BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024840
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 287 bits (735), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 188/248 (75%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
+D+D + VLR++G+NI EN++VK+GA+HTL++EL+R F LRK WD++AL+ + A DP
Sbjct: 72 IDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTIALERIEMACDP 131
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 128
T SAD+A V+MQEGLAH+ L+ SMT+ RS+IE SIPRK ++ +E L KF+E V+Q
Sbjct: 132 TQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFYEQVMQ 191
Query: 129 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 188
+ L+HV+F+VV+C +IASPGF +DQF+ ++ +A + + +++NKS+ +LVH SSG+KH
Sbjct: 192 SILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKH 251
Query: 189 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 248
SLRE+L P V+ + DTKAA EV+AL+ F+ ML +P +A YG KHV A E A++TL
Sbjct: 252 SLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQAIETL 311
Query: 249 LITDDLFR 256
LI+D+LFR
Sbjct: 312 LISDNLFR 319
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 183/250 (73%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI EN++VK+GA+HT+E+EL+R F L K +WDS+ LD + QA
Sbjct: 70 ETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSVVLDRIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP AD+A V+MQEGLA+++LV +MT+ R+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDKALERFYEAV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+Q L+H +F+VV+C ++ASPGF KDQF +L EA R+ + ++EN+S+ ++VH+SSG+
Sbjct: 190 MQGILRHFNFDVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKFMVVHSSSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+EVL P V + DTKAA EV+AL+DF+ ML +P RA YG HVE A E +A+
Sbjct: 250 KYSLKEVLCDPAVTARLSDTKAAGEVKALEDFYKMLQQEPDRAFYGLAHVERASEALAID 309
Query: 247 TLLITDDLFR 256
LLI+D LFR
Sbjct: 310 ILLISDTLFR 319
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 180/250 (72%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI EN++VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 ETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSIVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAHI LV SMT+ R++IETSIPRK +E AL KF+E V
Sbjct: 130 DPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEKALEKFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+Q L+H++F+VV+ ++ASPGF ++QF L L A ++ L+ ++EN+ + + VH+SSG
Sbjct: 190 MQGILRHINFDVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKFLQVHSSSGR 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL EVL P V + DTKAA E++AL DF+ ML ++P RA YG K VE A+E +AV
Sbjct: 250 KYSLTEVLCDPAVTARLSDTKAACEIKALGDFYKMLQHEPDRAFYGIKQVEKANEALAVD 309
Query: 247 TLLITDDLFR 256
TLL+TD+LFR
Sbjct: 310 TLLVTDELFR 319
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 182/250 (72%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+
Sbjct: 190 VQAIQRHIHFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E MA+
Sbjct: 250 KYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 182/250 (72%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H+ F+VV+C ++ASPGF ++QF +L +A + + ++EN+S+ + VH SSG+
Sbjct: 190 VQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKFLQVHASSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E MA+
Sbjct: 250 KYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 182/250 (72%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+
Sbjct: 190 VQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHASSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+EVL P V + + DTKAA EV+AL DF+ ML + P RA YG K VE A+E MA+
Sbjct: 250 KYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHGPDRAFYGLKQVEKANEAMAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 183/250 (73%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+
Sbjct: 190 VQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+EVL P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E +A+
Sbjct: 250 KYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 268 bits (684), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 183/250 (73%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP +AD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH+SSG+
Sbjct: 190 VQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHSSSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+ L+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG KHVE A+E MA+
Sbjct: 250 KYVLKEALCDPAVTSRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKHVEKANEAMAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 267 bits (683), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 182/250 (72%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+ L+ + QA
Sbjct: 70 EAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQAC 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++ AL +F+E V
