEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHh----CCCCE
Confidence            45 79999999999999999999 9999999999864               3789999999999988765    78999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||.. ...++.+.+.++|.+.+++|+.+++.+++++.+.|.+   .++||++||..+..+.+....|+++|++++.
T Consensus        62 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  137 (202)
T 3d7l_A           62 IVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTA  137 (202)
T ss_dssp             EEECCCCC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCCCccHHHHHHHHHHHH
Confidence            99999976 4567788999999999999999999999999988743   4899999999998888888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +++.++.|+ ++||++++++||+++|++...          ....+.+++++++|+|+.+++++.   .+++|+.+++|
T Consensus       138 ~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~----------~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          138 FAKSAAIEM-PRGIRINTVSPNVLEESWDKL----------EPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHTTSC-STTCEEEEEEECCBGGGHHHH----------GGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEEC
T ss_pred             HHHHHHHHc-cCCeEEEEEecCccCCchhhh----------hhhccccCCCCHHHHHHHHHHhhh---ccccCceEecC
Confidence            999999999 789999999999999986310          111244678899999999999883   46899999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=6e-35  Score=234.29  Aligned_cols=201  Identities=20%  Similarity=0.220  Sum_probs=171.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||++|||++++++|+++  +|++++|+.+..+++.+++..   .++++|++|++++++++++    ++++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~----~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAKALLEE----AGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHHHHHHH----HCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHHHHHHh----cCCCCEEE
Confidence            68999999999999999999998  999999998888777766653   7889999999999998886    68999999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      ||||.. ...++.+.+.++|.+.+++|+.+++.+++++    ++++ .++||++||..+..+.+....|+++|++++.++
T Consensus        72 ~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  145 (207)
T 2yut_A           72 HAVGKA-GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYL  145 (207)
T ss_dssp             ECCCCC-CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHH
T ss_pred             ECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccCCCCcchHHHHHHHHHHHH
Confidence            999976 4567778889999999999999999999987    2333 589999999999888888999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +.++.+++++||++++++||++.|++...           ...+.+++++|+|+|++++++++++..
T Consensus       146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-----------~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          146 EAARKELLREGVHLVLVRLPAVATGLWAP-----------LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCBCSGGGGG-----------GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHhhhCCEEEEEecCcccCCCccc-----------cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999987321           112447789999999999999987653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=6.2e-33  Score=251.11  Aligned_cols=219  Identities=14%  Similarity=0.098  Sum_probs=180.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEe-eCCc-------------hhHHHHHhhhC--CCceEEEEecCCCHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIA-DIQD-------------ELGNQVVSSIG--PEKASYRHCDVRDEKQ   69 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~-~r~~-------------~~~~~~~~~~~--~~~~~~~~~D~~~~~~   69 (262)
                      .+|++|||||++|||+++|++|+++|+. |+++ +|+.             +..+++.+++.  ..++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5899999999999999999999999998 7777 8883             44445555442  2578999999999999


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV  149 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~  149 (262)
                      ++++++++. +++++|+||||||+. ....+.+.+.++|.+++++|+.|++++.+.+.+.+++++..++||++||..+..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999998 789999999999987 457888999999999999999999999999999987654358999999999999


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      +.++...|+++|+++++|+    .+++.+||++++|+||+++|+|.....  ......   ......++|+++++.+.++
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~--~~~~~~---~~g~~~l~pee~a~~l~~~  478 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGA--TGERLR---RLGLRPLAPATALTALDTA  478 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSH--HHHHHH---HTTBCCBCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchh--hHHHHH---hcCCCCCCHHHHHHHHHHH
Confidence            9999999999999999885    566788999999999999999874321  111111   1223568999999999999


Q ss_pred             cCCCCCc
Q 024839          230 ASDESAY  236 (262)
Q Consensus       230 ~~~~~~~  236 (262)
                      ++.+...
T Consensus       479 l~~~~~~  485 (525)
T 3qp9_A          479 LGHGDTA  485 (525)
T ss_dssp             HHHTCSE
T ss_pred             HhCCCCe
Confidence            9776543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=7e-32  Score=277.58  Aligned_cols=238  Identities=16%  Similarity=0.135  Sum_probs=181.7

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhhCC--CceEEEEecCCCHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASG-IGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSIGP--EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         5 ~~~~k~~lItG~s~g-iG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++..  .++..+++|+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            478999999999999 9999999999999999999998776     5666666643  4678899999999999999999


Q ss_pred             HHH----HhCCcCEEEeCCcC----CCCCCCcCCCCHHHH----HHHHHHHhhHHHHHHHHHHHHHHhCCCC---cEEEE
Q 024839           77 AIE----KYGSLDIMYSNAGV----AGPVGTILDLDMAQF----DRTIATNLAGSVMAVKYAARVMVANKIR---GSIIC  141 (262)
Q Consensus        77 ~~~----~~~~~d~li~~ag~----~~~~~~~~~~~~~~~----~~~~~~nv~~~~~l~~~~~~~~~~~~~~---~~ii~  141 (262)
                      +.+    ++|++|+||||||+    ........+.+.++|    +..+++|+.+++.+++.+.+.|..++..   +.++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    88999999999997    211122233344444    4459999999999999999999876521   23334


Q ss_pred             ecCCCccCCCCCCccchhhhHHHHHHHHHHHHH--HCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCC
Q 024839          142 TTSTASTVGGSGPHAYTISKHGLLGLVRSAASE--LGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLK  218 (262)
Q Consensus       142 isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
                      .++..+..  +...+|++||+|+++|+|+++.|  +++ +|+||+++||++. |++...... .......  .+ .+..+
T Consensus      2293 ~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~-~~~~~~~--~~-~r~~~ 2365 (3089)
T 3zen_D         2293 GSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA-IVSAVEE--AG-VTTYT 2365 (3089)
T ss_dssp             ECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT-THHHHGG--GS-CBCEE
T ss_pred             CCcccccC--CCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh-HHHHHHh--cC-CCCCC
Confidence            44433332  34568999999999999999999  765 6999999999998 766543221 1111111  22 34459


Q ss_pred             HHHHHHHHHHHcCCCCCce-eceEEeeC--CCcc
Q 024839          219 AKHVAEAALFLASDESAYV-SGHDLVVD--GGFT  249 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i-~G~~i~~d--gG~~  249 (262)
                      |+|||..++||+++.+.++ +|+.+.+|  ||+.
T Consensus      2366 PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2366 TDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             HHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            9999999999999987755 56666655  9984

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=1.6e-30  Score=233.08  Aligned_cols=214  Identities=17%  Similarity=0.237  Sum_probs=171.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCch---hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDE---LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +|++|||||++|||+++|++|+++|+ +|++++|+..   ..+++.+++.  ..++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999998 7889998743   3444444442  257899999999999999999998776 


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+.....++.+.+.++|.+++++|+.+++++.+.+.+.    . .++||++||..+..+.++...|+++|
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcCCCCCcHHHHHHH
Confidence            789999999998745678889999999999999999999998876542    3 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      ++++.|++.++    .+||++++|+||++.++......... .....   .....++|++.++.+.+++..+..
T Consensus       393 a~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~~~-~~l~~---~g~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          393 AYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPEVH-DRLVR---QGVLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECEESSSCC------C-HHHHH---TTEEEECHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHH----hcCCeEEEEECCcccCCccccChHHH-HHHHh---cCCCCCCHHHHHHHHHHHHcCCCc
Confidence            99999887554    46999999999999765443221111 11111   112246999999999999976654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=5.7e-30  Score=241.72  Aligned_cols=217  Identities=14%  Similarity=0.223  Sum_probs=173.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCC-eEEEeeCC---chhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFA-EHGA-FVIIADIQ---DELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~-~~g~-~V~~~~r~---~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++|+   .+..+++.+++.  ..++.+++||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 7998 49999998   344555555552  25789999999999999999999987


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      .+ ++|+||||||+. ....+.+++.++|++.+++|+.|++++.+++.|.|       +||++||..+..+.+++++|++
T Consensus       609 ~~-~id~lVnnAGv~-~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVL-DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCC-CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 899999999997 45788999999999999999999999999886543       8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+    |+++|+.+++++||++|+|+||++.|++......+  .............+++++....+...+..+...+.
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~--~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~~~~~  752 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLRE--AEQDRLARSGLLPISTEEGLSQFDAACGGAHTVVA  752 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHH--HHHHHHHHTTBCCCCHHHHHHHHHHHHTSSCSSCC
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccH--HHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCcEEE
Confidence            996    55666667777899999999999998754322111  11111112223456888888888877766554433

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=7.4e-29  Score=202.90  Aligned_cols=204  Identities=16%  Similarity=0.167  Sum_probs=159.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCce-EEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKA-SYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+    .++ .++++|++  ++       +.+.++
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~--~~-------~~~~~~   83 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLE--ED-------FSHAFA   83 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTT--SC-------CGGGGT
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccH--HH-------HHHHHc
Confidence            35789999999999999999999999999999999999887766543    357 89999999  33       333445


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---CCCccchh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---SGPHAYTI  159 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~~~~~Y~~  159 (262)
                      ++|+||||||...         .+++.+.+++|+.++..+++++..    .+ .++||++||..+..+.   +....|+.
T Consensus        84 ~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~  149 (236)
T 3e8x_A           84 SIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAEK----RG-IKRFIMVSSVGTVDPDQGPMNMRHYLV  149 (236)
T ss_dssp             TCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHH----HT-CCEEEEECCTTCSCGGGSCGGGHHHHH
T ss_pred             CCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHHH----cC-CCEEEEEecCCCCCCCCChhhhhhHHH
Confidence            8999999999752         135889999999999999998743    34 6899999998776654   45679999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +|++++.+++       ..|++++.++||++.++..........     .......+++++|+|++++++++++.  .+|
T Consensus       150 sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~-----~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  215 (236)
T 3e8x_A          150 AKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP-----HFSEITRSITRHDVAKVIAELVDQQH--TIG  215 (236)
T ss_dssp             HHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES-----SCSCCCCCEEHHHHHHHHHHHTTCGG--GTT
T ss_pred             HHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc-----CCCcccCcEeHHHHHHHHHHHhcCcc--ccC
Confidence            9999999876       469999999999999987543322111     11122567899999999999997654  679


Q ss_pred             eEEeeCCCc
Q 024839          240 HDLVVDGGF  248 (262)
Q Consensus       240 ~~i~~dgG~  248 (262)
                      +.+++++|.
T Consensus       216 ~~~~v~~~~  224 (236)
T 3e8x_A          216 KTFEVLNGD  224 (236)
T ss_dssp             EEEEEEECS
T ss_pred             CeEEEeCCC
Confidence            999998873

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=7.8e-28  Score=200.52  Aligned_cols=184  Identities=16%  Similarity=0.140  Sum_probs=153.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|++|||||+++||++++++|+++|++|++++|+.....       ..++.++.+|++|+++++++++       ++|+
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   67 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNAMVA-------GCDG   67 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            4689999999999999999999999999999999876543       2578899999999999998887       7999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc------------CCCCCC
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST------------VGGSGP  154 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~~  154 (262)
                      ||||||..         ..++|++++++|+.+++.+++++.+    ++ .++||++||..+.            .+.+..
T Consensus        68 vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~  133 (267)
T 3rft_A           68 IVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAARA----HG-QPRIVFASSNHTIGYYPQTERLGPDVPARPD  133 (267)
T ss_dssp             EEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC
T ss_pred             EEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCC
Confidence            99999974         2235789999999999999998843    34 6899999998776            233455


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..|+.||++.+.+++.++.++   |++++.|+||.+.+++.....             ...+++++|+++.+..++..+.
T Consensus       134 ~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~-------------~~~~~~~~d~a~~~~~~~~~~~  197 (267)
T 3rft_A          134 GLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM-------------LSTWFSHDDFVSLIEAVFRAPV  197 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH-------------HHHBCCHHHHHHHHHHHHHCSC
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc-------------eeeEEcHHHHHHHHHHHHhCCC
Confidence            789999999999999999885   899999999999987643221             1224689999999999987653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=6.7e-28  Score=216.48  Aligned_cols=211  Identities=17%  Similarity=0.226  Sum_probs=167.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCch---hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDE---LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|||||++|||++++++|+++|+. |++++|+.+   ..+++.+++.  ..++.++.||++|+++++++++.+ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            4789999999999999999999999995 999999865   2334444332  257899999999999999999988 55


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ....+.+.+.+++.+++++|+.+++++.+.+.+    .+ .++||++||..+..+.++...|+++
T Consensus       304 ~g~ld~VIh~AG~~-~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~g~~g~~~Yaaa  377 (486)
T 2fr1_A          304 DVPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFGAPGLGGYAPG  377 (486)
T ss_dssp             TSCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cCCCcEEEECCccC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcCCCCCCHHHHHH
Confidence            68999999999987 456788899999999999999999999987643    33 6899999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC-CCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATP-FSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |++++.|++.++    .+|+++++|+||++.++ |.....      ...........++++++++.+.+++....
T Consensus       378 ka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~------~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          378 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV------ADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC------------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH------HHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999876554    46999999999999876 432211      01111111236799999999999997654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=6.9e-27  Score=210.77  Aligned_cols=208  Identities=16%  Similarity=0.207  Sum_probs=168.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCch---hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDE---LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+|++|||||++|||++++++|+++|+ +|++++|+.+   ..+++.+++.  ..++.++.||++|.++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            479999999999999999999999999 5899999864   2344444443  25789999999999999998876    


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       +++|+||||||+. ....+.+.+.+++.+++++|+.+++++.+.+.+.   .+ .++||++||..+..+.++...|+++
T Consensus       334 -~~ld~VVh~AGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~-~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 -YPPNAVFHTAGIL-DDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KG-LDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             -SCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TT-CCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             -CCCcEEEECCccc-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cC-CCEEEEEeCHHhcCCCCCCHHHHHH
Confidence             6899999999987 4567788999999999999999999998865321   13 6899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCc-cCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGV-ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |++++.|++.+    ...|+++++|+||++ .|+|.....   .....   ......++++++++.+..++..+.
T Consensus       408 Ka~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~---~~~~~---~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          408 NAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAG---EESLS---RRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHH---HHHHH---HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHH----HHcCCcEEEEECCcccCCccccccc---HHHHH---hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999865    356999999999999 777764321   11111   122346899999999999997654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=6.6e-27  Score=201.83  Aligned_cols=218  Identities=14%  Similarity=0.119  Sum_probs=171.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+|+||++++++|+++ |+ +|++++|+..+...+.+.+...++.++.+|++|.+++.++++       +
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   91 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------G   91 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------T
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------c
Confidence            57899999999999999999999999 97 999999998877777776665689999999999998887765       7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+|||+||....  +   ....+..+.+++|+.++..+++++.+.    + .+++|++||..+..|   ...|+.+|++
T Consensus        92 ~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~p---~~~Y~~sK~~  158 (344)
T 2gn4_A           92 VDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAANP---INLYGATKLC  158 (344)
T ss_dssp             CSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSSC---CSHHHHHHHH
T ss_pred             CCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCCC---ccHHHHHHHH
Confidence            9999999997521  1   122345689999999999999988763    3 679999999876654   4689999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh--------cccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA--------NLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .+.+++.++.++++.|+++++++||.+.++... ..+..........        ...+.+++++|+++++++++...  
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~--  235 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM--  235 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc--
Confidence            999999999988888999999999999987521 1111111111100        01123679999999999999754  


Q ss_pred             ceeceEEeeCCC
Q 024839          236 YVSGHDLVVDGG  247 (262)
Q Consensus       236 ~i~G~~i~~dgG  247 (262)
                       ..|+.++++++
T Consensus       236 -~~g~~~~~~~~  246 (344)
T 2gn4_A          236 -HGGEIFVPKIP  246 (344)
T ss_dssp             -CSSCEEEECCC
T ss_pred             -cCCCEEecCCC
Confidence             25888888876

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=3.4e-26  Score=185.20  Aligned_cols=193  Identities=10%  Similarity=0.074  Sum_probs=147.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|++|||||+++||++++++|+ ++|++|++++|+.+ +.+++.+  ...++.++++|++|+++++++++       ++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVT-------NAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHc-------CCC
Confidence            4789999999999999999999 89999999999987 6655431  23578899999999999988876       789


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc----------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH----------  155 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~----------  155 (262)
                      +||||+|..                    |+.     ++.+++.|++.+ .++||++||..+..+.+...          
T Consensus        76 ~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           76 VVFVGAMES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             EEEESCCCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             EEEEcCCCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCCCCccccccccccccc
Confidence            999999852                    222     777888888776 78999999998877654333          


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHc--CCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA--SDE  233 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--~~~  233 (262)
                      .|+.+|.+++.+++.       .|++++.|+||++.++..........    ......+..++++|+|+++++++  +++
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~----~~~~~~~~~~~~~dvA~~~~~l~~~~~~  198 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP----EGAQFNDAQVSREAVVKAIFDILHAADE  198 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC----TTSCCCCCEEEHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc----CCccCCCceeeHHHHHHHHHHHHHhcCh
Confidence            899999999988763       69999999999998873222211110    00112244789999999999999  887


Q ss_pred             CCceeceEEeeCCC
Q 024839          234 SAYVSGHDLVVDGG  247 (262)
Q Consensus       234 ~~~i~G~~i~~dgG  247 (262)
                      +.++++. +.+++.
T Consensus       199 ~~~~~~~-~~i~~~  211 (221)
T 3r6d_A          199 TPFHRTS-IGVGEP  211 (221)
T ss_dssp             GGGTTEE-EEEECT
T ss_pred             hhhhcce-eeecCC
Confidence            7665554 555444

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.94  E-value=1.7e-26  Score=196.88  Aligned_cols=217  Identities=17%  Similarity=0.136  Sum_probs=165.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .+.+++|||||+|+||++++++|+++|++|++++|+.+. +.    +   ++.++.+|++|+++++++++.     +++|
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---~~~~~~~Dl~d~~~~~~~~~~-----~~~d   76 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---NVEMISLDIMDSQRVKKVISD-----IKPD   76 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---TEEEEECCTTCHHHHHHHHHH-----HCCS
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---eeeEEECCCCCHHHHHHHHHh-----cCCC
Confidence            356899999999999999999999999999999998664 21    2   578899999999999988875     3799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-------------C
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-------------S  152 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-------------~  152 (262)
                      +|||+||....     +.+.+++.+.+++|+.++..+++++ +.+  ++ .++||++||...+.+.             .
T Consensus        77 ~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~  147 (321)
T 2pk3_A           77 YIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NL-DCRILTIGSSEEYGMILPEESPVSEENQLR  147 (321)
T ss_dssp             EEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred             EEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence            99999997521     1223467899999999999999988 544  23 5799999998654322             3


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cch-HhHHH---h---h------hcccCCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDV-EGFVC---K---V------ANLKGIVL  217 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~-~~~~~---~---~------~~~~~~~~  217 (262)
                      ....|+.+|++.+.+++.++.++   |++++.++||.+.+|......  ... .....   .   .      ..+...++
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v  224 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT  224 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeE
Confidence            46789999999999999999874   899999999999998764321  111 11111   1   0      01123467


Q ss_pred             CHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      .++|+|+++++++.++   .+|+.+++++|..+
T Consensus       225 ~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          225 DVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             EHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             EHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            9999999999999764   46899999998654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=3e-27  Score=193.79  Aligned_cols=197  Identities=13%  Similarity=0.047  Sum_probs=150.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +.+|++|||||+|+||++++++|+++|+  +|++++|+.+.......    .++.++.+|++++++++++++       +
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~-------~   84 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY----KNVNQEVVDFEKLDDYASAFQ-------G   84 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG----GGCEEEECCGGGGGGGGGGGS-------S
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc----CCceEEecCcCCHHHHHHHhc-------C
Confidence            4689999999999999999999999999  99999998765432211    357889999999988887765       7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||...        ..+++.+.+++|+.++..+++++.    +.+ .++||++||..+..+  ....|+.+|++
T Consensus        85 ~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~----~~~-~~~iv~~SS~~~~~~--~~~~Y~~sK~~  149 (242)
T 2bka_A           85 HDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK----AGG-CKHFNLLSSKGADKS--SNFLYLQVKGE  149 (242)
T ss_dssp             CSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             CCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHH----HCC-CCEEEEEccCcCCCC--CcchHHHHHHH
Confidence            999999999641        224578899999999988887643    444 689999999887653  45689999999


Q ss_pred             HHHHHHHHHHHHCCCCc-EEEEEeCCCccCCCCCCCccchHhHHHhhhcc----cCCCCCHHHHHHHHHHHcCCCCC
Q 024839          164 LLGLVRSAASELGKHGI-RVNCVSPFGVATPFSAGTINDVEGFVCKVANL----KGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      ++.+++.+       ++ ++++++||++.||..................|    .+++++++|+|++++++++++..
T Consensus       150 ~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          150 VEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            99998753       56 79999999999986432211110000000112    35678999999999999987754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=1.4e-26  Score=198.98  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=166.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+   ...++.++.+|++|+++++++++.     .+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4689999999999999999999999999999999866554443333   225688999999999999998875     47


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GS  152 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~  152 (262)
                      +|+|||+||....     ....++..+.+++|+.++..+++++    ++.+ .++||++||...+..           ..
T Consensus        79 ~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVM----RERA-VKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHH----HhCC-CCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999997521     1123445678899999998877654    4444 679999999765422           22


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--------ccchHhHHHh----h-h---------
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--------INDVEGFVCK----V-A---------  210 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~----~-~---------  210 (262)
                      ....|+.+|.+.+.+++.++.++.  +++++.++|+.+.+|.....        ..........    . .         
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            346899999999999999999863  59999999999988743211        0111111111    0 0         


Q ss_pred             -----cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 -----NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 -----~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                           .....++.++|+++++++++........|+.+++++|..+
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                 0112367889999999999865222346899999988654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.94  E-value=5.2e-26  Score=195.06  Aligned_cols=219  Identities=13%  Similarity=0.057  Sum_probs=164.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCch--hHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDE--LGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|||||+|+||++++++|+++|  ++|++++|...  ..+.+ +.+. ..++.++.+|++|++++++++.       
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR-------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh-------
Confidence            5679999999999999999999997  89999988642  22222 2222 3478899999999999888873       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------CC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------GG  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~  151 (262)
                      ++|+|||+||....     +.+.+++.+.+++|+.++..+++++.+.   .. .++||++||...+.           +.
T Consensus        75 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~  145 (336)
T 2hun_A           75 KVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE---NP-EVRFVHVSTDEVYGDILKGSFTENDRL  145 (336)
T ss_dssp             TCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CT-TSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred             CCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-CcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence            79999999996421     2244567889999999999999998875   22 47999999975432           23


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh----hh-------cccCCCCCHH
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK----VA-------NLKGIVLKAK  220 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~  220 (262)
                      .....|+.+|++.+.+++.++.++   |++++.++||.+.+|...... ........    ..       .....++.++
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEK-LIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTS-HHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCc-hHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            345689999999999999999884   899999999999998753211 11111111    00       0123467899


Q ss_pred             HHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          221 HVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       221 ~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++++++++.+.   .+|+.+++++|..+
T Consensus       222 Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          222 DHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            9999999999653   36999999998654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=5.5e-26  Score=195.59  Aligned_cols=222  Identities=14%  Similarity=0.112  Sum_probs=165.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |++|||||+|+||++++++|+++|++|++++|.. +......+.+. ..++.++.+|++++++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999998853 22222222221 245889999999999999888752     6999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------------  149 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------------  149 (262)
                      |||+||....     +.+.+++.+.+++|+.++..+++++.+..   . +++||++||...+.                 
T Consensus        77 vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~---~-~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN---S-NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC---T-TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC---C-CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999996421     22345788999999999999999988753   1 36999999976432                 


Q ss_pred             ----------CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHhH----HHhh----
Q 024839          150 ----------GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEGF----VCKV----  209 (262)
Q Consensus       150 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~----~~~~----  209 (262)
                                +......|+.+|.+.+.+++.++.++   |++++.++||.+.+|.......  .....    ....    
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                      12345689999999999999999886   8999999999999987543211  01111    1111    


Q ss_pred             -hc-cc------CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          210 -AN-LK------GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       210 -~~-~~------~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                       .. ..      ..++.++|+|+++++++.. ....+|+.++++||.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             00 00      1266999999999999964 235679999999985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=1.8e-25  Score=191.65  Aligned_cols=214  Identities=18%  Similarity=0.118  Sum_probs=158.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+  .++.++.+|++|.++++++++++     +
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~-----~   88 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERAFDSF-----K   88 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHHHhhc-----C
Confidence            3578999999999999999999999999999999999755433222222  46889999999999999988765     7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----C------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----S------  152 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----~------  152 (262)
                      +|+|||+||.... .     +.+++.  +++|+.++..+++++..    .+ .++||++||...+.+.     +      
T Consensus        89 ~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~~  155 (330)
T 2pzm_A           89 PTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATVPIPIDSPTA  155 (330)
T ss_dssp             CSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSSSBCTTCCCC
T ss_pred             CCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccCCCCcCCCCC
Confidence            9999999997532 1     445565  99999999999998874    23 5799999998765433     2      


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh----hcc----cCCCCCHHHHHH
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV----ANL----KGIVLKAKHVAE  224 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~va~  224 (262)
                      ....|+.+|++++.+++.+       ++....++|+.+..|.....  .........    ...    ...++.++|+|+
T Consensus       156 ~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  226 (330)
T 2pzm_A          156 PFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLAIG--PIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLA  226 (330)
T ss_dssp             CCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCCSS--HHHHHHHHHHTTCCCCEESCEECEEEHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCCCC--HHHHHHHHHHcCCEEeCCCCEecceeHHHHHH
Confidence            4578999999999999876       45566666666655542111  111111000    000    245789999999


Q ss_pred             -HHHHHcCCCCCceeceEEeeCCCccc
Q 024839          225 -AALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       225 -~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                       +++++++.+.    |+.+++++|..+
T Consensus       227 ~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          227 IADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             HHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             HHHHHHhhcCC----CCEEEeCCCCCC
Confidence             9999997642    899999998654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.94  E-value=1.5e-26  Score=187.01  Aligned_cols=204  Identities=16%  Similarity=0.161  Sum_probs=161.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||+|+||++++++|+++|++|++++|+.++....      .++.++++|++| ++++.++++       ++|+||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi   68 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQLH-------GMDAII   68 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTTTT-------TCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHHHHc-------CCCEEE
Confidence            699999999999999999999999999999998765332      468999999999 988888776       699999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-------Cccchhhh
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-------PHAYTISK  161 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-------~~~Y~~sK  161 (262)
                      |+||....             +.+++|+.+...+++++.    +.+ .++||++||..+..+.+.       ...|+.+|
T Consensus        69 ~~ag~~~~-------------~~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK  130 (219)
T 3dqp_A           69 NVSGSGGK-------------SLLKVDLYGAVKLMQAAE----KAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAK  130 (219)
T ss_dssp             ECCCCTTS-------------SCCCCCCHHHHHHHHHHH----HTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHH
T ss_pred             ECCcCCCC-------------CcEeEeHHHHHHHHHHHH----HhC-CCEEEEECcccccCCCcccccccccccHHHHHH
Confidence            99997531             167788999888888763    344 579999999888776555       67999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      .+.+.+++      ...|++++.++||++.++...+....        ......+++++|+|+++++++.++.  ..|+.
T Consensus       131 ~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~  194 (219)
T 3dqp_A          131 HFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI--------NDEVSASNTIGDVADTIKELVMTDH--SIGKV  194 (219)
T ss_dssp             HHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE--------SSSCCCCEEHHHHHHHHHHHHTCGG--GTTEE
T ss_pred             HHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc--------CCCcCCcccHHHHHHHHHHHHhCcc--ccCcE
Confidence            99999886      35799999999999998865433221        1244668899999999999997754  45999


Q ss_pred             EeeCCC-cccccCccccccC
Q 024839          242 LVVDGG-FTAVTNVMSMLEG  260 (262)
Q Consensus       242 i~~dgG-~~~~~~~~~~~~~  260 (262)
                      +++++| .++....+.-|++
T Consensus       195 ~~i~~g~~~~~e~~~~~~~~  214 (219)
T 3dqp_A          195 ISMHNGKTAIKEALESLLEH  214 (219)
T ss_dssp             EEEEECSEEHHHHHHTTTTT
T ss_pred             EEeCCCCccHHHHHHHHHHh
Confidence            999666 4454444444443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.94  E-value=1e-25  Score=195.09  Aligned_cols=224  Identities=16%  Similarity=0.093  Sum_probs=167.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCch--hHHHHHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDE--LGNQVVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++|||||+|+||++++++|+++ |++|++++|...  ..+.+ +.+ ...++.++.+|+++++++++++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            5999999999999999999998 799999988652  22222 222 2247889999999999999888752     799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----CCcEEEEecCCCccC------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----IRGSIICTTSTASTV------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----~~~~ii~isS~~~~~------------  149 (262)
                      +|||+||....     +.+.+++.+.+++|+.++..+++++.+.|...+    ..++||++||...+.            
T Consensus        76 ~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           76 AVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            99999997521     234466789999999999999999999875311    025999999965322            


Q ss_pred             ---------CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cch-HhHHHhhhc------
Q 024839          150 ---------GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDV-EGFVCKVAN------  211 (262)
Q Consensus       150 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~-~~~~~~~~~------  211 (262)
                               +......|+.+|++.+.+++.++.++   |++++.++||.+++|......  ... .........      
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence                     12345689999999999999999886   899999999999999753211  100 111111000      


Q ss_pred             -ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 -LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 -~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                       ....++.++|+|+++++++++.   .+|+.+++++|..+
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             ceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence             1134678999999999999654   47999999998754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=6.1e-26  Score=194.82  Aligned_cols=221  Identities=15%  Similarity=0.095  Sum_probs=166.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEE-EecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYR-HCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~-~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+....+.+.+   ...++.++ .+|+++.++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            367899999999999999999999999999999999877665544432   12467788 899999988877765     


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-C--------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-G--------  151 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-~--------  151 (262)
                        ++|+|||+|+.....        +++.+.+++|+.++..+++++.+   ..+ .+++|++||...... .        
T Consensus        83 --~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~---~~~-~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 --GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAA---TPS-VKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHT---CTT-CCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHh---CCC-CcEEEEeccHHHhcCCCCCCCCccc
Confidence              799999999975321        24678999999999999998764   123 579999999876531 1        


Q ss_pred             ----------------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHhHHH
Q 024839          152 ----------------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEGFVC  207 (262)
Q Consensus       152 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~  207 (262)
                                            .....|+.+|.+.+.+++.++.++.. +++++.++||.+.+|.......  ....+..
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~  227 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMM  227 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence                                  12357999999999999999999876 8999999999999987653221  1111111


Q ss_pred             hh---------h-cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          208 KV---------A-NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       208 ~~---------~-~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ..         . .+.+.++.++|+|++++.++...  ..+|+.+..+|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~  275 (342)
T 1y1p_A          228 SLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             HHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             HHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCC
Confidence            10         0 02245789999999999998653  356776666665

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=5.7e-26  Score=185.82  Aligned_cols=198  Identities=15%  Similarity=0.105  Sum_probs=141.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +..|++|||||+++||++++++|+++| ++|++++|+.++..+    +...++.++++|++|+++++++++       ++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   89 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK----PYPTNSQIIMGDVLNHAALKQAMQ-------GQ   89 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS----SCCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc----cccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence            456899999999999999999999999 899999999876543    222478899999999999988877       68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc---------
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH---------  155 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~---------  155 (262)
                      |+||||++..         ..              ...++.+++.|++++ .++||++||.....+.+...         
T Consensus        90 D~vv~~a~~~---------~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~  145 (236)
T 3qvo_A           90 DIVYANLTGE---------DL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIG  145 (236)
T ss_dssp             SEEEEECCST---------TH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC----------------C
T ss_pred             CEEEEcCCCC---------ch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhccc
Confidence            9999999852         11              123557888888776 78999999988765543311         


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .+...+...       ...+.+.|+++++|+||++.++.........     ......+++++++|+|++++++++++..
T Consensus       146 ~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~-----~~~~~~~~~i~~~DvA~~i~~ll~~~~~  213 (236)
T 3qvo_A          146 EPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELTS-----RNEPFKGTIVSRKSVAALITDIIDKPEK  213 (236)
T ss_dssp             GGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEEC-----TTSCCSCSEEEHHHHHHHHHHHHHSTTT
T ss_pred             chHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEec-----cCCCCCCcEECHHHHHHHHHHHHcCccc
Confidence            111122221       2334467999999999999987644321111     1111235678999999999999998876


Q ss_pred             ceeceEEeeCCCcccc
Q 024839          236 YVSGHDLVVDGGFTAV  251 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~  251 (262)
                      ++ |+.+.++++.+..
T Consensus       214 ~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          214 HI-GENIGINQPGTDG  228 (236)
T ss_dssp             TT-TEEEEEECSSCCC
T ss_pred             cc-CeeEEecCCCCCC
Confidence            65 9999999987653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=3.2e-25  Score=191.89  Aligned_cols=228  Identities=16%  Similarity=0.078  Sum_probs=169.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+......+.+. ..++.++.+|+++++++.++++.+     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            468999999999999999999999999999999998765544443332 247889999999999999988765     79


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------------CCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------------GGS  152 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~  152 (262)
                      |+|||+||...     .+.+.+++.+.+++|+.++..+++++.+.   .+ .++||++||...+.            +..
T Consensus        82 d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-VKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-CCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC-CCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            99999998531     12345668899999999999999988753   22 57999999976432            223


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHC------CCCcEEEEEeCCCccCCCCCCCccchHhHHHh----hh------cccCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELG------KHGIRVNCVSPFGVATPFSAGTINDVEGFVCK----VA------NLKGIV  216 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~------~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~----~~------~~~~~~  216 (262)
                      ....|+.+|.+.+.+++.++.++.      +.|++++.++||.+.+|...............    ..      .....+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            456899999999999999999985      45899999999999998643211111111111    00      011346


Q ss_pred             CCHHHHHHHHHHHcCCC--CCceeceEEeeCCC
Q 024839          217 LKAKHVAEAALFLASDE--SAYVSGHDLVVDGG  247 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~--~~~i~G~~i~~dgG  247 (262)
                      +.++|++++++.++...  .....|+.+++.+|
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            78999999999988531  11234778888764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=8.5e-26  Score=185.83  Aligned_cols=216  Identities=10%  Similarity=-0.001  Sum_probs=158.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+|+||++++++|+++  |++|++++|+.++.+.+     ..++.++.+|++++++++++++       +
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~-------~   69 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPAFQ-------G   69 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHHHHHc-------C
Confidence            45789999999999999999999999  89999999987665432     2457789999999999988876       6


Q ss_pred             cCEEEeCCcCCCCCCC--------cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           84 LDIMYSNAGVAGPVGT--------ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                      +|+||||||.......        ..+...+++.+.+++|+.++..+++++.+    .+ .++||++||..+..+.....
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~  144 (253)
T 1xq6_A           70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AG-VKHIVVVGSMGGTNPDHPLN  144 (253)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HT-CSEEEEEEETTTTCTTCGGG
T ss_pred             CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cC-CCEEEEEcCccCCCCCCccc
Confidence            8999999997532110        01223345567889999999888887654    23 57999999988765544444


Q ss_pred             c-----chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          156 A-----YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       156 ~-----Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      .     |+.+|.+++.+++.       +|++++.++||++.++........ ............++++++|+++++++++
T Consensus       145 ~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          145 KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELL-VGKDDELLQTDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEE-EESTTGGGGSSCCEEEHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhh-ccCCcCCcCCCCcEEcHHHHHHHHHHHH
Confidence            4     45589999888753       689999999999999864321100 0000011112345789999999999999


Q ss_pred             CCCCCceeceEEeeCCCc
Q 024839          231 SDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~  248 (262)
                      .++.  .+|+.+++++|.
T Consensus       217 ~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          217 LFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             TCGG--GTTEEEEEEECC
T ss_pred             cCcc--ccCCEEEecCCC
Confidence            7643  479999999863

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=1e-25  Score=193.65  Aligned_cols=225  Identities=18%  Similarity=0.083  Sum_probs=160.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+ ...++.++.+|++|++++.++++.+     ++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QP   76 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CC
Confidence            5789999999999999999999999999999999876532 122222 2246889999999999999988866     79


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-----------CCCCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-----------VGGSG  153 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~~~  153 (262)
                      |+|||+||....     +.+.+++.+.+++|+.++..+++++.+.    +..++||++||...+           .+...
T Consensus        77 d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~  147 (345)
T 2z1m_A           77 DEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV----KPDTKFYQASTSEMFGKVQEIPQTEKTPFYP  147 (345)
T ss_dssp             SEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCceEEEEechhhcCCCCCCCCCccCCCCC
Confidence            999999996421     1234568899999999999999988752    213799999998543           22344


Q ss_pred             CccchhhhHHHHHHHHHHHHHHC---CCCcEEEEEeCCCccCCCCCCCccchHhHHHhh--------hcccCCCCCHHHH
Q 024839          154 PHAYTISKHGLLGLVRSAASELG---KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--------ANLKGIVLKAKHV  222 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v  222 (262)
                      ...|+.+|++.+.+++.++.++.   ..++.++.+.||...+++...............        ......++.++|+
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv  227 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEY  227 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHH
Confidence            56899999999999999999875   234556667777666543210000000000000        0011237899999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +++++++++.+.    ++.+++.+|..
T Consensus       228 a~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          228 VEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             HHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             HHHHHHHHhCCC----CceEEEeCCCC
Confidence            999999997653    35677776654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=4.5e-25  Score=190.12  Aligned_cols=218  Identities=12%  Similarity=0.102  Sum_probs=163.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..+.+...++.++.+|++|+++++++++       .+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            68999999999999999999999  8999999986531 1122233333578899999999998888776       569


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----------------  149 (262)
                      +|||+||....     +.+.+++.+.+++|+.++..+++++.+.    +  .+||++||...+.                
T Consensus        78 ~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           78 AIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             EEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             EEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccccccccC
Confidence            99999996521     1234567889999999999999988764    3  4999999975431                


Q ss_pred             -------CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cch-HhHHHhhh-------cc
Q 024839          150 -------GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDV-EGFVCKVA-------NL  212 (262)
Q Consensus       150 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~-~~~~~~~~-------~~  212 (262)
                             +......|+.+|.+.+.+++.++.++   |++++.++||.+.+|......  ... ........       ..
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  223 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCc
Confidence                   22345689999999999999999886   899999999999998753211  110 11111100       11


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ...++.++|+++++++++.+.   .+|+.+++++|..+
T Consensus       224 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          224 VRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             EEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             eEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            234778999999999999654   36999999998644

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=1e-24  Score=188.36  Aligned_cols=224  Identities=15%  Similarity=0.068  Sum_probs=168.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch----hHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ++++++|||||+|+||++++++|+++|++|++++|+..    .+..+.+.+.   ..++.++.+|+++.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            46789999999999999999999999999999998753    2333333332   1468899999999998888776   


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC------
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS------  152 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------  152 (262)
                          ++|+|||+|+....     ..+.+++.+.+++|+.++..+++++.+    .+ .++||++||...+.+.+      
T Consensus       102 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~~~~E  167 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARD----AK-VQSFTYAASSSTYGDHPGLPKVE  167 (352)
T ss_dssp             ----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----CCCEEEECCcccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHhcCCCCCCCCCC
Confidence                79999999996421     123467889999999999999998764    23 57999999987654332      


Q ss_pred             -----CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhh--hcc---------c
Q 024839          153 -----GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKV--ANL---------K  213 (262)
Q Consensus       153 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~--~~~---------~  213 (262)
                           ....|+.+|.+.+.+++.++.++   |++++.++||.+.+|......   .....+....  ..+         .
T Consensus       168 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  244 (352)
T 1sb8_A          168 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS  244 (352)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCce
Confidence                 35689999999999999999885   899999999999998754321   1111111110  011         1


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ..++.++|+++++++++... ....|+.+++++|..+
T Consensus       245 ~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          245 RDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             ECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            24778999999999988652 2356899999988644

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=2.3e-24  Score=171.97  Aligned_cols=198  Identities=18%  Similarity=0.141  Sum_probs=149.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|+++||||+|+||++++++|+++|++|++++|+.+....    ....++.++.+|+++++++.++++       .+|+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   71 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----EGPRPAHVVVGDVLQAADVDKTVA-------GQDAV   71 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----SSCCCSEEEESCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc----ccCCceEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            4789999999999999999999999999999998765432    113568899999999998888776       68999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC----CCccchhhhHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS----GPHAYTISKHG  163 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----~~~~Y~~sK~a  163 (262)
                      ||+++....    .+.        .++|+.+...+++++.+    .+ .+++|++||.......+    ....|+.+|.+
T Consensus        72 i~~a~~~~~----~~~--------~~~n~~~~~~~~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~  134 (206)
T 1hdo_A           72 IVLLGTRND----LSP--------TTVMSEGARNIVAAMKA----HG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (206)
T ss_dssp             EECCCCTTC----CSC--------CCHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             EECccCCCC----CCc--------cchHHHHHHHHHHHHHH----hC-CCeEEEEeeeeeccCcccccccchhHHHHHHH
Confidence            999997532    111        13677777777776543    33 57999999987655443    45789999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCc-cCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGV-ATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      ++.+++.       .|++++.++||.+ .++.........    .  ..+.+.+++++|+++++.+++.++.  .+|+.+
T Consensus       135 ~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~----~--~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~  199 (206)
T 1hdo_A          135 MHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVTL----D--GRGPSRVISKHDLGHFMLRCLTTDE--YDGHST  199 (206)
T ss_dssp             HHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEES----S--SCSSCSEEEHHHHHHHHHHTTSCST--TTTCEE
T ss_pred             HHHHHHh-------CCCCEEEEeCCcccCCCCCcceEecc----c--CCCCCCccCHHHHHHHHHHHhcCcc--ccccce
Confidence            9998842       5899999999998 344322211111    0  1121568899999999999997753  689999


Q ss_pred             eeCCCc
Q 024839          243 VVDGGF  248 (262)
Q Consensus       243 ~~dgG~  248 (262)
                      +++||+
T Consensus       200 ~i~~g~  205 (206)
T 1hdo_A          200 YPSHQY  205 (206)
T ss_dssp             EEECCC
T ss_pred             eeeccc
Confidence            999986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.93  E-value=1.9e-24  Score=185.62  Aligned_cols=210  Identities=15%  Similarity=0.132  Sum_probs=154.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+.+.    ..++.++.+|++|.+++.++++       ++|+||
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   82 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLERALR-------GLDGVI   82 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            47999999999999999999999999999999876543321    1357889999999998887775       699999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC---------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG---------------  153 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~---------------  153 (262)
                      |+|+...       ...+++.+.+++|+.++..+++++.+.    + .+++|++||...+.+.+.               
T Consensus        83 h~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~  150 (342)
T 2x4g_A           83 FSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPS  150 (342)
T ss_dssp             EC-------------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCT
T ss_pred             ECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCCCCCcccc
Confidence            9999642       234578889999999999999988763    3 579999999877654333               


Q ss_pred             -CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCC-CCCccchHhHHHhhhc-----ccCCCCCHHHHHHHH
Q 024839          154 -PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS-AGTINDVEGFVCKVAN-----LKGIVLKAKHVAEAA  226 (262)
Q Consensus       154 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~  226 (262)
                       ...|+.+|.+.+.+++.++.   . |++++.++||.+.+|.. ................     ....++.++|+++++
T Consensus       151 ~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          151 GKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             ccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence             67899999999999999876   3 89999999999999865 2111111111111000     112267999999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCc
Q 024839          227 LFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ++++..+..   |+.+++++|.
T Consensus       227 ~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          227 LMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHhCCCC---CceEEEcCCc
Confidence            999976542   8999999986

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=8.8e-25  Score=188.23  Aligned_cols=225  Identities=12%  Similarity=0.032  Sum_probs=160.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCch--hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++++|||||+|+||++++++|+++|  ++|+..+|...  ....+.......++.++.+|++|++++.++++..  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER--   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc--
Confidence            34678999999999999999999999999  67777776642  2222222222357899999999999999988853  


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--------
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--------  151 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------  151 (262)
                         ++|+|||+|+....     ....+++.+.+++|+.++..+++++.+    .+ .+++|++||...+...        
T Consensus        98 ---~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vy~~~~~~~~~~E  164 (346)
T 4egb_A           98 ---DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKK----YP-HIKLVQVSTDEVYGSLGKTGRFTE  164 (346)
T ss_dssp             ---TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHH----ST-TSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred             ---CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeCchHHhCCCCcCCCcCC
Confidence               69999999997532     234567788999999999999887754    34 5789999997654332        


Q ss_pred             ----CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh--hc---------ccCCC
Q 024839          152 ----SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--AN---------LKGIV  216 (262)
Q Consensus       152 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--~~---------~~~~~  216 (262)
                          .....|+.+|.+.+.+++.++.++   |++++.++|+.+.+|...... .........  ..         ....+
T Consensus       165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
T 4egb_A          165 ETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEK-LIPLMVTNALEGKKLPLYGDGLNVRDW  240 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS-HHHHHHHHHHTTCCCEEETTSCCEECE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccc-hHHHHHHHHHcCCCceeeCCCCeEEee
Confidence                124689999999999999999885   899999999999998653221 111111110  00         11235


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++|+|+++++++....   .|+.+++.+|..+
T Consensus       241 i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          241 LHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             EEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             EEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            679999999999997654   6899999998754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=2.1e-24  Score=187.19  Aligned_cols=220  Identities=17%  Similarity=0.110  Sum_probs=158.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHH--cCCeEEEeeCCchhHH---------HHHhhhCCCceEEEEecCCCHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAE--HGAFVIIADIQDELGN---------QVVSSIGPEKASYRHCDVRDEKQVE   71 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~--~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~~~~~D~~~~~~i~   71 (262)
                      ++++++|+||||||+|+||++++++|++  +|++|++++|..+...         .....+...++.++.+|++++++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            3467899999999999999999999999  8999999998754111         0011122346789999999999888


Q ss_pred             HHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC
Q 024839           72 ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG  151 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~  151 (262)
                      ++      ...++|+|||+||...       .+.+++.+.+++|+.++..+++++..    .  ..+||++||...+...
T Consensus        85 ~~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~vyg~~  145 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGVYGNT  145 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGGCSC
T ss_pred             Hh------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHHhCCC
Confidence            76      2348999999999642       24456789999999999999998743    2  3459999995543322


Q ss_pred             ----------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhh---h-----
Q 024839          152 ----------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKV---A-----  210 (262)
Q Consensus       152 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~---~-----  210 (262)
                                .+...|+.+|.+.+.+++.++.+     +.+..++|+.+.+|......   ..........   .     
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLF  220 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECS
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEE
Confidence                      22346999999999999887665     78889999999887543211   0011111110   0     


Q ss_pred             ---cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 ---NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ---~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                         .....++.++|+|+++++++..+.   +| .+++++|..+
T Consensus       221 ~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          221 EFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             CCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence               011236679999999999998653   58 9999888654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.92  E-value=5.6e-24  Score=182.51  Aligned_cols=212  Identities=17%  Similarity=0.118  Sum_probs=155.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+  .++.++.+|++|+++++++++.     +++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~-----~~~   90 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHALVNQLIGD-----LQP   90 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC--TTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc--CCceEEEEeCCCHHHHHHHHhc-----cCC
Confidence            457899999999999999999999999999999999754322211111  4688999999999999888875     279


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----CC--------C
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----GG--------S  152 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----~~--------~  152 (262)
                      |+|||+||.... .     +.+++.  +++|+.++..+++++.+    .+ .++||++||...+.    ..        .
T Consensus        91 D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~  157 (333)
T 2q1w_A           91 DAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKK----NN-VGRFVYFQTALCYGVKPIQQPVRLDHPRN  157 (333)
T ss_dssp             SEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGCSCCCSSSBCTTSCCC
T ss_pred             cEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCcccCCCCcCCCCC
Confidence            999999997532 1     334454  99999999999998865    23 57999999976653    21        2


Q ss_pred             CC-ccchhhhHHHHHHHHH-HHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh--------hcccCCCCCHHHH
Q 024839          153 GP-HAYTISKHGLLGLVRS-AASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--------ANLKGIVLKAKHV  222 (262)
Q Consensus       153 ~~-~~Y~~sK~a~~~~~~~-la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v  222 (262)
                      .. ..|+.+|.+.+.+++. ++        .+..++|+.+.+|.....  .........        ..+...++.++|+
T Consensus       158 p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  227 (333)
T 2q1w_A          158 PANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSG--PLPIFFQRLSEGKKCFVTKARRDFVFVKDL  227 (333)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSS--HHHHHHHHHHTTCCCEEEECEECEEEHHHH
T ss_pred             CCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCc--HHHHHHHHHHcCCeeeCCCceEeeEEHHHH
Confidence            33 7899999999999987 54        677899998888762111  111111100        1223557899999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++++++..+.    |+.+++++|..+
T Consensus       228 a~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          228 ARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            999999997654    899999998654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.92  E-value=9.7e-25  Score=185.37  Aligned_cols=214  Identities=15%  Similarity=0.099  Sum_probs=158.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|+++|++|++++|..+....   .+. .++.++.+|++++++++++++..     ++|+|||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~   72 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NVP-KGVPFFRVDLRDKEGVERAFREF-----RPTHVSH   72 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GSC-TTCCEECCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hcc-cCeEEEECCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999999999999885432211   121 35678899999999998887642     7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------------CCCCcc
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------------GSGPHA  156 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~~~~~~  156 (262)
                      +|+....     ..+.+++.+.+++|+.++..+++++..    .+ .++||++||..+.++             ......
T Consensus        73 ~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~  142 (311)
T 2p5y_A           73 QAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSP  142 (311)
T ss_dssp             CCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSH
T ss_pred             CccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCCh
Confidence            9986421     134566889999999999999987753    33 579999999722211             123568


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-c-hHhHH----Hhhh------------cccCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-D-VEGFV----CKVA------------NLKGIVLK  218 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~-~~~~~----~~~~------------~~~~~~~~  218 (262)
                      |+.+|++.+.+++.++.++   |++++.++|+.+++|....... . .....    ....            ...+.++.
T Consensus       143 Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  219 (311)
T 2p5y_A          143 YAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVY  219 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEE
Confidence            9999999999999999885   8999999999999986543211 0 11111    1100            01134678


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+++++++++..+     |+.+++++|..+
T Consensus       220 v~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          220 VGDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             HHHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            999999999998653     789999988654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=4.1e-24  Score=183.48  Aligned_cols=222  Identities=15%  Similarity=0.120  Sum_probs=156.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh--hhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS--SIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++|++|||||+|+||++++++|+++|++|+++.|+.+...+...  .+..  .++.++.+|++|+++++++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            368999999999999999999999999999988888664332221  1221  257889999999988887775      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC---------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS---------  152 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~---------  152 (262)
                       .+|+|||+|+.. .   ..  ..+...+.+++|+.++..+++++.+..   . .++||++||..+..+.+         
T Consensus        77 -~~d~Vih~A~~~-~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 -GCTGVFHVATPM-D---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---T-VRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             -TCSEEEECCCCC-C---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---C-CCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             -CCCEEEEecccc-C---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---C-ccEEEEeeeHhhcccCCCCCcccCcc
Confidence             689999999853 1   11  122345789999999999999887642   2 47999999987544211         


Q ss_pred             -------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH----Hh----h-h
Q 024839          153 -------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV----CK----V-A  210 (262)
Q Consensus       153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~----~~----~-~  210 (262)
                                   ....|+.||.+.+.+++.++.+   +|++++.++|+.+++|.............    ..    . .
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI  222 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHH
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccc
Confidence                         1236999999999999887765   48999999999999997543221110000    00    0 0


Q ss_pred             cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          211 NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       211 ~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      .+..+++.++|+++++++++...  ...|.++..+++.+
T Consensus       223 ~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~~s  259 (337)
T 2c29_D          223 IRQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSHDCI  259 (337)
T ss_dssp             HTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCEEEE
T ss_pred             cCCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCCCCC
Confidence            01234889999999999999653  34566555454444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=1.3e-24  Score=176.28  Aligned_cols=209  Identities=12%  Similarity=-0.042  Sum_probs=155.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|||||+|+||++++++|+++|++|++++|+.++....    . .++.++.+|++|++++.++++       ++|+||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   72 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----N-EHLKVKKADVSSLDEVCEVCK-------GADAVI   72 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----C-TTEEEECCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----c-CceEEEEecCCCHHHHHHHhc-------CCCEEE
Confidence            6899999999999999999999999999999997765322    1 578899999999999988876       689999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------CCCccch
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------SGPHAYT  158 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------~~~~~Y~  158 (262)
                      |+||....           ..+.+++|+.+...+++++.+    .+ .+++|++||.....+.          .....|+
T Consensus        73 ~~a~~~~~-----------~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~  136 (227)
T 3dhn_A           73 SAFNPGWN-----------NPDIYDETIKVYLTIIDGVKK----AG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILP  136 (227)
T ss_dssp             ECCCC-----------------CCSHHHHHHHHHHHHHHH----TT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHH
T ss_pred             EeCcCCCC-----------ChhHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCChhhccCCCCCccccCCcchHHHHH
Confidence            99986411           112678899998888876643    34 5699999998765433          2357899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      .+|.+.+.+.+.++.+   .|++++.++||.+.+|......................+++++|+|++++.++..+.  ..
T Consensus       137 ~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~--~~  211 (227)
T 3dhn_A          137 GVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK--HH  211 (227)
T ss_dssp             HHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC--CC
T ss_pred             HHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc--cc
Confidence            9999999998887763   599999999999988754322111000000000011346799999999999997664  56


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      |+.+++.+....
T Consensus       212 g~~~~~~~~~~~  223 (227)
T 3dhn_A          212 QERFTIGYLEHH  223 (227)
T ss_dssp             SEEEEEECCSCC
T ss_pred             CcEEEEEeehhc
Confidence            999998876543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=4.3e-24  Score=186.27  Aligned_cols=220  Identities=13%  Similarity=0.075  Sum_probs=161.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.+...+...  ...++.++.+|++++++++++++       +
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--~~~~v~~~~~Dl~d~~~l~~~~~-------~   99 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--DHPAVRFSETSITDDALLASLQD-------E   99 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--CCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--CCCceEEEECCCCCHHHHHHHhh-------C
Confidence            4678999999999999999999999999 999999998654321111  13578899999999988877665       7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-CCCcEEEEecCCCccC-------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-KIRGSIICTTSTASTV-------------  149 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~~~~ii~isS~~~~~-------------  149 (262)
                      +|+|||+|+....     ..+.+++.+.+++|+.++..+++++.    +. + .+++|++||...+.             
T Consensus       100 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~  169 (377)
T 2q1s_A          100 YDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLK----HFKR-LKKVVYSAAGCSIAEKTFDDAKATEET  169 (377)
T ss_dssp             CSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSS-CCEEEEEEEC--------------CCC
T ss_pred             CCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CCeEEEeCCHHHcCCCCCCCcCccccc
Confidence            9999999996421     12345678899999999999888763    23 3 56999999975321             


Q ss_pred             ---CC-CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCC---------CCC---ccchHhHHHhh--hc
Q 024839          150 ---GG-SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFS---------AGT---INDVEGFVCKV--AN  211 (262)
Q Consensus       150 ---~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~---------~~~---~~~~~~~~~~~--~~  211 (262)
                         +. .....|+.+|.+.+.+++.++.++   |++++.++||.+.+|..         ...   ...........  ..
T Consensus       170 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  246 (377)
T 2q1s_A          170 DIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGM  246 (377)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTC
T ss_pred             ccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCC
Confidence               21 345689999999999999998875   89999999999999865         210   01111111110  11


Q ss_pred             ---------ccCCCCCHHHHHHH-HHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 ---------LKGIVLKAKHVAEA-ALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 ---------~~~~~~~~~~va~~-~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                               ....++.++|+|++ +++++..+.   +| .+++.+|..+
T Consensus       247 ~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          247 PLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             CCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             CeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence                     11235679999999 999997643   68 9999988543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.92  E-value=5.2e-24  Score=183.75  Aligned_cols=224  Identities=15%  Similarity=0.080  Sum_probs=166.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-------CceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-------EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +++|++|||||+|+||++++++|+++|++|++++|.........+.+..       .++.++.+|+.|++++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            4689999999999999999999999999999999975433322222211       478999999999998888776   


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC------
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS------  152 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------  152 (262)
                          ++|+|||+|+....     ..+.+++.+.+++|+.++..+++++..    .+ .+++|++||...+...+      
T Consensus       100 ----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E  165 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKN----AQ-VQSFTYAASSSTYGDHPALPKVE  165 (351)
T ss_dssp             ----TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEecHHhcCCCCCCCCcc
Confidence                79999999996421     234456788999999999999887754    33 56999999986653322      


Q ss_pred             -----CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHH----hhh-------ccc
Q 024839          153 -----GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVC----KVA-------NLK  213 (262)
Q Consensus       153 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~----~~~-------~~~  213 (262)
                           ....|+.+|.+.+.+++.++.++   |++++.++|+.+.+|......   .....+..    ...       ...
T Consensus       166 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  242 (351)
T 3ruf_A          166 ENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETS  242 (351)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeE
Confidence                 24689999999999999999885   899999999999998654321   01111111    100       011


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ..++.++|++++++.++... ....|+.+++.+|..+
T Consensus       243 ~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          243 RDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             ECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            24678999999999998653 2456899999988644

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=1.3e-24  Score=184.41  Aligned_cols=216  Identities=16%  Similarity=0.103  Sum_probs=160.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|||||+|+||++++++|+++|++|++++|+.+......    ...+.++.+|+.+.+ +.++++       . |+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WGAGIK-------G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TTTTCC-------C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HHhhcC-------C-CEEE
Confidence            47999999999999999999999999999998866543221    356889999999987 655443       3 9999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  157 (262)
                      |+|+....     ..+.+++...+++|+.++..+++++..    .+ .++||++||...+..           ......|
T Consensus        68 h~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y  137 (312)
T 3ko8_A           68 HFAANPEV-----RLSTTEPIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVY  137 (312)
T ss_dssp             ECCSSCSS-----SGGGSCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             ECCCCCCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChH
Confidence            99996421     345566889999999999999998753    23 579999999765432           2345789


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-ch-HhHHHhhh--------cccCCCCCHHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DV-EGFVCKVA--------NLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~-~~~~~~~~--------~~~~~~~~~~~va~~~~  227 (262)
                      +.+|.+.+.+++.++.++   |++++.++||.+.+|....... .. ........        .....++.++|++++++
T Consensus       138 ~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  214 (312)
T 3ko8_A          138 GAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATL  214 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHH
Confidence            999999999999999986   8999999999999987543211 10 11111000        01134667999999999


Q ss_pred             HHcCC-CCCceeceEEeeCCCccc
Q 024839          228 FLASD-ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       228 ~l~~~-~~~~i~G~~i~~dgG~~~  250 (262)
                      +++.. ......|+.+++.+|..+
T Consensus       215 ~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          215 AAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHhccccCCCCcEEEEcCCCce
Confidence            99975 112346899999988654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.91  E-value=8.5e-24  Score=179.68  Aligned_cols=213  Identities=13%  Similarity=0.110  Sum_probs=156.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||+|+||++++++|+++|+.|++..++....+..     ...+.++.+|+++ +++.++++       ++|+||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vi   68 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDYLK-------GAEEVW   68 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHHHT-------TCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHHhc-------CCCEEE
Confidence            4799999999999999999999995555555544332211     2468899999999 88877776       799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------CCCCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------GGSGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~~~~~Y  157 (262)
                      |+|+....     ..+.+++.+.+++|+.++..+++++..    .+ .+++|++||...+.           +......|
T Consensus        69 h~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  138 (313)
T 3ehe_A           69 HIAANPDV-----RIGAENPDEIYRNNVLATYRLLEAMRK----AG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLY  138 (313)
T ss_dssp             ECCCCCCC-----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             ECCCCCCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHH
Confidence            99985421     345567889999999999999887543    34 57999999976542           23345689


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-c-hHhHHHh-h-------hcccCCCCCHHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-D-VEGFVCK-V-------ANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~-~~~~~~~-~-------~~~~~~~~~~~~va~~~~  227 (262)
                      +.+|.+.+.+++.++.++   |++++.++|+.+.+|......- . ....... .       ......++.++|++++++
T Consensus       139 ~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  215 (313)
T 3ehe_A          139 GASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAML  215 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHH
Confidence            999999999999999885   8999999999999986443210 0 0111111 0       011234778999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCccc
Q 024839          228 FLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++.+.   ..|+.+++.+|..+
T Consensus       216 ~~~~~~---~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          216 FGLRGD---ERVNIFNIGSEDQI  235 (313)
T ss_dssp             HHTTCC---SSEEEEECCCSCCE
T ss_pred             HHhccC---CCCceEEECCCCCe
Confidence            999733   35899999988644

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=8.9e-24  Score=184.43  Aligned_cols=218  Identities=14%  Similarity=0.092  Sum_probs=162.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+.....    ...++.++.+|+++.+++.++++       ++|
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   95 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----DMFCDEFHLVDLRVMENCLKVTE-------GVD   95 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----GGTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----ccCCceEEECCCCCHHHHHHHhC-------CCC
Confidence            3568999999999999999999999999999999986543221    11367889999999999888775       799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----------------  149 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----------------  149 (262)
                      +|||+|+.... ..   ...+++.+.+++|+.++..+++++..    .+ .++||++||...+.                
T Consensus        96 ~Vih~A~~~~~-~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~  166 (379)
T 2c5a_A           96 HVFNLAADMGG-MG---FIQSNHSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIYPEFKQLETTNVSLKESD  166 (379)
T ss_dssp             EEEECCCCCCC-HH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             EEEECceecCc-cc---ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeehheeCCCCCCCccCCCcCccc
Confidence            99999996521 11   11345788999999999999998753    33 57999999976543                


Q ss_pred             --CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---chHhHHHhh----h--------cc
Q 024839          150 --GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DVEGFVCKV----A--------NL  212 (262)
Q Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~----~--------~~  212 (262)
                        +......|+.+|.+.+.+++.++.++   |++++.++||.+.+|.......   ....+....    .        ..
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (379)
T 2c5a_A          167 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  243 (379)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe
Confidence              22335689999999999999998875   8999999999999986432110   111111110    0        01


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ...++.++|+++++++++..+    .|+.+++.+|..+
T Consensus       244 ~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          244 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             eEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            234678999999999999754    4778999888644

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=6.3e-24  Score=188.20  Aligned_cols=217  Identities=12%  Similarity=0.031  Sum_probs=157.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh---HHHHHhhh-----------CCCceEEEEecCCCHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSI-----------GPEKASYRHCDVRDEKQV   70 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~-----------~~~~~~~~~~D~~~~~~i   70 (262)
                      ...+|+||||||+|+||++++++|+++|++|+++.|+.+.   .+.+.+.+           ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            3567899999999999999999999999999999998762   22222211           125789999999998887


Q ss_pred             HHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc---
Q 024839           71 EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS---  147 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~---  147 (262)
                      .        ..+++|+|||||+...        ..+++.+.+++|+.++..+++++.+     + ..++|++||...   
T Consensus       146 ~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~-~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTY  203 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH-----T-TCEEEEEEEGGGGSE
T ss_pred             C--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh-----c-CCcEEEECchHhCCC
Confidence            7        4468999999999752        2356788999999999999998865     2 579999999876   


Q ss_pred             ---------------cCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHhHH
Q 024839          148 ---------------TVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGFV  206 (262)
Q Consensus       148 ---------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~~  206 (262)
                                     ..+......|+.+|.+.+.+++.++.    .|++++.++||.+.++........      .....
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~  279 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM  279 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence                           00122567899999999999998754    589999999999999875543110      11111


Q ss_pred             Hhhh----------cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          207 CKVA----------NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       207 ~~~~----------~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ....          .....++.++|+|+++++++..+.   .|+++++++|..+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          280 NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            1110          112347789999999999997654   7999999998654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=1e-23  Score=180.93  Aligned_cols=216  Identities=15%  Similarity=0.151  Sum_probs=160.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CeEEEeeCCch--hHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEH---G---AFVIIADIQDE--LGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~---g---~~V~~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++|||||+|+||++++++|+++   |   ++|++++|...  ..+.+ +.+. ..++.++.+|+++++++++++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            6999999999999999999997   8   99999988642  11111 2222 246889999999998888776      


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------  149 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------  149 (262)
                       .++|+|||+|+....     +.+.+++.+.+++|+.++..+++++.+.    + .++||++||...+.           
T Consensus        75 -~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             -TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEecchHHhCCCCCCCCCCCC
Confidence             379999999996421     1234567789999999999999988763    3 57999999975432           


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHH----hhhc-------ccCCCCC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVC----KVAN-------LKGIVLK  218 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~----~~~~-------~~~~~~~  218 (262)
                      +......|+.+|.+.+.+++.++.++   |++++.++||.+.+|...... .......    ....       ....++.
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  219 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK-LIPLFVTNLLDGGTLPLYGDGANVREWVH  219 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS-HHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCC-hHHHHHHHHhcCCCcEEeCCCCeeEeeEe
Confidence            22345689999999999999999885   899999999999998753211 1111111    1000       1124678


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+++++.+++.+.   .+|+.+++++|..+
T Consensus       220 v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          220 TDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             HHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            999999999999654   36899999998644

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=3.7e-24  Score=184.42  Aligned_cols=212  Identities=12%  Similarity=0.076  Sum_probs=157.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +.++|+||||||+|+||++++++|+++|++|++++|+.+.          .++.++.+|+.+.+++.++++       ++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSDAIM-------GV   78 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHHHHT-------TC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHHHHh-------CC
Confidence            4678999999999999999999999999999999998764          357789999999999888776       79


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------------C
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------------G  151 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~  151 (262)
                      |+|||+|+...       .+.+++.+.+++|+.++..+++++..    .+ .++||++||...+..             .
T Consensus        79 d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~  146 (347)
T 4id9_A           79 SAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRPEFLPVTEDHPL  146 (347)
T ss_dssp             SEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCC
T ss_pred             CEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCCCCCCcCCCCCC
Confidence            99999999752       34455689999999999999887653    34 579999999654322             2


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc-------------CCCCCCC----------ccchHhHHHh
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA-------------TPFSAGT----------INDVEGFVCK  208 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~-------------t~~~~~~----------~~~~~~~~~~  208 (262)
                      .....|+.+|.+.+.+++.++.+   .|++++.++|+.+.             +|.....          ..........
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 4id9_A          147 CPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQS  223 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHH
Confidence            34568999999999999999888   48999999999998             3321100          0000011111


Q ss_pred             hh--c---------ccCCC----CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          209 VA--N---------LKGIV----LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       209 ~~--~---------~~~~~----~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ..  .         ....+    +.++|+|++++.++..+.  ..|+.+++.+|..+
T Consensus       224 ~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          224 RDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             HCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             HHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence            00  0         11234    789999999999997653  34899999988644

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=5.9e-23  Score=180.30  Aligned_cols=225  Identities=12%  Similarity=0.023  Sum_probs=160.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-----------------HHHh--hhCCCceEEEEecCCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-----------------QVVS--SIGPEKASYRHCDVRD   66 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-----------------~~~~--~~~~~~~~~~~~D~~~   66 (262)
                      .+++++|||||+|.||++++++|+++|++|++++|......                 .+.+  .....++.++.+|+++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            35789999999999999999999999999999988643211                 1111  1112468899999999


Q ss_pred             HHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           67 EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        67 ~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                      +++++++++..     ++|+|||+||....  .....+++++...+++|+.++..+++++.+.    +...+||++||..
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~  157 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence            99999888765     69999999997521  1122356778889999999999999987653    2125999999975


Q ss_pred             ccC------------------------CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC----
Q 024839          147 STV------------------------GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT----  198 (262)
Q Consensus       147 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~----  198 (262)
                      .+.                        +......|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....    
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            432                        22335689999999999999998886   89999999999999864210    


Q ss_pred             ------------ccchHhHHHh----hhc-------ccCCCCCHHHHHHHHHHHcCCCCCceec--eEEeeCC
Q 024839          199 ------------INDVEGFVCK----VAN-------LKGIVLKAKHVAEAALFLASDESAYVSG--HDLVVDG  246 (262)
Q Consensus       199 ------------~~~~~~~~~~----~~~-------~~~~~~~~~~va~~~~~l~~~~~~~i~G--~~i~~dg  246 (262)
                                  ......+...    ...       ....++.++|+|++++.++....  ..|  +.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                        0011111111    000       11235789999999999986543  236  6788865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.91  E-value=8.6e-24  Score=180.11  Aligned_cols=214  Identities=15%  Similarity=0.112  Sum_probs=147.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC-Cchh---HHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDEL---GNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r-~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   ...+ ..+..  .++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            589999999999999999999999999998888 5432   1111 12211  257788999999999888776      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHH-HHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC-------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQ-FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG-------  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-------  153 (262)
                       .+|+|||+|+..       ....++ +.+.+++|+.++..+++++.+.   .+ .++||++||..+..+.+.       
T Consensus        74 -~~d~vih~A~~~-------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~-~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPI-------DFAVSEPEEIVTKRTVDGALGILKACVNS---KT-VKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTC---SS-CCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCcc-------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CC-ccEEEEeccHHHcccCCCCCeecCC
Confidence             689999999632       112222 4568999999999999987643   12 579999999875432210       


Q ss_pred             --------------C-ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH----HHhhh--cc
Q 024839          154 --------------P-HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF----VCKVA--NL  212 (262)
Q Consensus       154 --------------~-~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~----~~~~~--~~  212 (262)
                                    . .+|+.||.+.+.+++.++.+   +|++++.++||.+++|............    .....  .+
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~  218 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIG  218 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCC
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCc
Confidence                          1 16999999888888776654   5899999999999999754322111111    11000  01


Q ss_pred             cC--CCCCHHHHHHHHHHHcCCCCCceeceEEeeCC
Q 024839          213 KG--IVLKAKHVAEAALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       213 ~~--~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ..  .++.++|+|+++++++..+.  .+|+ +++++
T Consensus       219 ~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          219 VTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             EEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             CCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            01  37899999999999996532  5687 44544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.91  E-value=2.4e-23  Score=179.30  Aligned_cols=225  Identities=13%  Similarity=0.126  Sum_probs=159.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh----------HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----------GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      +|++|||||+|+||++++++|+++|++|++++|....          .+.+.+ ....++.++.+|++++++++++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE-LTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHH-HHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHh-ccCCceEEEECCCCCHHHHHHHHHhc
Confidence            4789999999999999999999999999999875432          222211 11246889999999999998887752


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------  150 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------  150 (262)
                           ++|+|||+||....     ..+.+++.+.+++|+.++..+++++.    +.+ .++||++||...+..       
T Consensus        81 -----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~  145 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMK----AHG-VKNLVFSSSATVYGNPQYLPLD  145 (348)
T ss_dssp             -----CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCSCSSSSBC
T ss_pred             -----CCCEEEECCCCcCc-----cchhhchHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEECcHHHhCCCCCCCcC
Confidence                 79999999996521     11345678899999999999988653    334 579999999765431       


Q ss_pred             ----C-CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC---C-----ccchHhHHHh-h---h---
Q 024839          151 ----G-SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG---T-----INDVEGFVCK-V---A---  210 (262)
Q Consensus       151 ----~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~---~-----~~~~~~~~~~-~---~---  210 (262)
                          . +....|+.+|.+.+.+++.++.+  ..++++..++|+.+.+|....   .     .......... .   .   
T Consensus       146 E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1ek6_A          146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREAL  223 (348)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCE
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCe
Confidence                1 22578999999999999999888  346999999999998873210   0     0111111110 0   0   


Q ss_pred             ------------cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 ------------NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ------------~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                                  .....++.++|++++++.++........++.+++.+|..+
T Consensus       224 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence                        0112467899999999998864321222489999877543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.91  E-value=2.1e-23  Score=182.06  Aligned_cols=225  Identities=13%  Similarity=0.033  Sum_probs=162.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhhC--CC-ceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSIG--PE-KASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~--~~-~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+...  .. ++.++.+|+++.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999988654     222111110  12 6889999999999999988865   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----------C
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----------G  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----------~  150 (262)
                        ++|+|||+||....     ..+.+++...+++|+.++..+++++.+...+++..++||++||...+.          +
T Consensus       106 --~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              79999999996521     123567889999999999999999998875533257999999976543          2


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cc-hHhHH----Hhh-h-------cccCCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-ND-VEGFV----CKV-A-------NLKGIV  216 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~-~~~~~----~~~-~-------~~~~~~  216 (262)
                      ......|+.+|.+.+.+++.++.++   ++.+..+.|..+..|...... .. .....    ... .       .....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            2345789999999999999999885   666666777666665432211 00 01111    010 0       111347


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++|+++++++++..+.    ++.+++.+|..+
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            789999999999997653    478888888543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.91  E-value=1.6e-23  Score=178.08  Aligned_cols=208  Identities=16%  Similarity=0.075  Sum_probs=127.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.        .  +  ++.+|++++++++++++..     ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~v   64 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------P--K--FEQVNLLDSNAVHHIIHDF-----QPHVI   64 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHH-----CCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------C--C--eEEecCCCHHHHHHHHHhh-----CCCEE
Confidence            5789999999999999999999999999999987543        1  1  6889999999998888754     79999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------CCCCccc
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------GSGPHAY  157 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------~~~~~~Y  157 (262)
                      ||+||....     ..+.+++.+.+++|+.++..+++++.+.      .+++|++||...+.+          ......|
T Consensus        65 ih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           65 VHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             EECC------------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             EECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            999997532     2345678899999999999999988752      349999999876543          2345689


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC---CCccchHhHHH--hh-----hcccCCCCCHHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA---GTINDVEGFVC--KV-----ANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~---~~~~~~~~~~~--~~-----~~~~~~~~~~~~va~~~~  227 (262)
                      +.+|.+.+.+++.++       ..+..++|+.+.++...   ...........  ..     ..+...++.++|++++++
T Consensus       134 ~~sK~~~e~~~~~~~-------~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  206 (315)
T 2ydy_A          134 GKTKLDGEKAVLENN-------LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCR  206 (315)
T ss_dssp             HHHHHHHHHHHHHHC-------TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC-------CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHH
Confidence            999999999998874       23456777777665432   12111111111  00     012345789999999999


Q ss_pred             HHcCCC-CCceeceEEeeCCCccc
Q 024839          228 FLASDE-SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       228 ~l~~~~-~~~i~G~~i~~dgG~~~  250 (262)
                      +++.+. .....|+.+++++|..+
T Consensus       207 ~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          207 QLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHhhccccCCCCeEEEcCCCcc
Confidence            998653 12246889999998654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.91  E-value=3.9e-24  Score=185.12  Aligned_cols=220  Identities=15%  Similarity=0.155  Sum_probs=157.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++|++|||||+|+||++++++|+++| ++|++++|..+...  .+.+.  .+. +.+|+++.++++++++.  ..++
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~-~~~d~~~~~~~~~~~~~--~~~~  114 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN-IADYMDKEDFLIQIMAG--EEFG  114 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--TSC-CSEEEEHHHHHHHHHTT--CCCS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--Cce-EeeecCcHHHHHHHHhh--cccC
Confidence            34668899999999999999999999999 99999998765421  11222  222 67899999888877653  1245


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS----------  152 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------  152 (262)
                      ++|+|||+|+....       +.+++.+.+++|+.++..+++++.+.    + . ++|++||...+.+..          
T Consensus       115 ~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~-r~V~~SS~~v~g~~~~~~~~E~~~~  181 (357)
T 2x6t_A          115 DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYE  181 (357)
T ss_dssp             SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred             CCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence            79999999997532       23357889999999999999988762    3 4 999999987543322          


Q ss_pred             -CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHH----hh-------hcc-cCCC
Q 024839          153 -GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVC----KV-------ANL-KGIV  216 (262)
Q Consensus       153 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~----~~-------~~~-~~~~  216 (262)
                       ....|+.+|.+.+.+++.++.+   .|++++.++||.+.+|......   ........    ..       ... ...+
T Consensus       182 ~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (357)
T 2x6t_A          182 KPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF  258 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEcc
Confidence             2568999999999999998866   4899999999999988643210   11111110    00       011 3356


Q ss_pred             CCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          217 LKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++|+|+++++++..+.    |+.+++++|..+
T Consensus       259 i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          259 VYVGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             EEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             EEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            799999999999997654    789999888543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=1.3e-23  Score=182.62  Aligned_cols=220  Identities=16%  Similarity=0.173  Sum_probs=163.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC-CHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR-DEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~   82 (262)
                      .|++|++|||||+|+||++++++|+++ |++|++++|+.+....+.+   ..++.++.+|++ +.++++++++       
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~~d~~~~~~~~~-------   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK---HERMHFFEGDITINKEWVEYHVK-------   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG---STTEEEEECCTTTCHHHHHHHHH-------
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc---CCCeEEEeCccCCCHHHHHHHhc-------
Confidence            466889999999999999999999998 9999999998776544322   257899999999 9999988887       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------  151 (262)
                      ++|+|||+|+....     ....++..+.+++|+.++..+++++...    +  .++|++||...+...           
T Consensus        91 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~e~~~~  159 (372)
T 3slg_A           91 KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCADEQFDPDASA  159 (372)
T ss_dssp             HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCCSSBCTTTCC
T ss_pred             cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCCCCCCccccc
Confidence            58999999997521     1224556788999999999888877543    2  699999996543221           


Q ss_pred             -------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-------cchHhHH----Hhhh---
Q 024839          152 -------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-------NDVEGFV----CKVA---  210 (262)
Q Consensus       152 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~~~~~~----~~~~---  210 (262)
                             .....|+.+|.+.+.+++.++.+    |++++.++|+.+.+|......       .......    ....   
T Consensus       160 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (372)
T 3slg_A          160 LTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISL  235 (372)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEE
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEE
Confidence                   12237999999999999988765    899999999999998654211       0111111    1100   


Q ss_pred             ----cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCC-Ccc
Q 024839          211 ----NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDG-GFT  249 (262)
Q Consensus       211 ----~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg-G~~  249 (262)
                          .....++.++|++++++.++..+.....|+.+++.+ |..
T Consensus       236 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          236 VDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             GGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             eCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence                111246789999999999997764345689999998 543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=1.5e-22  Score=177.47  Aligned_cols=170  Identities=18%  Similarity=0.180  Sum_probs=133.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCeEEEeeCCchh---------HHHH---HhhhCC----Cc---eEEEEecCCCH
Q 024839            8 GKVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQDEL---------GNQV---VSSIGP----EK---ASYRHCDVRDE   67 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~-~~g~~V~~~~r~~~~---------~~~~---~~~~~~----~~---~~~~~~D~~~~   67 (262)
                      ++++|||||+|+||++++++|+ ++|++|++++|....         .+.+   .+.+..    .+   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999887543         2222   222221    24   88999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      +++++++++    ++++|+|||+|+....     ..+.+++.+.+++|+.++..+++++.    +.+ .++||++||...
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAML----LHK-CDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc-----CcchhhHHHHHHHHhHHHHHHHHHHH----HhC-CCEEEEECCHHH
Confidence            998887763    4569999999997521     11346688999999999999998754    334 579999999654


Q ss_pred             cCCCC------------------CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCC
Q 024839          148 TVGGS------------------GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPF  194 (262)
Q Consensus       148 ~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~  194 (262)
                      +....                  ....|+.+|++.+.+++.++.++   |++++.++|+.+.+|.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            42221                  25689999999999999999986   8999999999998875

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=3.7e-24  Score=183.01  Aligned_cols=244  Identities=13%  Similarity=0.007  Sum_probs=174.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHH-HcCCeEEEeeCCchhH------------H---HHHhhhCCCceEEEEecCCCHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQDELG------------N---QVVSSIGPEKASYRHCDVRDEKQ   69 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~-~~g~~V~~~~r~~~~~------------~---~~~~~~~~~~~~~~~~D~~~~~~   69 (262)
                      ..+|+|||||||+|||++++..|+ +.|+.++++++..+..            .   +..++.+ .+...+.||++++++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-LYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-CCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-CCceeEeCCCCCHHH
Confidence            458999999999999999999998 6899999988764322            1   2222223 578899999999999


Q ss_pred             HHHHHHHHHHHhCCcCEEEeCCcCCCC------------CCC---------------------cCCCCHHHHHHHHHH--
Q 024839           70 VEETVAYAIEKYGSLDIMYSNAGVAGP------------VGT---------------------ILDLDMAQFDRTIAT--  114 (262)
Q Consensus        70 i~~~~~~~~~~~~~~d~li~~ag~~~~------------~~~---------------------~~~~~~~~~~~~~~~--  114 (262)
                      ++++++++.+++|++|+||||++....            .++                     +...+.++++....+  
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            999999999999999999999996410            001                     112345666655554  


