Query 024846
Match_columns 261
No_of_seqs 196 out of 1322
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:26:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024846hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 6.7E-57 2.3E-61 423.8 15.7 203 35-237 2-236 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 6.8E-47 2.3E-51 359.9 19.5 176 32-207 24-200 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 1.4E-46 4.7E-51 354.9 17.3 179 29-207 7-186 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 5E-45 1.7E-49 343.8 20.0 174 34-207 3-176 (370)
5 1p4c_A L(+)-mandelate dehydrog 100.0 3.7E-44 1.3E-48 339.3 19.3 174 33-207 3-176 (380)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 2.1E-43 7.3E-48 345.8 17.5 179 29-207 116-300 (511)
7 2qr6_A IMP dehydrogenase/GMP r 99.8 7.8E-22 2.7E-26 186.1 -3.4 131 46-185 13-160 (393)
8 1vcf_A Isopentenyl-diphosphate 99.7 4E-18 1.4E-22 157.6 0.1 126 54-190 8-155 (332)
9 3sr7_A Isopentenyl-diphosphate 99.6 2.6E-15 8.9E-20 141.7 6.5 151 72-236 54-227 (365)
10 3r2g_A Inosine 5'-monophosphat 99.5 3E-14 1E-18 134.3 8.2 110 73-192 9-122 (361)
11 1p0k_A Isopentenyl-diphosphate 99.5 4.2E-14 1.4E-18 131.2 7.9 119 70-192 21-152 (349)
12 3vkj_A Isopentenyl-diphosphate 99.3 7.5E-12 2.6E-16 118.1 7.8 116 72-190 27-158 (368)
13 1ypf_A GMP reductase; GUAC, pu 99.1 1.4E-11 4.6E-16 114.3 0.7 114 65-188 7-128 (336)
14 2c6q_A GMP reductase 2; TIM ba 99.0 1.8E-10 6.2E-15 107.8 5.0 151 66-237 14-180 (351)
15 1eep_A Inosine 5'-monophosphat 98.9 1.1E-09 3.8E-14 103.4 5.4 73 72-152 10-84 (404)
16 1gte_A Dihydropyrimidine dehyd 97.9 6E-05 2E-09 78.8 11.3 107 81-193 522-674 (1025)
17 3khj_A Inosine-5-monophosphate 97.4 0.00049 1.7E-08 64.4 9.3 100 73-187 14-124 (361)
18 1f76_A Dihydroorotate dehydrog 97.2 0.00028 9.6E-09 64.5 4.5 88 89-188 42-140 (336)
19 4fo4_A Inosine 5'-monophosphat 96.4 0.009 3.1E-07 56.1 8.6 106 73-188 15-128 (366)
20 2e6f_A Dihydroorotate dehydrog 96.2 0.021 7.1E-07 51.3 9.4 97 90-193 2-135 (314)
21 1ep3_A Dihydroorotate dehydrog 96.1 0.0088 3E-07 53.3 6.5 99 88-193 3-138 (311)
22 1vhn_A Putative flavin oxidore 95.4 0.018 6.1E-07 52.3 5.5 89 100-196 2-99 (318)
23 1wv2_A Thiazole moeity, thiazo 95.3 0.0037 1.3E-07 56.5 0.5 86 152-237 100-207 (265)
24 2z6i_A Trans-2-enoyl-ACP reduc 94.8 0.056 1.9E-06 49.3 7.0 87 94-191 6-99 (332)
25 2gjl_A Hypothetical protein PA 94.7 0.16 5.4E-06 46.0 9.8 89 94-191 9-107 (328)
26 1jub_A Dihydroorotate dehydrog 94.6 0.28 9.6E-06 43.8 11.1 95 92-193 2-133 (311)
27 3tjx_A Dihydroorotate dehydrog 93.8 0.13 4.3E-06 47.3 7.1 42 88-135 33-74 (354)
28 3bw2_A 2-nitropropane dioxygen 92.4 0.57 1.9E-05 43.1 9.4 84 102-191 10-133 (369)
29 3ffs_A Inosine-5-monophosphate 91.1 0.24 8.2E-06 46.9 5.4 69 73-149 11-81 (400)
30 3bo9_A Putative nitroalkan dio 90.2 1.4 4.9E-05 39.9 9.5 83 100-191 24-113 (326)
31 3b0p_A TRNA-dihydrouridine syn 90.1 0.74 2.5E-05 42.3 7.6 86 101-193 2-96 (350)
32 1ea0_A Glutamate synthase [NAD 88.5 0.24 8.3E-06 53.9 3.4 41 100-141 848-888 (1479)
33 4ef8_A Dihydroorotate dehydrog 85.4 6 0.0002 36.6 10.7 107 80-193 25-168 (354)
34 1ofd_A Ferredoxin-dependent gl 80.6 0.87 3E-05 49.8 3.2 41 100-141 865-905 (1520)
35 3oix_A Putative dihydroorotate 80.3 17 0.00059 33.4 11.5 97 90-193 36-168 (345)
36 1z41_A YQJM, probable NADH-dep 61.9 62 0.0021 29.0 10.6 22 93-114 8-29 (338)
37 4af0_A Inosine-5'-monophosphat 61.1 14 0.00046 36.5 6.3 109 73-190 61-178 (556)
38 3glc_A Aldolase LSRF; TIM barr 58.6 51 0.0018 29.6 9.3 65 123-187 193-257 (295)
39 1vyr_A Pentaerythritol tetrani 58.1 74 0.0025 29.0 10.5 45 94-138 9-56 (364)
40 2uva_G Fatty acid synthase bet 56.1 22 0.00074 40.3 7.6 102 79-188 558-674 (2060)
41 3zwt_A Dihydroorotate dehydrog 53.1 12 0.0004 34.7 4.2 44 64-109 24-67 (367)
42 3rjz_A N-type ATP pyrophosphat 52.5 25 0.00086 30.6 6.1 90 98-194 59-153 (237)
43 2gou_A Oxidoreductase, FMN-bin 52.2 77 0.0026 28.9 9.6 45 94-138 9-56 (365)
44 1zfj_A Inosine monophosphate d 51.5 28 0.00095 32.7 6.6 104 73-187 13-127 (491)
45 2cu0_A Inosine-5'-monophosphat 48.7 33 0.0011 32.4 6.7 39 74-112 17-57 (486)
46 3usb_A Inosine-5'-monophosphat 47.2 33 0.0011 32.9 6.5 105 74-189 37-152 (511)
47 3qja_A IGPS, indole-3-glycerol 46.4 22 0.00075 31.5 4.7 60 121-187 127-189 (272)
48 3eb2_A Putative dihydrodipicol 46.1 1E+02 0.0035 27.2 9.2 85 104-189 10-108 (300)
49 2r14_A Morphinone reductase; H 45.1 1.6E+02 0.0056 26.9 10.7 44 93-138 14-60 (377)
50 2jz7_A Selenium binding protei 45.1 19 0.00064 26.7 3.4 27 166-192 34-61 (81)
51 4avf_A Inosine-5'-monophosphat 43.5 31 0.0011 32.9 5.7 68 74-149 12-81 (490)
52 3e96_A Dihydrodipicolinate syn 43.4 86 0.0029 27.9 8.3 83 103-187 16-113 (316)
53 3zen_D Fatty acid synthase; tr 43.0 62 0.0021 38.1 8.8 105 79-191 403-527 (3089)
54 2ehh_A DHDPS, dihydrodipicolin 42.4 1.3E+02 0.0045 26.3 9.3 83 104-188 7-103 (294)
55 3l21_A DHDPS, dihydrodipicolin 42.4 1.5E+02 0.0052 26.2 9.7 85 103-188 20-118 (304)
56 1vr4_A Hypothetical protein AP 41.3 22 0.00074 27.2 3.4 28 166-193 59-87 (103)
57 3flu_A DHDPS, dihydrodipicolin 40.7 1.8E+02 0.0061 25.5 9.9 84 104-188 13-110 (297)
58 3fkr_A L-2-keto-3-deoxyarabona 40.7 1.6E+02 0.0054 26.1 9.6 85 103-188 13-111 (309)
59 2yxg_A DHDPS, dihydrodipicolin 39.8 1.4E+02 0.0048 26.1 9.0 82 104-187 7-102 (289)
60 3qkb_A Uncharacterized protein 39.4 24 0.00083 27.6 3.4 26 166-191 61-87 (111)
61 3m5v_A DHDPS, dihydrodipicolin 39.4 1.2E+02 0.0041 26.7 8.6 82 104-188 14-111 (301)
62 4fxs_A Inosine-5'-monophosphat 39.2 38 0.0013 32.3 5.5 102 74-188 13-127 (496)
63 1vhn_A Putative flavin oxidore 39.1 53 0.0018 29.1 6.1 59 170-238 143-204 (318)
64 1xky_A Dihydrodipicolinate syn 38.8 1.9E+02 0.0066 25.4 9.8 84 104-188 18-115 (301)
65 3qze_A DHDPS, dihydrodipicolin 38.8 1.6E+02 0.0053 26.2 9.3 85 103-188 28-126 (314)
66 1o5k_A DHDPS, dihydrodipicolin 38.4 1.3E+02 0.0045 26.6 8.6 83 104-188 19-115 (306)
67 3na8_A Putative dihydrodipicol 38.1 1.7E+02 0.0059 26.0 9.4 85 103-188 29-127 (315)
68 2r91_A 2-keto-3-deoxy-(6-phosp 37.1 1.1E+02 0.0039 26.6 8.0 82 104-188 5-98 (286)
69 3si9_A DHDPS, dihydrodipicolin 37.0 2.1E+02 0.0072 25.4 9.9 84 104-188 28-125 (315)
70 3dz1_A Dihydrodipicolinate syn 36.9 1.4E+02 0.0047 26.5 8.6 84 103-187 13-109 (313)
71 3s5o_A 4-hydroxy-2-oxoglutarat 36.9 1.6E+02 0.0053 26.1 8.9 82 104-187 20-116 (307)
72 1f6k_A N-acetylneuraminate lya 36.7 2E+02 0.0068 25.1 9.5 84 104-188 9-107 (293)
73 2vc6_A MOSA, dihydrodipicolina 36.7 1.6E+02 0.0056 25.7 9.0 83 104-188 7-103 (292)
74 3ks6_A Glycerophosphoryl diest 36.7 55 0.0019 27.9 5.7 35 120-154 118-154 (250)
75 3a5f_A Dihydrodipicolinate syn 36.6 1.4E+02 0.0048 26.1 8.5 83 104-188 8-104 (291)
76 2q5c_A NTRC family transcripti 36.4 93 0.0032 25.7 6.9 86 94-186 62-148 (196)
77 2v9d_A YAGE; dihydrodipicolini 35.7 2.3E+02 0.0079 25.5 10.0 85 103-188 36-134 (343)
78 2rfg_A Dihydrodipicolinate syn 34.4 1.6E+02 0.0054 25.9 8.5 82 104-187 7-102 (297)
79 1gvf_A Tagatose-bisphosphate a 34.4 35 0.0012 30.6 4.2 68 118-189 28-106 (286)
80 3b4u_A Dihydrodipicolinate syn 34.2 1.8E+02 0.0063 25.4 8.9 83 104-187 9-105 (294)
81 3tak_A DHDPS, dihydrodipicolin 34.0 1.4E+02 0.0048 26.1 8.0 84 104-188 7-104 (291)
82 1y2i_A Hypothetical protein S0 33.4 29 0.00099 27.8 3.1 29 166-194 83-112 (133)
83 4dpp_A DHDPS 2, dihydrodipicol 33.3 2.7E+02 0.0092 25.6 10.1 84 102-187 63-161 (360)
84 3cpr_A Dihydrodipicolinate syn 32.6 2.1E+02 0.0071 25.2 9.0 84 104-188 22-119 (304)
85 1vr6_A Phospho-2-dehydro-3-deo 32.5 80 0.0027 29.1 6.3 31 120-150 158-188 (350)
86 3d0c_A Dihydrodipicolinate syn 32.5 1.9E+02 0.0064 25.7 8.7 82 104-187 17-113 (314)
87 2r8w_A AGR_C_1641P; APC7498, d 31.6 2.3E+02 0.008 25.3 9.2 83 104-187 40-136 (332)
88 2pju_A Propionate catabolism o 31.5 1.2E+02 0.004 26.0 6.9 136 36-185 19-159 (225)
89 1aj0_A DHPS, dihydropteroate s 31.4 2.1E+02 0.007 25.3 8.7 27 166-195 162-190 (282)
90 1jub_A Dihydroorotate dehydrog 31.3 51 0.0017 28.8 4.6 33 155-187 160-192 (311)
91 1vs1_A 3-deoxy-7-phosphoheptul 31.0 97 0.0033 27.4 6.4 34 118-151 88-121 (276)
92 2wkj_A N-acetylneuraminate lya 30.4 2.2E+02 0.0074 25.1 8.7 84 104-188 17-114 (303)
93 2nuw_A 2-keto-3-deoxygluconate 29.6 1.6E+02 0.0054 25.7 7.6 82 104-187 5-98 (288)
94 1tv5_A Dhodehase, dihydroorota 29.4 51 0.0017 31.3 4.5 33 76-109 67-99 (443)
95 2ojp_A DHDPS, dihydrodipicolin 28.6 2E+02 0.0069 25.1 8.1 84 104-188 7-104 (292)
96 2y5s_A DHPS, dihydropteroate s 28.4 1.2E+02 0.0041 27.2 6.6 22 166-187 170-193 (294)
97 2h9a_B CO dehydrogenase/acetyl 27.9 1.1E+02 0.0038 27.5 6.4 85 102-194 122-214 (310)
98 2dqw_A Dihydropteroate synthas 27.8 1.2E+02 0.0042 27.1 6.5 21 167-187 177-197 (294)
99 3daq_A DHDPS, dihydrodipicolin 27.2 2.7E+02 0.0091 24.3 8.7 83 104-188 9-105 (292)
100 1tx2_A DHPS, dihydropteroate s 27.2 1.2E+02 0.0042 27.1 6.5 21 167-187 182-204 (297)
101 1w3i_A EDA, 2-keto-3-deoxy glu 26.8 2E+02 0.0067 25.2 7.7 83 104-188 5-99 (293)
102 3l12_A Putative glycerophospho 26.8 73 0.0025 28.0 4.9 23 169-191 257-279 (313)
103 2uv8_G Fatty acid synthase sub 26.7 1.3E+02 0.0043 34.3 7.6 104 79-190 565-683 (2051)
104 1yd7_A 2-keto acid:ferredoxin 26.6 2E+02 0.007 26.2 8.1 67 118-187 23-94 (395)
105 3i65_A Dihydroorotate dehydrog 26.4 58 0.002 30.8 4.3 33 76-109 69-101 (415)
106 1wdi_A Hypothetical protein TT 26.4 1.4E+02 0.0048 27.6 6.8 71 106-187 180-257 (345)
107 1o66_A 3-methyl-2-oxobutanoate 26.3 78 0.0027 28.3 4.9 22 167-188 158-182 (275)
108 3sz8_A 2-dehydro-3-deoxyphosph 26.3 1.1E+02 0.0037 27.4 5.9 32 119-150 78-109 (285)
109 3viv_A 441AA long hypothetical 26.0 56 0.0019 28.2 3.8 27 167-193 25-51 (230)
110 3qvq_A Phosphodiesterase OLEI0 25.9 73 0.0025 27.1 4.6 23 169-191 199-221 (252)
111 3nvt_A 3-deoxy-D-arabino-heptu 25.8 81 0.0028 29.3 5.2 48 87-137 124-174 (385)
112 3qfe_A Putative dihydrodipicol 25.8 2.7E+02 0.0091 24.7 8.5 84 104-188 16-114 (318)
113 3h5d_A DHDPS, dihydrodipicolin 25.5 3.5E+02 0.012 23.9 9.2 84 104-188 13-111 (311)
114 3lmz_A Putative sugar isomeras 25.2 1.9E+02 0.0064 23.8 7.0 84 100-187 15-109 (257)
115 4djd_D C/Fe-SP, corrinoid/iron 24.8 1.2E+02 0.0041 27.6 6.0 88 101-196 128-223 (323)
116 1ps9_A 2,4-dienoyl-COA reducta 24.5 4.1E+02 0.014 25.6 10.2 20 93-112 8-27 (671)
117 1vrd_A Inosine-5'-monophosphat 24.3 1.1E+02 0.0038 28.6 5.9 58 74-137 19-78 (494)
118 3q94_A Fructose-bisphosphate a 24.2 50 0.0017 29.7 3.2 67 119-189 32-112 (288)
119 1x60_A Sporulation-specific N- 24.1 1.7E+02 0.006 19.9 6.0 34 154-187 8-41 (79)
120 2yxo_A Histidinol phosphatase; 24.0 54 0.0018 27.4 3.3 24 169-192 18-41 (267)
121 3h4q_A Putative acetyltransfer 23.8 90 0.0031 23.6 4.4 40 166-205 122-161 (188)
122 1m65_A Hypothetical protein YC 23.6 50 0.0017 27.3 3.0 21 169-189 20-40 (245)
123 1zco_A 2-dehydro-3-deoxyphosph 23.4 1.3E+02 0.0043 26.3 5.7 34 118-151 73-106 (262)
124 2e6f_A Dihydroorotate dehydrog 23.3 92 0.0031 27.2 4.8 40 148-187 155-195 (314)
125 3pm6_A Putative fructose-bisph 23.3 67 0.0023 29.2 3.9 67 118-188 37-121 (306)
126 2oog_A Glycerophosphoryl diest 23.1 71 0.0024 27.7 4.0 41 121-161 150-199 (287)
127 1ur4_A Galactanase; hydrolase, 22.6 1.5E+02 0.0051 27.6 6.3 82 103-185 10-107 (399)
128 1z4e_A Transcriptional regulat 22.4 89 0.003 22.8 4.0 40 166-205 104-143 (153)
129 1nh8_A ATP phosphoribosyltrans 22.4 1.6E+02 0.0055 26.7 6.3 59 129-187 228-297 (304)
130 3jvn_A Acetyltransferase; alph 22.3 79 0.0027 23.1 3.6 40 166-205 107-146 (166)
131 1oy0_A Ketopantoate hydroxymet 22.2 1.2E+02 0.004 27.2 5.3 21 168-188 177-200 (281)
132 3mz2_A Glycerophosphoryl diest 21.8 1.9E+02 0.0066 25.3 6.6 28 164-191 212-239 (292)
133 4ef8_A Dihydroorotate dehydrog 21.8 37 0.0012 31.3 1.9 33 154-186 194-227 (354)
134 3t9y_A Acetyltransferase, GNAT 21.6 92 0.0031 22.2 3.8 40 166-205 99-140 (150)
135 1o94_A Tmadh, trimethylamine d 21.2 5.3E+02 0.018 25.2 10.4 20 93-112 12-31 (729)
136 1yy3_A S-adenosylmethionine:tR 21.0 1.6E+02 0.0053 27.3 5.9 110 66-187 141-257 (346)
137 2isw_A Putative fructose-1,6-b 20.9 71 0.0024 29.2 3.6 68 118-188 28-106 (323)
138 1f76_A Dihydroorotate dehydrog 20.5 1.4E+02 0.0046 26.4 5.4 34 155-188 213-246 (336)
139 2yci_X 5-methyltetrahydrofolat 20.1 1.9E+02 0.0065 25.3 6.2 25 166-190 146-172 (271)
140 1me8_A Inosine-5'-monophosphat 20.1 1.6E+02 0.0054 27.9 6.1 38 74-111 12-60 (503)