Sbjct: 130 DPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+ + VH SSG+
Sbjct: 190 VQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGH 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE A+E +A+
Sbjct: 250 KYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAID 309
Query: 247 TLLITDDLFR 256
TLLI+D+LFR
Sbjct: 310 TLLISDELFR 319
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 171/250 (68%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ +D+D L ++G+NI EN+ VK+GA+HT+++E +R F L+K WDS+ L+ L+ A
Sbjct: 70 ESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSIDLERLNLAL 129
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
DP +AD+A V++ EGLA++ L+ +MT+TR++I+ +IPRK + +E L KF+E V
Sbjct: 130 DPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEKGLEKFYEAV 189
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
AF++HV+ VV+C ++AS GF KD F +HL+ A+ + E +++ +L H+SSG+
Sbjct: 190 STAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKFMLTHSSSGF 249
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
KH+L+EVL+ P V + DTKA EV+AL F +++ +P RA YG HV A++ +A++
Sbjct: 250 KHALKEVLETPQVALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVNRANQELAIE 309
Query: 247 TLLITDDLFR 256
TLL+ D LFR
Sbjct: 310 TLLVADSLFR 319
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 159/248 (64%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
+D+D + + L I+G+ + VK+G++HTL++ELHR F L K+ WD+ ALD + A +P
Sbjct: 72 MDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAFALDRVDAACNP 131
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 128
+ +A++ V++ EGLA+I L+ MTI R RI+ IPRK + Y+ L+KF+++V Q
Sbjct: 132 SRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQKGLDKFYDSVFQ 191
Query: 129 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 188
+ DF+ ++ ++ASPGF + ++ A + L+ I+++K++ +++H+S+G+ H
Sbjct: 192 SINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSSTGHIH 251
Query: 189 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 248
SL E+L P V + + DTK QE++ L F++++ D +A YGP HV A E A+ L
Sbjct: 252 SLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFELGAIGEL 311
Query: 249 LITDDLFR 256
LI+D LFR
Sbjct: 312 LISDSLFR 319
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 6/249 (2%)
Query: 10 DYDKEGSVLRIRGKNILE-----NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQ 64
D+D + L+ +G + + N + +G + + ++ F + K ++ L++
Sbjct: 73 DFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQKLLNE 132
Query: 65 AADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA-IAGYESALNKFF 123
A + +D A V++QEG+AH+ LV S TI + +IE S+P+K + ++ KF+
Sbjct: 133 ACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFY 192
Query: 124 ENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTS 183
+ + A K ++F+ ++ ++ SPGF + AE + I++NK + H S
Sbjct: 193 KAIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCS 252
Query: 184 SGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERM 243
+GY + EVL P + ++DTK ++E+ + +F L D +A YG K V A E
Sbjct: 253 TGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGEKEVVKAAEYG 312
Query: 244 AVQTLLITD 252
A+ LL+TD
Sbjct: 313 AISYLLLTD 321
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 19/239 (7%)
Query: 19 RIRGKNILE---NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLA 75
R+R ++E + V +G+ HTLE++L+ ++K+ W L L A + +
Sbjct: 79 RLRATGVIERGPEDLVPMGSHHTLEVKLNTPLRIQKEHWSRWTLKRLRMAVRASKNLKAI 138
Query: 76 VVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA--LNKFFENVLQAFLKH 133
+++M++ +A + L+ + R I IP G I + +F+E+++++ K+
Sbjct: 139 ILVMEDDVAELGLIRQYGVEYRGPITGHIP---GKRIQQRDRGKLRREFYESIVESLQKY 195
Query: 134 VDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREV 193
D + +IA PGF K F+ +L+ + P I K+ +L +T +G + + EV
Sbjct: 196 GDLETI---IIAGPGFYKSDFYDYLM------ERYPEIAKKA--VLENTGTGGRAGISEV 244
Query: 194 LDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 252
L V + + + A E++ + +F L DP YG V A AV+ LL+ D
Sbjct: 245 LRKGTVERVSSEKRIASEIRNVNEFLEKLARDPDSVVYGKVEVMDAINMGAVEKLLVLD 303
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 14/228 (6%)
Query: 31 VKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVG 90
V +G +HT+ IE ++K W ++ L +A + + A + +V++ EG A I LV
Sbjct: 93 VPLGKYHTITIEEGTVVTIQKPRWKEHHIERLKEAIEASKRAKVMIVVIDEGEADIALV- 151
Query: 91 RSMTITRSRIETSIPRKHGPAI--AGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPG 148
R + + SI R G ES +FF ++ + + ++ + A++A PG
Sbjct: 152 REYGV---EMVASIRRNLGGKRYNTDRESEEKRFFHDLAKTMAELMEREKIEKAIVAGPG 208
Query: 149 FTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKA 208
F K+ FH+ L R+ P E ++++ TS + + EV+ V + + +
Sbjct: 209 FVKEDFHKFL------RENYP--ELAKKVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRV 260
Query: 209 AQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
A+EVQ ++ + + A YG + VE A AV+TLL+ D+L +
Sbjct: 261 AKEVQLVEKVLEHVARNTGLATYGLREVEEAVNYGAVETLLVLDELLK 308