Q ss_pred             -HhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC--CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc
Q 024839          115 -NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS--GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA  191 (262)
Q Consensus       115 -nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~  191 (262)
                       ...+.|...+...+.|.  . .++++.+|+..+....|  ....++.+|++++..++.|+.+++  ++++++++||.+.
T Consensus       207 ~s~~s~w~~al~~a~lla--~-G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~v  281 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLE--E-GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLV  281 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEE--E-EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCC
T ss_pred             hhHHHHHHHHHHhhhccc--C-CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccc
Confidence             44445555555555442  2 58999999988876544  335789999999999999999997  4899999999999


Q ss_pred             CCCCCCCc--cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccccCcccccc
Q 024839          192 TPFSAGTI--NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAVTNVMSMLE  259 (262)
Q Consensus       192 t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~~~~~~~~~  259 (262)
                      |.-....+  +.....+.+.+   +...+.|.+.+.+.+|..+. -|-++..+.+|..-.++.--|+|.+
T Consensus       282 T~AssaIP~~ply~~~l~kvm---k~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~d~~el~~  347 (401)
T 4ggo_A          282 TRASAVIPVIPLYLASLFKVM---KEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRIDDWELEE  347 (401)
T ss_dssp             CTTGGGSSSHHHHHHHHHHHH---HHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEESCTTTTCH
T ss_pred             cchhhcCCCchHHHHHHHHHH---HhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccCchhhcCH
Confidence            98655442  22222333332   33456688888888888642 2333344668887778887777764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.90  E-value=4.4e-23  Score=177.26  Aligned_cols=216  Identities=14%  Similarity=0.144  Sum_probs=158.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE-KQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~d~   86 (262)
                      +++|||||+|+||++++++|+++ |++|++++|+.+.....   ....++.++.+|+++. +.++++++       ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHVK-------KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---TTCTTEEEEECCTTTCSHHHHHHHH-------HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh---hcCCCeEEEeccccCcHHHHHhhcc-------CCCE
Confidence            47999999999999999999998 89999999987665432   1234688999999984 55666665       5899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC--------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS--------------  152 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~--------------  152 (262)
                      |||+||....     ....+++.+.+++|+.++..+++++.+    .  .+++|++||...+....              
T Consensus        71 vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~  139 (345)
T 2bll_A           71 VLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (345)
T ss_dssp             EEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             EEEcccccCc-----cchhcCHHHHHHHHHHHHHHHHHHHHH----h--CCeEEEEecHHHcCCCCCCCcCCcccccccC
Confidence            9999996421     012345778999999999988887653    2  27999999976542211              


Q ss_pred             ----CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-------cchHhHH----Hhhh-------
Q 024839          153 ----GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-------NDVEGFV----CKVA-------  210 (262)
Q Consensus       153 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~~~~~~----~~~~-------  210 (262)
                          ....|+.+|.+.+.+++.++.++   |++++.++||.+.+|......       .......    ....       
T Consensus       140 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  216 (345)
T 2bll_A          140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  216 (345)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred             cccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCC
Confidence                12279999999999999998875   899999999999988653210       0111111    1100       


Q ss_pred             cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          211 NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       211 ~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      .....++.++|++++++.++.......+|+.+++.+|.
T Consensus       217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            01123779999999999999765434578999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.90  E-value=2.1e-22  Score=162.35  Aligned_cols=203  Identities=12%  Similarity=0.041  Sum_probs=134.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|+++|++|++++|+.++...+.     .++.++.+|++|+++         +.+.++|+|||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~---------~~~~~~d~vi~   67 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL---------SDLSDQNVVVD   67 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH---------HHHTTCSEEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh---------hhhcCCCEEEE
Confidence            5999999999999999999999999999999987765442     468899999999877         22357999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC------------CCccc
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS------------GPHAY  157 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------------~~~~Y  157 (262)
                      +||....              ...+|+.+    ++.+++.+++.+ .+++|++||..+..+.+            ....|
T Consensus        68 ~ag~~~~--------------~~~~~~~~----~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  128 (221)
T 3ew7_A           68 AYGISPD--------------EAEKHVTS----LDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYY  128 (221)
T ss_dssp             CCCSSTT--------------TTTSHHHH----HHHHHHHHCSCC-SSEEEEECCCC-------------------CCCS
T ss_pred             CCcCCcc--------------ccchHHHH----HHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHH
Confidence            9997421              02234444    455555565554 68999999988765432            24569


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +.+|.+.+.+. .+..  ...|++++.++||.+.++......................+++++|+|++++.++..+.  .
T Consensus       129 ~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~  203 (221)
T 3ew7_A          129 PTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN--H  203 (221)
T ss_dssp             CCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCS--C
T ss_pred             HHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc--c
Confidence            99999998873 2222  15799999999999998721111000000000000112347899999999999997664  4


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      .|+.+++.|-...
T Consensus       204 ~g~~~~~~~~~~~  216 (221)
T 3ew7_A          204 LNEHFTVAGKLEH  216 (221)
T ss_dssp             TTSEEECCC----
T ss_pred             cCCEEEECCCCcc
Confidence            5899998876544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=3e-22  Score=173.97  Aligned_cols=223  Identities=15%  Similarity=0.112  Sum_probs=156.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhhC------CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSIG------PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.      ..++.++.+|++++++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865421 1111111      246888999999999999988865   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------  151 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------  151 (262)
                        ++|+|||+||....     ..+.+++.+.+++|+.++..+++++.+...+ + .++||++||...+.+.         
T Consensus        78 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCccC
Confidence              79999999997532     2344567889999999999999988764321 1 3799999997654321         


Q ss_pred             --CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cc-hHhHHH----hhh--------cccCC
Q 024839          152 --SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-ND-VEGFVC----KVA--------NLKGI  215 (262)
Q Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~-~~~~~~----~~~--------~~~~~  215 (262)
                        .....|+.+|++.+.+++.++.++   ++.+..+.|..+.+|...... .. ......    ...        .....
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  225 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceee
Confidence              235689999999999999999885   677778888777766432211 00 011111    000        01124


Q ss_pred             CCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          216 VLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       216 ~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++.++|++++++.++..+.    ++.+++.+|..
T Consensus       226 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          226 WGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             CEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             eeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence            7789999999999886543    46788777653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.90  E-value=3.1e-23  Score=172.51  Aligned_cols=192  Identities=16%  Similarity=0.112  Sum_probs=148.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||+|+||++++++|+++|++|++++|+.+...      . .++.++.+|+++++++.++++       ++|+||
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   68 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------E-AHEEIVACDLADAQAVHDLVK-------DCDGII   68 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------C-TTEEECCCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------C-CCccEEEccCCCHHHHHHHHc-------CCCEEE
Confidence            68999999999999999999999999999999865321      1 357889999999999888776       699999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC------------CCcc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS------------GPHA  156 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------------~~~~  156 (262)
                      |+|+.. .        .+++.+.+++|+.++..+++++.+    .+ .++||++||.....+.+            ....
T Consensus        69 ~~a~~~-~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~  134 (267)
T 3ay3_A           69 HLGGVS-V--------ERPWNDILQANIIGAYNLYEAARN----LG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSL  134 (267)
T ss_dssp             ECCSCC-S--------CCCHHHHHHHTHHHHHHHHHHHHH----TT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSH
T ss_pred             ECCcCC-C--------CCCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCCh
Confidence            999964 1        234678999999999999998754    33 57999999987654322            3478


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc-CCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVA-TPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+.+|++.+.+++.++.+   +|++++.++||.+. ++.      . ..       ....+++++|+++++..++..+..
T Consensus       135 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~------~-~~-------~~~~~~~~~dva~~~~~~~~~~~~  197 (267)
T 3ay3_A          135 YGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK------D-AR-------MMATWLSVDDFMRLMKRAFVAPKL  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC------S-HH-------HHHHBCCHHHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC------C-CC-------eeeccccHHHHHHHHHHHHhCCCC
Confidence            999999999999988654   68999999999985 321      0 00       113367999999999999976532


Q ss_pred             ceeceEEeeCCC
Q 024839          236 YVSGHDLVVDGG  247 (262)
Q Consensus       236 ~i~G~~i~~dgG  247 (262)
                        .+..+++.++
T Consensus       198 --~~~~~~~~~~  207 (267)
T 3ay3_A          198 --GCTVVYGASA  207 (267)
T ss_dssp             --CEEEEEECCS
T ss_pred             --CceeEecCCC
Confidence              2345555443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=3.9e-22  Score=170.86  Aligned_cols=224  Identities=16%  Similarity=0.073  Sum_probs=160.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      -.++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+ ...++.++.+|++++++++++++.+     +
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            35789999999999999999999999999999999865421 112222 2246889999999999999988765     7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------C
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------S  152 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~  152 (262)
                      +|+|||+||....     ..+.+++.+.+++|+.++..+++++.+.    +..+++|++||...+.+.           .
T Consensus        87 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           87 PQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             CSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999999996421     1123457789999999999999987653    213799999997654322           1


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cc-hHhHHHh---hh-c--------ccCCCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-ND-VEGFVCK---VA-N--------LKGIVLK  218 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~-~~~~~~~---~~-~--------~~~~~~~  218 (262)
                      ....|+.+|.+.+.+++.++.++   |+.+..++|+.+.+|...... .. .......   .. .        ....++.
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence            24589999999999999998875   788899999999887543221 00 1111110   00 0        0123678


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++|++++++.++..+.    ++.+++.+|..+
T Consensus       235 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence            8999999999997643    367888777543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.90  E-value=1e-22  Score=174.10  Aligned_cols=220  Identities=15%  Similarity=0.142  Sum_probs=159.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||+|+||++++++|+++|++|++++|......   +.+. .++.++.+|+++++++++++++     .++|+||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vi   72 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVM   72 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC-TTSEEEECCTTCHHHHHHHHHH-----SCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC-CCcEEEECCCCCHHHHHHHHhh-----cCCCEEE
Confidence            57999999999999999999999999999988754332   2222 2688999999999998888765     3799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y  157 (262)
                      |+|+....     ..+.+++.+.+++|+.++..+++++.    +.+ .+++|++||...+...           .....|
T Consensus        73 h~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y  142 (330)
T 2c20_A           73 HFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMD----EFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTY  142 (330)
T ss_dssp             ECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHH
T ss_pred             ECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHH----HcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChH
Confidence            99996521     11345688899999999999988764    333 5799999997654321           235789


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-------ccchHhHHHh----hhc---------------
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-------INDVEGFVCK----VAN---------------  211 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-------~~~~~~~~~~----~~~---------------  211 (262)
                      +.+|.+.+.+++.++.++   |++++.++||.+.+|.....       ..........    ...               
T Consensus       143 ~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  219 (330)
T 2c20_A          143 GETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGT  219 (330)
T ss_dssp             HHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCc
Confidence            999999999999998774   89999999999998752111       1111111111    000               


Q ss_pred             ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 ~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ....++.++|+++++..++........|+.+++.+|..+
T Consensus       220 ~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          220 CIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             eeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence            012356799999999998864322223688998877544

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=8.5e-23  Score=177.80  Aligned_cols=222  Identities=13%  Similarity=0.044  Sum_probs=159.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+..   ...++.++.+|++|++++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987543     22211111   1246889999999999999988865   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  150 (262)
                        ++|+|||+||....     ..+.+++.+.+++|+.++..+++++.+... ++ .++||++||...+..          
T Consensus       102 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~-~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGL-IN-SVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TT-TCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCC-Cc-cceEEEecchhhhCCCCCCCCCccC
Confidence              79999999996421     123567889999999999999998876432 11 379999999776532          


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-c-hHhHH----Hhhh--------cccCC
Q 024839          151 -GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-D-VEGFV----CKVA--------NLKGI  215 (262)
Q Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~-~~~~~----~~~~--------~~~~~  215 (262)
                       ......|+.+|++.+.+++.++.++   ++.+..++|+.+.+|....... . .....    ....        .....
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  249 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  249 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceee
Confidence             1235689999999999999999875   7888889998887775322110 0 01111    1100        01124


Q ss_pred             CCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          216 VLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       216 ~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      ++.++|++++++.++..+.    ++.+++.+|..
T Consensus       250 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          250 WGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             CEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             eEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence            6789999999999986543    35677776653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.90  E-value=1.8e-22  Score=163.34  Aligned_cols=199  Identities=12%  Similarity=-0.021  Sum_probs=140.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|+++|++|++++|+.++...+.    ..++.++.+|++|+++         +.+.++|+|||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~D~~d~~~---------~~~~~~d~vi~   68 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----GATVATLVKEPLVLTE---------ADLDSVDAVVD   68 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----CTTSEEEECCGGGCCH---------HHHTTCSEEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----CCCceEEecccccccH---------hhcccCCEEEE
Confidence            5999999999999999999999999999999987765432    2578899999999877         23357999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC--------------Cc
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG--------------PH  155 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--------------~~  155 (262)
                      +||....  +  +        ...+|+.+...+++    .+++.+  +++|++||..+..+.+.              ..
T Consensus        69 ~ag~~~~--~--~--------~~~~n~~~~~~l~~----a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
T 3h2s_A           69 ALSVPWG--S--G--------RGYLHLDFATHLVS----LLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQP  130 (224)
T ss_dssp             CCCCCTT--S--S--------CTHHHHHHHHHHHH----TCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGST
T ss_pred             CCccCCC--c--c--------hhhHHHHHHHHHHH----HHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccch
Confidence            9997511  1  0        12456666544444    444443  89999999876654433              56


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .|+.+|.+.+.+    .......|++++.++||++.++............ .........+++++|+|+++++++..+. 
T Consensus       131 ~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~i~~~DvA~~~~~~l~~~~-  204 (224)
T 3h2s_A          131 WYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDT-LLVGEDGQSHITTGNMALAILDQLEHPT-  204 (224)
T ss_dssp             THHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSB-CCCCTTSCCBCCHHHHHHHHHHHHHSCC-
T ss_pred             hhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccc-cccCCCCCceEeHHHHHHHHHHHhcCcc-
Confidence            899999998854    2222467999999999999987322111000000 0001122457899999999999997654 


Q ss_pred             ceeceEEeeCC
Q 024839          236 YVSGHDLVVDG  246 (262)
Q Consensus       236 ~i~G~~i~~dg  246 (262)
                       ..|+.+.+.+
T Consensus       205 -~~g~~~~~~~  214 (224)
T 3h2s_A          205 -AIRDRIVVRD  214 (224)
T ss_dssp             -CTTSEEEEEE
T ss_pred             -ccCCEEEEec
Confidence             3588888753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=3.8e-23  Score=177.70  Aligned_cols=225  Identities=15%  Similarity=0.104  Sum_probs=154.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-------CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHG-------AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .++++++|||||+|+||++++++|+++|       ++|++++|+.+....    ....++.++.+|++++++++++++  
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~--   84 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVE--   84 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHH--
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHh--
Confidence            4678999999999999999999999999       899999998654321    122468889999999999888775  


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-C----
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-S----  152 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~----  152 (262)
                          +++|+|||+||...      ..+.+++.+.+++|+.++..+++++.+...+++..++||++||...+.+. +    
T Consensus        85 ----~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~  154 (342)
T 2hrz_A           85 ----ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIP  154 (342)
T ss_dssp             ----TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBC
T ss_pred             ----cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcC
Confidence                47999999999642      12456788999999999999999887754322114799999998765432 1    


Q ss_pred             ------CCccchhhhHHHHHHHHHHHHHHC--CCCcEEEEEe--CCCccCCCCCCCccc-hHhHHHhhh--cccC-----
Q 024839          153 ------GPHAYTISKHGLLGLVRSAASELG--KHGIRVNCVS--PFGVATPFSAGTIND-VEGFVCKVA--NLKG-----  214 (262)
Q Consensus       153 ------~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~i~--pG~v~t~~~~~~~~~-~~~~~~~~~--~~~~-----  214 (262)
                            ....|+.+|.+.+.+++.++.+..  ...+|++.+.  ||...++... .... .........  .+..     
T Consensus       155 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  233 (342)
T 2hrz_A          155 DEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-FFSNILREPLVGQEAVLPVPESIRH  233 (342)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-HHHHHHHHHHTTCCEEECSCTTCEE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-HHHHHHHHHhcCCCeeccCCCccce
Confidence                  457899999999999998887631  1224455554  5554332110 0000 000000100  0111     


Q ss_pred             CCCCHHHHHHHHHHHcCCCCC-ceeceEEeeCC
Q 024839          215 IVLKAKHVAEAALFLASDESA-YVSGHDLVVDG  246 (262)
Q Consensus       215 ~~~~~~~va~~~~~l~~~~~~-~i~G~~i~~dg  246 (262)
                      .++.++|++++++.++..... ...|+.+++.|
T Consensus       234 ~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          234 WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             EEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             eeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            146899999999999865421 11367788853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.89  E-value=2.2e-23  Score=178.91  Aligned_cols=220  Identities=20%  Similarity=0.212  Sum_probs=148.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH--HhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV--VSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~--~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+.....  ...+. ..++.++++|++++++++++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            68999999999999999999999999999888875532111  11121 2467889999999988887765       68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHH-HHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------C---
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQ-FDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------G---  151 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------~---  151 (262)
                      |+|||+|+...       ...++ ..+.+++|+.++..+++++.+..   + .++||++||..+..+         .   
T Consensus        82 D~Vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           82 DFVFHVATPVH-------FASEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             SEEEEESSCCC-------C---------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CEEEEeCCccC-------CCCCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCcccChh
Confidence            99999998541       11222 34589999999999999876531   2 479999999763210         0   


Q ss_pred             ---------C---CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH----Hh----hh-
Q 024839          152 ---------S---GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV----CK----VA-  210 (262)
Q Consensus       152 ---------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~----~~----~~-  210 (262)
                               +   ....|+.||.+.+.+++.++.+   +|++++.++||.+++|.............    ..    .. 
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  227 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLING  227 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccccc
Confidence                     0   0115999999999999887765   48999999999999997543321111000    00    00 


Q ss_pred             -----cccC--CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 -----NLKG--IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 -----~~~~--~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                           .+.+  .++.++|++++++++++...  ..|.++..+++.++
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~~~s~  272 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGRYICCAANTSV  272 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEEEEECSEEECH
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCcEEEecCCCCH
Confidence                 0001  47899999999999996532  35665444444433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.89  E-value=2.5e-23  Score=214.90  Aligned_cols=176  Identities=12%  Similarity=0.126  Sum_probs=138.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhH---HHHHhhh--CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELG---NQVVSSI--GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+|++|||||++|||+++|++|+++|++ |++++|+..+.   ++..+++  ...++.++.||++|.++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            5899999999999999999999999997 88888886443   2333333  12578899999999999999999987 4


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+++.++|++++++|+.|++++.+.+.+.|.+   .++||++||..+..+.++..+|+++
T Consensus      1962 ~g~id~lVnnAgv~-~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVL-RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCCcHHHHHH
Confidence            79999999999987 4578889999999999999999999999999888743   4899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCcc
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVA  191 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~  191 (262)
                      |+++++|++.+..+    |+...++..|.+.
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999987765    7888888887764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.89  E-value=3.9e-22  Score=169.34  Aligned_cols=206  Identities=13%  Similarity=0.084  Sum_probs=154.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |++|||||+|+||++++++|+++|++|++++|+..... +      .++.++.+|++ .+++.++++       ++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~Dl~-~~~~~~~~~-------~~d~Vi   67 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I------NDYEYRVSDYT-LEDLINQLN-------DVDAVV   67 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHHHTT-------TCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C------CceEEEEcccc-HHHHHHhhc-------CCCEEE
Confidence            68999999999999999999999999999999844332 1      16889999999 988887776       799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y  157 (262)
                      |+|+.....         +..+.+++|+.++..+++++..    .+ .+++|++||...+.+.           .....|
T Consensus        68 h~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~----~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           68 HLAATRGSQ---------GKISEFHDNEILTQNLYDACYE----NN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             ECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EccccCCCC---------ChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            999976321         3456788999999888887643    34 5689999996554221           234689


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh---h--------cccCCCCCHHHHHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV---A--------NLKGIVLKAKHVAEAA  226 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~va~~~  226 (262)
                      +.+|.+.+.+++.++.+   .|++++.++|+.+.+|..... ..........   .        .....++.++|+++++
T Consensus       134 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~  209 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSV  209 (311)
T ss_dssp             HHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHH
Confidence            99999999999999886   589999999999999865432 1111111110   0        0112367889999999


Q ss_pred             HHHcCCCCCceeceEEeeCCCccc
Q 024839          227 LFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       227 ~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ..++..+.   .|+.+++.+|..+
T Consensus       210 ~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          210 IYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHhcCC---CCCeEEeCCCCcc
Confidence            99997664   6899999888654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.89  E-value=1.8e-22  Score=169.76  Aligned_cols=197  Identities=15%  Similarity=0.092  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ..+++|||||+|+||++++++|+++|++|++++|+                   .+|+++++++.++++..     ++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~~~~~~~-----~~d~   66 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKFFNEK-----KPNV   66 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHHHHHHhc-----CCCE
Confidence            46799999999999999999999999999999886                   37999999998888755     7999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-----------CCc
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-----------GPH  155 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-----------~~~  155 (262)
                      |||+||....     +.+.+++.+.+++|+.++..+++++.+.    + . ++|++||...+.+..           ...
T Consensus        67 vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~  135 (292)
T 1vl0_A           67 VINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-A-EIVQISTDYVFDGEAKEPITEFDEVNPQS  135 (292)
T ss_dssp             EEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred             EEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEechHHeECCCCCCCCCCCCCCCCcc
Confidence            9999996421     1234678899999999999999987652    3 3 999999976543322           356


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhc------ccCCCCCHHHHHHHHHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~~~l  229 (262)
                      .|+.+|.+.+.+++.++.       .+..++|+.+.+| .................      ....++.++|+|++++++
T Consensus       136 ~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  207 (292)
T 1vl0_A          136 AYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV  207 (292)
T ss_dssp             HHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHH
Confidence            899999999999987642       4788999999887 22211111111111000      124567899999999999


Q ss_pred             cCCCCCceeceEEeeCCCccc
Q 024839          230 ASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++    +|+.+++++|..+
T Consensus       208 ~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          208 IDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHT----CCEEEECCCBSCE
T ss_pred             HhcC----CCcEEEecCCCCc
Confidence            9764    5899999988643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=9e-22  Score=168.85  Aligned_cols=222  Identities=15%  Similarity=0.168  Sum_probs=152.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh----HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++|||||+|+||++++++|+++|++|++++|....    .+.+ +.....++.++.+|++++++++++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHH-HhhcCCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            69999999999999999999999999998764321    2222 1221245788999999999998887642     699


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------C-CC
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------G-SG  153 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~-~~  153 (262)
                      +|||+||.... .    ...+++.+.+++|+.++..+++++.    +.+ .++||++||...+..           . +.
T Consensus        76 ~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  145 (338)
T 1udb_A           76 TVIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEEECCccCcc-c----cchhcHHHHHHHHHHHHHHHHHHHH----hcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCC
Confidence            99999996421 1    1234567889999999999988643    333 579999999765421           1 22


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC---CC-----ccchHhHHHhh----h-----------
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA---GT-----INDVEGFVCKV----A-----------  210 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~---~~-----~~~~~~~~~~~----~-----------  210 (262)
                      ...|+.+|++.+.+++.++.++  .|+++..++|+.+.++...   +.     ...........    .           
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  223 (338)
T 1udb_A          146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCccc
Confidence            5689999999999999999884  3799999999887765210   00     01111111100    0           


Q ss_pred             ----cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          211 ----NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       211 ----~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                          ...+.++.++|++++++.++........++.+++.+|..
T Consensus       224 ~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~  266 (338)
T 1udb_A          224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCC
T ss_pred             CCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCc
Confidence                011235788999999988875321112347888877753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.88  E-value=1.1e-21  Score=168.82  Aligned_cols=217  Identities=17%  Similarity=0.127  Sum_probs=152.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh-hCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS-IGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ..+.++++|||||+|+||++++++|+++|++|++++|.........+. ....++.++.+|+.+..            +.
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~   90 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YI   90 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hc
Confidence            346789999999999999999999999999999999875432221122 22356889999998752            35


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-------------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-------------  149 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-------------  149 (262)
                      ++|+|||+|+.... ..    ..+++.+.+++|+.++..+++++.+.    +  .++|++||...+.             
T Consensus        91 ~~d~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~--~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           91 EVDQIYHLASPASP-PN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             CCSEEEECCSCCSH-HH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             CCCEEEECccccCc-hh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEECcHHHhCCCCCCCCcccccc
Confidence            79999999996421 10    11245688999999999999887642    3  4899999976432             


Q ss_pred             ---CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHH----Hhhhc-------ccC
Q 024839          150 ---GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFV----CKVAN-------LKG  214 (262)
Q Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~----~~~~~-------~~~  214 (262)
                         +......|+.+|.+.+.+++.++.+.   |++++.++||.+.+|........ ...+.    .....       ...
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTR  236 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEE
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEE
Confidence               22234579999999999999998874   89999999999999864321111 11111    11100       112


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          215 IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       215 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      .++.++|+|++++.++..+.    |+.+++.+|..+
T Consensus       237 ~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  268 (343)
T 2b69_A          237 AFQYVSDLVNGLVALMNSNV----SSPVNLGNPEEH  268 (343)
T ss_dssp             ECEEHHHHHHHHHHHHTSSC----CSCEEESCCCEE
T ss_pred             eeEeHHHHHHHHHHHHhcCC----CCeEEecCCCCC
Confidence            36789999999999986542    677888887543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-23  Score=167.70  Aligned_cols=198  Identities=14%  Similarity=0.038  Sum_probs=149.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+|++|||||+|+||++++++|+++|+  +|++++|+.+.        ...++.++.+|+.+++++.+++         +
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~~~~~~~~~D~~~~~~~~~~~---------~   66 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLPQLDGS---------I   66 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGGGCCSC---------C
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cCCCceEEeccccCHHHHHHhh---------h
Confidence            468999999999999999999999998  99999998765        1246788899999887776554         8


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+|||++|....       ..+++.+.+++|+.++..+++++.+    .+ .+++|++||.....+  ....|+.+|.++
T Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~--~~~~y~~sK~~~  132 (215)
T 2a35_A           67 DTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADAK--SSIFYNRVKGEL  132 (215)
T ss_dssp             SEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred             cEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----cC-CCEEEEECCcccCCC--CccHHHHHHHHH
Confidence            999999996421       2345788999999999998887653    33 579999999887643  356899999999


Q ss_pred             HHHHHHHHHHHCCCCcE-EEEEeCCCccCCCCCCCccchHhHHHhhhcc----cCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          165 LGLVRSAASELGKHGIR-VNCVSPFGVATPFSAGTINDVEGFVCKVANL----KGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +.+++.       .|++ ++.++||++.+|.......  ... .....+    ...+++++|+|+++..++..+.    +
T Consensus       133 e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~  198 (215)
T 2a35_A          133 EQALQE-------QGWPQLTIARPSLLFGPREEFRLA--EIL-AAPIARILPGKYHGIEACDLARALWRLALEEG----K  198 (215)
T ss_dssp             HHHHTT-------SCCSEEEEEECCSEESTTSCEEGG--GGT-TCCCC----CHHHHHHHHHHHHHHHHHHTCCC----S
T ss_pred             HHHHHH-------cCCCeEEEEeCceeeCCCCcchHH--HHH-HHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----C
Confidence            998864       3898 9999999999885431100  000 000001    1235688999999999997653    6


Q ss_pred             eEEeeCCCcc
Q 024839          240 HDLVVDGGFT  249 (262)
Q Consensus       240 ~~i~~dgG~~  249 (262)
                      +.+++.++..
T Consensus       199 ~~~~i~~~~~  208 (215)
T 2a35_A          199 GVRFVESDEL  208 (215)
T ss_dssp             EEEEEEHHHH
T ss_pred             CceEEcHHHH
Confidence            7788877653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.88  E-value=6.6e-22  Score=167.72  Aligned_cols=214  Identities=15%  Similarity=0.110  Sum_probs=156.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +|++|||||+|+||++++++|+++  |++|++++|+.+... ..     .++.++.+|++|.+++++++++.     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~-----~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-----NSGPFEVVNALDFNQIEHLVEVH-----KIT   70 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-----HSSCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-----CCCceEEecCCCHHHHHHHHhhc-----CCC
Confidence            467999999999999999999999  899999998866532 11     14668999999999998887753     799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------CC
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------SG  153 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~  153 (262)
                      +|||+|+....      ...+++.+.+++|+.++..+++++.+    .+ .+++|++||...+.+.            ..
T Consensus        71 ~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~  139 (312)
T 2yy7_A           71 DIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEP  139 (312)
T ss_dssp             EEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCC
T ss_pred             EEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCccccCcCCC
Confidence            99999986421      12356788999999999999887653    33 5699999998654331            23


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHH----Hhhhc-------ccCCCCCH
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFV----CKVAN-------LKGIVLKA  219 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~----~~~~~-------~~~~~~~~  219 (262)
                      ...|+.+|.+.+.+++.++.++   |++++.++|+.+.++......   .......    .....       ....++.+
T Consensus       140 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  216 (312)
T 2yy7_A          140 STVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYM  216 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEH
T ss_pred             CchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeH
Confidence            5689999999999999998875   899999999999986532211   1111111    11000       11225678


Q ss_pred             HHHHHHHHHHcCCCCCcee-ceEEeeCC
Q 024839          220 KHVAEAALFLASDESAYVS-GHDLVVDG  246 (262)
Q Consensus       220 ~~va~~~~~l~~~~~~~i~-G~~i~~dg  246 (262)
                      +|+++++..++..+..... |+.+++.|
T Consensus       217 ~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          217 DDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHhCcccccccCceEEeCC
Confidence            9999999999976543232 57888875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=1.4e-21  Score=182.08  Aligned_cols=219  Identities=14%  Similarity=0.155  Sum_probs=160.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH-HHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ-VEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~   83 (262)
                      +++|++|||||+|+||++++++|+++ |++|++++|+.+.....   ....++.++.+|+++.++ ++++++       +
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~~-------~  382 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHVK-------K  382 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG---TTCTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh---ccCCceEEEECCCCCcHHHHHHhhc-------C
Confidence            46789999999999999999999998 89999999987654332   123568899999998765 555554       5


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------  151 (262)
                      +|+|||+||....     ....+++.+.+++|+.++..+++++.+    .  .+++|++||...+.+.            
T Consensus       383 ~D~Vih~Aa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~r~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T 1z7e_A          383 CDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNL  451 (660)
T ss_dssp             CSEEEECCCCCCT-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCSSSBCTTTCCE
T ss_pred             CCEEEECceecCc-----cccccCHHHHHHhhhHHHHHHHHHHHH----h--CCEEEEEecHHHcCCCCCcccCCCcccc
Confidence            8999999997521     112345778999999999998887754    2  2799999997654221            


Q ss_pred             ------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-------ccchHhHHHhh--hc-----
Q 024839          152 ------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-------INDVEGFVCKV--AN-----  211 (262)
Q Consensus       152 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-------~~~~~~~~~~~--~~-----  211 (262)
                            .....|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....       ...........  ..     
T Consensus       452 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  528 (660)
T 1z7e_A          452 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI  528 (660)
T ss_dssp             EECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEE
T ss_pred             ccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEe
Confidence                  112369999999999999998875   89999999999999865321       00111111110  00     


Q ss_pred             ----ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          212 ----LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       212 ----~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                          ....++.++|+++++++++.......+|+.+++++|.
T Consensus       529 g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          529 DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence                1123678999999999999765444679999999884

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=2.1e-21  Score=164.32  Aligned_cols=214  Identities=14%  Similarity=0.132  Sum_probs=152.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||+|+||++++++|+++| ++|++++|.......  +.+.  .+. +.+|+.+.++++++++...  ++++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~--~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLV--DLN-IADYMDKEDFLIQIMAGEE--FGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHH--TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhcC--cce-eccccccHHHHHHHHhccc--cCCCcEEE
Confidence            48999999999999999999999 999999987654211  1111  122 6789999888877765110  12699999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccc
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAY  157 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y  157 (262)
                      |+|+....       ..+++.+.+++|+.++..+++++.+.    + . ++|++||...+.+.           .....|
T Consensus        74 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           74 HEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             ECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             ECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            99997522       22356789999999999999887653    4 4 99999998654322           124589


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC---ccchHhHHH-----------hhhcc-cCCCCCHHHH
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT---INDVEGFVC-----------KVANL-KGIVLKAKHV  222 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~~-----------~~~~~-~~~~~~~~~v  222 (262)
                      +.+|.+.+.+++.++.+   .|++++.++||.+.+|.....   .........           ..... ...++.++|+
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            99999999999988765   589999999999998864311   000000100           00111 3346789999


Q ss_pred             HHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          223 AEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       223 a~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++++.++..+.    |+.+++.+|..+
T Consensus       218 a~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          218 ADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            999999997553    789999887544

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.86  E-value=3.6e-21  Score=163.85  Aligned_cols=208  Identities=15%  Similarity=0.159  Sum_probs=152.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++++|||||+|+||++++++|+++|++|+++.|+.                  .+|+++.++++++++..     ++|+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~~~~~-----~~d~v   59 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDFFASE-----RIDQV   59 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHHHHhc-----CCCEE
Confidence            57899999999999999999999999999887752                  26999999998888754     79999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------------C-
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------------G-  151 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------~-  151 (262)
                      ||+|+....    .....++..+.+++|+.++..+++++.+    .+ .+++|++||...+.+               . 
T Consensus        60 ih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  130 (321)
T 1e6u_A           60 YLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  130 (321)
T ss_dssp             EECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence            999986421    0123455678899999999998887754    33 569999999765421               1 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc---cchHhHHHhh---------hc-------c
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI---NDVEGFVCKV---------AN-------L  212 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~---------~~-------~  212 (262)
                      +....|+.+|.+.+.+++.++.++   |++++.++|+.+.+|......   ..........         ..       .
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~  207 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  207 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCE
Confidence            112489999999999999998875   899999999999998654211   1111111110         00       1


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCc------eeceEEeeCCCccc
Q 024839          213 KGIVLKAKHVAEAALFLASDESAY------VSGHDLVVDGGFTA  250 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~------i~G~~i~~dgG~~~  250 (262)
                      ...++.++|++++++.++......      ..|+.+++.+|..+
T Consensus       208 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          208 MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             EECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             EEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence            123568999999999999654311      13688999777543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.86  E-value=3.2e-21  Score=160.42  Aligned_cols=196  Identities=17%  Similarity=0.091  Sum_probs=142.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|+ +|++|++++|+.+..       .  +   +.+|++++++++++++.+     ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~   63 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------G--G---YKLDLTDFPRLEDFIIKK-----RPDVIIN   63 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------T--C---EECCTTSHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------C--C---ceeccCCHHHHHHHHHhc-----CCCEEEE
Confidence            59999999999999999999 589999999987421       1  1   889999999999988765     7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC----------CCccchh
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS----------GPHAYTI  159 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------~~~~Y~~  159 (262)
                      |||....     +.+.+++.+.+++|+.++..+++++.+    .  .+++|++||.....+.+          ....|+.
T Consensus        64 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~  132 (273)
T 2ggs_A           64 AAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGL  132 (273)
T ss_dssp             CCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHH
T ss_pred             CCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHH
Confidence            9997521     123567889999999999999998764    2  35999999987764432          2568999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhc-----ccCCCCCHHHHHHHHHHHcCCCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN-----LKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +|++++.+++.         +....++|+.+.++  ................     ....++.++|+++++.++++++.
T Consensus       133 sK~~~e~~~~~---------~~~~~iR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          133 SKLLGETFALQ---------DDSLIIRTSGIFRN--KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             HHHHHHHHHCC---------TTCEEEEECCCBSS--SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhC---------CCeEEEeccccccc--cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc
Confidence            99999999886         23456777777641  1111100000001000     03467899999999999997642


Q ss_pred             CceeceEEeeCCCccc
Q 024839          235 AYVSGHDLVVDGGFTA  250 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~  250 (262)
                         +| .++++| ..+
T Consensus       202 ---~g-~~~i~~-~~~  212 (273)
T 2ggs_A          202 ---TG-IIHVAG-ERI  212 (273)
T ss_dssp             ---CE-EEECCC-CCE
T ss_pred             ---CC-eEEECC-Ccc
Confidence               45 788887 433

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.86  E-value=1.2e-21  Score=164.26  Aligned_cols=195  Identities=13%  Similarity=0.044  Sum_probs=146.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|+++|++|++++|.                   ++|+.|.+++.++++..     ++|+|||
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~~~~~~~-----~~d~vi~   62 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQQVVQEI-----RPHIIIH   62 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            89999999999999999999999999999982                   37999999999888865     7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~  158 (262)
                      +|+....     ....+++.+.+++|+.++..+++++.+.    +  .++|++||...+.+.           .+...|+
T Consensus        63 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  131 (287)
T 3sc6_A           63 CAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV----G--AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYG  131 (287)
T ss_dssp             CCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHH
T ss_pred             CCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHH
Confidence            9997521     1122467889999999999999987543    2  479999997654322           2356899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh------cccCCCCCHHHHHHHHHHHcCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA------NLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      .+|.+.+.+++.++.       +++.++|+.+.+|.................      .....++.++|+++++.+++..
T Consensus       132 ~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          132 ASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            999999999987643       468999999998754332111111111000      0113466799999999999977


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      +.    ++.+++.+|..+
T Consensus       205 ~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          205 SL----YGTYHVSNTGSC  218 (287)
T ss_dssp             CC----CEEEECCCBSCE
T ss_pred             CC----CCeEEEcCCCcc
Confidence            54    568999887643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.2e-20  Score=169.41  Aligned_cols=221  Identities=14%  Similarity=0.112  Sum_probs=156.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc---CCeEEEeeCCchhHH---HHHhhhCC--------------CceEEEEecC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH---GAFVIIADIQDELGN---QVVSSIGP--------------EKASYRHCDV   64 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~---g~~V~~~~r~~~~~~---~~~~~~~~--------------~~~~~~~~D~   64 (262)
                      ..++|+||||||+|+||++++++|+++   |++|+++.|+.+...   ++.+.+..              .++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            457899999999999999999999999   999999999865432   22222222              5799999999


Q ss_pred             C------CHHHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcE
Q 024839           65 R------DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGS  138 (262)
Q Consensus        65 ~------~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~  138 (262)
                      +      +.++++++++       ++|+|||+||....         +.+.+.+++|+.++..+++++..    .+ .++
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~  208 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT----TK-LKP  208 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS----SS-CCC
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh----CC-CCe
Confidence            8      6667777665       58999999997532         23456789999999998887642    33 468


Q ss_pred             EEEecCCCccCCCCC----------------------CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC
Q 024839          139 IICTTSTASTVGGSG----------------------PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA  196 (262)
Q Consensus       139 ii~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~  196 (262)
                      +|++||.........                      ...|+.+|.+.+.+++.++.+.   |++++.++||.|.++...
T Consensus       209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~  285 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSY  285 (478)
T ss_dssp             EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSS
T ss_pred             EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCcc
Confidence            999999654322110                      1349999999999999998874   899999999999887431


Q ss_pred             -CC--ccc-hHhHHHhh----hcc---------------cCCCCCHHHHHHHHHHHcCCCC--CceeceEEeeCCCcc
Q 024839          197 -GT--IND-VEGFVCKV----ANL---------------KGIVLKAKHVAEAALFLASDES--AYVSGHDLVVDGGFT  249 (262)
Q Consensus       197 -~~--~~~-~~~~~~~~----~~~---------------~~~~~~~~~va~~~~~l~~~~~--~~i~G~~i~~dgG~~  249 (262)
                       +.  ... ........    ..|               ...++..+|++++++.++....  ....|+++++.++..
T Consensus       286 ~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          286 AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence             11  111 11111110    001               1135789999999999886411  123588999987754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.86  E-value=4.5e-22  Score=169.17  Aligned_cols=211  Identities=14%  Similarity=0.089  Sum_probs=145.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch----hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+..    ....+.+.....++.++.+|+.               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            456899999999999999999999999999999999865    2222211122234556666665               


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------  151 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------  151 (262)
                        ++|+|||+|+..... .    ..++....++ |+.++..+++++...    + .+++|++||...+...         
T Consensus        69 --~~d~vi~~a~~~~~~-~----~~~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E~~  135 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP-R----SFKQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPEDS  135 (321)
T ss_dssp             --TEEEEEECCCCCCHH-H----HTTSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             --cCCEEEECCccCChH-H----HHhCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCCCC
Confidence              699999999975310 0    1111233455 899998888877543    3 5799999997654322         


Q ss_pred             --CCCccchhhhHHHHHHHHHHHHHHCCCCc-EEEEEeCCCccCCCCCCCc--cch-HhHHHhhh-------cccCCCCC
Q 024839          152 --SGPHAYTISKHGLLGLVRSAASELGKHGI-RVNCVSPFGVATPFSAGTI--NDV-EGFVCKVA-------NLKGIVLK  218 (262)
Q Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi-~v~~i~pG~v~t~~~~~~~--~~~-~~~~~~~~-------~~~~~~~~  218 (262)
                        .....|+.+|.+.+.+++.++.+   .|+ +++.++|+.+.+|......  ... ........       .....++.
T Consensus       136 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  212 (321)
T 3vps_A          136 PLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTY  212 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEE
Confidence              23568999999999999998876   589 9999999999998654321  111 11111100       01123578


Q ss_pred             HHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          219 AKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       219 ~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+++++++++..+..   | .+++.+|..+
T Consensus       213 v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          213 ITDVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             HHHHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             HHHHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            99999999999987653   7 9999988654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.86  E-value=7.8e-21  Score=159.27  Aligned_cols=196  Identities=12%  Similarity=0.027  Sum_probs=146.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |++|||||+|+||++++++|+++  |++|++++|+.++...+..    .++.++.+|++|++++.++++       ++|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD----QGVEVRHGDYNQPESLQKAFA-------GVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh----cCCeEEEeccCCHHHHHHHHh-------cCCE
Confidence            46999999999999999999999  9999999998776554332    357889999999998888766       6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      |||+|+.. .       . +      ++|+.+...+++++.    +.+ .+++|++||.....   ....|+.+|.+.+.
T Consensus        70 vi~~a~~~-~-------~-~------~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~  126 (287)
T 2jl1_A           70 LLFISGPH-Y-------D-N------TLLIVQHANVVKAAR----DAG-VKHIAYTGYAFAEE---SIIPLAHVHLATEY  126 (287)
T ss_dssp             EEECCCCC-S-------C-H------HHHHHHHHHHHHHHH----HTT-CSEEEEEEETTGGG---CCSTHHHHHHHHHH
T ss_pred             EEEcCCCC-c-------C-c------hHHHHHHHHHHHHHH----HcC-CCEEEEECCCCCCC---CCCchHHHHHHHHH
Confidence            99999852 1       1 1      568888877777664    334 57999999987642   23489999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh------hcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV------ANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +++.       .|++++.++||.+.++......   .......      ......+++++|+++++..++..+.  .+|+
T Consensus       127 ~~~~-------~~~~~~ilrp~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~  194 (287)
T 2jl1_A          127 AIRT-------TNIPYTFLRNALYTDFFVNEGL---RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENK  194 (287)
T ss_dssp             HHHH-------TTCCEEEEEECCBHHHHSSGGG---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTE
T ss_pred             HHHH-------cCCCeEEEECCEeccccchhhH---HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCc
Confidence            8853       5899999999998776421111   1111110      0112357899999999999997643  3689


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      .++++||..+
T Consensus       195 ~~~i~~~~~~  204 (287)
T 2jl1_A          195 TYNLVSNQPW  204 (287)
T ss_dssp             EEEECCSSCB
T ss_pred             EEEecCCCcC
Confidence            9999998544

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.86  E-value=1.1e-20  Score=160.47  Aligned_cols=210  Identities=14%  Similarity=0.144  Sum_probs=152.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++|||||+|+||++++++|+++  |++|++++|+.+...         ++.++.+|++|+++++++++..     ++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~~~~~~~-----~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEIDRAVEKY-----SIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHHHHHHHT-----TCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHHHHHhhc-----CCcEE
Confidence            4899999999999999999999  899999988765431         3568899999999998887642     79999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------CCCc
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------SGPH  155 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~~  155 (262)
                      ||+|+....      ...+++.+.+++|+.++..+++++.+    .+ .+++|++||.....+.            .+..
T Consensus        67 ih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~  135 (317)
T 3ajr_A           67 FHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQ----HR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRT  135 (317)
T ss_dssp             EECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCS
T ss_pred             EECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCCCCCCccccccCCCCc
Confidence            999986421      12356788999999999999987654    33 5799999998765432            1356


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC---ccchHhHHHh-h--hc--------ccCCCCCHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT---INDVEGFVCK-V--AN--------LKGIVLKAKH  221 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~~~-~--~~--------~~~~~~~~~~  221 (262)
                      .|+.+|.+.+.+++.++.++   |++++.++|+.+..+.....   .......... .  ..        ....++.++|
T Consensus       136 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  212 (317)
T 3ajr_A          136 MFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPD  212 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHH
Confidence            89999999999999988764   89999999877766532111   0101111111 0  00        0112457899


Q ss_pred             HHHHHHHHcCCCCC-ceeceEEeeCCC
Q 024839          222 VAEAALFLASDESA-YVSGHDLVVDGG  247 (262)
Q Consensus       222 va~~~~~l~~~~~~-~i~G~~i~~dgG  247 (262)
                      ++++++.++..+.. ..+|+.+++.|+
T Consensus       213 va~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          213 ALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHhCCccccccCceEecCCc
Confidence            99999988865432 335788998864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.85  E-value=9.1e-21  Score=177.67  Aligned_cols=231  Identities=14%  Similarity=0.147  Sum_probs=157.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH---HhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+.+.....   .+.+...++.++.+|++++++++++++..   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            456789999999999999999999999999999999875432211   11222246788999999999998887743   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  150 (262)
                        ++|+|||+||.... .    ...+...+.+++|+.++..+++++..    .+ .++||++||......          
T Consensus        84 --~~D~Vih~A~~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           84 --KIDSVIHFAGLKAV-G----ESTQIPLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             --CCCEEEECCSCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             --CCCEEEECCcccCc-C----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECcHHHhCCCccccccCCc
Confidence              79999999996521 1    11233467899999999988876543    33 579999999765321          


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--------ccchHhHHHhh------h-
Q 024839          151 -----GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--------INDVEGFVCKV------A-  210 (262)
Q Consensus       151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~------~-  210 (262)
                           ......|+.+|++++.+++.++.+. ..|+++..++|+.+.++.....        ...........      . 
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKL  230 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCce
Confidence                 1234689999999999999998875 4689999999998887632110        01111111110      0 


Q ss_pred             ------------cccCCCCCHHHHHHHHHHHcCCC----CCceeceEEeeCCCccc
Q 024839          211 ------------NLKGIVLKAKHVAEAALFLASDE----SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ------------~~~~~~~~~~~va~~~~~l~~~~----~~~i~G~~i~~dgG~~~  250 (262)
                                  .....++.++|+|++++.++...    ...-.|+.+++.+|..+
T Consensus       231 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~  286 (699)
T 1z45_A          231 YIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS  286 (699)
T ss_dssp             CCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred             EEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCC
Confidence                        01123567899999998887521    11123678888877543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.85  E-value=1.1e-21  Score=166.17  Aligned_cols=214  Identities=16%  Similarity=0.102  Sum_probs=150.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..++++++|||||+|+||++++++|.++|+      +....         ...+..+.+|++|++++.++++..     +
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------WVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------EEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------ccccCceecccCCHHHHHHHHhhc-----C
Confidence            346789999999999999999999999998      11100         012344578999999998888753     6


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------------
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------------  150 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------  150 (262)
                      +|+|||+|+....    ...+.++..+.+++|+.++..+++++..    .+ .+++|++||...+..             
T Consensus        62 ~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           62 PTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFE----VG-ARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             CSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             CCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEEcchhhcCCCCCCCcccccccc
Confidence            9999999997421    0112344677899999999998887643    33 569999999865422             


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc---chHhHHHh--------hhc-----
Q 024839          151 ---GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN---DVEGFVCK--------VAN-----  211 (262)
Q Consensus       151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~--------~~~-----  211 (262)
                         .+...+|+.+|.+.+.+++.++.+.   |++++.++|+.+.+|.......   ....+...        ...     
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence               1112269999999999999998875   8999999999999886532110   01111111        100     


Q ss_pred             --ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 --LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 --~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                        ....++.++|++++++.++..... ..|+++++.+|..+
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEV  249 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCE
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCce
Confidence              112357899999999999975432 45788988877544

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.85  E-value=1.4e-21  Score=164.84  Aligned_cols=202  Identities=13%  Similarity=0.031  Sum_probs=146.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|+||++++++|. +|++|++++|+.+               .+.+|+.+++++.++++..     ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~~~~~-----~~d~vih   60 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAETVRKL-----RPDVIVN   60 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999 8999999998752               3578999999998888754     6999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~  158 (262)
                      +|+....     ..+.+++.+.+++|+.++..+++++.+    .+  .++|++||...+.+.           .....|+
T Consensus        61 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  129 (299)
T 1n2s_A           61 AAAHTAV-----DKAESEPELAQLLNATSVEAIAKAANE----TG--AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (299)
T ss_dssp             CCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT--CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             CcccCCH-----hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEecccEEeCCCCCCCCCCCCCCCccHHH
Confidence            9986421     112345678899999999999987642    22  489999998654322           2246899


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhc------ccCCCCCHHHHHHHHHHHcCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~~~l~~~  232 (262)
                      .+|.+.+.+++.++.       +++.++|+.+.+|..................      ....++.++|+++++.+++..
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          130 KTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            999999999987642       7899999999998643221111111111000      113355799999999999965


Q ss_pred             CCCce-eceEEeeCCCccc
Q 024839          233 ESAYV-SGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i-~G~~i~~dgG~~~  250 (262)
                      ..... .|+.+++.+|..+
T Consensus       203 ~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          203 ALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHCGGGCEEEECCCBSCE
T ss_pred             hccccccCceEEEeCCCCC
Confidence            42122 4789999988543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.83  E-value=2.5e-20  Score=156.03  Aligned_cols=192  Identities=12%  Similarity=0.073  Sum_probs=138.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++|||||+|+||++++++|+++  |++|++++|+.++...+..    .++.++.+|++|++++.++++       ++|+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~-------~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA----QGITVRQADYGDEAALTSALQ-------GVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc----CCCeEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            4899999999999999999998  9999999998776544332    357889999999998887765       68999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGL  167 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  167 (262)
                      ||+|+.. .                ..|+.+...+++++    ++.+ .+++|++||.... +  ....|+.+|.+.+.+
T Consensus        70 i~~a~~~-~----------------~~~~~~~~~l~~a~----~~~~-~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~~  124 (286)
T 2zcu_A           70 LLISSSE-V----------------GQRAPQHRNVINAA----KAAG-VKFIAYTSLLHAD-T--SPLGLADEHIETEKM  124 (286)
T ss_dssp             EECC-------------------------CHHHHHHHHH----HHHT-CCEEEEEEETTTT-T--CCSTTHHHHHHHHHH
T ss_pred             EEeCCCC-c----------------hHHHHHHHHHHHHH----HHcC-CCEEEEECCCCCC-C--CcchhHHHHHHHHHH
Confidence            9999852 1                02555655555544    3334 5799999998765 2  235899999999998


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh--h----hcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          168 VRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK--V----ANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       168 ~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      ++.       .|++++.++||++.++... ..   ......  .    ......+++++|+++++++++.++.  .+|+.
T Consensus       125 ~~~-------~~~~~~ilrp~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~  191 (286)
T 2zcu_A          125 LAD-------SGIVYTLLRNGWYSENYLA-SA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKV  191 (286)
T ss_dssp             HHH-------HCSEEEEEEECCBHHHHHT-TH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCE
T ss_pred             HHH-------cCCCeEEEeChHHhhhhHH-Hh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCce
Confidence            863       4899999999988765421 11   111110  0    0122457899999999999997643  37999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      ++++||..+
T Consensus       192 ~~i~~~~~~  200 (286)
T 2zcu_A          192 YELAGDSAW  200 (286)
T ss_dssp             EEECCSSCB
T ss_pred             EEEeCCCcC
Confidence            999998544

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.83  E-value=2.2e-21  Score=162.81  Aligned_cols=204  Identities=12%  Similarity=0.004  Sum_probs=146.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++++|||| +|+||++++++|.++|++|++++|+.+..        ..++.++.+|+.|.++++++++      +++|+|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~v   67 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVH------LRPEIL   67 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGG------GCCSEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhc------CCCCEE
Confidence            57899999 59999999999999999999999987652        2468899999999998887765      369999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCcc
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHA  156 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  156 (262)
                      ||+|+..          ..+....+++|+.++..+++++.    +.+ .+++|++||...+...           .....
T Consensus        68 ih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (286)
T 3gpi_A           68 VYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF  132 (286)
T ss_dssp             EECHHHH----------HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH
T ss_pred             EEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh
Confidence            9999863          23456778899999988888764    333 5799999997654322           23568


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      |+.+|.+.+.+ +..        ++++.++|+.+.+|........... ...........++.++|+++++.+++..+..
T Consensus       133 Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  203 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH  203 (286)
T ss_dssp             HHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhcc
Confidence            99999999988 542        7899999999998764311110000 0000111224467899999999999976432


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      ...|+.+++.+|..+
T Consensus       204 ~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          204 AVPERLYIVTDNQPL  218 (286)
T ss_dssp             SCCCSEEEECCSCCE
T ss_pred             CCCCceEEEeCCCCC
Confidence            345899999888643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.83  E-value=4.3e-20  Score=167.07  Aligned_cols=214  Identities=13%  Similarity=0.030  Sum_probs=154.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH---HHHHhh-----------hCCCceEEEEecCCCHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG---NQVVSS-----------IGPEKASYRHCDVRDEKQVEET   73 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~-----------~~~~~~~~~~~D~~~~~~i~~~   73 (262)
                      .|+||||||+|+||++++++|.++|++|+++.|+....   +.+.+.           ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            57899999999999999999999999999999987632   121111           11257999999999987776  


Q ss_pred             HHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc--cC--
Q 024839           74 VAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS--TV--  149 (262)
Q Consensus        74 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~--~~--  149 (262)
                            ...++|+|||+|+...        ...++.+.+++|+.++..+++++.+     . ..++|++||...  ..  
T Consensus       228 ------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEECT
T ss_pred             ------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCCcc
Confidence                  3358999999999752        1235678889999999999987754     3 579999999876  10  


Q ss_pred             --------------CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc------chHhHHHhh
Q 024839          150 --------------GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN------DVEGFVCKV  209 (262)
Q Consensus       150 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~~~~~~~  209 (262)
                                    +......|+.+|.+.+.+++.++.    .|++++.++||.+.++.......      .........
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~  363 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  363 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence                          011456899999999999988653    59999999999999886544310      011111111


Q ss_pred             hc----c------cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          210 AN----L------KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       210 ~~----~------~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ..    +      ...++.++|+|+++++++..+.   .|+++++.+|..+
T Consensus       364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            10    1      1226678999999999997654   6899999988654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.82  E-value=2.5e-20  Score=157.35  Aligned_cols=205  Identities=11%  Similarity=0.067  Sum_probs=139.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|++|||||+|+||++++++|+++| ++|++++|+.+....  +.+....+.++++|+.|++++.++++       .+|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHCCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            5799999999999999999999999 999999998765421  11112357889999999999888776       6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC--CCCCCccchhhhHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV--GGSGPHAYTISKHGL  164 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~--~~~~~~~Y~~sK~a~  164 (262)
                      |||+++....      ..       ...|+.+.    +.+++.+++.+ .++||++|+.....  +......|+.+|.++
T Consensus        76 vi~~a~~~~~------~~-------~~~~~~~~----~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~  137 (299)
T 2wm3_A           76 TFIVTNYWES------CS-------QEQEVKQG----KLLADLARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDGKGEV  137 (299)
T ss_dssp             EEECCCHHHH------TC-------HHHHHHHH----HHHHHHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHHHHHH
T ss_pred             EEEeCCCCcc------cc-------chHHHHHH----HHHHHHHHHcC-CCEEEEEcCccccccCCCcccCchhhHHHHH
Confidence            9999985311      01       22344443    44444455545 67999966544221  112246799999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--HhH--HHhh--hcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--EGF--VCKV--ANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~--~~~~--~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +.+.+.       .|++++.++||++.+++........  ...  ....  ......+++++|+++++..++.++.. ..
T Consensus       138 e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~  209 (299)
T 2wm3_A          138 EEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-YV  209 (299)
T ss_dssp             HHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-HT
T ss_pred             HHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-hC
Confidence            988864       3899999999999987643221110  000  0000  01112367999999999999975322 36


Q ss_pred             ceEEeeCCC
Q 024839          239 GHDLVVDGG  247 (262)
Q Consensus       239 G~~i~~dgG  247 (262)
                      |+.++++|.
T Consensus       210 g~~~~~~g~  218 (299)
T 2wm3_A          210 GQNIGLSTC  218 (299)
T ss_dssp             TCEEECCSE
T ss_pred             CeEEEeeec
Confidence            889999863

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.80  E-value=1.7e-18  Score=145.28  Aligned_cols=194  Identities=13%  Similarity=0.118  Sum_probs=134.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||+|+||++++++|.+. |++|+++.|+.++...+    ...++.++++|++|++++.++++       ++|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi   70 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WRGKVSVRQLDYFNQESMVEAFK-------GMDTVV   70 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----GBTTBEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            5999999999999999999998 99999999998765432    22578899999999998888776       789999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      |+++....        .       ..|+.+.    +.+++.+++.+ .++||++||......    .+|..++...    
T Consensus        71 ~~a~~~~~--------~-------~~~~~~~----~~l~~aa~~~g-v~~iv~~Ss~~~~~~----~~~~~~~~~~----  122 (289)
T 3e48_A           71 FIPSIIHP--------S-------FKRIPEV----ENLVYAAKQSG-VAHIIFIGYYADQHN----NPFHMSPYFG----  122 (289)
T ss_dssp             ECCCCCCS--------H-------HHHHHHH----HHHHHHHHHTT-CCEEEEEEESCCSTT----CCSTTHHHHH----
T ss_pred             EeCCCCcc--------c-------hhhHHHH----HHHHHHHHHcC-CCEEEEEcccCCCCC----CCCccchhHH----
Confidence            99986421        1       1244444    44555555555 679999999654322    2344443221    


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh--cccCC----CCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA--NLKGI----VLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                       .+...++..|++++.++||++.+++..    ..........  .+.+.    +++++|+|+++++++.++..+  |+.+
T Consensus       123 -~~e~~~~~~g~~~~ilrp~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~  195 (289)
T 3e48_A          123 -YASRLLSTSGIDYTYVRMAMYMDPLKP----YLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRY  195 (289)
T ss_dssp             -HHHHHHHHHCCEEEEEEECEESTTHHH----HHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEE
T ss_pred             -HHHHHHHHcCCCEEEEeccccccccHH----HHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceE
Confidence             223333446999999999999887431    1111111111  12122    679999999999999876543  8999


Q ss_pred             eeCCCccc
Q 024839          243 VVDGGFTA  250 (262)
Q Consensus       243 ~~dgG~~~  250 (262)
                      +++ |..+
T Consensus       196 ~~~-~~~~  202 (289)
T 3e48_A          196 LLS-GYSY  202 (289)
T ss_dssp             EEC-CEEE
T ss_pred             EeC-CCcC
Confidence            999 7654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.80  E-value=6.5e-19  Score=152.19  Aligned_cols=204  Identities=14%  Similarity=0.059  Sum_probs=138.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-CCCceEEEEec-CCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-GPEKASYRHCD-VRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D-~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+....  +.+ ...++.++.+| ++|++++.++++       .+
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            46889999999999999999999999999999998765421  111 11368889999 999999888776       68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC-ccCCCCCCccchhhhHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA-STVGGSGPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~~Y~~sK~a  163 (262)
                      |+||||++.. .      .         +.|..+ ..+++    .+++.+..++||++||.. ...+......|+.+|.+
T Consensus        75 d~Vi~~a~~~-~------~---------~~~~~~-~~l~~----aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~  133 (352)
T 1xgk_A           75 HLAFINTTSQ-A------G---------DEIAIG-KDLAD----AAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT  133 (352)
T ss_dssp             SEEEECCCST-T------S---------CHHHHH-HHHHH----HHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred             CEEEEcCCCC-C------c---------HHHHHH-HHHHH----HHHHcCCccEEEEeCCccccccCCCCCccHHHHHHH
Confidence            9999998753 1      0         124433 34444    333332136999999986 34444455789999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc----cc--hHhHH-Hh-h--hcccCCCCCH-HHHHHHHHHHcCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI----ND--VEGFV-CK-V--ANLKGIVLKA-KHVAEAALFLASD  232 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~--~~~~~-~~-~--~~~~~~~~~~-~~va~~~~~l~~~  232 (262)
                      .+.+++.       .|++++.++||.+.........    ..  ..... .. .  ......++++ +|+++++..++.+
T Consensus       134 ~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~  206 (352)
T 1xgk_A          134 VENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  206 (352)
T ss_dssp             HHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhC
Confidence            9999875       2899999999977543322110    00  00000 00 0  0011225678 8999999999975


Q ss_pred             CCCceeceEEeeCCC
Q 024839          233 ESAYVSGHDLVVDGG  247 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG  247 (262)
                      +.....|+.+++.++
T Consensus       207 ~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          207 GPQKWNGHRIALTFE  221 (352)
T ss_dssp             CHHHHTTCEEEECSE
T ss_pred             CchhhCCeEEEEecC
Confidence            433446899999865

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.79  E-value=1.5e-18  Score=145.25  Aligned_cols=194  Identities=8%  Similarity=-0.037  Sum_probs=137.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+++||||+ |+||++++++|.++|++|++++|+.+....+..    .++.++.+|+.+.+            ..++|+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----CCCeEEEecccccc------------cCCCCEE
Confidence            368999998 999999999999999999999999877655433    46889999999832            4579999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh--CCCCcEEEEecCCCccCCC-----------CCC
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA--NKIRGSIICTTSTASTVGG-----------SGP  154 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~~~~~ii~isS~~~~~~~-----------~~~  154 (262)
                      ||+|+.....      .  ..              .+.++..+++  .+ ..++|++||...+...           ...
T Consensus        68 i~~a~~~~~~------~--~~--------------~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           68 LISTAPDSGG------D--PV--------------LAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EECCCCBTTB------C--HH--------------HHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EECCCccccc------c--HH--------------HHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            9999975321      1  00              1234444444  33 5799999997544221           223


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhh--hcccCCCCCHHHHHHHHHHHcCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV--ANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ..|+.+|.+.+.+++.+      .|++++.++|+.+.++................  ......++.++|++++++.++..
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            57999999999998876      68999999999998875332211000000000  01224467889999999999977


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      +.   .|+.+++.+|..+
T Consensus       199 ~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          199 PD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             CC---TTCEEEECCSCCB
T ss_pred             CC---CCCEEEEeCCCCc
Confidence            65   5899999988654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.77  E-value=4.8e-18  Score=146.26  Aligned_cols=202  Identities=14%  Similarity=0.092  Sum_probs=136.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc----hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD----ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +|..+++|||||+|+||++++++|++.|++|+++.|+.    ++.+ ..+.+...++.++.+|+.|.+++.+++++.   
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALEDKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHhCCcEEEEeecCCHHHHHHHHhhC---
Confidence            35567899999999999999999999999999999976    2222 222333357899999999999998888753   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC----CCCCCcc
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV----GGSGPHA  156 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~----~~~~~~~  156 (262)
                        ++|+|||+++..                    |+.+...+++++...    +...++|+ |+.....    +......
T Consensus        83 --~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~----g~v~~~v~-S~~g~~~~e~~~~~p~~~  135 (346)
T 3i6i_A           83 --EIDIVVSTVGGE--------------------SILDQIALVKAMKAV----GTIKRFLP-SEFGHDVNRADPVEPGLN  135 (346)
T ss_dssp             --TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH----CCCSEEEC-SCCSSCTTTCCCCTTHHH
T ss_pred             --CCCEEEECCchh--------------------hHHHHHHHHHHHHHc----CCceEEee-cccCCCCCccCcCCCcch
Confidence              799999999852                    777777777766542    21346664 4332211    1234568


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-----h--HHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-----G--FVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      |+.+|.+.+.+.+.       .|+.+..++||++.+...........     .  ...........+++++|++++++.+
T Consensus       136 y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          136 MYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHH
Confidence            99999998888764       58999999999998765332211100     0  0000011123477999999999999


Q ss_pred             cCCCCCceeceEEeeCC
Q 024839          230 ASDESAYVSGHDLVVDG  246 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dg  246 (262)
                      +.++.  ..|+.+++.|
T Consensus       209 l~~~~--~~~~~~~i~g  223 (346)
T 3i6i_A          209 VDDVR--TLNKSVHFRP  223 (346)
T ss_dssp             TTCGG--GTTEEEECCC
T ss_pred             HhCcc--ccCeEEEEeC
Confidence            97653  2367777764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.76  E-value=4.7e-18  Score=143.62  Aligned_cols=195  Identities=12%  Similarity=0.097  Sum_probs=129.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-------hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-------ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++||||+|+||++++++|+++|++|+++.|+.       ++.+.+ +.+....+.++++|++|++++.++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHHh-----
Confidence            46799999999999999999999999999999986       333322 22222468899999999999888776     


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------CCCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------GGSGP  154 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------~~~~~  154 (262)
                        ++|+|||+++...                    +.+...+++++    ++.+..+++|.  |..+..      ..+..
T Consensus        76 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~~  127 (307)
T 2gas_A           76 --QVDIVICAAGRLL--------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEPVR  127 (307)
T ss_dssp             --TCSEEEECSSSSC--------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTTHH
T ss_pred             --CCCEEEECCcccc--------------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCcch
Confidence              6999999998641                    23334444443    33221356763  433321      11223


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHhH-HHhhhcccCCCCCHHHHHHHHH
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEGF-VCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      ..| .+|.+++.+.+.       .|++++.++||++.+++.......      .... ..........+++++|++++++
T Consensus       128 ~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  199 (307)
T 2gas_A          128 QVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI  199 (307)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHH
Confidence            578 999999887753       379999999999988653221110      0000 0000111234679999999999


Q ss_pred             HHcCCCCCceeceEEeeCC
Q 024839          228 FLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dg  246 (262)
                      .++.++.  ..|+.+.+.|
T Consensus       200 ~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          200 RAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHTCGG--GTTEEEECCC
T ss_pred             HHHcCcc--ccCceEEEeC
Confidence            9997653  2377787765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.76  E-value=9e-18  Score=145.77  Aligned_cols=190  Identities=17%  Similarity=0.126  Sum_probs=140.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|||||+|+||++++++|+++|+ +|+.++|+                       .++++++++++       ++|+||
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~~~~-------~~d~Vi   51 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELESALL-------KADFIV   51 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHHHHH-------HCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHHHhc-------cCCEEE
Confidence            699999999999999999999998 77766554                       77888888776       489999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHH
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLV  168 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  168 (262)
                      |+|+....         +++.+.+++|+.++..+++++.    +.+.+.++|++||.....    ...|+.+|.+.+.++
T Consensus        52 h~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A           52 HLAGVNRP---------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLL  114 (369)
T ss_dssp             ECCCSBCT---------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHH
T ss_pred             ECCcCCCC---------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHH
Confidence            99997632         1234467789999888887653    333234899999987654    568999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-hHHHhh--hcc--------cCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE-GFVCKV--ANL--------KGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       169 ~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~--~~~--------~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +.++.+.   |+++..++|+.+.++.......... ......  ..+        ...++.++|+|+++..++..+.. .
T Consensus       115 ~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~  190 (369)
T 3st7_A          115 REYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-I  190 (369)
T ss_dssp             HHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-E
T ss_pred             HHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-c
Confidence            9998884   7999999999999886543321111 111110  001        12356799999999999976543 2


Q ss_pred             eceEEeeCCCccc
Q 024839          238 SGHDLVVDGGFTA  250 (262)
Q Consensus       238 ~G~~i~~dgG~~~  250 (262)
                      .|+.+++.+|..+
T Consensus       191 ~~~~~~i~~~~~~  203 (369)
T 3st7_A          191 ENGVPTVPNVFKV  203 (369)
T ss_dssp             ETTEECCSCCEEE
T ss_pred             CCceEEeCCCCce
Confidence            4889999888554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.74  E-value=5.3e-17  Score=140.32  Aligned_cols=211  Identities=14%  Similarity=0.081  Sum_probs=142.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-----CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG-----AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....     ....++.++.+|++|++++.++++.+    .
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQCDISDPDDSQAKLSPL----T   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCEEEECCTTSHHHHHHHHTTC----T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceEEEEeecCCHHHHHHHHhcC----C
Confidence            4789999999999999999999999     99999999866532     12346889999999999888777632    2


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEE-------EecCCCccCCC----
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSII-------CTTSTASTVGG----  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii-------~isS~~~~~~~----  151 (262)
                      ++|+|||+|+...          ++..+.+++|+.++..+++++.+..  .+ ..++|       ++||...+...    
T Consensus        72 ~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~  138 (364)
T 2v6g_A           72 DVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNC--PN-LKHISLQTGRKHYMGPFESYGKIESHD  138 (364)
T ss_dssp             TCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTC--TT-CCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred             CCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhc--cc-cceEEeccCceEEEechhhccccccCC
Confidence            3999999999641          1357788999999999998776421  02 35666       67776533211    


Q ss_pred             ----------CCCccchhhhHHHHHHHHHHHHHHCCCC-cEEEEEeCCCccCCCCCCCccch-----HhHHH-hhhcc--
Q 024839          152 ----------SGPHAYTISKHGLLGLVRSAASELGKHG-IRVNCVSPFGVATPFSAGTINDV-----EGFVC-KVANL--  212 (262)
Q Consensus       152 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~i~pG~v~t~~~~~~~~~~-----~~~~~-~~~~~--  212 (262)
                                +....|    .+.+.+++.++.   .+| +++..++|+.+.+|.........     ..... ....+  
T Consensus       139 ~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~  211 (364)
T 2v6g_A          139 PPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLR  211 (364)
T ss_dssp             SSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBC
T ss_pred             CCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCcee
Confidence                      112245    234444444432   256 99999999999998654322210     11110 01111  


Q ss_pred             -c---------CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          213 -K---------GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       213 -~---------~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                       .         ....+++|++++++.++..+.  ..|+.+++.+|..
T Consensus       212 ~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~  256 (364)
T 2v6g_A          212 FTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDV  256 (364)
T ss_dssp             CCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCC
T ss_pred             cCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCc
Confidence             1         123455899999999986542  3589999988854

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.72  E-value=6.8e-18  Score=143.55  Aligned_cols=197  Identities=11%  Similarity=0.038  Sum_probs=125.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .|++|||||+|+||++++++|+++|++|+++.|+.+...+..+.+....+.++++|+.|++++.++++       .+|+|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            36799999999999999999999999999999987522222222222458899999999999888876       69999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--C---CCCccchhhhH
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--G---SGPHAYTISKH  162 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--~---~~~~~Y~~sK~  162 (262)
                      ||+++...                    +.+...+++    .+++.+..+++|+ |+......  .   +....| .+|.
T Consensus        84 i~~a~~~~--------------------~~~~~~l~~----aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           84 ISALAFPQ--------------------ILDQFKILE----AIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             EECCCGGG--------------------STTHHHHHH----HHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             EECCchhh--------------------hHHHHHHHH----HHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHH
Confidence            99998531                    223333333    3333321356763 43221111  1   112468 9999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC----CCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA----GTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +++.+.+.       .|+.+..++||.+......    ...................+++++|+++++..++.++..  .
T Consensus       138 ~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~--~  208 (318)
T 2r6j_A          138 MIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA--L  208 (318)
T ss_dssp             HHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG--T
T ss_pred             HHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc--c
Confidence            98887753       4789999999987653210    000000000000001123367899999999999976532  3


Q ss_pred             ceEEeeCC
Q 024839          239 GHDLVVDG  246 (262)
Q Consensus       239 G~~i~~dg  246 (262)
                      |+.+.+.|
T Consensus       209 ~~~~~~~g  216 (318)
T 2r6j_A          209 NRVVIYRP  216 (318)
T ss_dssp             TEEEECCC
T ss_pred             CeEEEecC
Confidence            67777765

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.72  E-value=4.5e-17  Score=137.94  Aligned_cols=200  Identities=12%  Similarity=0.093  Sum_probs=130.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-----hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-----LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++|||||+|+||++++++|+++|++|+++.|+..     +.+. .+.+...++.++++|+.|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHhCCeEEEeCCCCCHHHHHHHHh-------
Confidence            467999999999999999999999999999999842     2222 222323568899999999999888776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC------CCCCcc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG------GSGPHA  156 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~------~~~~~~  156 (262)
                      ++|+|||+++.... .               .|+.+...+++++    ++.+..+++|+ |+......      .+....
T Consensus        76 ~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~  134 (313)
T 1qyd_A           76 QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSIT  134 (313)
T ss_dssp             TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHH
T ss_pred             CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcch
Confidence            69999999987522 1               1555655555544    33321357774 43321111      122456


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-------hHhH-HHhhhcccCCCCCHHHHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-------VEGF-VCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                      | .+|.+++.+.+       ..|++++.++||++.+++.......       .... ..........+++++|+++++..
T Consensus       135 y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~  206 (313)
T 1qyd_A          135 F-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK  206 (313)
T ss_dssp             H-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHH
Confidence            8 99999988775       2489999999998866432211110       0000 00000111336789999999999


Q ss_pred             HcCCCCCceeceEEeeCC
Q 024839          229 LASDESAYVSGHDLVVDG  246 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dg  246 (262)
                      ++.++.  ..|+.+.+.|
T Consensus       207 ~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          207 SIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HTTCGG--GSSSEEECCC
T ss_pred             HHhCcc--cCCceEEEeC
Confidence            997653  2367777765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.72  E-value=7.3e-18  Score=143.49  Aligned_cols=196  Identities=10%  Similarity=0.037  Sum_probs=126.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-h----hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-E----LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ...+..+.+....+.++.+|+.|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            46799999999999999999999999999999986 1    12222222222468899999999999888876       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---C---CCCcc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---G---SGPHA  156 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---~---~~~~~  156 (262)
                      .+|+|||+++...                    +.+...+++++    ++.+..+++| . |..+...   .   +....
T Consensus        77 ~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v-~-S~~g~~~~~~~~~~p~~~~  130 (321)
T 3c1o_A           77 QVDIVISALPFPM--------------------ISSQIHIINAI----KAAGNIKRFL-P-SDFGCEEDRIKPLPPFESV  130 (321)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCCEEE-C-SCCSSCGGGCCCCHHHHHH
T ss_pred             CCCEEEECCCccc--------------------hhhHHHHHHHH----HHhCCccEEe-c-cccccCccccccCCCcchH
Confidence            6899999998641                    23333444433    3322135776 2 4333211   1   11347


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC-------CccchHhHHHhhhcccCCCCCHHHHHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG-------TINDVEGFVCKVANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  229 (262)
                      | .+|.+++.+++.       .|++++.++||.+.++....       ..................+++++|+++++..+
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (321)
T 3c1o_A          131 L-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKV  202 (321)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHH
Confidence            8 999999988863       37888999999886542110       00000000000001123467999999999999


Q ss_pred             cCCCCCceeceEEeeCC
Q 024839          230 ASDESAYVSGHDLVVDG  246 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dg  246 (262)
                      +.++.  ..|+.+.+.|
T Consensus       203 l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          203 ACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHCGG--GTTEEEECCC
T ss_pred             HhCcc--ccCeEEEEeC
Confidence            97653  2378888876

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.70  E-value=1.3e-16  Score=144.46  Aligned_cols=205  Identities=12%  Similarity=0.049  Sum_probs=137.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +++||||||+|+||++++++|+++|++|++++|+.+...            .+.+|+.+.  +       .+...++|+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~~--~-------~~~l~~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLNP--A-------SDLLDGADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTSC--C-------TTTTTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccch--h-------HHhcCCCCEE
Confidence            679999999999999999999999999999999876531            256777642  1       1223479999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCcc
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHA  156 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  156 (262)
                      ||+|+.... .   ..+.+.....+++|+.++..+++++.   ++.+ .+++|++||...+.+           ......
T Consensus       206 ih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~  277 (516)
T 3oh8_A          206 VHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDF  277 (516)
T ss_dssp             EECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSH
T ss_pred             EECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcCh
Confidence            999997522 1   34566788899999999999998643   2333 579999999765431           113346


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH-Hhh------hcccCCCCCHHHHHHHHHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV-CKV------ANLKGIVLKAKHVAEAALFL  229 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~va~~~~~l  229 (262)
                      |+.+|...+.+.+.    ....|++++.++||.+.+|.. +......... ...      ......++.++|++++++.+
T Consensus       278 y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~-~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~  352 (516)
T 3oh8_A          278 LAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRG-GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRA  352 (516)
T ss_dssp             HHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTB-SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCC-ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHH
Confidence            77777777665443    334699999999999999752 1110000000 000      00112467899999999999


Q ss_pred             cCCCCCceeceEEeeCCCcc
Q 024839          230 ASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       230 ~~~~~~~i~G~~i~~dgG~~  249 (262)
                      +....  ..| .+++.+|..
T Consensus       353 l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          353 IVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             HHCTT--CCE-EEEESCSCC
T ss_pred             HhCcc--cCC-cEEEECCCC
Confidence            97654  334 567666643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.70  E-value=4.4e-17  Score=137.74  Aligned_cols=197  Identities=16%  Similarity=0.170  Sum_probs=126.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++||||+|+||++++++|+++|++|+++.|+...     ..+..+.+....+.++++|+.|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            4679999999999999999999999999999997432     1122223333568899999999999988876       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----CCCCccc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----GSGPHAY  157 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----~~~~~~Y  157 (262)
                      ++|+|||+++...                    +.+...++++    +++.+..+++|+ |+......     .+....|
T Consensus        77 ~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y  131 (308)
T 1qyc_A           77 NVDVVISTVGSLQ--------------------IESQVNIIKA----IKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF  131 (308)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHH----HHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH
T ss_pred             CCCEEEECCcchh--------------------hhhHHHHHHH----HHhcCCCceEee-cccccCccccccCCcchhHH
Confidence            6899999998531                    2233344443    333321357763 44321211     1113468


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHh-HHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEG-FVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                       .+|.+++.+.+.       .|++++.++||++.++........      ... ...........+++++|+++++..++
T Consensus       132 -~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  203 (308)
T 1qyc_A          132 -EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  203 (308)
T ss_dssp             -HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHH
Confidence             999999888763       378899999998866432211100      000 00000011233678999999999999


Q ss_pred             CCCCCceeceEEeeCC
Q 024839          231 SDESAYVSGHDLVVDG  246 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dg  246 (262)
                      .++.  ..|+.+.+.|
T Consensus       204 ~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          204 DDPR--TLNKTLYLRL  217 (308)
T ss_dssp             SCGG--GTTEEEECCC
T ss_pred             hCcc--ccCeEEEEeC
Confidence            7643  2367777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.52  E-value=7.4e-13  Score=111.33  Aligned_cols=204  Identities=14%  Similarity=0.028  Sum_probs=126.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +||||||+|.||++++++|.++|++|+++.|++...          +   +..|     .+      ..+....+|.+||
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~-----~~------~~~~l~~~d~vih   57 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWD-----EL------AASGLPSCDAAVN   57 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHH-----HH------HHHCCCSCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecc-----hh------hHhhccCCCEEEE
Confidence            599999999999999999999999999999875421          1   1222     11      1122357999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-----------CCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-----------GPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-----------~~~~Y~  158 (262)
                      .|+.. ........+.+...+.++.|+.++..+.+++...   ......+|+.||...+.+..           ....|+
T Consensus        58 la~~~-i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~  133 (298)
T 4b4o_A           58 LAGEN-ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFS  133 (298)
T ss_dssp             CCCCC-SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHH
T ss_pred             eccCc-ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCCCCCcccccCCccccchhH
Confidence            99853 2233344677778889999999887777654321   12134577777765443221           122333


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh-------hhcccCCCCCHHHHHHHHHHHcC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK-------VANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      ..|...+.     +...+..++++..++||.+.+|-.. ...........       .......++..+|+++++.+++.
T Consensus       134 ~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~  207 (298)
T 4b4o_A          134 NLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGG-AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALE  207 (298)
T ss_dssp             HHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSH-HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCC-chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHh
Confidence            33333322     2234567999999999999887421 11000000000       00112335688999999999997


Q ss_pred             CCCCceeceEEeeCCCccc
Q 024839          232 DESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~  250 (262)
                      .+.  ..| .+++.++..+
T Consensus       208 ~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          208 ANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             CTT--CCE-EEEESCSCCC
T ss_pred             CCC--CCC-eEEEECCCcc
Confidence            653  335 7888777654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.42  E-value=1.4e-14  Score=121.46  Aligned_cols=109  Identities=15%  Similarity=0.232  Sum_probs=80.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|++|||||++|||++++..|+++|++|++++|+.++.+++.+++.. .++.++.+|++++++++++++       .
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~  188 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------G  188 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------T
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------h
Confidence            46899999999999999999999999999999999998887777665532 245678899999988877665       5