141 3n9r_A Fructose-bisphosphate a 20.0 61 0.0021 29.5 2.9 19 120-138 29-47 (307)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=6.7e-57 Score=423.80 Aligned_cols=203 Identities=42% Similarity=0.576 Sum_probs=186.3
Q ss_pred CCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeeccccccc
Q 024846 35 PVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHK 114 (261)
Q Consensus 35 ~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~~~ 114 (261)
++|++|||+.||++||+.+|+|++||++||.|+++|++||++|+|+||+|+||+++||+|+|||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 024846 115 LANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (261)
Q Consensus 115 l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (261)
|+||+||.++||||+++||+|++|+.+++|+|||+++.+ ++.|||||+++|++.++++|+||+++||+||+||||+|++
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999987 7899999999999999999999999999999999999999
Q ss_pred CCchhHhhcCCCCC---Ccccccccc--------------------------c-cccccccccccCcccch-hhh
Q 024846 194 GRREADIKNKMITP---PLKNLEGLL--------------------------S-TKVSSVRILKLMPRDHG-CFF 237 (261)
Q Consensus 194 G~Rerd~r~~f~~P---~~~~l~~~~--------------------------~-~~~~~~~k~~m~~~d~~-~~~ 237 (261)
|+|++|+||+|.+| +++++.... . -+++.+.|++++++|+. |.+
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~ 236 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMK 236 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHH
Confidence 99999999999888 445542110 0 14556678888888877 443
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=6.8e-47 Score=359.88 Aligned_cols=176 Identities=43% Similarity=0.715 Sum_probs=170.0
Q ss_pred CCCCCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeecccc
Q 024846 32 AAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTA 111 (261)
Q Consensus 32 ~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g 111 (261)
+..++|++|||+.||++||+.+|+|++||+++|.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||
T Consensus 24 ~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg 103 (392)
T 2nzl_A 24 LPRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATA 103 (392)
T ss_dssp --CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCS
T ss_pred cccCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 024846 112 LHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (261)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (261)
++++.||++|.+++++|+++|+++++|++++.++|+|++..+ ++.|||||+++|++.+.++++||+++||++|+||+|+
T Consensus 104 ~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~ 183 (392)
T 2nzl_A 104 MQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDT 183 (392)
T ss_dssp CGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSC
T ss_pred ccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 999999999999999999999999999999999999998764 7899999999999999999999999999999999999
Q ss_pred CCCCCchhHhhcCCCCC
Q 024846 191 PRLGRREADIKNKMITP 207 (261)
Q Consensus 191 p~~G~Rerd~r~~f~~P 207 (261)
|+.|+|++|+|++|.+|
T Consensus 184 p~~g~R~~d~r~~~~lp 200 (392)
T 2nzl_A 184 PYLGNRLDDVRNRFKLP 200 (392)
T ss_dssp SSCCCCHHHHHHTCCCC
T ss_pred CCccchhHhHhhccCCc
Confidence 99999999999999888
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=1.4e-46 Score=354.91 Aligned_cols=179 Identities=35% Similarity=0.508 Sum_probs=161.6
Q ss_pred CcCCCCCCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeec
Q 024846 29 FQMAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIA 108 (261)
Q Consensus 29 ~~~~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iA 108 (261)
.|.+..++|++|||+.||++||+.+|+|++||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+||
T Consensus 7 ~~~~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iA 86 (368)
T 2nli_A 7 EIKYIDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMA 86 (368)
T ss_dssp CCCCCCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEEC
T ss_pred chhhccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeec
Confidence 34456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 109 PTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 109 P~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
|||++++.||+||.+++++|+++|+++++|++++.++|++++..+ ++.|||||+++|++.+.++++||+++||++|+||
T Consensus 87 Pma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it 166 (368)
T 2nli_A 87 PIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILT 166 (368)
T ss_dssp CCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEE
T ss_pred chhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 999999999999999999999999999999999999999988764 7899999999999999999999999999999999
Q ss_pred ecCCCCCCchhHhhcCCCCC
Q 024846 188 ADTPRLGRREADIKNKMITP 207 (261)
Q Consensus 188 VD~p~~G~Rerd~r~~f~~P 207 (261)
+|+|+.|+|++|+|++|.+|
T Consensus 167 ~d~p~~g~r~~d~~~~~~~p 186 (368)
T 2nli_A 167 ADSTVSGNRDRDVKNKFVYP 186 (368)
T ss_dssp SBCC---CBC--------CC
T ss_pred CCCCcccchhHHHhhcccCc
Confidence 99999999999999999877
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=5e-45 Score=343.80 Aligned_cols=174 Identities=62% Similarity=0.981 Sum_probs=169.9
Q ss_pred CCCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeecccccc
Q 024846 34 EPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALH 113 (261)
Q Consensus 34 ~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~~ 113 (261)
.++|++|||+.||++||+.+|+|++||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||++||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 024846 114 KLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (261)
Q Consensus 114 ~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (261)
.+.||+||.+++++|+++|+++++|++++.++|+|+++.+++.|||||+++|++...+++++++++|+++|+||+|+|+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999988778899999999999999999999999999999999999999
Q ss_pred CCchhHhhcCCCCC
Q 024846 194 GRREADIKNKMITP 207 (261)
Q Consensus 194 G~Rerd~r~~f~~P 207 (261)
|+|++|+|++|.+|
T Consensus 163 g~r~~d~r~~~~~p 176 (370)
T 1gox_A 163 GRREADIKNRFVLP 176 (370)
T ss_dssp CCCHHHHHTTCCCC
T ss_pred cccHHHHHhccCCC
Confidence 99999999999877
No 5
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=3.7e-44 Score=339.30 Aligned_cols=174 Identities=41% Similarity=0.675 Sum_probs=167.7
Q ss_pred CCCCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeeccccc
Q 024846 33 AEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAL 112 (261)
Q Consensus 33 ~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~ 112 (261)
.+++|++|||+.||++||+.+|+|++||+++|.|+++|+.+|++|+|+||+|+|++++||+|+|||+++++||++||||+
T Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~ 82 (380)
T 1p4c_A 3 QNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGL 82 (380)
T ss_dssp -CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred CcCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCccc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 024846 113 HKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPR 192 (261)
Q Consensus 113 ~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (261)
+++.||++|.+++++|+++|+++++|+.++.++|+|++..+++.|||||+++ ++...++++||+++|+++++||||+|+
T Consensus 83 ~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~ 161 (380)
T 1p4c_A 83 NGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAV 161 (380)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred cccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCcc
Confidence 9999999999999999999999999999999999998875678999999999 999999999999999999999999999
Q ss_pred CCCchhHhhcCCCCC
Q 024846 193 LGRREADIKNKMITP 207 (261)
Q Consensus 193 ~G~Rerd~r~~f~~P 207 (261)
.|+|++|+|+++..|
T Consensus 162 ~g~r~~d~~~g~~~~ 176 (380)
T 1p4c_A 162 NGYRERDLHNRFKIP 176 (380)
T ss_dssp CCCCHHHHHHTCCCC
T ss_pred ccchhHHHhcCCCCc
Confidence 999999999999766
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=2.1e-43 Score=345.75 Aligned_cols=179 Identities=40% Similarity=0.645 Sum_probs=171.3
Q ss_pred CcCCCCCCCHHHHHHHHHhhCChhhhhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeec
Q 024846 29 FQMAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIA 108 (261)
Q Consensus 29 ~~~~~~~~~l~D~e~~Ar~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iA 108 (261)
.|.+..++|++|||+.||++||+.+|+|+.||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+||
T Consensus 116 ~p~~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iA 195 (511)
T 1kbi_A 116 LPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVS 195 (511)
T ss_dssp CCCGGGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEEC
T ss_pred CCCccccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEec
Confidence 34455789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCc-hhhHHHHHHHHh--cCCceeecCCCCCcHHHHHhhc---CCceeEEEeeecCHHHHHHHHHHHHHcCCc
Q 024846 109 PTALHKLANP-EGEVATARAAAS--CNTIMVLSFTSSSSIEEVAASC---NAVRFYQLYVFKKRDIAATLVQRAERNGFK 182 (261)
Q Consensus 109 P~g~~~l~hp-~gE~alArAA~~--~Gi~~~lSs~ss~sleeIa~~~---~~~~wfQLy~~~dr~~~~~li~rAe~aG~~ 182 (261)
||++++++|| ++|.+++++|++ +|+++++|++++.++|+|++.. .++.|||||+.+|++.+.++++||+++||+
T Consensus 196 Pma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~ 275 (511)
T 1kbi_A 196 ATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVK 275 (511)
T ss_dssp CCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCC
Confidence 9999999999 999999999999 9999999999999999998876 268999999999999999999999999999
Q ss_pred EEEEeecCCCCCCchhHhhcCCCCC
Q 024846 183 ALVLTADTPRLGRREADIKNKMITP 207 (261)
Q Consensus 183 AlvvTVD~p~~G~Rerd~r~~f~~P 207 (261)
+|+||||+|++|+|++++|++|..|
T Consensus 276 al~itvd~p~~g~R~~~~r~g~~~p 300 (511)
T 1kbi_A 276 ALFVTVDAPSLGQREKDMKLKFSNT 300 (511)
T ss_dssp CEEEECSCSSCCCCHHHHHHHHTTC
T ss_pred EEEEeCCCCCccccHHHHhccCCCC
Confidence 9999999999999999999998777
No 7
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=7.8e-22 Score=186.11 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=114.0
Q ss_pred HhhCChhhhhhhcCCccchhcHHHHHHHhhccccccc-cccCCCCCCcceeeCCcccCcceeeccccccccCCchhhHHH
Q 024846 46 RLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPR-ILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVAT 124 (261)
Q Consensus 46 r~~Lp~~~~~Y~~gGa~de~T~~~N~~Af~ri~L~pR-vL~dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~al 124 (261)
..+||+..|+|+.+|++++ ++|..+|++|+|+|| ++++++++|++|+|+|++++.||++|||+ ++.|+ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HH
Confidence 3578999999999999999 358899999999998 99999999999999999999999999998 45566 59
Q ss_pred HHHHHhcCCceeecC--------CCCCcHHHHHhhcC-------CceeEEEeeec-CHHHHHHHHHHHHHcCCcEEE
Q 024846 125 ARAAASCNTIMVLSF--------TSSSSIEEVAASCN-------AVRFYQLYVFK-KRDIAATLVQRAERNGFKALV 185 (261)
Q Consensus 125 ArAA~~~Gi~~~lSs--------~ss~sleeIa~~~~-------~~~wfQLy~~~-dr~~~~~li~rAe~aG~~Alv 185 (261)
|++++++|.++++++ .++.++|+|++... ...|||+|+.+ |++...+++++++++|+.+++
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~ 160 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV 160 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE
Confidence 999999999999998 45567888876542 45699999655 999999999999999998776
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.67 E-value=4e-18 Score=157.61 Aligned_cols=126 Identities=22% Similarity=0.304 Sum_probs=86.9
Q ss_pred hhhhcCCccchhcHHHHHHHhhcccccccccc--CCCCCCcceeeCCcccCcceeeccccccccCCchhh---HHHHHHH
Q 024846 54 YDFYAGGAEDEHTLKENVEAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGE---VATARAA 128 (261)
Q Consensus 54 ~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~--dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE---~alArAA 128 (261)
.+|+..+++++.|+++|+.+|++|+|+||+|+ +++++||+|+|||++++.||++|||++ .|+.+| .+++++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g---~~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTG---GEENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEecccc---CCcchhHHHHHHHHHH
Confidence 48999999999999999999999999999999 889999999999999999999999875 366665 8999999
Q ss_pred HhcCCceeecCCCCCcHHHHHhhcCCceeEEEeeecCHH-------------H----HHHHHHHHHHcCCcEEEEeecC
Q 024846 129 ASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRD-------------I----AATLVQRAERNGFKALVLTADT 190 (261)
Q Consensus 129 ~~~Gi~~~lSs~ss~sleeIa~~~~~~~wfQLy~~~dr~-------------~----~~~li~rAe~aG~~AlvvTVD~ 190 (261)
+++|+++++|++++. +|+. +...|||+ ++++ . .....+.++.+|++++.++++.