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 18 LRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 76
LR+ G + + + V +G +HT+ +E ++K+ W S ++ + +A + + A + +
Sbjct: 79 LRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEASKRAKVMI 138
Query: 77 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 136
V M++G A + +V + I +I K E KFF +V + ++
Sbjct: 139 VAMEDGEAEVAIVREYGLDFIASIRHNIGGKR--YNVKREDEEKKFFHDVAKTIKDLIER 196
Query: 137 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 196
V+ ++A PGF K+ F+ L R+ P E +++L TS G + + EV+
Sbjct: 197 ENVQKVIVAGPGFYKENFYGFL------RENYP--ELAGKVVLDDTSMGGRVGVYEVIKR 248
Query: 197 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
V + +T+ AQE++ ++ + D YG K VE A AV TLL+ D+L +
Sbjct: 249 GTVDKVYTETRVAQEIKLVEKVIERIAKDEP-VAYGLKDVEEAVNYGAVDTLLVLDELLK 307
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 20/249 (8%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V++ K + LR+ G+ + + ++G HTL +E H + K L A D L +A +
Sbjct: 73 VEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPDQA-DRLEEAVEA 131
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 128
T + D+A+ ++EG AH+ V + T R+ I ++ + Y + F+ L
Sbjct: 132 TENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGKGE------YARPRKELFDE-LA 184
Query: 129 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 188
+ LK D V ++A PGFTK H E I + +I +V TS+
Sbjct: 185 SVLKRQD---VDAYILAGPGFTKQDALDHFQDE--------IPDIAEQITVVDTSAVGDR 233
Query: 189 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 248
+ EVL V ++ + T+ A+E + + + + + YGP+ V A + A++TL
Sbjct: 234 GVHEVLKRGAVEDVQQQTRIAEEADYIDELMARIGS-GSEVAYGPEEVAKAADYGAIETL 292
Query: 249 LITDDLFRL 257
L+ D+ RL
Sbjct: 293 LVLDERLRL 301
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 19/256 (7%)
Query: 6 SQVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQ 64
++ +++ K + +R+ G + + E V +G +HT+ IE ++K W ++ L +
Sbjct: 67 AEKINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWKEHHIERLRE 126
Query: 65 AADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALN 120
A + A + +V++ +G A + LV R + I TSI +H Y E+
Sbjct: 127 AVSASKRARVMIVVIDDGEADMALV-REYGV---EILTSI--RHNLGGKRYNTDREAEEK 180
Query: 121 KFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILV 180
+FF +V + + ++ V A++A PGF K+ F++ L R+ P E ++++
Sbjct: 181 RFFHDVAKTMEEIMNREKVEKAIVAGPGFVKEDFYKFL------RENYP--ELVKKVVIE 232
Query: 181 HTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAH 240
TS + + EV+ V + + + A+EVQ ++ + + YG + VE A
Sbjct: 233 DTSVTGRTGIYEVIKRGTVDRVYHENRVAKEVQLIEKVLENIAKNNGLVAYGLREVEEAA 292
Query: 241 ERMAVQTLLITDDLFR 256
AV+TLL+ D+L +
Sbjct: 293 NYGAVETLLVLDELLK 308
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 31 VKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVG 90
+ +G+ HT+E++L+ ++K+ W + AL L+QA + + +VL+++ A + L+
Sbjct: 94 IPLGSHHTVEVKLNTPITIKKEKWANWALKRLNQAIEASKKLAAIIVLLEDDTATLGLMR 153
Query: 91 RSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFT 150
+ I+ S+ K A+ +F+E V+++ K F+ ++ V+A PGF
Sbjct: 154 QFGIEYYGPIKGSVSGKR-IVDKNRSKAIAQFYEKVIESVNK---FHDIQNIVVAGPGFV 209
Query: 151 KDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQ 210
K+ F+ ++ + + + IIE+ T SG + + EVL V + + + A
Sbjct: 210 KNDFYDYIKNKHKDLADKAIIES--------TGSGGRVGIHEVLKKGTVEKLTVENRVAS 261
Query: 211 EVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITD 252
E+ A+ + + + ++ YG K A AV+ LL+ D
Sbjct: 262 EMVAINNLLEEIGKNSSKVAYGEKETVKAINLGAVKQLLVLD 303
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 20/248 (8%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V++ K + LR+ G + + ++G HT +E H + K +W L+ L +A +
Sbjct: 73 VEFAKFANRLRVGGDIVDCSREDQLGFHHTFNVEEHDELTVEK-VWQVDQLERLEEAVEA 131
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 128
D+A+ ++EG AHI V + R+ I + + Y + ++ FE L
Sbjct: 132 AEQPDVAIATVEEGQAHIHTVAQYGVEERASITGTTGKGE------YARSRDELFEE-LA 184
Query: 129 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 188
A L+ +D + ++A PGFTK H+ A P E +I +V T+S
Sbjct: 185 AILRRLDAEAI---ILAGPGFTKQDALEHIEDNA------P--EAAEKIQVVDTASVGDR 233
Query: 189 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 248
+ EVL V + +T+ ++E + + + + + +A YG V A E A++TL
Sbjct: 234 GVHEVLKRGAVDRIQTETRVSKEAELIDELMERI-GEGEKAAYGVDEVAEAAEFGAIETL 292
Query: 249 LITDDLFR 256
LI D+ R
Sbjct: 293 LILDERLR 300
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 44/265 (16%)
Query: 9 VDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAAD 67
+++ K + LR+ G I + E V +G +HT+ +E L+K+ W ++ L +A +
Sbjct: 70 INFHKFANQLRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPYYIERLKEAVE 129
Query: 68 PTASADLAVVLMQEGLAHILLV----------------GRSMTITRSRIETSIPRKHGPA 111
+ A + +V +++G A + +V G+ I R
Sbjct: 130 ASKRAKVMIVTIEDGEAEMAIVREYGLDFIATIRHNLGGKRYNIKR-------------- 175
Query: 112 IAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPII 171