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCH-HHHHHHHHHHhhHHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDM-AQFDRTIATNLAGSV  120 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~-~~~~~~~~~nv~~~~  120 (262)
                      +|+||||++......++.+.+. ++|...+++|+.+++
T Consensus       189 ~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          189 AHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            8999999985322112212221 333445566665544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.36  E-value=1.3e-12  Score=111.46  Aligned_cols=164  Identities=12%  Similarity=0.045  Sum_probs=110.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++||||+|+||.+++..|+++|+       +|+++++..  +........+.+..+.++ .|+.+.+++.+.++    
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~----   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK----   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC----
Confidence            4799999999999999999999986       799998874  222222222322111122 46655444444433    


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc--------cC-C
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS--------TV-G  150 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~--------~~-~  150 (262)
                         ..|+|||.||....  +  ..+   ..+.++.|+.+...+++++..+   .+.+.+++++|+...        .. +
T Consensus        80 ---~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~---~~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           80 ---DADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEV---AKKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             ---TCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             ---CCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhh---cCCCeEEEEeCCchhhhHHHHHHHcCC
Confidence               68999999997532  1  233   3567899999999888877653   112468888877541        11 2


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP  193 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~  193 (262)
                      .+....|+.+|...+.+.+.++..+   |+.+..++|.++.+|
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             CChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence            3445679999999999999988875   566666666665554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.15  E-value=1.3e-10  Score=93.08  Aligned_cols=192  Identities=14%  Similarity=0.050  Sum_probs=108.7

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHH
Q 024839            5 RLQGKVAIIMGA----------------ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK   68 (262)
Q Consensus         5 ~~~~k~~lItG~----------------s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   68 (262)
                      ++.||+||||||                |++||+++|++|+++|++|+++++... +.     .. ..+  -.+|+.+.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~-~g~--~~~dv~~~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TP-PFV--KRVDVMTAL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CC-TTE--EEEECCSHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cC-CCC--eEEccCcHH
Confidence            588999999999                689999999999999999999887652 11     11 122  356887754


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHH--HHHHhhHHHHHHHHHHHHHHhCCCCcEE-EEecCC
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRT--IATNLAGSVMAVKYAARVMVANKIRGSI-ICTTST  145 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~l~~~~~~~~~~~~~~~~i-i~isS~  145 (262)
                         ++++.+.+.++++|++|||||+. ...++ +...+.+.+.  -..++.-.+....-+++.+.+....+.+ |-+.. 
T Consensus        76 ---~~~~~v~~~~~~~Dili~~Aav~-d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~VGFaa-  149 (226)
T 1u7z_A           76 ---EMEAAVNASVQQQNIFIGCAAVA-DYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAA-  149 (226)
T ss_dssp             ---HHHHHHHHHGGGCSEEEECCBCC-SEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEE-
T ss_pred             ---HHHHHHHHhcCCCCEEEECCccc-CCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEEEcch-
Confidence               45667778889999999999986 33333 2233333330  0223323333344455566543212333 22211 


Q ss_pred             CccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCC-ccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHH
Q 024839          146 ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFG-VATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAE  224 (262)
Q Consensus       146 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  224 (262)
                        +.               +.+......++.++|+.+.+..|-. ..+.+... .+............ ....+.+++|+
T Consensus       150 --Et---------------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~-~n~v~li~~~~~~~-~~~~sK~~vA~  210 (226)
T 1u7z_A          150 --ET---------------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSD-NNALHLFWQDGDKV-LPLERKELLGQ  210 (226)
T ss_dssp             --ES---------------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSS-EEEEEEEETTEEEE-EEEEEHHHHHH
T ss_pred             --hh---------------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCC-ceEEEEEeCCCcEe-cCCCCHHHHHH
Confidence              11               2356666677777888777777654 22332211 11111000000000 11357889998


Q ss_pred             HHHHHc
Q 024839          225 AALFLA  230 (262)
Q Consensus       225 ~~~~l~  230 (262)
                      .++..+
T Consensus       211 ~I~~~i  216 (226)
T 1u7z_A          211 LLLDEI  216 (226)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877655

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.03  E-value=1e-10  Score=93.90  Aligned_cols=92  Identities=7%  Similarity=0.126  Sum_probs=64.7

Q ss_pred             CCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHH
Q 024839            7 QGKVAIIMGA----------------ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV   70 (262)
Q Consensus         7 ~~k~~lItG~----------------s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i   70 (262)
                      +||+||||||                ||++|.++|++|+++|++|++++|..... .   .. ...+  -..|+.   ++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~---~~-~~~~--~~~~v~---s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P---EP-HPNL--SIREIT---NT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C---CC-CTTE--EEEECC---SH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c---cC-CCCe--EEEEHh---HH
Confidence            5899999999                78899999999999999999999875321 0   00 1123  223444   45


Q ss_pred             HHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHH
Q 024839           71 EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD  109 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~  109 (262)
                      ++.++.+.+.++++|++|+|||+. ...+....+.+++.
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvs-D~~p~~~~~~e~~~  109 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVS-DYTPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCC-SEEEEEEEEHHHHH
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccc-cccchhhcchhhhh
Confidence            667777778888999999999986 44444433444443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=2.3e-09  Score=76.96  Aligned_cols=75  Identities=20%  Similarity=0.209  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|++++.+.+.    ...+.++.+|+.+.+++.++++       ++|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   71 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKALG-------GFD   71 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHHHHc-------CCC
Confidence            4678999999 999999999999999 89999999988776654    2356788999999888777664       799


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|++++.
T Consensus        72 ~vi~~~~~   79 (118)
T 3ic5_A           72 AVISAAPF   79 (118)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999863

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=2e-08  Score=87.96  Aligned_cols=79  Identities=15%  Similarity=0.175  Sum_probs=68.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC---CeEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG---AFVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+|+ |+||+++++.|++.|   ..|++++|+.++.+++.+.+..   .++..+.+|+++.++++++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47999998 899999999999998   4899999999998888777642   35888999999999999998865     


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      ++|+|||+++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999975

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.77  E-value=2.5e-08  Score=88.42  Aligned_cols=78  Identities=18%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++.+++.+.+.  .+..+.+|+.+.+++.++++       ++|+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~--~~~~~~~Dv~d~~~l~~~l~-------~~Dv   71 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHDL   71 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT--TEEEEECCTTCHHHHHHHHT-------TSSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHc-------CCcE
Confidence            478999998 7999999999999999999999999877766554443  36788999999988877664       7999


Q ss_pred             EEeCCcCC
Q 024839           87 MYSNAGVA   94 (262)
Q Consensus        87 li~~ag~~   94 (262)
                      |||+++..
T Consensus        72 VIn~a~~~   79 (450)
T 1ff9_A           72 VISLIPYT   79 (450)
T ss_dssp             EEECCC--
T ss_pred             EEECCccc
Confidence            99999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.76  E-value=1.1e-08  Score=77.74  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=60.8

Q ss_pred             ChHHHHHHHHHHHcCCeEEEeeCCchhH------HHHHhhhCCCceEEEEecCCCH--HHHHHHHHHHHHHhCCcCEEEe
Q 024839           18 SGIGEATAKLFAEHGAFVIIADIQDELG------NQVVSSIGPEKASYRHCDVRDE--KQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        18 ~giG~~ia~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +.++.++++.|+++|++|++..|+.+..      .+..+..+ .+...+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            3578999999999999999988865432      22233333 4677889999999  9999999999998999 99999


Q ss_pred             CCcCC
Q 024839           90 NAGVA   94 (262)
Q Consensus        90 ~ag~~   94 (262)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.69  E-value=4.5e-08  Score=77.01  Aligned_cols=79  Identities=18%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||++|||.+++..+...|++|+++++++++.+.+. +++. .   ..+|..+.+..+.+.+...  ..++|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~-~---~~~d~~~~~~~~~~~~~~~--~~~~D~  110 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGV-E---YVGDSRSVDFADEILELTD--GYGVDV  110 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCC-S---EEEETTCSTHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC-C---EEeeCCcHHHHHHHHHHhC--CCCCeE
Confidence            5899999999999999999999999999999999887765543 3332 1   2347776544443333221  136999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|+|+|
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999986

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.66  E-value=4.6e-08  Score=83.33  Aligned_cols=79  Identities=22%  Similarity=0.306  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++|||||+++||.+++..+...|++|++++++.++.+.+ ++++..    ..+|.++.+++.+.+.++..  +++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  217 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD----AAFNYKTVNSLEEALKKASP--DGYDC  217 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTSCSCHHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc----EEEecCCHHHHHHHHHHHhC--CCCeE
Confidence            589999999999999999999999999999999988877666 555421    33577764445554444432  57999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1v3u_A          218 YFDNVG  223 (333)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.62  E-value=6.9e-08  Score=83.54  Aligned_cols=107  Identities=17%  Similarity=0.230  Sum_probs=75.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+++++++|+|+ |+||+++++.+...|++|++++|+.++.+.+.+.+.. .   +.+|.++.+++++++.       +.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-R---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-S---EEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-e---EEEecCCHHHHHHHHh-------CC
Confidence            367899999999 9999999999999999999999998887766554542 2   4567788877776654       58


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA  146 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~  146 (262)
                      |++|++++.....                    .+..+.+..++.|+  + .+.||++++..
T Consensus       231 DvVi~~~g~~~~~--------------------~~~li~~~~l~~mk--~-gg~iV~v~~~~  269 (369)
T 2eez_A          231 DLLIGAVLVPGAK--------------------APKLVTRDMLSLMK--E-GAVIVDVAVDQ  269 (369)
T ss_dssp             SEEEECCC---------------------------CCSCHHHHTTSC--T-TCEEEECC---
T ss_pred             CEEEECCCCCccc--------------------cchhHHHHHHHhhc--C-CCEEEEEecCC
Confidence            9999999864211                    11223455566553  2 57999998754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.62  E-value=1.3e-07  Score=84.06  Aligned_cols=79  Identities=16%  Similarity=0.202  Sum_probs=64.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+ |++|++++..|++. |++|++++|+.++.+++.+. .  .+..+.+|+.+.+++.++++       +
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~--~~~~~~~D~~d~~~l~~~l~-------~   88 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S--GSKAISLDVTDDSALDKVLA-------D   88 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G--TCEEEECCTTCHHHHHHHHH-------T
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c--CCcEEEEecCCHHHHHHHHc-------C
Confidence            567889999997 99999999999998 78999999998887776654 2  35677899999888877665       6


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      +|+|||+++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            89999999853

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.57  E-value=1e-08  Score=92.69  Aligned_cols=100  Identities=21%  Similarity=0.244  Sum_probs=67.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++.+++.+.++. ++.    ++.+   ++++      ....+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~-~~~----~~~d---l~~~------~~~~~  425 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG-KAL----SLTD---LDNY------HPEDG  425 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CE----ETTT---TTTC--------CCS
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-cee----eHHH---hhhc------cccCc
Confidence            467899999999 5999999999999999999999999888888777642 221    2222   1110      11358


Q ss_pred             CEEEeCCcCCCC----CCCcCCCCHHHHHHHHHHHhhHH
Q 024839           85 DIMYSNAGVAGP----VGTILDLDMAQFDRTIATNLAGS  119 (262)
Q Consensus        85 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~nv~~~  119 (262)
                      |++|||+|....    ..++.+.+.++|..++++|+.+.
T Consensus       426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            999999997421    13455566777788888888764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.52  E-value=6.1e-07  Score=75.59  Aligned_cols=82  Identities=23%  Similarity=0.277  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC---chhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ---DELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .++++|++||+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+++.. ....+...++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            3578999999997 7999999999999998 89999999   7777777666542 123344557777666655444   


Q ss_pred             HHhCCcCEEEeCCcC
Q 024839           79 EKYGSLDIMYSNAGV   93 (262)
Q Consensus        79 ~~~~~~d~li~~ag~   93 (262)
                          ..|+|||+...
T Consensus       226 ----~aDiIINaTp~  236 (315)
T 3tnl_A          226 ----ESVIFTNATGV  236 (315)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----CCCEEEECccC
Confidence                68999998754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.51  E-value=1.8e-07  Score=69.28  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=57.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+.+.+    .....+..|..+.+.+.++      ...+.
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~------~~~~~   71 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSL------GIRNF   71 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTT------TGGGC
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhc------CCCCC
Confidence            356788999998 999999999999999999999998766544322    2345678899887665443      12368


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|++++.
T Consensus        72 d~vi~~~~~   80 (144)
T 2hmt_A           72 EYVIVAIGA   80 (144)
T ss_dssp             SEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999998863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.50  E-value=3.9e-11  Score=106.04  Aligned_cols=44  Identities=30%  Similarity=0.464  Sum_probs=38.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV   49 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~   49 (262)
                      .+.||+++|||++ +||+++|+.|...|++|+++++++....+..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4789999999987 9999999999999999999999877655443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.49  E-value=6.1e-07  Score=66.46  Aligned_cols=75  Identities=13%  Similarity=0.109  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+++++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+.    ...++..|.++++.++++      ...+.|+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----~~~~~~gd~~~~~~l~~~------~~~~~d~   73 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----GFDAVIADPTDESFYRSL------DLEGVSA   73 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----TCEEEECCTTCHHHHHHS------CCTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----CCcEEECCCCCHHHHHhC------CcccCCE
Confidence            4578999998 7799999999999999999999998877666542    367889999998877654      1236899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+.+
T Consensus        74 vi~~~~   79 (141)
T 3llv_A           74 VLITGS   79 (141)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            998765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.49  E-value=1.9e-08  Score=84.01  Aligned_cols=78  Identities=22%  Similarity=0.255  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCC--ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+++|||++ |+|++++..|++.| +|++++|+.++.+++.+++...  ....+.+|+.+.          .+..+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5679999999997 99999999999999 9999999988877776655310  000123344441          23346


Q ss_pred             CcCEEEeCCcCC
Q 024839           83 SLDIMYSNAGVA   94 (262)
Q Consensus        83 ~~d~li~~ag~~   94 (262)
                      ++|+||||++..
T Consensus       193 ~~DilVn~ag~~  204 (287)
T 1nvt_A          193 GVDIIINATPIG  204 (287)
T ss_dssp             TCCEEEECSCTT
T ss_pred             CCCEEEECCCCC
Confidence            899999999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=4.2e-07  Score=77.86  Aligned_cols=80  Identities=25%  Similarity=0.247  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|++++||.+++..+...|++|++++|+.++.+.+ ++++..    ..+|.++.+++.+.+.++..  +++|+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~D~  241 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGE----VFIDFTKEKDIVGAVLKATD--GGAHG  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCC----EEEETTTCSCHHHHHHHHHT--SCEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCc----eEEecCccHhHHHHHHHHhC--CCCCE
Confidence            589999999999999999999999999999999988776544 344421    23487765556555555433  27999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|+++|.
T Consensus       242 vi~~~g~  248 (347)
T 2hcy_A          242 VINVSVS  248 (347)
T ss_dssp             EEECSSC
T ss_pred             EEECCCc
Confidence            9999973

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.42  E-value=3.5e-07  Score=78.19  Aligned_cols=80  Identities=16%  Similarity=0.351  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+.++++..    ..+|..+.+++.+.+.++..  +++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD----DAFNYKEESDLTAALKRCFP--NGIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS----EEEETTSCSCSHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc----eEEecCCHHHHHHHHHHHhC--CCCcE
Confidence            5899999999999999999999999999999999988776665455432    23466654444444444321  46999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|+|+|
T Consensus       229 vi~~~g  234 (345)
T 2j3h_A          229 YFENVG  234 (345)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=5.2e-07  Score=74.65  Aligned_cols=76  Identities=11%  Similarity=0.144  Sum_probs=57.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.... .....|+   +++       .+  ++.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~---~~~-------~~--~~~  181 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSM---DEL-------EG--HEF  181 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCS---GGG-------TT--CCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-CeeEecH---HHh-------cc--CCC
Confidence            567999999998 799999999999999999999999988887776654211 1112333   221       11  589


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+|||+++..
T Consensus       182 DivVn~t~~~  191 (271)
T 1nyt_A          182 DLIINATSSG  191 (271)
T ss_dssp             SEEEECCSCG
T ss_pred             CEEEECCCCC
Confidence            9999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.40  E-value=1.3e-06  Score=74.31  Aligned_cols=151  Identities=10%  Similarity=0.019  Sum_probs=96.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCC----chhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQ----DELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++++||||+|++|.+++..|+.+|.       +|+++++.    .++.+.....+.+....+ ..|+....+..+.++ 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~-   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK-   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC-
Confidence            45899999999999999999999885       79999988    544443333333211001 124333233333333 


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc--------c
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS--------T  148 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~--------~  148 (262)
                            ..|+|||.||....    ...+.+   +.+..|+.....+++.+..+   .+.++.+|++|....        .
T Consensus        83 ------~aD~Vi~~ag~~~~----~g~~r~---dl~~~N~~i~~~i~~~i~~~---~~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           83 ------DADVALLVGARPRG----PGMERK---DLLEANAQIFTVQGKAIDAV---ASRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             ------TCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSSHHHHHHHHHHT
T ss_pred             ------CCCEEEEeCCCCCC----CCCCHH---HHHHHHHHHHHHHHHHHHHh---cCCCeEEEEccCchHHHHHHHHHH
Confidence                  68999999997522    133443   45677877776666665543   112678999886331        1


Q ss_pred             C-CCCCCccchhhhHHHHHHHHHHHHHHC
Q 024839          149 V-GGSGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       149 ~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      . +.+....|+.++.--..+...++..+.
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            1 233445688887777778888888875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.39  E-value=5e-07  Score=76.66  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+.+ ++..    ..+|..+.+..+++.+...  ..++|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~--~~~~D~  212 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW----QVINYREEDLVERLKEITG--GKKVRV  212 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCccHHHHHHHHhC--CCCceE
Confidence            58999999999999999999999999999999999877665543 4421    2347666544444333221  126999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|+|+|
T Consensus       213 vi~~~g  218 (327)
T 1qor_A          213 VYDSVG  218 (327)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.38  E-value=6.8e-07  Score=76.05  Aligned_cols=80  Identities=20%  Similarity=0.239  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+. +++..    ..+|..+.+..+++.+...  ..++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~----~~~d~~~~~~~~~i~~~~~--~~~~d~  217 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCH----HTINYSTQDFAEVVREITG--GKGVDV  217 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHHHHHHHHHT--TCCEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCC----EEEECCCHHHHHHHHHHhC--CCCCeE
Confidence            5899999999999999999999999999999999987766554 34422    2347666544443333221  136999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|+|+|.
T Consensus       218 vi~~~g~  224 (333)
T 1wly_A          218 VYDSIGK  224 (333)
T ss_dssp             EEECSCT
T ss_pred             EEECCcH
Confidence            9999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.36  E-value=8.2e-07  Score=76.29  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=58.1

Q ss_pred             CC--CEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-C
Q 024839            7 QG--KVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-G   82 (262)
Q Consensus         7 ~~--k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   82 (262)
                      .|  +++||+||+++||.+++..+...|+ +|+++++++++.+.+.++++..    ..+|..+.+..+.    +.+.. +
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~----~~~~~~~  229 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD----AAINYKKDNVAEQ----LRESCPA  229 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS----EEEETTTSCHHHH----HHHHCTT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----eEEecCchHHHHH----HHHhcCC
Confidence            46  8999999999999999999999999 9999999988777666545532    2357665332222    22222 2


Q ss_pred             CcCEEEeCCc
Q 024839           83 SLDIMYSNAG   92 (262)
Q Consensus        83 ~~d~li~~ag   92 (262)
                      ++|++|+|+|
T Consensus       230 ~~d~vi~~~G  239 (357)
T 2zb4_A          230 GVDVYFDNVG  239 (357)
T ss_dssp             CEEEEEESCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.35  E-value=1.2e-06  Score=74.63  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|++|+||.+++..+...|++|+++++++++.+.+.++++..    ...|..+.+..+.+.+..   .+++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~---~~~~d~  221 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD----GAIDYKNEDLAAGLKREC---PKGIDV  221 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS----EEEETTTSCHHHHHHHHC---TTCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC----EEEECCCHHHHHHHHHhc---CCCceE
Confidence            5899999999999999999999999999999999988877765666532    234665543333322221   236999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|+|+|
T Consensus       222 vi~~~g  227 (336)
T 4b7c_A          222 FFDNVG  227 (336)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999997

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.31  E-value=1.1e-06  Score=75.35  Aligned_cols=78  Identities=17%  Similarity=0.273  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+ ++++..    ..+|..+.+..++    +.+..  .++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~~~----~~~~~~~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA----AGFNYKKEDFSEA----TLKFTKGAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS----EEEETTTSCHHHH----HHHHTTTSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc----EEEecCChHHHHH----HHHHhcCCCc
Confidence            589999999999999999999999999999999998877665 445422    2356665443333    33333  269


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.31  E-value=1.6e-06  Score=74.36  Aligned_cols=77  Identities=18%  Similarity=0.284  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+ ++++..    ..+|..+.+..++    +.+..+  ++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~----~~~d~~~~~~~~~----~~~~~~~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAH----EVFNHREVNYIDK----IKKYVGEKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTSTTHHHH----HHHHHCTTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcCCC----EEEeCCCchHHHH----HHHHcCCCCc
Confidence            589999999999999999999999999999999998877643 444422    2356666443333    333333  69


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999997

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.22  E-value=3.3e-06  Score=72.19  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~   83 (262)
                      .|+++||+|++++||.+++..+... |++|+++++++++.+.+ ++++..    ...|..+.+..++    +.+..  ++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~~~----~~~~~~~~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGAD----YVINASMQDPLAE----IRRITESKG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCS----EEEETTTSCHHHH----HHHHTTTSC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCC----EEecCCCccHHHH----HHHHhcCCC
Confidence            5899999999999999999999999 99999999988776655 344422    2246555433322    22222  47


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.21  E-value=1.1e-05  Score=60.53  Aligned_cols=78  Identities=14%  Similarity=0.125  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ..+.++|+|+ |.+|+.+++.|.+.|++|++++++. +..+.+.+... ..+.++..|.++++.++++      ...+.|
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            3567899985 9999999999999999999999974 54444443333 3477899999998776554      123689


Q ss_pred             EEEeCCc
Q 024839           86 IMYSNAG   92 (262)
Q Consensus        86 ~li~~ag   92 (262)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            9888864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.19  E-value=7.9e-06  Score=68.68  Aligned_cols=81  Identities=21%  Similarity=0.291  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC---chhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ---DELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++++|++||+|+ ||.|++++..|++.|. +|+++.|+   .++.+++.+++.. ........+..+.+.+.+.+.    
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~----  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA----  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc----
Confidence            578999999997 8999999999999998 79999999   7777777666532 122333445555433333222    


Q ss_pred             HhCCcCEEEeCCcC
Q 024839           80 KYGSLDIMYSNAGV   93 (262)
Q Consensus        80 ~~~~~d~li~~ag~   93 (262)
                         ..|+|||+...
T Consensus       220 ---~~DiIINaTp~  230 (312)
T 3t4e_A          220 ---SADILTNGTKV  230 (312)
T ss_dssp             ---HCSEEEECSST
T ss_pred             ---CceEEEECCcC
Confidence               47999998654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.17  E-value=7.2e-06  Score=70.31  Aligned_cols=79  Identities=24%  Similarity=0.305  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+.+. +++..    ...|..+.+..+.+.+ ..  .+++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~----~~~~~~~~~~~~~~~~-~~--~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAK----RGINYRSEDFAAVIKA-ET--GQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHHHHHHH-HH--SSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCC----EEEeCCchHHHHHHHH-Hh--CCCceE
Confidence            5889999999999999999999999999999999988776554 45432    2245555433333322 22  346999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|+++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999983

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.17  E-value=7.3e-06  Score=68.06  Aligned_cols=78  Identities=21%  Similarity=0.346  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..  ..+.+...+..+   +.+.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            578999999998 7999999999999998 699999999988877766642  122333444433   333333      


Q ss_pred             CCcCEEEeCCcC
Q 024839           82 GSLDIMYSNAGV   93 (262)
Q Consensus        82 ~~~d~li~~ag~   93 (262)
                       ..|+|||+...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             47999998754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.16  E-value=9.6e-05  Score=62.61  Aligned_cols=147  Identities=18%  Similarity=0.175  Sum_probs=86.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC--ceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..+++||||+|.+|..++..|+++|  .+|++++++++.  .....+.+.  ... +.. +.+..++.+.++       .
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~--~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~-------g   76 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP--GVTADISHMDTGAV-VRG-FLGQQQLEAALT-------G   76 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH--HHHHHHHTSCSSCE-EEE-EESHHHHHHHHT-------T
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH--hHHHHhhcccccce-EEE-EeCCCCHHHHcC-------C
Confidence            4579999999999999999999998  789999987662  112122211  111 111 223444544444       7


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc------------CCC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST------------VGG  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~  151 (262)
                      .|+||+.+|.....    ..+.+   +.+..|+.....+.+.+.++    ..++.++++|.....            .+.
T Consensus        77 aDvVi~~ag~~~~~----g~~r~---dl~~~N~~~~~~i~~~i~~~----~p~~~viv~SNPv~~~~~~~t~~~~~~~~~  145 (326)
T 1smk_A           77 MDLIIVPAGVPRKP----GMTRD---DLFKINAGIVKTLCEGIAKC----CPRAIVNLISNPVNSTVPIAAEVFKKAGTY  145 (326)
T ss_dssp             CSEEEECCCCCCCS----SCCCS---HHHHHHHHHHHHHHHHHHHH----CTTSEEEECCSSHHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEcCCcCCCC----CCCHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEECCchHHHHHHHHHHHHHccCC
Confidence            89999999965321    22322   44777877777777666543    224555554433222            123


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      +.....+..-.--..+...++..+.
T Consensus       146 p~~rviG~~~Ld~~r~~~~la~~l~  170 (326)
T 1smk_A          146 DPKRLLGVTMLDVVRANTFVAEVLG  170 (326)
T ss_dssp             CTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             CcccEEEEeehHHHHHHHHHHHHhC
Confidence            4445566643335556666776664

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.14  E-value=1.5e-05  Score=58.46  Aligned_cols=75  Identities=24%  Similarity=0.368  Sum_probs=56.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+..   .+.++..|..+++.+.+.      ...+.|++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~------~~~~~d~v   73 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDA------GIEDADMY   73 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHc------CcccCCEE
Confidence            467999986 99999999999999999999999887776654432   345678898887665331      12368999


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      |.+.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.06  E-value=1e-05  Score=69.03  Aligned_cols=77  Identities=17%  Similarity=0.210  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .|+++||+|++++||.+++..+...|++|+.+++++++.+.+. +++..    ..+|..+.+-    .+.+.+..  .++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~----~~~d~~~~~~----~~~~~~~~~~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGAD----ETVNYTHPDW----PKEVRRLTGGKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCS----EEEETTSTTH----HHHHHHHTTTTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCC----EEEcCCcccH----HHHHHHHhCCCCc
Confidence            5889999999999999999999999999999999988776554 44422    1247666432    22333333  369


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.06  E-value=8.2e-06  Score=69.11  Aligned_cols=78  Identities=19%  Similarity=0.272  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+.+. +++..    ...|..+.+..    +.+.+..+  ++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~----~~~~~~~~~~~----~~~~~~~~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAW----ETIDYSHEDVA----KRVLELTDGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHH----HHHHHHTTTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCC----EEEeCCCccHH----HHHHHHhCCCCc
Confidence            5899999999999999999999999999999999988776554 45422    22455553333    33333332  69


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|+++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.05  E-value=8.4e-06  Score=69.29  Aligned_cols=78  Identities=21%  Similarity=0.308  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+ ++++..    ...|..+.+..    +.+.+..  .++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~----~~~~~~~~~~~----~~~~~~~~~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYGAE----YLINASKEDIL----RQVLKFTNGKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTTSCHH----HHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCc----EEEeCCCchHH----HHHHHHhCCCCc
Confidence            589999999999999999999999999999999988877644 445422    22355543322    3333333  259


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|+++|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.04  E-value=9.3e-06  Score=69.20  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .|+++||+|++++||..++..+...|++|++++++.++.+.+.+ ++..    ...|..+.+..    +.+.+..+  ++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~----~~~~~~~~~~~----~~~~~~~~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAA----YVIDTSTAPLY----ETVMELTNGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCS----EEEETTTSCHH----HHHHHHTTTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCc----EEEeCCcccHH----HHHHHHhCCCCC
Confidence            58999999999999999999998899999999999887765543 4432    22355553322    33333332  69


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|+++|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.04  E-value=1.3e-05  Score=67.11  Aligned_cols=77  Identities=17%  Similarity=0.206  Sum_probs=57.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.+.....     ++.+.+++       .+....
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-----~~~~~~~~-------~~~~~~  204 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-----AYFSLAEA-------ETRLAE  204 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-----CEECHHHH-------HHTGGG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-----ceeeHHHH-------Hhhhcc
Confidence            578999999997 7999999999999998 899999999988888777653100     11122222       223347


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+||++.+..
T Consensus       205 aDivIn~t~~~  215 (297)
T 2egg_A          205 YDIIINTTSVG  215 (297)
T ss_dssp             CSEEEECSCTT
T ss_pred             CCEEEECCCCC
Confidence            89999999764

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.03  E-value=1.5e-05  Score=70.49  Aligned_cols=84  Identities=19%  Similarity=0.360  Sum_probs=61.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEE--ecCC---------CHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CDVR---------DEKQVEETVA   75 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~D~~---------~~~~i~~~~~   75 (262)
                      .|++|||+||+|+||.+++..+...|++|+++.++.++.+.+ ++++...+ +-.  .|+.         +.++++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLV-INRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCE-EEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEE-EecccccccccccccccccchhhhHHHH
Confidence            589999999999999999999999999999999888777655 45553221 111  1221         2355666677


Q ss_pred             HHHHHhC-CcCEEEeCCc
Q 024839           76 YAIEKYG-SLDIMYSNAG   92 (262)
Q Consensus        76 ~~~~~~~-~~d~li~~ag   92 (262)
                      .+.+..+ ++|++|+++|
T Consensus       298 ~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHSSCCSEEEECSC
T ss_pred             HHHHHhCCCceEEEECCC
Confidence            7777665 5999999987

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.02  E-value=1.7e-05  Score=59.63  Aligned_cols=78  Identities=17%  Similarity=0.228  Sum_probs=57.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +..+++++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+   ......+..|..+++.+.+.      ...+.
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~------~~~~a   85 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKEC------GMEKA   85 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTT------TGGGC
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHc------CcccC
Confidence            356788999995 999999999999999999999999877654321   12345677888886544322      12368


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|.+.+
T Consensus        86 d~Vi~~~~   93 (155)
T 2g1u_A           86 DMVFAFTN   93 (155)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEEeC
Confidence            99999875

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.01  E-value=8.6e-06  Score=67.29  Aligned_cols=75  Identities=9%  Similarity=0.179  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+.. ..+.  .+|+.   ++.       +  ++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~~---~~~-------~--~~  180 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSMD---SIP-------L--QT  180 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEGG---GCC-------C--SC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeHH---Hhc-------c--CC
Confidence            567999999998 7999999999999999999999999888887766542 1222  23331   110       0  47


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+|||+++..
T Consensus       181 ~DivIn~t~~~  191 (272)
T 1p77_A          181 YDLVINATSAG  191 (272)
T ss_dssp             CSEEEECCCC-
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.99  E-value=2.5e-05  Score=67.30  Aligned_cols=71  Identities=21%  Similarity=0.224  Sum_probs=58.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++|+|.|| |++|+.+++.|++ .++|.+++++.++++++.+     .+..+.+|+.|.+++.++++       +.|+||
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-----~~~~~~~d~~d~~~l~~~~~-------~~DvVi   82 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-----FATPLKVDASNFDKLVEVMK-------EFELVI   82 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-----TSEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-----cCCcEEEecCCHHHHHHHHh-------CCCEEE
Confidence            36999998 9999999999965 5899999999888766533     45678899999998888776       689999


Q ss_pred             eCCcC
Q 024839           89 SNAGV   93 (262)
Q Consensus        89 ~~ag~   93 (262)
                      ++++.
T Consensus        83 ~~~p~   87 (365)
T 3abi_A           83 GALPG   87 (365)
T ss_dssp             ECCCG
T ss_pred             EecCC
Confidence            99875

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.96  E-value=1.7e-05  Score=66.93  Aligned_cols=144  Identities=16%  Similarity=0.102  Sum_probs=87.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeC--CchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADI--QDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++||||+|++|.+++..|+.+|.  +++++++  +.++.+.....+.+      .++.+...|    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            699999999999999999998884  5888888  55433321111110      122222211    0112222     


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc--------cCCC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS--------TVGG  151 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~--------~~~~  151 (262)
                        ...|+|||.||....  +  ..+.   .+.+..|+.....+++++..+    . ++.++++|....        ..+.
T Consensus        73 --~gaD~Vi~~Ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           73 --DESDVVIITSGVPRK--E--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             --TTCSEEEECCSCCCC--T--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             --CCCCEEEECCCCCCC--C--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcHHHHHHHHHHhhCc
Confidence              368999999997422  1  2344   345888888877777766553    3 455555554322        1224


Q ss_pred             CCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          152 SGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       152 ~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      +....++. +..-...+...++..+.
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            45567888 66667777888888774

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.96  E-value=5.6e-05  Score=64.57  Aligned_cols=79  Identities=15%  Similarity=0.064  Sum_probs=55.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++++||+||+++||..++..+...|++|++++++.++.+.+. +++..    ...|..+.+-.+.+.+....  .++|++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~----~~~~~~~~~~~~~v~~~~~~--~g~D~v  237 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAA----HVLNEKAPDFEATLREVMKA--EQPRIF  237 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCS----EEEETTSTTHHHHHHHHHHH--HCCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCC----EEEECCcHHHHHHHHHHhcC--CCCcEE
Confidence            489999999999999999999899999999999888776554 45432    22354443333332222211  269999


Q ss_pred             EeCCcC
Q 024839           88 YSNAGV   93 (262)
Q Consensus        88 i~~ag~   93 (262)
                      |+++|.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.95  E-value=4.1e-05  Score=65.26  Aligned_cols=77  Identities=25%  Similarity=0.332  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      .|+++||+||+|+||.+++..+...|++|++++++.++.+.+. +++...  +  .|..  ++   +.+.+.+..+  ++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~--v--~~~~--~~---~~~~v~~~~~~~g~  228 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADI--V--LPLE--EG---WAKAVREATGGAGV  228 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE--E--EESS--TT---HHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE--E--ecCc--hh---HHHHHHHHhCCCCc
Confidence            5899999999999999999999999999999999888775444 454321  2  2333  22   2333444433  59


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|+++|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.90  E-value=4.9e-05  Score=65.72  Aligned_cols=78  Identities=19%  Similarity=0.240  Sum_probs=59.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+.+++++|+|+ |+||+++++.+...|++|++++++.++.+.+.+.++. .+   .++..+.+++.+++.       ..
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~-~~---~~~~~~~~~l~~~l~-------~a  232 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG-RI---HTRYSSAYELEGAVK-------RA  232 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-SS---EEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC-ee---EeccCCHHHHHHHHc-------CC
Confidence            467999999998 9999999999999999999999998887766554542 22   234455556655443       58


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+||++++..
T Consensus       233 DvVi~~~~~p  242 (377)
T 2vhw_A          233 DLVIGAVLVP  242 (377)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999998754

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.89  E-value=3e-05  Score=68.79  Aligned_cols=85  Identities=24%  Similarity=0.314  Sum_probs=63.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEE-Eec--------CCCHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR-HCD--------VRDEKQVEETVAYA   77 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~D--------~~~~~~i~~~~~~~   77 (262)
                      .|++|||+|++|+||...+..+...|++|+++.+++++.+.+ ++++...+.-. ..|        ..+.++++++.+.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            588999999999999999999988999999988887776554 45553211100 111        24667778888888


Q ss_pred             HHHhC--CcCEEEeCCc
Q 024839           78 IEKYG--SLDIMYSNAG   92 (262)
Q Consensus        78 ~~~~~--~~d~li~~ag   92 (262)
                      .+..+  ++|++|.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            87764  6999999987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.89  E-value=0.0001  Score=54.29  Aligned_cols=74  Identities=5%  Similarity=0.071  Sum_probs=58.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+.++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+    ..+.++..|.++++.++++      ...+.|.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLA------HLECAKWL   75 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHT------TGGGCSEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhc------CcccCCEE
Confidence            346888886 889999999999999999999999988776654    2466788999998766553      11257888


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      |.+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            88764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.88  E-value=3.7e-05  Score=63.37  Aligned_cols=74  Identities=16%  Similarity=0.257  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+ ||+|++++..|++.|. +|+++.|+.++.+++.+++....+...  ++.+   +.       .  ..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~---l~-------~--~~  181 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEA---LE-------G--QS  181 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGG---GT-------T--CC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHH---hc-------c--cC
Confidence            568999999997 6999999999999996 899999999998888887764223332  2222   11       0  36


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       182 ~DivInaTp~  191 (272)
T 3pwz_A          182 FDIVVNATSA  191 (272)
T ss_dssp             CSEEEECSSG
T ss_pred             CCEEEECCCC
Confidence            8999998654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.87  E-value=5.2e-05  Score=65.21  Aligned_cols=77  Identities=23%  Similarity=0.293  Sum_probs=57.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +++++++|+|+ |++|++++..+...|++|++++|+.++.+.+.+.... .+.   ++..+.+++.+.+.       ..|
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~~~~-------~~D  232 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-RVE---LLYSNSAEIETAVA-------EAD  232 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-GSE---EEECCHHHHHHHHH-------TCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-eeE---eeeCCHHHHHHHHc-------CCC
Confidence            56799999998 9999999999999999999999998887766544331 221   22234444443332       689


Q ss_pred             EEEeCCcCC
Q 024839           86 IMYSNAGVA   94 (262)
Q Consensus        86 ~li~~ag~~   94 (262)
                      ++|++++..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.87  E-value=3.3e-05  Score=66.45  Aligned_cols=75  Identities=19%  Similarity=0.309  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc---hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++|+++||+|+ |+||..++..+...|++|++++++.   ++.+ ..++++.   ..+  | .+  ++.+.+.+ . . +
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~ga---~~v--~-~~--~~~~~~~~-~-~-~  245 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEETKT---NYY--N-SS--NGYDKLKD-S-V-G  245 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHHTC---EEE--E-CT--TCSHHHHH-H-H-C
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHhCC---cee--c-hH--HHHHHHHH-h-C-C
Confidence            34999999999 9999999999999999999999987   6654 3345542   223  5 44  22222222 1 2 6


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      ++|++|+++|.
T Consensus       246 ~~d~vid~~g~  256 (366)
T 2cdc_A          246 KFDVIIDATGA  256 (366)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.84  E-value=1.8e-05  Score=66.18  Aligned_cols=89  Identities=16%  Similarity=0.176  Sum_probs=59.2

Q ss_pred             CCCCE-EEEecCCC-----------------h-HHHHHHHHHHHcCCeEEEeeCCchh--H------HHHHhhh-----C
Q 024839            6 LQGKV-AIIMGAAS-----------------G-IGEATAKLFAEHGAFVIIADIQDEL--G------NQVVSSI-----G   53 (262)
Q Consensus         6 ~~~k~-~lItG~s~-----------------g-iG~~ia~~l~~~g~~V~~~~r~~~~--~------~~~~~~~-----~   53 (262)
                      +.||+ ||||+|.+                 | .|.++|++++++|+.|+++.+...-  .      ....+.+     .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            46787 99998876                 5 9999999999999999998775321  0      0001110     0


Q ss_pred             CCceEEEEecCCCHHHHHHHHHHHH------------------------------HHhCCcCEEEeCCcCC
Q 024839           54 PEKASYRHCDVRDEKQVEETVAYAI------------------------------EKYGSLDIMYSNAGVA   94 (262)
Q Consensus        54 ~~~~~~~~~D~~~~~~i~~~~~~~~------------------------------~~~~~~d~li~~ag~~   94 (262)
                      ...+..+..|+.+.+++.+.+....                              +.+++.|++|.+|++.
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence            1234456667766666666554331                              2346799999999986

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.82  E-value=4.7e-05  Score=58.75  Aligned_cols=77  Identities=17%  Similarity=0.171  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +.+++++|.| .|.+|..+++.|.+. |++|+++++++++.+.+.+ .   .+..+..|.++++.+.++     ....+.
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~---g~~~~~gd~~~~~~l~~~-----~~~~~a  106 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E---GRNVISGDATDPDFWERI-----LDTGHV  106 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T---TCCEEECCTTCHHHHHTB-----CSCCCC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C---CCCEEEcCCCCHHHHHhc-----cCCCCC
Confidence            4567789998 599999999999999 9999999999887766543 2   355678899987655432     012368


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|.+.+
T Consensus       107 d~vi~~~~  114 (183)
T 3c85_A          107 KLVLLAMP  114 (183)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEeCC
Confidence            99998764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.79  E-value=9.6e-05  Score=62.85  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|+ ++||..++..+...|++|+.+++++++.+.+. +++..    ..+|..+.+ +.+.+.++   .+++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~----~~~d~~~~~-~~~~~~~~---~~~~d~  233 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGAD----LVVNPLKED-AAKFMKEK---VGGVHA  233 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCS----EEECTTTSC-HHHHHHHH---HSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCC----EEecCCCcc-HHHHHHHH---hCCCCE
Confidence            5889999999 78999999999999999999999988776553 45422    224666532 22222222   267999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|+++|.
T Consensus       234 vid~~g~  240 (339)
T 1rjw_A          234 AVVTAVS  240 (339)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999974

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.79  E-value=5.9e-05  Score=64.80  Aligned_cols=77  Identities=26%  Similarity=0.410  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d   85 (262)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+. +++..    ...|..+. ++.+.   +.+.. +++|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~----~~~~~~~~-~~~~~---~~~~~~~g~D  233 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCD----RPINYKTE-PVGTV---LKQEYPEGVD  233 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCS----EEEETTTS-CHHHH---HHHHCTTCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCc----EEEecCCh-hHHHH---HHHhcCCCCC
Confidence            5889999999999999999999999999999999877765544 34422    12344432 22222   22222 3699


Q ss_pred             EEEeCCc
Q 024839           86 IMYSNAG   92 (262)
Q Consensus        86 ~li~~ag   92 (262)
                      ++|+++|
T Consensus       234 ~vid~~g  240 (362)
T 2c0c_A          234 VVYESVG  240 (362)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.79  E-value=9.8e-05  Score=61.14  Aligned_cols=73  Identities=12%  Similarity=0.277  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++.. ..+.....+  +   +.          .
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~--~---l~----------~  186 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE--Q---LK----------Q  186 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--G---CC----------S
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH--H---hc----------C
Confidence            568999999997 6999999999999996 899999999988888777653 123333221  1   10          3


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      ..|+|||+...
T Consensus       187 ~aDiIInaTp~  197 (281)
T 3o8q_A          187 SYDVIINSTSA  197 (281)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEEcCcC
Confidence            68999998754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.76  E-value=7.6e-05  Score=62.38  Aligned_cols=74  Identities=19%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|++|++|..++..+...|++|+.+++++++.+.+. +++..    ...|..+.+++   .+.+    +++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~----~~~~~~~~~~~---~~~~----~~~d~  192 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAE----EAATYAEVPER---AKAW----GGLDL  192 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCS----EEEEGGGHHHH---HHHT----TSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCC----EEEECCcchhH---HHHh----cCceE
Confidence            5889999999999999999999999999999999888766553 44422    12355441222   2222    57999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|+ +|.
T Consensus       193 vid-~g~  198 (302)
T 1iz0_A          193 VLE-VRG  198 (302)
T ss_dssp             EEE-CSC
T ss_pred             EEE-CCH
Confidence            999 873

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.73  E-value=0.00015  Score=61.82  Aligned_cols=77  Identities=16%  Similarity=0.234  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-CcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-SLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~~d   85 (262)
                      .|+++||+||+|++|...+..+...|++|+.++++.++.+.+. +++...    ..|..+  +   +.+.+.+..+ .+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~----vi~~~~--~---~~~~~~~~~~~g~D  219 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADI----VLNHKE--S---LLNQFKTQGIELVD  219 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSE----EECTTS--C---HHHHHHHHTCCCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE----EEECCc--c---HHHHHHHhCCCCcc
Confidence            5899999999999999999999999999999999888765554 354321    234332  2   2233333333 699


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|+++|.
T Consensus       220 vv~d~~g~  227 (346)
T 3fbg_A          220 YVFCTFNT  227 (346)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.70  E-value=2.3e-05  Score=58.08  Aligned_cols=71  Identities=13%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +++++|.|+ |++|+.++..|.+.|++|++++|+.++.+++.++++   ....  +..+.   .++++       ..|++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~--~~~~~---~~~~~-------~~Div   84 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV--LINDI---DSLIK-------NNDVI   84 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE--ECSCH---HHHHH-------TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE--eecCH---HHHhc-------CCCEE
Confidence            789999996 999999999999999999999999998887777665   1111  23332   33333       68999


Q ss_pred             EeCCcCC
Q 024839           88 YSNAGVA   94 (262)
Q Consensus        88 i~~ag~~   94 (262)
                      |++.+..
T Consensus        85 i~at~~~   91 (144)
T 3oj0_A           85 ITATSSK   91 (144)
T ss_dssp             EECSCCS
T ss_pred             EEeCCCC
Confidence            9998753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.67  E-value=0.00016  Score=62.25  Aligned_cols=75  Identities=21%  Similarity=0.361  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|+ |+||..++..+...|++|++++++.++.+.+.++++..    ...|..+.+.+.+       ..+++|+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~----~v~~~~~~~~~~~-------~~~~~D~  254 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD----SFLVSRDQEQMQA-------AAGTLDG  254 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS----EEEETTCHHHHHH-------TTTCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc----eEEeccCHHHHHH-------hhCCCCE
Confidence            6899999996 99999999999899999999999988877666566532    2246666543332       2357999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       255 vid~~g~  261 (366)
T 1yqd_A          255 IIDTVSA  261 (366)
T ss_dssp             EEECCSS
T ss_pred             EEECCCc
Confidence            9999985

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.66  E-value=0.00014  Score=57.67  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=58.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++|+|+ |.+|..+++.|.++|++|++++++++..+++.+..   ...++..|.++++.++++      ...+.|++|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~~l~~a------~i~~ad~vi~   71 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---KATIIHGDGSHKEILRDA------EVSKNDVVVI   71 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHHHHHHH------TCCTTCEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHHHHHhc------CcccCCEEEE
Confidence            4899996 99999999999999999999999998877665443   356899999998776643      1236799887


Q ss_pred             CCc
Q 024839           90 NAG   92 (262)
Q Consensus        90 ~ag   92 (262)
                      +.+
T Consensus        72 ~~~   74 (218)
T 3l4b_C           72 LTP   74 (218)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.60  E-value=0.00095  Score=55.82  Aligned_cols=142  Identities=12%  Similarity=0.066  Sum_probs=82.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeC--CchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADI--QDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++||||+|.+|.+++..|+.+|.  +++++++  ..++++.....+.+     .++.+.. +  +.+    .       
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a-------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----D-------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----G-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----H-------
Confidence            699999999999999999998875  6888988  65544322222211     1222222 2  211    1       


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc--------cCCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS--------TVGGS  152 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~--------~~~~~  152 (262)
                      +...|+||+.||....  +  ..+..   +.+..|+.....+.+.+.    +...++.++++|....        ..+.+
T Consensus        68 ~~~aDvVi~~ag~~~~--~--g~~r~---dl~~~N~~i~~~i~~~i~----~~~p~~~viv~SNPv~~~~~~~~~~~~~p  136 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQ--P--GQTRI---DLAGDNAPIMEDIQSSLD----EHNDDYISLTTSNPVDLLNRHLYEAGDRS  136 (303)
T ss_dssp             GTTCSEEEECCCCCCC--T--TCCHH---HHHHHHHHHHHHHHHHHH----TTCSCCEEEECCSSHHHHHHHHHHHSSSC
T ss_pred             hCCCCEEEEcCCCCCC--C--CCCHH---HHHHHHHHHHHHHHHHHH----HHCCCcEEEEeCChHHHHHHHHHHHcCCC
Confidence            2368999999997422  1  33444   347778777666665544    3332445555433221        12234


Q ss_pred             CCccchh-hhHHHHHHHHHHHHHHC
Q 024839          153 GPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       153 ~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .....+. +-.-...+-..++..+.
T Consensus       137 ~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          137 REQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHHeeecccchhHHHHHHHHHHHhC
Confidence            4456666 33335666667777664

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.57  E-value=0.00014  Score=61.89  Aligned_cols=76  Identities=21%  Similarity=0.360  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+|+||..++..+...|++|+.+ ++.++.+. .++++.   ..  +| .+. ++.+.+.+... ..++|+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~lGa---~~--i~-~~~-~~~~~~~~~~~-~~g~D~  219 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDLGA---TP--ID-ASR-EPEDYAAEHTA-GQGFDL  219 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHHTS---EE--EE-TTS-CHHHHHHHHHT-TSCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHcCC---CE--ec-cCC-CHHHHHHHHhc-CCCceE
Confidence            58899999999999999999999999999988 66666544 445552   22  44 332 22222222211 126999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.++|
T Consensus       220 vid~~g  225 (343)
T 3gaz_A          220 VYDTLG  225 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.53  E-value=0.00032  Score=61.18  Aligned_cols=73  Identities=21%  Similarity=0.387  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+.++.   ..  .+.   +++.+++.       .
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~---~~--~~~---~~l~~~l~-------~  227 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---EA--VRF---DELVDHLA-------R  227 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---EE--CCG---GGHHHHHH-------T
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---ce--ecH---HhHHHHhc-------C
Confidence            467999999997 9999999999999998 899999998887666666652   11  222   23333332       6


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+||.+.+.
T Consensus       228 aDvVi~at~~  237 (404)
T 1gpj_A          228 SDVVVSATAA  237 (404)
T ss_dssp             CSEEEECCSS
T ss_pred             CCEEEEccCC
Confidence            8999999764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.50  E-value=0.00018  Score=61.27  Aligned_cols=156  Identities=16%  Similarity=0.090  Sum_probs=83.9

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |+---++++++.|+|++|.+|..+|..++.+|.  +|++++...++.+.....+.+..  +...++.-..+..+.+    
T Consensus         1 ~~~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~~al----   74 (343)
T 3fi9_A            1 MSLSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIKEAL----   74 (343)
T ss_dssp             -CCCCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHHHHH----
T ss_pred             CCccccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHHHHh----
Confidence            333345688999999999999999999999984  79999998876654333332210  0001111001122222    


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcE-EEEecCCCcc--------C
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGS-IICTTSTAST--------V  149 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~-ii~isS~~~~--------~  149 (262)
                         ..-|++|..||...  ++  ..++.   +.+..|+.-    .+.+.+.+.+...++. ++++|.....        .
T Consensus        75 ---~dADvVvitaG~p~--kp--G~~R~---dLl~~N~~I----~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~s  140 (343)
T 3fi9_A           75 ---TDAKYIVSSGGAPR--KE--GMTRE---DLLKGNAEI----AAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYS  140 (343)
T ss_dssp             ---TTEEEEEECCC-----------CHH---HHHHHHHHH----HHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHHH
T ss_pred             ---CCCCEEEEccCCCC--CC--CCCHH---HHHHHHHHH----HHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHHc
Confidence               26899999998642  21  34443   345555444    3444444444333664 6676643211        1


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      +.+.....+.+-.=-..+-..++..+.
T Consensus       141 g~p~~rv~g~t~LDs~R~~~~la~~l~  167 (343)
T 3fi9_A          141 GLKPSQVTTLAGLDSTRLQSELAKHFG  167 (343)
T ss_dssp             TCCGGGEEEECCHHHHHHHHHHHHHHT
T ss_pred             CCCcceEEEecCcHHHHHHHHHHHHhC
Confidence            223233344443333456667777764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.50  E-value=0.00038  Score=59.97  Aligned_cols=76  Identities=21%  Similarity=0.344  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+||+|+||..++..+...|++|+.+++ .++.+. .++++..    ...|..+.+-.+    ++.+ .+++|+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lGa~----~v~~~~~~~~~~----~~~~-~~g~D~  251 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLGAD----DVIDYKSGSVEE----QLKS-LKPFDF  251 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTTCS----EEEETTSSCHHH----HHHT-SCCBSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcCCC----EEEECCchHHHH----HHhh-cCCCCE
Confidence            5889999999999999999888889999988874 444433 4555532    123544432222    2222 257999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       252 vid~~g~  258 (375)
T 2vn8_A          252 ILDNVGG  258 (375)
T ss_dssp             EEESSCT
T ss_pred             EEECCCC
Confidence            9999984

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.49  E-value=4.9e-05  Score=62.82  Aligned_cols=71  Identities=14%  Similarity=0.142  Sum_probs=50.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.     +...     ..+++.+.       ...
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-----~~~~-----~~~~~~~~-------~~~  175 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-----INKI-----NLSHAESH-------LDE  175 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-----CEEE-----CHHHHHHT-------GGG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-----cccc-----cHhhHHHH-------hcC
Confidence            467899999997 7999999999999998 899999998876554321     1111     22233222       236


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       176 aDiVInaTp~  185 (277)
T 3don_A          176 FDIIINTTPA  185 (277)
T ss_dssp             CSEEEECCC-
T ss_pred             CCEEEECccC
Confidence            8999998654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.47  E-value=0.0017  Score=53.64  Aligned_cols=41  Identities=22%  Similarity=0.205  Sum_probs=35.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      +++.|.|+ |.+|.++|..|++.|++|++.+++++..+...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            67888875 889999999999999999999999887665544

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.46  E-value=0.00069  Score=56.99  Aligned_cols=143  Identities=14%  Similarity=0.145  Sum_probs=82.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC----ceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE----KASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.|+||+|.+|..++..|+..|  .+|+++++++.  +.....+.+.    ++....    ...+.++.++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            58999999999999999999988  68999999872  2233334331    111110    0122333333       6


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------------CC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------------GG  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~  151 (262)
                      .|++|+.+|.....    ..+..+   .+..|+.....+.+.+.    +...++.++++|-.....            ..
T Consensus        69 aDvVvi~ag~~~~~----g~~r~d---l~~~n~~i~~~i~~~i~----~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~  137 (314)
T 1mld_A           69 CDVVVIPAGVPRKP----GMTRDD---LFNTNATIVATLTAACA----QHCPDAMICIISNPVNSTIPITAEVFKKHGVY  137 (314)
T ss_dssp             CSEEEECCSCCCCT----TCCGGG---GHHHHHHHHHHHHHHHH----HHCTTSEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEECCCcCCCC----CCcHHH---HHHHHHHHHHHHHHHHH----hhCCCeEEEEECCCcchhHHHHHHHHHHcCCC
Confidence            89999999975321    233332   35556555444444443    323367888875543311            23


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      +.....+.+-.--..+...++..+.
T Consensus       138 p~~rvig~t~Ld~~r~~~~la~~l~  162 (314)
T 1mld_A          138 NPNKIFGVTTLDIVRANAFVAELKG  162 (314)
T ss_dssp             CTTSEEECCHHHHHHHHHHHHHHTT
T ss_pred             CcceEEEeecccHHHHHHHHHHHhC
Confidence            3445566643335555666666653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.46  E-value=0.00086  Score=57.43  Aligned_cols=81  Identities=21%  Similarity=0.264  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|+++||+|+ |++|...+..+...|++ |+.+++++++.+.+.+ + ...+..+..|-.+.+++.   +++++..+  +
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~~~~~~~~~~~~~~~~~~---~~v~~~t~g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-CPEVVTHKVERLSAEESA---KKIVESFGGIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-CTTCEEEECCSCCHHHHH---HHHHHHTSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-chhcccccccccchHHHH---HHHHHHhCCCC
Confidence            5889999998 99999999888888997 8889888887765544 4 334555556655555543   44444442  6


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.45  E-value=0.00055  Score=55.63  Aligned_cols=78  Identities=14%  Similarity=0.247  Sum_probs=54.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc-------------------hhHHHHHhhhC----CCceEEEE
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD-------------------ELGNQVVSSIG----PEKASYRH   61 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~----~~~~~~~~   61 (262)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   ++.+.+.+.+.    ..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45789999995 7999999999999996 799998876                   55555544442    23455555


Q ss_pred             ecCCCHHHHHHHHHHHHHHhCCcCEEEeCCc
Q 024839           62 CDVRDEKQVEETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        62 ~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag   92 (262)
                      .++. .+.+.++++       ..|+||.+..
T Consensus       108 ~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             SCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             ccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            5555 334444433       6899998864

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.41  E-value=0.0005  Score=56.39  Aligned_cols=65  Identities=17%  Similarity=0.194  Sum_probs=51.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|+++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. +++   +...  +..+.              ...|+|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~---~~~~--~~~~l--------------~~~DiV  176 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG---CDCF--MEPPK--------------SAFDLI  176 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT---CEEE--SSCCS--------------SCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC---CeEe--cHHHh--------------ccCCEE
Confidence            789999996 99999999999999999999999999888877 554   2222  22221              168999


Q ss_pred             EeCCcC
Q 024839           88 YSNAGV   93 (262)
Q Consensus        88 i~~ag~   93 (262)
                      ||+...
T Consensus       177 InaTp~  182 (269)
T 3phh_A          177 INATSA  182 (269)
T ss_dssp             EECCTT
T ss_pred             EEcccC
Confidence            998754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.41  E-value=0.00039  Score=59.11  Aligned_cols=77  Identities=21%  Similarity=0.261  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ + ..    ...|..+. ++.+.+.++.  ..++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~----~v~~~~~~-~~~~~~~~~~--~~g~D  233 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-AD----RLVNPLEE-DLLEVVRRVT--GSGVE  233 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CS----EEECTTTS-CHHHHHHHHH--SSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HH----hccCcCcc-CHHHHHHHhc--CCCCC
Confidence            6889999999 9999999998888999 89999998777654433 2 21    12354442 2333333332  23699


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|.++|.
T Consensus       234 ~vid~~g~  241 (343)
T 2dq4_A          234 VLLEFSGN  241 (343)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999873

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.36  E-value=0.00038  Score=59.33  Aligned_cols=77  Identities=21%  Similarity=0.302  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ ++++..    ...|..+++    +.+.+.+..+  +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~----~~~~~~~~~----~~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGAD----YVINPFEED----VVKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCS----EEECTTTSC----HHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC----EEECCCCcC----HHHHHHHHcCCCC
Confidence            6889999999 9999999999988999 899999987776544 345422    123554422    2233333332  5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       237 ~D~vid~~g~  246 (348)
T 2d8a_A          237 VDVFLEFSGA  246 (348)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.31  E-value=0.0062  Score=51.38  Aligned_cols=144  Identities=14%  Similarity=0.117  Sum_probs=83.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.+++.|+|+ |.+|.+++..|+..|.  +|+++++++++.+.....+.+      ..+.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            3578999996 9999999999999986  899999988776653333321      123332222   11          


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VG  150 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~  150 (262)
                       ....-|++|..+|...  ++  ..++.+   .+..|+.-    ++.+.+.+.+...++.++++|.....        .+
T Consensus        70 -a~~~aDvVvi~ag~p~--kp--G~~R~d---L~~~N~~I----v~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g  137 (326)
T 3pqe_A           70 -DCKDADIVCICAGANQ--KP--GETRLE---LVEKNLKI----FKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSG  137 (326)
T ss_dssp             -GGTTCSEEEECCSCCC--CT--TCCHHH---HHHHHHHH----HHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             -HhCCCCEEEEecccCC--CC--CccHHH---HHHHHHHH----HHHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcC
Confidence             1236899999998642  22  345443   35555433    34444444444436777777654321        12


Q ss_pred             CCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          151 GSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       151 ~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+.....+. +-.=-..+...++..+.
T Consensus       138 ~p~~rviG~gt~LD~~R~~~~la~~lg  164 (326)
T 3pqe_A          138 LPKERVIGSGTTLDSARFRFMLSEYFG  164 (326)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CCHHHEEeeccccHHHHHHHHHHHHhC
Confidence            233334454 33223455566666653

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.28  E-value=0.0011  Score=56.12  Aligned_cols=76  Identities=24%  Similarity=0.332  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|+ |++|...+..+...|++|+.++++.++.+.+ ++++...    ..|..+.+..    +.+.+..+++|+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~----~i~~~~~~~~----~~~~~~~g~~d~  235 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEV----AVNARDTDPA----AWLQKEIGGAHG  235 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE----EEETTTSCHH----HHHHHHHSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCE----EEeCCCcCHH----HHHHHhCCCCCE
Confidence            5889999997 8999999988888999999999988877644 4455321    2354443322    233334468999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+++
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.27  E-value=0.0008  Score=57.54  Aligned_cols=75  Identities=20%  Similarity=0.309  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+|+ |++|...+..+...|++|+.++++.++.+.+.++++...+    .|..+.+.+.       +..+++|+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v----i~~~~~~~~~-------~~~~g~D~  247 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY----VIGSDQAKMS-------ELADSLDY  247 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE----EETTCHHHHH-------HSTTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee----eccccHHHHH-------HhcCCCCE
Confidence            6889999995 9999999988888899999999988877666656653222    3444543332       22247999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       248 vid~~g~  254 (357)
T 2cf5_A          248 VIDTVPV  254 (357)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.001  Score=57.19  Aligned_cols=79  Identities=16%  Similarity=0.302  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++..    ...|..+ .+++.+.+.++..  +++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~----~vi~~~~~~~~~~~~~~~~~~--~g~  263 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGAT----DFVNPNDHSEPISQVLSKMTN--GGV  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCC----EEECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCc----eEEeccccchhHHHHHHHHhC--CCC
Confidence            5889999995 9999999988888998 799999888877654 345432    1234432 1223333333322  479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       264 D~vid~~g~  272 (374)
T 1cdo_A          264 DFSLECVGN  272 (374)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.00041  Score=58.56  Aligned_cols=75  Identities=15%  Similarity=0.169  Sum_probs=49.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++||+|++|++|...+..+...|++|+.+++++++.+.+ ++++...    ..|..+.+  .+.++++.  .+++|++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~----~i~~~~~~--~~~~~~~~--~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKE----VLAREDVM--AERIRPLD--KQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSE----EEECC-----------CC--SCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcE----EEecCCcH--HHHHHHhc--CCcccEEEE
Confidence            799999999999999998888999999999987776555 3454321    23444432  12222221  136999999


Q ss_pred             CCcC
Q 024839           90 NAGV   93 (262)
Q Consensus        90 ~ag~   93 (262)
                      ++|.
T Consensus       223 ~~g~  226 (328)
T 1xa0_A          223 PVGG  226 (328)
T ss_dssp             CSTT
T ss_pred             CCcH
Confidence            9874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.25  E-value=0.00074  Score=57.91  Aligned_cols=76  Identities=20%  Similarity=0.258  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-C-Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-G-SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~-~~   84 (262)
                      .|+++||+| +|++|...+..+...|++|+++++++++.+.+ ++++...    ..| .+.+++.+   ++.+.. + ++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~----vi~-~~~~~~~~---~v~~~~~g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADH----GIN-RLEEDWVE---RVYALTGDRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSE----EEE-TTTSCHHH---HHHHHHTTCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCE----EEc-CCcccHHH---HHHHHhCCCCc
Confidence            588999999 89999999998888999999999988877654 4455321    224 33223322   333333 2 69


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++|.++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.24  E-value=0.00054  Score=54.93  Aligned_cols=71  Identities=11%  Similarity=0.120  Sum_probs=54.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.     ..+.++..|.++++.++++      ...+.|.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKA------NVRGARAV   75 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHT------TCTTCSEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhc------CcchhcEE
Confidence            457899997 8999999999999999 999999988765543     2367889999998766553      01257888


Q ss_pred             EeCC
Q 024839           88 YSNA   91 (262)
Q Consensus        88 i~~a   91 (262)
                      |.+.
T Consensus        76 i~~~   79 (234)
T 2aef_A           76 IVDL   79 (234)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            7764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.0011  Score=56.60  Aligned_cols=81  Identities=15%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHH-HhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIE-KYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~-~~~~~   84 (262)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+.+ ++++..    ...|..+ .+..+++.+.... .-.++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~----~~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGAD----VTLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCS----EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCC----EEEcCcccccHHHHHHHHhccccCCCC
Confidence            5889999997 8999999988888999999999888776554 345432    1234443 2222222221110 01369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.20  E-value=0.00058  Score=57.88  Aligned_cols=146  Identities=12%  Similarity=0.093  Sum_probs=79.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--e-----EEEeeCCc--hhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--F-----VIIADIQD--ELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~-----V~~~~r~~--~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ++++||||+|+||.+++..|+..|.  +     ++++++.+  +..+.....+.+   .-..-+..- .+   ..+    
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~-~~---~~~----   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DK---EEI----   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SC---HHH----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEc-CC---cHH----
Confidence            5799999999999999999998875  4     89999874  233333333322   111111111 11   122    


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCc-EEEEecCCCcc-------
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRG-SIICTTSTAST-------  148 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~-~ii~isS~~~~-------  148 (262)
                         .+...|++|+.||...  .+  ..++   .+.++.|+.....+.+    .+.+...++ .++++|.....       
T Consensus        76 ---~~~daDvVvitAg~pr--kp--G~tR---~dll~~N~~i~~~i~~----~i~~~~~~~~~vivvsNPvd~~t~~~~~  141 (333)
T 5mdh_A           76 ---AFKDLDVAILVGSMPR--RD--GMER---KDLLKANVKIFKCQGA----ALDKYAKKSVKVIVVGNPANTNCLTASK  141 (333)
T ss_dssp             ---HTTTCSEEEECCSCCC--CT--TCCT---TTTHHHHHHHHHHHHH----HHHHHSCTTCEEEECSSSHHHHHHHHHH
T ss_pred             ---HhCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHH----HHHHhCCCCeEEEEcCCchHHHHHHHHH
Confidence               2236899999998642  21  2343   3445566555444444    444433356 47777653211       


Q ss_pred             -CCCCCCccc-hhhhHHHHHHHHHHHHHHC
Q 024839          149 -VGGSGPHAY-TISKHGLLGLVRSAASELG  176 (262)
Q Consensus       149 -~~~~~~~~Y-~~sK~a~~~~~~~la~e~~  176 (262)
                       .+..+.... +.+-.=-..+-..++..+.
T Consensus       142 ~~~~~p~~~ig~~t~LDs~R~~~~la~~l~  171 (333)
T 5mdh_A          142 SAPSIPKENFSCLTRLDHNRAKAQIALKLG  171 (333)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HcCCCCcCEEEEEEhHHHHHHHHHHHHHhC
Confidence             111111123 2333334556666777764

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.19  E-value=0.00068  Score=56.87  Aligned_cols=83  Identities=20%  Similarity=0.234  Sum_probs=57.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.||+++|.|++.-+|+.+|+.|...|++|.++.|+..+..+..+.+.........+..++++++.+.+.       +-
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~A  246 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DS  246 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cC
Confidence            67899999999888899999999999999999999885544333333321111111122244566666666       46


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+||...+..
T Consensus       247 DIVIsAtg~p  256 (320)
T 1edz_A          247 DVVITGVPSE  256 (320)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCCC
Confidence            9999998864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.19  E-value=0.0033  Score=53.62  Aligned_cols=78  Identities=17%  Similarity=0.267  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCC--CHHHHHHHHHHHHHHh-C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVR--DEKQVEETVAYAIEKY-G   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~-~   82 (262)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++..    ...|..  +.+++   .+++.+.. .
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~----~vi~~~~~~~~~~---~~~i~~~~~~  241 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGAD----LVLQISKESPQEI---ARKVEGQLGC  241 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCS----EEEECSSCCHHHH---HHHHHHHHTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC----EEEcCcccccchH---HHHHHHHhCC
Confidence            5889999996 8999999888888899 899999888776544 455532    123444  22332   23333322 4


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      ++|++|.++|.
T Consensus       242 g~D~vid~~g~  252 (356)
T 1pl8_A          242 KPEVTIECTGA  252 (356)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.0016  Score=55.90  Aligned_cols=74  Identities=19%  Similarity=0.365  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+|+ |++|...+..+...|++|+.+++++++.+.+. +++..    ...|..+.+.+++    +.   +++|+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~----~vi~~~~~~~~~~----~~---~g~Dv  260 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGAD----EVVNSRNADEMAA----HL---KSFDF  260 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCS----EEEETTCHHHHHT----TT---TCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCc----EEeccccHHHHHH----hh---cCCCE
Confidence            4889999997 89999999888889999999999888776554 45532    1245555543322    22   47999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       261 vid~~g~  267 (369)
T 1uuf_A          261 ILNTVAA  267 (369)
T ss_dssp             EEECCSS
T ss_pred             EEECCCC
Confidence            9999985

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.16  E-value=0.004  Score=52.50  Aligned_cols=147  Identities=13%  Similarity=0.117  Sum_probs=79.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .+..++++.|+|+ |.+|.+++..|+..|.  +++++++++++.+.....+.+.     .+... .|  +.+        
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~~--------   72 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EYS--------   72 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG--------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cHH--------
Confidence            3456789999996 9999999999999986  8999999887766544444331     22222 22  211        


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------  148 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------  148 (262)
                         ....-|++|..||...  ++  .+++   .+.++.|+.    +++.+.+.+.+...++.++++|.....        
T Consensus        73 ---a~~~aDiVvi~ag~~~--kp--G~tR---~dL~~~N~~----I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~  138 (326)
T 3vku_A           73 ---DAKDADLVVITAGAPQ--KP--GETR---LDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKL  138 (326)
T ss_dssp             ---GGTTCSEEEECCCCC---------------------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHH
T ss_pred             ---HhcCCCEEEECCCCCC--CC--CchH---HHHHHHHHH----HHHHHHHHHHhcCCceEEEEccCchHHHHHHHHHh
Confidence               1236899999998642  11  2333   234444533    344455555554446777777653321        


Q ss_pred             CCCCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          149 VGGSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       149 ~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+.+.....+. +-.--..+...++..+.
T Consensus       139 ~g~p~~rviG~gt~LD~~R~~~~la~~lg  167 (326)
T 3vku_A          139 SGFPKNRVVGSGTSLDTARFRQSIAKMVN  167 (326)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cCCCHHHeeeecccCcHHHHHHHHHHHhC
Confidence            12233334444 33333455566666653

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.16  E-value=0.0014  Score=56.48  Aligned_cols=80  Identities=15%  Similarity=0.288  Sum_probs=54.6

Q ss_pred             CCCEEEEec-CCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMG-AASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG-~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|.++||.| |+|++|...+..+...|++|+.+++++++.+.+. +++...+    .|..+.+-.+++.+....  .++|
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~----~~~~~~~~~~~v~~~t~~--~g~d  242 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHV----CNAASPTFMQDLTEALVS--TGAT  242 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCE----EETTSTTHHHHHHHHHHH--HCCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEE----EeCCChHHHHHHHHHhcC--CCce
Confidence            477899997 9999999999888888999999999888765543 4553222    344443222222222211  2699


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|.++|.
T Consensus       243 ~v~d~~g~  250 (379)
T 3iup_A          243 IAFDATGG  250 (379)
T ss_dssp             EEEESCEE
T ss_pred             EEEECCCc
Confidence            99999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.16  E-value=0.0013  Score=56.64  Aligned_cols=79  Identities=22%  Similarity=0.370  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ ++++..    ...|..+ .+++.+.+.++..  +++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~----~vi~~~~~~~~~~~~~~~~~~--~g~  262 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGAT----ECVNPQDYKKPIQEVLTEMSN--GGV  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCc----eEecccccchhHHHHHHHHhC--CCC
Confidence            5889999995 9999999998888998 799999888877654 455432    1234432 1223333332221  479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       263 D~vid~~g~  271 (374)
T 2jhf_A          263 DFSFEVIGR  271 (374)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0016  Score=55.65  Aligned_cols=76  Identities=22%  Similarity=0.382  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-C-C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-G-S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~-~   83 (262)
                      .|.++||+|+ |++|...+..+... |++|+.+++++++.+.+ ++++...    ..|..++  +.+   .+.+.. + +
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~----vi~~~~~--~~~---~v~~~~~g~g  254 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADH----VVDARRD--PVK---QVMELTRGRG  254 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSE----EEETTSC--HHH---HHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCE----EEeccch--HHH---HHHHHhCCCC
Confidence            5889999999 89999998888778 99999999988876554 3555321    2354443  222   233322 3 6


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999974

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.13  E-value=0.00082  Score=57.53  Aligned_cols=75  Identities=19%  Similarity=0.260  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|+ |++|...+..+...|++|+.+++++++.+.+. +++...  +  .|..+..+   +.+.+.   +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~--v--~~~~~~~~---~~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADH--Y--IATLEEGD---WGEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSE--E--EEGGGTSC---HHHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCE--E--EcCcCchH---HHHHhh---cCCCE
Confidence            5889999999 99999999888889999999999888776544 455321  1  24333201   122222   57999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999985

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.13  E-value=0.0018  Score=55.45  Aligned_cols=82  Identities=13%  Similarity=0.036  Sum_probs=51.7

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh---HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH--
Q 024839            7 QG-KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK--   80 (262)
Q Consensus         7 ~~-k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~--   80 (262)
                      .| .++||+||+|++|...+..+...|++|+.+.++.++   ..+..++++...+  +  |..+. .-..+.+++.+.  
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v--i--~~~~~-~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV--I--TEDQN-NSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE--E--EHHHH-HCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE--E--ecCcc-chHHHHHHHHHHhh
Confidence            47 899999999999999988887789998888766554   2233455653221  2  22110 001223333332  


Q ss_pred             --hCCcCEEEeCCcC
Q 024839           81 --YGSLDIMYSNAGV   93 (262)
Q Consensus        81 --~~~~d~li~~ag~   93 (262)
                        .+++|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence              2369999999873

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.11  E-value=0.0018  Score=55.65  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++..    ...|..+ .+++.+.+.++.  .+++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~----~vi~~~~~~~~~~~~v~~~~--~~g~  266 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGAT----DCLNPRELDKPVQDVITELT--AGGV  266 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCS----EEECGGGCSSCHHHHHHHHH--TSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCc----EEEccccccchHHHHHHHHh--CCCc
Confidence            4889999995 8999999988888898 799999888876554 455432    1234332 122333333222  1479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       267 Dvvid~~G~  275 (376)
T 1e3i_A          267 DYSLDCAGT  275 (376)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.10  E-value=0.0014  Score=56.22  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++...    ..|..+ .+++.+.+.++..  +++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~----vi~~~~~~~~~~~~v~~~~~--~g~  261 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATE----CINPQDFSKPIQEVLIEMTD--GGV  261 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSE----EECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce----EeccccccccHHHHHHHHhC--CCC
Confidence            5889999996 9999999988888898 799999888876554 3555321    134332 1223333332211  479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       262 D~vid~~g~  270 (373)
T 2fzw_A          262 DYSFECIGN  270 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCc
Confidence            999999874

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.10  E-value=0.0024  Score=55.59  Aligned_cols=46  Identities=28%  Similarity=0.338  Sum_probs=39.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      +.+++++|+|+ |.+|..+++.+...|++|++++++.+..+.+ ++++
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lG  215 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMG  215 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcC
Confidence            46899999996 8999999999999999999999998877665 3443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.07  E-value=0.00046  Score=56.94  Aligned_cols=72  Identities=17%  Similarity=0.302  Sum_probs=52.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++++++|.|+ |++|++++..|.+.|++|++++|+.++.+++.+.++   +.  ..+  +   +.+.+       ...
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g---~~--~~~--~---~~~~~-------~~a  187 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP---LE--VVN--S---PEEVI-------DKV  187 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC---EE--ECS--C---GGGTG-------GGC
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC---Ce--eeh--h---HHhhh-------cCC
Confidence            467899999996 799999999999999999999999887776655442   21  111  2   11222       258


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+||++....
T Consensus       188 DiVi~atp~~  197 (275)
T 2hk9_A          188 QVIVNTTSVG  197 (275)
T ss_dssp             SEEEECSSTT
T ss_pred             CEEEEeCCCC
Confidence            9999998653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.07  E-value=0.00081  Score=55.57  Aligned_cols=69  Identities=9%  Similarity=0.211  Sum_probs=51.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+.     .+.     .+++.       + . .
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~-----~~~-----~~~l~-------~-l-~  178 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK-----VIS-----YDELS-------N-L-K  178 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE-----EEE-----HHHHT-------T-C-C
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC-----ccc-----HHHHH-------h-c-c
Confidence            567999999997 6999999999999998 89999999988777655431     111     12221       2 2 6


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+|||+...
T Consensus       179 ~DivInaTp~  188 (282)
T 3fbt_A          179 GDVIINCTPK  188 (282)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECCcc
Confidence            8999998753

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.003  Score=54.46  Aligned_cols=78  Identities=18%  Similarity=0.180  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCC--CHHHHHHHHHHHHHHhC-
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVR--DEKQVEETVAYAIEKYG-   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~-   82 (262)
                      .|+++||+| +|++|...+..+...| ++|+.+++++++.+.+. +++...  +  .|..  +.+++   .+.+.+..+ 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~--v--i~~~~~~~~~~---~~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADL--T--LNRRETSVEER---RKAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSE--E--EETTTSCHHHH---HHHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcE--E--EeccccCcchH---HHHHHHHhCC
Confidence            488999999 8999999998888889 59999999888766544 554321  2  2433  13333   344444433 


Q ss_pred             -CcCEEEeCCcC
Q 024839           83 -SLDIMYSNAGV   93 (262)
Q Consensus        83 -~~d~li~~ag~   93 (262)
                       ++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             59999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.06  E-value=0.0013  Score=56.42  Aligned_cols=77  Identities=19%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   84 (262)
                      .|+++||+||+|++|...+..+.. .|++|+.+++++++.+.+ ++++...    ..|..+  ++   .+.+.+.. +++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~----vi~~~~--~~---~~~v~~~~~~g~  240 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHH----VIDHSK--PL---AAEVAALGLGAP  240 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSE----EECTTS--CH---HHHHHTTCSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCE----EEeCCC--CH---HHHHHHhcCCCc
Confidence            588999999999999887766655 489999999988876554 4455321    234333  22   23333322 369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       241 Dvvid~~g~  249 (363)
T 4dvj_A          241 AFVFSTTHT  249 (363)
T ss_dssp             EEEEECSCH
T ss_pred             eEEEECCCc
Confidence            999999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.05  E-value=0.0016  Score=55.31  Aligned_cols=77  Identities=12%  Similarity=0.174  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|+++||+|+ |++|...+..+...  |++|+.+++++++.+.+ ++++...+    .|..+.+   ...+++.+ -.++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v----i~~~~~~---~~~~~~~~-g~g~  239 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LELGADYV----SEMKDAE---SLINKLTD-GLGA  239 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHHTCSEE----ECHHHHH---HHHHHHHT-TCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHhCCCEE----eccccch---HHHHHhhc-CCCc
Confidence            6899999999 89999999888888  99999999988776554 34543211    2322201   12233322 1269


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       240 D~vid~~g~  248 (344)
T 2h6e_A          240 SIAIDLVGT  248 (344)
T ss_dssp             EEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999873

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.04  E-value=0.00052  Score=55.89  Aligned_cols=69  Identities=13%  Similarity=0.238  Sum_probs=49.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++ +++|.|+ ||.|++++..|.+.|. +|+++.|+.++.+++.+++.     ..  +.   +++.+.++       .
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~-----~~--~~---~~~~~~~~-------~  166 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK-----IF--SL---DQLDEVVK-------K  166 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE-----EE--EG---GGHHHHHH-------T
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc-----cC--CH---HHHHhhhc-------C
Confidence            3567 8999996 8999999999999998 89999999887665544322     12  22   22333332       6


Q ss_pred             cCEEEeCCc
Q 024839           84 LDIMYSNAG   92 (262)
Q Consensus        84 ~d~li~~ag   92 (262)
                      .|+|||+..
T Consensus       167 aDiVInatp  175 (253)
T 3u62_A          167 AKSLFNTTS  175 (253)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEECCC
Confidence            899999864

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.01  E-value=0.004  Score=51.64  Aligned_cols=87  Identities=13%  Similarity=0.217  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc------------------hhHHHHHhh---hC-CCceEEEE
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD------------------ELGNQVVSS---IG-PEKASYRH   61 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~------------------~~~~~~~~~---~~-~~~~~~~~   61 (262)
                      ++++++|+|.| .||+|.++++.|+..|. ++.+++.+.                  .+.+.+.+.   ++ ..++..+.
T Consensus        33 kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            46788999998 58999999999999994 688887654                  333333333   33 24667777