T Consensus 85 ~~~G~~~~~~~~~~~-le~~----~~~~~~ql---~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~ 155 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERP----EALRSFRV---RKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNP 155 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCT----TTHHHHCC---TTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCH
T ss_pred HHcCCCEEeCCchhc-ccCC----CccceEEe---eccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccch
Confidence 999999999999874 6642 23457775 2210 0 1333444466789999999874
No 9
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.56 E-value=2.6e-15 Score=141.65 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=97.9
Q ss_pred HHhhcccccccccc--CCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHH--
Q 024846 72 EAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEE-- 147 (261)
Q Consensus 72 ~Af~ri~L~pRvL~--dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~slee-- 147 (261)
.+|++|+|+|+.|+ +++++||+|+|||+++++||+|+||++....+++++.++|++|+++|++|++|+++. .+|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~-~le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYST-ALKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccc-cccCcc
Confidence 58999999999995 788999999999999999999999988888888999999999999999999999874 3443
Q ss_pred -----HHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC----Cc----cccc
Q 024846 148 -----VAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP----PL----KNLE 213 (261)
Q Consensus 148 -----Ia~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~~P----~~----~~l~ 213 (261)
|.+..| .+.+-.|-.... .++..+.++.+|+.||.+++|... |. ..| .. ..++
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~---~e~~~~~ve~~~adal~ihln~~q----e~------~~p~Gd~~~~~~~~~I~ 199 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKP---YQAGLQAVRDLQPLFLQVHINLMQ----EL------LMPEGEREFRSWKKHLS 199 (365)
T ss_dssp ------------CCEEEEEETTSC---HHHHHHHHHHHCCSCEEEEECHHH----HH------TSSSSCCCCHHHHHHHH
T ss_pred ccceEehhhCCCCcEEEEeCCCCC---HHHHHHHHHhcCCCEEEEeccccc----cc------cCCCCCCcHHHHHHHHH
Confidence 222223 222222221111 235566668899999999999632 11 122 12 1222
Q ss_pred ccccc-ccccccccc---cCcccch-hh
Q 024846 214 GLLST-KVSSVRILK---LMPRDHG-CF 236 (261)
Q Consensus 214 ~~~~~-~~~~~~k~~---m~~~d~~-~~ 236 (261)
.+... ++|.+.|++ ++++++. |.
T Consensus 200 ~l~~~~~~PVivK~vg~g~s~e~A~~l~ 227 (365)
T 3sr7_A 200 DYAKKLQLPFILKEVGFGMDVKTIQTAI 227 (365)
T ss_dssp HHHHHCCSCEEEEECSSCCCHHHHHHHH
T ss_pred HHHHhhCCCEEEEECCCCCCHHHHHHHH
Confidence 22222 677788887 8999887 44
No 10
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.49 E-value=3e-14 Score=134.33 Aligned_cols=110 Identities=14% Similarity=0.100 Sum_probs=96.9
Q ss_pred HhhccccccccccCCC--CCC--cceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH
Q 024846 73 AFHRITFRPRILVDVS--RID--LSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV 148 (261)
Q Consensus 73 Af~ri~L~pRvL~dv~--~~D--tsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI 148 (261)
+|++|.|+||++++++ ++| ++|+|+|+++..||++||| |+.+|..+|+|++++|.++++++. .++|++
T Consensus 9 ~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee~ 80 (361)
T 3r2g_A 9 TFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEEN 80 (361)
T ss_dssp CGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHHH
T ss_pred ccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHHH
Confidence 6999999999999988 766 5559999999999999997 677899999999999999999964 789999
Q ss_pred HhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 024846 149 AASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPR 192 (261)
Q Consensus 149 a~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (261)
++......|+|.|...+++...++++++.++|++ +|+||++.
T Consensus 81 ~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~ 122 (361)
T 3r2g_A 81 IQEFKKCKGPVFVSVGCTENELQRAEALRDAGAD--FFCVDVAH 122 (361)
T ss_dssp HHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC
T ss_pred HHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC
Confidence 9877666799999988888899999999999999 56666654
No 11
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.48 E-value=4.2e-14 Score=131.16 Aligned_cols=119 Identities=21% Similarity=0.178 Sum_probs=92.7
Q ss_pred HHHHhhcccccccccc--CCCCCCcceeeCCcccCcceeeccc-cccccCCchhhHHHHHHHHhcCCceeecCCCCCcHH
Q 024846 70 NVEAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPT-ALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIE 146 (261)
Q Consensus 70 N~~Af~ri~L~pRvL~--dv~~~DtsttllG~~ls~Pi~iAP~-g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sle 146 (261)
+..+|++|+|+||+|+ +++++|++|+|||++++.||++||| |+++..++++|.+++++|++.|+++++|++++. ++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3678999999999999 7789999999999999999999997 555234577799999999999999999998764 43
Q ss_pred H---------HHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCC
Q 024846 147 E---------VAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPR 192 (261)
Q Consensus 147 e---------Ia~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~ 192 (261)
+ +....+ .+.+.|+....+.+. +.+.++.+|+.+|.+++++|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~ 152 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQ 152 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTT
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchh
Confidence 3 232333 456777764334433 334467789999999999874
No 12
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.25 E-value=7.5e-12 Score=118.06 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=83.8
Q ss_pred HHhhcccccccccc--CCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCC-------
Q 024846 72 EAFHRITFRPRILV--DVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSS------- 142 (261)
Q Consensus 72 ~Af~ri~L~pRvL~--dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss------- 142 (261)
+.|++|+|+|+.|+ +++++||+|+|||++++.||++|||++......+.+..++++|+++|+++++|+++.
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 46999999999999 789999999999999999999999866433233567899999999999999999842
Q ss_pred -CcHHHHHhhcC-CceeEEEee----e-cCHHHHHHHHHHHHHcCCcEEEEeecC
Q 024846 143 -SSIEEVAASCN-AVRFYQLYV----F-KKRDIAATLVQRAERNGFKALVLTADT 190 (261)
Q Consensus 143 -~sleeIa~~~~-~~~wfQLy~----~-~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (261)
.+.+-+.+.+| .+.+-.+.. . ++.+.. .+.++.+++.|+.|+++.
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~---~~av~~~~a~al~Ihln~ 158 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEF---QDAIQMIEADAIAVHLNP 158 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHH---HHHHHHTTCSEEEEECCH
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHH---HHHHHHhcCCCeEEEecc
Confidence 12222444455 323323332 2 333332 233455689999999873
No 13
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.08 E-value=1.4e-11 Score=114.27 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=71.8
Q ss_pred hcHHHHHHHhhcccccccc--ccCCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHH-HHhcCCceeecCCC
Q 024846 65 HTLKENVEAFHRITFRPRI--LVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARA-AASCNTIMVLSFTS 141 (261)
Q Consensus 65 ~T~~~N~~Af~ri~L~pRv--L~dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArA-A~~~Gi~~~lSs~s 141 (261)
+-..+|..+|++|+|+||+ +++++++||+|+|+|++++.||++||+++.. +..++++ ++..|+.+......
T Consensus 7 ~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~ 80 (336)
T 1ypf_A 7 HHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQP 80 (336)
T ss_dssp -----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSG
T ss_pred cccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCC
Confidence 3456899999999999999 6799999999999999999999999987643 2445554 44445555544433
Q ss_pred CCcHHH-HHhhc-CC-ceeEEEeeecCHHHHHHHHHHHHHcC--CcEEEEee
Q 024846 142 SSSIEE-VAASC-NA-VRFYQLYVFKKRDIAATLVQRAERNG--FKALVLTA 188 (261)
Q Consensus 142 s~slee-Ia~~~-~~-~~wfQLy~~~dr~~~~~li~rAe~aG--~~AlvvTV 188 (261)
+ ..++ |.... .+ +.-.|+ ..+.+ ..+.++++.++| +.+|.++.