E KFF +V + + ++ A++A PGF K+ F++ L ++ P +
Sbjct: 176 ----EDEERKFFHDVAKTMKDVMSRENIQRAIVAGPGFYKEDFYKFL------KENYPDL 225
Query: 172 ENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACY 231
S+I+L TS G + + EV+ V + +++ A E++ ++ + D Y
Sbjct: 226 --ASKIVLDDTSMGGRVGIYEVIKRGTVDKVYSESRIANEIKLVEKVIERIAKDEP-VAY 282
Query: 232 GPKHVEVAHERMAVQTLLITDDLFR 256
G K VE A AV+ LL+ D+L +
Sbjct: 283 GMKEVEEAVNYGAVEILLVLDELLK 307
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 18 LRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVV 77
LRI+G I + + GA+HTL IE + + K W S ++ + A + + ++ +V
Sbjct: 81 LRIKGTIISD---LDAGAYHTLNIEPYSELSIAKH-WKSDQIERIRDAVEASKRPEVEIV 136
Query: 78 LMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFN 137
++EG A I + + SRI + K A A +FF V A LK+ D
Sbjct: 137 TIEEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFGEVA-AQLKYAD-- 193
Query: 138 VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAP 197
V+ V+A PGF KD F + L R P + K +I+ TSS +EVL
Sbjct: 194 KVQTIVVAGPGFIKDDFVKFL------RVNHPAVAQK--VIVEDTSSIGSSGFQEVLRRG 245
Query: 198 NVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFRL 257
+ + ++ + +E Q ++ + + D +A YG + A + AV+TLLI D+ R
Sbjct: 246 AIQRVAEENRITREAQLIEALLSEIAKD-GKATYGFAETKRAVDYGAVETLLIADETLRG 304
Query: 258 VCSKS 262
+ K
Sbjct: 305 LREKG 309
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 18/242 (7%)
Query: 18 LRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 76
LRIRG + E + G +HTL IE + ++ K+ W L+ + + LA
Sbjct: 75 LRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSENELEIISRFTSRKQKVLLAT 134
Query: 77 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 136
E A I L+ ++IP K P + ++ L K+ ++ + L +++
Sbjct: 135 FDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVL--FQKGLEKYLSSIAEKILDYINK 190
Query: 137 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSS-GYKHSLREVLD 195
V VIASPG + ++R R I E K I+ T S G + +RE+L
Sbjct: 191 FQVDIVVIASPG------------DLQKRVARIIKEKKPVNIITDTVSIGGQSGIRELLR 238
Query: 196 APNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
+V +K+T + + L +F L+ +P YG VE A + AV LL++++L
Sbjct: 239 RDSVREAVKETNIIKAQRILDEFHKNLSKNPDMVAYGIDDVEYAVKYNAVDKLLVSEELL 298
Query: 256 RL 257
R+
Sbjct: 299 RI 300
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 124/260 (47%), Gaps = 21/260 (8%)
Query: 3 FFVS---QVVDYDKEGSVLRIRGKNILEN---EHVKIGAFHTLEIELHRAFVLRKDLWDS 56
FF+ + +++ K +LR G I+E+ + + +G+ HT+ ++L+ + ++K +W+
Sbjct: 62 FFLGIRVEKINFHKYTGMLRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKK-IWNK 118
Query: 57 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 116
+L+ L+QA + + A+ +V +++ + ++ + I I K
Sbjct: 119 WSLERLNQAIEASNRANEIIVAIEDNTTELGIIKQYGIDYIGPIIGDISGKQNIE-KNRA 177
Query: 117 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 176
+N+++E++ + + D + + +I PGFTK+ ++ +L E +L +
Sbjct: 178 QKVNEYYEDITKTLTQQKDIDKL---IIIGPGFTKNGYYNYL--EENYPKL------AKK 226
Query: 177 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 236
+IL T +G ++EVL + ++ KD K A+E + + YG K V
Sbjct: 227 VILESTGAGGHAGIQEVLKNGLIESLSKDAKIAKEAALVNKLLEQIGKSSNTVTYGKKQV 286
Query: 237 EVAHERMAVQTLLITDDLFR 256
A AV+ LL+ +DL R
Sbjct: 287 ITASNMGAVEKLLVLEDLVR 306
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 6 SQVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQ 64
++ +++ K + +R+ G + + E V +G +HT+ IE ++K W ++ L +
Sbjct: 67 AEKINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEHHIERLKE 126
Query: 65 AADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALN 120
A + A + +V++ +G A + LV R + I SI +H Y ES
Sbjct: 127 AVAASKRARVMIVVIDDGEADMALV-REYGV---EILNSI--RHNLGGKRYNTDRESEEM 180
Query: 121 KFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILV 180
KFF +V + + + V A++A PGF K+ F++ L ++ P E ++++
Sbjct: 181 KFFHDVAKTMEEVMKRENVEKAIVAGPGFVKEDFYKFL------KEKYP--ELAKKVVIE 232
Query: 181 HTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAH 240
TS + + EV+ V + ++ + A+EVQ ++ + + YG K VE A
Sbjct: 233 DTSVTGRTGIYEVIKRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGLKEVEEAV 292
Query: 241 ERMAVQTLLITDDLFR 256
AV+TLL+ D+L +
Sbjct: 293 NYGAVETLLVLDELLK 308
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 18 LRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 76
LRI G I + E V +G +HTL +E ++K+ W + ++ L +A + + A + +
Sbjct: 79 LRITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYHIERLKEAIESSKKARVMI 138
Query: 77 VLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQA 129
V +++G A I +V S+T S +I R + KFF V ++
Sbjct: 139 VAIEDGEAEIAIVREYGLDFVGSITYNISGKRYNIKR---------DDEEKKFFHEVAKS 189
Query: 130 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHS 189
+ + + A++A PGF K+ F L R+ P E +++ TS G +
Sbjct: 190 MEELMKRENIEKAIVAGPGFYKENFVNFL------RENYP--ELAKKVVTDDTSMGGRTG 241
Query: 190 LREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLL 249