Q ss_pred             ecCCCHHHHHHHHHHHHHHh----CCcCEEEeCCc
Q 024839           62 CDVRDEKQVEETVAYAIEKY----GSLDIMYSNAG   92 (262)
Q Consensus        62 ~D~~~~~~i~~~~~~~~~~~----~~~d~li~~ag   92 (262)
                      .++.+.+.++.+++.+....    .+.|+||.+.-
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77877777776665443211    36899987653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.97  E-value=0.0012  Score=56.20  Aligned_cols=69  Identities=25%  Similarity=0.311  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|+++||+|+ |++|...+..+...|++|+.+++++++.+.+ ++++...+  +    .+.+.+.+          ++|+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v--~----~~~~~~~~----------~~D~  237 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHF--Y----TDPKQCKE----------ELDF  237 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEE--E----SSGGGCCS----------CEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCee--c----CCHHHHhc----------CCCE
Confidence            5889999997 9999999988888999999999998877654 44553322  2    33332221          7999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       238 vid~~g~  244 (348)
T 3two_A          238 IISTIPT  244 (348)
T ss_dssp             EEECCCS
T ss_pred             EEECCCc
Confidence            9999884

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.97  E-value=0.0013  Score=56.73  Aligned_cols=78  Identities=23%  Similarity=0.347  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHh-CC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKY-GS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~-~~   83 (262)
                      .|.+|||+|+ |++|...+..+...|+ +|+.+++++++.+. .++++...    ..|..+ .+++.+   .+++.. ++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~----vi~~~~~~~~~~~---~i~~~~~gg  263 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AKKFGVNE----FVNPKDHDKPIQE---VIVDLTDGG  263 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HHTTTCCE----EECGGGCSSCHHH---HHHHHTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHcCCcE----EEccccCchhHHH---HHHHhcCCC
Confidence            4889999998 9999999988888898 79999988887764 44555322    234331 122333   233322 37


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       264 ~D~vid~~g~  273 (378)
T 3uko_A          264 VDYSFECIGN  273 (378)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.96  E-value=0.0023  Score=54.98  Aligned_cols=78  Identities=22%  Similarity=0.300  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHh-CC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKY-GS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~-~~   83 (262)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++...    ..|..+ .+++.+   .+.+.. ++
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~----vi~~~~~~~~~~~---~i~~~t~gg  261 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE----CLNPKDYDKPIYE---VICEKTNGG  261 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE----EECGGGCSSCHHH---HHHHHTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcE----EEecccccchHHH---HHHHHhCCC
Confidence            4889999995 8999999888888898 799998888876554 4555321    134332 122322   233322 47


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       262 ~Dvvid~~g~  271 (373)
T 1p0f_A          262 VDYAVECAGR  271 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.94  E-value=0.0026  Score=55.33  Aligned_cols=77  Identities=22%  Similarity=0.372  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++.+. .++++..    ...|..+.+    +.+.+.+..+  +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-~~~lGa~----~vi~~~~~~----~~~~i~~~t~g~g  282 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL-AKELGAD----HVIDPTKEN----FVEAVLDYTNGLG  282 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHHTCS----EEECTTTSC----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCCC----EEEcCCCCC----HHHHHHHHhCCCC
Confidence            5889999998 8999999888888899 79988888877654 4555532    123444432    2334444433  5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.94  E-value=0.0014  Score=55.02  Aligned_cols=74  Identities=22%  Similarity=0.349  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+||+|++|...+..+...|++|+.+.+.. + .+..++++...    ..|..+.+.+.+.       ..++|+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~lGa~~----~i~~~~~~~~~~~-------~~g~D~  218 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKALGAEQ----CINYHEEDFLLAI-------STPVDA  218 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHHTCSE----EEETTTSCHHHHC-------CSCEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHcCCCE----EEeCCCcchhhhh-------ccCCCE
Confidence            588999999999999999999988999998887543 3 44555665322    2344443322221       147999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.++|.
T Consensus       219 v~d~~g~  225 (321)
T 3tqh_A          219 VIDLVGG  225 (321)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999873

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.92  E-value=0.021  Score=46.82  Aligned_cols=164  Identities=12%  Similarity=0.048  Sum_probs=93.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHH-cCCeEE-EeeCCchh--HHH-----------------HHhhhCCCceEEEEecCCCH
Q 024839            9 KVAIIMGAASGIGEATAKLFAE-HGAFVI-IADIQDEL--GNQ-----------------VVSSIGPEKASYRHCDVRDE   67 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~-~g~~V~-~~~r~~~~--~~~-----------------~~~~~~~~~~~~~~~D~~~~   67 (262)
                      .+++|+|++|.+|+.+++.+.+ .|++++ ++++..+.  ...                 +.+.+.  .+ =+..|++.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~-DvVIDft~p   82 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DF-DVFIDFTRP   82 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SC-SEEEECSCH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CC-CEEEEcCCh
Confidence            4799999999999999999875 467766 55555422  000                 011111  11 245588899


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHH----------H----hhHHHHHHHHHHHHHHhC
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIAT----------N----LAGSVMAVKYAARVMVAN  133 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~----------n----v~~~~~l~~~~~~~~~~~  133 (262)
                      +...+.+..+.+.  ++++|+-..|.          +.++..++...          |    +.-.+.+++.+.++|.. 
T Consensus        83 ~~~~~~~~~a~~~--G~~vVigTtG~----------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~-  149 (273)
T 1dih_A           83 EGTLNHLAFCRQH--GKGMVIGTTGF----------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD-  149 (273)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC----------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHHHHHHHHHhC--CCCEEEECCCC----------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC-
Confidence            9888888877765  67777766653          23333333221          1    11123344445554421 


Q ss_pred             CCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHC---------------CCCcEEEEEeCCCccCC
Q 024839          134 KIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG---------------KHGIRVNCVSPFGVATP  193 (262)
Q Consensus       134 ~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---------------~~gi~v~~i~pG~v~t~  193 (262)
                      .  -.|=.+   .......--++|+.++...+.+.+.+...+.               +.+|.+.+++-|.+-.+
T Consensus       150 ~--~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          150 Y--TDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             T--SEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             C--CCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            1  111111   1112222346789999888888766554321               35789999997777554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.91  E-value=0.013  Score=49.29  Aligned_cols=114  Identities=20%  Similarity=0.252  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCC------ceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPE------KASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |+.+++.|+| +|.+|.+++..|+..|. +|++.++++++.+.....+.+.      ...+...+  +.+    .     
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~----a-----   70 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK----D-----   70 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG----G-----
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH----H-----
Confidence            3457899999 59999999999999987 9999999987765444444321      12222111  211    1     


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                        +..-|++|..+|....  +  .+++.++   +..|+.-    .+...+.+.+...++.+++++-
T Consensus        71 --~~~aDvVIi~ag~p~k--~--G~~R~dl---~~~N~~i----~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           71 --LENSDVVIVTAGVPRK--P--GMSRDDL---LGINIKV----MQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             --GTTCSEEEECCSCCCC--T--TCCHHHH---HHHHHHH----HHHHHHHHHHHCTTCEEEECCS
T ss_pred             --HCCCCEEEEcCCcCCC--C--CCCHHHH---HHHhHHH----HHHHHHHHHHHCCCcEEEEecC
Confidence              2358999999986422  2  3555443   4445433    3444444444333677777754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.91  E-value=0.0015  Score=56.14  Aligned_cols=77  Identities=26%  Similarity=0.322  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH---H-h
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE---K-Y   81 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~---~-~   81 (262)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+ ..++++..    ...|..+.+-    .+.+.+   . .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~----~vi~~~~~~~----~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGAT----ATVDPSAGDV----VEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCS----EEECTTSSCH----HHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCC----EEECCCCcCH----HHHHHhhhhccC
Confidence            4889999998 8999999988888999 7888888877664 44555532    1235444322    222332   1 2


Q ss_pred             CCcCEEEeCCcC
Q 024839           82 GSLDIMYSNAGV   93 (262)
Q Consensus        82 ~~~d~li~~ag~   93 (262)
                      +++|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.88  E-value=0.0037  Score=53.67  Aligned_cols=78  Identities=13%  Similarity=0.085  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   84 (262)
                      ..|+++||+||+|++|...+..+...|++|+.+. +.++.+ ..++++..    ...|..+.+    +.+.+++.. +++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~----~vi~~~~~~----~~~~v~~~t~g~~  232 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAE----EVFDYRAPN----LAQTIRTYTKNNL  232 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCS----EEEETTSTT----HHHHHHHHTTTCC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCc----EEEECCCch----HHHHHHHHccCCc
Confidence            4688999999999999999999888999988876 455544 55566532    123444432    233344433 469


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.86  E-value=0.027  Score=47.25  Aligned_cols=145  Identities=14%  Similarity=0.171  Sum_probs=82.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++..++.|+|+ |.+|.+++..|+.+|  .+|+++++++++.+.....+.+      ..+.+. .|  +.+.        
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a--------   71 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD--------   71 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH--------
Confidence            34568999998 999999999999988  4899999987655432222211      122222 22  2211        


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------C
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------V  149 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~  149 (262)
                         +..-|++|..+|....  +  ..+..+   .+..|.    -+++.+.+.+.+...++.++++|-....        .
T Consensus        72 ---~~~aDvVvi~ag~~~~--~--g~~r~d---l~~~n~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~  137 (317)
T 3d0o_A           72 ---CHDADLVVICAGAAQK--P--GETRLD---LVSKNL----KIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFS  137 (317)
T ss_dssp             ---GTTCSEEEECCCCCCC--T--TCCHHH---HHHHHH----HHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHH
T ss_pred             ---hCCCCEEEECCCCCCC--C--CCcHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHh
Confidence               2368999999987422  1  345443   333443    3444455555554436777776533221        1


Q ss_pred             CCCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          150 GGSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       150 ~~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      +.+.....+. +-.-...+...++..+.
T Consensus       138 ~~p~~rviG~gt~lD~~r~~~~la~~l~  165 (317)
T 3d0o_A          138 GLPKERVIGSGTILDSARFRLLLSEAFD  165 (317)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHEEecCccccHHHHHHHHHHHhC
Confidence            2333344555 33334566666777664

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.86  E-value=0.043  Score=45.95  Aligned_cols=146  Identities=18%  Similarity=0.145  Sum_probs=81.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC--chhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ--DELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.+++  ++..+.....+.+      ........+  +.         
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~---------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY---------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG---------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH---------
Confidence            45678999996 9999999999999999 99999998  3433322222211      111111111  11         


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------  148 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------  148 (262)
                        +.+..-|++|..+|...  ++  ..++.+   .+..|+.-...    +.+.+.+...++.++++|-....        
T Consensus        74 --~a~~~aDvVIiaag~p~--kp--g~~R~d---l~~~N~~i~~~----i~~~i~~~~p~a~vlvvsNPvd~~t~~~~k~  140 (315)
T 3tl2_A           74 --ADTADSDVVVITAGIAR--KP--GMSRDD---LVATNSKIMKS----ITRDIAKHSPNAIIVVLTNPVDAMTYSVFKE  140 (315)
T ss_dssp             --GGGTTCSEEEECCSCCC--CT--TCCHHH---HHHHHHHHHHH----HHHHHHHHCTTCEEEECCSSHHHHHHHHHHH
T ss_pred             --HHhCCCCEEEEeCCCCC--CC--CCCHHH---HHHHHHHHHHH----HHHHHHHhCCCeEEEECCChHHHHHHHHHHh
Confidence              12246899999999742  22  455544   45555443333    34444333336777777753221        


Q ss_pred             CCCCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          149 VGGSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       149 ~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+.+.....+. +-.--..+...++..+.
T Consensus       141 sg~p~~rviG~gt~LD~~R~~~~la~~lg  169 (315)
T 3tl2_A          141 AGFPKERVIGQSGVLDTARFRTFIAQELN  169 (315)
T ss_dssp             HCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             cCCChHHEEeeccCcHHHHHHHHHHHHhC
Confidence            12233334455 22223455666666654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.85  E-value=0.0053  Score=51.13  Aligned_cols=73  Identities=19%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .++.+++++|.|+ |+||+++++.|...|++|++.+|+.++.+.+.+ .+   +..+  +.   +++++++       .+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g---~~~~--~~---~~l~~~l-------~~  215 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MG---LVPF--HT---DELKEHV-------KD  215 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT---CEEE--EG---GGHHHHS-------TT
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC---CeEE--ch---hhHHHHh-------hC
Confidence            3678999999995 999999999999999999999999876554432 22   2222  11   2233333       36


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      .|+||++...
T Consensus       216 aDvVi~~~p~  225 (300)
T 2rir_A          216 IDICINTIPS  225 (300)
T ss_dssp             CSEEEECCSS
T ss_pred             CCEEEECCCh
Confidence            8999998763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.80  E-value=0.0022  Score=50.41  Aligned_cols=42  Identities=14%  Similarity=0.304  Sum_probs=36.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS   51 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   51 (262)
                      +++|+||+|.+|.++++.|++.|++|++++|++++.+.+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998876665443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.79  E-value=0.017  Score=49.58  Aligned_cols=84  Identities=20%  Similarity=0.235  Sum_probs=58.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecC-----------CCHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV-----------RDEKQVEETV   74 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~i~~~~   74 (262)
                      ..+++++|+|+ |.+|..+++.+...|++|++++|+.++.+.+.+ ++   ..++..|+           ...+....-.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG---a~~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG---AQWLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT---CEECCCC-------------CHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEeccccccccccchhhhhHHHHhhhH
Confidence            46889999997 799999999999999999999999988776654 33   22332221           1111222334


Q ss_pred             HHHHHHhCCcCEEEeCCcCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~   94 (262)
                      +.+.+.....|+||.++...
T Consensus       257 ~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          257 QALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHhcCCEEEECCCCC
Confidence            44555556899999987654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.78  E-value=0.0017  Score=54.04  Aligned_cols=140  Identities=15%  Similarity=0.148  Sum_probs=81.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+++++..+.....+.+      ....+...  .|.+.    +       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~-------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----L-------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----h-------
Confidence            5889998 9999999999999997  899999998776422211111      11222212  12221    1       


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|...  ++  .+++.++   +..|    .-+++...+.+.+...++.++++|.-...        .+.+.
T Consensus        68 ~~aDiVViaag~~~--kp--G~~R~dl---~~~N----~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p~  136 (294)
T 1oju_A           68 KGSEIIVVTAGLAR--KP--GMTRLDL---AHKN----AGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPR  136 (294)
T ss_dssp             TTCSEEEECCCCCC--CS--SCCHHHH---HHHH----HHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCCT
T ss_pred             CCCCEEEECCCCCC--CC--CCcHHHH---HHHH----HHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCCH
Confidence            25799999998742  22  3555544   4444    34455566666665446777777753321        23334


Q ss_pred             Cccchhh-hHHHHHHHHHHHHHH
Q 024839          154 PHAYTIS-KHGLLGLVRSAASEL  175 (262)
Q Consensus       154 ~~~Y~~s-K~a~~~~~~~la~e~  175 (262)
                      ....+.+ -.=-..+-..++ .+
T Consensus       137 ~rviG~gt~LD~~R~~~~la-~l  158 (294)
T 1oju_A          137 NEVFGMGNQLDSQRLKERLY-NA  158 (294)
T ss_dssp             TSEEECSHHHHHHHHHHHHH-HT
T ss_pred             HHEeecccccHHHHHHHHHH-Hh
Confidence            4455552 333345555666 54

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.76  E-value=0.0051  Score=51.04  Aligned_cols=71  Identities=17%  Similarity=0.337  Sum_probs=51.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++.||+++|.| .|+||+++++.|...|++|++.+|+.++.+.+. +.+   +..+  +.   +++++++       ...
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g---~~~~--~~---~~l~~~l-------~~a  214 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIA-EMG---MEPF--HI---SKAAQEL-------RDV  214 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT---SEEE--EG---GGHHHHT-------TTC
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCC---Ceec--Ch---hhHHHHh-------cCC
Confidence            57899999999 589999999999999999999999987654433 222   2222  21   2233332       368


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+|+++..
T Consensus       215 DvVi~~~p  222 (293)
T 3d4o_A          215 DVCINTIP  222 (293)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.75  E-value=0.0045  Score=53.51  Aligned_cols=47  Identities=21%  Similarity=0.311  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++.+++++|+|+ |.+|+.++..+...|++|++++++.++.+.+.+ ++
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~G  215 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LG  215 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC
Confidence            457899999995 899999999999999999999999887665543 44

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.74  E-value=0.007  Score=51.00  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=67.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+.....+.+      ........  .|.+    .     
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----a-----   72 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----A-----   72 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----G-----
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----H-----
Confidence            45678999998 9999999999999998 999999998765433222211      11222211  1211    1     


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                        ...-|++|..+|....  +  .+++.+   .+..|+.    +.+...+.+.+...++.++++|..
T Consensus        73 --~~~aDiVIiaag~p~k--~--G~~R~d---l~~~N~~----i~~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           73 --IEGADVVIVTAGVPRK--P--GMSRDD---LLGINLK----VMEQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             --GTTCSEEEECCSCCCC---------CH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             --HCCCCEEEEccCcCCC--C--CCCHHH---HHHhhHH----HHHHHHHHHHHHCCCeEEEecCCC
Confidence              2368999999986422  1  233333   3444443    344444444443336777777754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.73  E-value=0.0032  Score=53.76  Aligned_cols=76  Identities=24%  Similarity=0.403  Sum_probs=51.6

Q ss_pred             CCCCEEEEecCCChHHHHH-HHHH-HHcCCe-EEEeeCCch---hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEAT-AKLF-AEHGAF-VIIADIQDE---LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~i-a~~l-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.++++||+|+ |++|... +..+ ...|++ |+.++++.+   +.+.+ ++++.   ..+  |..+. ++.+ +.++  
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa---~~v--~~~~~-~~~~-i~~~--  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA---TYV--DSRQT-PVED-VPDV--  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC---EEE--ETTTS-CGGG-HHHH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC---ccc--CCCcc-CHHH-HHHh--
Confidence            34489999999 9999998 6665 567987 999998877   65544 45552   223  55442 2333 3333  


Q ss_pred             HhCCcCEEEeCCcC
Q 024839           80 KYGSLDIMYSNAGV   93 (262)
Q Consensus        80 ~~~~~d~li~~ag~   93 (262)
                       .+++|++|.++|.
T Consensus       240 -~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 -YEQMDFIYEATGF  252 (357)
T ss_dssp             -SCCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             3479999999873

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.72  E-value=0.0041  Score=54.24  Aligned_cols=41  Identities=20%  Similarity=0.298  Sum_probs=35.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      ..++|.|. |.+|..+++.|.+.|+.|++++++++..+.+.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~   45 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK   45 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh
Confidence            45889996 889999999999999999999999888766543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.71  E-value=0.0029  Score=51.62  Aligned_cols=69  Identities=20%  Similarity=0.279  Sum_probs=52.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++++ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+..+.   .   .  .+.+   ++        ...
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~---~---~--~~~~---~~--------~~~  172 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL---R---A--VPLE---KA--------REA  172 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC---E---E--CCGG---GG--------GGC
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc---c---h--hhHh---hc--------cCC
Confidence            5678 8999996 7799999999999999999999998887777766652   1   1  1221   11        258


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+||++....
T Consensus       173 Divi~~tp~~  182 (263)
T 2d5c_A          173 RLLVNATRVG  182 (263)
T ss_dssp             SEEEECSSTT
T ss_pred             CEEEEccCCC
Confidence            9999998753

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.70  E-value=0.024  Score=46.64  Aligned_cols=82  Identities=7%  Similarity=-0.018  Sum_probs=58.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC---eEEEeeCCchhHHHHHhhhC------------CCceEEEEecCCCHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA---FVIIADIQDELGNQVVSSIG------------PEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~---~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~i~~   72 (262)
                      .+++.|.|+ |.+|.+++..|.+.|+   +|++.+|++++.+++.+.++            +.++.++.+   .++.+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356888886 9999999999999998   89999999988777665432            123333333   3566777


Q ss_pred             HHHHHHHH-hCCcCEEEeCCcC
Q 024839           73 TVAYAIEK-YGSLDIMYSNAGV   93 (262)
Q Consensus        73 ~~~~~~~~-~~~~d~li~~ag~   93 (262)
                      +++++... ..+=.++|++++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            78777665 4322377877653

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.65  E-value=0.0058  Score=51.40  Aligned_cols=143  Identities=14%  Similarity=0.109  Sum_probs=77.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++.|+|+ |.+|..++..|+..|.  +|++++.++++.+.....+.+.     .+.+. .  .+.+           .
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------D   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------H
Confidence            457889998 9999999999999987  8999999887665544454432     11111 1  1211           1


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGS  152 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~  152 (262)
                      +..-|++|..++...  .+  ..+..+   .+..|+.-...+.+.+.++   .. ++.++++|-..+.        .+.+
T Consensus        72 ~~~aDvVii~~g~p~--k~--g~~r~d---l~~~n~~i~~~i~~~i~~~---~p-~a~viv~tNPv~~~~~~~~k~s~~p  140 (318)
T 1y6j_A           72 VKDCDVIVVTAGANR--KP--GETRLD---LAKKNVMIAKEVTQNIMKY---YN-HGVILVVSNPVDIITYMIQKWSGLP  140 (318)
T ss_dssp             GTTCSEEEECCCC----------CHHH---HHHHHHHHHHHHHHHHHHH---CC-SCEEEECSSSHHHHHHHHHHHHTCC
T ss_pred             hCCCCEEEEcCCCCC--CC--CcCHHH---HHHhhHHHHHHHHHHHHHh---CC-CcEEEEecCcHHHHHHHHHHHcCCC
Confidence            236899999998642  11  234433   4555544444444444433   23 6677775432221        1233


Q ss_pred             CCccchh-hhHHHHHHHHHHHHHHC
Q 024839          153 GPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       153 ~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .....+. +-.-...+...++..+.
T Consensus       141 ~~rviG~gt~Ld~~r~~~~la~~lg  165 (318)
T 1y6j_A          141 VGKVIGSGTVLDSIRFRYLLSEKLG  165 (318)
T ss_dssp             TTTEEECTTHHHHHHHHHHHHTTTT
T ss_pred             HHHEeccCCchHHHHHHHHHHHHhC
Confidence            3344555 33344555566666553

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.64  E-value=0.0054  Score=52.58  Aligned_cols=77  Identities=18%  Similarity=0.259  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   84 (262)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++.+.+ ++++...  +  .|..+.+    +.+++.+.. +++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~--v--i~~~~~~----~~~~~~~~~~gg~  259 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATH--V--INSKTQD----PVAAIKEITDGGV  259 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSE--E--EETTTSC----HHHHHHHHTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCE--E--ecCCccC----HHHHHHHhcCCCC
Confidence            4889999995 8999999988877898 588898888776544 4554321  1  2433322    223333332 369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       260 D~vid~~g~  268 (371)
T 1f8f_A          260 NFALESTGS  268 (371)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999873

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.60  E-value=0.0031  Score=53.71  Aligned_cols=77  Identities=12%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++.+ ..++++..    ...|..+.+    +.+++.+..+  +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~lGa~----~vi~~~~~~----~~~~v~~~t~g~g  235 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD-IALEYGAT----DIINYKNGD----IVEQILKATDGKG  235 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH-HHHHHTCC----EEECGGGSC----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCc----eEEcCCCcC----HHHHHHHHcCCCC
Confidence            4889999985 8999999888888898 7999998877664 44455532    123433322    3334444443  5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.60  E-value=0.015  Score=45.65  Aligned_cols=76  Identities=14%  Similarity=0.103  Sum_probs=52.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .+..+++.|.| .|.+|.+++..|++.|++|++.+|+++       .+...++.++.+-   ...++++++++..... =
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~-~   83 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIMAVP---YPALAALAKQYATQLK-G   83 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT-T
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC-C
Confidence            45677899999 799999999999999999999998866       2233344444443   6677888887765544 2


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      .++|+.+.
T Consensus        84 ~~vi~~~~   91 (209)
T 2raf_A           84 KIVVDITN   91 (209)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEECC
Confidence            35666554

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.59  E-value=0.012  Score=51.85  Aligned_cols=79  Identities=24%  Similarity=0.282  Sum_probs=50.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++|+++|.|. ++.|.++|+.|.++|++|.+.++.........+.+....+.+..... . +   .+++      +.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~-~-~---~~~~------~~   72 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH-P-L---ELLD------ED   72 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCC-C-G---GGGG------SC
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCC-h-H---Hhhc------CC
Confidence            3578999999998 88999999999999999999998653211111222112344333221 1 1   1111      13


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|.||.+.|+.
T Consensus        73 ~d~vv~spgi~   83 (451)
T 3lk7_A           73 FCYMIKNPGIP   83 (451)
T ss_dssp             EEEEEECTTSC
T ss_pred             CCEEEECCcCC
Confidence            89999999975

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.59  E-value=0.0041  Score=51.10  Aligned_cols=42  Identities=31%  Similarity=0.437  Sum_probs=36.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .+++||+++|.|.++-+|+.+|..|...|++|.++.++...+
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L  197 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL  197 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            467899999999999999999999999999999998765433

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.58  E-value=0.057  Score=45.78  Aligned_cols=149  Identities=14%  Similarity=0.145  Sum_probs=81.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCch--hHHHHHhhhCC---C-ceEEEEecCCCHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDE--LGNQVVSSIGP---E-KASYRHCDVRDEKQVE   71 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~---~-~~~~~~~D~~~~~~i~   71 (262)
                      ++..-+|.|+||+|+||..++..|+....       ++++.+..+.  .++-...++.+   . .......+  +.   .
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---R   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---H
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---H
Confidence            34556899999999999999999987642       6888888753  22322223322   1 11222221  22   2


Q ss_pred             HHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEecCCCc---
Q 024839           72 ETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTTSTAS---  147 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~isS~~~---  147 (262)
                      +       .+..-|++|-.||...  ++  .++++++   ++.|.    .+++...+.+.+ ......++.+|....   
T Consensus        96 ~-------a~~~advVvi~aG~pr--kp--GmtR~DL---l~~Na----~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~  157 (345)
T 4h7p_A           96 V-------AFDGVAIAIMCGAFPR--KA--GMERKDL---LEMNA----RIFKEQGEAIAAVAASDCRVVVVGNPANTNA  157 (345)
T ss_dssp             H-------HTTTCSEEEECCCCCC--CT--TCCHHHH---HHHHH----HHHHHHHHHHHHHSCTTCEEEECSSSHHHHH
T ss_pred             H-------HhCCCCEEEECCCCCC--CC--CCCHHHH---HHHhH----HHHHHHHHHHHhhccCceEEEEeCCCcchHH
Confidence            2       2336899999999742  22  5677665   45553    344555555544 221345555554321   


Q ss_pred             ----c-C-CC-CCCccchhhhHHHHHHHHHHHHHHC
Q 024839          148 ----T-V-GG-SGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       148 ----~-~-~~-~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                          . . +. +.....+.+..=-..+-..++..+.
T Consensus       158 ~i~~~~~~g~~~~r~i~~~t~LDs~R~~~~la~~~~  193 (345)
T 4h7p_A          158 LILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAG  193 (345)
T ss_dssp             HHHHHHTTTCSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCCCCcceeeeccchhHHHHHHHHHHHHC
Confidence                0 1 11 1223344455545556666777764

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.58  E-value=0.0022  Score=54.28  Aligned_cols=146  Identities=10%  Similarity=0.081  Sum_probs=84.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .+.+++.|+|+ |.+|.+++..|+..|.  +|+++++++++.+.....+.+.     ....+..  .|.++         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~---------   84 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV---------   84 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH---------
Confidence            45778999997 9999999999999986  7999999987666544444321     1112222  12211         


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VG  150 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~  150 (262)
                        ...-|++|..||...  +  ..+++.+   .++.|..    +++.+.+.+.+...++.++++|.....        .+
T Consensus        85 --~~~aDiVvi~aG~~~--k--pG~tR~d---L~~~N~~----I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~~k~sg  151 (331)
T 4aj2_A           85 --TANSKLVIITAGARQ--Q--EGESRLN---LVQRNVN----IFKFIIPNVVKYSPQCKLLIVSNPVDILTYVAWKISG  151 (331)
T ss_dssp             --GTTEEEEEECCSCCC--C--TTCCGGG---GHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHC
T ss_pred             --hCCCCEEEEccCCCC--C--CCccHHH---HHHHHHH----HHHHHHHHHHHHCCCeEEEEecChHHHHHHHHHHHhC
Confidence              236899999999742  2  2455433   4444543    333344444443336788887754321        12


Q ss_pred             CCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          151 GSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       151 ~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+.....+. +-.=...+...++..+.
T Consensus       152 ~p~~rviG~gt~LD~~R~~~~la~~lg  178 (331)
T 4aj2_A          152 FPKNRVIGSGCNLDSARFRYLMGERLG  178 (331)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CCHHHEEeeccccHHHHHHHHHHHHhC
Confidence            222334444 22223455556666653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.56  E-value=0.0091  Score=49.62  Aligned_cols=80  Identities=14%  Similarity=0.055  Sum_probs=52.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+++.|.||.|.+|.+++..|.+.|++|++++|+++..  ..+.+...++.++.+-...   +.++++++.....+=-+|
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~~aDvVilavp~~~---~~~vl~~l~~~l~~~~iv   95 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILANADVVIVSVPINL---TLETIERLKPYLTENMLL   95 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHTTCSEEEECSCGGG---HHHHHHHHGGGCCTTSEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhcCCCEEEEeCCHHH---HHHHHHHHHhhcCCCcEE
Confidence            45799999999999999999999999999999886531  2223334456666554333   566666664433222244


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      +..++
T Consensus        96 ~~~~s  100 (298)
T 2pv7_A           96 ADLTS  100 (298)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            54443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.55  E-value=0.011  Score=47.62  Aligned_cols=77  Identities=10%  Similarity=0.127  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +++|.|++|.+|+.+++.+.+. +++++.+....+.++++... .   . -+..|+++++...+.+..+.+.  ++++|+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~-~---~-DvvIDfT~p~a~~~~~~~a~~~--g~~~Vi   74 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDG-N---T-EVVIDFTHPDVVMGNLEFLIDN--GIHAVV   74 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHT-T---C-CEEEECSCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhcc-C---C-cEEEEccChHHHHHHHHHHHHc--CCCEEE
Confidence            5899999999999999999865 88887554444444444331 1   1 1778999999988888877665  688888


Q ss_pred             eCCcC
Q 024839           89 SNAGV   93 (262)
Q Consensus        89 ~~ag~   93 (262)
                      -..|.
T Consensus        75 gTTG~   79 (245)
T 1p9l_A           75 GTTGF   79 (245)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            77763

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.54  E-value=0.013  Score=49.69  Aligned_cols=76  Identities=20%  Similarity=0.348  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.++||+|+ |++|...+..+... |.+|+.+++++++.+.+ ++++...+    .|..+ +    +.+++.+..+  +
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~~----i~~~~-~----~~~~v~~~t~g~g  239 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADAA----VKSGA-G----AADAIRELTGGQG  239 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSEE----EECST-T----HHHHHHHHHGGGC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEE----EcCCC-c----HHHHHHHHhCCCC
Confidence            5889999998 99999888777666 78899999998877644 45553221    22222 2    2233333332  6


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       240 ~d~v~d~~G~  249 (345)
T 3jv7_A          240 ATAVFDFVGA  249 (345)
T ss_dssp             EEEEEESSCC
T ss_pred             CeEEEECCCC
Confidence            9999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.54  E-value=0.0079  Score=48.75  Aligned_cols=78  Identities=18%  Similarity=0.296  Sum_probs=50.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc-------------------hhHHHHHhhh---C-CCceEEEE
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD-------------------ELGNQVVSSI---G-PEKASYRH   61 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~---~-~~~~~~~~   61 (262)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++++..                   .+.+.+.+.+   . ..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45789999996 7799999999999996 678875432                   3333333333   2 23444554


Q ss_pred             ecCCCHHHHHHHHHHHHHHhCCcCEEEeCCc
Q 024839           62 CDVRDEKQVEETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        62 ~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag   92 (262)
                      .++. .+.+.++++       ..|+||.+..
T Consensus       105 ~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             SCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             ccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            4443 344444444       4799998753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.51  E-value=0.0044  Score=54.88  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=57.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ..+++|.|+ |.+|+.+|+.|.++|++|++++++++..+.+.+.++   +.++..|.++++-++++=-      .+-|.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~---~~~i~Gd~~~~~~L~~Agi------~~ad~~   72 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD---LRVVNGHASHPDVLHEAGA------QDADML   72 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS---CEEEESCTTCHHHHHHHTT------TTCSEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC---cEEEEEcCCCHHHHHhcCC------CcCCEE
Confidence            346888885 799999999999999999999999998887776653   6778899999877765411      256777


Q ss_pred             EeCC
Q 024839           88 YSNA   91 (262)
Q Consensus        88 i~~a   91 (262)
                      |...
T Consensus        73 ia~t   76 (461)
T 4g65_A           73 VAVT   76 (461)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            7543

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.49  E-value=0.014  Score=50.41  Aligned_cols=74  Identities=19%  Similarity=0.188  Sum_probs=52.9

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+.+-+.+|+++|.|++ .+|+.+++.+.+.|++|++++........   .+  . -..+..|..|.+.+.++++     
T Consensus         7 m~~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~~---~~--a-d~~~~~~~~d~~~l~~~~~-----   74 (389)
T 3q2o_A            7 MTRIILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPCA---QV--A-DIEIVASYDDLKAIQHLAE-----   74 (389)
T ss_dssp             CCCCCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTTT---TT--C-SEEEECCTTCHHHHHHHHH-----
T ss_pred             ccccCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCchH---Hh--C-CceEecCcCCHHHHHHHHH-----
Confidence            34445789999999955 59999999999999999999876432211   11  1 1245678888888877775     


Q ss_pred             hCCcCEEE
Q 024839           81 YGSLDIMY   88 (262)
Q Consensus        81 ~~~~d~li   88 (262)
                        +.|++.
T Consensus        75 --~~dvI~   80 (389)
T 3q2o_A           75 --ISDVVT   80 (389)
T ss_dssp             --TCSEEE
T ss_pred             --hCCEee
Confidence              468764

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.47  E-value=0.012  Score=50.54  Aligned_cols=71  Identities=17%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..+.+|+++|.| +|.+|+.+++.+.+.|++|++++........   .+.   -..+..|..|.+.+.++++       +
T Consensus         8 ~~~~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~---~~a---d~~~~~~~~d~~~l~~~~~-------~   73 (377)
T 3orq_A            8 KLKFGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCR---YVA---HEFIQAKYDDEKALNQLGQ-------K   73 (377)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTG---GGS---SEEEECCTTCHHHHHHHHH-------H
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhh---hhC---CEEEECCCCCHHHHHHHHH-------h
Confidence            346799999998 5679999999999999999999876542211   111   1356788999888877775       3


Q ss_pred             cCEEE
Q 024839           84 LDIMY   88 (262)
Q Consensus        84 ~d~li   88 (262)
                      +|+++
T Consensus        74 ~dvi~   78 (377)
T 3orq_A           74 CDVIT   78 (377)
T ss_dssp             CSEEE
T ss_pred             CCcce
Confidence            68763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.46  E-value=0.041  Score=46.36  Aligned_cols=145  Identities=13%  Similarity=0.138  Sum_probs=83.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      -+.+++.|+|+ |.+|.+++..|+..+.  ++++.++++++++.....+.+.     .+.+. .|  +.+.    +    
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a----~----   74 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD----A----   74 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG----G----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH----h----
Confidence            34568999998 9999999999998885  7999999887776544444321     22222 22  2221    2    


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VG  150 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~  150 (262)
                         ..-|++|..+|....  +  ..+..+   .+..|+.    +++.+.+.+.+...++.++++|-....        .+
T Consensus        75 ---~~aDvVii~ag~~~k--~--g~~R~d---l~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~  140 (326)
T 2zqz_A           75 ---KDADLVVITAGAPQK--P--GETRLD---LVNKNLK----ILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSG  140 (326)
T ss_dssp             ---GGCSEEEECCCCC---------CHHH---HHHHHHH----HHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             ---CCCCEEEEcCCCCCC--C--CCCHHH---HHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcC
Confidence               257999999987422  1  344443   3444433    334444444443337788887543321        12


Q ss_pred             CCCCccchh-hhHHHHHHHHHHHHHHC
Q 024839          151 GSGPHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       151 ~~~~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+.....+. +-.-...+...++..+.
T Consensus       141 ~p~~rviG~gt~LD~~R~~~~la~~lg  167 (326)
T 2zqz_A          141 FPKNRVVGSGTSLDTARFRQSIAEMVN  167 (326)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CCHHHEEEccccchHHHHHHHHHHHhC
Confidence            333344555 33334566666777664

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.42  E-value=0.0066  Score=51.98  Aligned_cols=48  Identities=21%  Similarity=0.379  Sum_probs=42.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++.||+++|.|. |.+|..+|+.|.+.|++|++.+++.++++++.++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            588999999995 889999999999999999999999887777666543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.40  E-value=0.024  Score=49.04  Aligned_cols=44  Identities=25%  Similarity=0.277  Sum_probs=38.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      +.+.+|+|+|+ |.+|..+++.+...|++|++++++.++.+.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46789999997 799999999999999999999999888766544

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.36  E-value=0.019  Score=49.73  Aligned_cols=77  Identities=23%  Similarity=0.222  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-C-C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-G-S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~-~   83 (262)
                      .|.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.   ..  .|..+.+.+   .+.+.+.. + +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa---~~--i~~~~~~~~---~~~~~~~~~g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAGF---ET--IDLRNSAPL---RDQIDQILGKPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTTC---EE--EETTSSSCH---HHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC---cE--EcCCCcchH---HHHHHHHhCCCC
Confidence            5889999996 9999999888877898 899999988876554 44542   22  354442211   22222222 3 5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.34  E-value=0.01  Score=51.41  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++.+.+ ++++.   ..  .|..+.+++   .+++.+..+  +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa---~~--i~~~~~~~~---~~~v~~~t~g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF---EI--ADLSLDTPL---HEQIAALLGEPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC---EE--EETTSSSCH---HHHHHHHHSSSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC---cE--EccCCcchH---HHHHHHHhCCCC
Confidence            5889999995 9999999888777898 688888888776554 45552   22  354443222   233333332  5


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.33  E-value=0.045  Score=45.70  Aligned_cols=142  Identities=15%  Similarity=0.082  Sum_probs=83.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |.+|.+++..|+..+  .++++.++++++++.....+.+.     .+.+. .|  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            36899998 999999999999987  58999999987776544444331     22222 22  2222           2


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|....  +  ..+..+   .+..|..    +++...+.+.+...++.++++|-....        .+.+.
T Consensus        66 ~~aD~Vii~ag~~~~--~--g~~r~d---l~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~  134 (310)
T 2xxj_A           66 EGARAVVLAAGVAQR--P--GETRLQ---LLDRNAQ----VFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPP  134 (310)
T ss_dssp             TTEEEEEECCCCCCC--T--TCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCG
T ss_pred             CCCCEEEECCCCCCC--C--CcCHHH---HHHhhHH----HHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCH
Confidence            368999999987422  2  345544   3444433    334444444443336788887543321        12333


Q ss_pred             Cccchh-hhHHHHHHHHHHHHHHC
Q 024839          154 PHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      ....+. +-.-...+...++..+.
T Consensus       135 ~rviG~gt~LD~~R~~~~la~~lg  158 (310)
T 2xxj_A          135 GRVVGSGTILDTARFRALLAEYLR  158 (310)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHEEecCcchhHHHHHHHHHHHhC
Confidence            345555 33335566666777664

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.27  E-value=0.02  Score=46.47  Aligned_cols=87  Identities=15%  Similarity=0.189  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhC-----C-----CceEEEEecCCCHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIG-----P-----EKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~-----~-----~~~~~~~~D~~~~~~i~~~~   74 (262)
                      +.+.++.|.|+ |.+|..++..|.+.|++ |.+++|+++..+.+.+.++     +     .+..++..- ..+..+.+++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHH
Confidence            34567889996 99999999999999998 8899999887776655422     0     111222222 2334567777


Q ss_pred             HHHHHHhCCcCEEEeCCcCC
Q 024839           75 AYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~~   94 (262)
                      +++.....+=.++|++....
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            76654332334677776543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.26  E-value=0.034  Score=45.75  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=37.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      +++.|.|++|.+|.++++.|.+.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            579999999999999999999999999999999877665543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.23  E-value=0.033  Score=46.66  Aligned_cols=85  Identities=9%  Similarity=0.078  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----CC-----CceEEEEecCCCHHHHHHHHH--
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GP-----EKASYRHCDVRDEKQVEETVA--   75 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-----~~~~~~~~D~~~~~~i~~~~~--   75 (262)
                      ..+++.|.| .|.+|..++..|++.|++|++.+|++++.+++.+.-    .+     .+..++..-+.++..++.++.  
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~  108 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ  108 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence            456888887 599999999999999999999999988776654320    00     123344444556667777775  


Q ss_pred             HHHHHhCCcCEEEeCCc
Q 024839           76 YAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        76 ~~~~~~~~~d~li~~ag   92 (262)
                      .+.....+-.++|+...
T Consensus       109 ~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          109 GVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            56555555566776654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.22  E-value=0.0043  Score=52.94  Aligned_cols=81  Identities=17%  Similarity=0.160  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh---HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .|.++||+||+|++|...+..+...|++|+.+.+..+.   ..+..++++...+  +  |..+. ..++ +.++....++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v--i--~~~~~-~~~~-~~~~~~~~~~  240 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV--I--TEEEL-RRPE-MKNFFKDMPQ  240 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE--E--EHHHH-HSGG-GGGTTSSSCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE--E--ecCcc-hHHH-HHHHHhCCCC
Confidence            58899999999999999988877789988777655432   2244455553222  2  21111 0011 1111111125


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       241 ~Dvvid~~g~  250 (357)
T 1zsy_A          241 PRLALNCVGG  250 (357)
T ss_dssp             CSEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            8999999873

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.22  E-value=0.0017  Score=55.35  Aligned_cols=39  Identities=33%  Similarity=0.526  Sum_probs=34.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      ++.||++.|.| .|.||+.+|+.|.+.|++|++.+++.+.
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            57899999997 7999999999999999999988887654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.19  E-value=0.0098  Score=48.85  Aligned_cols=42  Identities=21%  Similarity=0.192  Sum_probs=36.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .+++||+++|.|.++-+|+.+|..|...|++|.++.+....+
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L  198 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL  198 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH
Confidence            367899999999998899999999999999999987654433

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.19  E-value=0.015  Score=48.39  Aligned_cols=84  Identities=12%  Similarity=0.042  Sum_probs=54.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh-----hCC-----CceEEEEecCCCHHHHHHHH---
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS-----IGP-----EKASYRHCDVRDEKQVEETV---   74 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-----~~~-----~~~~~~~~D~~~~~~i~~~~---   74 (262)
                      .+++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.     ..+     ....++..-+.+...++.++   
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~   85 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE   85 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence            45677886 78999999999999999999999998877665442     110     12334444455666666665   


Q ss_pred             HHHHHHhCCcCEEEeCCc
Q 024839           75 AYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag   92 (262)
                      +.+.....+=.++|+...
T Consensus        86 ~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           86 DGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             CCCGGGSCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence            444333333345666543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.18  E-value=0.0071  Score=51.10  Aligned_cols=70  Identities=14%  Similarity=0.172  Sum_probs=54.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHH-HHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEET-VAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~~~~d~   86 (262)
                      .+.++|.|+ +.+|+.+++.|.++|+ |++++++++..+ +.+    ..+.++..|.++++.++++ ++       +.|.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a~i~-------~a~~  180 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKANVR-------GARA  180 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHTCST-------TEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhcChh-------hccE
Confidence            347999996 8999999999999999 999999988776 432    3577899999998877654 22       5677


Q ss_pred             EEeCC
Q 024839           87 MYSNA   91 (262)
Q Consensus        87 li~~a   91 (262)
                      +|...
T Consensus       181 vi~~~  185 (336)
T 1lnq_A          181 VIVDL  185 (336)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            77654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.17  E-value=0.01  Score=48.48  Aligned_cols=37  Identities=8%  Similarity=0.178  Sum_probs=34.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      ++||+++|.|.++-+|+.+|..|...|++|+++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            6899999999999999999999999999999987653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.16  E-value=0.01  Score=48.71  Aligned_cols=39  Identities=21%  Similarity=0.338  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+++||+++|.|.++-+|+.++..|...|++|.++.|+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            368899999999998899999999999999999987653

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.14  E-value=0.05  Score=45.79  Aligned_cols=113  Identities=12%  Similarity=0.049  Sum_probs=69.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEE-EecCCCHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYR-HCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~-~~D~~~~~~i~~~~~~~~   78 (262)
                      ..+++.|+|+ |.+|..++..|+..|.  +|++++++++..+.....+.+.     ..... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999998 9999999999999996  8999999887665443333211     11222 223322            


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                        +..-|++|-.||....  +  .+++.+   .+..|.    .+.+.+.+.+.+...++.++++|..
T Consensus        87 --~~daDiVIitaG~p~k--p--G~tR~d---ll~~N~----~I~k~i~~~I~k~~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQ--E--GESRLN---LVQRNV----NIFKFIIPNIVKHSPDCLKELHPEL  140 (330)
T ss_dssp             --CSSCSEEEECCSCCCC--S--SCCTTG---GGHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             --hCCCCEEEEeCCCCCC--C--CCCHHH---HHHhhH----HHHHHHHHHHHhhCCCceEEeCCCc
Confidence              1357999999997522  2  344332   333333    3344444444443336778877754

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.14  E-value=0.029  Score=48.96  Aligned_cols=71  Identities=14%  Similarity=0.107  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      -+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.........   +.   -..+..|..|.+.+.++++       ++
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~a---d~~~~~~~~d~~~l~~~a~-------~~   97 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VA---DRHLRAAYDDEAALAELAG-------LC   97 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HS---SEEECCCTTCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---hC---CEEEECCcCCHHHHHHHHh-------cC
Confidence            457999999985 5799999999999999999988665432221   11   1345688889888877773       58


Q ss_pred             CEEEe
Q 024839           85 DIMYS   89 (262)
Q Consensus        85 d~li~   89 (262)
                      |+|+.
T Consensus        98 D~V~~  102 (419)
T 4e4t_A           98 EAVST  102 (419)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            99883

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.13  E-value=0.097  Score=43.77  Aligned_cols=142  Identities=16%  Similarity=0.165  Sum_probs=79.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++.|+|+ |.+|.+++..|+..|.  +|+++++++++.+....++.+      ........|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            5889996 9999999999999986  899999998765533333321      122222222  111           12


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|....  +  .+++.   +.+..|+    -+++...+.+.+...++.++++|.....        .+.+.
T Consensus        68 ~~aDvVii~ag~~~k--p--G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~  136 (314)
T 3nep_X           68 EDSDVCIITAGLPRS--P--GMSRD---DLLAKNT----EIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPT  136 (314)
T ss_dssp             TTCSEEEECCCC-----------CH---HHHHHHH----HHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCG
T ss_pred             CCCCEEEECCCCCCC--C--CCCHH---HHHHhhH----HHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCCh
Confidence            368999999987422  1  23433   3344443    3445555555554446777777653321        12233


Q ss_pred             Cccchhh-hHHHHHHHHHHHHHHC
Q 024839          154 PHAYTIS-KHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~s-K~a~~~~~~~la~e~~  176 (262)
                      ....+.. -.=-..+...++..+.
T Consensus       137 ~rviG~~t~LD~~R~~~~la~~lg  160 (314)
T 3nep_X          137 NRVMGMAGVLDTGRFRSFIAEELD  160 (314)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHEEeecCchHHHHHHHHHHHHhC
Confidence            3445554 3223555566666654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.12  E-value=0.012  Score=49.75  Aligned_cols=39  Identities=21%  Similarity=0.247  Sum_probs=34.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQ   47 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~   47 (262)
                      .+++.|+|+ |.+|.++|..|+..|+ +|++.+++++.++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            457999998 9999999999999998 99999999876665

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.10  E-value=0.012  Score=48.64  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+++||+++|.|.++-+|+.+|..|...|++|.++.|..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            367899999999998899999999999999999997743

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.09  E-value=0.034  Score=45.70  Aligned_cols=83  Identities=18%  Similarity=0.121  Sum_probs=57.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----CC-----CceEEEEecCCCHHHHHHHH---HH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GP-----EKASYRHCDVRDEKQVEETV---AY   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-----~~~~~~~~D~~~~~~i~~~~---~~   76 (262)
                      +++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.-    .+     .+..++..-+.++..+++++   +.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            4688888 589999999999999999999999988776654321    00     12234444455667777777   66


Q ss_pred             HHHHhCCcCEEEeCCc
Q 024839           77 AIEKYGSLDIMYSNAG   92 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag   92 (262)
                      +.....+=.++|+...
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6665544456676643

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.06  E-value=0.2  Score=41.86  Aligned_cols=144  Identities=17%  Similarity=0.186  Sum_probs=80.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CeEEEeeCCchhHHHHHhhhCCC--ceEEEEe-cCCCHHHHHHHHHHHHHHhCC
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-G--AFVIIADIQDELGNQVVSSIGPE--KASYRHC-DVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~-D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.|+||+|.+|.+++..|..+ +  .+++++++.+ ..+.....+.+.  ....... .-.+.+++           ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-----------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHh-----------CC
Confidence            5889999999999999999876 5  4799999886 333222233221  1122111 11222222           36


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-----------cCCC-
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-----------TVGG-  151 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-----------~~~~-  151 (262)
                      .|++|..+|...  ++  .+++.   +.++.|..-...+.+    .+.+...++.++++|-...           ..+. 
T Consensus        70 aDivii~ag~~r--kp--G~~R~---dll~~N~~I~~~i~~----~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~  138 (312)
T 3hhp_A           70 ADVVLISAGVAR--KP--GMDRS---DLFNVNAGIVKNLVQ----QVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVY  138 (312)
T ss_dssp             CSEEEECCSCSC--CT--TCCHH---HHHHHHHHHHHHHHH----HHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEeCCCCC--CC--CCCHH---HHHHHHHHHHHHHHH----HHHHHCCCcEEEEecCcchhHHHHHHHHHHHcCCC
Confidence            899999999642  22  45654   444555444333444    3333233677777765321           1122 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHC
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELG  176 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~  176 (262)
                      +.....+.+-.--..+-..++..+.
T Consensus       139 p~~rv~G~~~LD~~R~~~~la~~lg  163 (312)
T 3hhp_A          139 DKNKLFGVTTLDIIRSNTFVAELKG  163 (312)
T ss_dssp             CTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             CcceEEEEechhHHHHHHHHHHHhC
Confidence            4445566662223455666777663

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.00  E-value=0.085  Score=43.67  Aligned_cols=111  Identities=17%  Similarity=0.165  Sum_probs=69.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++.|+|+ |+||..+|..|+.++.  ++++++..++..+.....+.+      ........+  |.++           .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------h
Confidence            5788895 9999999999998873  699999987655433333322      122222221  2221           1


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTST  145 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~  145 (262)
                      ..-|++|-.||...  ++  .++++++   ++.|.    .+.+.+.+.+.+...++.++.+|-.
T Consensus        68 ~~aDvVvitAG~pr--kp--GmtR~dL---l~~Na----~I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           68 KGSEIIVVTAGLAR--KP--GMTRLDL---AHKNA----GIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             TTCSEEEECCCCCC--CS--SSCHHHH---HHHHH----HHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             CCCCEEEEecCCCC--CC--CCchHHH---HHHHH----HHHHHHHHHHHhcCCceEEEEecCc
Confidence            25799999999752  22  4677654   44453    4555566666665546777777654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.99  E-value=0.073  Score=44.62  Aligned_cols=142  Identities=11%  Similarity=0.149  Sum_probs=80.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |.+|.+++..|+..+.  ++++.++++++++.....+.+     ..+.+. .|  +.+.           +
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~a-----------~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYSD-----------C   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------h
Confidence            57999998 9999999999999885  799999988776654444332     122222 22  2211           2


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|....  +  ..+..+   .+..|    .-+++.+.+.+.+...++.++++|-....        .+.+.
T Consensus        71 ~~aDvVii~ag~~~~--~--g~~R~d---l~~~n----~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~  139 (318)
T 1ez4_A           71 KDADLVVITAGAPQK--P--GESRLD---LVNKN----LNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPK  139 (318)
T ss_dssp             TTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCG
T ss_pred             CCCCEEEECCCCCCC--C--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCH
Confidence            368999999987422  1  233322   23333    33445555555554447788887543321        12333


Q ss_pred             Cccchh-hhHHHHHHHHHHHHHHC
Q 024839          154 PHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      ....+. +-.-...+...++..+.
T Consensus       140 ~rviG~gt~LD~~R~~~~la~~lg  163 (318)
T 1ez4_A          140 ERVIGSGTSLDSSRLRVALGKQFN  163 (318)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHEEeccccchHHHHHHHHHHHhC
Confidence            344555 33334566666777664

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.99  E-value=0.069  Score=44.22  Aligned_cols=39  Identities=21%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ   47 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~   47 (262)
                      -+++.|.|+ |.+|.++|..|++.|++|++.+++++..+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            367999996 899999999999999999999999876654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.98  E-value=0.0076  Score=50.69  Aligned_cols=76  Identities=16%  Similarity=0.240  Sum_probs=50.0

Q ss_pred             CC-EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GK-VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k-~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |+ ++||+||+|++|...+..+...|++|+.+++++++.+.+ ++++...+    .|..+.+  .+.++++.  .+++|+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v----~~~~~~~--~~~~~~~~--~~~~d~  220 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEV----ISREDVY--DGTLKALS--KQQWQG  220 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEE----EEHHHHC--SSCCCSSC--CCCEEE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEE----EECCCch--HHHHHHhh--cCCccE
Confidence            44 799999999999999998888999999999987776554 34553221    2321110  00011110  136899


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.++|
T Consensus       221 vid~~g  226 (330)
T 1tt7_A          221 AVDPVG  226 (330)
T ss_dssp             EEESCC
T ss_pred             EEECCc
Confidence            999987

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.97  E-value=0.093  Score=43.63  Aligned_cols=141  Identities=11%  Similarity=0.090  Sum_probs=73.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCC-----ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPE-----KASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|+|+ |.+|..++..|+..|.  +|+++++++++.+.....+.+.     ..... .+  +.+.           ..
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~~--~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-HG--GHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-EE--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-EC--CHHH-----------hC
Confidence            6889998 9999999999999998  8999999987665544444321     11221 11  2111           23


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC------CCCCCcc
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV------GGSGPHA  156 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~------~~~~~~~  156 (262)
                      .-|++|..++.....    ..+..   +.+..|..-...+.+.+.++   .. ++.++++|-.....      -.+....
T Consensus        67 ~aDvVIi~~~~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p-~~~vi~~tNP~~~~~~~~~~~~~~~rv  135 (304)
T 2v6b_A           67 DAQVVILTAGANQKP----GESRL---DLLEKNADIFRELVPQITRA---AP-DAVLLVTSNPVDLLTDLATQLAPGQPV  135 (304)
T ss_dssp             TCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH---CS-SSEEEECSSSHHHHHHHHHHHSCSSCE
T ss_pred             CCCEEEEcCCCCCCC----CCcHH---HHHHhHHHHHHHHHHHHHHh---CC-CeEEEEecCchHHHHHHHHHhCChhcE
Confidence            689999999864211    22222   23444444333344443332   22 56666654332210      0122233


Q ss_pred             chh-hhHHHHHHHHHHHHHHC
Q 024839          157 YTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       157 Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      .+. +-.-...+...++..+.
T Consensus       136 iG~gt~Ld~~r~~~~la~~l~  156 (304)
T 2v6b_A          136 IGSGTVLDSARFRHLMAQHAG  156 (304)
T ss_dssp             EECTTHHHHHHHHHHHHHHHT
T ss_pred             EeCCcCchHHHHHHHHHHHhC
Confidence            444 33334556666777663

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.94  E-value=0.047  Score=45.60  Aligned_cols=143  Identities=14%  Similarity=0.105  Sum_probs=76.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCC------ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPE------KASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |.+|..++..|+..|. +|+++++++++++.....+.+.      .......  .+.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            47999998 9999999999999996 8999999887665443333221      1111111  12111           2


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSG  153 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~  153 (262)
                      ..-|++|..+|....  +  ..+..   +.+..|    .-+.+.+.+.+.+...++.++++|-....        .+.+.
T Consensus        69 ~~aD~Vi~a~g~p~~--~--g~~r~---dl~~~n----~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~~~~  137 (309)
T 1ur5_A           69 ANSDVIVVTSGAPRK--P--GMSRE---DLIKVN----ADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPK  137 (309)
T ss_dssp             TTCSEEEECCCC------------C---HHHHHH----HHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHCCCG
T ss_pred             CCCCEEEEcCCCCCC--C--CCCHH---HHHHHH----HHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcCCCH
Confidence            358999999987422  1  12222   223333    23444455555443324555554332211        11233


Q ss_pred             Cccchh-hhHHHHHHHHHHHHHHC
Q 024839          154 PHAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       154 ~~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      ....+. +-.--..+...++..+.
T Consensus       138 ~rviG~gt~LD~~r~~~~la~~lg  161 (309)
T 1ur5_A          138 ERVIGQAGVLDAARYRTFIAMEAG  161 (309)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHEEECCcchHHHHHHHHHHHHhC
Confidence            345555 33335666667777764

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.93  E-value=0.019  Score=48.55  Aligned_cols=76  Identities=25%  Similarity=0.300  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.++||.|+ +++|...+..+... |++|+.+++++++.+. .++++..    ...|..+.+..    +++.+..+  .
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~-~~~~Ga~----~~i~~~~~~~~----~~v~~~t~g~g  232 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL-AKKIGAD----VTINSGDVNPV----DEIKKITGGLG  232 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH-HHHTTCS----EEEEC-CCCHH----HHHHHHTTSSC
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh-hhhcCCe----EEEeCCCCCHH----HHhhhhcCCCC
Confidence            5889999987 77887777777655 7899999999887644 4444432    22344443333    33444443  4


Q ss_pred             cCEEEeCCc
Q 024839           84 LDIMYSNAG   92 (262)
Q Consensus        84 ~d~li~~ag   92 (262)
                      +|.++.+++
T Consensus       233 ~d~~~~~~~  241 (348)
T 4eez_A          233 VQSAIVCAV  241 (348)
T ss_dssp             EEEEEECCS
T ss_pred             ceEEEEecc
Confidence            788888776

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.92  E-value=0.015  Score=47.81  Aligned_cols=44  Identities=14%  Similarity=0.121  Sum_probs=37.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQ   47 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~   47 (262)
                      .+++||+++|.|++.-+|+.+|..|...|++|.++.++.+.+.+
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  198 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH  198 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            36889999999999889999999999999999999766544433

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.90  E-value=0.016  Score=47.99  Aligned_cols=42  Identities=17%  Similarity=0.224  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG   45 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~   45 (262)
                      .++.||+++|.|++.-+|+.+|..|...|++|.++.++.+.+
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  202 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL  202 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccH
Confidence            367899999999999999999999999999999987654333

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.87  E-value=0.013  Score=49.04  Aligned_cols=73  Identities=15%  Similarity=0.228  Sum_probs=49.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      |+ +||+|++|++|...+..+...|++|+.+++++++.+.+ ++++...+  +  |..+.+.+    +++  ..+++|++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v--i--~~~~~~~~----~~~--~~~~~d~v  215 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSLGANRI--L--SRDEFAES----RPL--EKQLWAGA  215 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTCSEE--E--EGGGSSCC----CSS--CCCCEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEE--E--ecCCHHHH----Hhh--cCCCccEE
Confidence            45 99999999999999999888999999999988876555 44553222  1  22221111    111  11368999


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      |.++|
T Consensus       216 ~d~~g  220 (324)
T 3nx4_A          216 IDTVG  220 (324)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            98875

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.84  E-value=0.59  Score=38.10  Aligned_cols=77  Identities=13%  Similarity=0.106  Sum_probs=54.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEE-eeCCch---------------------hHHHHHhhhCCCceEEEEecCC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH-GAFVII-ADIQDE---------------------LGNQVVSSIGPEKASYRHCDVR   65 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~-g~~V~~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~~D~~   65 (262)
                      .++.|+|++|.+|+.+++.+.+. +.+++. ++|+.+                     .++++.+..   +   +..|++
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~---D---VVIDfT   81 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEA---D---YLIDFT   81 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHC---S---EEEECS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCC---C---EEEEcC
Confidence            47999999999999999999875 566654 566532                     122222211   1   457889


Q ss_pred             CHHHHHHHHHHHHHHhCCcCEEEeCCcC
Q 024839           66 DEKQVEETVAYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        66 ~~~~i~~~~~~~~~~~~~~d~li~~ag~   93 (262)
                      .++...+.+..+.+.  ++.+|+-+.|.
T Consensus        82 ~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           82 LPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             CHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            999888888888776  67888877663

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.81  E-value=0.041  Score=45.53  Aligned_cols=83  Identities=19%  Similarity=0.133  Sum_probs=58.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----CC----CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GP----EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~----~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.-    .+    ....++..-+.++..++++++.+...
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHh
Confidence            4677887 689999999999999999999999988766554321    00    01344555566777788888777655


Q ss_pred             hCCcCEEEeCCc
Q 024839           81 YGSLDIMYSNAG   92 (262)
Q Consensus        81 ~~~~d~li~~ag   92 (262)
                      ..+-.++|+...
T Consensus        95 l~~g~ivv~~st  106 (296)
T 3qha_A           95 AKPGTVIAIHST  106 (296)
T ss_dssp             CCTTCEEEECSC
T ss_pred             cCCCCEEEEeCC
Confidence            444466776654

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.79  E-value=0.07  Score=41.39  Aligned_cols=75  Identities=12%  Similarity=0.155  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---------------CCceEEEEecCCCHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---------------PEKASYRHCDVRDEKQVE   71 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~i~   71 (262)
                      .+.+||-.|++.|.-   +..|+++|++|+.++.+++.++.+.+...               ..++.++.+|+.+...-+
T Consensus        22 ~~~~vLD~GCG~G~~---~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQD---MSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSHH---HHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcHh---HHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            578999999998853   45677789999999999998887766543               247889999998754211


Q ss_pred             HHHHHHHHHhCCcCEEEeCCcC
Q 024839           72 ETVAYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag~   93 (262)
                               .+.+|+|+.+...
T Consensus        99 ---------~~~fD~v~~~~~l  111 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAAM  111 (203)
T ss_dssp             ---------HHSEEEEEEESCG
T ss_pred             ---------CCCEEEEEECcch
Confidence                     1379999876543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.77  E-value=0.046  Score=45.61  Aligned_cols=142  Identities=15%  Similarity=0.155  Sum_probs=81.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|+|+ |.+|..++..|+..|. +|++.++++++++.....+.+      ....+...  .+.+.           +.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~~   66 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYED-----------MR   66 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG-----------GT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHHH-----------hC
Confidence            3789998 9999999999998887 699999998766543333321      12222221  12111           23


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc--------CCCCCC
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST--------VGGSGP  154 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~~~~  154 (262)
                      .-|++|..+|...  .+  .++..++   +..|    .-+.+.+.+.+.+...++.+|++|-....        .+.+..
T Consensus        67 ~aD~Vi~~ag~~~--k~--G~~r~dl---~~~n----~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~~~~p~~  135 (308)
T 2d4a_B           67 GSDIVLVTAGIGR--KP--GMTREQL---LEAN----ANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVMYKKTGFPRE  135 (308)
T ss_dssp             TCSEEEECCSCCC--CS--SCCTHHH---HHHH----HHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGG
T ss_pred             CCCEEEEeCCCCC--CC--CCcHHHH---HHHH----HHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCCChh
Confidence            6899999998753  22  3454433   3333    33444455555442336777777543221        123334


Q ss_pred             ccchh-hhHHHHHHHHHHHHHHC
Q 024839          155 HAYTI-SKHGLLGLVRSAASELG  176 (262)
Q Consensus       155 ~~Y~~-sK~a~~~~~~~la~e~~  176 (262)
                      ...+. +-.--..+...++..+.
T Consensus       136 rviG~gt~LD~~R~~~~la~~lg  158 (308)
T 2d4a_B          136 RVIGFSGILDSARMAYYISQKLG  158 (308)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHT
T ss_pred             hEEEecccchHHHHHHHHHHHhC
Confidence            45666 33335666667777764

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.73  E-value=0.057  Score=47.24  Aligned_cols=39  Identities=28%  Similarity=0.486  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      .+.||+++|.| .|.||+.+|+.+...|.+|+++++++..
T Consensus       244 ~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          244 MMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             cccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            57899999999 5679999999999999999999887654

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=95.67  E-value=0.07  Score=45.49  Aligned_cols=33  Identities=21%  Similarity=0.219  Sum_probs=23.7

Q ss_pred             CEEEEecCCC--hH--HHHHHHHHHHcCCeEEEeeCC
Q 024839            9 KVAIIMGAAS--GI--GEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         9 k~~lItG~s~--gi--G~~ia~~l~~~g~~V~~~~r~   41 (262)
                      |+++|+||++  +|  +.++|++|.++|++|..++..
T Consensus         3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            4566665543  33  678999999999999877644

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.66  E-value=0.13  Score=42.97  Aligned_cols=42  Identities=24%  Similarity=0.216  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVV   49 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~   49 (262)
                      ..+++.|.| .|.+|.++++.|.+.|+  +|++.+|+++..+.+.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            347899999 79999999999999999  9999999987765543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.62  E-value=0.035  Score=44.03  Aligned_cols=56  Identities=18%  Similarity=0.248  Sum_probs=41.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDV   64 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~   64 (262)
                      +++||.+||.|| |.+|...++.|.+.|+.|++++.... .++++.+.   .++.++.-+.
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~---~~i~~i~~~~   84 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAK---GQLRVKRKKV   84 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHT---TSCEEECSCC
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHc---CCcEEEECCC
Confidence            678999999996 58999999999999999999887643 33333332   3455554443

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.62  E-value=0.065  Score=45.25  Aligned_cols=35  Identities=14%  Similarity=0.335  Sum_probs=29.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      +++++|+|.| .||+|.++++.|+..|. ++.++++.
T Consensus        32 L~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           32 IKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HhCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            4678999999 58999999999999995 58888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	262
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-67
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-66
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	6e-65
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-64
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-64
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-62
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	8e-61
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-60
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-59
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-59
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-58
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-58
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-58
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-58
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-58
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-57
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-56
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-56
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	8e-56
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-55
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	6e-55
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-55
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-54
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-53
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-53
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-53
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-52
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-52
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-52
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-52
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-52
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-51
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-50
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-50
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-50
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-49
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-49
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-49
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-48
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-47
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-47
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-46
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-46
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-46
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-45
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-44
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	7e-44
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-41
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-39
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-39
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-38
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-36
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-36
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-35
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	7e-33
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-31
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	5e-29
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-29
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-28
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-24
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-23
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	6e-22
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-14
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-12
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-11
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.001
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.003

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  206 bits (526), Expect = 3e-67
 Identities = 83/251 (33%), Positives = 124/251 (49%), Gaps = 11/251 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
              GK  ++ G A GIG A A+ FA  GA V + D++ E G +V  +IG    ++   D+
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG---GAFFQVDL 57

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            DE++    V  A    G +D++ +NA +A P G+ L + + ++ R +  NL   +    
Sbjct: 58  EDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            AAR M       +I+   S           AY  SK GL+ L RS A +L    IRVN 
Sbjct: 117 LAAREMRKVGGG-AIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175

Query: 185 VSPFGVATPFSAGTI---NDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVSG 239
           V+P  +AT      I    D E       +L     + K + VAEA LFLAS+++++++G
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235

Query: 240 HDLVVDGGFTA 250
             L VDGG TA
Sbjct: 236 AILPVDGGMTA 246

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  204 bits (519), Expect = 6e-66
 Identities = 122/265 (46%), Positives = 161/265 (60%), Gaps = 8/265 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCD 63
           RLQ KVAII G A GIGE TAKLF  +GA V+IADI D+ G +V ++IG P+  S+ HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMA 122
           V  ++ V   V   I K+G LDIM+ N GV      +IL+     F R +  N+ G+ + 
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHA-YTISKHGLLGLVRSAASELGKHGIR 181
            K+AARVM+  K +GSI+ T S +S   G G    YT +KH +LGL  S  +ELG++GIR
Sbjct: 123 AKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 182 VNCVSPFGVATPFSAGTIND----VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
           VNCVSP+ VA+P            VE    + ANLKG +L+A+ VA+A  +LA DES YV
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241

Query: 238 SGHDLVVDGGFTAVTNVMSMLEGHG 262
           SG +LV+DGG+T           HG
Sbjct: 242 SGLNLVIDGGYTRTNPAFPTALKHG 266

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  200 bits (511), Expect = 6e-65
 Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 4/249 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCD 63
           RL GKVAII G   GIG A A  F E GA V+I     ++G +   S+G P++  +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
             DE    +      + +G +  + +NAG+     ++ +   A++ + +A NL G     
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE--LGKHGIR 181
           +   + M    +  SII  +S    VG     AY  SK  +  + +SAA +  L  + +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           VN V P  + TP         E    +     G + +   +A   ++LAS+ES + +G +
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE 241

Query: 242 LVVDGGFTA 250
            VVDGG+TA
Sbjct: 242 FVVDGGYTA 250

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  199 bits (507), Expect = 3e-64
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 3/247 (1%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+ K+A+I G A+GIG A A+ FA  GA + IAD+      +        +     CDV
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
                VE      I  +G  DI+ +NAG+  P+    +L   Q+ +T   N+    +  K
Sbjct: 62  SQPGDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
                M  N   G II  TST   +       Y  +K   +G  R+ AS+LGK GI VN 
Sbjct: 121 AFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 185 VSPFGVATPFS-AGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           ++P  V T  + A  ++ +   +  +      +     +  AA FLASD++++++G  L 
Sbjct: 180 IAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA 239

Query: 244 VDGGFTA 250
           VDGG   
Sbjct: 240 VDGGMVR 246

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (503), Expect = 9e-64
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 10/250 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           R  GKV ++ G   GIG    + F   GA V+I D  +  G  +   +    A +  CDV
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E  V+  V+  I ++G LD + +NAG   P     +     F + +  NL G+    K
Sbjct: 61  TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A   +  ++  G++I  +S    +G +    Y  +K  +  + ++ A +   +G+RVNC
Sbjct: 121 LALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNC 178

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAYVSG 239
           +SP  + TP        +      +         G + +   V  AA+FLAS+ + + +G
Sbjct: 179 ISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTG 237

Query: 240 HDLVVDGGFT 249
            +L+V GG  
Sbjct: 238 IELLVTGGAE 247

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  192 bits (490), Expect = 9e-62
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 10/252 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RLQGKVA++ G ASG+G    KL    GA V  +DI +  G Q+ + +G E++ +   DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             E      +A    + G+L+++ +NAG+  P G +    +  F R +  N     +  +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG--IRV 182
                M   +  GSII   S +S +       Y+ SK  +  L R+AA    K G  IRV
Sbjct: 121 QGIAAM--KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 183 NCVSPFGVATPFSAGTIND--VEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVS 238
           N + P G+ TP    ++     +  V     L   G     + +A+  LFLASDES+ +S
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 239 GHDLVVDGGFTA 250
           G +L  D     
Sbjct: 239 GSELHADNSILG 250

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  190 bits (485), Expect = 8e-61
 Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 18/264 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPEKASY 59
           R   KVAII G+++GIG ATA LFA  GA V I     E   +    I       +  + 
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATNL 116
              DV  +   +E ++  + K+G LDI+ +NAG A P     T     +  +D T+  NL
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 117 AGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG 176
              +   K A   + + K     I  +  +          Y+I+K  +    R+ A +L 
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNIS-SIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 180

Query: 177 KHGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLK-----GIVLKAKHVAEAALF 228
           +HGIRVN +SP  VAT F +         + F   +A +K     G++ + + +AE   F
Sbjct: 181 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 240

Query: 229 LASDE-SAYVSGHDLVVDGGFTAV 251
           LA  + S+Y+ GH LVVDGG + +
Sbjct: 241 LADRKTSSYIIGHQLVVDGGSSLI 264

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  189 bits (482), Expect = 2e-60
 Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 3/245 (1%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           L GK  II G A G+G   A+     GA V++AD+ DE G      +G + A Y+H DV 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVT 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            E+  +  VAYA E++GS+D + +NAG++     +    + +F + +  NL G  + +K 
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIGMKT 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M      GSI+  +S A  +G +   +Y  SK G+ GL + AA ELG   IRVN V
Sbjct: 121 VIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV 179

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
            P    TP +A T             +  +  +   +A A + L SD S+YV+G +L VD
Sbjct: 180 HPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 239

Query: 246 GGFTA 250
           GG+T 
Sbjct: 240 GGWTT 244

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  186 bits (474), Expect = 3e-59
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 9/252 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH--CD 63
           L+G  A++ G + GIG    +  A  GA V       +  N  ++    +        CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 64  VRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           +    + +E +      + G L+I+ +NAG+        D  +  +   ++ N   +   
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
              A   + A++ RG+++  +S +  +       Y  +K  +  L R  A E  K  IRV
Sbjct: 125 SVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDESAYVS 238
           N V P  +AT     TI D E        +    L+     K +A    FL    ++YV+
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVT 243

Query: 239 GHDLVVDGGFTA 250
           G  + VDGG  A
Sbjct: 244 GQIIYVDGGLMA 255

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  185 bits (472), Expect = 3e-59
 Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 10/248 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
              G  A++ GA  GIG  T K     GA V+     +     +              D+
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDL 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D    E+    A+   G +D++ +NA +       L++    FDR+ + NL       +
Sbjct: 60  GDWDATEK----ALGGIGPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR M+   + GSI+  +S  + V       Y+ +K  +  L ++ A ELG H IRVN 
Sbjct: 115 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 174

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK--GIVLKAKHVAEAALFLASDESAYVSGHDL 242
           V+P  V T        D E F  K+          + + V  + LFL SD SA  SG  +
Sbjct: 175 VNPTVVLTDMGKKVSADPE-FARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI 233

Query: 243 VVDGGFTA 250
           +VD G+ A
Sbjct: 234 LVDAGYLA 241

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  185 bits (471), Expect = 1e-58
 Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 18/265 (6%)

Query: 4   PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPEKAS 58
           PR   K  II G+++GIG  TA LFA+ GA V I     E   +    I       ++ +
Sbjct: 1   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 60

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP---VGTILDLDMAQFDRTIATN 115
               DV  E   ++ +   ++++G +D++ +NAG A P     T  D  +  + +T+  N
Sbjct: 61  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L   +   K     +VA+K    +  ++  A          Y I+K  L    RS A +L
Sbjct: 121 LQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 179

Query: 176 GKHGIRVNCVSPFGVATPFSAGTIND---VEGFVCKVANLK-----GIVLKAKHVAEAAL 227
            K GIRVN VSP  V T F+          + F   +A+ K     G   K +H+A   L
Sbjct: 180 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 239

Query: 228 FLASDE-SAYVSGHDLVVDGGFTAV 251
           FLA    S Y+ G  +V DGG + V
Sbjct: 240 FLADRNLSFYILGQSIVADGGTSLV 264

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  184 bits (468), Expect = 2e-58
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 5/248 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCD 63
           L+ K  ++ G   GIG A  + FA  GA +      +   N+ +S    +  + +   CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 64  VRDEKQVEETVAYAIEKY-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
                + E+ +      + G LDI+ +N G        LD     F   I+TNL  +   
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLESAYHL 124

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            + A  ++ A+    +II  +S A  V  S    Y+ +K  L  L R+ A E    GIR 
Sbjct: 125 SQLAHPLLKASGCG-NIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           N V+P  +ATP +    +D    V       G   + + V+    FL    ++Y++G  +
Sbjct: 184 NAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTI 243

Query: 243 VVDGGFTA 250
            VDGG T 
Sbjct: 244 CVDGGLTV 251

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  182 bits (464), Expect = 5e-58
 Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 7/246 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL+ K  +I GAA GIG AT +LFA+ GA ++  DI++    +   ++G   A     DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG---AHPVVMDV 58

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D   VE   A A+   G LD +   AG+         + +  ++  +  NL GS +  K
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A+  M         I  T++   +G  G   Y  S  G++GL R+ A ELG+ GIRVN 
Sbjct: 118 AASEAMREKN--PGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           ++P  + T  +A     V         L G   K   VA AALFL SDES++++G  L V
Sbjct: 176 LAPGFIETRMTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFITGQVLFV 234

Query: 245 DGGFTA 250
           DGG T 
Sbjct: 235 DGGRTI 240

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 8e-58
 Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 8/247 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            L G+  ++ GA  GIG  T +     GA V+         + +V             D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D +  E     A+   G +D++ +NA VA      L++    FDR+   NL   +   +
Sbjct: 62  GDWEATER----ALGSVGPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR ++A  + G+I+  +S  S    +    Y  +K  L  L +  A ELG H IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHDLV 243
           V+P  V T     T +D       +  +  G   + +HV  A LFL SD S   +G  L 
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP 236

Query: 244 VDGGFTA 250
           V+GGF A
Sbjct: 237 VEGGFWA 243

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 9e-58
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 11/252 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYR 60
           R + ++A++ GA+ GIG A A+   + G  V+          ++ +       P      
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 66

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            CD+ +E+ +    +    ++  +DI  +NAG+A P  T+L    + +      N+    
Sbjct: 67  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALS 125

Query: 121 MAVKYAARVMVANKI-RGSIICTTSTAS--TVGGSGPHAYTISKHGLLGLVRSAASEL-- 175
           +  + A + M    +  G II   S +    +  S  H Y+ +K+ +  L      EL  
Sbjct: 126 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 185

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            +  IR  C+SP  V T F+    +                LK + VAEA +++ S  + 
Sbjct: 186 AQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-MKCLKPEDVAEAVIYVLSTPAH 244

Query: 236 YVSGHDLVVDGG 247
              G   +   G
Sbjct: 245 IQIGDIQMRPTG 256

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  182 bits (464), Expect = 3e-57
 Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 24/255 (9%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG---------NQVVSSIGPE 55
           R  G+V ++ GA  G+G A A  FAE GA V++ D+  +           ++VV  I   
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-R 62

Query: 56  KASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATN 115
           +      +    +  E+ V  A++ +G +D++ +NAG+     +   +    +D     +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWDIIQRVH 121

Query: 116 LAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
           L GS    + A   M      G II T S +   G  G   Y+ +K GLLGL  +   E 
Sbjct: 122 LRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
            K+ I  N ++P   +         D+              LK ++VA   L+L  + S 
Sbjct: 181 RKNNIHCNTIAPNAGSRMTETVMPEDL-----------VEALKPEYVAPLVLWLCHE-SC 228

Query: 236 YVSGHDLVVDGGFTA 250
             +G    V  G+  
Sbjct: 229 EENGGLFEVGAGWIG 243

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  178 bits (453), Expect = 3e-56
 Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 5/249 (2%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRHC 62
           L+G+VA++ G + G+G   A+  AE G  V++A    E  ++    +  +   +     C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV + ++V++ +    EK+G LD + + AG+        +  + +F + I  NL G+   
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            + A  ++  +     I   + T   V      AY  SK G+  L ++ A E G++GIRV
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSGHD 241
           N ++P    T  +    +D E     +  +  G     + +   A+FLAS+E+ YV+G  
Sbjct: 182 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI 241

Query: 242 LVVDGGFTA 250
           + VDGG+TA
Sbjct: 242 IFVDGGWTA 250

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  177 bits (451), Expect = 5e-56
 Identities = 82/246 (33%), Positives = 121/246 (49%), Gaps = 9/246 (3%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKVA++ G A G+G +  +     GA V+  DI DE G  + + +  + A Y H DV
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDV 61

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
               Q +  V  A+  +G L ++ +NAG+    GTI D  + ++ R +  NL G  + ++
Sbjct: 62  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI-GTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
              + M       SII  +S     G    H YT +K  + GL +S A ELG  GIRVN 
Sbjct: 121 AVVKPMKEAGRG-SIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           + P  V TP +     D+           G   +   V+   ++LASDES+Y +G + VV
Sbjct: 180 IHPGLVKTPMTDWVPEDIF------QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVV 233

Query: 245 DGGFTA 250
           DGG  A
Sbjct: 234 DGGTVA 239

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  177 bits (451), Expect = 8e-56
 Identities = 82/248 (33%), Positives = 116/248 (46%), Gaps = 5/248 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
           RL GK AII GA +GIG+  A  FA  GA V+++DI  +  N VV  I     +A    C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           D+  E+++     +AI K G +DI+ +NAG  GP     D+ MA F R    N+      
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFHL 125

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +  A  M      G I+  TS A+        +Y  SK     LVR+ A +LG+  IRV
Sbjct: 126 SQLVAPEME-KNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           N ++P  + T      I                + + + +A AALFL S  +++VSG  L
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244

Query: 243 VVDGGFTA 250
            V GG   
Sbjct: 245 TVSGGGVQ 252

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  175 bits (445), Expect = 5e-55
 Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 5/247 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
             + KVA++ GA  GIG   AK+ A+  + VI      +  + VV  I     ++S    
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV  ++++ E +   + ++ ++DI+ +NAG+      +   +  +++  + TNL      
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKN-DEWEDVLRTNLNSLFYI 125