T Consensus 81 ~-~~~~~i~~~~~~g~~v~v~~--g~~~~-~~~~a~~~~~~g~~~~~i~i~~ 128 (336)
T 1ypf_A 81 E-KRISFIRDMQSRGLIASISV--GVKED-EYEFVQQLAAEHLTPEYITIDI 128 (336)
T ss_dssp G-GHHHHHHHHHHTTCCCEEEE--CCSHH-HHHHHHHHHHTTCCCSEEEEEC
T ss_pred H-HHHHHHHHHHhcCCeEEEeC--CCCHH-HHHHHHHHHhcCCCCCEEEEEC
Confidence 2 2333 33221 22 223342 33333 335577788888 77776544
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.01 E-value=1.8e-10 Score=107.78 Aligned_cols=151 Identities=12% Similarity=0.081 Sum_probs=95.3
Q ss_pred cHHHHHHHhhcccccccccc-CC-CCCCcceeeC-----CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeec
Q 024846 66 TLKENVEAFHRITFRPRILV-DV-SRIDLSTTIL-----DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS 138 (261)
Q Consensus 66 T~~~N~~Af~ri~L~pRvL~-dv-~~~Dtsttll-----G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lS 138 (261)
-.++|..+|++|.|+||.+. ++ +++||+|+|+ |.+++.||++|||++ .+|.++|+|+.++|.+.+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEc
Confidence 35789999999999999987 68 7999999999 999999999999874 35789999999999888887
Q ss_pred CCCCCcHHHHHhhcC-CceeE-EEee--ecCHHHHHHHHHHHHHc--CCcEEEEeecCCCCCCchhHhhcCCCCCCcccc
Q 024846 139 FTSSSSIEEVAASCN-AVRFY-QLYV--FKKRDIAATLVQRAERN--GFKALVLTADTPRLGRREADIKNKMITPPLKNL 212 (261)
Q Consensus 139 s~ss~sleeIa~~~~-~~~wf-QLy~--~~dr~~~~~li~rAe~a--G~~AlvvTVD~p~~G~Rerd~r~~f~~P~~~~l 212 (261)
. +.++|++.+... .+.++ .+.. ....+. .+.++...+. |+.++.+++.. |.... ....+
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~g~~~~~-~~~~~~l~~~~~g~~~i~i~~~~---g~~~~---------~~~~i 152 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASSGTGSSD-FEQLEQILEAIPQVKYICLDVAN---GYSEH---------FVEFV 152 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEECSSHHH-HHHHHHHHHHCTTCCEEEEECSC---TTBHH---------HHHHH
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeecCCChHH-HHHHHHHHhccCCCCEEEEEecC---CCcHH---------HHHHH
Confidence 5 567888765431 11111 1111 112222 2344444444 89988877642 22110 11122
Q ss_pred cccccc--ccccccccccCcccch-hhh
Q 024846 213 EGLLST--KVSSVRILKLMPRDHG-CFF 237 (261)
Q Consensus 213 ~~~~~~--~~~~~~k~~m~~~d~~-~~~ 237 (261)
+.+... +++.+.++++|++|+. +.+
T Consensus 153 ~~lr~~~~~~~vi~g~v~t~e~A~~a~~ 180 (351)
T 2c6q_A 153 KDVRKRFPQHTIMAGNVVTGEMVEELIL 180 (351)
T ss_dssp HHHHHHCTTSEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEeCCCHHHHHHHHH
Confidence 222211 3455567788888877 443
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.88 E-value=1.1e-09 Score=103.44 Aligned_cols=73 Identities=21% Similarity=0.265 Sum_probs=58.9
Q ss_pred HHhhcccccccccc-CCCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH
Q 024846 72 EAFHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (261)
Q Consensus 72 ~Af~ri~L~pRvL~-dv~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa 149 (261)
.+|++|+|+||++. +++++|++|+|+ |.+++.||++|||++ +.++|.+.+ +.++|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHH
Confidence 46999999999998 889999999999 999999999999986 455666554 66667666666 456788876
Q ss_pred hhc
Q 024846 150 ASC 152 (261)
Q Consensus 150 ~~~ 152 (261)
+..
T Consensus 82 ~~~ 84 (404)
T 1eep_A 82 KEI 84 (404)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 16
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.87 E-value=6e-05 Score=78.81 Aligned_cols=107 Identities=21% Similarity=0.207 Sum_probs=80.0
Q ss_pred cccccCCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceee-cCCCC-----------------
Q 024846 81 PRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFTSS----------------- 142 (261)
Q Consensus 81 pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l-Ss~ss----------------- 142 (261)
|..-..+.++|++++++|.+++.||++||+++. .+...++++...|..+++ +|.+.
T Consensus 522 p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~ 595 (1025)
T 1gte_A 522 PLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTT 595 (1025)
T ss_dssp CCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCT
T ss_pred cccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccc
Confidence 333335678899999999999999999997653 344556677777877776 11110
Q ss_pred --------------------Cc-------HHHHHhhcC-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 024846 143 --------------------SS-------IEEVAASCN-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTADTPRL 193 (261)
Q Consensus 143 --------------------~s-------leeIa~~~~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (261)
.+ ++++.+..+ .+.|++++...+.+...+.+++++++|+.+|.|++.+|..
T Consensus 596 ~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~ 674 (1025)
T 1gte_A 596 SGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG 674 (1025)
T ss_dssp TCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 11 234455454 6789999888889999999999999999999999999875
No 17
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.41 E-value=0.00049 Score=64.40 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=65.3
Q ss_pred HhhccccccccccCC--CCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHH-hcCCceeecCCCCCcHHHH
Q 024846 73 AFHRITFRPRILVDV--SRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAA-SCNTIMVLSFTSSSSIEEV 148 (261)
Q Consensus 73 Af~ri~L~pRvL~dv--~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~-~~Gi~~~lSs~ss~sleeI 148 (261)
.|++|.|+|. +.++ +++|++|+|. +..+..||+.|||.+.. +..+|.+.+ +-|+.++-. +.+.+++
T Consensus 14 ~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~---~~s~e~~ 83 (361)
T 3khj_A 14 TFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK---NMDMESQ 83 (361)
T ss_dssp CGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS---SSCHHHH
T ss_pred CcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec---CCCHHHH
Confidence 4999999998 6654 5689999998 78999999999987542 446776544 445555543 3344443
Q ss_pred ----Hhhc--C-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 149 ----AASC--N-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 149 ----a~~~--~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
.+.. + .+....+... + .+.++.+.++|+..|+|+
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~-~----~e~a~~l~eaGad~I~ld 124 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVN-E----IERAKLLVEAGVDVIVLD 124 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTT-C----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhccCceEEEEeCCC-H----HHHHHHHHHcCcCeEEEe
Confidence 2221 2 2233344332 2 677888889999976553
No 18
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.16 E-value=0.00028 Score=64.49 Aligned_cols=88 Identities=13% Similarity=0.188 Sum_probs=55.8
Q ss_pred CCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceee-cCCCCCcHHHHHhhcCCceeEEEee----e
Q 024846 89 RIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFTSSSSIEEVAASCNAVRFYQLYV----F 163 (261)
Q Consensus 89 ~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l-Ss~ss~sleeIa~~~~~~~wfQLy~----~ 163 (261)
.+|++++++|.++..||++|+ |. +.++| .++++++.|+.+++ ++.+ ++.. ...+.++|||+|- .
T Consensus 42 ~~~l~~~i~g~~l~npi~~aa-g~----~~~~~--~~~~~a~~G~g~i~~~~~~---~~~~-~g~~~pr~~~~~~d~~~i 110 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAA-GL----DKDGE--CIDALGAMGFGSIEIGTVT---PRPQ-PGNDKPRLFRLVDAEGLI 110 (336)
T ss_dssp CCCCCEEETTEEESSSEEECT-TS----STTCC--CHHHHHHTTCSEEEEEEEC---SSCB-CCSCSCCEEEETTTTEEE
T ss_pred CCCCCeEECCEEcCCCcEeCc-cc----CCcHH--HHHHHHHcCccEEEeCCCC---CCCC-CCCCCcceeeccccceee
Confidence 489999999999999999995 32 45555 77788899998754 3333 2221 1124567888871 0
Q ss_pred -----cCHHHHHHHHHHHHHcCCc-EEEEee
Q 024846 164 -----KKRDIAATLVQRAERNGFK-ALVLTA 188 (261)
Q Consensus 164 -----~dr~~~~~li~rAe~aG~~-AlvvTV 188 (261)
.+.+ .+++++++++++++ .+++++
T Consensus 111 n~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i 140 (336)
T 1f76_A 111 NRMGFNNLG-VDNLVENVKKAHYDGVLGINI 140 (336)
T ss_dssp ECCCCCBCC-HHHHHHHHHHCCCCSEEEEEE
T ss_pred ecCCCCCcC-HHHHHHHHHhcccCCcEEEEe
Confidence 0111 24555666665544 566666
No 19
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.43 E-value=0.009 Score=56.06 Aligned_cols=106 Identities=21% Similarity=0.162 Sum_probs=65.8
Q ss_pred HhhccccccccccCC--CCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH
Q 024846 73 AFHRITFRPRILVDV--SRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (261)
Q Consensus 73 Af~ri~L~pRvL~dv--~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa 149 (261)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.|||.... +..+|.+.+++|-..++.. +.+.|+..
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 4899999997 4543 4689999998 68899999999987432 4567766666655555543 24455533
Q ss_pred hhc----C-CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEee
Q 024846 150 ASC----N-AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 150 ~~~----~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (261)
+.. . +..-..+-.... ....+.++.+.++|+..|+|+.
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~-~~~~~~~~~lieaGvd~I~idt 128 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAA-PGNEERVKALVEAGVDVLLIDS 128 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSC-TTCHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhcCceeEEEEeccC-hhHHHHHHHHHhCCCCEEEEeC
Confidence 221 1 111111211111 1245678888899999877653
No 20
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.20 E-value=0.021 Score=51.33 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=66.1
Q ss_pred CCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeec-CCC--------------------------C
Q 024846 90 IDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS-FTS--------------------------S 142 (261)
Q Consensus 90 ~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lS-s~s--------------------------s 142 (261)
+|++++++|.+++.||++||.. .+.++|. .+.+.+.|+.+++. +.+ +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~----~~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGV----LCSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTS----SCSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCC----CCCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 5899999999999999999732 1223333 56678888887543 221 1
Q ss_pred CcHH----HHHhh-c-C-CceeEEEeeecCHHHHHHHHHHHHHcCCc---EEEEeecCCCC
Q 024846 143 SSIE----EVAAS-C-N-AVRFYQLYVFKKRDIAATLVQRAERNGFK---ALVLTADTPRL 193 (261)
Q Consensus 143 ~sle----eIa~~-~-~-~~~wfQLy~~~dr~~~~~li~rAe~aG~~---AlvvTVD~p~~ 193 (261)
..++ .+... . + .+...|+. -.+.+...+.+++++++|+. +|-+++-+|..
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~ 135 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV 135 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC
Confidence 2233 33332 1 2 34566765 34667788899999999999 89999988876
No 21
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.12 E-value=0.0088 Score=53.30 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=62.1
Q ss_pred CCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHH--HhcCCcee-----------------------ecCC--
Q 024846 88 SRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAA--ASCNTIMV-----------------------LSFT-- 140 (261)
Q Consensus 88 ~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA--~~~Gi~~~-----------------------lSs~-- 140 (261)
+++|++++|+|.++..||++|| |+.+... + ..+.+ ...|...+ +++.
T Consensus 3 ~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~--~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~ 76 (311)
T 1ep3_A 3 ENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---E--YAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGL 76 (311)
T ss_dssp CCTTTCEEETTEEESSSEEECT-TSSTTST---T--GGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCC
T ss_pred CCCccceEECCEECCCCcEECC-CCCCCCH---H--HHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCC
Confidence 6789999999999999999999 3333211 1 12332 34453321 1221
Q ss_pred CCCcHHHH--------Hhhc-CCceeEEEeeecCHHHHHHHHHHHHH-cCCcEEEEeecCCCC
Q 024846 141 SSSSIEEV--------AASC-NAVRFYQLYVFKKRDIAATLVQRAER-NGFKALVLTADTPRL 193 (261)
Q Consensus 141 ss~sleeI--------a~~~-~~~~wfQLy~~~dr~~~~~li~rAe~-aG~~AlvvTVD~p~~ 193 (261)
.+.+.+++ .+.. ..+.+.||.-. +.+...+..+++++ +|+.+|-+++.+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d~iei~~~~p~~ 138 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNENFPELPIIANVAGS-EEADYVAVCAKIGDAANVKAIELNISCPNV 138 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHHCTTSCEEEEECCS-SHHHHHHHHHHHTTSTTEEEEEEECCSEEG
T ss_pred CCcCHHHHHHHHHHHHHhcCCCCcEEEEEcCC-CHHHHHHHHHHHhccCCCCEEEEeCCCCCC
Confidence 12333332 2213 35667888643 46667788888888 999999999987763
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.40 E-value=0.018 Score=52.31 Aligned_cols=89 Identities=15% Similarity=0.060 Sum_probs=61.3
Q ss_pred ccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCC---------cHHHHHhhcCCceeEEEeeecCHHHHH
Q 024846 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSS---------SIEEVAASCNAVRFYQLYVFKKRDIAA 170 (261)
Q Consensus 100 ~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~---------sleeIa~~~~~~~wfQLy~~~dr~~~~ 170 (261)
++..||++|||++.. +....+.+++.|..++++.+.+. .++.+....+.+.|+||+ -.+.+...
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 467899999987432 35677777777877776654321 122330112367899999 66788888
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCc
Q 024846 171 TLVQRAERNGFKALVLTADTPRLGRR 196 (261)
Q Consensus 171 ~li~rAe~aG~~AlvvTVD~p~~G~R 196 (261)
+..++|+++ |.+|-|++.+|....|
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r 99 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVV 99 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcC
Confidence 999999999 9999999999885443
No 23
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=95.26 E-value=0.0037 Score=56.48 Aligned_cols=86 Identities=22% Similarity=0.265 Sum_probs=61.9
Q ss_pred cCCceeEEEeee-------cCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC--Cc-------cc---c
Q 024846 152 CNAVRFYQLYVF-------KKRDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP--PL-------KN---L 212 (261)
Q Consensus 152 ~~~~~wfQLy~~-------~dr~~~~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~~P--~~-------~~---l 212 (261)
..+..|++|++. .|...+.+..++.++.|++.+.+++|.|..++|..+......+| .+ .+ +
T Consensus 100 ~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI 179 (265)
T 1wv2_A 100 LDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNL 179 (265)
T ss_dssp TTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHH
T ss_pred cCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHH
Confidence 346679999987 67777777777777779999999999999999999988777666 11 11 1
Q ss_pred ccccc-cccccc-cccccCcccch-hhh
Q 024846 213 EGLLS-TKVSSV-RILKLMPRDHG-CFF 237 (261)
Q Consensus 213 ~~~~~-~~~~~~-~k~~m~~~d~~-~~~ 237 (261)
+.+.+ .+++-+ ..||-||+|+. |.+
T Consensus 180 ~~I~e~~~vPVI~eGGI~TPsDAa~Ame 207 (265)
T 1wv2_A 180 RIILEEAKVPVLVDAGVGTASDAAIAME 207 (265)
T ss_dssp HHHHHHCSSCBEEESCCCSHHHHHHHHH
T ss_pred HHHHhcCCCCEEEeCCCCCHHHHHHHHH
Confidence 11112 255534 55799999988 554
No 24
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.80 E-value=0.056 Score=49.29 Aligned_cols=87 Identities=18% Similarity=0.173 Sum_probs=56.2
Q ss_pred eeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEeeecCH
Q 024846 94 TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFKKR 166 (261)
Q Consensus 94 ttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI-------a~~~~~~~wfQLy~~~dr 166 (261)
+++|| +..||+.|||++. . ...++.++.++|...++++.. .+.+++ .+..+.+...|++... .