+ EV+ V + +++ ++E++ ++ + + YG K VE A AV+TL+
Sbjct: 242 IYEVIKRGTVDKVYTESRISKEIKLVEKVIEEIAKNGL-VAYGLKEVEEATNYGAVETLI 300
Query: 250 ITDDLFR 256
+ D L +
Sbjct: 301 VLDSLLK 307
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 33 IGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRS 92
+G++HTL IE+ + K+ W + L + A + + + +V ++EG A I V
Sbjct: 93 VGSYHTLNIEIGTNLSVIKEHWKNDQLQRIKDAEEASKRPKVVMVAIEEGDADIGFVHHY 152
Query: 93 MTITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTK 151
S I S ++ E+ L N+FF V++ V VIA PGFTK
Sbjct: 153 GIEIYSHIRQSSGKR--------ETGLRNEFFREVVEQLRHAVPEEA--SIVIAGPGFTK 202
Query: 152 DQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQE 211
+ F ++ + +IE+ S I + SG++ EVL V ++++++ A+E
Sbjct: 203 EDFIKYFQETEPAMASKALIEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARE 254
Query: 212 VQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
++D ++ D +A YG V+ A AV+TLL+ D+ R
Sbjct: 255 SALMEDLIREISMDG-KAAYGLGDVKNALNFGAVETLLVADETLR 298
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIEL-HRAFVLRKDLWDSLALDTLHQAAD 67
V++ G LRI G I+E+ + GA+HT+ +E + V+R+ W + L+ L +A
Sbjct: 72 VEFSHHGVRLRISG--IIEH-GMDTGAYHTINVETGYEISVIRR--WRPVDLERLDRAVK 126
Query: 68 PTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVL 127
+ + ++ ++EG A + + + E+ I G G FF+ V+
Sbjct: 127 ASVYGVIHILTLEEGEAELF------RLRQYGPESVITITAGSGKGGETETRTGFFDTVI 180
Query: 128 QAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYK 187
++ + V VIA PGF K+ F R+ A+ + P R I+ T +
Sbjct: 181 KSIAE-----VSGPMVIAGPGFVKEDFVRY----AKNKNCAP----AGRAIVAETRRIGR 227
Query: 188 HSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQT 247
++++V+ A + +I D + ++EV+ + + ++ D A YG K V A E AV
Sbjct: 228 GAVQDVIGAGTLEKLIGDLQLSREVRLMDEVLLRISRDGAIA-YGYKDVATAIEYGAVDE 286
Query: 248 LLITDDLFR 256
+L+ D L R
Sbjct: 287 VLLADSLLR 295
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 18 LRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVV 77
LR+ G + + ++ A HT+ +E H + K + + L +A + + D+A+
Sbjct: 82 LRVSGVIVGCSREDQLNAHHTINVEEHDEITVEKH-FKPDQTERLEEATEAAENPDVAIA 140
Query: 78 LMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFN 137
++EG A++ V + T + + P G Y + F + +A L H+D +
Sbjct: 141 TVEEGAAYVHTVQQYGTEEYASF--TKPTGKGD----YSRPREELFAELGEA-LAHLDAD 193
Query: 138 VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAP 197
V ++A PGFTK ++ E R L RI V TS+ + EVL
Sbjct: 194 AV---ILAGPGFTKQDALDYIT--EEYRDL------ADRITTVDTSAAGDRGVHEVLKRG 242
Query: 198 NVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
V + K+T+ ++E + D + +A YGP+ V A E A++TLL+ DD R
Sbjct: 243 AVDEVQKETRISKEATLIDDLTAEIAQ-GAKATYGPEDVAEAAEFGAIETLLVVDDRLR 300
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
G++HTL +E+ + K+ W + L + A + + +V ++EG A I V
Sbjct: 94 GSYHTLNVEIGTNISIIKEHWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYG 153
Query: 94 TITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKD 152
S I S ++ E+ L N+FF +++ V + VIA PGFTK+
Sbjct: 154 IEVYSHIRQSSGKR--------ETGLRNEFFREIVEQLRHAVPEDA--SIVIAGPGFTKE 203
Query: 153 QFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEV 212
F ++ + + E+ S I + SG++ EVL V ++++++ A+E
Sbjct: 204 DFLKYFNETESEMASKALTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARES 255
Query: 213 QALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
++D ++ D +A YG V+ A AV+TLLI D+ R
Sbjct: 256 SLMEDLIREISMDG-KAAYGFADVKNALGYGAVETLLIADETLR 298
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 17/251 (6%)
Query: 6 SQVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 65
++ + +D+ + LR+ G I E V IG++HT++IE + ++K+ W L L A
Sbjct: 67 AEKIKFDENTNRLRVSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQKN-WKKWDLQRLKDA 125
Query: 66 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 125
+ + VV+M + A + ++ I++ + +K E+ ++
Sbjct: 126 ENSAKKPKIIVVIMDDSDATVFIIRDYGVKEIGHIKSRLSKKLDYKRQDQENI--NYYNE 183
Query: 126 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 185
+L+ + ++A PGFTK+ F ++ L E + L+ R++ T+
Sbjct: 184 ILEVMSPYEG-----KILVAGPGFTKNNFQKY-LSEKHKDMLQ-------RVVFESTNHT 230
Query: 186 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 245
+ L EVL + V + + + ++E Q + ++ A YG V+ A A+
Sbjct: 231 GRLGLAEVLKSGIVDRIYGEARLSKETQLVNKLLEEISKKGL-AVYGVDDVKNALNYSAI 289
Query: 246 QTLLITDDLFR 256
+TLLITD+ R
Sbjct: 290 ETLLITDEFLR 300
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 21/249 (8%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V++DK + LRI+G ++E+ + G+ HT+ + + + KD W+ L+ + +A
Sbjct: 71 VEFDKYANRLRIKG--VIEH-GPESGSHHTVNVTTGKRIKIVKDEWERKDLERIEEAEMS 127
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTI-TRSRIETSIPRKHGPAIAGYESALNKFFENVL 127
L V EG I+ R + +R+ ++P K G + + KFF +
Sbjct: 128 RPPVMLVAVDTGEGTIGIV---RDYGLDVVARVRHNVPGKRG---GDRRAEMRKFFHRLA 181
Query: 128 QAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYK 187
+ + V V+ PGF K F L E R + +E+ T S +