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
            +  ++ M+ N+  G II  +S     G  G   Y+ SK G++G  +S A EL    I V
Sbjct: 126 TQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
           N ++P  +++  +      ++  +       G +   + VA  A FL+SD+S Y++G   
Sbjct: 185 NAIAPGFISSDMTDKISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKSGYINGRVF 243

Query: 243 VVDGGFT 249
           V+DGG +
Sbjct: 244 VIDGGLS 250

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  175 bits (444), Expect = 6e-55
 Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 7/247 (2%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK  ++ GAASGIG A   LFA  GA ++  D ++ L  + V+++  E A     DV
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-AIAVVADV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D K VE   A A+E++G L  +   AGVA       +L +  +++ +  NL GS +  +
Sbjct: 61  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
            A  V+            T + + +G  G   Y   K G++GL R+ A EL + G+RVN 
Sbjct: 120 KAGEVLEEGGSL----VLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV 244
           + P  + TP +AG            + L G   + + VA+AALFL S+ESAY++G  L V
Sbjct: 176 LLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYITGQALYV 234

Query: 245 DGGFTAV 251
           DGG + V
Sbjct: 235 DGGRSIV 241

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  175 bits (445), Expect = 7e-55
 Identities = 63/255 (24%), Positives = 99/255 (38%), Gaps = 12/255 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
               K  I+ G   GIG A  +  A  GA V +         +V   +G E   K     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV +   V +T+       G +  + +NAGV   V    +L    F      N+ G   
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 122 AVKYAARVMVANKIRGSII-------CTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
             +  A++ +  + +GSI+          + +S  G      Y  SK     LV+  A+E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES 234
               GIRVN +SP  V T  +A     +         L     + + +   A+ L SD +
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFA-QPEEMTGQAILLLSDHA 243

Query: 235 AYVSGHDLVVDGGFT 249
            Y++G +  +DGG  
Sbjct: 244 TYMTGGEYFIDGGQL 258

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  174 bits (443), Expect = 2e-54
 Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 16/265 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----PEKASY 59
           R  GK  II G+++GIG + A +FA+ GA V I    ++   +    I       EK + 
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGT-ILDLDMAQFDRTIATNLAG 118
              DV +    ++ +   + K+G +DI+ +NAG     GT   D  +  + +T   N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
            +   +     ++  K     +  +  A     SG   Y  +K  L    R  A +L +H
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVS-SIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 179

Query: 179 GIRVNCVSPFGVATPFSAGTI------NDVEGFVCKVANLK--GIVLKAKHVAEAALFLA 230
           G+RVN VSP  VAT F           + +  F+         G   K + +A   +FLA
Sbjct: 180 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 239

Query: 231 S-DESAYVSGHDLVVDGGFTAVTNV 254
             + S+Y+ G  +V DGG T V  +
Sbjct: 240 DRNLSSYIIGQSIVADGGSTLVMGM 264

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  172 bits (437), Expect = 2e-53
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 6/256 (2%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKA 57
           +     QGKVA I G  +G+G+    L +  GA  +IA  + ++       I      K 
Sbjct: 18  LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKV 77

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               CDVRD   V+ TV+  I+  G  +I+ +NA     +     L    +       L 
Sbjct: 78  HAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLN 136

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+        + ++  +   + +  T+  +  G         +K G+  + +S A+E GK
Sbjct: 137 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGK 196

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANL--KGIVLKAKHVAEAALFLASDESA 235
           +G+R N + P  + T  +   ++    F  ++      G +   + +A  A FL SD ++
Sbjct: 197 YGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYAS 256

Query: 236 YVSGHDLVVDGGFTAV 251
           +++G  +  DGG   +
Sbjct: 257 WINGAVIKFDGGEEVL 272

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 18/260 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           +L+G+  +I G ASG+G A    F   GA V + D   E   ++ +  G +       DV
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG-DNVLGIVGDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDM----AQFDRTIATNLAGSV 120
           R  +  ++  +  + ++G +D +  NAG+      ++DL      A FD     N+ G +
Sbjct: 61  RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            AVK     +VA++  G++I T S A      G   YT +KH ++GLVR  A EL    +
Sbjct: 121 HAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYV 177

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLK---------GIVLKAKHVAEAALFLAS 231
           RVN V   G+ +     +   +         L          G + + +    A +F A+
Sbjct: 178 RVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFAT 237

Query: 232 -DESAYVSGHDLVVDGGFTA 250
             ++A  +G  L  DGG   
Sbjct: 238 RGDAAPATGALLNYDGGLGV 257

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  171 bits (433), Expect = 4e-53
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYR 60
           R   +V +I G  SG+G ATA   A  GA + + D+  E      +++       +    
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV DE QVE  V    E++G +D  ++NAG+ G          A+FD+ ++ NL G  
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           + ++   ++M      G ++ T S     G      Y  +KHG++GL R++A E G++GI
Sbjct: 121 LGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVA-------NLKGIVLKAKHVAEAALFLASDE 233
           R+N ++P  + TP    ++  ++    + A       N      +A  +A    FL SD+
Sbjct: 180 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239

Query: 234 SAYVSGHDLVVDGGFTA 250
           ++YV+   + +DGG +A
Sbjct: 240 ASYVNATVVPIDGGQSA 256

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  169 bits (429), Expect = 1e-52
 Identities = 52/254 (20%), Positives = 88/254 (34%), Gaps = 12/254 (4%)

Query: 11  AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV 70
           AI+       G  +A   +E G  V   D   +  +++ +       +Y       E++ 
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA----FAETYPQLKPMSEQEP 58

Query: 71  EETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVM 130
            E +      YG +D++ SN   A     I    +  +   +          V   A  M
Sbjct: 59  AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 118

Query: 131 VANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGV 190
              +  G II  TS            YT ++ G   L  + + ELG++ I V  + P  +
Sbjct: 119 K-KRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYL 177

Query: 191 ATPFSAGTINDVEGFVC--KVANLKGIVL-----KAKHVAEAALFLASDESAYVSGHDLV 243
            +  S               VA++K +         K + E   FLAS    Y++G    
Sbjct: 178 HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFW 237

Query: 244 VDGGFTAVTNVMSM 257
           + GGF  +     M
Sbjct: 238 LAGGFPMIERWPGM 251

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  169 bits (428), Expect = 2e-52
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 8/252 (3%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYR--HCD 63
           L+G  A++ G + GIG A  +  A  GA V      ++  ++ +     +  +     CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           +    + ++ +      +     +  N           D     ++  + TN   +    
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +  A  ++     G++I  +S A          Y+ SK  +  + +S A E  K  IRVN
Sbjct: 124 QI-AYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN 182

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAYVS 238
            V+P  + TP     I        ++ N       G   K + V+    FL    ++Y++
Sbjct: 183 SVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYIT 242

Query: 239 GHDLVVDGGFTA 250
           G  +  DGGFTA
Sbjct: 243 GQIIWADGGFTA 254

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 2e-52
 Identities = 57/269 (21%), Positives = 111/269 (41%), Gaps = 15/269 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-------KA 57
            LQG+VAI+ G A+GIG+A  K   E G+ V+IA  + E        +          + 
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
               C++R+E++V   V   ++ +G ++ + +N G    +     +    +   + TNL 
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-GQFLSPAEHISSKGWHAVLETNLT 127

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+    K      +       +     T +    +       ++ G+  L +S A E   
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA--ARAGVYNLTKSLALEWAC 185

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLK----AKHVAEAALFLASDE 233
            GIR+NCV+P  + +  +            +  + + I  K     + V+    FL S  
Sbjct: 186 SGIRINCVAPGVIYSQTAVENYGSWGQSFFE-GSFQKIPAKRIGVPEEVSSVVCFLLSPA 244

Query: 234 SAYVSGHDLVVDGGFTAVTNVMSMLEGHG 262
           +++++G  + VDGG +  T+   + +   
Sbjct: 245 ASFITGQSVDVDGGRSLYTHSYEVPDHDN 273

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  168 bits (426), Expect = 5e-52
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 18/260 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHC 62
           +  GKV ++ GA   IG ATA   AE G  + + D+  E   +  +S+  +  +A    C
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 61

Query: 63  DVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           DV  E+ V  TV   +  +G +D +++NAG  G    + D     F R +  N+ G+   
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 123 VKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRV 182
           +K  +R M+     G I+ T S A   G     AY  SK  ++ L  +AA +L  + IRV
Sbjct: 122 LKAVSRQMITQ-NYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVAN-----------LKGIVLK----AKHVAEAAL 227
           N +SP  +   F      +++  V                +  + ++       +     
Sbjct: 181 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240

Query: 228 FLASDESAYVSGHDLVVDGG 247
           FL  D+S++++G +L + GG
Sbjct: 241 FLLGDDSSFMTGVNLPIAGG 260

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 6e-52
 Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 15/251 (5%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GKV I+  AA GIG+A A  FA  GA VI  DI +    ++    G      R  DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG---IQTRVLDV 59

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
             +KQ+++           LD++++ AG     GT+LD +   +D ++  N+    + +K
Sbjct: 60  TKKKQIDQFANEVER----LDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGKHGIRVN 183
                M+A    G+II  +S AS+V G      Y+ +K  ++GL +S A++  + GIR N
Sbjct: 115 AFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLK-----GIVLKAKHVAEAALFLASDESAYVS 238
           CV P  V TP     I           +       G    A+ +A   ++LASDESAYV+
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 239 GHDLVVDGGFT 249
           G+ +++DGG++
Sbjct: 234 GNPVIIDGGWS 244

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  165 bits (418), Expect = 7e-51
 Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 6/253 (2%)

Query: 1   MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPE--KA 57
           M K  L+GKV +I G+++G+G++ A  FA   A V++     E   N V+  I     +A
Sbjct: 1   MYK-DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA 59

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLA 117
                DV  E  V   V  AI+++G LD+M +NAG+  P  +  ++ ++ +++ I TNL 
Sbjct: 60  IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLT 118

Query: 118 GSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK 177
           G+ +  + A +  V N I+G++I  +S    +       Y  SK G+  +  + A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAY 236
            GIRVN + P  + TP +A    D E      + +  G + + + +A  A +LAS E++Y
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238

Query: 237 VSGHDLVVDGGFT 249
           V+G  L  DGG T
Sbjct: 239 VTGITLFADGGMT 251

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  164 bits (417), Expect = 1e-50
 Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 14/256 (5%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVR 65
            +VA++ GA SGIG   A+   + G  V +    +E     +  +     +A  R CDVR
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
              ++E  VA  +E+YG +D++ +NAG  G  G   +L    +   + TNL G     K 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRSAASELGKHGIRVNC 184
             +     +     I   ++     G      Y+ SKHG++G  ++   EL + GI VN 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLK----AKHVAEAALFLASDES 234
           V P  V TP +A                        + +        VAE   +L    +
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240

Query: 235 AYVSGHDLVVDGGFTA 250
           A V+   L V GG   
Sbjct: 241 AAVTAQALNVCGGLGN 256

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  164 bits (417), Expect = 1e-50
 Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 20/264 (7%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI-QDELGNQVVSSIGPE--KAS 58
               L+GKVA++ GA  GIG   A      G  VI+      E   +VV++I      A+
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 71

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               +V   + +      A++ +G LDI+ SN+GV      + D+   +FDR    N  G
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG-HVKDVTPEEFDRVFTINTRG 130

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY-TISKHGLLGLVRSAASELGK 177
                + A +     +I G +I   S          HA  + SK  +    R  A ++  
Sbjct: 131 QFFVAREAYK---HLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMAD 187

Query: 178 HGIRVNCVSPFGVATPFSAGTINDV--------EGFVCKVANLKGIVLK----AKHVAEA 225
             I VN V+P G+ T        +            V + A ++   L+       +A  
Sbjct: 188 KKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247

Query: 226 ALFLASDESAYVSGHDLVVDGGFT 249
             FLAS++  +V+G  + +DGG  
Sbjct: 248 VCFLASNDGGWVTGKVIGIDGGAC 271

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 26/257 (10%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRHCD 63
           GKVA++ GAA GIG A A+     GA V + D   E G Q  +++     P+K  +  CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
           V D++Q+ +T    ++ +G LDI+ +NAGV          +   +++T+  NL   +   
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGT 113

Query: 124 KYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSA--ASELGKHG 179
                 M        G II  +S A  +  +    Y  SKHG++G  RSA  A+ L   G
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 180 IRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLK-----GIVLKAKHVAEAALFLASD 232
           +R+N + P  V T        +  +  ++    ++K       +L    +A   + L  D
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 233

Query: 233 ESAYVSGHDLVVDGGFT 249
           +   ++G  + +     
Sbjct: 234 D--ALNGAIMKITTSKG 248

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  161 bits (409), Expect = 1e-49
 Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 12/253 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
           RL GK A+I G+A GIG A A+ +   GA V IADI  E      + IGP  A     DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP-AACAIALDV 60

Query: 65  RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            D+  ++  VA  ++++GS+DI+ +NA +      I+++    +DR  A N++G++  ++
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNNAALFDL-APIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNC 184
             AR M+A    G II   S A   G +    Y  +K  ++ L +SA   L +HGI VN 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179

Query: 185 VSPFGVATPFSAGTINDVEGFVCKVANLK----------GIVLKAKHVAEAALFLASDES 234
           ++P  V      G       +       K          G + +A+ +   A+FLA+ E+
Sbjct: 180 IAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEA 239

Query: 235 AYVSGHDLVVDGG 247
            Y+      VDGG
Sbjct: 240 DYIVAQTYNVDGG 252

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  160 bits (406), Expect = 3e-49
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 4/246 (1%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
            +GK+A++ GA+ GIG A A+  A  GA VI     +     +   +G         +V 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVT 60

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D   +E  +     ++G +DI+ +NAG+      +  +   +++  I TNL+      K 
Sbjct: 61  DPASIESVLEKIRAEFGEVDILVNNAGITRDNLLM-RMKDEEWNDIIETNLSSVFRLSKA 119

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
             R M+  +  G II   S   T+G  G   Y  +K GL+G  +S A E+   GI VN V
Sbjct: 120 VMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVV 178

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P  + T  +    +D    +       G +  A+ +A A  FLASDE+AY++G  L V+
Sbjct: 179 APGFIETDMTRALSDDQRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAYITGETLHVN 237

Query: 246 GGFTAV 251
           GG   V
Sbjct: 238 GGMYMV 243

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  160 bits (406), Expect = 5e-49
 Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 21/262 (8%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIGPE--KAS 58
           SKP L GKVA+  GA  GIG   A      GA V++      +   +VV+ +     +  
Sbjct: 1   SKP-LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV 59

Query: 59  YRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAG 118
               D+    +V      A+  +G LD + SN+G+       L++    FD+    N  G
Sbjct: 60  AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW-CDELEVTQELFDKVFNLNTRG 118

Query: 119 SVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY-TISKHGLLGLVRSAASELGK 177
                +   +        G II T+S A+ + G   HA    SK  + G  R+ A + G 
Sbjct: 119 QFFVAQQGLKHCRRG---GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 175

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI------------VLKAKHVAEA 225
            G+ VNC++P GV T               K    + I            +     +  A
Sbjct: 176 KGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 235

Query: 226 ALFLASDESAYVSGHDLVVDGG 247
              L  +ES +++G  + + GG
Sbjct: 236 VSALCQEESEWINGQVIKLTGG 257

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  157 bits (397), Expect = 6e-48
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 15/245 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR 65
           ++ K  +++ A+ GIG A A + ++ GA V I    +EL  +           Y  CD+R
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLR 54

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            +      +    EK   +DI+  NAG     G   +L    F   I +     +  V+ 
Sbjct: 55  KD------LDLLFEKVKEVDILVLNAGGPKA-GFFDELTNEDFKEAIDSLFLNMIKIVRN 107

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
               M      G I+  TS +        +    ++  L G +++ + E+  +GI VNCV
Sbjct: 108 YLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 166

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD 245
           +P    T      +++ +    +       + K + +A    FL S++++Y++G  +VVD
Sbjct: 167 APGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVD 226

Query: 246 GGFTA 250
           GG + 
Sbjct: 227 GGLSK 231

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  156 bits (396), Expect = 1e-47
 Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 17/260 (6%)

Query: 6   LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV----SSIGPEKASYRH 61
           L+GKVA++ G+ SGIG   A   A  GA +++    D    + V    ++    K  Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+   + V   V  A+ + G +DI+  N         I D    ++D  +A NL+    
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILV-NNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
               A   M      G II   S    V  +   AY  +KHG++G  +  A E    GI 
Sbjct: 121 GTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 182 VNCVSPFGVATPFSAGTINDV-------EGFVCKVANLKGIVLK----AKHVAEAALFLA 230
            N + P  V TP     I+ +       +    +    +          + +   A+FLA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 231 SDESAYVSGHDLVVDGGFTA 250
           SD +A ++G  + VDGG+TA
Sbjct: 240 SDAAAQITGTTVSVDGGWTA 259

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  154 bits (390), Expect = 5e-47
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 12/246 (4%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH 61
           +KP    +  ++ G   GIG A A+  A  G  V +                P+      
Sbjct: 1   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGLFGVE 51

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            DV D   V+       E  G ++++ SNAG+      ++ +   +F++ I  NL G+  
Sbjct: 52  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL-SADAFLMRMTEEKFEKVINANLTGAFR 110

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
             + A+R M  NK  G +I   S +   G      Y  SK G++G+ RS A EL K  + 
Sbjct: 111 VAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 169

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
            N V+P  + T  +      ++    +    K +      VA    FLAS++++Y+SG  
Sbjct: 170 ANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG-TPAEVAGVVSFLASEDASYISGAV 228

Query: 242 LVVDGG 247
           + VDGG
Sbjct: 229 IPVDGG 234

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  153 bits (388), Expect = 1e-46
 Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 7/245 (2%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVR 65
            V ++ GA+ GIG+A A    + G  V++   +  +   +V   I     +A     DV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
            E  VE  +  AI+ +G++D++ +NAG+      ++ +  +Q+D  I  NL G  +  + 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGI-TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCV 185
           A ++M+  + +G II   S    +G  G   Y  +K G++G  ++AA E     I VN V
Sbjct: 121 ATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 186 SPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA-SDESAYVSGHDLVV 244
            P  +A+  +A    D+E  +     L G   + ++VA    FLA S  ++Y++G    +
Sbjct: 180 CPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITGQAFTI 238

Query: 245 DGGFT 249
           DGG  
Sbjct: 239 DGGIA 243

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (387), Expect = 2e-46
 Identities = 48/246 (19%), Positives = 91/246 (36%), Gaps = 8/246 (3%)

Query: 3   KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYR 60
           +  + G++ +I GA  GIG  TA  FA+  + +++ DI      +  +       K    
Sbjct: 2   RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             D  + + +  +      + G + I+ +NAGV      +      Q ++T   N+    
Sbjct: 62  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAHF 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK--- 177
              K     M  N   G I+   S A  V      AY  SK   +G  ++   EL     
Sbjct: 121 WTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 179

Query: 178 HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV 237
            G++  C+ P  V T F       + G   +   +   ++      +  +F+ S  +   
Sbjct: 180 TGVKTTCLCPNFVNTGFIKNPSTSL-GPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLT 238

Query: 238 SGHDLV 243
           +   ++
Sbjct: 239 TLERIL 244

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  153 bits (387), Expect = 3e-46
 Identities = 44/252 (17%), Positives = 76/252 (30%), Gaps = 17/252 (6%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE---KASYRH 61
            L  K  I + A  GIG  T++   +      +   + E    +            ++  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 62  CDV-RDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            DV     + ++ +    ++  ++DI+ + AG          LD  Q +RTIA N  G V
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLV 112

Query: 121 MAVKYAARVMVANKI--RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKH 178
                        K    G I    S            Y+ SK  ++    S A      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 179 GIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS 238
           G+    ++P    TP      + ++        L     +           A    A  +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI--EANKN 230

Query: 239 GHDLVVDGGFTA 250
           G    +D G   
Sbjct: 231 GAIWKLDLGTLE 242

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  151 bits (382), Expect = 2e-45
 Identities = 78/253 (30%), Positives = 106/253 (41%), Gaps = 13/253 (5%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           KVA++ GA  GIG+A A    + G  V IAD  D     V S I      A     DV D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             QV   V  A +  G  D++ +NAGV  P   I  +     D+    N+ G +  ++ A
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGV-APSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
                     G II   S A  VG      Y+ SK  + GL ++AA +L   GI VN   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 187 PFGVATPFSAGTINDVEGFVCKVANLK----------GIVLKAKHVAEAALFLASDESAY 236
           P  V TP  A     V     K               G + + + VA    +LAS +S Y
Sbjct: 181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240

Query: 237 VSGHDLVVDGGFT 249
           ++G  L++DGG  
Sbjct: 241 MTGQSLLIDGGMV 253

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  148 bits (374), Expect = 1e-44
 Identities = 64/248 (25%), Positives = 96/248 (38%), Gaps = 19/248 (7%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
           + A++ G ASG+G A A      G  V++ D++ E           E   Y   DV  E+
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----------GEDLIYVEGDVTREE 51

Query: 69  QVEETVAYAIEKYGSLD--IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
            V   VA A E+                  +G      +  F R +  NL G+   ++ A
Sbjct: 52  DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 111

Query: 127 ARVMVAN-----KIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIR 181
           A  M  N       RG I+ T S A+  G  G  AY  SK G++ L   AA EL   GIR
Sbjct: 112 AWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIR 171

Query: 182 VNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD 241
           V  V+P    TP   G     +  +         + + +  A   L +  +    ++G  
Sbjct: 172 VVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEV 229

Query: 242 LVVDGGFT 249
           + +DG   
Sbjct: 230 VRLDGALR 237

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (371), Expect = 7e-44
 Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 10/258 (3%)

Query: 1   MSKPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KA 57
           M    L GK A++MG  +   +G A A    E GA V ++   + L  +          A
Sbjct: 1   MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA 60

Query: 58  SYRHCDVRDEKQVEETVAYAIEKYGSLDI---MYSNAGVAGPVGTILDLDMAQFDRTIAT 114
                DV  +++++   A   E +G LD      + A      G  +D     +   +  
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 115 NLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASE 174
           +    V   + A  ++      G I+  T  AS       +   I+K  L   VR  A E
Sbjct: 121 SAYSLVAVARRAEPLLREG---GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177

Query: 175 LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDE 233
           LG  G+RVN +S   V T  +       + +            +  + V    LFL S  
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237

Query: 234 SAYVSGHDLVVDGGFTAV 251
           ++ ++G  + VD G+  +
Sbjct: 238 ASGITGEVVYVDAGYHIM 255

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  139 bits (352), Expect = 3e-41
 Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 23/250 (9%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDELGNQVVSSIGPE--KASY 59
            + +I GA  GIG A A  FA            ++++        ++      E      
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 60  RHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
              D+ D   V     + +E+YG +D +  N    G  G + DL    FD T+ TNL G+
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLV-NNAGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
               +    +M      G I   TS A+T        Y +SK G  GLV +      K  
Sbjct: 121 FFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG 239
           +R+  V P  V TP      +++          + +++  + +A   +      S  V  
Sbjct: 180 VRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVVE 229

Query: 240 HDLV--VDGG 247
             ++    G 
Sbjct: 230 EIILRPTSGD 239

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  139 bits (350), Expect = 9e-41
 Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 26/263 (9%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV----SSIGPEKASYRHCDVR 65
            A+I G A  IG + A    + G  V++     E   Q +    ++     A     D+ 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 66  D----EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFD-----------R 110
                    E+ +  +   +G  D++ +NA    P   +L  D                 
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAE 121

Query: 111 TIATNLAGSVMAVKYAARVMVANKIRGSIICTT----STASTVGGSGPHAYTISKHGLLG 166
              +N    +  ++  AR         S   +        + +   G   YT++KH L G
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAA 226
           L R+AA EL    IRVN V+P     P       + +    +   L      A  +A+A 
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASAAQIADAI 239

Query: 227 LFLASDESAYVSGHDLVVDGGFT 249
            FL S ++ Y++G  L VDGG  
Sbjct: 240 AFLVSKDAGYITGTTLKVDGGLI 262

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 1e-39
 Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 18/248 (7%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRH 61
            LQGK  I+ GA+ GIG   A   A+ GA V++     E   +VVS     G   A Y  
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
             + D    E+ VA A +  G LD++  N         +   D+    +++  N    V+
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHI-TNTSLNLFHDDIHHVRKSMEVNFLSYVV 129

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KHG 179
               A  ++  +   GSI+  +S A  V      AY+ SK  L G   S   E    +  
Sbjct: 130 LTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGF------VCKVANLKGIVLKAKHV----AEAALFL 229
           + +       + T  +   ++ +          C +  +KG  L+ + V    +     L
Sbjct: 188 VSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLL 247

Query: 230 ASDESAYV 237
             + S  +
Sbjct: 248 IRNPSRKI 255

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  134 bits (338), Expect = 5e-39
 Identities = 44/258 (17%), Positives = 88/258 (34%), Gaps = 21/258 (8%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAE---HGAFVIIADIQDELGNQVVSSIGPE----KA 57
            L   V ++ GA+ G G A A   A     G+ ++++   + +  Q+   +G +    K 
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 58  SYRHCDVRDEKQVEETVAYAIE----KYGSLDIMYSNAGVAG--PVGTILDLDMAQFDRT 111
                D+  E  V+  ++   E    +     ++ +NA   G    G +   D+A+ +  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 112 IATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLVRS 170
            A NL   +            +      +   S+   +        Y   K     L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 171 AASELGKHGIRVNCVSPFGVATPFSAGTINDV--EGFVCKVANLK--GIVLKAKHVAEAA 226
            A+E  +  +RV   +P  +                   K+  LK  G ++     A+  
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 227 LFLASDESAYVSGHDLVV 244
           L L   ++ + SG  +  
Sbjct: 241 LGLLQKDT-FQSGAHVDF 257

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  132 bits (332), Expect = 4e-38
 Identities = 54/252 (21%), Positives = 93/252 (36%), Gaps = 5/252 (1%)

Query: 5   RLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE-KASYRH 61
            L GK  ++ G AS   I    A+     GA +      D+L  +V              
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
           CDV ++  ++   A   + +   D    + G A       D   A            S  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 122 AVKYAARVMVANKIRG-SIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
           +    A+   +    G +++  +   +       +   ++K  L   VR  A+ +G  G+
Sbjct: 122 SFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGV 181

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSG 239
           RVN +S   + T  ++G  +  +      A       +  + V  +A FL SD SA +SG
Sbjct: 182 RVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG 241

Query: 240 HDLVVDGGFTAV 251
             + VDGGF+  
Sbjct: 242 EVVHVDGGFSIA 253

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 1e-37
 Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 11/249 (4%)

Query: 5   RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV 64
            ++G VA+I G ASG+G ATA+     GA  ++ D+ +  G      +G           
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 65  RDEKQVEETVAYAIEKYGS----LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
            ++           +             + A     +       +  F R +  NL G+ 
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 121 MAVKYAARVMVANKI-----RGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASEL 175
             ++  A  M  N+      RG II T S A+  G  G  AY+ SK G++G+    A +L
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA 235
              GIRV  ++P    TP        V  F+         +      A     +    + 
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NP 239

Query: 236 YVSGHDLVV 244
           +++G  + +
Sbjct: 240 FLNGEVIRL 248

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  126 bits (318), Expect = 5e-36
 Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 20/209 (9%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFV-IIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
               ++ GA  GIG    +   +      IIA  +D      + SI   +       V  
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 67  EKQVEETVAYAIEKYGS--LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
           +K ++  V+   E  GS  L ++ +NAGV    GT  + + A     +  N    V+  +
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 125 YAARVMVANKIRGSI-----------------ICTTSTASTVGGSGPHAYTISKHGLLGL 167
               ++     + S                     T   S        AY +SK  +   
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 168 VRSAASELGKHGIRVNCVSPFGVATPFSA 196
            R+ A +L    + V    P  V T    
Sbjct: 183 GRTLAVDLKDDNVLVVNFCPGWVQTNLGG 211

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  126 bits (317), Expect = 7e-36
 Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 6/252 (2%)

Query: 5   RLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYR 60
            L+GK  +I+G A+   I    A+     GA +    + + L  + V  I  E       
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRVRPIAQELNSPYVY 60

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DV  E+  +       +  GSLD +  +   A        L                 
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++    +        S++  +   ST   +  +   ++K  L   VR  A +LGKH I
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

Query: 181 RVNCVSPFGVATPFSAGTINDVEGFVCKVANLK-GIVLKAKHVAEAALFLASDESAYVSG 239
           RVN +S   + T  S+G  +          N      +  + V  A ++L S  S+ VSG
Sbjct: 181 RVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG 240

Query: 240 HDLVVDGGFTAV 251
               VD G+  +
Sbjct: 241 EVHFVDAGYHVM 252

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  123 bits (310), Expect = 4e-35
 Identities = 36/252 (14%), Positives = 75/252 (29%), Gaps = 26/252 (10%)

Query: 7   QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD 66
           + +  ++ G    +G    + F     +V   D+ +              +         
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--------EEASASVIVKMTDSF 52

Query: 67  EKQVEETVAYAIEKYGS--LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVK 124
            +Q ++  A   +  G   +D +   AG                D     ++  S ++  
Sbjct: 53  TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 125 YAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELG--KHGIRV 182
            A       K  G +    + A+  G  G   Y ++K  +  L +S A +      G   
Sbjct: 113 LA---TKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169

Query: 183 NCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL 242
             V P  + TP +  ++ + +                + + E      +      SG  +
Sbjct: 170 IAVLPVTLDTPMNRKSMPEAD---------FSSWTPLEFLVETFHDWITGNKRPNSGSLI 220

Query: 243 VV--DGGFTAVT 252
            V    G T +T
Sbjct: 221 QVVTTDGKTELT 232

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 7e-33
 Identities = 49/281 (17%), Positives = 87/281 (30%), Gaps = 70/281 (24%)

Query: 9   KVAIIMGAASGIGEATAKLFA-EHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVR 65
            VA++ G   GIG A  +         V++       G   V  +  E     +   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D + +     +  ++YG LD++ +NAG+A            Q + T+ TN  G+      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 126 AARVMVANKIRGSIICTTSTASTVG----------------------------------- 150
              ++   K +G ++  +S  S                                      
Sbjct: 123 LLPLI---KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 151 ------GSGPHAYTISKHGLLGLVRSAASELGKH----GIRVNCVSPFGVATPFSAGTIN 200
                 G    AY ++K G+  L R  A +L +      I +N   P  V T  +     
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-- 237

Query: 201 DVEGFVCKVANLKGIVLKAKHVAEAALFLA--SDESAYVSG 239
                              +  AE  ++LA    ++    G
Sbjct: 238 --------------ATKSPEEGAETPVYLALLPPDAEGPHG 264

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  114 bits (286), Expect = 2e-31
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 37/265 (13%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK 68
            + +I G A+GIG AT K+    G  ++  DI+D                    D+   +
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---------------EVIADLSTAE 46

Query: 69  QVEETVAYAIEKY-GSLDIMYSNAGVAGP---VGTILDLDMAQFDRT------------- 111
             ++ +A  + K    +D +   AG+      +G ++ ++                    
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106

Query: 112 --IATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH-AYTISKHGLLGLV 168
                  + +   + +    +      G      +     G  G + AY  SK+ L   V
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166

Query: 169 RSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF--VCKVANLKGIVLKAKHVAEAA 226
           R  A+  G+ G+R+N ++P    TP     + D      + K     G   +   +A   
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVI 226

Query: 227 LFLASDESAYVSGHDLVVDGGFTAV 251
            FL S  ++YV G  +V+DGG  AV
Sbjct: 227 AFLMSPAASYVHGAQIVIDGGIDAV 251

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 5e-29
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 31/262 (11%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADI------QDELGNQVVSSIG--PEKASYR 60
            V +I G +SGIG   A   A   +                   +   ++   P      
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             DVRD K V        E    + +  +  G+ GP+  +           +  N+ G+V
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEAL---GEDAVASVLDVNVVGTV 119

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
             ++     M      G ++ T S    +G      Y  SK  L GL  S A  L   G+
Sbjct: 120 RMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 181 RVNCVSPFGVATPFSAGTINDVE------------GFVCKVANLKGIVLKA----KHVAE 224
            ++ +    V T F    +   E             F   +A+ K +  +A    + VAE
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 225 AALFLASDESA---YVSGHDLV 243
             L           Y +    +
Sbjct: 239 VFLTALRAPKPTLRYFTTERFL 260

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  108 bits (271), Expect = 5e-29
 Identities = 63/280 (22%), Positives = 99/280 (35%), Gaps = 43/280 (15%)

Query: 10  VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS------------------ 51
           VA++ GAA  +G + A+     G  V +   +       +S+                  
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 52  ---IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQF 108
                P   +     V    +  E VA     +G  D++ +NA    P   +L  D    
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRNDEDGH 122

Query: 109 DRT--------------IATNLAGSVMAVKYAARVMVANKIR-----GSIICTTSTASTV 149
           +                  +N       +K  A  +     +      SII      +  
Sbjct: 123 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 182

Query: 150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKV 209
              G   YT++K  L GL RSAA EL    IRVN V   G++           EG   KV
Sbjct: 183 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG-PGLSVLVDDMPPAVWEGHRSKV 241

Query: 210 ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT 249
             L      A  V++  +FL S ++ Y++G  + VDGG++
Sbjct: 242 P-LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  105 bits (263), Expect = 5e-28
 Identities = 53/264 (20%), Positives = 94/264 (35%), Gaps = 17/264 (6%)

Query: 5   RLQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC 62
            L GK  ++ G    S I    A++  E GA +++         Q ++   P KA     
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 63  DVRDEKQ---VEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGS 119
           DV++E+    +   V  AI     LD +  + G     G  ++         ++  +  S
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 120 VMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHG 179
             +    A+ ++     G  I       +      +  T++K  L  + R  A E GK+G
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 180 IRVNCVSPFGVATPFSAGTINDVEGF------------VCKVANLKGIVLKAKHVAEAAL 227
           +R N V+   + T   +  +    G               + A +   +  A  VA+   
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 228 FLASDESAYVSGHDLVVDGGFTAV 251
            L SD     +G  +  DGG    
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQ 266

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  103 bits (258), Expect = 2e-27
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 28/252 (11%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE 67
           GKV I+ G    +G A  + F ++G  V+  D+              +       +    
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAND--------QADSNILVDGNKNWT 53

Query: 68  KQVEETVAYAIE--KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           +Q +  +       +   +D ++  AG            +   D  I  ++  S +A K 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGK--HGIRVN 183
                   K  G +  T + A+         Y ++K  +  L  S A++         V 
Sbjct: 114 ---ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 170

Query: 184 CVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAAL-FLASDESAYVSGHDL 242
            + P  + TP +   + + +                  ++E  L +     S   SG  L
Sbjct: 171 TIMPVTLDTPMNRKWMPNAD---------HSSWTPLSFISEHLLKWTTETSSRPSSGALL 221

Query: 243 VV--DGGFTAVT 252
            +  + G + +T
Sbjct: 222 KITTENGTSTIT 233

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 43/259 (16%), Positives = 81/259 (31%), Gaps = 37/259 (14%)

Query: 9   KVAIIMGAASGIGEATAKLF---AEHGAFVIIADIQDELGNQVVSSI-GPEKASYRHCDV 64
              +I G   G+G    K      +    +       E   ++               D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 65  RDEKQVEE--TVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA 122
           R+    ++       + K   L+++++NAG+A     I  +   +   T+ TN    +M 
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 123 VKYAARVMVANK----------IRGSIICTTSTASTVGG---SGPHAYTISKHGLLGLVR 169
            K    ++               R +II  +S   ++ G    G +AY  SK  L    +
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 170 SAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALF 228
           S + +L    I    + P  V T     +   DV                   + +    
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPT-------------STGQIVQTISK 229

Query: 229 LASDESAYVSGHDLVVDGG 247
           L   +    +G  +  DG 
Sbjct: 230 LGEKQ----NGGFVNYDGT 244

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.6 bits (233), Expect = 3e-23
 Identities = 45/327 (13%), Positives = 88/327 (26%), Gaps = 84/327 (25%)

Query: 7   QGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVS-------------- 50
              +  I G     G G   AK  ++    +I           + +              
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 51  --------------------SIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN 90
                                I  E  + +  ++     +E+      +KYG ++++  +
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 91  AGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV 149
              A  V   +L+     +   ++ +    +   KY   +M       S+    S     
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 150 GGSGPHAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGTINDVEGFVCK 208
           G  G    + +K  L    R  A  LG+ + IR+N +S   + +  +         +   
Sbjct: 181 GYGG--GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238

Query: 209 VANLK--------------------------------------------GIVLKAKHVAE 224
               K                                               L +  +  
Sbjct: 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGS 298

Query: 225 AALFLASDESAYVSGHDLVVDGGFTAV 251
            A FL S ES  ++G  + VD G   +
Sbjct: 299 VASFLLSRESRAITGQTIYVDNGLNIM 325

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 90.2 bits (222), Expect = 6e-22
 Identities = 50/285 (17%), Positives = 88/285 (30%), Gaps = 39/285 (13%)

Query: 5   RLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHC 62
            L+GK A I G A   G G A AK  A  GA +++      L     S    +    R  
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 63  ----------------------------------DVRDEKQVEETVAYAIEKYGSLDIMY 88
                                                    V+E      + +GS+DI+ 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 89  SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST 148
            +      V   L     +      +  + S +++      ++        +   ++   
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 149 VGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK 208
           + G G    +            A     K  IRVN +S   + +  +   I  ++  +  
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA-IGFIDTMIEY 243

Query: 209 VANLK--GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV 251
             N       L A  V  AA FL S  ++ ++G  + VD G  ++
Sbjct: 244 SYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 68.4 bits (166), Expect = 1e-14
 Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 14/180 (7%)

Query: 2   SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYR 60
           +   ++GK A+++     +G  +A L A  GA V++   + +       S+    K +  
Sbjct: 17  AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVT 76

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
             +  D+    E V            +++   +      +  L  A +    +  +    
Sbjct: 77  AAETADDASRAEAV-------KGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADY 124

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGI 180
            A        +    +G           + G G     + +  +  L  S+        I
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 13/190 (6%)

Query: 8   GKVAIIMGAASGIGEATAKLFAEHGAFVII----ADIQDELGNQVVSSIGPEKASYRHCD 63
               ++ G   G+G   A+  A  GA  ++    +    +   ++V+ +    A      
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 64  VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAV 123
                +                    +A      GT+  L   + +R     + G+    
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 124 KYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVN 183
           +    + +        +  +S AS  G  G   Y      L GL    A +    G+   
Sbjct: 129 ELTRELDLTA-----FVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPAT 179

Query: 184 CVSPFGVATP 193
            V+    A  
Sbjct: 180 AVAWGTWAGS 189

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 59.7 bits (143), Expect = 2e-11
 Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 5/186 (2%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--KASYRHCDVRD 66
           +VA++ G    +G+  A   A  G  +++   ++E      +        AS       D
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 67  EKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYA 126
             +  +     I    ++D              ++   +           +    A +  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDL-KNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 127 ARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
           A V+ + K+  S + T   A          + +   G     +     L      +  + 
Sbjct: 120 AEVLESEKVV-SALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 187 PFGVAT 192
              ++ 
Sbjct: 179 AGPLSN 184

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 26/205 (12%), Positives = 54/205 (26%), Gaps = 36/205 (17%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN--------QVVSSIGPEKASYR 60
            VA+I G     G   A+   E G  V     +    N        +   +         
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 61  HCDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSV 120
           + D+ D   + +     I +    +I    A         + +     + T   +  G++
Sbjct: 62  YGDLTDSTCLVK----IINEVKPTEIYNLGAQSH------VKISFDLAEYTADVDGVGTL 111

Query: 121 MAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH------------AYTISKHGLLGLV 168
             +       + N ++       ST+   G                  Y  +K     +V
Sbjct: 112 RLLDAVKTCGLINSVK---FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV 168

Query: 169 RSAASELGKHGIRVNCVSPFGVATP 193
            +       + +       F   +P
Sbjct: 169 VNFRE---AYNLFAVNGILFNHESP 190

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 35/204 (17%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-------QVVSSIGPEKASYRH 61
           KVA+I G     G   A+   E G  V     +    N                K    +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 62  CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVM 121
            D+ D   +   +     +    D +Y+   ++    +         + T   +  G++ 
Sbjct: 62  GDLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVSFES-----PEYTADVDAMGTLR 111

Query: 122 AVKYAARVMVANKIRGSIICTTSTASTVGGSGPH------------AYTISKHGLLGLVR 169
            ++    + +  K R       ST+   G                  Y ++K     +  
Sbjct: 112 LLEAIRFLGLEKKTR---FYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITV 168

Query: 170 SAASELGKHGIRVNCVSPFGVATP 193
           +       +G+       F   +P
Sbjct: 169 NYRE---SYGMYACNGILFNHESP 189

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 24/211 (11%)

Query: 9   KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHCDVR 65
           K+ ++ G A  IG  T     E+G   ++AD         V+    +      +   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 66  DEKQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKY 125
           D K +E+     + K   +D +   AG+                R    N+ G+V+ ++ 
Sbjct: 62  DRKGLEK-----VFKEYKIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLEL 111

Query: 126 AARVMVANKIRGSIICTTSTASTVGGSGPH----------AYTISKHGLLGLVRSAASEL 175
             +  V+  +  S       A+      P            Y  +K+ +  ++       
Sbjct: 112 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILND-LYNS 170

Query: 176 GKHGIRVNCVSPFGVATPFSAGTINDVEGFV 206
            K   +   +  F       +G I +    +
Sbjct: 171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGI 201

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.8 bits (87), Expect = 8e-04
 Identities = 36/210 (17%), Positives = 63/210 (30%), Gaps = 41/210 (19%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIA-DIQDELGN--QVVSSIGPEKASYRHCDVRDEK 68
           +I G A  IG A  +   ++    ++  D     GN   +       + ++ H D+ D  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAAR 128
           ++       I +    D +   A  +       D  +      I TN+ G+   ++ A +
Sbjct: 64  EITR-----IFEQYQPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARK 113

Query: 129 VMVANKIRGSIICTTSTAST--VGGSGPH-----------------------AYTISKHG 163
              A              ST  V G  PH                        Y+ SK  
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKAS 173

Query: 164 LLGLVRSAASELGKHGIRVNCVSPFGVATP 193
              LVR+       +G+     +      P
Sbjct: 174 SDHLVRAWRR---TYGLPTIVTNCSNNYGP 200

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 3/72 (4%)

Query: 1  MSKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKAS 58
          ++    QGK   + G     G   +      GA V    +        +       +   
Sbjct: 1  INNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-TAPTVPSLFETARVADGMQ 59

Query: 59 YRHCDVRDEKQV 70
              D+RD+ ++
Sbjct: 60 SEIGDIRDQNKL 71

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 12/200 (6%)

Query: 12  IIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYRHCDVRDEK 68
           ++ G +  IG  T     ++G  VII D        V   +  +G +  ++   D+R+E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 69  QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILD-LDMAQFDRTIATNLAGSVMAVKYAA 127
            + E     I    ++D +   AG+     ++   L+    +      L  ++ A     
Sbjct: 64  LMTE-----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 128 RVMVAN-KIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVS 186
            +  ++  + G         S   G+    Y  SK  +  ++        +    +  + 
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKA--QPDWSIALLR 176

Query: 187 PFGVATPFSAGTINDVEGFV 206
            F       +G + +    +
Sbjct: 177 YFNPVGAHPSGDMGEDPQGI 196

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	262
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.88
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.82
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.81
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.8
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.79
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.78
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.78
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.78
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.77
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.76
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.76
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.76
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.75
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.74
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.74
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.69
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.68
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.66
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.49
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.45
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.42
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.39
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.28
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.25
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.99
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.17
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.13
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.09
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.06
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.03
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.85
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.85
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.78
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.71
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.65
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.64
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.62
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.57
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.56
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.53
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.51
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.5
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.48
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.47
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.45
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.45
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.36
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.36
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.35
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.3
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.3
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.28
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.28
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.2
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.16
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.15
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.13
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.12
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.12
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.11
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.1
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.05
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.01
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.01
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.98
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.97
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.97
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.94
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.92
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.9
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.9
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.85
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.85
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.82
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.8
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.74
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.72
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.7
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.65
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.58
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.58
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.42
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.41
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.4
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.39
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.39
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.39
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.37
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.33
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.11
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.04
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.02
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.01
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.77
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.76
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.75
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.75
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.74
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.72
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.67
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.66
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.41
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.25
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.24
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.22
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.21
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.16
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.15
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.95
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.92
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.77
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.76
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.73
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.58
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.39
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.38
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.37
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.28
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.26
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.19
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.18
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.16
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.89
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.85
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.77
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.72
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.69
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.67
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.67
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.6
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.52
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.42
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.4
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.39
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.39
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	93.36
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.31
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.3
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.27
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.24
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.22
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.18
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.11
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.1
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.09
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.81
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.72
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.65
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.33
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.24
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.15
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.8
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.79
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.78
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.77
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.77
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.74
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.57
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.53
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.49
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	91.48
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.47
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.41
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.37
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.35
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	91.33
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.3
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.1
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.1
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.94
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.79
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.61
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.34
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.27
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.25
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.9
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.84
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.78
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.54
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	89.44
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.94
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	88.92
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.91
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.73
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.66
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	88.5
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	88.39
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.23
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	88.18
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	88.12
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.97
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	87.96
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.85
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	87.67
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.43
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.17
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.07
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.05
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.02
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	86.97
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.78
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.75
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	86.46
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.31
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	85.79
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.69
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.45
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.06
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.65
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	84.63
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.57
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.57
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	84.4
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.34
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	84.29
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	84.07
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.98
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.93
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.47
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	83.29
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.16
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.11
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.51
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	82.47
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	82.42
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	82.01
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	81.93
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	81.49
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	81.28
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.16
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.06
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	80.49
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	80.44
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.35
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	80.34
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.33
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.18

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-59  Score=384.58  Aligned_cols=242  Identities=30%  Similarity=0.466  Sum_probs=225.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.++++ .+...+++|++++++++++++++.++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            5889999999999999999999999999999999999999999888886 578899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||.. ...++.+.+.++|++++++|+.+++.++|+++|+|++++ .|+||++||..+..+.+..++|++||+|+
T Consensus        80 DilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal  157 (243)
T d1q7ba_          80 DILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGL  157 (243)
T ss_dssp             SEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             ceehhhhhhc-cccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHHHHH
Confidence            9999999986 568899999999999999999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      .+|+|+++.||+++|||||+|+||+++||+.....++..... ....|.+|+.+|+|||+++.||++++++|+|||+|.+
T Consensus       158 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~v  236 (243)
T d1q7ba_         158 IGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGI-LAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV  236 (243)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHH-HTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHH-HhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEE
Confidence            999999999999999999999999999999877655443332 3346889999999999999999999999999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||++|
T Consensus       237 dGG~~~  242 (243)
T d1q7ba_         237 NGGMYM  242 (243)
T ss_dssp             STTSSC
T ss_pred             CCCeEe
Confidence            999876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.2e-58  Score=381.31  Aligned_cols=246  Identities=30%  Similarity=0.451  Sum_probs=225.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. .++.++++|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999999999988888854 58899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||.. ...++.+++.++|++++++|+.++++++++++|+|++++..++||++||..+..+.+...+|+++|+|
T Consensus        83 iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaa  161 (251)
T d1zk4a1          83 VSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA  161 (251)
T ss_dssp             CCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             ceEEEeccccc-cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHH
Confidence            99999999987 56899999999999999999999999999999999987744599999999999999999999999999


Q ss_pred             HHHHHHHHHHH--HCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          164 LLGLVRSAASE--LGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       164 ~~~~~~~la~e--~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +.+|+|++|.|  ++++|||||+|+||+++||+.................|.+|+.+|+|||++++||+++.+.|+|||+
T Consensus       162 l~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  241 (251)
T d1zk4a1         162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE  241 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcE
Confidence            99999999998  5689999999999999999977665444443344456889999999999999999999999999999


Q ss_pred             EeeCCCcccc
Q 024839          242 LVVDGGFTAV  251 (262)
Q Consensus       242 i~~dgG~~~~  251 (262)
                      |.||||++.+
T Consensus       242 i~vDGG~ta~  251 (251)
T d1zk4a1         242 FVVDGGYTAQ  251 (251)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECcccccC
Confidence            9999999863

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.3e-58  Score=380.11  Aligned_cols=244  Identities=31%  Similarity=0.434  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH-HHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++. ++..+..+ .++.+++||++|+++++++++++.+++|
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC-CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999999986543 33334443 6789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|+||||||+. ...++.+++.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+...+|++||+
T Consensus        80 ~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          80 RCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             CCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhhc
Confidence            999999999986 668999999999999999999999999999999999987 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      |+.+|+|+|+.|++++|||||+|+||+++||+....... ..........|.+|+.+|+|||++++||+++.+.|+|||+
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~  237 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999997665322 2223333445788999999999999999999999999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.||||++.
T Consensus       238 i~vDGG~~~  246 (247)
T d2ew8a1         238 LAVDGGMVR  246 (247)
T ss_dssp             EEESSSCCC
T ss_pred             EEECCCEec
Confidence            999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4e-58  Score=375.93  Aligned_cols=239  Identities=35%  Similarity=0.570  Sum_probs=223.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .++.++++|++++++++++++++.+++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-CcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999999999888886 57889999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||.. ...++++++.++|++++++|+.++++++|.++|.|++++ .|+||++||..+..+.+...+|+++|+|
T Consensus        81 idilinnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaa  158 (244)
T d1nffa_          81 LHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFA  158 (244)
T ss_dssp             CCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CeEEEECCccc-CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHHHH
Confidence            99999999986 568899999999999999999999999999999999987 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.+|+|+++.||+++|||||+|+||+++||+.....+..      ...|.+|+.+|+|+|++++||+++.+.|+|||+|.
T Consensus       159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~  232 (244)
T d1nffa_         159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI------FQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  232 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC------SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH------HhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence            999999999999999999999999999999976543321      23588999999999999999999999999999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      ||||++..
T Consensus       233 vDGG~~ag  240 (244)
T d1nffa_         233 VDGGTVAG  240 (244)
T ss_dssp             ESTTGGGS
T ss_pred             ECCCeecc
Confidence            99999863

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.7e-58  Score=382.07  Aligned_cols=254  Identities=30%  Similarity=0.436  Sum_probs=223.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++..  .++.++++|++++++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999865 45555555532  57889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|+||||||+. ...++.+++.++|++++++|+.+++.++|+++|+|++++..+.||++||..+..+.+...+|++|
T Consensus        83 ~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as  161 (261)
T d1geea_          83 FGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             HSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCEeeccceec-CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence            99999999999987 55789999999999999999999999999999999988745579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      |+|+.+|+|+|+.|++++|||||+|+||+++||+....... ..........|.+|+.+|+|||++++||+++.+.|+||
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG  241 (261)
T d1geea_         162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999999999999999999999987543222 22222333468899999999999999999999999999


Q ss_pred             eEEeeCCCcccccCccccccCC
Q 024839          240 HDLVVDGGFTAVTNVMSMLEGH  261 (262)
Q Consensus       240 ~~i~~dgG~~~~~~~~~~~~~~  261 (262)
                      |+|.||||+++   +|.++.+.
T Consensus       242 ~~i~vDGG~sl---~p~~~~g~  260 (261)
T d1geea_         242 ITLFADGGMTL---YPSFQAGR  260 (261)
T ss_dssp             CEEEESTTGGG---CGGGGGGC
T ss_pred             CeEEECCCeeC---CCCCCCCC
Confidence            99999999988   45555443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-58  Score=381.48  Aligned_cols=244  Identities=33%  Similarity=0.423  Sum_probs=222.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++..  .++.+++||++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999998888877743  57899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++++|++|||||+. ...++ +.+.++|++++++|+.+++.++|.++|+|++++ .++||++||..+..+.+...+|++|
T Consensus        86 ~g~iDilvnnAG~~-~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~as  162 (255)
T d1fmca_          86 LGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEeeeCCcCC-CCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccchhH
Confidence            99999999999986 33454 789999999999999999999999999999987 8999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |+|+.+|+|+||.|++++|||||+|+||+++||+......+..........|.+|+.+|+|||++++||+++.+.|+|||
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~  242 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999999999987765444333333445688999999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 024839          241 DLVVDGGFT  249 (262)
Q Consensus       241 ~i~~dgG~~  249 (262)
                      +|.+|||+.
T Consensus       243 ~i~vDGG~~  251 (255)
T d1fmca_         243 ILTVSGGGV  251 (255)
T ss_dssp             EEEESTTSC
T ss_pred             EEEECcCcc
Confidence            999999984

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.4e-59  Score=383.74  Aligned_cols=248  Identities=27%  Similarity=0.362  Sum_probs=197.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..  .++.++.||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999998888877642  57899999999999999999999999


Q ss_pred             h-CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           81 Y-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        81 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      + +++|++|||||+. ...++.+.+.++|++++++|+.+++.++|+++|+|++++ .|+||++||..+..+.+...+|++
T Consensus        83 ~~g~idilvnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          83 FGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHH
T ss_pred             hCCCccccccccccc-CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccccccccccc
Confidence            8 6899999999987 567899999999999999999999999999999999887 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      +|+|+.+|+|++|.|++++|||||+|+||+++||+......+..........|.+|+.+|+|||++++||+++.++|+||
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG  240 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG  240 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999999999999999999999999876644433333334568899999999999999999999999999


Q ss_pred             eEEeeCCCccccc
Q 024839          240 HDLVVDGGFTAVT  252 (262)
Q Consensus       240 ~~i~~dgG~~~~~  252 (262)
                      |+|.+|||++++.
T Consensus       241 ~~i~vDGG~s~~g  253 (259)
T d1xq1a_         241 QTICVDGGLTVNG  253 (259)
T ss_dssp             CEEECCCCEEETT
T ss_pred             cEEEeCCCEECCC
Confidence            9999999999863

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5.6e-58  Score=378.45  Aligned_cols=246  Identities=32%  Similarity=0.444  Sum_probs=222.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.++++ .++.++++|++++++++++++++.+++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG-PAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            35889999999999999999999999999999999999999999998886 57899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|++|||||+. ...++.+++.++|++.+++|+.++++++|+++|.|.+++..|+||++||..+..+.+..++|++||+|
T Consensus        80 iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (256)
T d1k2wa_          80 IDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAA  158 (256)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             ccEEEeecccc-cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhH
Confidence            99999999987 56789999999999999999999999999999987765547999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      +.+|+|+++.||+++|||||+|+||+++||+......          ...........|.+|+.+|+|||++++||++++
T Consensus       159 l~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~  238 (256)
T d1k2wa_         159 VISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE  238 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999998643311          111122223458899999999999999999999


Q ss_pred             CCceeceEEeeCCCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~  251 (262)
                      +.|+|||+|.||||+.|+
T Consensus       239 a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         239 ADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GTTCCSCEEEESTTSSCC
T ss_pred             hCCccCceEEECcchhhC
Confidence            999999999999998774

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.7e-58  Score=380.45  Aligned_cols=245  Identities=29%  Similarity=0.473  Sum_probs=220.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++    ...++.+++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998887766655    2357899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      +|++|+||||||+.....++++++.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+...+|+++
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHHH
Confidence            999999999999876667899999999999999999999999999999999887 8999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----chHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DVEGFV--CKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |+|+.+|+|+|+.|++++|||||+|+||+++||+......     ......  .....|.+|+.+|+|+|++++||+++.
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999998643311     111111  222358899999999999999999999


Q ss_pred             CCceeceEEeeCCCccc
Q 024839          234 SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~  250 (262)
                      ++|+|||+|.||||++.
T Consensus       240 s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hcCCcCceEEcCcchhc
Confidence            99999999999999986

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3e-58  Score=378.90  Aligned_cols=243  Identities=27%  Similarity=0.409  Sum_probs=220.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +.+.||+||||||++|||+++|++|+++|++|++++|+++.++++.+++..  .++.++++|++++++++++++++.+++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999999999888887754  478999999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|++|||||.. ...++.+.+.++|.+++++|+.++++++++++|+|++++ .|+||++||..+..+.+...+|++||
T Consensus        86 g~iDilvnnag~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  163 (251)
T d2c07a1          86 KNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSK  163 (251)
T ss_dssp             SCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCceeeeeccccc-cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHHH
Confidence            9999999999986 567888999999999999999999999999999999887 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+.+|+|+|+.||+++|||||+|+||+++|++.....++..... ....|.+|+.+|+|||+++.||+++++.|+|||+
T Consensus       164 aal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~-~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  242 (251)
T d2c07a1         164 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNI-ISNIPAGRMGTPEEVANLACFLSSDKSGYINGRV  242 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHH-HTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcE
Confidence            999999999999999999999999999999999876654433322 3346889999999999999999999999999999


Q ss_pred             EeeCCCcc
Q 024839          242 LVVDGGFT  249 (262)
Q Consensus       242 i~~dgG~~  249 (262)
                      |.||||+|
T Consensus       243 i~vDGG~s  250 (251)
T d2c07a1         243 FVIDGGLS  250 (251)
T ss_dssp             EEESTTSC
T ss_pred             EEECCCcC
Confidence            99999975

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2e-58  Score=379.75  Aligned_cols=245  Identities=28%  Similarity=0.386  Sum_probs=219.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   ..++.++++|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988887776652   257889999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTI  159 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~  159 (262)
                      +|++|+||||||+. ...++.+++.++|++.+++|+.+++.++|.++|+|++++ .|+||+++|..+. .+.+...+|++
T Consensus        81 ~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 FGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             HSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchHH
Confidence            99999999999986 668999999999999999999999999999999999887 8999999997764 46677889999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +|+|+.+|+|+|+.|++++|||||+|+||+++|++........ .........|.+|+.+|+|||++++||++++++|+|
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~it  238 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCc
Confidence            9999999999999999999999999999999999976543222 112222346889999999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      ||+|.||||++.
T Consensus       239 G~~i~vDGG~ta  250 (251)
T d1vl8a_         239 GQIIFVDGGWTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEeCcCeeC
Confidence            999999999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.5e-58  Score=381.03  Aligned_cols=250  Identities=23%  Similarity=0.293  Sum_probs=226.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..  .++.++++|++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999888877743  57889999999999999999999999


Q ss_pred             hC-CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           81 YG-SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        81 ~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      ++ ++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|++++ .|+||+++|..+..+.+...+|++
T Consensus        83 ~~~~idilvnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  160 (259)
T d2ae2a_          83 FHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGA  160 (259)
T ss_dssp             TTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCceEEEECCcee-ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchHH
Confidence            87 799999999986 567899999999999999999999999999999999987 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--hHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGF--VCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      +|+|+.+|+|+++.|++++|||||+|+||+++||+.......  ....  ......|.+|+.+|+|||++++||+++.+.
T Consensus       161 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  240 (259)
T d2ae2a_         161 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS  240 (259)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999999999999999999999999999999999986443222  1111  122346889999999999999999999999


Q ss_pred             ceeceEEeeCCCcccccCc
Q 024839          236 YVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~~~~~  254 (262)
                      |+|||+|.||||+++..++
T Consensus       241 ~itG~~i~VDGG~~a~~G~  259 (259)
T d2ae2a_         241 YVTGQIIYVDGGLMANCGF  259 (259)
T ss_dssp             TCCSCEEEESTTGGGCSCC
T ss_pred             CCcCcEEEECCCeEeeCCC
Confidence            9999999999999987764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=5.6e-58  Score=379.50  Aligned_cols=244  Identities=29%  Similarity=0.426  Sum_probs=212.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.   ..++.++++|++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999974 45555555442   2578899999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|+||||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+..+.+...+|++||
T Consensus        82 G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccc-cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhhh
Confidence            9999999999987 568899999999999999999999999999999999987 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-----------HhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-----------EGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +|+.+|+|+++.|++++|||||+|+||+++||+........           .........|.+|+.+|+|||++++|||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~  239 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999876542211           1111223458899999999999999999


Q ss_pred             CCCCCceeceEEeeCCCcccc
Q 024839          231 SDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       231 ~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ++.+.|+|||+|.+|||++.+
T Consensus       240 S~~a~~itG~~i~vDGG~tar  260 (260)
T d1x1ta1         240 SDAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             ChhhCCCcCCEEEECcchhcC
Confidence            999999999999999999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-57  Score=371.97  Aligned_cols=240  Identities=36%  Similarity=0.486  Sum_probs=217.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.++++   .++++||++|+++++++++++.+++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG---AHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT---CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            35889999999999999999999999999999999999999888877664   678999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++ .+.++++|| .+..+.+...+|+++|+|
T Consensus        78 iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss-~~~~~~~~~~~Y~asKaa  154 (242)
T d1ulsa_          78 LDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTAS-RVYLGNLGQANYAASMAG  154 (242)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECC-GGGGCCTTCHHHHHHHHH
T ss_pred             ceEEEECCccc-ccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecc-ccccCCCCCcchHHHHHH
Confidence            99999999987 568899999999999999999999999999999998876 677777776 457778889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      +.+|+|+|+.||+++|||||+|+||+++|++.....+.... ......|.+|+.+|+||++++.||++++++|+|||+|.
T Consensus       155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~  233 (242)
T d1ulsa_         155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVRE-KAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHH-HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHH-HHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEE
Confidence            99999999999999999999999999999998766444333 33334688999999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      +|||+++
T Consensus       234 vDGG~t~  240 (242)
T d1ulsa_         234 VDGGRTI  240 (242)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccC
Confidence            9999987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.6e-58  Score=378.34  Aligned_cols=243  Identities=35%  Similarity=0.470  Sum_probs=221.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.++++ .++.++++|++++++++++++++.++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999999999999998888886 578999999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+..++|++||+|+
T Consensus        81 DilVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal  158 (254)
T d1hdca_          81 DGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGV  158 (254)
T ss_dssp             CEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEecCccc-cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHHHHH
Confidence            9999999986 568899999999999999999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCC-CHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVL-KAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                      .+|+|+|+.|++++|||||+|+||+++||+......+.... .....|.+|+. .|+|||++++||+++.+.|+|||+|.
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~  237 (254)
T d1hdca_         159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG-NYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELA  237 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT-SCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH-HHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEE
Confidence            99999999999999999999999999999865432222111 11234778886 69999999999999999999999999


Q ss_pred             eCCCcccc
Q 024839          244 VDGGFTAV  251 (262)
Q Consensus       244 ~dgG~~~~  251 (262)
                      +|||++.-
T Consensus       238 vDGG~t~g  245 (254)
T d1hdca_         238 VDGGWTTG  245 (254)
T ss_dssp             ESTTTTTS
T ss_pred             eCCCccCC
Confidence            99999873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=4.2e-57  Score=375.80  Aligned_cols=249  Identities=48%  Similarity=0.749  Sum_probs=222.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|+||+||||||++|||+++|++|+++|++|++++|+++.++++.+++.. ..+.+++||++++++++++++++.+++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999988865 56788999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCC-CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC-ccchhhh
Q 024839           84 LDIMYSNAGVAGPV-GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP-HAYTISK  161 (262)
Q Consensus        84 ~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK  161 (262)
                      +|++|||||+.... ..+.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+..+.+.. ..|++||
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhH
Confidence            99999999986433 3577899999999999999999999999999999887 8999999999998876554 4899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----EGFVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      +|+.+|+|+++.||+++|||||+|+||+++||+........    .........|.+|+.+|||||++++||+++++.|+
T Consensus       162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  241 (268)
T d2bgka1         162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV  241 (268)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCc
Confidence            99999999999999999999999999999999987653221    22222333477899999999999999999999999


Q ss_pred             eceEEeeCCCcccccCc
Q 024839          238 SGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       238 ~G~~i~~dgG~~~~~~~  254 (262)
                      |||+|.||||++.+.+.
T Consensus       242 tGq~i~VDGG~t~~~p~  258 (268)
T d2bgka1         242 SGLNLVIDGGYTRTNPA  258 (268)
T ss_dssp             CSCEEEESTTGGGCCTH
T ss_pred             cCceEEECcCcccCCCC
Confidence            99999999999886643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.9e-58  Score=373.01  Aligned_cols=237  Identities=27%  Similarity=0.377  Sum_probs=208.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      |+++++||++|||||++|||+++|++|+++|++|++++|+.+..         .++..+++|++|+++++++++++.+++
T Consensus         1 ~~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           1 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh---------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            56789999999999999999999999999999999999997654         346789999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++.++|.++|+|++++ .|+||++||..+..+.+...+|++||
T Consensus        72 g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  149 (237)
T d1uzma1          72 GPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASK  149 (237)
T ss_dssp             SSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHH
T ss_pred             CCceEEEeeeccc-ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHH
Confidence            9999999999986 567899999999999999999999999999999999988 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceE
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHD  241 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~  241 (262)
                      +|+.+|+|+|+.|++++|||||+|+||+++|++.+...+... .......|.+|+.+|||+|+++.||+++++.|+|||+
T Consensus       150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  228 (237)
T d1uzma1         150 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV  228 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999998765543332 2333446889999999999999999999999999999


Q ss_pred             EeeCCCccc
Q 024839          242 LVVDGGFTA  250 (262)
Q Consensus       242 i~~dgG~~~  250 (262)
                      |.+|||++|
T Consensus       229 i~vdGG~~m  237 (237)
T d1uzma1         229 IPVDGGMGM  237 (237)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCCCCC
Confidence            999999765

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-57  Score=373.48  Aligned_cols=241  Identities=33%  Similarity=0.455  Sum_probs=214.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++||+||||||++|||+++|++|+++|++|++++|+++.. +..++++   ..++++|++++++++++++++.+++|++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIG---GAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHT---CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC---CeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            37899999999999999999999999999999999997754 4445544   4678999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+..+.+...+|+++|+|+
T Consensus        78 DiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal  155 (248)
T d2d1ya1          78 DVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGL  155 (248)
T ss_dssp             CEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred             CeEEEeCcCC-CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHHHHH
Confidence            9999999987 558899999999999999999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----cchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----NDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      .+|+|+++.|++++|||||+|+||+++||+.....     ++..........|.+|+.+|+||++++.||+++.++|+||
T Consensus       156 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG  235 (248)
T d2d1ya1         156 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG  235 (248)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence            99999999999999999999999999999754321     1111112223458899999999999999999999999999


Q ss_pred             eEEeeCCCcccc
Q 024839          240 HDLVVDGGFTAV  251 (262)
Q Consensus       240 ~~i~~dgG~~~~  251 (262)
                      |+|.+|||++.+
T Consensus       236 ~~i~vDGG~tas  247 (248)
T d2d1ya1         236 AILPVDGGMTAS  247 (248)
T ss_dssp             CEEEESTTGGGB
T ss_pred             cEEEcCcCcccc
Confidence            999999999763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-57  Score=374.29  Aligned_cols=241  Identities=28%  Similarity=0.451  Sum_probs=217.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.  ++.+++||++|+++++++++++.++++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999999999999988888775  47889999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||......++++.+.++|++++++|+.+++.++|+++|+|+++  +|+||++||..+..+.+...+|+++|+|+
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~~~~~Y~asKaal  158 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAV  158 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccccccCcchhHHHHhhH
Confidence            9999999986566778899999999999999999999999999999865  59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC---ccchHhH--HHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT---INDVEGF--VCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      .+|+|+||.|++++|||||+|+||+++||+....   ..+....  ......|.+|+.+|+|+|++++||+++ +.|+||
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~itG  237 (250)
T d1ydea1         159 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTG  237 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCS
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCcC
Confidence            9999999999999999999999999999985432   1111111  122345889999999999999999996 789999


Q ss_pred             eEEeeCCCccc
Q 024839          240 HDLVVDGGFTA  250 (262)
Q Consensus       240 ~~i~~dgG~~~  250 (262)
                      |+|.+|||+++
T Consensus       238 ~~i~vDGG~~l  248 (250)
T d1ydea1         238 IELLVTGGAEL  248 (250)
T ss_dssp             CEEEESTTTTS
T ss_pred             CeEEECCCccc
Confidence            99999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.2e-57  Score=374.21  Aligned_cols=244  Identities=21%  Similarity=0.199  Sum_probs=220.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      |+|||||++|||+++|++|+++|++|++++|+.+..+++.+...    .+.++|++++++++++++++.+++|++|+|||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE----TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH----HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC----cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            89999999999999999999999999999999888776654322    24578999999999999999999999999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHH
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVR  169 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  169 (262)
                      |||+.....++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.+...+|++||+|+.+|+|
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~  156 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLAN  156 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHHHH
Confidence            999875667899999999999999999999999999999999887 8999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-------hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          170 SAASELGKHGIRVNCVSPFGVATPFSAGTIND-------VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       170 ~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +|+.||+++|||||+|+||+++|++.......       ..........|.+|+.+|+|||++++||+|++++|+|||+|
T Consensus       157 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i  236 (252)
T d1zmta1         157 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVF  236 (252)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEE
T ss_pred             HHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999999999999987665321       11122233458899999999999999999999999999999


Q ss_pred             eeCCCcccccCccccc
Q 024839          243 VVDGGFTAVTNVMSML  258 (262)
Q Consensus       243 ~~dgG~~~~~~~~~~~  258 (262)
                      .||||++|...+|+||
T Consensus       237 ~vdGG~~~~~~~p~~p  252 (252)
T d1zmta1         237 WLAGGFPMIERWPGMP  252 (252)
T ss_dssp             EESTTCCCCCCCTTCC
T ss_pred             EECCCceeCCCCCcCC
Confidence            9999999999999998

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=6.5e-57  Score=372.87  Aligned_cols=242  Identities=28%  Similarity=0.419  Sum_probs=219.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..  .++.+++||++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58899999999999999999999999999999999999998888877743  5789999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ++|++|||||......++.+++.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.+...+|+++|+
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHHH
Confidence            9999999999876667899999999999999999999999999999999887 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC-------------c--cchHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT-------------I--NDVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      |+.+|+|+|+.|++++|||||+|+||+++|++....             .  ++..........|.+|+.+|+|||++++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  240 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999974321             1  1111111223458899999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCC
Q 024839          228 FLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG  247 (262)
                      ||+++.+.|+|||+|.||||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.4e-56  Score=369.87  Aligned_cols=241  Identities=32%  Similarity=0.419  Sum_probs=217.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |+||||||++|||+++|++|+++|++|++++|++++++++.+++..  .++.+++||++++++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            6789999999999999999999999999999999999888877743  57889999999999999999999999999999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHHH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLLG  166 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (262)
                      ||||||+. ...++.+++.++|++++++|+.++++++|+++|+|.+++..++|+++||..+..+.+..++|+++|+|+.+
T Consensus        82 lVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          82 IVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEeccccc-ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            99999986 66899999999999999999999999999999998876647899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch----------HhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          167 LVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV----------EGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       167 ~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      |+|+|+.|++++|||||+|+||+++||+........          .........|.+|+.+|+|||++++||+++.++|
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999999999999999999999999999864432111          1111223458899999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +|||+|.+|||+.+
T Consensus       241 itG~~i~vDGG~~~  254 (255)
T d1gega_         241 MTGQSLLIDGGMVF  254 (255)
T ss_dssp             CCSCEEEESSSSSC
T ss_pred             ccCcEEEecCCEEe
Confidence            99999999999876

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1e-56  Score=371.34  Aligned_cols=241  Identities=29%  Similarity=0.409  Sum_probs=216.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..  .++.++++|++++++++++++++.++++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            389999999999999999999999999999999999998888877743  578999999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHH--HHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARV--MVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      |+||||||+. ...++.+++.++|++++++|+.++++++|+++|+  |++++ .|+||+++|..+..+.+...+|++||+
T Consensus        81 DilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asKa  158 (257)
T d2rhca1          81 DVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKH  158 (257)
T ss_dssp             SEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEeccccc-CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHHH
Confidence            9999999987 5688999999999999999999999999999997  55555 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----------DVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      |+.+|+|+||.|++++|||||+|+||+++|||.....+          +..........|.+|+.+|+|||++++||+|+
T Consensus       159 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~  238 (257)
T d2rhca1         159 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP  238 (257)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998644311          11111222345889999999999999999999


Q ss_pred             CCCceeceEEeeCCCcc
Q 024839          233 ESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~  249 (262)
                      .++|+|||+|.||||++
T Consensus       239 ~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         239 GAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GGTTCCSCEEEESTTCC
T ss_pred             hhcCCcCceEEECcCcc
Confidence            99999999999999974

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.5e-57  Score=368.90  Aligned_cols=239  Identities=28%  Similarity=0.438  Sum_probs=215.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEee-CCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIAD-IQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.+++..  .++.++++|++++++++++++++.++++++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 566666666665532  5788999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||.. ...++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+...+|++||+|+.
T Consensus        82 iLVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccc-cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            999999987 568999999999999999999999999999999999887 899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHc-CCCCCceeceEEee
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLA-SDESAYVSGHDLVV  244 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~i~G~~i~~  244 (262)
                      +|+|+|+.||+++|||||+|+||+++||+.....++.... .....|.+|+.+|+|||+++.||+ ++.+.|+|||+|.+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~v  238 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK-ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHH-HHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence            9999999999999999999999999999987665443332 233468899999999999999997 89999999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+++
T Consensus       239 dGG~si  244 (244)
T d1edoa_         239 DGGIAI  244 (244)
T ss_dssp             STTTTC
T ss_pred             CCCeeC
Confidence            999975

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-56  Score=364.54  Aligned_cols=242  Identities=29%  Similarity=0.377  Sum_probs=216.6

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      |++.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.  .+..+++|++|+++++++++    ++
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHHH----Hh
Confidence            4567899999999999999999999999999999999999999998888876  47789999999999877664    56


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++..|+||+++|..+..+.+...+|++||
T Consensus        75 g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  153 (244)
T d1pr9a_          75 GPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             CCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCceEEEeccccc-cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence            8999999999986 568999999999999999999999999999999876544379999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          162 HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      +|+.+|+|+++.||+++|||||+|+||+++||+......+... .......|.+|+.+|+|||+++.||+++.++|+|||
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~  233 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS  233 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCc
Confidence            9999999999999999999999999999999987665433222 222334588999999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 024839          241 DLVVDGGFTA  250 (262)
Q Consensus       241 ~i~~dgG~~~  250 (262)
                      +|.+|||++.
T Consensus       234 ~i~vDGG~~A  243 (244)
T d1pr9a_         234 TLPVEGGFWA  243 (244)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECccHhh
Confidence            9999999974

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.1e-56  Score=365.80  Aligned_cols=241  Identities=27%  Similarity=0.337  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.  .+..+++|++|+++++++++    ++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~----~~g~   74 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALG----GIGP   74 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHHH----HcCC
Confidence            46899999999999999999999999999999999999999988888775  47789999999999877665    5699


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      +|+||||||+. ...++.+++.++|++.+++|+.+++.++|.+.|.|.+++..|+||+++|..+..+.+...+|+++|+|
T Consensus        75 iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  153 (242)
T d1cyda_          75 VDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA  153 (242)
T ss_dssp             CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CeEEEECCccc-cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHH
Confidence            99999999986 56899999999999999999999999999999987765547999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +.+|+|+|+.|++++|||||+|+||+++||+....... ..........|.+|+.+||||++++.||+++.+.|+|||+|
T Consensus       154 l~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i  233 (242)
T d1cyda_         154 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI  233 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceE
Confidence            99999999999999999999999999999986544322 22222333468899999999999999999999999999999


Q ss_pred             eeCCCcccc
Q 024839          243 VVDGGFTAV  251 (262)
Q Consensus       243 ~~dgG~~~~  251 (262)
                      .+|||++.+
T Consensus       234 ~vDGG~~as  242 (242)
T d1cyda_         234 LVDAGYLAS  242 (242)
T ss_dssp             EESTTGGGC
T ss_pred             EeCcchhcc
Confidence            999999763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.8e-55  Score=363.44  Aligned_cols=248  Identities=24%  Similarity=0.320  Sum_probs=218.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +++++||+||||||++|||+++|++|+++|++|++++|++++++++.+++..  ..+++++||++++++++++++++.++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999999988888777743  57888999999999999999999999


Q ss_pred             h-CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           81 Y-GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        81 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      + +++|+||||||.. ...++.+++.++|.+++++|+.+++.++++++|.|.+++ .|+||++||..+..+.+...+|++
T Consensus        81 ~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~~  158 (258)
T d1ae1a_          81 FDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSA  158 (258)
T ss_dssp             TTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCcEEEecccccc-ccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHHH
Confidence            9 5799999999987 557999999999999999999999999999999999887 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---hHh--HHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---VEG--FVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +|+|+++|+|.++.|++++|||||+|+||+++||+.......   ...  .......|.+|+.+|+|||+++.||+++++
T Consensus       159 sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s  238 (258)
T d1ae1a_         159 SKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999999999987665322   111  122234588999999999999999999999


Q ss_pred             CceeceEEeeCCCccccc
Q 024839          235 AYVSGHDLVVDGGFTAVT  252 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~  252 (262)
                      +|+|||+|.||||+++..
T Consensus       239 ~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         239 SYITGQIIWADGGFTANG  256 (258)
T ss_dssp             TTCCSCEEEESTTGGGCS
T ss_pred             CCCcCcEEEeCCCeeccC
Confidence            999999999999999854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-55  Score=370.19  Aligned_cols=254  Identities=23%  Similarity=0.329  Sum_probs=225.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-------CCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-------PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.       ..++.+++||++++++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999988877766652       257899999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .++++++|+||||||.. ...++.+.+.++|++++++|+.++++++++++|.|++++ .++||++|| .+..+.+...+|
T Consensus        89 ~~~~G~iDiLVnnAg~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHhCCeEEEEeecccc-ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc-cccccccccccc
Confidence            99999999999999986 568899999999999999999999999999999999887 789998866 455667888999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH---HHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF---VCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +++|+|+.+|+|++|.|++++|||||+|+||+++|++...........   ......|.+|+.+|+|||++++||+|+.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999876553322111   12223588999999999999999999999


Q ss_pred             CceeceEEeeCCCcccccCccccccCC
Q 024839          235 AYVSGHDLVVDGGFTAVTNVMSMLEGH  261 (262)
Q Consensus       235 ~~i~G~~i~~dgG~~~~~~~~~~~~~~  261 (262)
                      .|+|||+|.||||+++.+..+.+|.+.
T Consensus       246 ~~iTG~~i~VDGG~sl~~~~~~~~~~~  272 (297)
T d1yxma1         246 SFITGQSVDVDGGRSLYTHSYEVPDHD  272 (297)
T ss_dssp             TTCCSCEEEESTTGGGCBTTCCCCCCS
T ss_pred             cCcCCcEEEeCcChhhhcCCCCCCCcc
Confidence            999999999999999988888877653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-55  Score=367.36  Aligned_cols=249  Identities=33%  Similarity=0.431  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++..     .++.+++||++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999998888877632     468999999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCC---CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC-CCccCCCCCC
Q 024839           79 EKYGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS-TASTVGGSGP  154 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS-~~~~~~~~~~  154 (262)
                      ++++++|++|||||.....   ....+.+.++|.+++++|+.+++.++++++|+|++++  |.+|+++| .++..+.+..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~~~~~~  158 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDF  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSS
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--CccccccchhccccCCCCc
Confidence            9999999999999986321   2334677889999999999999999999999998764  55555555 5678888999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH------hHH--HhhhcccCCCCCHHHHHHHH
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE------GFV--CKVANLKGIVLKAKHVAEAA  226 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~va~~~  226 (262)
                      .+|+++|+|+.+|+|+||.||+++|||||+|+||+++|++.........      ...  .....|.+|+.+|+|||+++
T Consensus       159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v  238 (272)
T d1xkqa_         159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999998654422111      111  12235889999999999999


Q ss_pred             HHHcCCC-CCceeceEEeeCCCcccccCc
Q 024839          227 LFLASDE-SAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       227 ~~l~~~~-~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      +||++++ +.|+|||+|.||||++|..++
T Consensus       239 ~fL~S~~as~~iTG~~i~vDGG~~l~~g~  267 (272)
T d1xkqa_         239 LFLADRNLSFYILGQSIVADGGTSLVMGT  267 (272)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCBGG
T ss_pred             HHHhCcchhCCccCeEEEeCcCHHHhcCC
Confidence            9999976 579999999999999997654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.4e-56  Score=365.64  Aligned_cols=242  Identities=31%  Similarity=0.443  Sum_probs=217.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++ .+..++++|++++++++++++++.++++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999999999999999999999988887 578899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+++  .|+||++||..+..+.+...+|++||+|+
T Consensus        82 DilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (253)
T d1hxha_          82 NVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             CEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CeEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCccccccccchhHHH
Confidence            9999999987 55789999999999999999999999999999999654  59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCC--CCcEEEEEeCCCccCCCCCCCccc--hHhHH--HhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          165 LGLVRSAASELGK--HGIRVNCVSPFGVATPFSAGTIND--VEGFV--CKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       165 ~~~~~~la~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      .+|+|+++.|+++  +|||||+|+||+++||+.....++  .....  .....|.+|+.+|+|+|++++||++++++|+|
T Consensus       159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~it  238 (253)
T d1hxha_         159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS  238 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCc
Confidence            9999999999987  469999999999999986432211  11111  11234678899999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      ||+|.||||++.
T Consensus       239 G~~i~VDGG~~~  250 (253)
T d1hxha_         239 GSELHADNSILG  250 (253)
T ss_dssp             SCEEEESSSCTT
T ss_pred             CcEEEECccHhh
Confidence            999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=8.2e-56  Score=366.43  Aligned_cols=246  Identities=25%  Similarity=0.321  Sum_probs=218.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.   ..++.+++||++++++++++++++.+
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988877766652   25789999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-------CC
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-------GS  152 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-------~~  152 (262)
                      +++++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.+.|+|.+++..+.|++++|......       .+
T Consensus        84 ~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~  162 (260)
T d1h5qa_          84 DLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  162 (260)
T ss_dssp             HSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             HhCCCcEeccccccc-ccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence            999999999999986 6688999999999999999999999999999999976654788888888765433       24