T Consensus 6 ~~~l~--~~~Pii~apM~g~--s----~~~la~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-~ 75 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMAWV--A----DGDLAGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLTDKPFGVNIMLLS-P 75 (332)
T ss_dssp HHHHT--CSSSEEECCCTTT--C----CHHHHHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHCCSCEEEEECTTS-T
T ss_pred hHHhC--CCCCEEeCCCCCC--C----cHHHHHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEecCCC-C
Confidence 34666 7889999999743 2 345777788888755554332 233332 2222345677887521 1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCC
Q 024846 167 DIAATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p 191 (261)
+ ..+.++++.++|+..|.++.+.|
T Consensus 76 ~-~~~~~~~a~~~g~d~V~~~~g~p 99 (332)
T 2z6i_A 76 F-VEDIVDLVIEEGVKVVTTGAGNP 99 (332)
T ss_dssp T-HHHHHHHHHHTTCSEEEECSSCG
T ss_pred C-HHHHHHHHHHCCCCEEEECCCCh
Confidence 1 45778999999999999988765
No 25
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.72 E-value=0.16 Score=45.97 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=58.0
Q ss_pred eeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEeeec--
Q 024846 94 TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFK-- 164 (261)
Q Consensus 94 ttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI-------a~~~~~~~wfQLy~~~-- 164 (261)
+++|| +..||+.|||++. . +..++.++.++|...+++.....+.+++ .+..+.+.-.+++...
T Consensus 9 ~~~l~--~~~Pii~apM~gv--s----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQWV--G----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTTT--C----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCCC--C----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 45675 5789999999653 2 3458888888887666654332234433 2222334456777641
Q ss_pred -CHHHHHHHHHHHHHcCCcEEEEeecCC
Q 024846 165 -KRDIAATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 165 -dr~~~~~li~rAe~aG~~AlvvTVD~p 191 (261)
+.+ ..+.++.+.++|+..|.++.+.|
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p 107 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP 107 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc
Confidence 122 45778899999999999998765
No 26
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.62 E-value=0.28 Score=43.75 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=63.5
Q ss_pred cceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecC-CCCCc--------------------------
Q 024846 92 LSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSF-TSSSS-------------------------- 144 (261)
Q Consensus 92 tsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs-~ss~s-------------------------- 144 (261)
++++++|.++..||++||. . .+.++ ...+.+.+.|..+++.- .+..+
T Consensus 2 l~~~i~g~~l~npv~~Aag-~---~~~~~--~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASG-V---HCMTI--EDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTT-S---SCSSH--HHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCC-C---CCCCH--HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 6789999999999999972 1 12334 44466788887766532 11111
Q ss_pred HH----HHHhh---c--CCceeEEEeeecCHHHHHHHHHHHHHcCCc-EEEEeecCCCC
Q 024846 145 IE----EVAAS---C--NAVRFYQLYVFKKRDIAATLVQRAERNGFK-ALVLTADTPRL 193 (261)
Q Consensus 145 le----eIa~~---~--~~~~wfQLy~~~dr~~~~~li~rAe~aG~~-AlvvTVD~p~~ 193 (261)
++ .+... . ..+...|+. -.+.+...+.+++++++|+. +|.+++-+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~ 133 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV 133 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC
Confidence 22 23221 2 234566764 34667788899999999999 99999988876
No 27
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=93.76 E-value=0.13 Score=47.30 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=29.0
Q ss_pred CCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCce
Q 024846 88 SRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIM 135 (261)
Q Consensus 88 ~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~ 135 (261)
.++|++|++||.++.-||++|+ +.+..++|. .++..+.|.-+
T Consensus 33 ~~~~L~v~~~Gl~f~NPvglAa----G~~~~~~e~--~~~l~~~G~G~ 74 (354)
T 3tjx_A 33 GSMSLQVNLLNNTFANPFMNAA----GVMCTTTEE--LVAMTESASGS 74 (354)
T ss_dssp CCCCCCEEETTEEESSSEEECT----TSSCSSHHH--HHHHHHSSCSC
T ss_pred CCCceeEEECCEEcCCCcEEcc----CCCCCCHHH--HHHHHHcCCCE
Confidence 4678999999999999999985 213444553 44455555443
No 28
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=92.44 E-value=0.57 Score=43.10 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=53.9
Q ss_pred CcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH-------HhhcCCceeEEEeeecCH--------
Q 024846 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-------AASCNAVRFYQLYVFKKR-------- 166 (261)
Q Consensus 102 s~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI-------a~~~~~~~wfQLy~~~dr-------- 166 (261)
..||+.|||++ +. ....++.++.++|...+++... .+.+++ .+..+.+.-++++.++..
T Consensus 10 ~~Pii~apMag-gv----s~~~la~av~~aGglG~i~~~~-~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~ 83 (369)
T 3bw2_A 10 PLPIVQAPMAG-GV----SVPQLAAAVCEAGGLGFLAAGY-KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVE 83 (369)
T ss_dssp SSSEEECCCTT-TT----SCHHHHHHHHHTTSBEEEECTT-SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHH
T ss_pred cCCEEeCCCCC-CC----CcHHHHHHHHHCCCEEEcCCCC-CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHH
Confidence 88999999975 22 2467788888898777776532 334433 222233344555544321
Q ss_pred -------------------------HHHHHHHHHHHHcCCcEEEEeecCC
Q 024846 167 -------------------------DIAATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 167 -------------------------~~~~~li~rAe~aG~~AlvvTVD~p 191 (261)
+...+.++.+.++|+..+.++...|
T Consensus 84 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~ 133 (369)
T 3bw2_A 84 VYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP 133 (369)
T ss_dssp HHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC
T ss_pred HHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC
Confidence 1135677888889999999988765
No 29
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=91.13 E-value=0.24 Score=46.94 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=51.4
Q ss_pred Hhhcccccccccc-CCCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH
Q 024846 73 AFHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (261)
Q Consensus 73 Af~ri~L~pRvL~-dv~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa 149 (261)
.|++|.|+|..-. ..+++|++|.|- ...+..||+-|||++. .+..+|.|.+++|-+.+++. ..++|+++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~V------s~~~lA~Ava~aGGlGvi~~--~~~~e~~~ 81 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK--NMDMESQV 81 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTT------CSSHHHHHHHTTTCEEEECS--SSCHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCc------CcHHHHHHHHHCCCEEEeCC--CCCHHHHH
Confidence 3899999997433 235789999886 4678999999999743 25567888888888888875 45666554
No 30
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.20 E-value=1.4 Score=39.88 Aligned_cols=83 Identities=13% Similarity=0.168 Sum_probs=51.6
Q ss_pred ccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH-------hhcCCceeEEEeeecCHHHHHHH
Q 024846 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA-------ASCNAVRFYQLYVFKKRDIAATL 172 (261)
Q Consensus 100 ~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa-------~~~~~~~wfQLy~~~dr~~~~~l 172 (261)
.+..||+.|||++. . ...++.++.++|...+++... .+.+++. +....+.-.++... +. ...+.
T Consensus 24 ~~~~Pii~apM~gv--s----~~~la~av~~aGglG~i~~~~-~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~-~~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAWA--G----TPTLAAAVSEAGGLGIIGSGA-MKPDDLRKAISELRQKTDKPFGVNIILV-SP-WADDL 94 (326)
T ss_dssp TCSSSEEECCCTTT--S----CHHHHHHHHHTTSBEEEECTT-CCHHHHHHHHHHHHTTCSSCEEEEEETT-ST-THHHH
T ss_pred CCCCCEEECCCCCC--C----CHHHHHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEEecc-CC-CHHHH
Confidence 35789999999853 2 345788888888766665422 2344322 21223334455542 11 13677
Q ss_pred HHHHHHcCCcEEEEeecCC
Q 024846 173 VQRAERNGFKALVLTADTP 191 (261)
Q Consensus 173 i~rAe~aG~~AlvvTVD~p 191 (261)
++.+.++|+..|.++...|
T Consensus 95 ~~~~~~~g~d~V~l~~g~p 113 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTCSEEEEESSCC
T ss_pred HHHHHHCCCCEEEECCCCc
Confidence 8888889999999887754
No 31
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.13 E-value=0.74 Score=42.32 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=55.4
Q ss_pred cCcceeeccccccccCCchhhHHHHHHHHhcCC-ceeecCCCC-CcH-----HHHHhhc--CCceeEEEeeecCHHHHHH
Q 024846 101 ISAPIIIAPTALHKLANPEGEVATARAAASCNT-IMVLSFTSS-SSI-----EEVAASC--NAVRFYQLYVFKKRDIAAT 171 (261)
Q Consensus 101 ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi-~~~lSs~ss-~sl-----eeIa~~~--~~~~wfQLy~~~dr~~~~~ 171 (261)
+..||++|||++. .+......+.+.|- .++++.+.+ ..+ +.+.+.. +.+.+.||. -.+.+...+
T Consensus 2 l~nriv~APM~g~------td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDR------TDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTT------SSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCCC------CHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 5679999999752 23333344555553 333333221 111 2333322 357799998 456777888
Q ss_pred HHHHHHHcCCcEEEEeecCCCC
Q 024846 172 LVQRAERNGFKALVLTADTPRL 193 (261)
Q Consensus 172 li~rAe~aG~~AlvvTVD~p~~ 193 (261)
..++++++||..|-|++-+|..
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSE 96 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSH
T ss_pred HHHHHHHcCCCEEEECCcCCCC
Confidence 8999999999999999988874
No 32
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=88.46 E-value=0.24 Score=53.93 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=35.4
Q ss_pred ccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCC
Q 024846 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTS 141 (261)
Q Consensus 100 ~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~s 141 (261)
.+..||+++||++-.+ .++...++|+||.++|+.+.+|...
T Consensus 848 ~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg 888 (1479)
T 1ea0_A 848 AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG 888 (1479)
T ss_dssp HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC
T ss_pred cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc
Confidence 7899999999986544 5778999999999999999998754
No 33
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=85.42 E-value=6 Score=36.61 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=62.9
Q ss_pred ccccccCCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceee-cCC------------------
Q 024846 80 RPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFT------------------ 140 (261)
Q Consensus 80 ~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l-Ss~------------------ 140 (261)
.|+--..+..+|++++++|.++.-||++|.- ..-. .....++....|.-+++ +|.
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG----~~~~--~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAG----VMCT--TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTT----SSCS--SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccC----CCCC--CHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 4555556778999999999999999999872 1111 23344555556654432 211
Q ss_pred --------CCCcHHHH----Hhhc--C-CceeEEEeeecCHHHHHHHHHHHH---HcCCcEEEEeecCCCC
Q 024846 141 --------SSSSIEEV----AASC--N-AVRFYQLYVFKKRDIAATLVQRAE---RNGFKALVLTADTPRL 193 (261)
Q Consensus 141 --------ss~sleeI----a~~~--~-~~~wfQLy~~~dr~~~~~li~rAe---~aG~~AlvvTVD~p~~ 193 (261)
.+.+++.+ .+.. + .+...||. -.+.+...+.+++++ ++|+.+|.|.+-+|..
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~ 168 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV 168 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC
Confidence 12345543 3221 2 35677874 345666777788877 6799999999998875
No 34
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=80.64 E-value=0.87 Score=49.83 Aligned_cols=41 Identities=15% Similarity=-0.019 Sum_probs=35.1
Q ss_pred ccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCC
Q 024846 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTS 141 (261)
Q Consensus 100 ~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~s 141 (261)
.+..||+++||++-.+ -++...++|+||.++|+.+.+|...
T Consensus 865 ~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg 905 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGG 905 (1520)
T ss_dssp HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTC
T ss_pred cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCC
Confidence 6899999999986443 4578899999999999999999764
No 35
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=80.26 E-value=17 Score=33.36 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=62.6
Q ss_pred CCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeec-CC--------------------------CC
Q 024846 90 IDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS-FT--------------------------SS 142 (261)
Q Consensus 90 ~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lS-s~--------------------------ss 142 (261)
+|++++++|.++.-||++|. +..- -.....+.+...|.-+++. |. .+
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAa----G~~~--~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n 109 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAA----GVYC--MTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPN 109 (345)
T ss_dssp CCCCEEETTEEESCSEEECT----TSSC--SSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCB
T ss_pred CCcCeEECCEECCCCCEEcC----CCCC--CCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCC
Confidence 68999999999999999984 1111 1234455566666554433 21 11
Q ss_pred CcHHH----HHhh---c-CCceeEEEeeecCHHHHHHHHHHHHHcCCc-EEEEeecCCCC
Q 024846 143 SSIEE----VAAS---C-NAVRFYQLYVFKKRDIAATLVQRAERNGFK-ALVLTADTPRL 193 (261)
Q Consensus 143 ~slee----Ia~~---~-~~~~wfQLy~~~dr~~~~~li~rAe~aG~~-AlvvTVD~p~~ 193 (261)
..+|. +.+. . ..+...||.- .+.+...+..++++++|+. +|.|.+-+|..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~g-~~~~d~~~~a~~l~~~g~~d~ielNisCPn~ 168 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLVG-MSPEETHTILXMVEASKYQGLVELNLSCPNV 168 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEECC-SSHHHHHHHHHHHHHSSCCSEEEEECSCCCS
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEecC-CCHHHHHHHHHHHhccCCCcEEEEecCCCCc
Confidence 23333 3331 1 2456778863 4667778888888889987 99999988764
No 36
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=61.86 E-value=62 Score=29.01 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=17.9
Q ss_pred ceeeCCcccCcceeeccccccc
Q 024846 93 STTILDYKISAPIIIAPTALHK 114 (261)
Q Consensus 93 sttllG~~ls~Pi~iAP~g~~~ 114 (261)
..+|=|.++.-+|++|||+...