Sbjct: 182 DEIERIAEEEGVEHIVVGGPGFVKSDFAEFL---REERDIPAHVED--------TGSAGE 230
Query: 188 HSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQT 247
L E++ V +++++ A+EV+ L++ F + + YG + A E A+
Sbjct: 231 AGLIEMIRRGAVERAVEESRVAEEVKHLEEVFKRIGKGDDKVAYGVRECLKAAEFGAIDV 290
Query: 248 LLITDDLFR 256
LL+ D+ FR
Sbjct: 291 LLVADEKFR 299
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 33 IGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRS 92
+G++HTL +E+ + K+ W + L + A + + +V ++EG A I V
Sbjct: 93 VGSYHTLNVEIGTNISIIKERWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHY 152
Query: 93 MTITRSRIETSIPRKHGPAIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTK 151
S I S ++ E+ L ++FF ++ V + VIA PGFTK
Sbjct: 153 GIEVYSHIRQSSGKR--------ENGLRSEFFREIVDQLRHAVPEDA--SIVIAGPGFTK 202
Query: 152 DQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQE 211
+ F ++ + + E+ S I + SG++ EVL V ++++++ A+E
Sbjct: 203 EDFLKYFHETEPEMASKALTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARE 254
Query: 212 VQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFR 256
++D ++ D +A YG V+ A + AV+TLLI D+ R
Sbjct: 255 SSLMEDLLREISMD-GKAAYGFADVKNALKYGAVETLLIADETLR 298
>sp|A6UR75|PELO_METVS Protein pelota homolog OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=pelA PE=3 SV=1
Length = 348
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 25/252 (9%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V + +E + LR+ GK I E + IG++HTL+IE ++K+ W L L +A +
Sbjct: 70 VSFHEEVNRLRVSGKIIHAPEDIPIGSYHTLDIEPFTQISIQKN-WKKWDLTRLKEAEES 128
Query: 69 TASADLAVVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNKFFE 124
+ VV++ + A I V + + +S + I K A Y +
Sbjct: 129 GKRPKVVVVILDDSEADIFTVRDFGVKELASIKSGVSKRIDSKQNEQ-AKY------LYY 181
Query: 125 NVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSS 184
N + L D + + A PGF+K+ ++ +E+ + + S+I++ T+
Sbjct: 182 NEIITTLSEFDGKI----LFAGPGFSKNNIQNYI---SEKHK-----DLASKIVIESTNH 229
Query: 185 GYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMA 244
+ L E+L + + + + + ++E Q ++ ++ A YG V+ + A
Sbjct: 230 TGRLGLSEILKSGIIDRIYGEARLSKESQIIEKLLEEISKKRL-ASYGLNSVKNSINYSA 288
Query: 245 VQTLLITDDLFR 256
V+TLLITD+ R
Sbjct: 289 VETLLITDEFLR 300
>sp|A9A8K6|PELO_METM6 Protein pelota homolog OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pelA PE=3 SV=1
Length = 348
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 21/253 (8%)
Query: 6 SQVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 65
++ +++ ++ + LR+ GK I + + IG++HT++IE ++K+ W L L A
Sbjct: 67 AEKINFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDA 125
Query: 66 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 125
D + + VV+M + A I LV + I++ I +K E A ++ +
Sbjct: 126 EDSSKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGISKKLD--YKQNEQAKFSYYSD 183
Query: 126 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP--IIENKSRIILVHTS 183
++ + ++ + A PGF K+ + + + + L P +IE+ + HT
Sbjct: 184 IINSISEYEG-----KILFAGPGFGKNNIQNY--ISEKHKDLAPNVVIESAN-----HTG 231
Query: 184 SGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERM 243
K L E+L + + + + + ++E Q ++ ++ A YG + V A
Sbjct: 232 ---KSGLSEILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVSNAMNYS 287
Query: 244 AVQTLLITDDLFR 256
A+ TLL+TD+ R
Sbjct: 288 AIDTLLLTDEYLR 300
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 20/250 (8%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V++D+ +RI G I + V +G+ HT+EI+ + K+ W ++ + +A +
Sbjct: 70 VEFDENTKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKN-WKKWQIERIKEAIES 128
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE--SALNKFFENV 126
+ + VV+M + A I V R +I E + H Y+ L K + +
Sbjct: 129 SKRPKVLVVVMDDEEADIFEV-RDYSIK----EICSIKSHTSKKLDYKINEELKKEYYHE 183
Query: 127 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 186
+ L D + + ++A PGF K+ F+ + ++ +L K++I++ S+
Sbjct: 184 IAKVLSEYDVDNI---LVAGPGFAKNSFYN--FISSQYPEL------KNKIVVESISTTS 232
Query: 187 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 246
+ L EV+ + + +++ A+E Q ++ + A YG V+ A E A+
Sbjct: 233 RAGLNEVIKRGIINRIYAESRVAKETQLIEKLLEEIAKKGL-AVYGIDEVKKALEYSAID 291
Query: 247 TLLITDDLFR 256
TLL++D L R
Sbjct: 292 TLLVSDSLVR 301
>sp|A6VI74|PELO_METM7 Protein pelota homolog OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pelA PE=3 SV=1
Length = 348
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 115/251 (45%), Gaps = 17/251 (6%)
Query: 6 SQVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 65
++ +++ ++ + LR+ GK I E + IG++HT++IE ++K+ W L L A
Sbjct: 67 AEKINFHEDFNRLRVSGKIIHAPEDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDA 125
Query: 66 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 125
D + + VV+M + A I LV + I++ + +K E A ++ +
Sbjct: 126 EDSSKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSD 183