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ...+|+++|+|+.+|+|+++.||+++|||||+|+||+++|++.....++.... .....|.+|+.+|+|||++++||+++
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~~~~pl~R~g~pedvA~~v~fL~S~  241 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDH-QASNIPLNRFAQPEEMTGQAILLLSD  241 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH-HHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999999999999987665443332 23346889999999999999999999


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.|+|||+|.||||+++
T Consensus       242 ~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         242 HATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             hhCCCcCceEEECCCeec
Confidence            999999999999999976

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.3e-55  Score=366.23  Aligned_cols=249  Identities=28%  Similarity=0.380  Sum_probs=218.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++..     .++.++++|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888777632     4688999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           80 KYGSLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++|++|++|||||.... .....+.+.++|++++++|+.+++.++|+++|+|++++ .+.|+++||.++..+.+...+|+
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceeh
Confidence            99999999999997532 23445678999999999999999999999999999887 78999999989888889999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch------HhHHH--hhhcccCCCCCHHHHHHHHHHHc
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV------EGFVC--KVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++||+........      .....  ....|.+|+.+|+|||++++||+
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~  239 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999865432111      11111  12358899999999999999999


Q ss_pred             CC-CCCceeceEEeeCCCcccccCc
Q 024839          231 SD-ESAYVSGHDLVVDGGFTAVTNV  254 (262)
Q Consensus       231 ~~-~~~~i~G~~i~~dgG~~~~~~~  254 (262)
                      |+ .+.|+|||+|.+|||+++..+.
T Consensus       240 S~d~s~~itG~~i~vDGG~~l~~g~  264 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTLVMGM  264 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGCCGG
T ss_pred             CCccccCccCcEEEeCcCHHHhcCC
Confidence            95 5889999999999999998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.3e-55  Score=363.59  Aligned_cols=244  Identities=33%  Similarity=0.411  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-----PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.     ..++.++++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999888877762     24689999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCC-ccCCCCCCc
Q 024839           80 KYGSLDIMYSNAGVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTA-STVGGSGPH  155 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~  155 (262)
                      +++++|++|||||...   ....+.+.+.++|++++++|+.+++.++++++|+|++++  |.+|+++|.. +..+.+...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCch
Confidence            9999999999999752   223556779999999999999999999999999998764  6666666655 577888899


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch------H--hHHHhhhcccCCCCCHHHHHHHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV------E--GFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+++|++........      .  ........|.+|+.+|+|||+++.
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999876542111      1  111223458899999999999999


Q ss_pred             HHcCCC-CCceeceEEeeCCCccc
Q 024839          228 FLASDE-SAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       228 ~l~~~~-~~~i~G~~i~~dgG~~~  250 (262)
                      ||+|++ ++|+|||+|.+|||+++
T Consensus       240 fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         240 FLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCCcccCCccCceEEeCCChhh
Confidence            999965 88999999999999987

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3e-54  Score=359.78  Aligned_cols=248  Identities=27%  Similarity=0.348  Sum_probs=216.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      |+|+||+||||||++|||+++|++|+++|++|++++|++++++++.++++ .++..+++|++++++++++++++.+++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG-DNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999999999999999999999988888776 57899999999999999999999999999


Q ss_pred             cCEEEeCCcCCCCCCC----cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           84 LDIMYSNAGVAGPVGT----ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      +|++|||||+......    ..+.+.++|++++++|+.+++.++|+++|+|+++  +|+||+++|..+..+.+..++|++
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~~~~~~~~~Y~a  157 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPNGGGPLYTA  157 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSTTSSCHHHHH
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhccCCCCCchHHH
Confidence            9999999998643332    2345567899999999999999999999999876  489999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc---------hHhHHHhhhcccCCCCCHHHHHHHHHHHc
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND---------VEGFVCKVANLKGIVLKAKHVAEAALFLA  230 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (262)
                      +|+|+.+|+|+||.|++++ ||||+|+||+++|++.......         ..........|.+|+.+|+|++++++||+
T Consensus       158 sKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~  236 (276)
T d1bdba_         158 AKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA  236 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999975 9999999999999986543211         11122233458899999999999999999


Q ss_pred             CC-CCCceeceEEeeCCCcccccCcc
Q 024839          231 SD-ESAYVSGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       231 ~~-~~~~i~G~~i~~dgG~~~~~~~~  255 (262)
                      ++ .+.|+|||.|.||||++++....
T Consensus       237 S~~~a~~itG~~i~VDGG~~~~g~~~  262 (276)
T d1bdba_         237 TRGDAAPATGALLNYDGGLGVRGFFS  262 (276)
T ss_dssp             CHHHHTTCSSCEEEESSSGGGCCSSC
T ss_pred             CCcccCCeeCcEEEECcChhhcceeC
Confidence            85 68899999999999999865443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3.6e-54  Score=352.43  Aligned_cols=239  Identities=36%  Similarity=0.509  Sum_probs=210.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..++++ .++.++++|++++++++++++++.++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            5789999999999999999999999999999999999999988888886 578899999999999999999999999999


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |++|||||.. ...++.+.+.++|.+++++|+.+++.++|.++|+|++   .+.++++||. +..+.+.+..|+++|+|+
T Consensus        81 DiLinnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~-a~~~~~~~~~Y~~sK~al  155 (241)
T d2a4ka1          81 HGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSV-AGLGAFGLAHYAAGKLGV  155 (241)
T ss_dssp             CEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCC-TTCCHHHHHHHHHCSSHH
T ss_pred             cEeccccccc-cccchhhhhcccccccccccccccccccccccccccc---ccceeecccc-ccccccCccccchhhHHH
Confidence            9999999986 5689999999999999999999999999999998754   3456555554 445557788999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEee
Q 024839          165 LGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       165 ~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~  244 (262)
                      ++|+|+||.|++++|||||+|+||+++|++.....++.... .....|.+|+.+|+|||++++||+++.+.|+||++|.+
T Consensus       156 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~-~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~v  234 (241)
T d2a4ka1         156 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQ-EVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV  234 (241)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHH-HHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHH-HHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEe
Confidence            99999999999999999999999999999987655443333 33346889999999999999999999999999999999


Q ss_pred             CCCccc
Q 024839          245 DGGFTA  250 (262)
Q Consensus       245 dgG~~~  250 (262)
                      |||+++
T Consensus       235 DGG~s~  240 (241)
T d2a4ka1         235 DGGRSI  240 (241)
T ss_dssp             STTTTT
T ss_pred             CCCccc
Confidence            999987

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.8e-54  Score=349.51  Aligned_cols=230  Identities=25%  Similarity=0.372  Sum_probs=206.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.       ...++.||+++.      ++.+.++++++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~~------~~~~~~~~g~iD   68 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRKD------LDLLFEKVKEVD   68 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTTC------HHHHHHHSCCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHHH------HHHHHHHhCCCc
Confidence            6899999999999999999999999999999999998766542       345788999863      455667889999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      ++|||||.. ...++.+++.++|++.+++|+.+++.++++++|+|++++ .|+||+++|..+..+.+....|+++|+|+.
T Consensus        69 ~lVnnAG~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asKaal~  146 (234)
T d1o5ia_          69 ILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALT  146 (234)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEeccccc-CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHHHHHH
Confidence            999999976 567899999999999999999999999999999999877 899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeC
Q 024839          166 GLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVD  245 (262)
Q Consensus       166 ~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d  245 (262)
                      +|+|++|.|++++|||||+|+||+++|++......+..........|.+|+.+|+|||+++.||++++++|+|||+|.+|
T Consensus       147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vD  226 (234)
T d1o5ia_         147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVD  226 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEEC
Confidence            99999999999999999999999999998765544444444444568899999999999999999999999999999999


Q ss_pred             CCccc
Q 024839          246 GGFTA  250 (262)
Q Consensus       246 gG~~~  250 (262)
                      ||++.
T Consensus       227 GG~s~  231 (234)
T d1o5ia_         227 GGLSK  231 (234)
T ss_dssp             TTCCC
T ss_pred             ccccc
Confidence            99965

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-54  Score=357.11  Aligned_cols=248  Identities=23%  Similarity=0.230  Sum_probs=209.3

Q ss_pred             CCCCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ||..+|+||++|||||+|  |||+++|++|+++|++|++++|+++..++..+... ..+..++++|++++++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            788899999999999987  99999999999999999999998765444333322 246778999999999999999999


Q ss_pred             HHHhCCcCEEEeCCcCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC
Q 024839           78 IEKYGSLDIMYSNAGVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  154 (262)
                      .++++++|++|||||...   ...++.+.+.++|...+++|+.+++.+++.+.|+|++   .|+||++||..+..+.+..
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTC
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCCCCCc
Confidence            999999999999999752   2335678899999999999999999999999998853   5899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-HhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-EGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      .+|+++|+|+.+|+|++|.||+++|||||+|+||+++|++........ .........|.+|+.+|+|||+++.||+++.
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  237 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876653322 2222333468899999999999999999999


Q ss_pred             CCceeceEEeeCCCcccc
Q 024839          234 SAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       234 ~~~i~G~~i~~dgG~~~~  251 (262)
                      ++|+|||+|.||||+++.
T Consensus       238 s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         238 ASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             GTTCCSCEEEESTTGGGB
T ss_pred             hCCccCCeEEECcCEeCc
Confidence            999999999999999873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-52  Score=342.61  Aligned_cols=237  Identities=34%  Similarity=0.494  Sum_probs=206.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+..   .+....+|+.+.+.++.    ..+.++++
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~---~~~~~~~d~~~~~~~~~----~~~~~~~i   75 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---GIQTRVLDVTKKKQIDQ----FANEVERL   75 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGST---TEEEEECCTTCHHHHHH----HHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcc---CCceeeeeccccccccc----cccccccc
Confidence            489999999999999999999999999999999999998887765543   47788899988665554    45566899


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhhhHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a  163 (262)
                      |+||||+|.. ..+++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .|+||+++|..+. .+.+...+|+++|+|
T Consensus        76 d~lVn~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa  153 (245)
T d2ag5a1          76 DVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (245)
T ss_dssp             SEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             eeEEeccccc-CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHHHHHH
Confidence            9999999987 557899999999999999999999999999999999887 8999999998775 567888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-----chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-----DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      +++|+|+||.||+++|||||+|+||+++||+......     ...........|.+|+.+|+|+++++.||+++++.|+|
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iT  233 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT  233 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence            9999999999999999999999999999998654311     11112222346889999999999999999999999999


Q ss_pred             ceEEeeCCCccc
Q 024839          239 GHDLVVDGGFTA  250 (262)
Q Consensus       239 G~~i~~dgG~~~  250 (262)
                      ||+|.||||++|
T Consensus       234 G~~i~VDGG~sl  245 (245)
T d2ag5a1         234 GNPVIIDGGWSL  245 (245)
T ss_dssp             SCEEEECTTGGG
T ss_pred             CceEEeCCCcCC
Confidence            999999999986

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.2e-51  Score=335.50  Aligned_cols=227  Identities=25%  Similarity=0.335  Sum_probs=207.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCe-------EEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAF-------VIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++||||||++|||+++|++|+++|++       |++++|+.+.++++.+++..  .++.+++||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       89999999999888887743  5788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                      ++|++|+||||||+. ...++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||..+..+.+..++|++
T Consensus        82 ~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccc-cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHHH
Confidence            999999999999986 668999999999999999999999999999999999887 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceec
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSG  239 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G  239 (262)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|||.....++.          ..+..+|||+|+.++||+++++.+++|
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~----------~~~~~~PedvA~~v~~l~s~~~~~~~~  229 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVVE  229 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT----------GGGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh----------HhcCCCHHHHHHHHHHHHcCCccCccC
Confidence            9999999999999999999999999999999999986654332          145679999999999999999998888


Q ss_pred             eE-EeeCCC
Q 024839          240 HD-LVVDGG  247 (262)
Q Consensus       240 ~~-i~~dgG  247 (262)
                      +. +..+||
T Consensus       230 ~~~i~p~~G  238 (240)
T d2bd0a1         230 EIILRPTSG  238 (240)
T ss_dssp             EEEEEETTC
T ss_pred             CEEEEecCC
Confidence            75 557776

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-52  Score=342.80  Aligned_cols=236  Identities=28%  Similarity=0.371  Sum_probs=206.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +||+||||||++|||+++|++|+++|++|++++|+.+++++..+++..    .++.+++||++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            699999999999999999999999999999999999998888777643    4788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccchhh
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                      ++|+||||||...         .++|++.+++|+.+++.+++.++|+|.+++  ..|+||++||..+..+.+..++|++|
T Consensus        82 ~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            9999999999752         245899999999999999999999998753  24899999999999999999999999


Q ss_pred             hHHHHHHHHH--HHHHHCCCCcEEEEEeCCCccCCCCCCCccchH-------hHHHhhhcccCCCCCHHHHHHHHHHHcC
Q 024839          161 KHGLLGLVRS--AASELGKHGIRVNCVSPFGVATPFSAGTINDVE-------GFVCKVANLKGIVLKAKHVAEAALFLAS  231 (262)
Q Consensus       161 K~a~~~~~~~--la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~va~~~~~l~~  231 (262)
                      |+|+.+|+|+  |+.|++++|||||+|+||+++|||.........       ........|.+|+.+|+|||++++||++
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  232 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc
Confidence            9999999997  788999999999999999999998755432211       1111223477899999999999999999


Q ss_pred             CCCCceeceEEeeCCCcccccC
Q 024839          232 DESAYVSGHDLVVDGGFTAVTN  253 (262)
Q Consensus       232 ~~~~~i~G~~i~~dgG~~~~~~  253 (262)
                      ++  ++|||.|.||||+.+..+
T Consensus       233 ~~--~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         233 DD--ALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             CT--TCSSCEEEEETTTEEEEC
T ss_pred             CC--CCCCCEEEECCCCeeecc
Confidence            75  599999999999987543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.2e-51  Score=341.30  Aligned_cols=241  Identities=25%  Similarity=0.343  Sum_probs=208.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC-chhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ-DELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+|.||+||||||++|||+++|++|+++|++|++++++ ++..+++.+++..  .++++++||++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999987554 4555666666532  57899999999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc-cCCCCCCccchh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS-TVGGSGPHAYTI  159 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~  159 (262)
                      ++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|++   .+.+++++|..+ ..+.+.+..|++
T Consensus        82 ~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             cCCCcEEEeccccc-cccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccccCCCCchhHHH
Confidence            99999999999986 6688999999999999999999999999999999954   467777766655 446788999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC------------ccchHhHHHhhhcccCCCCCHHHHHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT------------INDVEGFVCKVANLKGIVLKAKHVAEAAL  227 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (262)
                      +|+|+.+|+|+|+.||+++|||||+|+||+++||+.+..            ..+..........|.+|+.+|+||++++.
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999864221            11222233334568899999999999999


Q ss_pred             HHcCCCCCceeceEEeeCCCc
Q 024839          228 FLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       228 ~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ||+++.++|+||++|.+|||+
T Consensus       238 fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         238 ALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999997

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.2e-51  Score=344.15  Aligned_cols=248  Identities=23%  Similarity=0.303  Sum_probs=216.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .+.+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.   ..++.++++|++++++++++++.+.
T Consensus        19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence            3458999999999999999999999999999999999999988877776653   2578899999999999999999999


Q ss_pred             HHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           79 EKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++++++|++|||||.. ...++.+.+.++|.+.+.+|+.+.+.+.+...+.+......+.+++++|..+..+.+...+|+
T Consensus        99 ~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ys  177 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  177 (294)
T ss_dssp             HHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hhccccchhhhhhhhc-cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHH
Confidence            9999999999999986 567888999999999999999999999998888887766578899999999888889999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchH--hHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVE--GFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ++|+|+.+|+|.+|.|++++|||||+|+||+++|++.........  ........|.+|+.+|+|||+++.||+++++.|
T Consensus       178 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~  257 (294)
T d1w6ua_         178 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW  257 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999999998766543322  222223458899999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +|||+|.+|||+++
T Consensus       258 itG~~i~vDGG~~l  271 (294)
T d1w6ua_         258 INGAVIKFDGGEEV  271 (294)
T ss_dssp             CCSCEEEESTTHHH
T ss_pred             CCCcEEEECCChhh
Confidence            99999999999764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.1e-51  Score=341.11  Aligned_cols=242  Identities=26%  Similarity=0.386  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.  ..++.++++|++++++++++++++.+.+
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999998774 44555555542  2578999999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~s  160 (262)
                      +++|++|||+|.. ...++.+.+.++|.+++++|+.+++.+++++.|+|++   .+++++++|..+. .+.+....|+++
T Consensus        95 g~idilV~nag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~~~~~~~Y~as  170 (272)
T d1g0oa_          95 GKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGS  170 (272)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             CCCCccccccccc-hhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---ccccccccccccccccccchhhHHHH
Confidence            9999999999986 6678999999999999999999999999999999964   4688888887654 456677889999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc------------cchHhHHHhhhcccCCCCCHHHHHHHHHH
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI------------NDVEGFVCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                      |+|+++|+|++|.||+++|||||+|+||+++|++.....            ++..........|.+|+.+|+|||+++.|
T Consensus       171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f  250 (272)
T d1g0oa_         171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999998743221            11111223345688999999999999999


Q ss_pred             HcCCCCCceeceEEeeCCCccc
Q 024839          229 LASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      |+++.+.|+||++|.||||++|
T Consensus       251 L~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         251 LASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999865

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.3e-52  Score=349.14  Aligned_cols=239  Identities=26%  Similarity=0.355  Sum_probs=209.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC---------chhHHHHHhhhCCCceEEEEecCCCHHHHHH
Q 024839            2 SKPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ---------DELGNQVVSSIGPEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   72 (262)
                      |.++++||++|||||++|||+++|++|+++|++|++.+|+         .+.++++.+++. .+.....+|+.+.+++++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHH
Confidence            4567899999999999999999999999999999998765         334455555554 245567899999999999


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS  152 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~  152 (262)
                      +++++.+++|++|+||||||+. ..+++.+++.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.+
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCC
Confidence            9999999999999999999987 568999999999999999999999999999999999887 89999999999999999


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      ...+|++||+|+.+|+++|+.|++++|||||+|+||++.|++.....+           +..+..+|+|||++++|||++
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~-----------~~~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE-----------DLVEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH-----------HHHHHSCGGGTHHHHHHHTST
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH-----------hhHhcCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999998876443322           123346899999999999997


Q ss_pred             CCCceeceEEeeCCCcccccCcc
Q 024839          233 ESAYVSGHDLVVDGGFTAVTNVM  255 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~~~~~~  255 (262)
                      .+ ++||++|.+|||+.-+..+.
T Consensus       227 ~a-~itG~~i~vdGG~~~~~~~~  248 (302)
T d1gz6a_         227 SC-EENGGLFEVGAGWIGKLRWE  248 (302)
T ss_dssp             TC-CCCSCEEEEETTEEEEEEEE
T ss_pred             Cc-CCCCcEEEeCCCceeEEEEe
Confidence            65 79999999999987665443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-50  Score=332.65  Aligned_cols=242  Identities=22%  Similarity=0.259  Sum_probs=209.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .+++||+||||||++|||+++|++|+++|++|++++|++++++++.+++..    .++.+++||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            348899999999999999999999999999999999999998888777632    4788999999999999999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCC--CCCCcc
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVG--GSGPHA  156 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~--~~~~~~  156 (262)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|++++ ..|+||+++|..+...  .+....
T Consensus        86 ~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~  164 (257)
T d1xg5a_          86 QHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  164 (257)
T ss_dssp             HHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hcCCCCEEEeccccc-CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence            999999999999986 568999999999999999999999999999999998754 3689999999988654  445667


Q ss_pred             chhhhHHHHHHHHHHHHHH--CCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          157 YTISKHGLLGLVRSAASEL--GKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      |+++|+|+.+|+|+|+.|+  +++||+||+|+||+++|++......... .......|.+++.+|+|||++++||+++++
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~-~~~~~~~~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-EKAAATYEQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-HHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH-HHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence            9999999999999999998  7899999999999999998654433222 222334577999999999999999999999


Q ss_pred             CceeceEEeeCCC
Q 024839          235 AYVSGHDLVVDGG  247 (262)
Q Consensus       235 ~~i~G~~i~~dgG  247 (262)
                      .|+|||++..++|
T Consensus       244 ~~itG~i~i~~~g  256 (257)
T d1xg5a_         244 HIQIGDIQMRPTG  256 (257)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             cCeECCEEEEeCC
Confidence            9999997555444

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-47  Score=311.83  Aligned_cols=237  Identities=28%  Similarity=0.420  Sum_probs=203.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||+||||||++|||+++|++|+++|++|++++|+++.+++..+++. .+.....+|+.+.++++...+.+......+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CCcccccccccccccccccccccccccccc
Confidence            6899999999999999999999999999999999999999999988887 578889999999999999999999999999


Q ss_pred             CEEEeCCcCCC-----CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC-----CCCcEEEEecCCCccCCCCCC
Q 024839           85 DIMYSNAGVAG-----PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN-----KIRGSIICTTSTASTVGGSGP  154 (262)
Q Consensus        85 d~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~~~~ii~isS~~~~~~~~~~  154 (262)
                      |.+++|+++..     ...++.+.+.++|++++++|+.+++++++++.|+|..+     ...|+||++||..+..+.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  160 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  160 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc
Confidence            99999987652     22356678899999999999999999999999998754     126899999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ++|+++|+|+++|+|+|+.|++++|||||+|+||+++|++.....++..........+.+|+.+|+|||++++||++  +
T Consensus       161 ~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s--~  238 (248)
T d2o23a1         161 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--N  238 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--C
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--C
Confidence            99999999999999999999999999999999999999998766554444433332234889999999999999996  5


Q ss_pred             CceeceEEee
Q 024839          235 AYVSGHDLVV  244 (262)
Q Consensus       235 ~~i~G~~i~~  244 (262)
                      +|+|||+|+|
T Consensus       239 ~~itGq~I~v  248 (248)
T d2o23a1         239 PFLNGEVIRL  248 (248)
T ss_dssp             TTCCSCEEEE
T ss_pred             CCCCceEeEC
Confidence            7999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-47  Score=314.93  Aligned_cols=236  Identities=18%  Similarity=0.191  Sum_probs=203.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---cCCeEEEeeCCchhHHHHHhhhC----CCceEEEEecCCCHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAE---HGAFVIIADIQDELGNQVVSSIG----PEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~---~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.    ..++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999996   79999999999999988877763    357899999999999999999998


Q ss_pred             HHH----hCCcCEEEeCCcCCC--CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC-CCcEEEEecCCCccCC
Q 024839           78 IEK----YGSLDIMYSNAGVAG--PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK-IRGSIICTTSTASTVG  150 (262)
Q Consensus        78 ~~~----~~~~d~li~~ag~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~-~~~~ii~isS~~~~~~  150 (262)
                      .+.    .+.+|++|||||..+  ...++.+.+.++|++++++|+.++++++|.++|+|++++ ..|+||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            763    357899999999764  345688999999999999999999999999999998754 2579999999999999


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----cchHhHHHhhhcccCCCCCHHHHHHH
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----NDVEGFVCKVANLKGIVLKAKHVAEA  225 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~  225 (262)
                      .+.+.+|++||+|+++|+++|+.|  .+|||||+|+||++.|+|.....     ++..... ....+.+++.+|+|+|+.
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~p~evA~~  239 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL-QKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH-HHHHHTTCSBCHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHH-HhcCCCCCCCCHHHHHHH
Confidence            999999999999999999999999  67999999999999999864321     1111111 222467889999999999


Q ss_pred             HHHHcCCCCCceeceEEee
Q 024839          226 ALFLASDESAYVSGHDLVV  244 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~  244 (262)
                      +++|+++ ++|+|||+|++
T Consensus       240 i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         240 LLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEET
T ss_pred             HHHHhhh-ccCCCCCeEEe
Confidence            9999986 46999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=5.2e-47  Score=311.92  Aligned_cols=234  Identities=19%  Similarity=0.155  Sum_probs=196.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh---hhCCCceEEEEecCC-CHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS---SIGPEKASYRHCDVR-DEKQVEETVAYAIE   79 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~   79 (262)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.++.+++.+   .....++.++.+|++ +.++++++++.+.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999887766544432   234468899999998 67889999999999


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC--CCcEEEEecCCCccCCCCCCccc
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK--IRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      +++++|+||||||..         ++++|++++++|+.+++.+++.++|+|.+++  ..|+||+++|..+..+.+.+.+|
T Consensus        81 ~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            999999999999964         4567999999999999999999999997653  36899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      ++||+|+.+|+++|+.|++++|||||+|+||+++||+.+.....  ........ ...++..+||++|+.++++.+.   
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~va~~~~~~~~~---  227 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL-LLSHPTQTSEQCGQNFVKAIEA---  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH-HTTSCCEEHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc-cccCCCCCHHHHHHHHHHhhhC---
Confidence            99999999999999999999999999999999999986544221  11111111 1234567999999999888754   


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                      +.||+.|.+|||++-
T Consensus       228 ~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         228 NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             CCTTCEEEEETTEEE
T ss_pred             CCCCCEEEECCCEeC
Confidence            359999999999743

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-47  Score=308.11  Aligned_cols=218  Identities=22%  Similarity=0.303  Sum_probs=196.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++.||++|||||++|||+++|++|+++|++|++++|+.++++++.+++..  .++.++.||++|+++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999999999888877643  578999999999999999999999999


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISK  161 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  161 (262)
                      |++|++|||||.. ....+.+.+.++|++++++|+.|++++++.++|.|++++ .|+||++||..+..+.+.+++|++||
T Consensus        83 g~idilinnag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeecccc-ccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHHH
Confidence            9999999999987 557788899999999999999999999999999999988 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCC---CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          162 HGLLGLVRSAASELGK---HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       162 ~a~~~~~~~la~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      +|+.+|+++|+.|+++   +||+||+|+||+++|++.+....           +..+..+|+++++.+...+..+.
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~-----------~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST-----------SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH-----------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc-----------cccCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999976   58999999999999998764311           22556799999999998775543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-46  Score=310.83  Aligned_cols=243  Identities=21%  Similarity=0.243  Sum_probs=207.6

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+.+... ......+.+|+.+..++.+.++++.+.++
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            6899999999998  89999999999999999999998665544433332 24677889999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCC----CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccch
Q 024839           83 SLDIMYSNAGVAGPV----GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        83 ~~d~li~~ag~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      ++|++|||++.....    ........+.|...+++|+.+.+.+++.+.+.+.+   .+.|+++||..+..+.+....|+
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccCCCCcHHHH
Confidence            999999999875321    12234667789999999999999999999988743   46899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHh-HHHhhhcccCCCCCHHHHHHHHHHHcCCCCCce
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEG-FVCKVANLKGIVLKAKHVAEAALFLASDESAYV  237 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i  237 (262)
                      ++|+|+++|+|++|.||+++|||||+|+||+++|++.......... .......|.+|+.+||||++++.||+++++.|+
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~i  239 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            9999999999999999999999999999999999997765333222 223334688999999999999999999999999


Q ss_pred             eceEEeeCCCcccc
Q 024839          238 SGHDLVVDGGFTAV  251 (262)
Q Consensus       238 ~G~~i~~dgG~~~~  251 (262)
                      ||++|.+|||+++.
T Consensus       240 tG~~i~vDGG~~i~  253 (258)
T d1qsga_         240 SGEVVHVDGGFSIA  253 (258)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             cCceEEECcCHHHh
Confidence            99999999999885

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.3e-45  Score=308.80  Aligned_cols=239  Identities=25%  Similarity=0.237  Sum_probs=190.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc-hhHHHHHhhhC---CCceE-----------------EEEecCCCH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD-ELGNQVVSSIG---PEKAS-----------------YRHCDVRDE   67 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~-~~~~~~~~~~~---~~~~~-----------------~~~~D~~~~   67 (262)
                      .+||||||++|||+++|++|+++|++|++++++. +..+++.+++.   .....                 ...+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4799999999999999999999999999987664 44444444432   12333                 345679999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHH--------------HHHHHHHhhHHHHHHHHHHHHHHh-
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQF--------------DRTIATNLAGSVMAVKYAARVMVA-  132 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~~nv~~~~~l~~~~~~~~~~-  132 (262)
                      ++++++++++.+++|++|+||||||.. ...++.+.+.++|              ..++.+|+.+++++.+.+.+.+.. 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCcc-CCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999987 4456666655544              457899999999999999888643 


Q ss_pred             ----CCCCcEEEEecCCCccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh
Q 024839          133 ----NKIRGSIICTTSTASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK  208 (262)
Q Consensus       133 ----~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~  208 (262)
                          +...++||+++|.....+.+...+|+++|+|+.+|+|++|.||+++|||||+|+||++.+..  ...++.......
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--~~~~~~~~~~~~  239 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--DMPPAVWEGHRS  239 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--GSCHHHHHHHHT
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--cCCHHHHHHHHh
Confidence                22367999999999999999999999999999999999999999999999999999865432  223332222222


Q ss_pred             hhcc-cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          209 VANL-KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       209 ~~~~-~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                       ..| .+|+.+|+||+++++||+++++.|+|||+|.||||++++
T Consensus       240 -~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         240 -KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             -TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -cCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence             234 489999999999999999999999999999999999884

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.5e-45  Score=314.45  Aligned_cols=241  Identities=19%  Similarity=0.201  Sum_probs=196.1

Q ss_pred             CCCEEEEec--CCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--------------CceEEEE---------
Q 024839            7 QGKVAIIMG--AASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--------------EKASYRH---------   61 (262)
Q Consensus         7 ~~k~~lItG--~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~---------   61 (262)
                      ++|++||||  +++|||+++|++|+++|++|+++++..............              .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  568999999999999999999998876543322211100              1112233         


Q ss_pred             -----------ecCCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCCC-CCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHH
Q 024839           62 -----------CDVRDEKQVEETVAYAIEKYGSLDIMYSNAGVAGP-VGTILDLDMAQFDRTIATNLAGSVMAVKYAARV  129 (262)
Q Consensus        62 -----------~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~  129 (262)
                                 +|+.+.++++++++.+.+++|++|++|||+|.... .+++.+++.++|.+.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       36678888999999999999999999999997643 357889999999999999999999999999999


Q ss_pred             HHhCCCCcEEEEecCCCccCCCCC-CccchhhhHHHHHHHHHHHHHHCC-CCcEEEEEeCCCccCCCCCCC---------
Q 024839          130 MVANKIRGSIICTTSTASTVGGSG-PHAYTISKHGLLGLVRSAASELGK-HGIRVNCVSPFGVATPFSAGT---------  198 (262)
Q Consensus       130 ~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~pG~v~t~~~~~~---------  198 (262)
                      |++   .|+||++||..+..+.+. ...|+++|+|+++|+|+||.||++ +|||||+|+||+++|+..+..         
T Consensus       161 m~~---~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         161 MKP---QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccc---ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            943   589999999999888775 567999999999999999999986 699999999999999532220         


Q ss_pred             -----------------------------------ccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEe
Q 024839          199 -----------------------------------INDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLV  243 (262)
Q Consensus       199 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  243 (262)
                                                         ..+..........|.+|+.+|+|||.+++||+|+.++|+|||+|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                               011111122233588999999999999999999999999999999


Q ss_pred             eCCCccc
Q 024839          244 VDGGFTA  250 (262)
Q Consensus       244 ~dgG~~~  250 (262)
                      ||||+++
T Consensus       318 VDGG~~~  324 (329)
T d1uh5a_         318 VDNGLNI  324 (329)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccc
Confidence            9999976

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.7e-45  Score=296.71  Aligned_cols=230  Identities=30%  Similarity=0.380  Sum_probs=194.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|+||||||++|||+++|++|+++|++|++++|+++.          .+....++|+++......+.+....... .+.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~   69 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG----------EDLIYVEGDVTREEDVRRAVARAQEEAP-LFAV   69 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS----------SSSEEEECCTTCHHHHHHHHHHHHHHSC-EEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc----------ccceEeeccccchhhhHHHHHhhhcccc-ccch
Confidence            5999999999999999999999999999999998754          2466789999999999999888776654 4555


Q ss_pred             EeCCcCCC---CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHH------hCCCCcEEEEecCCCccCCCCCCccch
Q 024839           88 YSNAGVAG---PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMV------ANKIRGSIICTTSTASTVGGSGPHAYT  158 (262)
Q Consensus        88 i~~ag~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~------~~~~~~~ii~isS~~~~~~~~~~~~Y~  158 (262)
                      +++++...   ..........+.|.+++++|+.+++.+++.+.+.+.      +++ .|+||++||..+..+.+...+|+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~~~~~Y~  148 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAFEGQIGQAAYA  148 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhccCCCCchhhH
Confidence            55555432   223445677899999999999999999999999854      334 78999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCcee
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVS  238 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~  238 (262)
                      ++|+|+.+|+|+|+.||+++|||||+|+||+++|++.................+.+|+.+|||||+++.||++  ++|+|
T Consensus       149 asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~~iT  226 (241)
T d1uaya_         149 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NPMLN  226 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCC
Confidence            9999999999999999999999999999999999988776655444444443345889999999999999998  46999


Q ss_pred             ceEEeeCCCcccc
Q 024839          239 GHDLVVDGGFTAV  251 (262)
Q Consensus       239 G~~i~~dgG~~~~  251 (262)
                      ||+|.||||++|.
T Consensus       227 G~~i~VDGG~~m~  239 (241)
T d1uaya_         227 GEVVRLDGALRMA  239 (241)
T ss_dssp             SCEEEESTTCCCC
T ss_pred             CCEEEECCcccCC
Confidence            9999999999863

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.8e-45  Score=305.96  Aligned_cols=247  Identities=23%  Similarity=0.180  Sum_probs=196.7

Q ss_pred             CCCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh----------CC---Cc-eEEEEec--
Q 024839            2 SKPRLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI----------GP---EK-ASYRHCD--   63 (262)
Q Consensus         2 ~~~~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----------~~---~~-~~~~~~D--   63 (262)
                      |.++|+||++|||||++  |||+++|++|+++|++|++++|+...........          ..   .. -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            45689999999999876  9999999999999999999998754332221111          00   01 1233333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHhCCcCEEEeCCcCCC-CCCCcCCCCHHHHHHHHHHHhhHHHHHHH
Q 024839           64 ------------------VRDEKQVEETVAYAIEKYGSLDIMYSNAGVAG-PVGTILDLDMAQFDRTIATNLAGSVMAVK  124 (262)
Q Consensus        64 ------------------~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~l~~  124 (262)
                                        .++..+++++++++.++++++|+||||||... ...++.+.+.++|.+.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              34556778999999999999999999999753 34678899999999999999999999999


Q ss_pred             HHHHHHHhCCCCcEEEEecCCCcc-CCCCCCccchhhhHHHHHHHHHHHHHHC-CCCcEEEEEeCCCccCCCCCCCccc-
Q 024839          125 YAARVMVANKIRGSIICTTSTAST-VGGSGPHAYTISKHGLLGLVRSAASELG-KHGIRVNCVSPFGVATPFSAGTIND-  201 (262)
Q Consensus       125 ~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pG~v~t~~~~~~~~~-  201 (262)
                      ++++.+.+   .+.++.+++.... ...+....|+++|+++..+++.++.+++ ++|||||+|+||++.|++....... 
T Consensus       162 ~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~  238 (297)
T d1d7oa_         162 HFLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHHHhhc---CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence            99987754   3556666555544 3446677899999999999999999997 5799999999999999998765322 


Q ss_pred             hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          202 VEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      ..........|.+|+.+|+||+++++||+++.++|+|||+|.+|||++..
T Consensus       239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~  288 (297)
T d1d7oa_         239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhc
Confidence            22223334568899999999999999999999999999999999999863

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-45  Score=305.18  Aligned_cols=231  Identities=22%  Similarity=0.231  Sum_probs=187.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEe---eCCchh---HHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIA---DIQDEL---GNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~---~r~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      .|+||||||++|||+++|++|+++|++|+++   .|+.+.   +.+..+++..  .++.+++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4789999999999999999999999986655   444333   3344444432  5889999999999999999988753


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchh
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTI  159 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  159 (262)
                        +++|++|||+|.. ...++.+.+.++|++++++|+.|++.++++++|+|++++ .|+||++||.++..+.+...+|++
T Consensus        82 --g~idilvnnag~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccc-ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHH
Confidence              7899999999986 668889999999999999999999999999999999887 899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhH---------------H-HhhhcccCCCCCHHHHH
Q 024839          160 SKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGF---------------V-CKVANLKGIVLKAKHVA  223 (262)
Q Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~va  223 (262)
                      ||+|+.+|+++|+.|++++||+||+|+||+++|++...........               . .....+..+..+|||||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            9999999999999999999999999999999999976553221110               0 01112345678999999


Q ss_pred             HHHHHHcCCCC---CceeceEE
Q 024839          224 EAALFLASDES---AYVSGHDL  242 (262)
Q Consensus       224 ~~~~~l~~~~~---~~i~G~~i  242 (262)
                      +.+++++..+.   .|++|+.+
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHhCCCCCeEEecHHHH
Confidence            99999996553   57777754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.6e-44  Score=300.83  Aligned_cols=242  Identities=23%  Similarity=0.255  Sum_probs=189.8

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAAS--GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         5 ~~~~k~~lItG~s~--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+. .+++.  .....+.++|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKR-VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            37899999999765  99999999999999999999998643322 22221  145678899999999999999999999


Q ss_pred             hCCcCEEEeCCcCCCCC---CCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           81 YGSLDIMYSNAGVAGPV---GTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      ++++|++|||+|.....   ....+..++.+...+.++..+.....+.+.+   ..+..+.|+++++.....+.+....|
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKP---LLNNGASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG---GEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccc---ccccCcceeeecccccccccccchhh
Confidence            99999999999986322   2223344444555555555544444444333   22313457777777777777888899


Q ss_pred             hhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc-chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN-DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      +++|+|+.+|+|+++.|++++|||||+|+||+++|++.....+ +..........|.+|+.+|+||++++.||+|+.+.+
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence            9999999999999999999999999999999999998776643 333333445568899999999999999999999999


Q ss_pred             eeceEEeeCCCccc
Q 024839          237 VSGHDLVVDGGFTA  250 (262)
Q Consensus       237 i~G~~i~~dgG~~~  250 (262)
                      +|||+|.+|||+++
T Consensus       238 itG~~i~vDGG~~~  251 (274)
T d2pd4a1         238 VSGEVHFVDAGYHV  251 (274)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCceEEECCChhh
Confidence            99999999999975

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2e-43  Score=289.98  Aligned_cols=225  Identities=19%  Similarity=0.184  Sum_probs=185.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHH---HcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHH--Hh
Q 024839            8 GKVAIIMGAASGIGEATAKLFA---EHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIE--KY   81 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~---~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~--~~   81 (262)
                      .|+||||||++|||+++|++|+   ++|++|++++|++++++++.+... ..++.+++||++|+++++++++++.+  .+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            5899999999999999999996   579999999999988776654332 25899999999999999999999865  56


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----------CCcEEEEecCCCccCC-
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----------IRGSIICTTSTASTVG-  150 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----------~~~~ii~isS~~~~~~-  150 (262)
                      +++|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|+|+++.          ..|++|+++|..+... 
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            89999999999876666788999999999999999999999999999998641          2689999999887643 


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHH
Q 024839          151 --GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF  228 (262)
Q Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (262)
                        .+.+.+|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....+                .++++.++.++.
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~----------------~~~~~~~~~i~~  225 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP----------------LDVPTSTGQIVQ  225 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS----------------BCHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC----------------CCchHHHHHHHH
Confidence              45567999999999999999999999999999999999999999764322                123333333333


Q ss_pred             HcCCCCCceeceEEeeCCCc
Q 024839          229 LASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       229 l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ++.......||++|.+||+.
T Consensus       226 ~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         226 TISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHCCGGGTTCEECTTSCB
T ss_pred             HHHhcCccCCCcEEEECCeE
Confidence            33222334589999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.4e-43  Score=290.05  Aligned_cols=243  Identities=21%  Similarity=0.204  Sum_probs=198.3

Q ss_pred             CCCCCEEEEec--CCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-
Q 024839            5 RLQGKVAIIMG--AASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-   81 (262)
Q Consensus         5 ~~~~k~~lItG--~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-   81 (262)
                      -|+||++||||  |++|||+++|++|+++|++|++++|++++..+...+....+...++||++++++++.+++.+.+.+ 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            36899999999  457999999999999999999999998876544333333577889999999999999999998876 


Q ss_pred             --CCcCEEEeCCcCCC----CCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCc
Q 024839           82 --GSLDIMYSNAGVAG----PVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPH  155 (262)
Q Consensus        82 --~~~d~li~~ag~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  155 (262)
                        +++|++|||+|+..    ...++.+.+.++|.+.+++|+.+.+...+...+.+   . .+.+++++|.....+.+.+.
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM---N-PGGSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---E-EEEEEEEEECCCSSCCTTTH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc---c-cccccccccccccccCcccc
Confidence              56999999999752    23466788899999999999999998888776643   2 35566667777778888899


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-----cch------HhHHHhhhcccCC-CCCHHHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-----NDV------EGFVCKVANLKGI-VLKAKHVA  223 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~------~~~~~~~~~~~~~-~~~~~~va  223 (262)
                      .|+++|+|+.+|+|+++.||+++|||||+|+||++.|++.....     ...      .........|.++ +.+|+|++
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva  238 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999998753221     111      1111112235544 89999999


Q ss_pred             HHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          224 EAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       224 ~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +++.||+++.+.|+|||+|.||||++.+
T Consensus       239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         239 KTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHhCchhcCccCCEEEECcCcccc
Confidence            9999999999999999999999999654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.9e-42  Score=285.60  Aligned_cols=239  Identities=25%  Similarity=0.313  Sum_probs=191.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH-HHHHhhh---CCCceEEEEecCC----CHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG-NQVVSSI---GPEKASYRHCDVR----DEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~D~~----~~~~i~~~~~~~~~~   80 (262)
                      .+||||||++|||+++|++|+++|++|++++|+.++. +++.+++   ...+....++|+.    .++.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999996653 4444444   2356666766554    467788889999999


Q ss_pred             hCCcCEEEeCCcCCCCCCCc-----------CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhC----CCCcEEEEecCC
Q 024839           81 YGSLDIMYSNAGVAGPVGTI-----------LDLDMAQFDRTIATNLAGSVMAVKYAARVMVAN----KIRGSIICTTST  145 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~----~~~~~ii~isS~  145 (262)
                      +|++|++|||||+..+ .++           .+...+.+...+..|+.+++...+...+.+...    ...+.++++++.
T Consensus        82 ~g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 FGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HSCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             hCCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9999999999998643 222           123355677889999999998888877776542    225788999999


Q ss_pred             CccCCCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCC-CCCHHHHHH
Q 024839          146 ASTVGGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGI-VLKAKHVAE  224 (262)
Q Consensus       146 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~va~  224 (262)
                      .+..+.+.+.+|++||+|+++|+|+++.|++++|||||+|+||+++|++...  ++... ......|.+| ..+|||+++
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~--~~~~~-~~~~~~pl~r~~~~peeva~  237 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP--QETQE-EYRRKVPLGQSEASAAQIAD  237 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC--HHHHH-HHHTTCTTTSCCBCHHHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC--HHHHH-HHHhcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999999999999999999999999999987543  22222 2222345544 579999999


Q ss_pred             HHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          225 AALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       225 ~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +++||+++++.|+|||+|.+|||+++.
T Consensus       238 ~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         238 AIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhCchhCCccCCeEEECccHhhh
Confidence            999999999999999999999999873

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.5e-42  Score=282.16  Aligned_cols=223  Identities=18%  Similarity=0.177  Sum_probs=183.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS-   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-   83 (262)
                      ..|+||||||++|||+++|++|+++|+  .|++++|+.++++++.+..+ .+++++++|++++++++++++++.+.++. 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD-SRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCC-TTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhC-CceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            469999999999999999999999996  68889999998887765443 68999999999999999999999998764 


Q ss_pred             -cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----------CCcEEEEecCCCccCCC-
Q 024839           84 -LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----------IRGSIICTTSTASTVGG-  151 (262)
Q Consensus        84 -~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----------~~~~ii~isS~~~~~~~-  151 (262)
                       +|+||||||+.....++.+.+.++|++++++|+.|++.+++.++|+|++++          ..+.++++++....... 
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence             999999999876667888999999999999999999999999999998642          24788998886654332 


Q ss_pred             ------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHH
Q 024839          152 ------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEA  225 (262)
Q Consensus       152 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  225 (262)
                            ....+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|....                ...+||+.++.
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~----------------~~~~~e~~a~~  224 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN----------------AALTVEQSTAE  224 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------HHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC----------------CCCCHHHHHHH
Confidence                  23457999999999999999999999999999999999999986421                23588999999


Q ss_pred             HHHHcCCCCCceeceEEeeCC
Q 024839          226 ALFLASDESAYVSGHDLVVDG  246 (262)
Q Consensus       226 ~~~l~~~~~~~i~G~~i~~dg  246 (262)
                      ++..+.......+|++|..||
T Consensus       225 ~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         225 LISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHhcCCCCCCeEEECCCC
Confidence            988887766667899998885

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-43  Score=290.20  Aligned_cols=217  Identities=22%  Similarity=0.278  Sum_probs=186.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH-GAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+||||||++|||+++|++|+++ |++|++++|+.++++++.+++.  ..++.+++||++|.++++++++++.++++++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45699999999999999999986 8999999999999998888774  25788999999999999999999999999999


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------------  150 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------  150 (262)
                      +||||||+. ......+.+.++|++++++|+++++.+++.++|+|++   .|+||+++|..+..+               
T Consensus        84 iLVnNAGi~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          84 VLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEECCCCC-CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEcCCcC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhccc
Confidence            999999987 4567777888999999999999999999999999953   589999999765321               


Q ss_pred             --------------------------CCCCccchhhhHHHHHHHHHHHHHHCC----CCcEEEEEeCCCccCCCCCCCcc
Q 024839          151 --------------------------GSGPHAYTISKHGLLGLVRSAASELGK----HGIRVNCVSPFGVATPFSAGTIN  200 (262)
Q Consensus       151 --------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~pG~v~t~~~~~~~~  200 (262)
                                                .....+|++||+++.+|++.++.+|++    .||+||+|+||++.|+|....  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~--  237 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK--  237 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT--
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc--
Confidence                                      122357999999999999999999865    599999999999999986532  


Q ss_pred             chHhHHHhhhcccCCCCCHHHHHHHHHHHc--CCCCCceeceEEeeCC
Q 024839          201 DVEGFVCKVANLKGIVLKAKHVAEAALFLA--SDESAYVSGHDLVVDG  246 (262)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--~~~~~~i~G~~i~~dg  246 (262)
                                    ...+|+|+|+.++|++  .++..+++|+.+. |.
T Consensus       238 --------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 --------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             --------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             --------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                          2348999999999986  4555678999886 43

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.8e-43  Score=285.04  Aligned_cols=224  Identities=15%  Similarity=0.147  Sum_probs=190.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      +||+||||||++|||+++|++|+++|++|+++++.+....        .....+.+|..+.++.+.+.+.+.+.++  ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            4899999999999999999999999999999988765421        2445677888999999999888887764  69


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGL  164 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  164 (262)
                      |+||||||.......+.+.+.++|++++++|+.+++.+++.++|+|++   .|+||++||..+..+.+.+.+|++||+|+
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAV  149 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCccCCcccHHHHHHH
Confidence            999999997655556677788999999999999999999999999943   58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          165 LGLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       165 ~~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      ++|+++|+.|++  ++||+||+|+||+++||+.+...+.         .+..+..+|+++++.+.+|+++...+++|+.|
T Consensus       150 ~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             HHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             HHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc---------chhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            999999999998  5799999999999999875322111         12345678999999999999999999999877


Q ss_pred             ee---CCCccc
Q 024839          243 VV---DGGFTA  250 (262)
Q Consensus       243 ~~---dgG~~~  250 (262)
                      .|   ||+..+
T Consensus       221 ~v~~~~g~t~~  231 (236)
T d1dhra_         221 QVVTTDGKTEL  231 (236)
T ss_dssp             EEEEETTEEEE
T ss_pred             EEEEECCEEEE
Confidence            65   444433

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=276.50  Aligned_cols=216  Identities=24%  Similarity=0.250  Sum_probs=190.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++   ....+..+.+|+.+.+++..+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999999999998887764   235788999999999999999999999999


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      .+|+++||||.. ...++.+.+.++|.+++++|+.+++.+++.++|+|+++  +|+||++||..+..+.+...+|++||+
T Consensus        92 ~~~~li~nag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCC-CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccc-cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCCCchHHHHHHH
Confidence            999999999986 56788889999999999999999999999999999754  599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCC--CCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCC
Q 024839          163 GLLGLVRSAASELGK--HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       163 a~~~~~~~la~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (262)
                      |+.+|+++|+.|+++  .||+||+|+||+++|++........         +.....+||++++.+.......
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~---------~~~~~~~~e~~a~~i~~~~~~~  232 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI---------VHMQAAPKEECALEIIKGGALR  232 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG---------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC---------ccccCCCHHHHHHHHHHHhhcC
Confidence            999999999999974  5799999999999998754322211         1123468999999988766443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3e-40  Score=272.19  Aligned_cols=219  Identities=26%  Similarity=0.370  Sum_probs=168.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d~l   87 (262)
                      |+||||||++|||+++|++|+++|++|++++|++++               ..+|+.+.+..+....++..+. +++|++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~l   66 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEE
Confidence            799999999999999999999999999999987553               3579999999888776665554 579999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------------
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------------  150 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------------  150 (262)
                      |||||+..        ..+.|.....+|..+...+.+...+.+.+.. ...+.++++......                 
T Consensus        67 v~~Ag~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          67 VLCAGLGP--------QTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EECCCCCT--------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEcCCCCC--------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999752        2234788899999999999999999988766 566666665432211                 


Q ss_pred             -----------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch--HhHHHhhhcccCCCC
Q 024839          151 -----------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV--EGFVCKVANLKGIVL  217 (262)
Q Consensus       151 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~  217 (262)
                                 .+...+|++||+|+++|+|++|.||+++|||||+|+||+++||+........  .....+...|.+|+.
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g  217 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCc
Confidence                       1123469999999999999999999999999999999999999977653322  222233345889999


Q ss_pred             CHHHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          218 KAKHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       218 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +|+||++++.||+|+.+.|+|||+|.+|||++..
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav  251 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence            9999999999999999999999999999999763

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.8e-40  Score=270.20  Aligned_cols=223  Identities=17%  Similarity=0.138  Sum_probs=184.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH--hCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK--YGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~--~~~~d   85 (262)
                      +++||||||++|||+++|++|+++|++|++++|+++...        .....+.+|+.+.++.....+.+...  ++++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            356799999999999999999999999999999876421        23455678888888888777777775  47899


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      +||||||......++.+.+.++|+.++++|+.+++.+++.++|+|++   .|+||++||..+..+.+.+.+|++||+|+.
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH  150 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence            99999998654456666777889999999999999999999999853   589999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHH-HcCCCCCceeceEE
Q 024839          166 GLVRSAASELG--KHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALF-LASDESAYVSGHDL  242 (262)
Q Consensus       166 ~~~~~la~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~-l~~~~~~~i~G~~i  242 (262)
                      +|+++|+.|++  +.+|+||+|+||+++|++.+...++         .+..+..+|+++++.+++ +.++..+++||+.+
T Consensus       151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC---------CccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence            99999999998  4799999999999999875432211         123456799999999875 45556778999999


Q ss_pred             ee---CCCccc
Q 024839          243 VV---DGGFTA  250 (262)
Q Consensus       243 ~~---dgG~~~  250 (262)
                      .|   ||+.++
T Consensus       222 ~v~~~~g~~~~  232 (235)
T d1ooea_         222 KITTENGTSTI  232 (235)
T ss_dssp             EEEEETTEEEE
T ss_pred             EEEeeCCEEEE
Confidence            98   655544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.4e-31  Score=220.25  Aligned_cols=222  Identities=18%  Similarity=0.193  Sum_probs=170.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCch---hHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDE---LGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++.  ..++.+++||++|+++++++++.+.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            367999999999999999999999998 5888998743   3444444432  257899999999999999999988654


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhh
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTIS  160 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  160 (262)
                       +++|++|||+|.. ...++.+.+.++|...+++|+.+++++.+.+    ...+ .++||++||..+..+.+..+.|+++
T Consensus        88 -~~i~~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~-~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          88 -VPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELT----RELD-LTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             -SCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC-CSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             -ccccccccccccc-cccccccccHHHHHHHhhhhccchhHHHHHh----hccC-CceEeeecchhhccCCcccHHHHHH
Confidence             6899999999987 5678899999999999999999999887643    3334 7899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceece
Q 024839          161 KHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGH  240 (262)
Q Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~  240 (262)
                      |++++.|++.++.    .|+++++|+||++.++.....  ....   .........++|+++++.+..++.....  ...
T Consensus       161 ka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~--~~~~---~~~~~G~~~~~~~~~~~~l~~~l~~~~~--~~~  229 (259)
T d2fr1a1         161 NAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEG--PVAD---RFRRHGVIEMPPETACRALQNALDRAEV--CPI  229 (259)
T ss_dssp             HHHHHHHHHHHHH----TTCCCEEEEECCBC-----------------CTTTTEECBCHHHHHHHHHHHHHTTCS--SCE
T ss_pred             HHhHHHHHHHHHh----CCCCEEECCCCcccCCccccc--hHHH---HHHhcCCCCCCHHHHHHHHHHHHhCCCc--eEE
Confidence            9999988776654    599999999999876532211  1111   1111112357999999999998865542  234


Q ss_pred             EEeeCC
Q 024839          241 DLVVDG  246 (262)
Q Consensus       241 ~i~~dg  246 (262)
                      .+.+|.
T Consensus       230 v~~~d~  235 (259)
T d2fr1a1         230 VIDVRW  235 (259)
T ss_dssp             ECEECH
T ss_pred             EEeCcH
Confidence            455554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.5e-21  Score=167.07  Aligned_cols=224  Identities=13%  Similarity=0.106  Sum_probs=157.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHhhh--CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVSSI--GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .|+||||||+|.||++++++|.++|++|++++|....     .+.+.+..  ...++.++++|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            3899999999999999999999999999999986432     22222221  2257899999999999999998865   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------  149 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------  149 (262)
                        ++|++||.|+..+..     .+.++....+++|+.++..+++++...-. ++ ..++|++||...+.           
T Consensus        78 --~~d~v~h~aa~~~~~-----~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~-~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGL-EK-KTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             --CCSEEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TT-TCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEEeecccccc-----hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CC-CcEEEEEEchhhhCCCCCCCcCCCC
Confidence              799999999986432     23345677899999999999987754311 12 45899999865321           


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHhHHHh----hh--------cccCC
Q 024839          150 GGSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEGFVCK----VA--------NLKGI  215 (262)
Q Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~----~~--------~~~~~  215 (262)
                      +..+..+|+.||.+.+.+++.++..+   ++.+..++|+.+.+|.......  ........    ..        ...+.
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~  225 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeec
Confidence            11235689999999999999998885   7999999999999985432211  11111110    00        01123


Q ss_pred             CCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          216 VLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       216 ~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.++|+++++..++...    .|+.+++..|..+
T Consensus       226 ~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         226 WGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             ceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            778999999999888643    3677888777554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.82  E-value=4.8e-20  Score=157.75  Aligned_cols=224  Identities=14%  Similarity=0.082  Sum_probs=159.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEE-EeeCCchh--HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDEL--GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +||||||+|.||++++++|++.|+.|+ ++++....  ...........++.++.+|++|.++++++++..     ++|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            599999999999999999999999854 45543222  122222223468899999999999999888754     7999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCC----CCcEEEEecCCCccCC------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANK----IRGSIICTTSTASTVG------------  150 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~----~~~~ii~isS~~~~~~------------  150 (262)
                      |||+|+..+.     ..+.++..+.+++|+.+...+++++........    ...++|++||......            
T Consensus        77 VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          77 VMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999986531     123345577899999999999998877654311    1458999999764421            


Q ss_pred             ---------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHH---Hhhhc-------
Q 024839          151 ---------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFV---CKVAN-------  211 (262)
Q Consensus       151 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---~~~~~-------  211 (262)
                               ..+...|+.+|.+.+.+++.++..+   |+.+..++|+.+.+|...... ......   ..-..       
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~-~i~~~i~~~~~g~~~~v~g~g  227 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEK-LIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS-HHHHHHHHHHHTCCEEEETTS
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCc-HHHHHHHHHHcCCCcEEeCCC
Confidence                     1123569999999999999998875   899999999999998643321 111111   11110       


Q ss_pred             -ccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          212 -LKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       212 -~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                       ..+.++.++|+++++..++....   .|+.+++..|...
T Consensus       228 ~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         228 DQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             CeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence             11235789999999999986543   3778988777543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=1.5e-18  Score=149.78  Aligned_cols=213  Identities=13%  Similarity=0.028  Sum_probs=149.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh----------------H---HHHHhhhCCCceEEEEecCCCHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL----------------G---NQVVSSIGPEKASYRHCDVRDEK   68 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~----------------~---~~~~~~~~~~~~~~~~~D~~~~~   68 (262)
                      ||+||||||+|.||.+++++|+++|++|++++.....                .   ......+...++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998632110                0   11122223357899999999999


Q ss_pred             HHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCcc
Q 024839           69 QVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAST  148 (262)
Q Consensus        69 ~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~  148 (262)
                      .++++++..     ++|+|||.|+...  ......+.+.....+++|+.|+..+++++...    +....+++.||....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh----ccccceeeccccccc
Confidence            999998865     7999999998642  22334566778889999999999998876543    224567777765443


Q ss_pred             CC------------------------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc----
Q 024839          149 VG------------------------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN----  200 (262)
Q Consensus       149 ~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~----  200 (262)
                      ..                        ..+...|+.+|.+.+.+++.++.++   ++.+..++|+.+..|.......    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~~~~~~~~~~  226 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEEL  226 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCcccccccccc
Confidence            21                        1223469999999999999988874   8999999999998874321100    


Q ss_pred             ------------chHhHHHhh-----------hcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          201 ------------DVEGFVCKV-----------ANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       201 ------------~~~~~~~~~-----------~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                                  .........           ....+.++.++|+++++..++....
T Consensus       227 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~  283 (393)
T d1i24a_         227 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA  283 (393)
T ss_dssp             CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC
T ss_pred             ccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhc
Confidence                        011111111           0111235679999999999986543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=2.4e-22  Score=157.20  Aligned_cols=153  Identities=13%  Similarity=0.133  Sum_probs=112.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            3 KPRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         3 ~~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.. .++....+|+++.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            4579999999999999999999999999999999999999998888777643 35567899999998887765       


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-CCCccchhh
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-SGPHAYTIS  160 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~s  160 (262)
                      +++|+||||||+. .    ...+.++|++.+++|+.+.++....+.+.+....  .....+++.....+. .+...|.++
T Consensus        91 ~~iDilin~Ag~g-~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 KGAHFVFTAGAIG-L----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             TTCSEEEECCCTT-C----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             cCcCeeeecCccc-c----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEeccCcCcHHHHHH
Confidence            4799999999863 2    2468899999999998887766544333222211  222222222222111 123469999


Q ss_pred             hHHHHHHHH
Q 024839          161 KHGLLGLVR  169 (262)
Q Consensus       161 K~a~~~~~~  169 (262)
                      |+++..|++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999887764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.1e-18  Score=147.78  Aligned_cols=224  Identities=14%  Similarity=0.148  Sum_probs=157.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH---HHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG---NQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++|||||+|.||+++++.|+++|++|++++|.....   ....+.....++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            499999999999999999999999999987643221   12222233357999999999999998888753     6999


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC------------CCC
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG------------SGP  154 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~  154 (262)
                      |||.|+..+.     ..+.++..+.+++|+.++..+++++...    + -.++|++||.....+.            .+.
T Consensus        77 ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          77 VIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHh----C-CCEEEecCcceEEccccccccccccccCCCc
Confidence            9999986421     1234456688999999999998877653    3 4689999887654321            235


Q ss_pred             ccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCC--------ccchHhHH-Hhh---h------------
Q 024839          155 HAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGT--------INDVEGFV-CKV---A------------  210 (262)
Q Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~-~~~---~------------  210 (262)
                      ..|+.+|.+.+.+++....+.  .++.+..++|+.+.++.....        ........ ...   .            
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            689999999999999877774  578999999999887643211        11111111 100   0            


Q ss_pred             ---cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 ---NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ---~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                         ...+.++..+|++.+...+.........++++++.++..+
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence               0012256789999777665543344456788999887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=2.1e-18  Score=145.69  Aligned_cols=213  Identities=13%  Similarity=0.033  Sum_probs=150.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-----hHH---HHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-----LGN---QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-----~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |+||||||+|.||++++++|.++|++|+.++|...     ...   ..........+.++.+|+.+.+++.+.++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999998543     111   1122223357889999999999998888754   


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------  150 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  150 (262)
                        ++|+|||.|+....     ..+.++....+..|+.+...+..++...........++++.||......          
T Consensus        79 --~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence              89999999987522     1234556788899999999998887766544332446666666543221          


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc--hHhHHHh----h-h-------cccCCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND--VEGFVCK----V-A-------NLKGIV  216 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~~----~-~-------~~~~~~  216 (262)
                      ..+...|+.+|.+.+.+++.++..+   ++.+..++|+.+.+|........  .......    . .       ...+.+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            2345689999999999999988874   79999999999999864332111  1100000    0 0       011236


Q ss_pred             CCHHHHHHHHHHHcCCCC
Q 024839          217 LKAKHVAEAALFLASDES  234 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~~  234 (262)
                      +.++|++.++..++..+.
T Consensus       229 ~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             EEHHHHHHHHHHHHTSSS
T ss_pred             eeeehHHHHHHHHHhcCC
Confidence            789999999999987654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.79  E-value=3.6e-18  Score=144.81  Aligned_cols=219  Identities=15%  Similarity=0.088  Sum_probs=150.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh---hCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS---IGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +||+||||||+|.||++++++|.++|++|+.+.|+..+...+.+.   ... .....+..|+.+.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            589999999999999999999999999999999987665544322   222 344567789999988877665       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------  151 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------  151 (262)
                      ..|+++|+++....     ..+   ....++.|+.++..+++.+..    .+...++|++||..+....           
T Consensus        83 ~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~----~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAA----TPSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHT----CTTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhc----ccccccccccccceeeccCCCCCCCccccc
Confidence            68999999986521     122   345678899998888776543    2225799999997543211           


Q ss_pred             --------------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHhHHHhh
Q 024839          152 --------------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEGFVCKV  209 (262)
Q Consensus       152 --------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~  209 (262)
                                          ....+|+.+|.+.+.+++.++++.. .++++..++|+.+.+|.......  .........
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l  229 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL  229 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHH
Confidence                                0123699999999999999988864 46888999999888875432211  111111110


Q ss_pred             ----------hcccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          210 ----------ANLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       210 ----------~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                                ..+.+.++.++|+|++....+....  ..|+.+...++
T Consensus       230 ~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~  275 (342)
T d1y1pa1         230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAG  275 (342)
T ss_dssp             HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCE
T ss_pred             HcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCC
Confidence                      0122336789999999877765432  35666655544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=2.3e-18  Score=144.37  Aligned_cols=221  Identities=16%  Similarity=0.086  Sum_probs=153.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-HHHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-QVVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      |+||||||+|.||++++++|.++|++|+.++|...... ...+.+ ...++.++.+|++|.+++.+++...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            78999999999999999999999999999998754321 222222 2357899999999999998888765     6788


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccC-----------CCCCCc
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTV-----------GGSGPH  155 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~~~~  155 (262)
                      ++|+++....  .   ...++..+.+..|+.++..++.++...    +...++++.||..-..           +.....
T Consensus        76 ~~~~a~~~~~--~---~~~~~~~~~~~~n~~g~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          76 VYNLAAQSFV--G---ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             EEECCSCCCH--H---HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccccccccc--c---ccccchHHHHhhhhhchHHHHHHHHHh----CCCcccccccchhhcCcccCCCCCCCCCccccC
Confidence            8888875421  1   112335688899999999988876542    3245666666643221           112456


Q ss_pred             cchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cchHhHHHh----hhc--------ccCCCCCHHH
Q 024839          156 AYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDVEGFVCK----VAN--------LKGIVLKAKH  221 (262)
Q Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~----~~~--------~~~~~~~~~~  221 (262)
                      .|+.+|.+.+.+++.++.++   ++.+..++|+.+++|......  .........    ...        ..+.++.++|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            89999999999999998885   789999999999988643321  111111111    000        1123689999


Q ss_pred             HHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          222 VAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       222 va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +++++..++..+.    +..+++.+|...
T Consensus       224 ~~~~~~~~~~~~~----~~~~ni~~~~~~  248 (321)
T d1rpna_         224 YVEAMWLMLQQDK----ADDYVVATGVTT  248 (321)
T ss_dssp             HHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             HHHHHHHHHhcCC----cCCceecccccc
Confidence            9999999986553    345666666433

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.6e-18  Score=145.20  Aligned_cols=212  Identities=17%  Similarity=0.137  Sum_probs=144.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch-hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE-LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      |+||||||+|.||++++++|.++|++|+++++... ..+.........++.....|+.+.     +       +.++|+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~-------~~~~d~V   69 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----L-------YIEVDQI   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----C-------CCCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-----H-------HcCCCEE
Confidence            78999999999999999999999999999886432 222222223334555666665432     1       2369999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC----------------C
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG----------------G  151 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~----------------~  151 (262)
                      ||+|+..+.  .   .+.++..+.+++|+.+...+++++..    .+  .++|++||.+.+..                .
T Consensus        70 ihlAa~~~~--~---~~~~~~~~~~~~Nv~g~~~ll~~~~~----~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          70 YHLASPASP--P---NYMYNPIKTLKTNTIGTLNMLGLAKR----VG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             EECCSCCSH--H---HHTTCHHHHHHHHHHHHHHHHHHHHH----HT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EECcccCCc--h---hHHhCHHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            999986521  1   11234567889999999999887643    22  48999998654421                1


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-hHhHHHh----hh-------cccCCCCCH
Q 024839          152 SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-VEGFVCK----VA-------NLKGIVLKA  219 (262)
Q Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~----~~-------~~~~~~~~~  219 (262)
                      .+...|+.+|.+.+.+++.++.++   |+.+..++|+.+.+|........ .......    ..       ...+.++..
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v  215 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  215 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence            234679999999999999999885   89999999999999864433211 1111111    11       111346789


Q ss_pred             HHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          220 KHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       220 ~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +|+++++..++....    +..+++.+|..+
T Consensus       216 ~D~~~~~~~~~~~~~----~~~~n~~~~~~~  242 (312)
T d2b69a1         216 SDLVNGLVALMNSNV----SSPVNLGNPEEH  242 (312)
T ss_dssp             HHHHHHHHHHHTSSC----CSCEEESCCCEE
T ss_pred             HHHHHHHHHHHhhcc----CCceEecCCccc
Confidence            999999998885542    456888777554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.5e-18  Score=143.57  Aligned_cols=209  Identities=11%  Similarity=0.024  Sum_probs=146.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh-----HHHHHh---hhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL-----GNQVVS---SIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~---~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +||||||+|.||++++++|.++|++|+.++|....     .+.+..   .....++.++.+|++|.+.+.++++..    
T Consensus         3 I~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   78 (347)
T d1t2aa_           3 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV----   78 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc----
Confidence            34999999999999999999999999999986432     111111   111247889999999999999988765    


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------  150 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------  150 (262)
                       .+++++|.++....     ..+.++....+++|+.++..+++++..+-.. + ..++|++||.+.+..           
T Consensus        79 -~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~-~~~~i~~SS~~vyg~~~~~~~~E~~~  150 (347)
T d1t2aa_          79 -KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQKETTP  150 (347)
T ss_dssp             -CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             -ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC-C-CcEEEEecchheecCCCCCCCCCCCC
Confidence             78899999886421     1234556677899999999998877654211 1 358999998654311           


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--chHh-HHHh---hh--------cccCCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--DVEG-FVCK---VA--------NLKGIV  216 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~-~~~~---~~--------~~~~~~  216 (262)
                      ..+...|+.||.+.+.+++.++..+   ++.+..++|+.+++|-......  .... ....   ..        ...+.+
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~  227 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  227 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee
Confidence            1234579999999999999988774   7899999999999874332211  0000 0000   00        112347


Q ss_pred             CCHHHHHHHHHHHcCCC
Q 024839          217 LKAKHVAEAALFLASDE  233 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~~  233 (262)
                      +.++|+++++..++...
T Consensus       228 i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         228 GHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EEHHHHHHHHHHHHHSS
T ss_pred             eEecHHHHHHHHHhhcC
Confidence            89999999999988654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.7e-17  Score=129.43  Aligned_cols=198  Identities=18%  Similarity=0.114  Sum_probs=133.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ..|+++||||+|+||++++++|+++|++|.++.|+.++...    .....+.++.+|++|.++++++++       ..|+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~gD~~d~~~l~~al~-------~~d~   70 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----EGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc----ccccccccccccccchhhHHHHhc-------CCCE
Confidence            36889999999999999999999999999999999876532    223568899999999999888776       6899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCC----ccchhhhH
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGP----HAYTISKH  162 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~----~~Y~~sK~  162 (262)
                      ||+++|.....   ...         +++..+...++    +.+++.+ -.++|++||..........    ..|...|.
T Consensus        71 vi~~~g~~~~~---~~~---------~~~~~~~~~l~----~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~  133 (205)
T d1hdoa_          71 VIVLLGTRNDL---SPT---------TVMSEGARNIV----AAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (205)
T ss_dssp             EEECCCCTTCC---SCC---------CHHHHHHHHHH----HHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEEEeccCCch---hhh---------hhhHHHHHHHH----HHHHhcC-CCeEEEEeeeeccCCCccccccccccchHHH
Confidence            99999864221   111         12223333333    3444545 6799999987665443322    23444444


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCceeceEE
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAYVSGHDL  242 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i  242 (262)
                      +.+.+.       ...|++...|+||.+......+......     .......+++.+|+|+.++..+.++.  ..|+.+
T Consensus       134 ~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~  199 (205)
T d1hdoa_         134 RMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTVTL-----DGRGPSRVISKHDLGHFMLRCLTTDE--YDGHST  199 (205)
T ss_dssp             HHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEEES-----SSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEE
T ss_pred             HHHHHH-------HhcCCceEEEecceecCCCCcccEEEee-----CCCCCCCcCCHHHHHHHHHHHhCCCC--CCCEEE
Confidence            444332       3468999999999886543222211100     01122456799999999999997653  348888


Q ss_pred             eeCC
Q 024839          243 VVDG  246 (262)
Q Consensus       243 ~~dg  246 (262)
                      .+.+
T Consensus       200 ~~s~  203 (205)
T d1hdoa_         200 YPSH  203 (205)
T ss_dssp             EEEC
T ss_pred             ecCC
Confidence            7654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.77  E-value=4.9e-18  Score=144.12  Aligned_cols=216  Identities=12%  Similarity=0.078  Sum_probs=148.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC--chh-HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ--DEL-GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~--~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|+||||||+|.||++++++|.++|+.|.++.+.  ... .....+.+...++.++.+|+.|.+.+.++++       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            4689999999999999999999999875544332  111 1112223344689999999999998888765       68


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC--------------
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG--------------  150 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~--------------  150 (262)
                      |.++|.|+....     .....+..+.+++|+.+...++......      +.++|++||......              
T Consensus        75 ~~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          75 DAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             SEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccccCc
Confidence            889999986522     1122345678899999999998766542      347777777653311              


Q ss_pred             ---------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHH---hh--------h
Q 024839          151 ---------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVC---KV--------A  210 (262)
Q Consensus       151 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~---~~--------~  210 (262)
                               ..+...|+.+|.+.+.+++.++.++   |+++..++|+.+.+|....... ......   ..        .
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~-~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKF-IPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSH-HHHHHHHHHHTCCCEEETTS
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccch-hHHHHHHHHcCCceeEeCCC
Confidence                     1123579999999999999998874   8999999999999975332211 111110   00        1


Q ss_pred             cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          211 NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       211 ~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                      ...+.++..+|+++++..++.....   |..+++.+|-
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~~~~---~~~~~~~~~~  254 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTKGRM---GETYLIGADG  254 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHHCCT---TCEEEECCSC
T ss_pred             CccccccchhhHHHHHHHHHhhccc---Cccccccccc
Confidence            1223477899999999988865532   5555555554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.3e-17  Score=141.33  Aligned_cols=225  Identities=12%  Similarity=0.111  Sum_probs=156.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc---------hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD---------ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      |+||||||+|.||++++++|+++|++|+.+++..         ....+..+.....++.++.+|++|.+.+++++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            7899999999999999999999999999986421         1112223334446889999999999999887764   


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--------
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--------  151 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------  151 (262)
                        ..+|+++|.|+..+.     ..+.++..+.+++|+.+...+++++..    .+ -.++++.||.......        
T Consensus        80 --~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~-v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             --CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             --cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhh----cC-cccccccccceeeecccccccccc
Confidence              368899999997532     123344567899999999888876543    33 4578888887654321        


Q ss_pred             ----CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCC--------CccchHhHHHh----hh-----
Q 024839          152 ----SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAG--------TINDVEGFVCK----VA-----  210 (262)
Q Consensus       152 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~--------~~~~~~~~~~~----~~-----  210 (262)
                          ....+|+.+|.+.+..++.++..  ..++....++|+.+.++-...        ...........    ..     
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  225 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEE
Confidence                23457999999999999887764  357889999998887763211        11111111110    00     


Q ss_pred             ----------cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          211 ----------NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       211 ----------~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                                ...+.++.++|++.++..+.........++++++.+|..+
T Consensus       226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence                      0113468999999988887544444456889999888654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=9.5e-18  Score=143.13  Aligned_cols=217  Identities=13%  Similarity=0.088  Sum_probs=153.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++++||||||+|.||++++++|.++|++|+++++.......  ...  ....+..+|+.+.+.+.++++       .+|.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d~   82 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--EDM--FCDEFHLVDLRVMENCLKVTE-------GVDH   82 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GGG--TCSEEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hhc--ccCcEEEeechhHHHHHHHhh-------cCCe
Confidence            46789999999999999999999999999998775443111  111  345678899999887766654       7899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC---------------
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG---------------  151 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------------  151 (262)
                      |||.|+.....    ....+.....+.+|+.++..++.++..    .+ ..++|++||.......               
T Consensus        83 Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~  153 (363)
T d2c5aa1          83 VFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIYPEFKQLETTNVSLKESDA  153 (363)
T ss_dssp             EEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             Eeecccccccc----cccccccccccccccchhhHHHHhHHh----hC-ccccccccccccccccccccccccccccccC
Confidence            99999865221    112344677888999999888887654    23 5689999997654321               


Q ss_pred             ---CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cc--hHhHH---Hhhh--------ccc
Q 024839          152 ---SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--ND--VEGFV---CKVA--------NLK  213 (262)
Q Consensus       152 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~--~~~~~---~~~~--------~~~  213 (262)
                         .+...|+.+|.+.+.+++.+..++   |+.+..++|+.+.++......  ..  .....   ....        ...
T Consensus       154 ~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  230 (363)
T d2c5aa1         154 WPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT  230 (363)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCE
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeE
Confidence               234579999999999999998885   899999999999987432221  10  00000   0000        112


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          214 GIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      +.++..+|+++++..++..+    .|+.+++.+|..+
T Consensus       231 rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         231 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             ECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            34788999999999988644    3677888888655

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=8.4e-18  Score=142.34  Aligned_cols=222  Identities=16%  Similarity=0.081  Sum_probs=157.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch----hHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE----LGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +-|++|||||+|.||++++++|.++|++|+.++|...    ..........   ..++.++.+|..|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            4689999999999999999999999999999876322    2222221111   1578899999999877665443    


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------  150 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------  150 (262)
                         ..+.++|.++....     ..+.++....+++|+.++..+++++..    .+ ..++|++||...+..         
T Consensus        91 ---~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~-~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARD----AK-VQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ---TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ---cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHh----cC-CceEEEcccceeeCCCCCCCccCC
Confidence               68999999875421     124567788999999999999887654    23 469999999775432         


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cch-----HhHHHhhh-------cccC
Q 024839          151 --GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--NDV-----EGFVCKVA-------NLKG  214 (262)
Q Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~-----~~~~~~~~-------~~~~  214 (262)
                        ..+...|+.+|.+.+.+++.++...   ++++..++|+.+.++......  ...     ........       ...+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEE
Confidence              2234689999999999999998875   789999999999887543221  111     11111110       1123


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCcc
Q 024839          215 IVLKAKHVAEAALFLASDESAYVSGHDLVVDGGFT  249 (262)
Q Consensus       215 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~~  249 (262)
                      .++.++|++.++..++..... ..|+.+++..+..
T Consensus       235 ~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~  268 (341)
T d1sb8a_         235 DFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGR  268 (341)
T ss_dssp             CCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCC
T ss_pred             EEEEEeccchhhhhhhhcccc-ccceeeeeccccc
Confidence            477889999999888765432 4577888776643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=7.5e-18  Score=142.58  Aligned_cols=215  Identities=13%  Similarity=0.150  Sum_probs=150.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      +||||||+|.||++++++|+++| ++|+.+++..+.....   ....++.++++|+++.+++.+.+.   +   ++|+||
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~---~~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~Vi   72 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHV---K---KCDVVL   72 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---TTCTTEEEEECCTTTCSHHHHHHH---H---HCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh---ccCCCeEEEECccCChHHHHHHHH---h---CCCccc
Confidence            59999999999999999999999 5899888776544332   234679999999998766654322   1   589999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------------
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------------  151 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------------  151 (262)
                      |+|+....     ....++..+.+.+|+.+...+++++..    .  +.++++.||.......                 
T Consensus        73 h~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~~----~--~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          73 PLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             ECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             cccccccc-----cccccCCcccccccccccccccccccc----c--ccccccccccccccccccccccccccccccccc
Confidence            99997532     112334467899999999999988653    2  3466677665543221                 


Q ss_pred             -CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-------cchHhHHHhh-----------hcc
Q 024839          152 -SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-------NDVEGFVCKV-----------ANL  212 (262)
Q Consensus       152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~~~~~~~~~-----------~~~  212 (262)
                       .+...|+.+|.+.+.+++.+++.+   |+.+..++|..+.++......       ..........           ...
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  218 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  218 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC
T ss_pred             CCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCe
Confidence             123469999999999999998885   899999999999887433321       0111111110           011


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCC
Q 024839          213 KGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGG  247 (262)
Q Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG  247 (262)
                      .+.++..+|+++++..++........|+.+++..|
T Consensus       219 ~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            13377999999999999976544445899999544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.75  E-value=1.9e-18  Score=145.31  Aligned_cols=218  Identities=15%  Similarity=0.136  Sum_probs=153.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEe------eCCc--hhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIA------DIQD--ELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~------~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++|||||+|.||++++++|.++|++|..+      ++..  .............++.++..|..+.........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR------   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc------
Confidence            59999999999999999999999865443      2221  111112222233678999999999877765433      


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------  151 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------  151 (262)
                       .+|.++|.|+....     ........+.+++|+.++..+++++..    .+ ..++|++||.....+.          
T Consensus        76 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          76 -GVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVD----AG-VGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             -TCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             -ccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHH----cC-CceEEEeecceeecCCCCCCCCCCCC
Confidence             79999999986421     123445667889999999999887753    33 5689999997654332          


Q ss_pred             -CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHh----hh-------cccCCCCCH
Q 024839          152 -SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCK----VA-------NLKGIVLKA  219 (262)
Q Consensus       152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~  219 (262)
                       .+...|+.+|.+.+.+++.+++++   |+.+..++|+.+++|...... -.......    ..       ...+.++..
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~-~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v  220 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK-LIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS-HHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCc-HHHHHHHHHHcCCCcEEecCCCeEEccEEH
Confidence             234689999999999999999885   899999999999998543221 11111111    10       111236799