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~ 29 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYS 29 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCC
T ss_pred CeeECCEEEcCccEECCcCCCc
Confidence 3677788999999999997654
No 37
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=61.12 E-value=14 Score=36.55 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=50.8
Q ss_pred Hhhcccccccccc-CCCCCCcceee-CCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHh
Q 024846 73 AFHRITFRPRILV-DVSRIDLSTTI-LDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (261)
Q Consensus 73 Af~ri~L~pRvL~-dv~~~Dtsttl-lG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~ 150 (261)
-|+++.|+|..-. ..+++|++|.| =+.++..||+-|||--. -|..+|-+-++.|=+-++- -+.++|+-++
T Consensus 61 TfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTV------Te~~MAIamAr~GGiGvIH--~n~sie~Qa~ 132 (556)
T 4af0_A 61 TYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTV------TEDRMAIALALHGGLGIIH--HNCSAEEQAA 132 (556)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTT------CSHHHHHHHHHTTCEEEEC--CSSCHHHHHH
T ss_pred ChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCcccc------cCHHHHHHHHHCCCeEEEc--CCCCHHHHHH
Confidence 4899999997532 12468899888 47889999999997332 2677788888887777763 3456776443
Q ss_pred hc-----CCceeE--EEeeecCHHHHHHHHHHHHHcCCcEEEEeecC
Q 024846 151 SC-----NAVRFY--QLYVFKKRDIAATLVQRAERNGFKALVLTADT 190 (261)
Q Consensus 151 ~~-----~~~~wf--QLy~~~dr~~~~~li~rAe~aG~~AlvvTVD~ 190 (261)
.. -...|. .+.+..| ..+.+.++.-++-|+.++.|+-|.
T Consensus 133 ~V~~VKr~e~g~i~dPvtl~P~-~Tv~da~~l~~~~~isgvpVvd~g 178 (556)
T 4af0_A 133 MVRRVKKYENGFITDPLCLGPD-ATVGDVLEIKAKFGFCGVPITETG 178 (556)
T ss_dssp HHHHHHHCCC-------------------------------------
T ss_pred HHHHHHhcccCccCCCeEcCCC-CCHHHHHHHHHHhCCCcccccccc
Confidence 21 011111 1233332 334566666677888888888763
No 38
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=58.58 E-value=51 Score=29.57 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=43.2
Q ss_pred HHHHHHHhcCCceeecCCCCCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 123 ATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 123 alArAA~~~Gi~~~lSs~ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
..++.|.++|.=++--++...+++++.+..+-+-..+==...+.+...+.++.|.++|+..+++-
T Consensus 193 ~aariA~elGAD~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 193 LATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 47888889997776555444578888876542211110012255667888999999999988764
No 39
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=58.11 E-value=74 Score=29.01 Aligned_cols=45 Identities=9% Similarity=0.127 Sum_probs=29.4
Q ss_pred eeeCCcccCcceeeccccccccCCchh---hHHHHHHHHhcCCceeec
Q 024846 94 TTILDYKISAPIIIAPTALHKLANPEG---EVATARAAASCNTIMVLS 138 (261)
Q Consensus 94 ttllG~~ls~Pi~iAP~g~~~l~hp~g---E~alArAA~~~Gi~~~lS 138 (261)
.+|=+.++.-.|++|||+...-..++| +..+..-++.+|..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiit 56 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIIS 56 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEE
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 567778889999999997653112333 555555566666666554
No 40
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=56.09 E-value=22 Score=40.27 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=59.9
Q ss_pred cccccccC-CCCCCccee---eCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH-----
Q 024846 79 FRPRILVD-VSRIDLSTT---ILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA----- 149 (261)
Q Consensus 79 L~pRvL~d-v~~~Dtstt---llG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa----- 149 (261)
+.||..+- -.+++++|. ++| ..||+.|||++.- .+..+|.|+.++|-..+++.....+.|++.
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 56777762 233444443 577 5899999997431 255689999999999999333333444432
Q ss_pred --hhcC--CceeEEE-eeecC-HHHHHHHHHHHHHcCCcEEEEee
Q 024846 150 --ASCN--AVRFYQL-YVFKK-RDIAATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 150 --~~~~--~~~wfQL-y~~~d-r~~~~~li~rAe~aG~~AlvvTV 188 (261)
+..+ .+.-+-+ ++..+ .+...++++.+.+.|+....|++
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~ 674 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTI 674 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEee
Confidence 2231 2222222 22222 22346889999999999833444
No 41
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=53.12 E-value=12 Score=34.73 Aligned_cols=44 Identities=23% Similarity=0.153 Sum_probs=27.8
Q ss_pred hhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeecc
Q 024846 64 EHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (261)
Q Consensus 64 e~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP 109 (261)
|.+.+--..+++. .+.|+. +....++++++++|.++.-||++|.
T Consensus 24 e~ah~~~~~~l~~-~~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa 67 (367)
T 3zwt_A 24 ESAHRLAVRFTSL-GLLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA 67 (367)
T ss_dssp HHHHHHHHHHHHT-TCC----CCCCCGGGCEEETTEEESSSEEECT
T ss_pred HHHHHHHHHHHHh-cccccc-ccCCCCCCcEEECCEEcCCCCEeCC
Confidence 3333333444442 344542 3356788999999999999999985
No 42
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=52.55 E-value=25 Score=30.64 Aligned_cols=90 Identities=19% Similarity=0.141 Sum_probs=50.5
Q ss_pred CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeec-CCCC----CcHHHHHhhcCCceeEEEeeecCHHHHHHH
Q 024846 98 DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLS-FTSS----SSIEEVAASCNAVRFYQLYVFKKRDIAATL 172 (261)
Q Consensus 98 G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lS-s~ss----~sleeIa~~~~~~~wfQLy~~~dr~~~~~l 172 (261)
-..+..|+.+-++.+.. .+-...+.++-++.|+-.++. ...+ .-+|.++...+-.. +.+.|.++ ..++
T Consensus 59 A~~LGIpl~~v~~~g~~---~~e~e~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~---~~PLW~~d-~~~L 131 (237)
T 3rjz_A 59 ARALGIPLVKGFTQGEK---EKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEV---YTPAWGRD-AKEY 131 (237)
T ss_dssp HHHHTCCEEEEEC---------CHHHHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTTCEE---ECSSSSCC-HHHH
T ss_pred HHHcCCCEEEEECCCCc---hHHHHHHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcCCEE---EccccCCC-HHHH
Confidence 34455677776654421 112356667777777765554 2222 23566666554111 22222222 3478
Q ss_pred HHHHHHcCCcEEEEeecCCCCC
Q 024846 173 VQRAERNGFKALVLTADTPRLG 194 (261)
Q Consensus 173 i~rAe~aG~~AlvvTVD~p~~G 194 (261)
+++..++|++|+++.||+..++
T Consensus 132 l~e~i~~G~~aiiv~v~~~gL~ 153 (237)
T 3rjz_A 132 MRELLNLGFKIMVVGVSAYGLD 153 (237)
T ss_dssp HHHHHHTTCEEEEEEEESTTCC
T ss_pred HHHHHHCCCEEEEEEEecCCCC
Confidence 8888899999999999988765
No 43
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=52.21 E-value=77 Score=28.89 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=28.7
Q ss_pred eeeCCcccCcceeeccccccccCCchh---hHHHHHHHHhcCCceeec
Q 024846 94 TTILDYKISAPIIIAPTALHKLANPEG---EVATARAAASCNTIMVLS 138 (261)
Q Consensus 94 ttllG~~ls~Pi~iAP~g~~~l~hp~g---E~alArAA~~~Gi~~~lS 138 (261)
.+|=|.++.-.|++|||+...-..++| +..+..-++.++..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiit 56 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVS 56 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEE
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 567788899999999987654211343 555555555555555544
No 44
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=51.48 E-value=28 Score=32.72 Aligned_cols=104 Identities=20% Similarity=0.216 Sum_probs=59.4
Q ss_pred Hhhcccccccccc-CCCCCCcceeeCC-cccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHh
Q 024846 73 AFHRITFRPRILV-DVSRIDLSTTILD-YKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (261)
Q Consensus 73 Af~ri~L~pRvL~-dv~~~DtsttllG-~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~ 150 (261)
.|+++.|+|.-.. +..++|++++|-. ..+..||+.+||.... +..++.+..+.|-...+... .+.+++.+
T Consensus 13 ~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~~--~~~e~~~~ 84 (491)
T 1zfj_A 13 TFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHKN--MSITEQAE 84 (491)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECCS--SCHHHHHH
T ss_pred ChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeCC--CCHHHHHH
Confidence 3899999998654 3357788887643 4678999999987421 33344455556554444422 34444322
Q ss_pred -------hcC--CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 151 -------SCN--AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 151 -------~~~--~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
... .... +.+..+ ....+.++...+.+...+.|.
T Consensus 85 ~i~~v~~~~~im~~~~--~~v~~~-~tv~ea~~~m~~~~~~~~pVv 127 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDP--FFLTPE-HKVSEAEELMQRYRISGVPIV 127 (491)
T ss_dssp HHHHHHHHTTTTSSSC--CCBCSS-SBHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHhhHHhcCcCCC--eEECCC-CcHHHHHHHHHHcCCCEEEEE
Confidence 111 1111 112222 224566666777788887765
No 45
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=48.71 E-value=33 Score=32.45 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=31.4
Q ss_pred hhcccccccccc-CCCCCCcceeeCC-cccCcceeeccccc
Q 024846 74 FHRITFRPRILV-DVSRIDLSTTILD-YKISAPIIIAPTAL 112 (261)
Q Consensus 74 f~ri~L~pRvL~-dv~~~DtsttllG-~~ls~Pi~iAP~g~ 112 (261)
|+++.|.|..-. ..+.+|+++++-+ ..+..||+.||+..
T Consensus 17 ~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~ 57 (486)
T 2cu0_A 17 FDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDT 57 (486)
T ss_dssp GGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTT
T ss_pred ccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEcccee
Confidence 889999998654 4567889998854 68899999999864
No 46
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=47.22 E-value=33 Score=32.92 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=61.2
Q ss_pred hhcccccccccc-CCCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH--
Q 024846 74 FHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA-- 149 (261)
Q Consensus 74 f~ri~L~pRvL~-dv~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa-- 149 (261)
|+++.|.|..-. ..+++|++|.|- +..+..|++-|||.... |..+|-+-++.|-.-++.. +.++++.+
T Consensus 37 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~~~ 108 (511)
T 3usb_A 37 FDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQAEQ 108 (511)
T ss_dssp GGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHHH
T ss_pred eEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHHHH
Confidence 889999997432 124578888765 56788999999985332 4445555555555555543 34454422
Q ss_pred --h---hcCC--ceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEeec
Q 024846 150 --A---SCNA--VRFYQLYVFKKRDIAATLVQRAERNGFKALVLTAD 189 (261)
Q Consensus 150 --~---~~~~--~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTVD 189 (261)
+ .... ... +.+..+ ..+.+.++...+.++..+.|+=+
T Consensus 109 V~~V~~~~~~m~~d~--v~l~~~-~tv~ea~~~m~~~~~s~~pVvd~ 152 (511)
T 3usb_A 109 VDKVKRSESGVISDP--FFLTPE-HQVYDAEHLMGKYRISGVPVVNN 152 (511)
T ss_dssp HHHHHTSSSCSSSSC--CCBCTT-SBHHHHHHHHHHHCCSEEEEESC
T ss_pred HHHhhccccccccCC--EEECCC-CCHHHHHHHHHHcCCcEEEEEec
Confidence 2 1111 000 122222 33567777777889999888743
No 47
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=46.41 E-value=22 Score=31.46 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=38.9
Q ss_pred hHHHHHHHHhcCCceeecCCCCCcHHHHHhhc---CCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 121 EVATARAAASCNTIMVLSFTSSSSIEEVAASC---NAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 121 E~alArAA~~~Gi~~~lSs~ss~sleeIa~~~---~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
....|+++.+-+|..+.+......++++.+.. +-..|.-+ .+ .+.+++|.++|++-|++|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev---~t----~ee~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEV---HT----EQEADRALKAGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE---SS----HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEc---CC----HHHHHHHHHCCCCEEEEC
Confidence 36677777777788777766655565554433 32334433 23 344778888999999998
No 48
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=46.08 E-value=1e+02 Score=27.21 Aligned_cols=85 Identities=7% Similarity=-0.007 Sum_probs=48.9
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++--.+.|+-.+ +|| ..+-+.||- .+..++ +.+..+- ..+-..+
T Consensus 10 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 88 (300)
T 3eb2_A 10 PYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVADA 88 (300)
T ss_dssp EBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHH
T ss_pred EEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 455666543443455555667776667776443 333 233455542 222222 2333332 3456778
Q ss_pred HHHHHHHHHcCCcEEEEeec
Q 024846 170 ATLVQRAERNGFKALVLTAD 189 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD 189 (261)
.++.+.|+++|+.++++..=
T Consensus 89 i~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 89999999999999988643
No 49
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=45.12 E-value=1.6e+02 Score=26.89 Aligned_cols=44 Identities=11% Similarity=0.277 Sum_probs=27.5
Q ss_pred ceeeCCcccCcceeeccccccccCCchh---hHHHHHHHHhcCCceeec
Q 024846 93 STTILDYKISAPIIIAPTALHKLANPEG---EVATARAAASCNTIMVLS 138 (261)
Q Consensus 93 sttllG~~ls~Pi~iAP~g~~~l~hp~g---E~alArAA~~~Gi~~~lS 138 (261)
..+|=+.++.-.|++|||+... + ++| +..+..-++.+|..++++
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~-a-~~g~pt~~~~~~y~~rA~~GLiit 60 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSR-T-PDSVPGRLQQIYYGQRASAGLIIS 60 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCC-C-TTSCCCHHHHHHHHHTTTSSCEEE
T ss_pred CeeECCEEecCCeEECCCcCCc-C-CCCCCCHHHHHHHHHHhcCCEEEE
Confidence 4677778889999999987653 2 333 445555455555444443
No 50
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=45.07 E-value=19 Score=26.74 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCCC
Q 024846 166 RDIAATLVQRAERNGFKALV-LTADTPR 192 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p~ 192 (261)
...+++|+++|++.|+.||+ +.+|+..