Query: 126 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 185
++ + + + + + A PGF K+ + + + + L P +++ +
Sbjct: 184 IINS-ISEFEGKI----LFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHT 230
Query: 186 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 245
K L E+L + + + + + ++E Q ++ ++ A YG + V A A+
Sbjct: 231 GKSGLSEILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVNNAMNYSAI 289
Query: 246 QTLLITDDLFR 256
TLL+TD+ R
Sbjct: 290 DTLLLTDEYLR 300
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 32 KIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGR 91
++G HTL + + K W L+ L++A + T D+A+ ++EG AHI +V +
Sbjct: 96 QLGLHHTLNVAEREELEVEKH-WQPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQ 154
Query: 92 -------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVI 144
S T T + E + + ++ F + A + ++
Sbjct: 155 YGVDEQGSFTATTGKGEQN------------DRGRDELFGTLADALARM----QADAIIL 198
Query: 145 ASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIK 204
A PGFTK H+ E P ++ I +V TS+ + EVL V ++ +
Sbjct: 199 AGPGFTKQDALDHITEEY------PDLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQE 250
Query: 205 DTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFRL 257
+T+ A+E + + + + D +A YG V+ A E AV+ LLI D+ RL
Sbjct: 251 ETRIAEESELIDELTTQMATDG-KAAYGIDEVQKAVEFGAVEDLLILDERLRL 302
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 32 KIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGR 91
++G HTL + + K W L+ L++A + T D+A+ ++EG AHI +V +
Sbjct: 96 QLGLHHTLNVAEREELEVEKH-WQPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQ 154
Query: 92 -------SMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVI 144
S T T + E + + ++ F + A + ++
Sbjct: 155 YGVDEQGSFTATTGKGEQN------------DRGRDELFGTLADALARM----QADAIIL 198
Query: 145 ASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIK 204
A PGFTK H+ E P ++ I +V TS+ + EVL V ++ +
Sbjct: 199 AGPGFTKQDALDHITEEY------PDLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQE 250
Query: 205 DTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLFRL 257
+T+ A+E + + + + D +A YG V+ A E AV+ LLI D+ RL
Sbjct: 251 ETRIAEESELIDELTTQMATDG-KAAYGIDEVQKAVEFGAVEDLLILDERLRL 302
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 6 SQVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 65
++ +++ ++ + LR+ GK I + + IG++HT++IE ++K+ W ++ L +A
Sbjct: 67 AEKINFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQKN-WKKWDIERLKEA 125
Query: 66 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 125
D + + VV+M + A I LV + I++ + +K E A ++ +
Sbjct: 126 EDSSKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSD 183
Query: 126 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 185
++ + + + + + A PGF ++ + + + + L P +++ +
Sbjct: 184 IINS-ISEFEGKI----LFAGPGFGRNNIQNY--ISEKYKSLAP------NVVVESANHT 230
Query: 186 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 245
K L E+L + + + + + ++E Q ++ ++ A YG + V A A+
Sbjct: 231 GKSGLSEILKSGIIDKIYGEARISKETQVVEKLLEEISKKGL-AAYGIESVNNAMNFSAI 289
Query: 246 QTLLITDDLFR 256
TLL+TD+ R
Sbjct: 290 DTLLLTDEYLR 300
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 115/255 (45%), Gaps = 25/255 (9%)
Query: 6 SQVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 65
++ +++ ++ + LR+ GK I + + IG++HT++IE ++K+ W L L +A
Sbjct: 67 AEKINFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLVRLKEA 125
Query: 66 ADPTASADLAVVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNK 121
D + + VV++ + A I LV + + +S + + K E A
Sbjct: 126 EDSSKKPKVVVVILDDSEADIFLVREFGIKELVSIKSGVSKKLDYKQN------EQAKFS 179
Query: 122 FFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVH 181
++ +++ + +F + A PGF K+ + + + + L P +++
Sbjct: 180 YYSDIINSI---SEFE--GKILFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVES 226
Query: 182 TSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHE 241
+ K L E+L + + + + + ++E Q ++ ++ A YG + V A
Sbjct: 227 ANHTGKSGLSEILKSGIIDKIYGEARISKETQVIEKLLEEISKKGL-AAYGIESVNNAMN 285
Query: 242 RMAVQTLLITDDLFR 256
A+ TLL+TD+ R
Sbjct: 286 YSAIDTLLLTDEYLR 300
>sp|C3N8Q8|PELO_SULIY Protein pelota homolog OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=pelA PE=3 SV=1
Length = 344
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W+ ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|C3NMR0|PELO_SULIN Protein pelota homolog OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=pelA PE=3 SV=1
Length = 344
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W+ ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|C3MJN7|PELO_SULIL Protein pelota homolog OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=pelA PE=3 SV=1
Length = 344
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W+ ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|Q12W71|PELO_METBU Protein pelota homolog OS=Methanococcoides burtonii (strain DSM
6242) GN=pelA PE=3 SV=1
Length = 347