Q ss_pred             HHHHHHHHHHcCCCCCceeceEEeeCCCcccc
Q 024839          220 KHVAEAALFLASDESAYVSGHDLVVDGGFTAV  251 (262)
Q Consensus       220 ~~va~~~~~l~~~~~~~i~G~~i~~dgG~~~~  251 (262)
                      +|+++++..++....   .|+.+++..|...+
T Consensus       221 ~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         221 DDHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             HHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             HHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence            999999999997654   47889988776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=1.7e-17  Score=140.81  Aligned_cols=169  Identities=15%  Similarity=0.177  Sum_probs=126.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh---HHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL---GNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      |+||||||+|.||++++++|+++|++|+++++....   .....+.....++.++.+|+.|.++++++++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            789999999999999999999999999998753221   111122333367889999999999998887743     799


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC---------------
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG---------------  150 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------  150 (262)
                      +|||+|+....     ....+.....+.+|+.+...+++++...    + ..++|++||...+..               
T Consensus        77 ~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~----~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          77 SVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY----N-VSKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             EEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             EEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc----c-cceEEeecceeeecCcccCCCCCccccccC
Confidence            99999996521     1123344678889999999998877542    2 458999999665421               


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCC
Q 024839          151 GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATP  193 (262)
Q Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~  193 (262)
                      ..+...|+.+|.+.+.+++.+.... ..++.+..++|+.+..+
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence            1234579999999999999887653 34788888888877654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.74  E-value=7.8e-17  Score=135.48  Aligned_cols=220  Identities=16%  Similarity=0.136  Sum_probs=146.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch--hHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE--LGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +||||||+|.||++++++|.++|++|+++++...  ............++.++.+|+.+.+++.++++..     ++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            5899999999999999999999999999875322  2222222223367899999999999999988765     79999


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------------
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------------  151 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------  151 (262)
                      ||+|+....     ....++....+++|+.|+..+++++...    + ..+.+++||..+..+.                
T Consensus        77 ih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY----N-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----C-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc----c-cccccccccccccccccccccccccccccccc
Confidence            999987521     1223456789999999999999876542    3 3445555554432221                


Q ss_pred             ------------CCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc-cc-hHhHHHhh-------h
Q 024839          152 ------------SGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI-ND-VEGFVCKV-------A  210 (262)
Q Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~-~~~~~~~~-------~  210 (262)
                                  .....|+.+|...+.+.......+   ++....+.|..+..+...... .. ........       .
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        134579999999999999888886   556655555555433222211 11 01111000       0


Q ss_pred             ---------cccCCCCCHHHHHHHHHHHcCCCCCceeceEEeeCCCc
Q 024839          211 ---------NLKGIVLKAKHVAEAALFLASDESAYVSGHDLVVDGGF  248 (262)
Q Consensus       211 ---------~~~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgG~  248 (262)
                               ...+.++..+|+++++..++.... ...|+++++.+|.
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~-~~~~~~~~i~~~~  269 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALANVS-KIRGNAFNIGGTI  269 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH-HHTTCEEEESSCG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhccc-cccCccccccccc
Confidence                     011235679999999999885432 3568888887664

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.74  E-value=1.7e-16  Score=134.58  Aligned_cols=213  Identities=17%  Similarity=0.095  Sum_probs=151.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG-PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++||+||||||+|.||+++++.|.++|++|++++|+........+... ...+.++.+|++|++.+.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            479999999999999999999999999999999998776554443332 247899999999999998888755     79


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC------------CC
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG------------GS  152 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~------------~~  152 (262)
                      |+++|.|+....     ..+.+.....+++|+.+...+++++...   .. ...+++.|+......            ..
T Consensus        81 ~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-VKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-CCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhccccc-----cccccCCccccccccccchhhhhhhhcc---cc-ccccccccccccccccccccccccccccC
Confidence            999999986422     1234556788999999999888876542   22 445555555443321            12


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCC------CCcEEEEEeCCCccCCCCCCCccchHhHHHhhh----------cccCCC
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGK------HGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA----------NLKGIV  216 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~------~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~----------~~~~~~  216 (262)
                      +...|+.+|.+.+.+.+.++.++..      +++.+..++|+.+.+|.......-.........          .....+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            3457999999999999998887643      478999999999988753222111111111100          111235


Q ss_pred             CCHHHHHHHHHHHcCC
Q 024839          217 LKAKHVAEAALFLASD  232 (262)
Q Consensus       217 ~~~~~va~~~~~l~~~  232 (262)
                      ...+|++.++..++..
T Consensus       232 ~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             EETHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhh
Confidence            5789999998877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=3.1e-16  Score=125.27  Aligned_cols=217  Identities=10%  Similarity=0.000  Sum_probs=140.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe--EEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAF--VIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      -++||||||+|+||++++++|+++|+.  |+...|++++....    . .++.++.+|+.+.+++.++++       .+|
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~----~-~~~~~~~~d~~~~~~~~~~~~-------~~d   70 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G-GEADVFIGDITDADSINPAFQ-------GID   70 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T-CCTTEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc----c-CCcEEEEeeeccccccccccc-------cce
Confidence            368999999999999999999999976  44556766554322    2 467899999999999887776       689


Q ss_pred             EEEeCCcCCCCCCC--------cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccc
Q 024839           86 IMYSNAGVAGPVGT--------ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAY  157 (262)
Q Consensus        86 ~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y  157 (262)
                      .+||+++.......        ........+.....+|+.+...+.......    . .+...+.++.....+......+
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----c-ccccccccccccCCCCcccccc
Confidence            99999986431111        011112335566678888887777655433    2 5777888776665554433333


Q ss_pred             hhhh-HHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCCc
Q 024839          158 TISK-HGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVANLKGIVLKAKHVAEAALFLASDESAY  236 (262)
Q Consensus       158 ~~sK-~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (262)
                      ..++ .........+..+   .|+++..++||.+.++.......... ...........+++++|+|++++.++..+.  
T Consensus       146 ~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~--  219 (252)
T d2q46a1         146 GNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVG-KDDELLQTDTKTVPRADVAEVCIQALLFEE--  219 (252)
T ss_dssp             GGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEE-STTGGGGSSCCEEEHHHHHHHHHHHTTCGG--
T ss_pred             cccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhc-cCcccccCCCCeEEHHHHHHHHHHHhCCcc--
Confidence            3333 3333333333333   68999999999998875432211100 000111122457789999999999886653  


Q ss_pred             eeceEEeeCCC
Q 024839          237 VSGHDLVVDGG  247 (262)
Q Consensus       237 i~G~~i~~dgG  247 (262)
                      ..|+++++.++
T Consensus       220 ~~g~~~~i~~~  230 (252)
T d2q46a1         220 AKNKAFDLGSK  230 (252)
T ss_dssp             GTTEEEEEEEC
T ss_pred             ccCcEEEEeeC
Confidence            45899988654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.69  E-value=2.4e-16  Score=135.30  Aligned_cols=172  Identities=19%  Similarity=0.181  Sum_probs=124.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEeeCC---------chhHHH---HHhhh-------CCCceEEEEecCCCH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAE-HGAFVIIADIQ---------DELGNQ---VVSSI-------GPEKASYRHCDVRDE   67 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~r~---------~~~~~~---~~~~~-------~~~~~~~~~~D~~~~   67 (262)
                      +.+||||||+|.||++++++|++ .|++|+++++-         .+..+.   ..+..       .+..+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34799999999999999999986 68999998641         111111   11111       124678999999999


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCc
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTAS  147 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~  147 (262)
                      +.++++++.    ..++|+|||.|+....     ....+.....+++|+.+...++.++..    .+ ..+++++++...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~----~~-~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLL----HK-CDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhc----cC-Cccccccccccc
Confidence            888887764    3578999999987522     123344567888999999988877653    23 456766666543


Q ss_pred             cCC------------------CCCCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCC
Q 024839          148 TVG------------------GSGPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSA  196 (262)
Q Consensus       148 ~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~  196 (262)
                      ...                  ..+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+++|...
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence            321                  1235689999999999999998874   899999999999887543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.7e-16  Score=131.31  Aligned_cols=190  Identities=16%  Similarity=0.174  Sum_probs=136.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |+||||||+|.||++++++|+++|+.|+++++..+                  +|+.+.+.+.++++.-     .+|.++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~------------------~~~~~~~~~~~~~~~~-----~~d~v~   59 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLDSRAVHDFFASE-----RIDQVY   59 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh------------------ccccCHHHHHHHHhhc-----CCCEEE
Confidence            68999999999999999999999999887755422                  5899998888877532     799999


Q ss_pred             eCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC----------------C
Q 024839           89 SNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG----------------S  152 (262)
Q Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------~  152 (262)
                      |+|+..+..    .....+..+.+++|+.++..+++++..    .+ -.++|++||.+.+.+.                +
T Consensus        60 ~~a~~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          60 LAAAKVGGI----VANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  130 (315)
T ss_dssp             ECCCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             Ecchhcccc----ccchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECCceEcCCCCCCCccCCccccCCCCC
Confidence            999765210    123344566788999999998887654    23 4589999998765321                1


Q ss_pred             CCccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc------hHh--HHHhh-----------hccc
Q 024839          153 GPHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND------VEG--FVCKV-----------ANLK  213 (262)
Q Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~--~~~~~-----------~~~~  213 (262)
                      ...+|+.+|.+.+.+++.++.+.   |+++..++|+.+.+|........      ...  .....           ..+.
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  207 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  207 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE
Confidence            12469999999999999998885   89999999999998754322110      000  00000           0122


Q ss_pred             CCCCCHHHHHHHHHHHcCCC
Q 024839          214 GIVLKAKHVAEAALFLASDE  233 (262)
Q Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (262)
                      +.+...+|++.++..+....
T Consensus       208 ~~~~~v~d~~~~~~~~~~~~  227 (315)
T d1e6ua_         208 REFLHVDDMAAASIHVMELA  227 (315)
T ss_dssp             ECEEEHHHHHHHHHHHHHSC
T ss_pred             EEEEEeehhHHHHHHhhhhc
Confidence            44668899999998887443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.9e-16  Score=125.86  Aligned_cols=195  Identities=15%  Similarity=0.093  Sum_probs=134.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .|++|+||||||+|.||++++++|.++|+  +|++++|++.......    ...+....+|+.+.+++.+.++       
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~~~~~-------   79 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASAFQ-------   79 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGGGS-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeeccccccccccccc-------
Confidence            46789999999999999999999999995  7999998765432211    1356677788888766654444       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ..|++||++|..        .......+...+|+.++..+++++.    +.+ -.++|++|+..+....  ...|+.+|.
T Consensus        80 ~~d~vi~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~----~~~-v~~fi~~Ss~~~~~~~--~~~Y~~~K~  144 (232)
T d2bkaa1          80 GHDVGFCCLGTT--------RGKAGAEGFVRVDRDYVLKSAELAK----AGG-CKHFNLLSSKGADKSS--NFLYLQVKG  144 (232)
T ss_dssp             SCSEEEECCCCC--------HHHHHHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCTTC--SSHHHHHHH
T ss_pred             cccccccccccc--------ccccchhhhhhhcccccceeeeccc----ccC-ccccccCCccccccCc--cchhHHHHH
Confidence            789999999853        2334556778889999888887654    334 5689999998765443  457999999


Q ss_pred             HHHHHHHHHHHHHCCCCc-EEEEEeCCCccCCCCCCCccchHhHHHhhhc------ccCCCCCHHHHHHHHHHHcCCCC
Q 024839          163 GLLGLVRSAASELGKHGI-RVNCVSPFGVATPFSAGTINDVEGFVCKVAN------LKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ..+...+.       .+. ++..++||.+.++........  ........      .....++++|+|++++..+..+.
T Consensus       145 ~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         145 EVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGE--WLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHH--HHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             Hhhhcccc-------ccccceEEecCceeecCCCcCcHHH--HHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            88765542       244 578899999988754322111  11111111      11335688999999888875554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.49  E-value=2.5e-13  Score=110.82  Aligned_cols=194  Identities=16%  Similarity=0.107  Sum_probs=127.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|.||++++++|.++|++|+.++|..                   +|+.|.++++++++..     ++|+|||
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~-----~~d~vih   58 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEK-----KPNVVIN   58 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHc-----CCCEEEe
Confidence            599999999999999999999999999988753                   4899999998888755     7899999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCC-----------CCCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVG-----------GSGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y~  158 (262)
                      +|+....     +.........++.|+.....+.......      ...+++.||......           ......|+
T Consensus        59 ~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~  127 (281)
T d1vl0a_          59 CAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG  127 (281)
T ss_dssp             CCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred             ecccccc-----ccccccchhhcccccccccccccccccc------cccccccccceeeeccccccccccccccchhhhh
Confidence            9986421     1222334566777777766665544332      345666665443221           12345688


Q ss_pred             hhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccchHhHHHhhh------cccCCCCCHHHHHHHHHHHcCC
Q 024839          159 ISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDVEGFVCKVA------NLKGIVLKAKHVAEAALFLASD  232 (262)
Q Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~va~~~~~l~~~  232 (262)
                      .+|...+.+.+.       .+.....++|+.+.++-.. .............      ...+.++.++|+++++.+++..
T Consensus       128 ~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         128 KTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNN-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHH-------HCSSEEEEEECSEESSSSC-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHH-------hCCCccccceeEEeCCCcc-cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence            888777666542       2667888999999887422 1111111111100      0113467999999999999966


Q ss_pred             CCCceeceEEeeCCCccc
Q 024839          233 ESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG~~~  250 (262)
                      ..   +| .+++.+|-.+
T Consensus       200 ~~---~g-~~~~~~~~~~  213 (281)
T d1vl0a_         200 KN---YG-TFHCTCKGIC  213 (281)
T ss_dssp             TC---CE-EEECCCBSCE
T ss_pred             cc---cC-ceeEeCCCcc
Confidence            53   35 4565555433

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.45  E-value=1.3e-13  Score=108.39  Aligned_cols=189  Identities=15%  Similarity=0.089  Sum_probs=119.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|++|||||||.||++++++|.++|+  +|+...|+....        ..+   +..+..+..++..      ...+.+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~---~~~~~~d~~~~~~------~~~~~~d   64 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPR---LDNPVGPLAELLP------QLDGSID   64 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTT---EECCBSCHHHHGG------GCCSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------ccc---ccccccchhhhhh------ccccchh
Confidence            48999999999999999999999997  455555543211        112   3444555433322      1234689


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHHHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHGLL  165 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  165 (262)
                      .+|+++|....       ....-.+..++|+.++..+++++.    +.+ ..+++++||..+...  ....|..+|...+
T Consensus        65 ~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~-v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E  130 (212)
T d2a35a1          65 TAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRAL----EMG-ARHYLVVSALGADAK--SSIFYNRVKGELE  130 (212)
T ss_dssp             EEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             eeeeeeeeecc-------ccccccccccchhhhhhhcccccc----ccc-ccccccccccccccc--cccchhHHHHHHh
Confidence            99999886411       111235677888988888887653    334 578999999876543  3567999998877


Q ss_pred             HHHHHHHHHHCCCCc-EEEEEeCCCccCCCCCCCccchH-hHHHhhhcccCCCCCHHHHHHHHHHHcCCCC
Q 024839          166 GLVRSAASELGKHGI-RVNCVSPFGVATPFSAGTINDVE-GFVCKVANLKGIVLKAKHVAEAALFLASDES  234 (262)
Q Consensus       166 ~~~~~la~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (262)
                      ...+       ..+. +...++|+.+.++.......... ...........+++..+|+|+++..++.++.
T Consensus       131 ~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         131 QALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            6543       3344 58889999998875322111000 0000000000123688999999999997664

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.42  E-value=2.2e-12  Score=106.37  Aligned_cols=209  Identities=12%  Similarity=0.023  Sum_probs=123.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhH----HHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELG----NQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      ++||||||+|.||++++++|.++|++|+++.|+....    ......+...++.++++|+.+.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            4599999999999999999999999999998875421    122233334678999999999988877666       67


Q ss_pred             CEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCC-CCccchhhhHH
Q 024839           85 DIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGS-GPHAYTISKHG  163 (262)
Q Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~a  163 (262)
                      +.++++++.....                .|..+...++.++    .+.. ..++++.||........ ....|...+..
T Consensus        77 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~  135 (312)
T d1qyda_          77 DVVISALAGGVLS----------------HHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPDIMEHALQPGSITFI  135 (312)
T ss_dssp             SEEEECCCCSSSS----------------TTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTTSCCCCCSSTTHHHH
T ss_pred             chhhhhhhhcccc----------------cchhhhhHHHHHH----HHhc-CCcEEEEeeccccCCCcccccchhhhhhH
Confidence            8899988753211                1222333333332    2333 45667777654332221 12233344444


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCcc--------chHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIN--------DVEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      .......+..+   .++....++|+.+..+.......        ...............++.++|+|++++.++.++. 
T Consensus       136 ~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~-  211 (312)
T d1qyda_         136 DKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-  211 (312)
T ss_dssp             HHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-
T ss_pred             HHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc-
Confidence            44444433333   57888999999886543221100        0000000001122337799999999999986642 


Q ss_pred             ceeceE-EeeCCCccc
Q 024839          236 YVSGHD-LVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~-i~~dgG~~~  250 (262)
                       ..|+. ..+.++..+
T Consensus       212 -~~~~~~~~~~~~~~~  226 (312)
T d1qyda_         212 -TLNKTMYIRPPMNIL  226 (312)
T ss_dssp             -GSSSEEECCCGGGEE
T ss_pred             -ccCceEEEeCCCcCC
Confidence             23444 455555433

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.39  E-value=1.8e-12  Score=106.27  Aligned_cols=207  Identities=16%  Similarity=0.134  Sum_probs=123.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH-----HHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN-----QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      -|+||||||+|.||++++++|.++|++|++++|+.....     ...+.+....+.++.+|+.+..+..+.++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            367999999999999999999999999999998754321     22233333568899999999988877776       


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhH
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKH  162 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  162 (262)
                      ..+.++++++...                    ..+...+.++..    ... ...+++.||............+...+.
T Consensus        76 ~~~~vi~~~~~~~--------------------~~~~~~~~~a~~----~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~  130 (307)
T d1qyca_          76 NVDVVISTVGSLQ--------------------IESQVNIIKAIK----EVG-TVKRFFPSEFGNDVDNVHAVEPAKSVF  130 (307)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHH----HHC-CCSEEECSCCSSCTTSCCCCTTHHHHH
T ss_pred             hceeeeecccccc--------------------cchhhHHHHHHH----Hhc-cccceeeeccccccccccccccccccc
Confidence            6899999887531                    112222223222    223 456666666544333333333444444


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccc-------hHhHHHhhhcccCCCCCHHHHHHHHHHHcCCCCC
Q 024839          163 GLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTIND-------VEGFVCKVANLKGIVLKAKHVAEAALFLASDESA  235 (262)
Q Consensus       163 a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (262)
                      ...........+   .++....++|+.+.++........       ..............++..+|+|++++.++..+..
T Consensus       131 ~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  207 (307)
T d1qyca_         131 EVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT  207 (307)
T ss_dssp             HHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG
T ss_pred             cccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhh
Confidence            333333333333   478889999998876532221100       0000000111223477999999999999965532


Q ss_pred             ceeceEEeeCCCccc
Q 024839          236 YVSGHDLVVDGGFTA  250 (262)
Q Consensus       236 ~i~G~~i~~dgG~~~  250 (262)
                       .++...++.+|..+
T Consensus       208 -~~~~~~~~~~~~~~  221 (307)
T d1qyca_         208 -LNKTLYLRLPANTL  221 (307)
T ss_dssp             -TTEEEECCCGGGEE
T ss_pred             -cCceeEEeCCCCcc
Confidence             23333444555443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.28  E-value=2.2e-11  Score=102.53  Aligned_cols=204  Identities=13%  Similarity=-0.017  Sum_probs=122.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHH-HHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQV-EETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~~~~d   85 (262)
                      +.|+|+||||+|.||++++++|.++|++|+++.|+....... +......+..+++|+.|..++ +.++       ...|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE-ELQAIPNVTLFQGPLLNNVPLMDTLF-------EGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH-HHHTSTTEEEEESCCTTCHHHHHHHH-------TTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh-hhcccCCCEEEEeeCCCcHHHHHHHh-------cCCc
Confidence            368999999999999999999999999999999986654321 112225688999999986543 3333       3678


Q ss_pred             EEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC--CCCccchhhhHH
Q 024839           86 IMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG--SGPHAYTISKHG  163 (262)
Q Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~sK~a  163 (262)
                      .++.+.....       ..          ++.....++.++.    +.+ ..++++.||.......  .....|..+|..
T Consensus        74 ~~~~~~~~~~-------~~----------~~~~~~~~~~aa~----~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~  131 (350)
T d1xgka_          74 LAFINTTSQA-------GD----------EIAIGKDLADAAK----RAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFT  131 (350)
T ss_dssp             EEEECCCSTT-------SC----------HHHHHHHHHHHHH----HHS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred             eEEeeccccc-------ch----------hhhhhhHHHHHHH----HhC-CCceEEEeeccccccCCcccchhhhhhHHH
Confidence            8877654321       11          1122223333332    333 4567777776544332  233466777776


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCccch-----HhHHHhhhcccC-----CCCC-HHHHHHHHHHHcCC
Q 024839          164 LLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTINDV-----EGFVCKVANLKG-----IVLK-AKHVAEAALFLASD  232 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~-~~~va~~~~~l~~~  232 (262)
                      .+.+.+       ..++....++|+.+............     .........+..     ..++ .+|+++++..++.+
T Consensus       132 ~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~  204 (350)
T d1xgka_         132 VENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  204 (350)
T ss_dssp             HHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhC
Confidence            655443       23678888999887654322211100     000000000110     1233 47999999999865


Q ss_pred             CCCceeceEEeeCCC
Q 024839          233 ESAYVSGHDLVVDGG  247 (262)
Q Consensus       233 ~~~~i~G~~i~~dgG  247 (262)
                      ......|+.+.+.|.
T Consensus       205 ~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         205 GPQKWNGHRIALTFE  219 (350)
T ss_dssp             CHHHHTTCEEEECSE
T ss_pred             ChhhcCCeEEEEeCC
Confidence            544567899988764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.28  E-value=3.8e-12  Score=104.32  Aligned_cols=128  Identities=16%  Similarity=0.133  Sum_probs=91.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      ++|||||+|.||++++++|.++|+.|++ +++...               +..|+.|.+.++++++..     ++|+|||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~---------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih   60 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE---------------FCGDFSNPKGVAETVRKL-----RPDVIVN   60 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS---------------SCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc---------------ccCcCCCHHHHHHHHHHc-----CCCEEEE
Confidence            5999999999999999999999875554 333221               346999999999888765     7999999


Q ss_pred             CCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCccch
Q 024839           90 NAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHAYT  158 (262)
Q Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~  158 (262)
                      +||.....     .+.+.-...+++|+.+...+..+..     .. ..+++++||.....+.           .+...|+
T Consensus        61 ~Aa~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~  129 (298)
T d1n2sa_          61 AAAHTAVD-----KAESEPELAQLLNATSVEAIAKAAN-----ET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (298)
T ss_dssp             CCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHT-----TT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             eccccccc-----ccccCccccccccccccccchhhhh-----cc-ccccccccccccccCCCCCCCccccccCCCchHh
Confidence            99975321     1122345677888888888877643     22 4678888776544322           2345799


Q ss_pred             hhhHHHHHHHH
Q 024839          159 ISKHGLLGLVR  169 (262)
Q Consensus       159 ~sK~a~~~~~~  169 (262)
                      .+|.+.+.+.+
T Consensus       130 ~~k~~~e~~~~  140 (298)
T d1n2sa_         130 KTKLAGEKALQ  140 (298)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhhhhhhHH
Confidence            99988877654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=2.4e-11  Score=99.79  Aligned_cols=211  Identities=16%  Similarity=0.193  Sum_probs=125.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH--HhCCcCEE
Q 024839           11 AIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE--KYGSLDIM   87 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~~d~l   87 (262)
                      ||||||+|.||++++++|+++|+ .|+++++.....+. .....     ...+|..+.+.   ..+....  ....++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~i   72 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNLVD-----LNIADYMDKED---FLIQIMAGEEFGDVEAI   72 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HHHHT-----SCCSEEEEHHH---HHHHHHTTCCCSSCCEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hcccc-----cchhhhccchH---HHHHHhhhhcccchhhh
Confidence            89999999999999999999996 58777643322111 11111     11223333322   2333322  23468899


Q ss_pred             EeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCC-----------CCCcc
Q 024839           88 YSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGG-----------SGPHA  156 (262)
Q Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  156 (262)
                      +|.|+.....    ..   +.....+.|+.+...+..+....    +  -++++.||.....+.           .....
T Consensus        73 ~~~aa~~~~~----~~---~~~~~~~~~~~~~~~~l~~~~~~----~--i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~  139 (307)
T d1eq2a_          73 FHEGACSSTT----EW---DGKYMMDNNYQYSKELLHYCLER----E--IPFLYASSAATYGGRTSDFIESREYEKPLNV  139 (307)
T ss_dssp             EECCSCCCTT----CC---CHHHHHHHTHHHHHHHHHHHHHH----T--CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             hhhccccccc----cc---ccccccccccccccccccccccc----c--ccccccccccccccccccccccccccccccc
Confidence            9998754221    12   23456677777777776654432    2  245555555443321           24568


Q ss_pred             chhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccCCCCCCCc--cc----hHhHHHh---------hhcccCCCCCHHH
Q 024839          157 YTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVATPFSAGTI--ND----VEGFVCK---------VANLKGIVLKAKH  221 (262)
Q Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~----~~~~~~~---------~~~~~~~~~~~~~  221 (262)
                      |+.+|.+.+.+++.++.+   .++.+..++|..+.+|......  ..    .......         .....+.+..++|
T Consensus       140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d  216 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             cccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence            999999999999888766   5889999999999887433211  00    0001110         0111234678899


Q ss_pred             HHHHHHHHcCCCCCceeceEEeeCCCccc
Q 024839          222 VAEAALFLASDESAYVSGHDLVVDGGFTA  250 (262)
Q Consensus       222 va~~~~~l~~~~~~~i~G~~i~~dgG~~~  250 (262)
                      ++.++..++....    ...+++..|...
T Consensus       217 ~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         217 VADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHHHHHhhhcc----ccccccccccch
Confidence            9999998886543    345677666433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.99  E-value=1.4e-14  Score=112.40  Aligned_cols=167  Identities=10%  Similarity=0.042  Sum_probs=88.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC----Cce------------EEEEecCCCHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP----EKA------------SYRHCDVRDEKQVEET   73 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~------------~~~~~D~~~~~~i~~~   73 (262)
                      ++.|+||+|++|+++|++|+++|++|++.+|++++++++.+++..    ...            ............++..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            477888889999999999999999999999999998888777632    111            1122222222222222


Q ss_pred             HHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCC
Q 024839           74 VAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSG  153 (262)
Q Consensus        74 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~  153 (262)
                      ....... ...................              +..+...+.+.....+.... ....+++.|.....+...
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          82 RDLKNIL-REKIVVSPLVPVSRGAKGF--------------TYSSERSAAEIVAEVLESEK-VVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHTHHHH-TTSEEEECCCCEECCTTCC--------------EECCSSCHHHHHHHHHTCSC-EEECCTTCCHHHHHCTTC
T ss_pred             HHhhhhh-ccccccccccccccccccc--------------cccccchhhhhhhhhhhhhc-ccccceeecHHHhcCccc
Confidence            2211111 1111111111111000000              00111111122222232222 223333333333333344


Q ss_pred             CccchhhhHHHHHHHHHHHHHHCCCCcEEEEEeCCCccC
Q 024839          154 PHAYTISKHGLLGLVRSAASELGKHGIRVNCVSPFGVAT  192 (262)
Q Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pG~v~t  192 (262)
                      ...|...+++....++..+.++....+.++.++||.+++
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~  184 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSN  184 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGG
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHH
Confidence            556777777777778877777777788899999998865

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.17  E-value=6.8e-06  Score=61.14  Aligned_cols=74  Identities=19%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      +|+++|.|+ |.+|+.+|+.|+++|++|++++|+.++.+++.+.+..  ......+..+.......+.       ..|.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~--~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQH--STPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTT--EEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccc--cccccccccchhhhHhhhh-------cccee
Confidence            689999986 9999999999999999999999999999888776653  4455566667666655554       56777


Q ss_pred             EeCC
Q 024839           88 YSNA   91 (262)
Q Consensus        88 i~~a   91 (262)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            7654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.13  E-value=1.6e-05  Score=58.40  Aligned_cols=74  Identities=20%  Similarity=0.356  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      +++++++||.|+ |++|..+++.|...|+ ++.++.|+.++.+++.+.++.   .+.  +   .+++.+.+.       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~---~~~--~---~~~~~~~l~-------~   84 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---EAV--R---FDELVDHLA-------R   84 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---EEC--C---GGGHHHHHH-------T
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc---ccc--c---chhHHHHhc-------c
Confidence            578999999997 9999999999999997 599999999998888887752   222  2   223333333       7


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      .|+||++.+..
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            89999998753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=1.1e-05  Score=60.55  Aligned_cols=82  Identities=22%  Similarity=0.329  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHh---hhCC-CceEEEEecCCCHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVS---SIGP-EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .++++|+|+|.|+ ||.|++++..|.+.|. .++++.|+.+..+++..   .++. ........|+.+.+++.....   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            4678999999997 7999999999999997 58899998776654433   2321 234566789999887766555   


Q ss_pred             HHhCCcCEEEeCCcC
Q 024839           79 EKYGSLDIMYSNAGV   93 (262)
Q Consensus        79 ~~~~~~d~li~~ag~   93 (262)
                          ..|++||+...
T Consensus        90 ----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 ----SADILTNGTKV  100 (182)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----ccceeccccCC
Confidence                78999999754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.06  E-value=4.3e-06  Score=62.91  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +|.++||+||++++|.+.+......|++|+.+.++.++.+.+. +++...+    .|..+++..+++.+..  ....+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~v----i~~~~~~~~~~~~~~~--~~~Gvd~  101 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAA----FNYKTVNSLEEALKKA--SPDGYDC  101 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEE----EETTSCSCHHHHHHHH--CTTCEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhh----cccccccHHHHHHHHh--hcCCCce
Confidence            4899999999999999999999999999999999887765443 4442211    2334433333332221  1135999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       102 v~D~vG  107 (182)
T d1v3va2         102 YFDNVG  107 (182)
T ss_dssp             EEESSC
T ss_pred             eEEecC
Confidence            999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.6e-06  Score=60.71  Aligned_cols=77  Identities=18%  Similarity=0.259  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      +|.+|||+||+|++|...+......|++|+.+.+++++.+. .++++...    ..|.++++    +.+++++..+  .+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~-~~~~Ga~~----vi~~~~~~----~~~~i~~~t~~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAHE----VFNHREVN----YIDKIKKYVGEKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE----EEETTSTT----HHHHHHHHHCTTCE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc-ccccCccc----cccccccc----HHHHhhhhhccCCc
Confidence            58899999999999999999888899999998888776544 44555332    23666643    3334444432  59


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (174)
T d1yb5a2          99 DIIIEMLA  106 (174)
T ss_dssp             EEEEESCH
T ss_pred             eEEeeccc
Confidence            99999876

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.92  E-value=2.2e-05  Score=55.62  Aligned_cols=71  Identities=23%  Similarity=0.320  Sum_probs=57.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++|.|+ |.+|+.+++.|.++|++|++++.+++..+++.++.   ...++..|.++++.++++-      ....|.++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~~vi~Gd~~~~~~l~~~~------i~~a~~vv~   71 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAG------IEDADMYIA   71 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTT------TTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hhhhccCcccchhhhhhcC------hhhhhhhcc
Confidence            5889997 99999999999999999999999999888776654   3578899999987776541      125677776


Q ss_pred             C
Q 024839           90 N   90 (262)
Q Consensus        90 ~   90 (262)
                      .
T Consensus        72 ~   72 (132)
T d1lssa_          72 V   72 (132)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.7e-05  Score=59.19  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~~   84 (262)
                      .|+++||+||++++|..++......|++|+.+++++++.+.+. +++..    ...|..+++-.    +++++..  ..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~----~vi~~~~~d~~----~~v~~~t~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAW----QVINYREEDLV----ERLKEITGGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHH----HHHHHHTTTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCe----EEEECCCCCHH----HHHHHHhCCCCe
Confidence            4889999999999999999999999999999999988875544 45432    22466664333    3344433  258


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |+++.+.+.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999998863

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.85  E-value=5.5e-05  Score=55.81  Aligned_cols=82  Identities=16%  Similarity=0.193  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-CcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-SLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~~d   85 (262)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+.+. ++....  .+..|. ..++.....+.+.+..+ .+|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~--~~~~~~-~~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADV--TLVVDP-AKEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSE--EEECCT-TTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcE--EEeccc-cccccchhhhhhhcccccCCc
Confidence            478999997 689999999988889999999999998875544 344221  222232 22334455566666665 599


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      ++|.++|.
T Consensus       101 ~vid~~g~  108 (170)
T d1e3ja2         101 VTIDCSGN  108 (170)
T ss_dssp             EEEECSCC
T ss_pred             eeeecCCC
Confidence            99999874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=1.7e-05  Score=59.41  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~~   84 (262)
                      +|.++||+||+|++|...+..+...|++|+++.+++++.+. .++.+...    ..|-.+++    +.+++++..+  ++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l~~~Ga~~----vi~~~~~~----~~~~v~~~t~~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LSRLGVEY----VGDSRSVD----FADEILELTDGYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHTTCCSE----EEETTCST----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-cccccccc----cccCCccC----HHHHHHHHhCCCCE
Confidence            47899999999999999999888899999999888776544 44454321    23444432    3344555443  59


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+++.+.|
T Consensus        96 d~v~d~~g  103 (183)
T d1pqwa_          96 DVVLNSLA  103 (183)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999887

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=2.7e-05  Score=57.73  Aligned_cols=75  Identities=11%  Similarity=0.095  Sum_probs=56.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+++||.|||.|+ ||.+++++..|.+.|.+|+++.|+.++.+++.+.+.. ..+..+..|  +.            ...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~~------------~~~   78 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--EL------------EGH   78 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--GG------------TTC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--cc------------ccc
Confidence            3568999999995 8999999999999999999999999998888777653 223332222  11            113


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      +.|++||+...
T Consensus        79 ~~dliIN~Tp~   89 (170)
T d1nyta1          79 EFDLIINATSS   89 (170)
T ss_dssp             CCSEEEECCSC
T ss_pred             ccceeeccccc
Confidence            68999999643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.71  E-value=0.00032  Score=50.30  Aligned_cols=110  Identities=12%  Similarity=0.181  Sum_probs=66.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++.|.|+ |.+|..+|..|+.+|  .+|++++++++..+.....+.+     ........|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            668889995 999999999999988  5799999998765544333321     2333444443   11           


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEec
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT  143 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~is  143 (262)
                      ...-|++|..+|....  +  ..+   -.+.+..|    .-+.+...+.+.+...++.++++|
T Consensus        70 ~~~adivvitag~~~~--~--g~~---r~~l~~~N----~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQK--P--GES---RLDLVNKN----LNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEecccccC--C--CCC---HHHHHHHH----HHHHHHHHHHHhhcCCCcEEEEeC
Confidence            1257999999986421  1  222   23334444    344555666666655466777765

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.65  E-value=0.00028  Score=50.78  Aligned_cols=113  Identities=13%  Similarity=0.203  Sum_probs=69.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ..++++.|+|+ |.+|.++|..|+.+|.  ++++++++++..+.....+.+      ....+...|.   ++        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence            45788999996 9999999999999884  699999998775544444422      2233333332   11        


Q ss_pred             HHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           78 IEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        78 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                         ...-|++|..+|....  +  ..++.   +.+..|    .-+.+...+.+.+...++.++++|-
T Consensus        72 ---l~daDvvvitag~~~~--~--~~~R~---dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 ---CRDADLVVICAGANQK--P--GETRL---DLVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             ---TTTCSEEEECCSCCCC--T--TTCSG---GGHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             ---hccceeEEEecccccc--c--Ccchh---HHHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence               1257999999987522  1  22322   222333    3344455555555443677777653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=0.00012  Score=54.04  Aligned_cols=74  Identities=23%  Similarity=0.335  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +|+++||+||+|++|...+..+...|++|+.+.+++++.+.+ ++++...+    .|..+.  .    +++ ....++|+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~----i~~~~~--~----~~~-~~~~g~D~   94 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEA----ATYAEV--P----ERA-KAWGGLDL   94 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEE----EEGGGH--H----HHH-HHTTSEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-ccccccee----eehhhh--h----hhh-hccccccc
Confidence            588999999999999999998888899999999887766544 44543222    233321  1    222 22346999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            999765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.62  E-value=0.00022  Score=52.66  Aligned_cols=75  Identities=11%  Similarity=0.129  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .++++|.++|.| +||.+++++..|.+.+.+|+++.|+.++.+.+.+.++. ..+..+..|-..              ..
T Consensus        14 ~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~   78 (171)
T d1p77a1          14 WLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQ   78 (171)
T ss_dssp             CCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CS
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------cc
Confidence            356899999998 58889999999998888999999999998888877753 344455544221              23


Q ss_pred             CcCEEEeCCcC
Q 024839           83 SLDIMYSNAGV   93 (262)
Q Consensus        83 ~~d~li~~ag~   93 (262)
                      ..|++||+...
T Consensus        79 ~~diiIN~tp~   89 (171)
T d1p77a1          79 TYDLVINATSA   89 (171)
T ss_dssp             CCSEEEECCCC
T ss_pred             ccceeeecccc
Confidence            68999999764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.58  E-value=0.00049  Score=49.18  Aligned_cols=114  Identities=16%  Similarity=0.198  Sum_probs=68.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCCCceE-EEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGPEKAS-YRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      ++.|+||+|.+|.++|..|+.+|.  ++++++.++.+.+.  ..+.+.... ....-+ ...+..+.++       .-|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~~-~~~~~~~~~~-------~aDi   71 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGYL-GPEQLPDCLK-------GCDV   71 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEEE-SGGGHHHHHT-------TCSE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeEE-cCCChHHHhC-------CCCE
Confidence            689999999999999999999884  59999987654433  233332111 112112 2222223222       5899


Q ss_pred             EEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           87 MYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      +|..+|...  .+  ..++.+   .+..|+.    +.+...+.+.+...++.++++|.
T Consensus        72 vVitag~~~--~~--g~sR~~---ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          72 VVIPAGVPR--KP--GMTRDD---LFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             EEECCSCCC--CT--TCCGGG---GHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEECCCcCC--CC--CCCcch---HHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            999999642  22  334433   3455543    34445555555444677777764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=7.7e-05  Score=47.37  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      ++.++||+||++|+|......+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578999999999999999998888999999999888776544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00019  Score=55.46  Aligned_cols=79  Identities=23%  Similarity=0.172  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCH
Q 024839            4 PRLQGKVAIIMGA----------------ASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDE   67 (262)
Q Consensus         4 ~~~~~k~~lItG~----------------s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~   67 (262)
                      .+++|+++|||+|                ||..|.+||+.+..+|++|.++.......       ....+..+  .+.+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-------~p~~~~~~--~~~t~   72 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-------TPPFVKRV--DVMTA   72 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------CCTTEEEE--ECCSH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------cccccccc--eehhh
Confidence            5789999999987                46789999999999999998875543210       00223333  44555


Q ss_pred             HHHHHHHHHHHHHhCCcCEEEeCCcCC
Q 024839           68 KQVEETVAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        68 ~~i~~~~~~~~~~~~~~d~li~~ag~~   94 (262)
                      +++...   +.+.....|++|++|++.
T Consensus        73 ~~m~~~---~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          73 LEMEAA---VNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHH---HHHHGGGCSEEEECCBCC
T ss_pred             HHHHHH---HHhhhccceeEeeeechh
Confidence            555444   334445789999999986

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.53  E-value=5.3e-05  Score=57.05  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=52.9

Q ss_pred             CCCEEEE-ecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH---HhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-
Q 024839            7 QGKVAII-MGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-   81 (262)
Q Consensus         7 ~~k~~lI-tG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-   81 (262)
                      .|.+++| +||+|++|.+.+......|++|+.+.|+.+..++.   .++++...  .+..|-.+..++.+.+.++.... 
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~--vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ--VITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE--EEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE--EEeccccchhHHHHHHHHHHhhcc
Confidence            3555555 79999999999988888899999888776655433   34444322  22222222223344444444433 


Q ss_pred             CCcCEEEeCCc
Q 024839           82 GSLDIMYSNAG   92 (262)
Q Consensus        82 ~~~d~li~~ag   92 (262)
                      +++|+++.+.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            46999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.51  E-value=0.00025  Score=52.77  Aligned_cols=80  Identities=23%  Similarity=0.251  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.++||+|+ |+||...+..+...|+ +|+++++++++.+.+ ++++..  .+  .|..+. +..+..+++.+..+  .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~--~v--i~~~~~-~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGAD--LT--LNRRET-SVEERRKAIMDITHGRG  100 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCS--EE--EETTTS-CHHHHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccce--EE--Eecccc-chHHHHHHHHHhhCCCC
Confidence            5899999997 8999999999988998 799999998887544 455422  12  233322 22333444544443  4


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=0.00015  Score=54.41  Aligned_cols=78  Identities=19%  Similarity=0.240  Sum_probs=53.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeE-EEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFV-IIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +++|||+||+|++|...+......|+.+ +.+++++++..++.++++..    ...|..+++ +.+.++++.  ...+|+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad----~vi~~~~~~-~~~~~~~~~--~~GvDv  103 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD----AAVNYKTGN-VAEQLREAC--PGGVDV  103 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS----EEEETTSSC-HHHHHHHHC--TTCEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce----EEeeccchh-HHHHHHHHh--ccCceE
Confidence            4899999999999999998887789864 45677777777777777643    333444432 222233222  135999


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      ++.+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            999987

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.48  E-value=9.3e-05  Score=52.26  Aligned_cols=72  Identities=18%  Similarity=0.249  Sum_probs=55.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHH-HHHHHHHhCCcCEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEET-VAYAIEKYGSLDIM   87 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~~~~d~l   87 (262)
                      |.++|.|+ |.+|+.++++|.++|++|++++.+++..+++.+.    ....+..|.++++.++++ ++       +.|.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~----~~~~~~gd~~~~~~l~~a~i~-------~a~~v   68 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----ATHAVIANATEENELLSLGIR-------NFEYV   68 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT----CSEEEECCTTCTTHHHHHTGG-------GCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh----CCcceeeecccchhhhccCCc-------cccEE
Confidence            56788875 8999999999999999999999998887765432    345677899998777654 22       56877


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      |....
T Consensus        69 i~~~~   73 (134)
T d2hmva1          69 IVAIG   73 (134)
T ss_dssp             EECCC
T ss_pred             EEEcC
Confidence            76654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.47  E-value=0.00018  Score=52.92  Aligned_cols=78  Identities=14%  Similarity=0.228  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~   83 (262)
                      .+.+++|+|+++++|...+..+...|. .|+++++++++.+.+ ++++..    ...|.++++..++    +++..  +.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-~~~Ga~----~~i~~~~~~~~~~----~~~~~~~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGAD----YVINASMQDPLAE----IRRITESKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCS----EEEETTTSCHHHH----HHHHTTTSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH-HHcCCc----eeeccCCcCHHHH----HHHHhhccc
Confidence            478999999999999999999988885 788888888776544 344422    2234444333333    33333  25


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus        98 ~d~vid~~g~  107 (170)
T d1jvba2          98 VDAVIDLNNS  107 (170)
T ss_dssp             EEEEEESCCC
T ss_pred             chhhhccccc
Confidence            9999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00078  Score=49.42  Aligned_cols=80  Identities=18%  Similarity=0.279  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC-Cc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG-SL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~~   84 (262)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+ ++++..  +++..+-.+..+.   .+.+....+ .+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~--~~~~~~~~~~~~~---~~~~~~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGAD--LVLQISKESPQEI---ARKVEGQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCS--EEEECSSCCHHHH---HHHHHHHHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCc--ccccccccccccc---cccccccCCCCc
Confidence            4789999986 9999999999988998 699999998887654 455422  2333344444443   344444444 69


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.45  E-value=6.3e-05  Score=55.99  Aligned_cols=78  Identities=14%  Similarity=0.198  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||+||+||.|...+......|++|+.+.+++++.+.+ ++++...+.    |-.+.  ..+....+  ..+++|+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~lGa~~vi----~~~~~--~~~~~~~~--~~~gvD~  101 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEVL----AREDV--MAERIRPL--DKQRWAA  101 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEEE----ECC-----------C--CSCCEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhcccceee----ecchh--HHHHHHHh--hccCcCE
Confidence            478999999999999999988888999999999988876544 445533222    22211  11111111  1236999


Q ss_pred             EEeCCcC
Q 024839           87 MYSNAGV   93 (262)
Q Consensus        87 li~~ag~   93 (262)
                      +|.+.|.
T Consensus       102 vid~vgg  108 (176)
T d1xa0a2         102 AVDPVGG  108 (176)
T ss_dssp             EEECSTT
T ss_pred             EEEcCCc
Confidence            9999874

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.36  E-value=0.0005  Score=49.27  Aligned_cols=114  Identities=12%  Similarity=0.087  Sum_probs=67.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      |++.|+|+ |.+|.++|..|+.+|  .+++++++++++.+.....+.+      ........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            67889995 999999999999988  4799999998765544333321      122333223   2222          


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                       ..-|++|..||.......-...++   .+.+..|    ..+.+...+.+.+...++.++++|-
T Consensus        68 -~~adiVVitaG~~~~~~~~~g~~R---~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQDNPTGDR---FAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC----------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             -ccccEEEEeccccccccccCCccH---HHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence             247999999986421111111111   2233334    3455667777766554677777653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.36  E-value=0.0012  Score=47.97  Aligned_cols=114  Identities=14%  Similarity=0.132  Sum_probs=71.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ....+++.|.|+ |.+|.++|..|+.+|.  ++++++++++..+.....+.+      ........|..   ++      
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~~------   86 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---VT------   86 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---GG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---hc------
Confidence            355778999996 9999999999999985  799999987766544433322      12222222322   22      


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                           ..-|++|..||....  +  ..++.   +.+..|    ..+.+...+.+.+...++.++++|-
T Consensus        87 -----~~adiVVitAg~~~~--~--g~tR~---~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 -----ANSKIVVVTAGVRQQ--E--GESRL---NLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             -----TTCSEEEECCSCCCC--T--TCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -----ccccEEEEecCCccc--c--CcchH---HHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                 257999999997522  2  33433   233333    4456666777766554677777764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.35  E-value=0.00063  Score=48.90  Aligned_cols=82  Identities=12%  Similarity=0.061  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +..-|++.|.||.|.+|..+|+.|.+.|++|.+.+|+.....+...  ..........++   ..+...+.++.....+=
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~--~~~~~v~~~~~~---~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL--ANADVVIVSVPI---NLTLETIERLKPYLTEN   80 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH--TTCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh--hhccccccccch---hhheeeeecccccccCC
Confidence            4556789999999999999999999999999999998776544322  223344444343   34555555554433322


Q ss_pred             CEEEeCC
Q 024839           85 DIMYSNA   91 (262)
Q Consensus        85 d~li~~a   91 (262)
                      .+++..+
T Consensus        81 ~iiiD~~   87 (152)
T d2pv7a2          81 MLLADLT   87 (152)
T ss_dssp             SEEEECC
T ss_pred             ceEEEec
Confidence            3444443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.30  E-value=0.00078  Score=47.99  Aligned_cols=110  Identities=17%  Similarity=0.158  Sum_probs=62.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      +++.|+|+ |.+|.++|..|+.++.  ++++++++++..+.....+.+     ........   +.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------V   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------h
Confidence            35667786 9999999999999874  799999998765554445543     12222211   2211           2


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      ..-|++|..||....  +  ..+.   .+.+..|.    .+.+.+.+.+.+...++.++++|-
T Consensus        67 ~~adivvitag~~~~--~--~~~r---~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGANRK--P--GETR---LDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC----------CH---HHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCceEEEecccccC--c--Ccch---hHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            357999999986421  1  2333   34444453    445555666665443677777653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.30  E-value=0.0002  Score=53.06  Aligned_cols=77  Identities=12%  Similarity=0.101  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG--S   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~   83 (262)
                      .|.+|+|.|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++..    ..+|..+++..    +++.+..+  .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~----~~i~~~~~~~~----~~v~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGAT----DILNYKNGHIE----DQVMKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCS----EEECGGGSCHH----HHHHHHTTTSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCcc----ccccccchhHH----HHHHHHhhccC
Confidence            4788999986 8999999998888897 688999988876544 445421    22344443222    33444432  4


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus        97 ~D~vid~~g~  106 (174)
T d1jqba2          97 VDRVIMAGGG  106 (174)
T ss_dssp             EEEEEECSSC
T ss_pred             cceEEEccCC
Confidence            9999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00062  Score=49.84  Aligned_cols=75  Identities=19%  Similarity=0.365  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.+|+|.|+ |++|...+..+...|++++++++++++.+ ..++++..    ...|..+++....       ...++|+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGad----~~i~~~~~~~~~~-------~~~~~D~   96 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGAD----EVVNSRNADEMAA-------HLKSFDF   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCS----EEEETTCHHHHHT-------TTTCEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCCc----EEEECchhhHHHH-------hcCCCce
Confidence            5889999986 89999999888889999999998888764 45566543    2246555543322       1237999


Q ss_pred             EEeCCcCC
Q 024839           87 MYSNAGVA   94 (262)
Q Consensus        87 li~~ag~~   94 (262)
                      +|.++|..
T Consensus        97 vid~~g~~  104 (168)
T d1uufa2          97 ILNTVAAP  104 (168)
T ss_dssp             EEECCSSC
T ss_pred             eeeeeecc
Confidence            99998853

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.28  E-value=0.0005  Score=50.47  Aligned_cols=46  Identities=20%  Similarity=0.311  Sum_probs=40.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++|.|||.|+ ||.+++++..|.+.|. ++.++.|+.++.+.+.+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            6789999985 8999999999999996 69999999998888877665

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00071  Score=48.68  Aligned_cols=75  Identities=13%  Similarity=0.043  Sum_probs=57.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      .++|.|. +.+|..+++.|.++|+.|+++..+++...+..+......+.++..|.++++.++++-=      .+.|.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i------~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI------DRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT------TTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhcc------ccCCEEEE
Confidence            3777775 7999999999999999999999988766655555544578899999999877655421      25677876


Q ss_pred             CC
Q 024839           90 NA   91 (262)
Q Consensus        90 ~a   91 (262)
                      ..
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.16  E-value=0.0021  Score=46.69  Aligned_cols=78  Identities=17%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh------------CCCceEEEEecCCCHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI------------GPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ++.|.| .|.+|.++|+.|.+.|++|++.+|+++..+++.+.-            .+.++.++.+   ..+.++++++++
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            367776 599999999999999999999999988766554321            1123333333   356778888887


Q ss_pred             HHHhCCcCEEEeCC
Q 024839           78 IEKYGSLDIMYSNA   91 (262)
Q Consensus        78 ~~~~~~~d~li~~a   91 (262)
                      .....+=.++++.+
T Consensus        78 ~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          78 IPHLSPTAIVTDVA   91 (165)
T ss_dssp             GGGSCTTCEEEECC
T ss_pred             hhhcccccceeecc
Confidence            65544444555554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00072  Score=48.33  Aligned_cols=112  Identities=21%  Similarity=0.245  Sum_probs=65.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CCeEEEeeCCchhHHHHHhhhCCC--ce-EEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839           10 VAIIMGAASGIGEATAKLFAEH---GAFVIIADIQDELGNQVVSSIGPE--KA-SYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~---g~~V~~~~r~~~~~~~~~~~~~~~--~~-~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.|+|++|.+|.++|..|+.+   ..++++.+..+ ..+.....+.+.  .. ......-.+.+.+    +       .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~----~-------~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL----E-------G   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHH----T-------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcccc----C-------C
Confidence            5889999999999999998654   36899999764 333333333331  11 1111222333222    2       4


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      -|++|..+|...  .+  ..++.++   +..|    ..+.+...+.+.+...++.++++|.
T Consensus        70 aDvvvitaG~~~--k~--g~~R~dl---~~~N----~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          70 ADVVLISAGVRR--KP--GMDRSDL---FNVN----AGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CSEEEECCSCCC--CT--TCCGGGG---HHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCEEEECCCccC--CC--CcchhhH---HHHH----HHHHHHHHHHHHhhCCCcEEEEccC
Confidence            799999999752  22  3344333   4445    3344555555555443677777764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.13  E-value=0.0021  Score=45.64  Aligned_cols=110  Identities=15%  Similarity=0.132  Sum_probs=67.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCc--hhHHHHHhhhC-----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQD--ELGNQVVSSIG-----PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~--~~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      ++.|+|++|.+|.++|..|..++.  ++++.+...  +..+.....+.     ....+....|.   +++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---EDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HHh----------
Confidence            688999999999999999999984  689988643  22222222221     12333333332   221          


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                       ..-|++|..||...  .+  ..++.   +.+..|    .-+.+...+.+.+...++.++++|-
T Consensus        69 -~~aDiVvitaG~~~--~~--g~~R~---dl~~~N----~~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          69 -AGSDVVVITAGIPR--QP--GQTRI---DLAGDN----APIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             -TTCSEEEECCCCCC--CT--TCCHH---HHHHHH----HHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             -hhcCEEEEeccccc--cc--CCchh---hHHHHH----HHHHHHHHHHHHhcCCCceEEEecC
Confidence             25799999998642  22  34543   344444    4566667777777654677777643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0019  Score=46.78  Aligned_cols=114  Identities=15%  Similarity=0.099  Sum_probs=68.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++..++.|+|+ |.+|..+|..|+.+|.  ++++++++.+..+.....+.+      ........|..   ++      
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~---~~------   85 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN---VS------   85 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG---GG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh---hh------
Confidence            355667888895 9999999999999984  799999998766544433321      12222222322   11      


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                           ..-|++|..||....  +  ..++.+   .+..|    ..+.+...+.+.+...++.++++|.
T Consensus        86 -----~~adivvitag~~~~--~--~~~R~d---ll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          86 -----ANSKLVIITAGARMV--S--GQTRLD---LLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -----TTEEEEEECCSCCCC--T--TTCSSC---TTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             -----ccccEEEEecccccC--C--CCCHHH---HHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence                 357999999986422  1  223222   12223    3445555666655444778887764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.12  E-value=0.0025  Score=43.26  Aligned_cols=38  Identities=24%  Similarity=0.421  Sum_probs=33.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      +++||++||.| +|.+|..-++.|.+.|++|++++....
T Consensus         9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            68899999999 466999999999999999998876543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.11  E-value=0.0014  Score=47.67  Aligned_cols=76  Identities=22%  Similarity=0.295  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.+++|.|+ |++|...+..+...|++|+.+++++++.+.. ++++...    ..|..+.+..++    +.+.....|.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga~~----~i~~~~~~~~~~----~~~~~~g~~~   96 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGASL----TVNARQEDPVEA----IQRDIGGAHG   96 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE----EEETTTSCHHHH----HHHHHSSEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hccCccc----cccccchhHHHH----HHHhhcCCcc
Confidence            4889999886 9999999988888899999999998887654 4454321    234454443333    3333445666


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|-+++
T Consensus        97 ~i~~~~  102 (166)
T d1llua2          97 VLVTAV  102 (166)
T ss_dssp             EEECCS
T ss_pred             cccccc
Confidence            555554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.10  E-value=0.00093  Score=49.19  Aligned_cols=77  Identities=18%  Similarity=0.234  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEE-EeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVI-IADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY-GSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   84 (262)
                      .|.+++|.|+ |+||...+..+...|+.++ ++++++++.+. .++++...  +  .|..+++ +   .+++++.. +++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~~--~--i~~~~~~-~---~~~i~~~t~gg~   97 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGATH--V--INSKTQD-P---VAAIKEITDGGV   97 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCSE--E--EETTTSC-H---HHHHHHHTTSCE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCeE--E--EeCCCcC-H---HHHHHHHcCCCC
Confidence            5889999987 8999999988888898755 55666666544 44555322  2  3444432 2   23333333 479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus        98 D~vid~~G~  106 (174)
T d1f8fa2          98 NFALESTGS  106 (174)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEEcCCc
Confidence            999999884

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.05  E-value=0.01  Score=42.11  Aligned_cols=110  Identities=17%  Similarity=0.142  Sum_probs=62.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCch--hHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDE--LGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      ++.|+||+|.+|.++|..|+.+|  .+++++++.+.  +.+.....+.+      ..++....--.+.+.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l---------   72 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII---------   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh---------
Confidence            58999999999999999999998  48999998753  22222222211      1222221111122111         


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEe
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICT  142 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~i  142 (262)
                        ..-|++|..||...    ....++.+   .+..|..    +.+...+.+.+.. ...++.+
T Consensus        73 --~~aDvVVitAG~~~----~~g~sR~d---l~~~Na~----iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          73 --DESDVVIITSGVPR----KEGMSRMD---LAKTNAK----IVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             --TTCSEEEECCSCCC----CTTCCHHH---HHHHHHH----HHHHHHHHHHHHC-CCEEEEC
T ss_pred             --ccceEEEEeccccc----CCCCChhh---hhhhhHH----HHHHHHHHHhccC-CCeEEEE
Confidence              25799999999642    22345543   4444543    3444455554433 3345544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.01  E-value=0.00073  Score=49.91  Aligned_cols=43  Identities=23%  Similarity=0.263  Sum_probs=37.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS   51 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   51 (262)
                      +|++.|.|+ |.+|.++|..|++.|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999996 9999999999999999999999998877765543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.01  E-value=0.013  Score=41.92  Aligned_cols=113  Identities=11%  Similarity=0.023  Sum_probs=63.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---------eEEEeeCCchhHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA---------FVIIADIQDELGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~---------~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .++.|+||+|.+|.+++..|+..+.         +++...+..+..+.....+.+   .....+...-.+.+.       
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA-------   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh-------
Confidence            3799999999999999999988652         122233444444444333322   233333333223222       


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEec
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTT  143 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~is  143 (262)
                          ...-|++|..+|...    ....+++++   +..|    ..+++.+.+.+.+ .+....++.+|
T Consensus        78 ----~~~advViitaG~~~----~pg~~r~dl---~~~N----~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 ----FKDADYALLVGAAPR----KAGMERRDL---LQVN----GKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----TTTCSEEEECCCCCC----CTTCCHHHH---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cccccEEEeecCcCC----CCCCcHHHH---HHHH----HHHHHHHHHHHHHhCCCCcEEEEec
Confidence                236899999999752    234566554   3334    3455555666555 33134555554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.98  E-value=0.0058  Score=43.11  Aligned_cols=108  Identities=19%  Similarity=0.170  Sum_probs=66.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|.|+ |++|.+++..|+.++  .++++.+++++..+.....+.+     ........|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            4677796 899999999999887  4799999998766544333321     233333322   2222           2


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEec
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT  143 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~is  143 (262)
                      .-|++|..+|....    ...+..+   .+..|    .-+.+...+.+.+...++.++++|
T Consensus        67 ~adivvitag~~~~----~g~~r~d---l~~~N----~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQK----PGETRLQ---LLGRN----ARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCC----SSCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccC----CCcchhh---hhccc----cchHHHHHHHHHhcCCCcEEEEeC
Confidence            57999999987422    2345433   33334    335555666666644367777665

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.00045  Score=45.41  Aligned_cols=74  Identities=16%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||+++|.|. +..|.++|+.|.++|++|++.+.+.....  .+.+.. ...+...+. +.+.    ++       .+
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~-~~~~~~~~~-~~~~----~~-------~~   65 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPE-AVERHTGSL-NDEW----LM-------AA   65 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCT-TSCEEESBC-CHHH----HH-------HC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhh-ccceeeccc-chhh----hc-------cC
Confidence            678999999997 67899999999999999999987654221  122221 223333332 2221    12       57


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |.+|...|+.
T Consensus        66 d~vi~SPGi~   75 (93)
T d2jfga1          66 DLIVASPGIA   75 (93)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCCC
Confidence            9999999975

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.97  E-value=0.0016  Score=48.10  Aligned_cols=79  Identities=15%  Similarity=0.284  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH-HHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ-VEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~~   84 (262)
                      .|.+++|+|+ +|+|...+..+...|+ +|+.+++++++++. .++++.. . ++  |..+.+. .+.+.+..  ....+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~-Ak~~GA~-~-~i--n~~~~~~~~~~~~~~~--~g~G~  100 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK-AMAVGAT-E-CI--SPKDSTKPISEVLSEM--TGNNV  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHHTCS-E-EE--CGGGCSSCHHHHHHHH--HTSCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH-HHhcCCc-E-EE--CccccchHHHHHHHHh--ccccc
Confidence            5889999986 8999999999999995 79999999998864 4455432 1 11  2222221 22222211  22369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999875

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.94  E-value=0.0082  Score=43.04  Aligned_cols=119  Identities=15%  Similarity=0.148  Sum_probs=67.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      +.+++.|.|+ |.+|..+|..|+..+ .++++++.+++..+.....+.+     .....+..+ .+.   ++.+      
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~---~~~~------   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSY---EAAL------   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSH---HHHH------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cch---hhhh------
Confidence            4678888997 999999999998888 4799999887665544333321     011111111 221   1111      


Q ss_pred             hCCcCEEEeCCcCCCCCCC-cCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGT-ILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                       ..-|++|..+|.....+. -.+.+..+   .+..|.    -+++...+.+.+...++.++++|.
T Consensus        75 -~~adiVvitag~~~~~g~~~~~~tR~~---l~~~n~----~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 -TGADCVIVTAGLTKVPGKPDSEWSRND---LLPFNS----KIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             -TTCSEEEECCSCSSCTTCCGGGCCGGG---GHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -cCCCeEEEecccccCCCCCCcccchhh---hhhhhH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence             257999999987532221 11234322   233333    344445555555443677777653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.93  E-value=0.008  Score=42.51  Aligned_cols=109  Identities=17%  Similarity=0.155  Sum_probs=65.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC-----CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP-----EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ++.|+|+ |.+|.++|..|+.+|.  ++++.+++++..+.....+.+     ........  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            5777796 9999999999999984  799999998765543333322     12222222  122212           1


Q ss_pred             CcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEec
Q 024839           83 SLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT  143 (262)
Q Consensus        83 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~is  143 (262)
                      .-|++|..||...  .  ...++.+   .+..|.    -+.+...+.+.+...++.++++|
T Consensus        69 daDvVVitaG~~~--~--~g~~R~d---l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQ--K--PGQSRLE---LVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCC--C--TTCCHHH---HHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CCcEEEEeccccc--C--CCCchhh---hhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            4699999999642  1  2455543   444553    34444555555544367777765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.92  E-value=0.00084  Score=49.14  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+.+ ++++.. . ++  |..+..+..      .+..+.+|.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa~-~-~i--~~~~~~~~~------~~~~~~~d~   94 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGAD-H-YI--ATLEEGDWG------EKYFDTFDL   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCS-E-EE--EGGGTSCHH------HHSCSCEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccCCc-E-Ee--eccchHHHH------Hhhhcccce
Confidence            5889999986 8999998888878899999999998877654 455532 1 22  222211111      122347999


Q ss_pred             EEeCCcCC
Q 024839           87 MYSNAGVA   94 (262)
Q Consensus        87 li~~ag~~   94 (262)
                      ++.+.+..
T Consensus        95 vi~~~~~~  102 (168)
T d1piwa2          95 IVVCASSL  102 (168)
T ss_dssp             EEECCSCS
T ss_pred             EEEEecCC
Confidence            99987754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.90  E-value=0.00055  Score=50.25  Aligned_cols=46  Identities=17%  Similarity=0.387  Sum_probs=38.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      .+.+|||+||+||+|...+......|++|+.+.++.++.+.+ ++++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lG   68 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLG   68 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHT
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-Hhhc
Confidence            466899999999999999987777899999999988876554 4444

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.90  E-value=0.0012  Score=48.38  Aligned_cols=79  Identities=22%  Similarity=0.279  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCC-CHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVR-DEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|.++||.|+ +|+|...+..+...|+. |+.+++++++. +..++++...  ++  |.. +.+.+.+..+...  .+.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~--~i--~~~~~~~~~~~~~~~~~--~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATE--CI--NPQDFSKPIQEVLIEMT--DGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSE--EE--CGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcE--EE--eCCchhhHHHHHHHHHc--CCCC
Confidence            5889999998 59999999999889975 55566666654 5556666322  22  222 1222333333221  2369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999874

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00068  Score=49.23  Aligned_cols=71  Identities=10%  Similarity=-0.004  Sum_probs=46.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEe
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYS   89 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~   89 (262)
                      +++|.|+ |.+|..++..|++.|++|.+++|..+..+...................+.+.+           +..|++|.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~D~iii   69 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----------ATSDLLLV   69 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----------HTCSEEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhh-----------cccceEEE
Confidence            5889987 99999999999999999999999877554322111112222222222333222           26899998


Q ss_pred             CCc
Q 024839           90 NAG   92 (262)
Q Consensus        90 ~ag   92 (262)
                      ..-
T Consensus        70 ~vk   72 (167)
T d1ks9a2          70 TLK   72 (167)
T ss_dssp             CSC
T ss_pred             eec
Confidence            865

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.00084  Score=49.72  Aligned_cols=45  Identities=20%  Similarity=0.389  Sum_probs=38.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      +.++||+||+||+|...+......|++|+.+.++.++.+.+ ++++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lG   76 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLG   76 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHT
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhc
Confidence            45899999999999999988888999999999998886544 4554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.85  E-value=0.0039  Score=44.18  Aligned_cols=110  Identities=15%  Similarity=0.155  Sum_probs=64.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      |++.|+|+ |.+|.++|..|+.++ .++++.+..++..+.....+.+      ....+..+  .+.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            57778886 999999999999888 4799999887765544433322      12222222  121111           


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEec
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT  143 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~is  143 (262)
                      ..-|++|-.||....  +  ..+.   .+.+..|.    -+.+...+.+.+...++.++++|
T Consensus        68 ~~advvvitag~~~~--~--~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 ANSDVIVVTSGAPRK--P--GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             TTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             cCCCEEEEeeeccCC--c--Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            247999999996521  1  2232   23334443    46666777776655466666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.82  E-value=0.026  Score=39.58  Aligned_cols=109  Identities=17%  Similarity=0.183  Sum_probs=64.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++.|+|+ |.+|.+++..|+..|  .++++++.+++..+.....+.+      ...++...  .+.+.+           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------
Confidence            4778896 999999999999998  5899999998766544333321      12333322  222221           


Q ss_pred             CCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEec
Q 024839           82 GSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTT  143 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~is  143 (262)
                      ..-|++|..+|....    ...+..   +.+..|.    .+.+...+.+.+...++.++++|
T Consensus        68 ~dadvvvitag~~~~----~g~~r~---~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRK----PGMTRE---DLLMKNA----GIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCC----TTCCHH---HHHHHHH----HHHHHHHHHHHHHCSSCEEEECC
T ss_pred             cCCeEEEEEEecCCC----CCCchH---HHHHHHH----HHHHHHHHHhhccCCCeEEEEec
Confidence            257999999987422    133443   3333343    33444555555434356666664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.80  E-value=0.041  Score=40.08  Aligned_cols=113  Identities=11%  Similarity=-0.003  Sum_probs=63.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC---C----eEEEeeCCch--hHHHHHhhhCC---CceEEEEecCCCHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG---A----FVIIADIQDE--LGNQVVSSIGP---EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g---~----~V~~~~r~~~--~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .+|.||||+|.||.+++..|++..   .    .+.+.+....  .++...-++.+   .....+..- ++.   .+    
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~~----   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---YE----   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HH----
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---hh----
Confidence            369999999999999999998753   1    4555555543  33333333322   122222221 222   12    


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEec
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTT  143 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~is  143 (262)
                         .+...|++|..+|...    -..++++++   +..|    ..+++...+.+.+ .+....|++++
T Consensus        97 ---~~~~aDvVvi~ag~~r----kpg~tR~Dl---l~~N----~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          97 ---VFEDVDWALLIGAKPR----GPGMERAAL---LDIN----GQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ---HTTTCSEEEECCCCCC----CTTCCHHHH---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hccCCceEEEeeccCC----CCCCcHHHH---HHHH----HHHHHHHHHHHHhhCCCCcEEEEec
Confidence               2236899999998742    224666554   4444    3455556666655 33134455553

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.74  E-value=0.0022  Score=47.05  Aligned_cols=79  Identities=22%  Similarity=0.362  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|.+|||.|+ +|+|...+.++...|+ .|+.+++++++.+.. +++... . .  .|..+ ++.+.+..+...  .+.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~Ga~-~-~--i~~~~~~~~~~~~~~~~~--~~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGAT-E-C--VNPQDYKKPIQEVLTEMS--NGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCS-E-E--ECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhCCe-e-E--EecCCchhHHHHHHHHHh--cCCC
Confidence            5889999998 7899999999999985 688888888876544 444321 1 1  22222 122333333221  1469


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999885

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.72  E-value=0.0018  Score=47.41  Aligned_cols=81  Identities=21%  Similarity=0.251  Sum_probs=53.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecC--CCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV--RDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~i~~~~~~~~~~~~   82 (262)
                      +++||.++|.|-|.=+|+-++..|+++|++|..+.+............  .-......|+  ..++.+++...       
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lk~~~~-------   96 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL--KLNKHHVEDLGEYSEDLLKKCSL-------   96 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS--SCCCCEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccce--eeeeeccccccccchhHHhhccc-------
Confidence            789999999999999999999999999999998876533211000000  0011112222  34555555554       


Q ss_pred             CcCEEEeCCcCC
Q 024839           83 SLDIMYSNAGVA   94 (262)
Q Consensus        83 ~~d~li~~ag~~   94 (262)
                      ..|++|..+|..
T Consensus        97 ~aDIvIsavG~p  108 (171)
T d1edza1          97 DSDVVITGVPSE  108 (171)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEEccCCC
Confidence            479999998864

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.70  E-value=0.0024  Score=46.90  Aligned_cols=79  Identities=18%  Similarity=0.262  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH-HHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ-VEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~~   84 (262)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.+++++++++.. ++++...  +  .|.++.+. +.+.....  ..+.+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-~~lGa~~--~--i~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE--C--LNPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE--E--ECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-HHcCCcE--E--EcCCCchhHHHHHHHHh--cCCCC
Confidence            5889999985 8999999999999996 588888988887554 4454321  1  23332221 22222211  12469


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|-++|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.0054  Score=44.32  Aligned_cols=76  Identities=22%  Similarity=0.309  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .|.++||.|+ |++|...+..+...|++|+++++++++.+.+ ++++..    ...|-.+.+.    .+.+.+.....|.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga~----~~~~~~~~~~----~~~~~~~~~~~~~   96 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGAD----LVVNPLKEDA----AKFMKEKVGGVHA   96 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCS----EEECTTTSCH----HHHHHHHHSSEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCcc----eecccccchh----hhhcccccCCCce
Confidence            5789999875 9999999888888899999999998887654 445421    2233333222    2223333345666


Q ss_pred             EEeCCc
Q 024839           87 MYSNAG   92 (262)
Q Consensus        87 li~~ag   92 (262)
                      +|.+++
T Consensus        97 ~v~~~~  102 (168)
T d1rjwa2          97 AVVTAV  102 (168)
T ss_dssp             EEESSC
T ss_pred             EEeecC
Confidence            666654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.58  E-value=0.0054  Score=44.97  Aligned_cols=79  Identities=22%  Similarity=0.313  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCchhHHHHHhhhCCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDELGNQVVSSIGPEKASYRHCDVRD-EKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~   84 (262)
                      .|.+|+|.| .|+||...+..+...|+. |+++++++++. ++.++++...  ++  |..+ ++......+..  ..+.+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga~~--~i--~~~~~~~~~~~~~~~~--~~~G~   99 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGATD--CL--NPRELDKPVQDVITEL--TAGGV   99 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSE--EE--CGGGCSSCHHHHHHHH--HTSCB
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCCCc--cc--CCccchhhhhhhHhhh--hcCCC
Confidence            578999997 599999999999999985 77778887775 4455555322  12  2211 11223333222  23479


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |++|.++|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999984

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.58  E-value=0.0016  Score=48.03  Aligned_cols=46  Identities=30%  Similarity=0.382  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      +++||.|||.| +||.+++++..|.+.| +|.++.|+.++.+++.+.+
T Consensus        15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            57899999998 5789999999998776 8999999999888776655

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.42  E-value=0.012  Score=43.09  Aligned_cols=83  Identities=12%  Similarity=0.109  Sum_probs=61.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-----------------CceEEEEecCCCHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-----------------EKASYRHCDVRDEKQVE   71 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~i~   71 (262)
                      +.+-|.| -|..|.++|+.|++.|++|++.+|++++.+++.+.-..                 .....+...+.+.+.+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            3467777 58999999999999999999999999888776543110                 12344555667778888


Q ss_pred             HHHHHHHHHhCCcCEEEeCCc
Q 024839           72 ETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag   92 (262)
                      .+.+.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888776655567777653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.41  E-value=0.0048  Score=46.12  Aligned_cols=80  Identities=21%  Similarity=0.184  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|.+|||.|+ +++|...+..+...|+ .|+++++++++++.+ ++++.   . +..|-.+.+-.+++.+ +. .-..+|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga---~-~~~~~~~~~~~~~i~~-~t-~g~g~D   96 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF---E-IADLSLDTPLHEQIAA-LL-GEPEVD   96 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC---E-EEETTSSSCHHHHHHH-HH-SSSCEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccc---c-EEEeCCCcCHHHHHHH-Hh-CCCCcE
Confidence            4889999986 8999888887777776 688888888777544 44432   1 2233333322222222 21 113599


Q ss_pred             EEEeCCcCC
Q 024839           86 IMYSNAGVA   94 (262)
Q Consensus        86 ~li~~ag~~   94 (262)
                      ++|.+.|..
T Consensus        97 ~vid~vG~~  105 (195)
T d1kola2          97 CAVDAVGFE  105 (195)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECcccc
Confidence            999998853

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.40  E-value=0.0086  Score=43.13  Aligned_cols=81  Identities=15%  Similarity=0.153  Sum_probs=56.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---------CceEEEEecCCCHHHHHHHH---HHHH
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---------EKASYRHCDVRDEKQVEETV---AYAI   78 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~i~~~~---~~~~   78 (262)
                      +-|.| .|-.|.++|+.|++.|++|++.+|++++.+++.+....         .+..++.+-+.+++.+++++   +.+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            56666 69999999999999999999999998887766543211         13345555667778887776   3344


Q ss_pred             HHhCCcCEEEeCCc
Q 024839           79 EKYGSLDIMYSNAG   92 (262)
Q Consensus        79 ~~~~~~d~li~~ag   92 (262)
                      ....+=+++|...-
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            44444456666543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.003  Score=47.18  Aligned_cols=43  Identities=21%  Similarity=0.362  Sum_probs=37.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.++...+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            78999997 77999999999999999999999988776555443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.39  E-value=0.0048  Score=45.03  Aligned_cols=76  Identities=21%  Similarity=0.355  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKY--GS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~   83 (262)
                      .|.+++|.|+ |++|...+..+...|+ .|+.+++++++.+.+.+ +...  .++  |..+ +.+++..    +..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga~--~~i--~~~~-~~~~~~~----~~~~~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGAD--HVV--DARR-DPVKQVM----ELTRGRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCS--EEE--ETTS-CHHHHHH----HHTTTCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cccc--eee--cCcc-cHHHHHH----HhhCCCC
Confidence            4789999985 9999999988888886 56777888777655443 4322  222  3322 2333333    222  25


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|++|.++|.
T Consensus       101 ~d~vid~~g~  110 (172)
T d1h2ba2         101 VNVAMDFVGS  110 (172)
T ss_dssp             EEEEEESSCC
T ss_pred             ceEEEEecCc
Confidence            9999999984

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.39  E-value=0.0015  Score=49.23  Aligned_cols=44  Identities=32%  Similarity=0.475  Sum_probs=38.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV   49 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~   49 (262)
                      +++||+++|-| .|.+|..+|+.|.+.|+.|++++.+.+......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            68999999998 888999999999999999999998877765543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.37  E-value=0.023  Score=40.32  Aligned_cols=115  Identities=15%  Similarity=0.174  Sum_probs=67.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .++.|.|+ |++|.++|..|...+ .++++++++++..+.....+.+      .+.+....+  +.+++           
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~-----------   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL-----------   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc-----------
Confidence            46788895 999999999888877 4799999988766554444432      122333322  22111           


Q ss_pred             CCcCEEEeCCcCCCCCCCc-CCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           82 GSLDIMYSNAGVAGPVGTI-LDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        82 ~~~d~li~~ag~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                      ..-|++|..+|.....+.. .+.++.   +.+..|.    -+.+.+.+.+++...++.++++|-
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~---~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRD---DLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGG---GGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccchh---HHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            2579999999975322211 112232   2344443    445555666655443667777653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.33  E-value=0.019  Score=40.48  Aligned_cols=109  Identities=17%  Similarity=0.164  Sum_probs=65.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------CceEEEEe-cCCCHHHHHHHHHHHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------EKASYRHC-DVRDEKQVEETVAYAIEK   80 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~-D~~~~~~i~~~~~~~~~~   80 (262)
                      ++.|+|+ |.+|.++|..|+.+|.  ++++++.+++..+.....+.+      ...+.... |.   +++          
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh----------
Confidence            5677885 9999999999999884  699999988765543322221      12222322 32   212          


Q ss_pred             hCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecC
Q 024839           81 YGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTS  144 (262)
Q Consensus        81 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS  144 (262)
                       ..-|++|..+|....    ...+..   +.+..|    ..+.+...+.+.+...++.++++|-
T Consensus        68 -~~adiVvitag~~~~----~g~~r~---~l~~~n----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 -KGSEIIVVTAGLARK----PGMTRL---DLAHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -TTCSEEEECCCCCCC----SSCCHH---HHHHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -ccccEEEEeccccCC----CCCchH---HHHHHh----hHHHHHHHHHHHhhCCCcEEEEecC
Confidence             257999999986422    234443   333333    3455556666666554666666653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.13  E-value=0.049  Score=39.12  Aligned_cols=83  Identities=14%  Similarity=0.039  Sum_probs=54.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCchhHHHHHhhhCC------------CceEEEEecCCCHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQDELGNQVVSSIGP------------EKASYRHCDVRDEKQVEETV   74 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~   74 (262)
                      |+++|.| .|-+|.++|+.|.+.|+  +|+..+++++..+.+.+.-.-            ....++.+- .-++.+.+++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA   79 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence            4688997 59999999999999996  688889998877665543210            011111111 2356788888


Q ss_pred             HHHHHHhCCcCEEEeCCcC
Q 024839           75 AYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        75 ~~~~~~~~~~d~li~~ag~   93 (262)
                      +++.....+=.+++..+..
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8887765544555555543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.11  E-value=0.03  Score=40.14  Aligned_cols=83  Identities=12%  Similarity=0.125  Sum_probs=55.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---------CceEEEEecCCCHHHHHHHHHH---
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---------EKASYRHCDVRDEKQVEETVAY---   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~i~~~~~~---   76 (262)
                      +++-+.| .|-.|.++|++|.+.|++|.+.+|+.++.+.+.+.-..         .....+..-+.+.+.++.++..   
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            3566775 79999999999999999999999998876655433210         2334566666777777777643   


Q ss_pred             HHHHhCCcCEEEeCCc
Q 024839           77 AIEKYGSLDIMYSNAG   92 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag   92 (262)
                      +.....+=+++|...-
T Consensus        81 ~~~~l~~g~iiid~st   96 (162)
T d3cuma2          81 LLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHSCTTCEEEECSC
T ss_pred             ccccCCCCCEEEECCC
Confidence            3333333356665543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.04  E-value=0.013  Score=43.80  Aligned_cols=38  Identities=26%  Similarity=0.411  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+.||++.|.| .|.||+.+|+.|...|.+|+..++...
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            47899999999 899999999999999999999887654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.041  Score=36.85  Aligned_cols=71  Identities=13%  Similarity=0.163  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .+.++.|.| +|-+|+-++....+.|++|++.+.+.+.....   +   --.++..|..|.+.+.++....     ++|+
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---v---a~~~i~~~~~d~~~l~~~~~~~-----~~Dv   77 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---V---AHRSHVINMLDGDALRRVVELE-----KPHY   77 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---G---SSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---c---CCeEEECCCCCHHHHHHHHHhh-----CCce
Confidence            456799999 78999999999999999999998876643321   1   1246788999998888887654     6898


Q ss_pred             EEe
Q 024839           87 MYS   89 (262)
Q Consensus        87 li~   89 (262)
                      +..
T Consensus        78 iT~   80 (111)
T d1kjqa2          78 IVP   80 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            854