T Consensus 34 ~~A~~rm~e~A~~lGAnAVVgvr~d~~~ 61 (81)
T 2jz7_A 34 DEIVENLRKQVKAKGGMGLIAFRITCAD 61 (81)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEccc
Confidence 34568999999999999975 5555544
No 51
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=43.49 E-value=31 Score=32.88 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=42.1
Q ss_pred hhccccccccccC-CCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH
Q 024846 74 FHRITFRPRILVD-VSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA 149 (261)
Q Consensus 74 f~ri~L~pRvL~d-v~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa 149 (261)
|+.+.|.|..-.= ..++|++|.|- +..+..|++.|||.... |..+|.+.++.|-..++. ...+.++.+
T Consensus 12 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVT------e~~lA~ala~~GGiGvI~--~~~~~e~~a 81 (490)
T 4avf_A 12 FDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVT------EARLAIAMAQEGGIGIIH--KNMGIEQQA 81 (490)
T ss_dssp GGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTSEEEEC--CSSCHHHHH
T ss_pred cceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhC------HHHHHHHHHHcCCCcccc--CCCCHHHHH
Confidence 8999999965431 23578888775 67899999999985432 344444445554444443 234455543
No 52
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=43.43 E-value=86 Score=27.93 Aligned_cols=83 Identities=14% Similarity=0.058 Sum_probs=49.4
Q ss_pred cceeeccccc-cccCCchhhHHHHHHHHhcCCceee--cC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHH
Q 024846 103 APIIIAPTAL-HKLANPEGEVATARAAASCNTIMVL--SF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRD 167 (261)
Q Consensus 103 ~Pi~iAP~g~-~~l~hp~gE~alArAA~~~Gi~~~l--Ss---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~ 167 (261)
.|.++.|+.- .+-.+.++=..+++--.+.|+-.++ || ..+-+.||- .+...+ +.+..+= .+-.
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~ 93 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATS 93 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHH
Confidence 3555667644 4444555556777777778875444 32 223445442 222222 3344442 3677
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 024846 168 IAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvT 187 (261)
.+.++.+.|+++|+.|+++.
T Consensus 94 ~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEc
Confidence 77889999999999999876
No 53
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=42.97 E-value=62 Score=38.14 Aligned_cols=105 Identities=20% Similarity=0.293 Sum_probs=62.9
Q ss_pred cccccccCC-CC--CCcc-eeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH------
Q 024846 79 FRPRILVDV-SR--IDLS-TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV------ 148 (261)
Q Consensus 79 L~pRvL~dv-~~--~Dts-ttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI------ 148 (261)
+.||+.+.- .. .+|. +++|| ..||+.|||++.. . ...+|.|..++|-...++...-.+.+.+
T Consensus 403 f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-s----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~ 474 (3089)
T 3zen_D 403 YAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-V----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAE 474 (3089)
T ss_dssp GCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-T----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHH
T ss_pred cCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-C----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHH
Confidence 677776632 22 2333 45788 7799999997532 1 2368888899998888865433344433
Q ss_pred -HhhcC-Cce--eEEEeeecCH---HH-HHHHHHHHHHcC--CcEEEEeecCC
Q 024846 149 -AASCN-AVR--FYQLYVFKKR---DI-AATLVQRAERNG--FKALVLTADTP 191 (261)
Q Consensus 149 -a~~~~-~~~--wfQLy~~~dr---~~-~~~li~rAe~aG--~~AlvvTVD~p 191 (261)
.+..+ +.. .=-+|..... .. .+++++.+.++| +.+|+++-+.|
T Consensus 475 ~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P 527 (3089)
T 3zen_D 475 LETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIP 527 (3089)
T ss_dssp HHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCC
T ss_pred HHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 33332 211 1123432211 11 157899999999 66688887777
No 54
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=42.45 E-value=1.3e+02 Score=26.29 Aligned_cols=83 Identities=14% Similarity=0.017 Sum_probs=49.2
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+- .+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 55566765 55456656577777777778744 34442 23455542 222232 2222221 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999998873
No 55
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=42.38 E-value=1.5e+02 Score=26.17 Aligned_cols=85 Identities=9% Similarity=-0.001 Sum_probs=50.5
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
.|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 355566764444445555577777777788753 34442 23455552 222222 2222221 245677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++++..
T Consensus 99 ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 88999999999999999873
No 56
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=41.31 E-value=22 Score=27.20 Aligned_cols=28 Identities=18% Similarity=0.219 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCCCC
Q 024846 166 RDIAATLVQRAERNGFKALV-LTADTPRL 193 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p~~ 193 (261)
++...+|.++|++.|+.||+ |.+|....
T Consensus 59 ~~A~~rm~~~A~~lGAnAVVgvr~d~~~i 87 (103)
T 1vr4_A 59 DIAMDEMKELAKQKGANAIVGVDVDYEVV 87 (103)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeee
Confidence 35568999999999999964 66665443
No 57
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.67 E-value=1.8e+02 Score=25.54 Aligned_cols=84 Identities=17% Similarity=0.013 Sum_probs=49.0
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++--.+.|+-.+ +||. .+-+.||- .+...+ +-+..+- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 455566543343455555677777777887533 3432 23455542 222222 2222221 2356778
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999998873
No 58
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=40.65 E-value=1.6e+02 Score=26.10 Aligned_cols=85 Identities=9% Similarity=0.001 Sum_probs=49.6
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCc--eeecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~--~~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
.|.++.|+.-.+-.+.++-..+++--.+.|+- +++||. .+-+.||- .+...+ +.+..+- ..+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 35566676444444555556777777777774 333432 33455542 222222 2222221 235677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++.+..
T Consensus 92 ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 78999999999999998864
No 59
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=39.77 E-value=1.4e+02 Score=26.08 Aligned_cols=82 Identities=22% Similarity=0.105 Sum_probs=48.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC-c-eeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA-V-RFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~-~-~wfQLy~~~dr~~~ 169 (261)
|.++.|+- .+-.+.++-..+++--.+.|+-. ++||. .+-+.||- .+...+ . -+..+- ..+-..+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 44566765 55456656567777777777744 34442 23455542 222232 2 222221 2355677
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 024846 170 ATLVQRAERNGFKALVLT 187 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvT 187 (261)
.++.+.|+++|+.++.+.
T Consensus 85 i~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI 102 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 889999999999999887
No 60
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=39.37 E-value=24 Score=27.63 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCC
Q 024846 166 RDIAATLVQRAERNGFKALV-LTADTP 191 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p 191 (261)
.+...+|+++|++.|+.||+ |..|+.
T Consensus 61 ~eA~~rM~e~A~~lGANAVIgvrfdts 87 (111)
T 3qkb_A 61 DEAKQKLKKKADLLEGDGIIGLKYNTE 87 (111)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEhh
Confidence 34568999999999999965 555554
No 61
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=39.37 E-value=1.2e+02 Score=26.69 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=49.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCceee--cCC---CCCcHHHH-------HhhcCC-ceeEEEee---ecCHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMVL--SFT---SSSSIEEV-------AASCNA-VRFYQLYV---FKKRD 167 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l--Ss~---ss~sleeI-------a~~~~~-~~wfQLy~---~~dr~ 167 (261)
|.++.|+ -.+-.+.++-..+++--.+.|+-.++ ||. .+-+.||- .+...+ . .+++. ..+-.
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~r--vpviaGvg~~~t~ 90 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTK--VKVLAGAGSNATH 90 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSS--CEEEEECCCSSHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC--CeEEEeCCCCCHH
Confidence 4556666 44445556667777777778875433 332 23455542 222233 1 12332 23567
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 024846 168 IAATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 168 ~~~~li~rAe~aG~~AlvvTV 188 (261)
.+.++.+.|+++|+.++.+..
T Consensus 91 ~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 788999999999999999873
No 62
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=39.19 E-value=38 Score=32.35 Aligned_cols=102 Identities=20% Similarity=0.180 Sum_probs=57.8
Q ss_pred hhcccccccccc-CCCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHH--
Q 024846 74 FHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVA-- 149 (261)
Q Consensus 74 f~ri~L~pRvL~-dv~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa-- 149 (261)
|+.+.|.|..-. ..+++|++|.|= +..+..||+.|||.... |..+|.+-++.|-..++.. +.+.++.+
T Consensus 13 ~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~~--n~s~e~qa~~ 84 (496)
T 4fxs_A 13 FDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQAAQ 84 (496)
T ss_dssp GGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHHH
T ss_pred cccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceecC--CCCHHHHHHH
Confidence 899999996442 113578888775 56789999999985432 3334334444443333432 33444322
Q ss_pred -----hhcC----CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEee
Q 024846 150 -----ASCN----AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 150 -----~~~~----~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (261)
.... .+.| +..+ ..+.+.++...+.++..+.|+=
T Consensus 85 V~~Vk~~~~~m~~d~v~----v~~~-~tv~ea~~~m~~~~~s~~PVvd 127 (496)
T 4fxs_A 85 VHQVKIFEAGVVTHPVT----VRPE-QTIADVMELTHYHGFAGFPVVT 127 (496)
T ss_dssp HHHHHHCCC--CBCCCC----BCSS-SBHHHHHHHHTSSCCCEEEEEC
T ss_pred HHhccccccccccCceE----ECCC-CCHHHHHHHHHHcCCcEEEEEc
Confidence 2111 1211 2222 3345667777778888888764
No 63
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=39.10 E-value=53 Score=29.13 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCCCC-Cccccccccccccccc-cccccCcccch-hhhh
Q 024846 170 ATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP-PLKNLEGLLSTKVSSV-RILKLMPRDHG-CFFK 238 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~~P-~~~~l~~~~~~~~~~~-~k~~m~~~d~~-~~~~ 238 (261)
.+++++++++|+.+|.|+- +.+. .++.-| ....+..+.. +++-+ ..|+.|++|+. +++.
T Consensus 143 ~~~a~~l~~~G~d~i~v~g-----~~~~----~~~~~~~~~~~i~~i~~-~ipVi~~GgI~s~~da~~~l~~ 204 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHT-----RTVV----QSFTGRAEWKALSVLEK-RIPTFVSGDIFTPEDAKRALEE 204 (318)
T ss_dssp HHHHHHHHHTTCCEEEEES-----SCTT----TTTSSCCCGGGGGGSCC-SSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcC-----CCcc----ccCCCCcCHHHHHHHHc-CCeEEEECCcCCHHHHHHHHHc
Confidence 4889999999999999862 1111 111112 2223333334 67744 55677999998 7764
No 64
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=38.84 E-value=1.9e+02 Score=25.37 Aligned_cols=84 Identities=14% Similarity=0.096 Sum_probs=47.9
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|-++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 44555653333345555567777777777744 34442 23455542 222222 2222221 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++++..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999998874
No 65
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.77 E-value=1.6e+02 Score=26.25 Aligned_cols=85 Identities=13% Similarity=0.063 Sum_probs=49.2
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCc--eeecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~--~~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
.|.++.|+--.+-.+.++-..+++-..+.|+- +++||. .+-+.||- .+...+ +.+..+- ..+-..
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 35556676444434555556777777777774 334432 33455542 222222 2222221 235677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++.+..
T Consensus 107 ai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 88999999999999998873
No 66
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=38.45 E-value=1.3e+02 Score=26.59 Aligned_cols=83 Identities=14% Similarity=0.116 Sum_probs=49.5
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+- .+-.+.++-..+++-..+.|+-. ++|| ..+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 19 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~a 96 (306)
T 1o5k_A 19 TAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKT 96 (306)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHH
Confidence 55566765 55456656577777777777744 3444 233455542 222222 2222221 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8999999999999998873
No 67
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=38.11 E-value=1.7e+02 Score=25.98 Aligned_cols=85 Identities=13% Similarity=-0.040 Sum_probs=50.6
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCcee--ecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
.|.++.|+--.+-.+.++-..+++-..+.|+-.+ +|| ..+-+.||- .+...+ +.+..+- ..+-..
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 3566667644444455555777777777887543 333 223455542 222222 2233321 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++++..
T Consensus 108 ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88999999999999998853
No 68
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=37.08 E-value=1.1e+02 Score=26.61 Aligned_cols=82 Identities=20% Similarity=0.130 Sum_probs=49.5
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecCC---CCCcHHHH-------HhhcCCceeEEEeeecCHHHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSFT---SSSSIEEV-------AASCNAVRFYQLYVFKKRDIAAT 171 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs~---ss~sleeI-------a~~~~~~~wfQLy~~~dr~~~~~ 171 (261)
|.++.|+- .+-.+.++-..+++-..+.|+-.+ +||. .+-+.||- .+...+ -+..+- ..+-..+.+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHH
Confidence 45566765 554555555677777777787543 4442 33455542 223334 222221 235567789
Q ss_pred HHHHHHHcCCcEEEEee
Q 024846 172 LVQRAERNGFKALVLTA 188 (261)
Q Consensus 172 li~rAe~aG~~AlvvTV 188 (261)
+.+.|+++|+.++++..