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 9 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 68
V++ K + LR+ G L + G +HTL IE + K W L+ +++A
Sbjct: 73 VEFHKFSNRLRVHG---LIEHGMDAGFYHTLNIEDGTNLSITK-YWKKDQLERVNEAEAA 128
Query: 69 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 128
+ + +V ++EG A I V R I I + I + G E L + F + +
Sbjct: 129 SKRPKVILVAIEEGDADIGFV-RHYGI---EIYSHITQSSGKG----EGTLREVFFSTIL 180
Query: 129 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 188
L H + V++ PGFTKD F ++ + ++E+ S I + SG++
Sbjct: 181 DQLTHA-MSGTESVVVSGPGFTKDDFMKYASSKNSDLVAGILVEDTSSIGM----SGFQ- 234
Query: 189 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 248
EVL V ++++++ A+E + + D + YG V+ A + AV+TL
Sbjct: 235 ---EVLRRGAVDRIMEESRIARESSLMDSLLKEIALDG-KVAYGMDEVKQAIDFGAVETL 290
Query: 249 LITDDLFRL 257
L+ D++ RL
Sbjct: 291 LVADEMLRL 299
>sp|C3N044|PELO_SULIA Protein pelota homolog OS=Sulfolobus islandicus (strain M.16.27)
GN=pelA PE=3 SV=1
Length = 344
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWSKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|Q4JCI0|PELO_SULAC Protein pelota homolog OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pelA PE=3 SV=1
Length = 342
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K+ W + L+ + + + +A+V + E + +L+
Sbjct: 90 GAHHTVNLDIGDEVIIIKEQWSNYELEKIREQEEKKGKLLIALVDVDEYIIALLMKQGVK 149
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
+ ++T P K + N+ E + + V V +IA PG KD
Sbjct: 150 ILAEKSLQT--PGKDNDVV-------NENIEEMANEIISFVKLTGVNVIIIAGPGPFKDM 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
++ + +Q I+NK + + SS + L E+L + + ++ + AQ+++
Sbjct: 201 VNQKI------KQ----IDNKLIVYVDSVSSASRAGLNELLRRDIIDQVYREFEIAQQLK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDD 253
L+ L + YG + ++ A+E AV LLIT+D
Sbjct: 251 ILESIMENLAKNTGLVVYGIEDIKKANELGAVDKLLITED 290
>sp|C3MYZ5|PELO_SULIM Protein pelota homolog OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=pelA PE=3 SV=1
Length = 344
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWSKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|C4KJ83|PELO_SULIK Protein pelota homolog OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=pelA PE=3 SV=1
Length = 344
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 34 GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSM 93
GA HT+ +++ ++ K W ALD L + AD + +A+V E L I + +
Sbjct: 90 GAHHTINLDIGDEIIIIKQQWSKYALDKLKKQADKRSKIIIALVDFDEYLIAIPF-EQGI 148
Query: 94 TITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQ 153
I + S+ + G ++AL E L ++K + + + ++A PGF K++
Sbjct: 149 KILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNPDAI---LLAGPGFFKEE 200
Query: 154 FHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 213
+ ++ I++NK ++ + SS + L E+L + ++ D + A +
Sbjct: 201 VAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKRDIIDKIMSDYEIAIGAK 250
Query: 214 ALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 255
++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 251 KMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 7 QVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 66
+ V++ + LRI G + V IG++HTL IE + K W L + +A
Sbjct: 70 EAVEFHTYSNWLRIHG---VIKSGVDIGSYHTLNIEAGSELSIIK-RWRPDELQRIEEAV 125
Query: 67 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 126
+ + + L++EG A I ++ + T + I + +V
Sbjct: 126 AESNRPRVVLALVEEGEATIGVLRQFGVQTVAEIRGG--------------SGKGSGSSV 171
Query: 127 LQAFLKHVDFNVVRCA------VIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILV 180
FLK V + A V+A PGFTK+ + ++EA L R+ +
Sbjct: 172 RDDFLKEVADQIANSAGDDAYVVLAGPGFTKEDLRK--VMEARYPDL------LKRLTMD 223
Query: 181 HTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAH 240
SS + +EVL V +++ ++ ++E + + D + D RA YG + V A
Sbjct: 224 DASSTGRSGFQEVLRRGTVDRIVEASRISRETRLMDDLMKEIATD-GRAAYGIREVREAA 282
Query: 241 ERMAVQTLLITDDLFR 256
A++TL+I D L R
Sbjct: 283 NYGAIETLMIVDQLVR 298
>sp|Q5JGK6|RF1_PYRKO Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=prf1 PE=3
SV=1
Length = 415
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 119 LNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRII 178
+ + E+ +AFL ++ +R +I PG TK++F L E R K I
Sbjct: 196 MKRIGEHANKAFLPLLEKGELRGIIIGGPGPTKEEFVEGDYLHHELR--------KKVIG 247
Query: 179 LVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEV 238
+V S ++ LRE+++ + +++KD +A +E Q +++FF L D YG K V
Sbjct: 248 VVDISYHGEYGLRELVEKAS--DILKDHEAVKERQLIQEFFKHLVKDTGMITYGEKEVRK 305
Query: 239 AHERMAVQTLLITD 252
A E AV LLI++
Sbjct: 306 ALELGAVDKLLISE 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,291,870
Number of Sequences: 539616
Number of extensions: 3431849
Number of successful extensions: 11605
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 11467
Number of HSP's gapped (non-prelim): 100
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)