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.01  E-value=0.0039  Score=47.83  Aligned_cols=49  Identities=20%  Similarity=0.367  Sum_probs=42.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      .+++||+++|-| .|.+|..+|+.|.+.|+.|+.++.+...+.......+
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            468999999998 8999999999999999999999998887776665543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.93  E-value=0.0042  Score=46.12  Aligned_cols=43  Identities=26%  Similarity=0.304  Sum_probs=36.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            56889997 77999999999999999999999988776654443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.77  E-value=0.025  Score=41.00  Aligned_cols=79  Identities=16%  Similarity=0.317  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHH-HHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQ-VEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~~   84 (262)
                      .|.+++|.|+ +++|...+..+...|. .|+.+++++++++. .++++...  ++  |..+.++ .++..+..  ..+.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~-a~~~GAd~--~i--n~~~~~~~~~~~~~~~--~~~G~   99 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-AKVFGATD--FV--NPNDHSEPISQVLSKM--TNGGV   99 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHTTCCE--EE--CGGGCSSCHHHHHHHH--HTSCB
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHH-HHHcCCcE--EE--cCCCcchhHHHHHHhh--ccCCc
Confidence            5789999985 7788888888888876 57888888877754 44555321  22  3322211 22222211  12369


Q ss_pred             CEEEeCCcC
Q 024839           85 DIMYSNAGV   93 (262)
Q Consensus        85 d~li~~ag~   93 (262)
                      |+++.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999984

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.011  Score=42.73  Aligned_cols=47  Identities=15%  Similarity=0.125  Sum_probs=40.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      .++.||+++|.|-|.=+|+-++..|.++|++|+++.+....+.+..+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            36789999999999999999999999999999998777665554443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.75  E-value=0.019  Score=42.68  Aligned_cols=39  Identities=26%  Similarity=0.297  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      ..++||++.|.| -|.||+.+|+.+...|.+|+..++...
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            357899999997 789999999999999999999887643

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.011  Score=42.89  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=40.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVV   49 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~   49 (262)
                      .++.||.++|.|-|.=+|+-++..|+++|++|.++......+.+..
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            3678999999999999999999999999999999988776665443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.012  Score=42.42  Aligned_cols=39  Identities=33%  Similarity=0.514  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      .+.||+++|.| .+.||+.+|+.+...|++|+++...+-.
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch
Confidence            47899999999 7799999999999999999999988754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.72  E-value=0.0048  Score=43.96  Aligned_cols=36  Identities=14%  Similarity=0.292  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      .++||++||+|| |.+|..-++.|.+.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            478999999997 669999999999999999988644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.71  E-value=0.014  Score=43.66  Aligned_cols=39  Identities=33%  Similarity=0.389  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .++.||++.|.| .|.||+.+|+.|...|.+|+..++...
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            357899999999 789999999999999999999987643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.67  E-value=0.0098  Score=41.05  Aligned_cols=70  Identities=16%  Similarity=0.196  Sum_probs=50.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      |.++|.| .+.+|..+++.|  +|..|+++..+++..+....    ..+.++..|.++++.++++-      ..+-+.+|
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~----~~~~~i~Gd~~~~~~L~~a~------i~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKAN------VRGARAVI   67 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH----TTCEEEESCTTSHHHHHHTT------CTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh----cCccccccccCCHHHHHHhh------hhcCcEEE
Confidence            4577887 588999999999  45678888888777665533    35788999999987776531      12567777


Q ss_pred             eCC
Q 024839           89 SNA   91 (262)
Q Consensus        89 ~~a   91 (262)
                      ...
T Consensus        68 ~~~   70 (129)
T d2fy8a1          68 VNL   70 (129)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.66  E-value=0.14  Score=36.19  Aligned_cols=113  Identities=13%  Similarity=0.140  Sum_probs=60.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------eEEEeeCCch--hHHHHHhhhC---CCceEEEEecCCCHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGA-------FVIIADIQDE--LGNQVVSSIG---PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .+|.|+||+|.+|.+++..|+..+-       .+++.+....  .++.+..++.   ......+..--.+.    +.   
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~---   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE----IA---   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----HH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----cc---
Confidence            4799999999999999999987542       3556655433  2333322221   12222222211121    11   


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHh-CCCCcEEEEec
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVA-NKIRGSIICTT  143 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~~~~ii~is  143 (262)
                          ....|++|-.+|....    ...+++++   +..|    ..+++...+.+.+ .+..+.++.+|
T Consensus        77 ----~~~~dvVVitag~~~~----~g~sr~dl---l~~N----~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          77 ----FKDLDVAILVGSMPRR----DGMERKDL---LKAN----VKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ----TTTCSEEEECCSCCCC----TTCCTTTT---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cCCceEEEEecccCCC----CCCchhHH---HHHh----HHHHHHHHHHHHhhCCCceEEEEec
Confidence                2368999999987522    23344332   3333    3455555655544 34244555554

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.41  E-value=0.084  Score=38.15  Aligned_cols=80  Identities=15%  Similarity=0.129  Sum_probs=53.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCC--------------------ceEEEEecCCCHHHH
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPE--------------------KASYRHCDVRDEKQV   70 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~i   70 (262)
                      +-|.| .|-.|.++|+.|++.|++|.+.+|++++.+++.+.....                    ....+..-+.+...+
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            45555 889999999999999999999999999888776554220                    112233334455555


Q ss_pred             HHHHHHHHHHhCCcCEEEeCC
Q 024839           71 EETVAYAIEKYGSLDIMYSNA   91 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~a   91 (262)
                      +..+..+.....+=++++...
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence            566666655554445666554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.25  E-value=0.037  Score=40.65  Aligned_cols=39  Identities=28%  Similarity=0.382  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      .+.+|++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            57899999998 7999999999999999999999877544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.24  E-value=0.081  Score=38.00  Aligned_cols=78  Identities=24%  Similarity=0.306  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +..+++|.| .+-.|..-++.....|+.|.+.+.+.++++++...... .+.   +-.++.+.+.+.+.       .-|+
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-~~~---~~~~~~~~l~~~~~-------~aDi   98 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-RVE---LLYSNSAEIETAVA-------EADL   98 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-GSE---EEECCHHHHHHHHH-------TCSE
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-cce---eehhhhhhHHHhhc-------cCcE
Confidence            456799998 56789999999999999999999999998877666542 333   33456666665555       6799


Q ss_pred             EEeCCcCCCC
Q 024839           87 MYSNAGVAGP   96 (262)
Q Consensus        87 li~~ag~~~~   96 (262)
                      ||..+-+.+.
T Consensus        99 vI~aalipG~  108 (168)
T d1pjca1          99 LIGAVLVPGR  108 (168)
T ss_dssp             EEECCCCTTS
T ss_pred             EEEeeecCCc
Confidence            9999987653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.075  Score=40.15  Aligned_cols=43  Identities=16%  Similarity=0.153  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI   52 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   52 (262)
                      .+++||..|++.|   ..+..|+++|++|+.++.++..++.+.+..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5789999999987   468889999999999999998887665543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.21  E-value=0.024  Score=39.08  Aligned_cols=73  Identities=15%  Similarity=0.273  Sum_probs=54.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEE-eeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVII-ADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMY   88 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li   88 (262)
                      ++.|.|++|..|+++++.+.+.|++++. .+++...      .+...+   +..|++.++...+.++.+.+.  +.-+|+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~Vi   70 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RAGLVL   70 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------HhccCC---EEEEecCHHHHHHHHHHHHhc--CCCEEE
Confidence            5899999999999999999999998764 3443221      122222   567999999999999988877  556677


Q ss_pred             eCCcC
Q 024839           89 SNAGV   93 (262)
Q Consensus        89 ~~ag~   93 (262)
                      -..|.
T Consensus        71 GTTG~   75 (128)
T d1vm6a3          71 GTTAL   75 (128)
T ss_dssp             CCCSC
T ss_pred             EcCCC
Confidence            66653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.16  E-value=0.067  Score=37.11  Aligned_cols=75  Identities=13%  Similarity=0.204  Sum_probs=51.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEE-eeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-GAFVII-ADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++.|.|++|..|+++++.+.+. +++++. +++... ....... + .+   +..|++.++...+.++.+.+.  ++-+|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~~-~-~D---vvIDFS~p~~~~~~~~~~~~~--~~~~V   72 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTDG-N-TE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   72 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHTT-T-CS---EEEECCCTTTHHHHHHHHHHT--TCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhccc-c-CC---EEEEcccHHHHHHHHHHHHhc--CCCEE
Confidence            5889999999999999988665 566553 444332 2222111 1 11   678999999999999988765  55667


Q ss_pred             EeCCc
Q 024839           88 YSNAG   92 (262)
Q Consensus        88 i~~ag   92 (262)
                      +-..|
T Consensus        73 iGTTG   77 (135)
T d1yl7a1          73 VGTTG   77 (135)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            65554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.15  E-value=0.014  Score=42.91  Aligned_cols=38  Identities=26%  Similarity=0.332  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+.||++.|.| .|.||+.+++.+...|.+|+..+|...
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEec-cccccccceeeeecccccccccccccc
Confidence            47899999999 566999999999999999999988754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.95  E-value=0.052  Score=39.94  Aligned_cols=39  Identities=28%  Similarity=0.368  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      ..+.++++.|.| .|.||+.+|+.+...|.+|+..++...
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            357899999996 899999999999999999999987643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.92  E-value=0.022  Score=43.40  Aligned_cols=34  Identities=26%  Similarity=0.323  Sum_probs=29.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .|+|+|.| +|-.|.+.|.+|+++|++|.++.|..
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45799998 67899999999999999999998864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.77  E-value=0.032  Score=40.67  Aligned_cols=74  Identities=12%  Similarity=0.144  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC---------------CceEEEEecCCCHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP---------------EKASYRHCDVRDEKQVE   71 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~i~   71 (262)
                      .|++||..|++.|   ..+..|+++|++|+.++.+++.++.+.+..+.               ....++..|..+.....
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            5889999999988   37779999999999999999998887776543               23456777776643321


Q ss_pred             HHHHHHHHHhCCcCEEEeCCc
Q 024839           72 ETVAYAIEKYGSLDIMYSNAG   92 (262)
Q Consensus        72 ~~~~~~~~~~~~~d~li~~ag   92 (262)
                      .         ...|.++....
T Consensus        97 ~---------~~~D~i~~~~~  108 (201)
T d1pjza_          97 I---------GHCAAFYDRAA  108 (201)
T ss_dssp             H---------HSEEEEEEESC
T ss_pred             c---------cceeEEEEEee
Confidence            1         25787766544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.76  E-value=0.034  Score=41.35  Aligned_cols=71  Identities=24%  Similarity=0.231  Sum_probs=53.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++.||+||=.|+++|+   ++..++..|+ .|+.++.+++..+.+.+.+.  ++.++.+|+.+.             .++
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~--~~~~~~~D~~~l-------------~~~  107 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCG--GVNFMVADVSEI-------------SGK  107 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGGC-------------CCC
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccc--cccEEEEehhhc-------------CCc
Confidence            5789999999999884   3345666775 59999999888776655443  578899998542             258


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|+||.|.-+
T Consensus       108 fD~Vi~NPPf  117 (197)
T d1ne2a_         108 YDTWIMNPPF  117 (197)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEeCccc
Confidence            9999999653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.73  E-value=0.032  Score=39.52  Aligned_cols=43  Identities=19%  Similarity=0.286  Sum_probs=36.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCchhHHHHHhhhC
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      ++.+.|+ |.+|.++++.|.+.| ++|++.+|++++.+.+.++.+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~   45 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG   45 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc
Confidence            3667775 999999999998887 889999999998888777654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.58  E-value=0.06  Score=39.75  Aligned_cols=39  Identities=26%  Similarity=0.189  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      +++||++.|.| -|.||+.+|+.+...|.+|+..++....
T Consensus        44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          44 KLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             eecccceEEee-cccchHHHHHHHHhhccccccccccccc
Confidence            46799999998 7899999999999999999998876543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.39  E-value=0.036  Score=37.69  Aligned_cols=36  Identities=22%  Similarity=0.255  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+|+++|.| +|.+|.++|..|.+.|.+|.++.+...
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            367888888 789999999999999999999987754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.38  E-value=0.042  Score=37.40  Aligned_cols=35  Identities=31%  Similarity=0.481  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .+|+++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            577888887 68999999999999999999997764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.37  E-value=0.14  Score=34.91  Aligned_cols=77  Identities=17%  Similarity=0.107  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCC----------hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHH
Q 024839            7 QGKVAIIMGAAS----------GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         7 ~~k~~lItG~s~----------giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      .-|++||.|++.          --+...+++|.+.|++++++..+++......+..  ++++   .+.-+.+++.++++.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~a--D~lY---fePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMA--DATY---IEPIHWEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGS--SEEE---CSCCCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhc--ceee---eecCCHHHHHHHHHH
Confidence            468899999753          2367888999999999999999988765432211  2333   344556666666653


Q ss_pred             HHHHhCCcCEEEeCCcC
Q 024839           77 AIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~   93 (262)
                      =     ++|.++-..|.
T Consensus        81 E-----~pd~il~~~GG   92 (127)
T d1a9xa3          81 E-----RPDAVLPTMGG   92 (127)
T ss_dssp             H-----CCSEEECSSSH
T ss_pred             h-----CcCCeEEEeee
Confidence            2     89999887764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.28  E-value=0.25  Score=35.89  Aligned_cols=85  Identities=19%  Similarity=0.197  Sum_probs=55.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHH---------------HHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK---------------QVEE   72 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------------~i~~   72 (262)
                      .-+++|.| .+-.|..-++-....|++|.+.+.+.+.++++.+...    .++..+..+.+               ..++
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~----~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~  103 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG----KFITVDDEAMKTAETAGGYAKEMGEEFRKK  103 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC----EECCC-----------------------CC
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc----ceEEEeccccccccccccchhhcCHHHHHH
Confidence            44788888 4678999999999999999999999998877765433    12222222111               1122


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCC
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPV   97 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~   97 (262)
                      .-+.+.+...+-|++|..+-+.+..
T Consensus       104 ~~~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         104 QAEAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHHHhhhhheeeeecCCcc
Confidence            2334444456789999999876543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.26  E-value=0.26  Score=32.85  Aligned_cols=81  Identities=12%  Similarity=0.093  Sum_probs=55.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHH-HHHHHHHHHHHHhCCcCE
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEK-QVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~~~d~   86 (262)
                      ||++||.--..-+-..+...|.+.|++|+....+....-+..++.   +...+.+|+.-++ +=-++++++++..+.+-+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~---~~dliilD~~mp~~~G~e~~~~ir~~~~~~pv   77 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL---KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKI   77 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc---cCCEEEEecCCCCCCHHHHHHHHHHhCCCCcE
Confidence            789999999999999999999999999886555543333333332   2345666665332 223667778777777777


Q ss_pred             EEeCC
Q 024839           87 MYSNA   91 (262)
Q Consensus        87 li~~a   91 (262)
                      ++..+
T Consensus        78 i~ls~   82 (118)
T d1u0sy_          78 IVCSA   82 (118)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            76653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.19  E-value=0.12  Score=34.63  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=30.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|+++|.| +|.+|.++|..|.+.|.+|.++.|...
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            36788887 789999999999999999999988754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.18  E-value=0.024  Score=41.95  Aligned_cols=41  Identities=20%  Similarity=0.273  Sum_probs=35.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      +++.|.| +|.-|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            5688998 5679999999999999999999999887766544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.16  E-value=0.061  Score=39.55  Aligned_cols=38  Identities=18%  Similarity=0.128  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .++.++++.|.| .|.||+++++.|...|.+|...++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            457899999999 78999999999999999999998764

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.89  E-value=0.19  Score=35.68  Aligned_cols=82  Identities=20%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecC---CCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV---RDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~i~~~~~~~~~~~~~   83 (262)
                      +|+++.|.+.|+|.|--++..+.+.|.++  ..-+++..+++.+.+......--++|+   .+.+.+.++++.+.+. +.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-PN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-TT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-CC
Confidence            68999999999999999999999998655  344555555555555432111223444   4667777777666554 56


Q ss_pred             cCEEEeCC
Q 024839           84 LDIMYSNA   91 (262)
Q Consensus        84 ~d~li~~a   91 (262)
                      +|.++...
T Consensus        79 vd~v~v~~   86 (163)
T d2csua3          79 VDMLIAIC   86 (163)
T ss_dssp             CSEEEEEE
T ss_pred             cCEEEEee
Confidence            88765544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.85  E-value=0.049  Score=36.60  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=31.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|.++|.| +|.||.++|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            47888988 689999999999999999999987754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.77  E-value=0.052  Score=38.40  Aligned_cols=63  Identities=13%  Similarity=0.157  Sum_probs=46.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCEEEeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDIMYSN   90 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~   90 (262)
                      +.|.| .|.+|.++++.|.+.|+++++..|+.++.+++.++.+-. .      ..+   .+++++       .-|+||.+
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~-~------~~~---~~~~~~-------~~dvIila   64 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALP-Y------AMS---HQDLID-------QVDLVILG   64 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCC-B------CSS---HHHHHH-------TCSEEEEC
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccccee-e------ech---hhhhhh-------ccceeeee
Confidence            55665 899999999999999999999999998888877766521 1      122   334444       67999977


Q ss_pred             C
Q 024839           91 A   91 (262)
Q Consensus        91 a   91 (262)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.72  E-value=0.13  Score=38.01  Aligned_cols=74  Identities=24%  Similarity=0.286  Sum_probs=53.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+++|++||=.|+++|.   ++..++..|+ .|+.++.+++.++.+.+.+..  .+..++..|+.+.             
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            35789999999988773   2334456775 799999998877766554432  4677888886442             


Q ss_pred             hCCcCEEEeCCcC
Q 024839           81 YGSLDIMYSNAGV   93 (262)
Q Consensus        81 ~~~~d~li~~ag~   93 (262)
                      .+++|+||.|.-+
T Consensus       107 ~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 NSRVDIVIMNPPF  119 (201)
T ss_dssp             CCCCSEEEECCCC
T ss_pred             CCcCcEEEEcCcc
Confidence            3479999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.69  E-value=0.036  Score=42.94  Aligned_cols=33  Identities=27%  Similarity=0.308  Sum_probs=29.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      +|+|+|+| +|--|...|.+|++.|++|+++.++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            68999998 5678999999999999999998764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.67  E-value=0.057  Score=39.43  Aligned_cols=38  Identities=32%  Similarity=0.305  Sum_probs=33.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      ...|+|+|.| +|-.|.+.|..|+++|++|++..+...-
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            4678999999 6789999999999999999999887543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.052  Score=37.02  Aligned_cols=35  Identities=20%  Similarity=0.225  Sum_probs=30.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|+++|.| +|.||.++|..|++.|.+|.++.|...
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            47899998 457999999999999999999988643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.60  E-value=0.084  Score=40.16  Aligned_cols=72  Identities=15%  Similarity=0.120  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++++|=.|+++|   .++..|+++|++|+.++.+++.++.+.+...  ..++.++..|..+.+.           .+++
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4678999999987   4566788999999999999988876665543  2468899999766321           1368


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |.|+..-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.52  E-value=0.07  Score=38.85  Aligned_cols=33  Identities=24%  Similarity=0.353  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      ++.|.| +|..|.++|..|++.|++|.+.+|..+
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            577888 589999999999999999999988644

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.42  E-value=0.049  Score=41.59  Aligned_cols=74  Identities=9%  Similarity=0.039  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      ...++++|=.|+++|.   ++..|+++|.+|+.++.+++.++.+.+...  ..++.++..|+.+.+           ..+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence            3567899999999886   788899999999999999998776655432  246888888876532           124


Q ss_pred             CcCEEEeCCc
Q 024839           83 SLDIMYSNAG   92 (262)
Q Consensus        83 ~~d~li~~ag   92 (262)
                      ++|+|+...+
T Consensus       101 ~fD~i~~~~~  110 (246)
T d1y8ca_         101 KFDLITCCLD  110 (246)
T ss_dssp             CEEEEEECTT
T ss_pred             cccccceeee
Confidence            7999887543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.40  E-value=0.057  Score=36.59  Aligned_cols=34  Identities=32%  Similarity=0.285  Sum_probs=29.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      +|.++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            46788887 78999999999999999999998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.39  E-value=0.09  Score=35.41  Aligned_cols=35  Identities=26%  Similarity=0.277  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      ..+.++|.| +|-||.++|..|++.|.+|.++.+..
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            357899998 68999999999999999999987664

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.39  E-value=0.041  Score=40.16  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAF-VIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~-V~~~~r~~~   43 (262)
                      .+|+|+|.| +|-.|...|..|+++|++ |.++.+...
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            368899999 689999999999999985 888877643

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.52  Score=36.93  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=24.8

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEeeCCc
Q 024839            9 KVAIIMGAASGIGE-----ATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         9 k~~lItG~s~giG~-----~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |++||++|++| |.     +++++|.++|++|..++...
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            67788776554 54     68899999999998776543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.31  E-value=0.058  Score=36.36  Aligned_cols=34  Identities=18%  Similarity=0.084  Sum_probs=30.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      .|+++|.| +|-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            57888888 68999999999999999999998764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.30  E-value=0.046  Score=39.47  Aligned_cols=118  Identities=14%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-----CCeEEEeeCCchhHHHHHhhhCC------CceEEEEecCCCHHHHHHHHHH
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEH-----GAFVIIADIQDELGNQVVSSIGP------EKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~-----g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ..++.|.||++-....++..+...     +.++++.+.++++++...+.+..      ........  +|.   ++.++ 
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~eal~-   76 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAFT-   76 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHHS-
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhccC-
Confidence            345777787664333344444432     24799999998877643333211      12222222  122   22222 


Q ss_pred             HHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHh----------------hHHHHHHHHHHHHHHhCCCCcEEE
Q 024839           77 AIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNL----------------AGSVMAVKYAARVMVANKIRGSII  140 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv----------------~~~~~l~~~~~~~~~~~~~~~~ii  140 (262)
                            .-|+||+.+|....       .-.+-.+.+..|.                ....-..+.+.+.+.+...++.++
T Consensus        77 ------~AD~Vvitag~~~~-------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li  143 (167)
T d1u8xx1          77 ------DVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWML  143 (167)
T ss_dssp             ------SCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             ------CCCEEEECCCcCCC-------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEE
Confidence                  68999999987421       1112222333221                122344555666666644467777


Q ss_pred             EecC
Q 024839          141 CTTS  144 (262)
Q Consensus       141 ~isS  144 (262)
                      ++|-
T Consensus       144 ~~TN  147 (167)
T d1u8xx1         144 NYSN  147 (167)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            7653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.04  Score=46.05  Aligned_cols=34  Identities=24%  Similarity=0.377  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      ++.+|||.|+ ||||.++++.|+..|. ++.+++..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            4668999996 7799999999999997 68888654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.24  E-value=0.08  Score=35.58  Aligned_cols=36  Identities=14%  Similarity=0.269  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+|.++|.| +|-||.++|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            478898888 789999999999999999999987643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.22  E-value=0.068  Score=36.23  Aligned_cols=35  Identities=23%  Similarity=0.377  Sum_probs=30.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      -|.++|.| +|-||.++|..|++.|.+|.++.+...
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            47888888 689999999999999999999987654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.18  E-value=0.069  Score=35.72  Aligned_cols=35  Identities=17%  Similarity=0.318  Sum_probs=30.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            47788887 789999999999999999999977643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.11  E-value=0.11  Score=36.64  Aligned_cols=37  Identities=22%  Similarity=0.162  Sum_probs=30.1

Q ss_pred             CCCEEEEe-cCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIM-GAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lIt-G~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .++.++|. .+++.||.++|..|+++|.+|.++.+...
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            35555555 46789999999999999999999988753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.10  E-value=0.11  Score=37.02  Aligned_cols=38  Identities=29%  Similarity=0.463  Sum_probs=34.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      +.||+++|.| -+-+|+.+|.+|...|++|+++..++-.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            6799999998 8999999999999999999999888744

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.094  Score=41.33  Aligned_cols=24  Identities=21%  Similarity=0.181  Sum_probs=20.7

Q ss_pred             ChHHHHHHHHHHHcCCeEEEeeCC
Q 024839           18 SGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus        18 ~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      |..|.++|+.+..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            467999999999999999988543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=0.34  Score=36.79  Aligned_cols=35  Identities=26%  Similarity=0.509  Sum_probs=30.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQ   41 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~   41 (262)
                      +++++|+|.| .||+|..++..|+..|- ++++++..
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            5678999999 78899999999999996 68888754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.72  E-value=0.12  Score=38.37  Aligned_cols=73  Identities=12%  Similarity=0.101  Sum_probs=52.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--PEKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      +.+||=.|+++|.   ++..|++.|++|+.++.+++.++.+.+...  ...+..+..|..+...          ....+|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCce
Confidence            4578999999987   667888999999999999888776655432  2456777788766321          013689


Q ss_pred             EEEeCCcC
Q 024839           86 IMYSNAGV   93 (262)
Q Consensus        86 ~li~~ag~   93 (262)
                      +|+.....
T Consensus       105 ~I~~~~~l  112 (226)
T d1ve3a1         105 YVIFIDSI  112 (226)
T ss_dssp             EEEEESCG
T ss_pred             EEEEecch
Confidence            98887544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.65  E-value=0.099  Score=35.98  Aligned_cols=36  Identities=17%  Similarity=0.219  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .+|+++|.| +|-+|.++|..|.+.|.+|.++.+...
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            468899997 789999999999999999999987654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.33  E-value=1.7  Score=34.11  Aligned_cols=79  Identities=11%  Similarity=0.048  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh-----CCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI-----GPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      ++++||=..+.+|.   ++..++..|++|+.++.+...++.+.+..     ...++.++..|+      .++++....+-
T Consensus       132 ~~~rVLdlf~~tG~---~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTGV---ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHHT
T ss_pred             CCCeEEEecCCCcH---HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhcC
Confidence            47788877766652   23345568999999999988776555432     234678888775      34455555555


Q ss_pred             CCcCEEEeCCcCC
Q 024839           82 GSLDIMYSNAGVA   94 (262)
Q Consensus        82 ~~~d~li~~ag~~   94 (262)
                      .++|+||.+.-.+
T Consensus       203 ~~fD~IilDPP~f  215 (309)
T d2igta1         203 STYDIILTDPPKF  215 (309)
T ss_dssp             CCBSEEEECCCSE
T ss_pred             CCCCEEEECCCcc
Confidence            6899999986543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.24  E-value=0.37  Score=33.75  Aligned_cols=79  Identities=11%  Similarity=0.031  Sum_probs=52.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--------CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--------EKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +-+.| -|-.|.++|++|.+.|+.+ ...|+.++..+..+....        .+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            55666 4899999999999988765 467777766655554321        1333444556677777777777665544


Q ss_pred             CcCEEEeCC
Q 024839           83 SLDIMYSNA   91 (262)
Q Consensus        83 ~~d~li~~a   91 (262)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            455555554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.15  E-value=0.09  Score=35.62  Aligned_cols=33  Identities=21%  Similarity=0.173  Sum_probs=28.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~   41 (262)
                      .|.++|.| +|-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            35677887 6899999999999999999998765

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.80  E-value=1.6  Score=34.35  Aligned_cols=80  Identities=15%  Similarity=0.072  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .+|++||=.++.+| |.++  +++..+.+|+.++.+++.++.+.+..   +-.++.++..|..+      +.+...+...
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhc
Confidence            46888888877765 3333  34456778999999988877665443   22467788887543      3334444445


Q ss_pred             CcCEEEeCCcCC
Q 024839           83 SLDIMYSNAGVA   94 (262)
Q Consensus        83 ~~d~li~~ag~~   94 (262)
                      ++|+||.+...+
T Consensus       215 ~fD~Vi~DpP~~  226 (318)
T d1wxxa2         215 RFDLVVLDPPAF  226 (318)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CCCEEEEcCCcc
Confidence            799999997654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.79  E-value=0.13  Score=39.01  Aligned_cols=37  Identities=16%  Similarity=0.153  Sum_probs=31.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      ...++|+|.| +|--|..+|..|+++|++|+++.+..+
T Consensus         2 ~~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3467899999 567899999999999999999987643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.78  E-value=0.14  Score=40.18  Aligned_cols=35  Identities=17%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD   39 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~   39 (262)
                      .+++||+++|-| .|.+|..+|+.|.+.|+.|+.++
T Consensus        32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            468899999999 68999999999999999988765

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.77  E-value=0.15  Score=37.64  Aligned_cols=39  Identities=18%  Similarity=0.172  Sum_probs=33.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      +.|. |.|.+|..+|..|++.|++|++.+.+++..+.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            5666 58999999999999999999999999887665543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.77  E-value=0.95  Score=28.85  Aligned_cols=72  Identities=14%  Similarity=0.184  Sum_probs=46.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCCcCE
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      +.|++-+.|-++---.++|+.|.++|++|...++......+...+.+   +.+...+-  ++.+           ...|.
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~G---i~v~~g~~--~~~i-----------~~~d~   70 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAG---AKIYIGHA--EEHI-----------EGASV   70 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTT---CEEEESCC--GGGG-----------TTCSE
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCC---CeEEECCc--cccC-----------CCCCE
Confidence            46788888855444477899999999999999987554433333333   33333221  1111           25799


Q ss_pred             EEeCCcCC
Q 024839           87 MYSNAGVA   94 (262)
Q Consensus        87 li~~ag~~   94 (262)
                      +|...++.
T Consensus        71 vV~S~AI~   78 (96)
T d1p3da1          71 VVVSSAIK   78 (96)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCcC
Confidence            99998875

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.74  E-value=0.19  Score=34.05  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      ..|.++|.| +|-||.++|..|.+.|.+|.++.+..
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            357899998 68999999999999999999997764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.57  E-value=1  Score=30.89  Aligned_cols=83  Identities=20%  Similarity=0.119  Sum_probs=55.5

Q ss_pred             CCCEEEEecCC---ChHHHHHHHHHHHcCCeEEEeeCCchhHH--HHH---hhhCCCceEEEEecCCCHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAA---SGIGEATAKLFAEHGAFVIIADIQDELGN--QVV---SSIGPEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         7 ~~k~~lItG~s---~giG~~ia~~l~~~g~~V~~~~r~~~~~~--~~~---~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      +.|.+.|.|+|   +..|..+++.|.+.|++|+.+........  ...   .++.. .+..+.. ...++.+.++++++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~-~iD~v~i-~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPD-KIEVVDL-FVKPKLTMEYVEQAI   95 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSS-CCSEEEE-CSCHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCc-cceEEEE-EeCHHHHHHHHHHHH
Confidence            46899999999   57999999999999999998865543221  111   12221 1211111 245777888888887


Q ss_pred             HHhCCcCEEEeCCcC
Q 024839           79 EKYGSLDIMYSNAGV   93 (262)
Q Consensus        79 ~~~~~~d~li~~ag~   93 (262)
                      +.  ++..++...|.
T Consensus        96 ~~--g~k~v~~~~G~  108 (139)
T d2d59a1          96 KK--GAKVVWFQYNT  108 (139)
T ss_dssp             HH--TCSEEEECTTC
T ss_pred             Hh--CCCEEEEeccc
Confidence            76  56778777764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.53  E-value=0.12  Score=35.00  Aligned_cols=35  Identities=23%  Similarity=0.402  Sum_probs=31.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|.++|.| +|-||.++|..|.+.|.+|.++.|...
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            57788888 689999999999999999999988754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.49  E-value=0.12  Score=41.12  Aligned_cols=36  Identities=33%  Similarity=0.434  Sum_probs=30.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      ++|+++|.| +|--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            468999999 567899999999999999999876643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.48  E-value=0.11  Score=38.83  Aligned_cols=78  Identities=14%  Similarity=0.282  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .|.+||-.|+++|--.++.-++......|+.++.+++..+.+.+.+   ...++.++..|..+..          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            4779999999988777766666666678999999988776655544   2356777777755411          11247


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999888753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.47  E-value=0.18  Score=38.00  Aligned_cols=36  Identities=25%  Similarity=0.408  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      -..|+++|.| +|-.|...|.+|+++|++|.++.+..
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            3678999999 56779999999999999999987654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.41  E-value=0.13  Score=40.17  Aligned_cols=37  Identities=24%  Similarity=0.322  Sum_probs=31.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      -+.|+|+|+| +|--|...|.+|+++|++|+++.+...
T Consensus        28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3567899999 557799999999999999999976643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.35  Score=32.46  Aligned_cols=77  Identities=12%  Similarity=0.094  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCC----------hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHH
Q 024839            7 QGKVAIIMGAAS----------GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         7 ~~k~~lItG~s~----------giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      ..|++||.|++.          --+...++.|.++|++++++..+++......+..  +++++   +.-..+.+.++++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~a--D~lYf---eplt~e~v~~Ii~~   77 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTS--DRLYF---EPVTLEDVLEIVRI   77 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSS--SEEEC---CCCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhc--CceEE---ccCCHHHHHHHHHH
Confidence            367899999863          3367888999999999999988888654321111  23333   33455555555542


Q ss_pred             HHHHhCCcCEEEeCCcC
Q 024839           77 AIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~   93 (262)
                         +  ++|.++-..|.
T Consensus        78 ---E--~p~~ii~~~GG   89 (121)
T d1a9xa4          78 ---E--KPKGVIVQYGG   89 (121)
T ss_dssp             ---H--CCSEEECSSST
T ss_pred             ---h--CCCEEEeehhh
Confidence               2  78998887764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.35  E-value=0.14  Score=36.26  Aligned_cols=35  Identities=17%  Similarity=0.284  Sum_probs=29.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEeeCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGA--FVIIADIQD   42 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~--~V~~~~r~~   42 (262)
                      .||+++|.| +|.+|..+|..|.+.+.  +|+++.+.+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            489999999 57889999999999885  678876653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=91.33  E-value=0.15  Score=36.65  Aligned_cols=73  Identities=15%  Similarity=0.187  Sum_probs=40.6

Q ss_pred             CEEEEecCCChHHH--HHHHHHHHc----CCeEEEeeCCchhHHHHHhhhC------CCceEEEEecCCCHHHHHHHHHH
Q 024839            9 KVAIIMGAASGIGE--ATAKLFAEH----GAFVIIADIQDELGNQVVSSIG------PEKASYRHCDVRDEKQVEETVAY   76 (262)
Q Consensus         9 k~~lItG~s~giG~--~ia~~l~~~----g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~   76 (262)
                      -++.|.|| |.+|.  ++...|+..    +.++++++.++++++.....+.      .....+...  +|.   ++.++ 
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~---~eaL~-   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNL---DDVII-   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCH---HHHHT-
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CCh---hhccc-
Confidence            35777786 54554  454445443    4589999999887654332221      122222222  222   22222 


Q ss_pred             HHHHhCCcCEEEeCCcCC
Q 024839           77 AIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        77 ~~~~~~~~d~li~~ag~~   94 (262)
                            ..|++|+.++..
T Consensus        76 ------dad~Vv~~~~~g   87 (171)
T d1obba1          76 ------DADFVINTAMVG   87 (171)
T ss_dssp             ------TCSEEEECCCTT
T ss_pred             ------CCCeEeeecccc
Confidence                  689999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.30  E-value=0.15  Score=35.67  Aligned_cols=37  Identities=11%  Similarity=0.065  Sum_probs=30.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      +-|.| .|.+|.++|+.|.++|++|+..+++++.....
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            55665 69999999999999999999988776655433

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.10  E-value=0.34  Score=38.19  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHH--HHhhh-CCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQ--VVSSI-GPEKASYRHCDVRDEKQVEETVAYAIEKY   81 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~--~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   81 (262)
                      .+||+||-.|+++|+   ++..+++.|+ +|+.++.++.....  ..... ...++.++..|+.+...          ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~~  100 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------PV  100 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------SC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------cc
Confidence            579999999999886   5667788886 68888887654321  11111 22578899988876421          11


Q ss_pred             CCcCEEEeCC
Q 024839           82 GSLDIMYSNA   91 (262)
Q Consensus        82 ~~~d~li~~a   91 (262)
                      .++|+|+...
T Consensus       101 ~~~D~Ivse~  110 (311)
T d2fyta1         101 EKVDVIISEW  110 (311)
T ss_dssp             SCEEEEEECC
T ss_pred             ccceEEEEee
Confidence            3799999864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.10  E-value=0.13  Score=39.60  Aligned_cols=35  Identities=29%  Similarity=0.340  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD   39 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~   39 (262)
                      .+++||+++|-| .|.+|..+++.|.+.|+.|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468899999999 79999999999999999987664

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.94  E-value=0.16  Score=38.87  Aligned_cols=34  Identities=32%  Similarity=0.449  Sum_probs=31.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEee
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIAD   39 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~   39 (262)
                      +++||+++|-| .|..|..+|+.|.+.|+.|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68899999998 89999999999999999988665

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.79  E-value=2.1  Score=31.01  Aligned_cols=142  Identities=16%  Similarity=0.078  Sum_probs=76.6

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAA--SGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s--~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..++++++....  ..+..+++..|...|.+|+.+....+                     .+.+   .+.+ .....+.
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~---------------------~~~~---~l~~-~~~~~~~   77 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR---------------------CGRD---ELAE-RLRSVGE   77 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT---------------------CCHH---HHHH-HHTTSCC
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc---------------------cCHH---HHHH-HhhccCC
Confidence            346666665433  34777888888888888765533221                     1222   2222 2233467


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCCcEEEEecCCCccCCCCCCccchhhhHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMAVKYAARVMVANKIRGSIICTTSTASTVGGSGPHAYTISKHG  163 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  163 (262)
                      ++.||+..+.......  ...  ...    ..+...+.++|++.    +.....++.+++....... .....-....++
T Consensus        78 ~~~vv~l~~~~~~~~~--~~~--~~~----~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~  144 (209)
T d2fr1a2          78 VAGVLSLLAVDEAEPE--EAP--LAL----ASLADTLSLVQAMV----SAELGCPLWTVTESAVATG-PFERVRNAAHGA  144 (209)
T ss_dssp             CSEEEECTTTTCCCCS--SCG--GGC----HHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCSS-TTSCCSCGGGHH
T ss_pred             CCeEEEeCCCCCCCCc--chh--HHH----HHHHHHHHHHHHHH----hCCCCCcEEEEEcCCcccC-CCcccCCHhHHh
Confidence            8888888664321111  111  111    12344455666543    2222456666655433222 222344578999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEE
Q 024839          164 LLGLVRSAASELGKHGIRVNCV  185 (262)
Q Consensus       164 ~~~~~~~la~e~~~~gi~v~~i  185 (262)
                      +.+|+|+++.|+...-++...+
T Consensus       145 l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         145 LWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHHHHHhCCCceEEEEEC
Confidence            9999999999986544444444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=0.27  Score=34.33  Aligned_cols=35  Identities=9%  Similarity=0.040  Sum_probs=26.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC----CeEEEeeCCch
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHG----AFVIIADIQDE   43 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g----~~V~~~~r~~~   43 (262)
                      |++.|.||||-.|+.+.+.|.++.    .+++..+++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999999887653    34665555543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.34  E-value=0.15  Score=39.17  Aligned_cols=31  Identities=23%  Similarity=0.319  Sum_probs=28.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |+|.| +|-.|.++|.+|+++|++|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88887 68899999999999999999998865

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.27  E-value=0.15  Score=38.20  Aligned_cols=76  Identities=17%  Similarity=0.126  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH---HhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV---VSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .|.+||..|+++|--.++.-+|.  |.+|+.+.+.++-.+..   .+.++-.++.++..|..+-.          ...++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            47789999999999999888886  45799898886654433   34445578999999976411          12358


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      +|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.25  E-value=0.33  Score=37.31  Aligned_cols=37  Identities=22%  Similarity=0.272  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCChHHHHH-----HHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEAT-----AKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~i-----a~~l~~~g~~V~~~~r~~~   43 (262)
                      .+++++|+.|.||.|+..     |..|+++|++|.+++-+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            578888888899999876     7899999999999988743

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.90  E-value=0.17  Score=37.50  Aligned_cols=31  Identities=26%  Similarity=0.306  Sum_probs=27.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |+|.| +|--|...|..|+++|++|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78888 78889999999999999999987764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.84  E-value=0.45  Score=36.45  Aligned_cols=71  Identities=17%  Similarity=0.286  Sum_probs=49.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh--CCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI--GPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..|++||=.|+++|+   ++..+++.|++|+.++.++...+.+.+..  +.-++.++..|+.+      .+     ..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cccc
Confidence            468999999999997   33456778999999999998887665543  23355666666421      11     1357


Q ss_pred             cCEEEeC
Q 024839           84 LDIMYSN   90 (262)
Q Consensus        84 ~d~li~~   90 (262)
                      +|+|+.|
T Consensus       185 fD~V~an  191 (254)
T d2nxca1         185 FDLLVAN  191 (254)
T ss_dssp             EEEEEEE
T ss_pred             cchhhhc
Confidence            9999877

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.78  E-value=1.4  Score=29.01  Aligned_cols=79  Identities=14%  Similarity=0.128  Sum_probs=55.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC--CHHHHHHHHHHHHHHhCCcC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR--DEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~~~d   85 (262)
                      ||++||.--...+-..+...|.+.|++|..+....+.++.+.+.    +...+.+|+.  +.+.+ ++++++++....+-
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~----~~dlillD~~mP~~~G~-el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE----RPDLVLLDMKIPGMDGI-EILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH----CCSEEEEESCCTTCCHH-HHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhC----CCCEEEEeccCCCCCHH-HHHHHHHHhCCCCc
Confidence            58899999999999999999999999998776555555444332    2345666655  44333 66777887766666


Q ss_pred             EEEeCC
Q 024839           86 IMYSNA   91 (262)
Q Consensus        86 ~li~~a   91 (262)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            766654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.54  E-value=0.46  Score=35.64  Aligned_cols=75  Identities=17%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|.+||-.|+++|.-.++   |++.+.+|+.+.+.++..+.+.+.+.. .++.++..|..+-.          ...+++|
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~----------~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY----------EEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----------GGGCCEE
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcc----------hhhhhHH
Confidence            477899999999875554   455567899999988777665555443 57888888865410          1135799


Q ss_pred             EEEeCCcCC
Q 024839           86 IMYSNAGVA   94 (262)
Q Consensus        86 ~li~~ag~~   94 (262)
                      .++.+++..
T Consensus       137 ~Iiv~~a~~  145 (224)
T d1vbfa_         137 RVVVWATAP  145 (224)
T ss_dssp             EEEESSBBS
T ss_pred             HHHhhcchh
Confidence            999888753

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=89.44  E-value=2.2  Score=30.55  Aligned_cols=84  Identities=10%  Similarity=0.099  Sum_probs=43.2

Q ss_pred             CCCCEEEEecCCCh-------------HHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHH
Q 024839            6 LQGKVAIIMGAASG-------------IGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         6 ~~~k~~lItG~s~g-------------iG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   72 (262)
                      +.+|++++.|=|.-             -+.-++..|...+.+|+-.+..-.........                    .
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~--------------------~   60 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND--------------------G   60 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS--------------------S
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh--------------------h
Confidence            36899999998843             34455555544556665544443322221110                    0


Q ss_pred             HHHHHHHHhCCcCEEEeCCcCCCCCCCcCCCCHHHHHH
Q 024839           73 TVAYAIEKYGSLDIMYSNAGVAGPVGTILDLDMAQFDR  110 (262)
Q Consensus        73 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~  110 (262)
                      .+..+.....+.|+||...|.. ..........+++.+
T Consensus        61 ~~~~~~~~~~~~D~vvi~~G~N-D~~~~~~~~~~~~~~   97 (208)
T d2o14a2          61 QLEAILKYIKPGDYFMLQLGIN-DTNPKHKESEAEFKE   97 (208)
T ss_dssp             HHHHHHTTCCTTCEEEEECCTG-GGCGGGCCCHHHHHH
T ss_pred             hHHHHHHhcCCCCEEEEEcCCC-cccccccccHHHHHH
Confidence            1223333345679999888875 222222344544443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.94  E-value=1.2  Score=30.83  Aligned_cols=74  Identities=11%  Similarity=0.191  Sum_probs=49.1

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhh---CC-CceEEEEecCCCHHHHHHHHHHHH
Q 024839            5 RLQGKVAIIMGAASG-IGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI---GP-EKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         5 ~~~~k~~lItG~s~g-iG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .++|+.+|=.|+++| +|.    ..+.+|+ +|+.++.+++..+.+.+.+   +. .++.+++.|..+      .+   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            467999887777766 444    3456775 6999999988766554443   22 468888888432      22   2


Q ss_pred             HHhCCcCEEEeCC
Q 024839           79 EKYGSLDIMYSNA   91 (262)
Q Consensus        79 ~~~~~~d~li~~a   91 (262)
                      ....+.|+++.+.
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2235799998875

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.91  E-value=0.12  Score=34.02  Aligned_cols=38  Identities=11%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      +++||+|+|.|++ .-|..+|..|++.+.++++..|+.+
T Consensus        29 ~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            4689999999954 7899999999998888777666543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.73  E-value=0.44  Score=34.84  Aligned_cols=78  Identities=14%  Similarity=0.135  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      .+=+|-|+||...++.+.+ . +..|+.++++++.++...+.+..  .++.++..+.++...+   ++...  .+++|.+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~~~vdgI   99 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--IEKVDGI   99 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--CSCEEEE
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--CCCccee
Confidence            3445788888888888887 3 46899999999988877666543  5789999988875332   22211  2479999


Q ss_pred             EeCCcCC
Q 024839           88 YSNAGVA   94 (262)
Q Consensus        88 i~~ag~~   94 (262)
                      +...|++
T Consensus       100 l~DlGvS  106 (192)
T d1m6ya2         100 LMDLGVS  106 (192)
T ss_dssp             EEECSCC
T ss_pred             eeccchh
Confidence            9999875

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.66  E-value=1.3  Score=30.85  Aligned_cols=45  Identities=16%  Similarity=0.108  Sum_probs=33.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEe--eCCchhHHHHHhhhC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEH--GAFVIIA--DIQDELGNQVVSSIG   53 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~--g~~V~~~--~r~~~~~~~~~~~~~   53 (262)
                      |++.|.|+||.||.....-+.+.  .++|+..  .++-+.+.+...+..
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFS   50 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHh
Confidence            67999999999999999988876  4676554  344555666666655

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.50  E-value=0.27  Score=36.99  Aligned_cols=78  Identities=22%  Similarity=0.166  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC--------CCceEEEEecCCCHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG--------PEKASYRHCDVRDEKQVEETVAYAI   78 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~   78 (262)
                      .|.+||-.|+++|.-.++.-++.....+|+.+++.++..+.+.+.+.        ..++.++..|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            47799999999999988888888878899999999887665544432        245677777764311          


Q ss_pred             HHhCCcCEEEeCCcCC
Q 024839           79 EKYGSLDIMYSNAGVA   94 (262)
Q Consensus        79 ~~~~~~d~li~~ag~~   94 (262)
                      ...+++|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124799999988754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.39  E-value=0.17  Score=37.75  Aligned_cols=77  Identities=13%  Similarity=0.198  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCcC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSLD   85 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   85 (262)
                      .|.+||=.|+++|.-......+...| +|+.++.+++.++.+.+.... .++.++..|..+++.....+       ..+|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~-------~~vd  127 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-------EKVD  127 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-------CCEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccccccc-------ceEE
Confidence            37899999999886444333344444 899999999888776655532 57888888988865543322       2567


Q ss_pred             EEEeCC
Q 024839           86 IMYSNA   91 (262)
Q Consensus        86 ~li~~a   91 (262)
                      ++++..
T Consensus       128 ~v~~~~  133 (209)
T d1nt2a_         128 LIYQDI  133 (209)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            776653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.23  E-value=0.91  Score=28.54  Aligned_cols=67  Identities=18%  Similarity=0.175  Sum_probs=44.5

Q ss_pred             EEEEecCCChHH-HHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEE-ecCCCHHHHHHHHHHHHHHhCCcCEE
Q 024839           10 VAIIMGAASGIG-EATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRH-CDVRDEKQVEETVAYAIEKYGSLDIM   87 (262)
Q Consensus        10 ~~lItG~s~giG-~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~~~~d~l   87 (262)
                      ++-+.|- +|+| .++|+.|.++|+.|...++......+.++..+   +.+.. -|..+   +           ...|.|
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G---i~i~~gh~~~~---i-----------~~~d~v   64 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG---IPIFVPHSADN---W-----------YDPDLV   64 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT---CCEESSCCTTS---C-----------CCCSEE
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC---CeEEeeecccc---c-----------CCCCEE
Confidence            4666664 4555 48899999999999999988755444444444   32222 23222   1           358999


Q ss_pred             EeCCcCC
Q 024839           88 YSNAGVA   94 (262)
Q Consensus        88 i~~ag~~   94 (262)
                      |...++.
T Consensus        65 V~SsAI~   71 (89)
T d1j6ua1          65 IKTPAVR   71 (89)
T ss_dssp             EECTTCC
T ss_pred             EEecCcC
Confidence            9999875

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.18  E-value=0.68  Score=38.85  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=50.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHH---HHHhhhCCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGN---QVVSSIGPEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      +.||++.|.|+. ....++++.|.+.|.+|+.++.......   ...+.+...   .+..|-.|..++.+.+++.     
T Consensus       343 l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~---~~i~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         343 LEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDS---TLLYDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTT---CEEEESCBHHHHHHHHHHH-----
T ss_pred             hcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCC---cEEecCCCHHHHHHHHHhc-----
Confidence            579999998864 5778999999889999887764433222   222223221   2334555677777777655     


Q ss_pred             CcCEEEeC
Q 024839           83 SLDIMYSN   90 (262)
Q Consensus        83 ~~d~li~~   90 (262)
                      ++|+++-+
T Consensus       414 ~pDL~ig~  421 (477)
T d1m1na_         414 KPDLIGSG  421 (477)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEC
Confidence            79999855

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.12  E-value=0.48  Score=34.09  Aligned_cols=34  Identities=24%  Similarity=0.210  Sum_probs=26.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEeeCCch
Q 024839           10 VAIIMGAASGIGEATAKLFAEHG-AFVIIADIQDE   43 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g-~~V~~~~r~~~   43 (262)
                      +|.|.||||-.|..+.+.|.++- .++..+..+..
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~   37 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTY   37 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTT
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecccc
Confidence            58999999999999999998865 45554444433

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.97  E-value=0.74  Score=33.07  Aligned_cols=73  Identities=19%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---C-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---G-PEKASYRHCDVRDEKQVEETVAYAIEKYG   82 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   82 (262)
                      .|.++|=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+   + ..++.++++|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            4778888888887   334556677889999999998877665544   2 1478888887421          112235


Q ss_pred             CcCEEEeCCc
Q 024839           83 SLDIMYSNAG   92 (262)
Q Consensus        83 ~~d~li~~ag   92 (262)
                      .+|.++.+..
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999987754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=87.96  E-value=4.9  Score=31.36  Aligned_cols=78  Identities=15%  Similarity=0.096  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhh-----CCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASG-IGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI-----GPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~g-iG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +|++||=..+.+| ++.    .++..|+ .|+.++.+...++...+.+     ...++.+++.|+.      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5888887666654 433    3445676 5999999987766554433     2256888998863      44455555


Q ss_pred             HhCCcCEEEeCCcCC
Q 024839           80 KYGSLDIMYSNAGVA   94 (262)
Q Consensus        80 ~~~~~d~li~~ag~~   94 (262)
                      +..++|+||.+.-.+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            556899999997543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.85  E-value=0.28  Score=37.64  Aligned_cols=31  Identities=29%  Similarity=0.511  Sum_probs=27.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |+|.| +|-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            77887 67889999999999999999998754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.67  E-value=2  Score=33.82  Aligned_cols=78  Identities=15%  Similarity=0.055  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhh--CC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASG-IGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI--GP--EKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         7 ~~k~~lItG~s~g-iG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~--~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .|++||=.++..| ++.+    ++..|+ +|+.++.+++.++.+.+.+  +.  .++.++..|+.      +........
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            4788888877644 3433    345665 6999999988877655443  11  36677777753      333444444


Q ss_pred             hCCcCEEEeCCcCC
Q 024839           81 YGSLDIMYSNAGVA   94 (262)
Q Consensus        81 ~~~~d~li~~ag~~   94 (262)
                      ..++|+||.+.-..
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            46899999997654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.43  E-value=0.8  Score=33.13  Aligned_cols=73  Identities=15%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GPEKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      .+.+||=.|++.|.   .+..|+++|++|+.++.+++.++.+.+..   +-..+.+...|+.+..-           .+.
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~   95 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DGE   95 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CCC
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------ccc
Confidence            45689999997554   55688899999999999988877554333   22456777778765321           136


Q ss_pred             cCEEEeCCcC
Q 024839           84 LDIMYSNAGV   93 (262)
Q Consensus        84 ~d~li~~ag~   93 (262)
                      +|+|+.+.-.
T Consensus        96 fD~I~~~~~~  105 (198)
T d2i6ga1          96 YDFILSTVVM  105 (198)
T ss_dssp             EEEEEEESCG
T ss_pred             ccEEEEeeee
Confidence            8999876644

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.17  E-value=0.29  Score=34.85  Aligned_cols=31  Identities=19%  Similarity=0.074  Sum_probs=25.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEe
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIA   38 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~   38 (262)
                      +++.|+|.| +|.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEE
Confidence            367888888 7899999999999999875443

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.07  E-value=1.6  Score=28.93  Aligned_cols=78  Identities=12%  Similarity=0.081  Sum_probs=55.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCC--HHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRD--EKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .++||.--...+...+...|.+.|++|..+....+..+.+    .......+.+|+.-  .+. -++++++++....+-+
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l----~~~~~dlii~D~~mp~~~G-~el~~~l~~~~~~~pi   78 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL----ASKTPDVLLSDIRMPGMDG-LALLKQIKQRHPMLPV   78 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHH----TTCCCSEEEECCSSSSSTT-HHHHHHHHHHSSSCCE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHH----HhCCCCEEEehhhcCCchH-HHHHHHHHHhCCCCeE
Confidence            4799999999999999999999999998776555444333    33445677777653  233 3567778777666666


Q ss_pred             EEeCC
Q 024839           87 MYSNA   91 (262)
Q Consensus        87 li~~a   91 (262)
                      ++..+
T Consensus        79 I~~t~   83 (123)
T d1krwa_          79 IIMTA   83 (123)
T ss_dssp             EESCC
T ss_pred             EEEec
Confidence            66554

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.05  E-value=0.19  Score=36.95  Aligned_cols=31  Identities=13%  Similarity=0.111  Sum_probs=26.8

Q ss_pred             CEEEEecCCChHHHH-----HHHHHHHcCCeEEEee
Q 024839            9 KVAIIMGAASGIGEA-----TAKLFAEHGAFVIIAD   39 (262)
Q Consensus         9 k~~lItG~s~giG~~-----ia~~l~~~g~~V~~~~   39 (262)
                      |++.|||-++|.|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999988898874     6778999999999875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.02  E-value=0.43  Score=33.88  Aligned_cols=81  Identities=10%  Similarity=0.104  Sum_probs=51.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEE-EeeCCchh-HHHHHhh--------------hCC--CceEEEEecCCCHHHH
Q 024839           10 VAIIMGAASGIGEATAKLFAEH-GAFVI-IADIQDEL-GNQVVSS--------------IGP--EKASYRHCDVRDEKQV   70 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~-g~~V~-~~~r~~~~-~~~~~~~--------------~~~--~~~~~~~~D~~~~~~i   70 (262)
                      ++.|.|++|..|+++++...+. +.+++ .++|.... ......+              +..  ... -+..|++.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHHH
Confidence            5999999999999999999876 45543 33333211 0000000              000  111 255899999999


Q ss_pred             HHHHHHHHHHhCCcCEEEeCCcC
Q 024839           71 EETVAYAIEKYGSLDIMYSNAGV   93 (262)
Q Consensus        71 ~~~~~~~~~~~~~~d~li~~ag~   93 (262)
                      .+.++...+.  ++.+|+-..|.
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999877665  67777766663

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.97  E-value=2.3  Score=28.52  Aligned_cols=91  Identities=20%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             CCCCCCCCCEEEEecCC---ChHHHHHHHHHHHcC-CeEEEeeCCchhHH--HHHhhhCC--CceEEEEecCCCHHHHHH
Q 024839            1 MSKPRLQGKVAIIMGAA---SGIGEATAKLFAEHG-AFVIIADIQDELGN--QVVSSIGP--EKASYRHCDVRDEKQVEE   72 (262)
Q Consensus         1 ~~~~~~~~k~~lItG~s---~giG~~ia~~l~~~g-~~V~~~~r~~~~~~--~~~~~~~~--~~~~~~~~D~~~~~~i~~   72 (262)
                      |++.=++-|++.|.|+|   +..|..+.+.|.+.| ++|+.+-...+...  .....+.+  ..+..... ....+.+.+
T Consensus         1 ~L~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~   79 (129)
T d2csua1           1 MLDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKD   79 (129)
T ss_dssp             CCCTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHH
T ss_pred             ChhHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHH
Confidence            34444678999999999   889999999987665 68988866544321  22222222  11211111 135777888


Q ss_pred             HHHHHHHHhCCcC-EEEeCCcCC
Q 024839           73 TVAYAIEKYGSLD-IMYSNAGVA   94 (262)
Q Consensus        73 ~~~~~~~~~~~~d-~li~~ag~~   94 (262)
                      +++++.+.  ++. +++..+|+.
T Consensus        80 ~~~~~~~~--g~~~~vi~s~Gf~  100 (129)
T d2csua1          80 TLIQCGEK--GVKGVVIITAGFG  100 (129)
T ss_dssp             HHHHHHHH--TCCEEEECCCSST
T ss_pred             HHHHHHHc--CCCEEEEeccccc
Confidence            88888776  445 455555543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.78  E-value=0.34  Score=37.61  Aligned_cols=32  Identities=22%  Similarity=0.291  Sum_probs=27.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCc
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGA-FVIIADIQD   42 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~   42 (262)
                      .|+|.| +|-+|.++|.+|+++|+ +|+++.+..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            488888 56899999999999996 699998763

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=86.46  E-value=1.1  Score=34.60  Aligned_cols=74  Identities=23%  Similarity=0.310  Sum_probs=48.0

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhh---CC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024839            9 KVAIIMGAASG-IGEATAKLFAEHGAFVIIADIQDELGNQVVSSI---GP-EKASYRHCDVRDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         9 k~~lItG~s~g-iG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   83 (262)
                      ++++-.|+++| |+.+++ .  ...++|+.++.+++.++.+.+..   +- .++.+...|+.+.         .....++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45665555555 555544 2  35678999999988876554443   21 4567778887653         2223468


Q ss_pred             cCEEEeCCcCC
Q 024839           84 LDIMYSNAGVA   94 (262)
Q Consensus        84 ~d~li~~ag~~   94 (262)
                      +|++|.|.-+.
T Consensus       180 fDlIVsNPPYI  190 (271)
T d1nv8a_         180 IEMILSNPPYV  190 (271)
T ss_dssp             CCEEEECCCCB
T ss_pred             ccEEEEccccc
Confidence            99999998765

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.31  E-value=0.36  Score=37.17  Aligned_cols=33  Identities=24%  Similarity=0.272  Sum_probs=29.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      .|+|.||+ -.|..+|..|++.|.+|.++.+..+
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            38888865 8999999999999999999988764

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=85.79  E-value=0.46  Score=30.49  Aligned_cols=81  Identities=17%  Similarity=0.117  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCC-------hHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCCCHHHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAAS-------GIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVRDEKQVEETVAYAIE   79 (262)
Q Consensus         7 ~~k~~lItG~s~-------giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   79 (262)
                      +.|.+++.||.|       --|+++.+.|.+.|++|+.++.........                               
T Consensus         2 ~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~~~~~~-------------------------------   50 (96)
T d1iowa1           2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQL-------------------------------   50 (96)
T ss_dssp             CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCGGGT-------------------------------
T ss_pred             CceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCccccchhh-------------------------------
Confidence            458899999987       348899999999999998887654322111                               


Q ss_pred             HhCCcCEEEeCCcCCCCCCCcCCCCHHHHHHHHHHHhhHHHHH
Q 024839           80 KYGSLDIMYSNAGVAGPVGTILDLDMAQFDRTIATNLAGSVMA  122 (262)
Q Consensus        80 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l  122 (262)
                      ...++|++++..-..    +=++=..+.+.+++.+-+.|+-.+
T Consensus        51 ~~~~~d~vF~~lHG~----~GEdG~iQ~~le~l~IPytGs~~~   89 (96)
T d1iowa1          51 KSMGFQKVFIALHGR----GGEDGTLQGMLELMGLPYTGSGVM   89 (96)
T ss_dssp             TTTTEEEEEECCCST----TTSSSHHHHHHHHHTCCBSSCCHH
T ss_pred             hccCceeEEEeccCc----chhccHHHHHHHHcCCCccCCCHH
Confidence            012578888765221    112345666777777766654333

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.69  E-value=0.67  Score=30.77  Aligned_cols=34  Identities=18%  Similarity=0.203  Sum_probs=29.5

Q ss_pred             CEEEEecCC---ChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839            9 KVAIIMGAA---SGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus         9 k~~lItG~s---~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |++.|.|+|   +..|..+.+.|.+.||+|+.+..+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~   38 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY   38 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc
Confidence            789999999   5689999999999999998886543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.45  E-value=0.33  Score=36.06  Aligned_cols=34  Identities=21%  Similarity=0.420  Sum_probs=29.2

Q ss_pred             CCEEEEecCCChHHHH-----HHHHHHHcCCeEEEeeCC
Q 024839            8 GKVAIIMGAASGIGEA-----TAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         8 ~k~~lItG~s~giG~~-----ia~~l~~~g~~V~~~~r~   41 (262)
                      +|++.|+|+.||.|+.     +|..|++.|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999874     677889999999999754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.06  E-value=0.36  Score=36.75  Aligned_cols=32  Identities=16%  Similarity=0.219  Sum_probs=27.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      +|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4889985 7789999999999999999987653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.65  E-value=0.77  Score=34.74  Aligned_cols=34  Identities=32%  Similarity=0.445  Sum_probs=28.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEee
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEH-GAFVIIAD   39 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~-g~~V~~~~   39 (262)
                      +++||+++|-| .|.+|..+|+.|.++ |+.|+.++
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecc
Confidence            47899999999 578999999999865 88877654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.63  E-value=4.9  Score=28.13  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=23.5

Q ss_pred             EEEEecC-CChHHHHHHHHHHHcC----CeEEEeeCCchh
Q 024839           10 VAIIMGA-ASGIGEATAKLFAEHG----AFVIIADIQDEL   44 (262)
Q Consensus        10 ~~lItG~-s~giG~~ia~~l~~~g----~~V~~~~r~~~~   44 (262)
                      ++.|.|| +.+.+..++..+....    .++++.+.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4667775 5577777766665532    489999988653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.57  E-value=1.6  Score=31.90  Aligned_cols=74  Identities=14%  Similarity=0.157  Sum_probs=53.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhh---hCCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSS---IGPEKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +++||=.|++.|+-   +..|++.|++|+.++.+++.++.+.+.   .+..++.++..|..+.+ +         ..+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------ccccc
Confidence            67899999998854   456778899999999998876655433   34467889999887632 1         11468


Q ss_pred             CEEEeCCcCC
Q 024839           85 DIMYSNAGVA   94 (262)
Q Consensus        85 d~li~~ag~~   94 (262)
                      |+|+.+....
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            9998887654

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.57  E-value=3.2  Score=32.41  Aligned_cols=32  Identities=22%  Similarity=0.003  Sum_probs=22.8

Q ss_pred             CEEEEecCCC-hH--HHHHHHHHHHcCCeEEEeeC
Q 024839            9 KVAIIMGAAS-GI--GEATAKLFAEHGAFVIIADI   40 (262)
Q Consensus         9 k~~lItG~s~-gi--G~~ia~~l~~~g~~V~~~~r   40 (262)
                      |+++.++||+ .|  -.++|++|.++|++|++++.
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            3444466653 33  56799999999999988763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.40  E-value=0.73  Score=35.56  Aligned_cols=33  Identities=24%  Similarity=0.316  Sum_probs=27.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeC
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADI   40 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r   40 (262)
                      +.++|+|.| +|--|...|..|+++|++|.++-.
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeC
Confidence            455689998 566799999999999999988743

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.34  E-value=0.53  Score=31.14  Aligned_cols=34  Identities=15%  Similarity=0.147  Sum_probs=26.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc---CCeEEEeeCCc
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEH---GAFVIIADIQD   42 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~---g~~V~~~~r~~   42 (262)
                      .|.++|.|| |.+|.++|..|.+.   |.+|.++.+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            578999985 99999999777654   45798887753

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.29  E-value=0.92  Score=33.96  Aligned_cols=78  Identities=13%  Similarity=0.218  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCChHHH-HHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGE-ATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~-~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      .|.+||=.|+++|--. ++++ +...+..|+.++.+++.++.+.+.... ..+..+..|..+++......       ..+
T Consensus        73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~-------~~v  144 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALV-------PKV  144 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTC-------CCE
T ss_pred             CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccc-------cce
Confidence            4889999999877644 4444 444456899999999998888777654 46778888988876553222       367


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |++++...
T Consensus       145 D~i~~d~~  152 (227)
T d1g8aa_         145 DVIFEDVA  152 (227)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEEcc
Confidence            88877643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.07  E-value=1.5  Score=34.25  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=48.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHHhhh----CCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVVSSI----GPEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+||+||-.|+++|+   ++..+++.|+ +|+.++.++. ...+.+..    ...++.++..|..+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            368999999999986   5667778885 5888887653 22222221    12578899988876421          1


Q ss_pred             hCCcCEEEeCCc
Q 024839           81 YGSLDIMYSNAG   92 (262)
Q Consensus        81 ~~~~d~li~~ag   92 (262)
                      ..++|+++....
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            237899987643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.98  E-value=1.9  Score=29.88  Aligned_cols=46  Identities=17%  Similarity=0.204  Sum_probs=33.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCeEEEe--eCCchhHHHHHhhhC
Q 024839            8 GKVAIIMGAASGIGEATAKLFAEH--GAFVIIA--DIQDELGNQVVSSIG   53 (262)
Q Consensus         8 ~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~--~r~~~~~~~~~~~~~   53 (262)
                      .|++.|.|+||.||.....-+.+.  .++|+..  .++-+.+.+...+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~   51 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN   51 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence            489999999999999999998775  4777654  344455555555555

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.93  E-value=0.73  Score=33.38  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=31.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHh
Q 024839           10 VAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVS   50 (262)
Q Consensus        10 ~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   50 (262)
                      ++.|.| .|.+|..+|..|+ +|++|+.++.+++..+.+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhh
Confidence            366666 8999999998775 79999999999887766543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.47  E-value=0.86  Score=34.33  Aligned_cols=35  Identities=17%  Similarity=0.267  Sum_probs=30.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEee
Q 024839            4 PRLQGKVAIIMGAASGIGEATAKLFAE-HGAFVIIAD   39 (262)
Q Consensus         4 ~~~~~k~~lItG~s~giG~~ia~~l~~-~g~~V~~~~   39 (262)
                      .++++++++|-| .|.+|+.+|+.|.+ .|+.|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468899999997 99999999999986 599987664

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.29  E-value=0.79  Score=34.22  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-C----CeEEEeeCCchhHHHHHhhh--------CCCceEEEEecCCCHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH-G----AFVIIADIQDELGNQVVSSI--------GPEKASYRHCDVRDEKQVEET   73 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~-g----~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~i~~~   73 (262)
                      .+.+||..|+++|--.++.-+++.. |    .+|+.+.+.++-.+...+.+        +..++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            4789999999999888888887653 4    47999998877555443322        1246888888875411     


Q ss_pred             HHHHHHHhCCcCEEEeCCcCC
Q 024839           74 VAYAIEKYGSLDIMYSNAGVA   94 (262)
Q Consensus        74 ~~~~~~~~~~~d~li~~ag~~   94 (262)
                           ...+++|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1235799999988764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.16  E-value=0.63  Score=36.10  Aligned_cols=31  Identities=26%  Similarity=0.452  Sum_probs=27.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCc
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQD   42 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~   42 (262)
                      |||.| +|..|...|..|+++|++|+++.+..
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            88888 68899999999999999999997654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.11  E-value=0.93  Score=33.27  Aligned_cols=38  Identities=13%  Similarity=0.218  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            5 RLQGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         5 ~~~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      +++||+|+|.|+ |.-|..+|..+++.+..++.+.|+..
T Consensus        29 ~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          29 DFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHhhhccccccccccc
Confidence            578999999985 45699999999999999888777643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.51  E-value=0.71  Score=34.45  Aligned_cols=33  Identities=33%  Similarity=0.407  Sum_probs=28.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchh
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDEL   44 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~   44 (262)
                      |+|.|| |--|...|..|+++|++|+++.+....
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            788884 578999999999999999999887543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.47  E-value=2  Score=33.21  Aligned_cols=73  Identities=14%  Similarity=0.228  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEeeCCchhHHHHHhh-------hCCCceEEEEecCCCHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEH--GAFVIIADIQDELGNQVVSS-------IGPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      .-|.|||.|++.|   .+++.+.+.  ..+|.++..+++-.+...+.       ..+.++.++..|-.      +.   +
T Consensus        78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~------~~---l  145 (285)
T d2o07a1          78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF------EF---M  145 (285)
T ss_dssp             SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HH---H
T ss_pred             CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHH------HH---H
Confidence            4678999999887   345555554  35788888887765544333       23478888888832      22   2


Q ss_pred             HHHhCCcCEEEeCC
Q 024839           78 IEKYGSLDIMYSNA   91 (262)
Q Consensus        78 ~~~~~~~d~li~~a   91 (262)
                      .+...+.|+||..+
T Consensus       146 ~~~~~~yDvIi~D~  159 (285)
T d2o07a1         146 KQNQDAFDVIITDS  159 (285)
T ss_dssp             HTCSSCEEEEEEEC
T ss_pred             hcCCCCCCEEEEcC
Confidence            33335799999886

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=82.42  E-value=3.6  Score=28.89  Aligned_cols=77  Identities=10%  Similarity=-0.041  Sum_probs=44.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC--CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGP--EKASYRHCDVRDEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   84 (262)
                      +|+++|=.|+++|.   ++...+.+|++|+.++.+++..+.+.+.+..  ....+...   +.+   .+.........++
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d---~~~~~~~~~~~~f  111 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVE---VFLPEAKAQGERF  111 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHH---HHHHHHHHTTCCE
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehh---cccccccccCCcc
Confidence            46677766666552   3345667899999999998877655443321  11222222   221   2223333334579


Q ss_pred             CEEEeCCc
Q 024839           85 DIMYSNAG   92 (262)
Q Consensus        85 d~li~~ag   92 (262)
                      |+|+.+.-
T Consensus       112 D~If~DPP  119 (171)
T d1ws6a1         112 TVAFMAPP  119 (171)
T ss_dssp             EEEEECCC
T ss_pred             ceeEEccc
Confidence            99998863

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=82.01  E-value=2.8  Score=27.58  Aligned_cols=80  Identities=13%  Similarity=0.080  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC--CHHHHHHHHHHHHHHhCCc
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR--DEKQVEETVAYAIEKYGSL   84 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~~~   84 (262)
                      +..++||.-=...+-..+...|.+.|++|..+....+.    .+.+.......+.+|+.  +.+.+ ++++++++..+.+
T Consensus         2 ~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a----l~~~~~~~~dlvi~D~~mp~~~G~-e~~~~lr~~~~~~   76 (123)
T d1dbwa_           2 QDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAF----LAFAPDVRNGVLVTDLRMPDMSGV-ELLRNLGDLKINI   76 (123)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHH----HHHGGGCCSEEEEEECCSTTSCHH-HHHHHHHHTTCCC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHH----HHHHhhcCCcEEEEeccCccccch-HHHHHHHhcCCCC
Confidence            35689999999999999999999999998765433322    22332334566777765  43333 5677777766666


Q ss_pred             CEEEeCC
Q 024839           85 DIMYSNA   91 (262)
Q Consensus        85 d~li~~a   91 (262)
                      -+++..+
T Consensus        77 ~iI~lt~   83 (123)
T d1dbwa_          77 PSIVITG   83 (123)
T ss_dssp             CEEEEEC
T ss_pred             eEEEEEe
Confidence            6666654

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=81.93  E-value=3.6  Score=33.39  Aligned_cols=103  Identities=15%  Similarity=0.096  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDV-----RDEKQVEETVAYAIEKYGS   83 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~i~~~~~~~~~~~~~   83 (262)
                      ..++||.|++..=..++..|++.|..|++..-.-.............+...+.+|-     -+.+.+++.+++......+
T Consensus       110 e~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~  189 (431)
T d1m7ya_         110 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  189 (431)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCc
Confidence            35788877777777778888888988887665544333333332223445555543     2577788888877766666


Q ss_pred             cCEEEeCCcCCCCCCCcCCCCHHHHHHHHHH
Q 024839           84 LDIMYSNAGVAGPVGTILDLDMAQFDRTIAT  114 (262)
Q Consensus        84 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~  114 (262)
                      +.+++.+--.+ +.+.  -.+.++++++++.
T Consensus       190 ~~~i~~~nP~N-PtG~--~~s~~~l~~i~~~  217 (431)
T d1m7ya_         190 VKGVLVTNPSN-PLGT--TMTRNELYLLLSF  217 (431)
T ss_dssp             EEEEEEESSCT-TTCC--CCCHHHHHHHHHH
T ss_pred             ceEEEecCccc-cccc--ccccccccccccc
Confidence            66655432222 2222  3577777777664

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=81.49  E-value=3.2  Score=32.49  Aligned_cols=74  Identities=14%  Similarity=0.193  Sum_probs=48.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEeeCCchhHHHHHhhh-------CCCceEEEEecCCCHHHHHHHHHHH
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHG--AFVIIADIQDELGNQVVSSI-------GPEKASYRHCDVRDEKQVEETVAYA   77 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~~   77 (262)
                      ..|.|||.|++.|.   +++.+++..  .+|.++..+++-.+...+.+       .+.++.++..|-.         +.+
T Consensus       106 ~pk~VLIiGgG~G~---~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~---------~~l  173 (312)
T d2b2ca1         106 DPKRVLIIGGGDGG---ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF---------EFL  173 (312)
T ss_dssp             SCCEEEEESCTTSH---HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH---------HHH
T ss_pred             CCCeEEEeCCCchH---HHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH---------HHH
Confidence            46789999988764   444555543  47999998887766554443       2357777777732         223


Q ss_pred             HHHhCCcCEEEeCCc
Q 024839           78 IEKYGSLDIMYSNAG   92 (262)
Q Consensus        78 ~~~~~~~d~li~~ag   92 (262)
                      ++...+.|+||...-
T Consensus       174 ~~~~~~yDvII~D~~  188 (312)
T d2b2ca1         174 KNHKNEFDVIITDSS  188 (312)
T ss_dssp             HHCTTCEEEEEECCC
T ss_pred             HhCCCCCCEEEEcCC
Confidence            344457999998753

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=81.28  E-value=2.7  Score=27.54  Aligned_cols=79  Identities=6%  Similarity=-0.041  Sum_probs=54.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhCCCceEEEEecCC--CHHHHHHHHHHHHHHhCCcCE
Q 024839            9 KVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIGPEKASYRHCDVR--DEKQVEETVAYAIEKYGSLDI   86 (262)
Q Consensus         9 k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~~~d~   86 (262)
                      .++||.--...+...+...|.+.||+|..+....+..+.+.+..   ....+.+|+.  +.+.+ ++++++++....+-+
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~---~~dliilD~~lp~~~G~-el~~~ir~~~~~~pi   78 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLS---TCDLLIVSDQLVDLSIF-SLLDIVKEQTKQPSV   78 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGG---SCSEEEEETTCTTSCHH-HHHHHHTTSSSCCEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcC---CCCEEEEeCCCCCCCHH-HHHHHHHhcCCCCcE
Confidence            46888888999999999999999999998766555444433221   2345666655  33344 667888776556667


Q ss_pred             EEeCC
Q 024839           87 MYSNA   91 (262)
Q Consensus        87 li~~a   91 (262)
                      ++..+
T Consensus        79 i~lt~   83 (118)
T d2b4aa1          79 LILTT   83 (118)
T ss_dssp             EEEES
T ss_pred             EEEEC
Confidence            76654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.16  E-value=0.28  Score=34.14  Aligned_cols=38  Identities=5%  Similarity=0.009  Sum_probs=28.1

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEeeCCchhHHHHHhhhC
Q 024839           16 AASGIGEATAKLFAEHGAFVIIADIQDELGNQVVSSIG   53 (262)
Q Consensus        16 ~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   53 (262)
                      |+|..|+++++.|.+.+..+.+.+|+.++.+++.+...
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            37889999999986644445688999999988887765

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.06  E-value=0.5  Score=33.98  Aligned_cols=36  Identities=14%  Similarity=0.154  Sum_probs=30.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEeeCCch
Q 024839            7 QGKVAIIMGAASGIGEATAKLFAEHGAFVIIADIQDE   43 (262)
Q Consensus         7 ~~k~~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~   43 (262)
                      +++.++|.| +|..|...|..+++.|.+|+++.+...
T Consensus         4 k~~dVvIIG-GGpaGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILG-SGPAGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEEC-CSHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEEeecc
Confidence            456799999 466999999999999999999976654

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=80.49  E-value=0.85  Score=36.25  Aligned_cols=29  Identities=17%  Similarity=0.336  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeC
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADI   40 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r   40 (262)
                      |+|.| +|--|..+|.+|++.|++|.++-+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            67777 778899999999999999999865

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.44  E-value=1.5  Score=32.78  Aligned_cols=62  Identities=13%  Similarity=0.205  Sum_probs=45.0

Q ss_pred             CCCEEEEecCCChHHH-HHHHHHHHcCCeEEEeeCCchhHHHHHhhhCC-CceEEEEecCCCHHHH
Q 024839            7 QGKVAIIMGAASGIGE-ATAKLFAEHGAFVIIADIQDELGNQVVSSIGP-EKASYRHCDVRDEKQV   70 (262)
Q Consensus         7 ~~k~~lItG~s~giG~-~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i   70 (262)
                      .|.+||=.|+++|.-. ++++. .. +..|+.++.+++.++.+.+.... .++..+..|..++...
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~  137 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY  137 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccc
Confidence            4889999999988643 44443 33 34899999999988877666543 5677888888886544

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.35  E-value=1.1  Score=33.74  Aligned_cols=37  Identities=30%  Similarity=0.436  Sum_probs=30.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEeeCCchhHHHH
Q 024839           11 AIIMGAASGIGEATAKLFAEHGAFVIIADIQDELGNQV   48 (262)
Q Consensus        11 ~lItG~s~giG~~ia~~l~~~g~~V~~~~r~~~~~~~~   48 (262)
                      |+|.| +|.-|...|..|+++|.+|.++.+......+.
T Consensus         7 ViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           7 NIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            88888 56788999999999999999999887655444

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.34  E-value=0.59  Score=34.56  Aligned_cols=33  Identities=21%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEeeCC
Q 024839            9 KVAIIMGAASGIGE-----ATAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         9 k~~lItG~s~giG~-----~ia~~l~~~g~~V~~~~r~   41 (262)
                      |++.|+++.||.|+     ++|..|++.|.+|.+++-+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            78999999999886     4677889999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.33  E-value=0.48  Score=36.18  Aligned_cols=32  Identities=19%  Similarity=0.397  Sum_probs=26.6

Q ss_pred             CEEEEecCCChHHHH-----HHHHHHHcCCeEEEeeCC
Q 024839            9 KVAIIMGAASGIGEA-----TAKLFAEHGAFVIIADIQ   41 (262)
Q Consensus         9 k~~lItG~s~giG~~-----ia~~l~~~g~~V~~~~r~   41 (262)
                      |++.|+| -||.|+.     +|..|++.|++|.+++.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D   38 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD   38 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence            6788998 8888875     466899999999998865

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.18  E-value=3.7  Score=32.10  Aligned_cols=73  Identities=23%  Similarity=0.346  Sum_probs=48.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEeeCCchhHHHHH---hhhC-CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024839            6 LQGKVAIIMGAASGIGEATAKLFAEHGA-FVIIADIQDELGNQVV---SSIG-PEKASYRHCDVRDEKQVEETVAYAIEK   80 (262)
Q Consensus         6 ~~~k~~lItG~s~giG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   80 (262)
                      .+||+||-.|+++|+   ++..+++.|+ .|+.++.++ ....+.   +..+ ..+++++..|+.+.+-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            368999999999885   4566778886 588888764 332222   2222 2578899988876421          1


Q ss_pred             hCCcCEEEeCCc
Q 024839           81 YGSLDIMYSNAG   92 (262)
Q Consensus        81 ~~~~d~li~~ag   92 (262)
                      ..++|+++..--
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            136899988653