T Consensus 82 la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 82 LAKYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 99999999999998873
No 69
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=36.96 E-value=2.1e+02 Score=25.41 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=49.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCceee--cCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMVL--SFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l--Ss~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++--.+.|+-.++ ||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 28 ~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~a 106 (315)
T 3si9_A 28 TALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEA 106 (315)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 5556676433434555556777777778875443 332 23445542 222222 2222221 2356778
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 107 i~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8999999999999998873
No 70
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=36.92 E-value=1.4e+02 Score=26.54 Aligned_cols=84 Identities=10% Similarity=-0.038 Sum_probs=49.1
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC-ceeEEEeeecCHHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA-VRFYQLYVFKKRDIA 169 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~-~~wfQLy~~~dr~~~ 169 (261)
.|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+..+. +.+..+- ..+-..+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHH
Confidence 355566654344345555577777777788743 34432 33455542 233322 2222221 2366778
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 024846 170 ATLVQRAERNGFKALVLT 187 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvT 187 (261)
.++.+.|+++|+.++.+.
T Consensus 92 i~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 899999999999999884
No 71
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=36.87 E-value=1.6e+02 Score=26.09 Aligned_cols=82 Identities=10% Similarity=0.002 Sum_probs=47.7
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecC---CCCCcHHHH-------HhhcCCceeEEEee---ecCHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEV-------AASCNAVRFYQLYV---FKKRDI 168 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs---~ss~sleeI-------a~~~~~~~wfQLy~---~~dr~~ 168 (261)
|-++.|+--.+-.+.++-..+++--.+.|+-. ++|| ..+-+.||- .+..++.. .++. ..+-..
T Consensus 20 ~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~--pviaGvg~~~t~~ 97 (307)
T 3s5o_A 20 PPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNR--LLLAGSGCESTQA 97 (307)
T ss_dssp CBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTS--EEEEECCCSSHHH
T ss_pred EeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCC--cEEEecCCCCHHH
Confidence 45555654333344445567777777788744 3343 233455542 22223211 2332 235666
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 024846 169 AATLVQRAERNGFKALVLT 187 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvT 187 (261)
+.++.+.|+++|+.|+.+.
T Consensus 98 ai~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7899999999999999986
No 72
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=36.72 E-value=2e+02 Score=25.09 Aligned_cols=84 Identities=15% Similarity=0.027 Sum_probs=47.8
Q ss_pred ceeeccccccccCCchhhHHHHHHHHh-cCCce--eecC---CCCCcHHHH-------HhhcCC-c-eeEEEeeecCHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAAS-CNTIM--VLSF---TSSSSIEEV-------AASCNA-V-RFYQLYVFKKRDI 168 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~-~Gi~~--~lSs---~ss~sleeI-------a~~~~~-~-~wfQLy~~~dr~~ 168 (261)
|.++.|+--.+-.+.++=..+++-..+ .|+-. ++|| ..+-+.||- .+...+ . .+..+- ..+-..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 455566543333455555677776677 77744 3444 233455542 222232 2 222221 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++.+..
T Consensus 88 ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999998873
No 73
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=36.71 E-value=1.6e+02 Score=25.66 Aligned_cols=83 Identities=10% Similarity=0.061 Sum_probs=47.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCceee--cC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMVL--SF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l--Ss---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+ -.+-.+.++-..+++-..+.|+-.++ || ..+-+.||- .+...+ +-+..+- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4455666 44444555556777777777775543 33 223455442 222222 2222221 2345667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 8889999999999988874
No 74
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=36.70 E-value=55 Score=27.86 Aligned_cols=35 Identities=9% Similarity=-0.084 Sum_probs=20.0
Q ss_pred hhHHHHHHHHhcCC--ceeecCCCCCcHHHHHhhcCC
Q 024846 120 GEVATARAAASCNT--IMVLSFTSSSSIEEVAASCNA 154 (261)
Q Consensus 120 gE~alArAA~~~Gi--~~~lSs~ss~sleeIa~~~~~ 154 (261)
-+..+++.-++.|. ..+++|+....++.+.+..|.
T Consensus 118 ~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~ 154 (250)
T 3ks6_A 118 FVALVIAGLERHSMLERTTFSSFLLASMDELWKATTR 154 (250)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCC
Confidence 34555555555543 456666666666666666554
No 75
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=36.57 E-value=1.4e+02 Score=26.10 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=51.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+ .+.++-..+++-..+.|+-.. +|| ..+-+.||- .+...+ +-+..+- ..+-..+
T Consensus 8 ~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~a 85 (291)
T 3a5f_A 8 VAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAAS 85 (291)
T ss_dssp EECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 55667765556 677776778887777887543 443 233455542 222222 2222221 2355678
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999998883
No 76
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.42 E-value=93 Score=25.72 Aligned_cols=86 Identities=17% Similarity=0.250 Sum_probs=57.2
Q ss_pred eeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCC-CCCcHHHHHhhcCCceeEEEeeecCHHHHHHH
Q 024846 94 TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFT-SSSSIEEVAASCNAVRFYQLYVFKKRDIAATL 172 (261)
Q Consensus 94 ttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~-ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~l 172 (261)
..++-+.++.||.-=|+++.. -=.++.+|-+..+-..++|.. ....++.+....+- . ++.|...+.+...+.
T Consensus 62 a~~lr~~~~iPVV~I~~s~~D-----il~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~-~-i~~~~~~~~~e~~~~ 134 (196)
T 2q5c_A 62 SDYIKKSVSIPSISIKVTRFD-----TMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGV-K-IKEFLFSSEDEITTL 134 (196)
T ss_dssp HHHHHTTCSSCEEEECCCHHH-----HHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTC-E-EEEEEECSGGGHHHH
T ss_pred HHHHHHhCCCCEEEEcCCHhH-----HHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCC-c-eEEEEeCCHHHHHHH
Confidence 345556678999977754432 245666665555544555533 33567777776652 2 346777888889999
Q ss_pred HHHHHHcCCcEEEE
Q 024846 173 VQRAERNGFKALVL 186 (261)
Q Consensus 173 i~rAe~aG~~Alvv 186 (261)
++++++.|+++++=
T Consensus 135 i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 135 ISKVKTENIKIVVS 148 (196)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCeEEEC
Confidence 99999999998763
No 77
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=35.73 E-value=2.3e+02 Score=25.51 Aligned_cols=85 Identities=14% Similarity=0.039 Sum_probs=49.5
Q ss_pred cceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 103 APIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 103 ~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
.|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 356667764334345555567777767777643 44542 33455542 222222 2222221 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++++..
T Consensus 115 ai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999998873
No 78
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=34.44 E-value=1.6e+02 Score=25.94 Aligned_cols=82 Identities=12% Similarity=0.053 Sum_probs=47.5
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+ -.+-.+.++-..+++--.+.|+-.+ +|| ..+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4555666 4444455555677777677777543 343 233455542 222222 2222221 2355667
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 024846 170 ATLVQRAERNGFKALVLT 187 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvT 187 (261)
.++.+.|+++|+.++.+.
T Consensus 85 i~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 889999999999998887
No 79
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=34.44 E-value=35 Score=30.61 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=38.9
Q ss_pred chhhHHHHHHHHhcCCceeecCCCC----CcHHHHH-------hhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEE
Q 024846 118 PEGEVATARAAASCNTIMVLSFTSS----SSIEEVA-------ASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVL 186 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs~ss----~sleeIa-------~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alvv 186 (261)
.+-=.++.+||++.+.|.++..... .+++.++ +..+-+-.+.| |.....+.+.+|-++||.-+++
T Consensus 28 ~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMi 103 (286)
T 1gvf_A 28 AETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHL----DHHESLDDIRRKVHAGVRSAMI 103 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEE----EEECCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEc----CCCCCHHHHHHHHHcCCCeEEE
Confidence 3344788888888888888864322 1233322 22222323333 4444467788888888888766
Q ss_pred eec
Q 024846 187 TAD 189 (261)
Q Consensus 187 TVD 189 (261)
+--
T Consensus 104 DgS 106 (286)
T 1gvf_A 104 DGS 106 (286)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
No 80
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=34.15 E-value=1.8e+02 Score=25.38 Aligned_cols=83 Identities=18% Similarity=0.112 Sum_probs=48.6
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 45556653333345555567777777778744 34442 33455542 222232 2233332 2356678
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 024846 170 ATLVQRAERNGFKALVLT 187 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvT 187 (261)
.++.+.|+++|+.++++.
T Consensus 88 i~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 899999999999999887
No 81
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.00 E-value=1.4e+02 Score=26.08 Aligned_cols=84 Identities=18% Similarity=0.040 Sum_probs=47.9
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|-++.|+--.+-.+.++-..+++-..+.|+-.+ +||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 455666644443455555667776667776533 3432 23455542 222222 2222221 2356777
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999998863
No 82
>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1
Probab=33.42 E-value=29 Score=27.83 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeecCCCCC
Q 024846 166 RDIAATLVQRAERNGFKALV-LTADTPRLG 194 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~Alv-vTVD~p~~G 194 (261)
++.+.+|.++|++.|+.||+ |.+|....+
T Consensus 83 ~~Al~rm~~~A~~lGAnAVVGvr~d~~~i~ 112 (133)
T 1y2i_A 83 EIAFEELGSQARALGADAVVGIDIDYETVG 112 (133)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeeec
Confidence 35578999999999999964 677765443
No 83
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.35 E-value=2.7e+02 Score=25.58 Aligned_cols=84 Identities=12% Similarity=-0.054 Sum_probs=50.3
Q ss_pred CcceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCCceeEEEee---ecCH
Q 024846 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNAVRFYQLYV---FKKR 166 (261)
Q Consensus 102 s~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~~~wfQLy~---~~dr 166 (261)
-.|-++.|+.-.+-.+.++-..+++--.+.|+-. ++||. .+-+.||- .+..++. .+++. ..+-
T Consensus 63 i~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~gr--vpViaGvg~~st 140 (360)
T 4dpp_A 63 VITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGS--IKVIGNTGSNST 140 (360)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTT--SEEEEECCCSSH
T ss_pred eEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCC--CeEEEecCCCCH
Confidence 3456677765444455555567777777778753 33432 23445542 2222321 12332 2356
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 024846 167 DIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvT 187 (261)
..+.++.+.|+++|+.|+++.
T Consensus 141 ~eai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 141 REAIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEc
Confidence 778899999999999999887
No 84
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=32.58 E-value=2.1e+02 Score=25.21 Aligned_cols=84 Identities=8% Similarity=0.026 Sum_probs=48.5
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++|| ..+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 22 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~a 100 (304)
T 3cpr_A 22 VAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTS 100 (304)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHH
Confidence 55556654333345555567777777777744 3444 233455542 222232 2222221 2356678
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 101 i~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8999999999999998873
No 85
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=32.46 E-value=80 Score=29.09 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=22.7
Q ss_pred hhHHHHHHHHhcCCceeecCCCCCcHHHHHh
Q 024846 120 GEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (261)
Q Consensus 120 gE~alArAA~~~Gi~~~lSs~ss~sleeIa~ 150 (261)
|-..+.+.|++.|++++..-+...+++.+++
T Consensus 158 gl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~ 188 (350)
T 1vr6_A 158 GLEYLREAADKYGMYVVTEALGEDDLPKVAE 188 (350)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCHHHHHHHHH
Confidence 3467788888889998888776666666544
No 86
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=32.46 E-value=1.9e+02 Score=25.70 Aligned_cols=82 Identities=16% Similarity=0.102 Sum_probs=46.8
Q ss_pred ceeeccc-cccccCCchhhHHHHHHHHhcCCceee--cC---CCCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 104 PIIIAPT-ALHKLANPEGEVATARAAASCNTIMVL--SF---TSSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 104 Pi~iAP~-g~~~l~hp~gE~alArAA~~~Gi~~~l--Ss---~ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
|.++.|+ --.+-.+.++-..+++-..+.|+-.++ || ..+-+.||- .+...+ +.+..+- . +-..
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 4445565 333334555556777766777775443 33 233455542 222222 2233332 2 6666
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 024846 169 AATLVQRAERNGFKALVLT 187 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvT 187 (261)
+.++.+.|+++|+.++.+.
T Consensus 95 ai~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH 113 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 7888999999999998887
No 87
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=31.55 E-value=2.3e+02 Score=25.33 Aligned_cols=83 Identities=22% Similarity=0.126 Sum_probs=47.0
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 44555653333345555566777666677644 34442 23455542 222232 2222322 2355667
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 024846 170 ATLVQRAERNGFKALVLT 187 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvT 187 (261)
.++.+.|+++|+.++.+.
T Consensus 119 i~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 899999999999999887
No 88
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.53 E-value=1.2e+02 Score=25.99 Aligned_cols=136 Identities=17% Similarity=0.152 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHhhCChhh----hhhhcCCccchhcHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeecccc
Q 024846 36 VNLNEFQELARLALPKMY----YDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTA 111 (261)
Q Consensus 36 ~~l~D~e~~Ar~~Lp~~~----~~Y~~gGa~de~T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g 111 (261)
++..++.+.+++..+... ...+.++-++.....+.. ++. -...++.. .=-+..++-..++.||+-=|++
T Consensus 19 ~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~--~~~--~~~dVIIS---RGgta~~Lr~~~~iPVV~I~vs 91 (225)
T 2pju_A 19 VSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKK--LAN--ERCDAIIA---AGSNGAYLKSRLSVPVILIKPS 91 (225)
T ss_dssp ECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHH--TTT--SCCSEEEE---EHHHHHHHHTTCSSCEEEECCC
T ss_pred EchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHH--Hhc--CCCeEEEe---CChHHHHHHhhCCCCEEEecCC
Confidence 456777777777766431 112334444443332221 111 01122211 1123445666788999977754
Q ss_pred ccccCCchhhHHHHHHHHhcCCceeecCCC-CCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEE
Q 024846 112 LHKLANPEGEVATARAAASCNTIMVLSFTS-SSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALV 185 (261)
Q Consensus 112 ~~~l~hp~gE~alArAA~~~Gi~~~lSs~s-s~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alv 185 (261)
+.. -=.++.++-+..+-..++|... ...++.+....+- . ++.|...+.+..++.++++++.|+++++
T Consensus 92 ~~D-----il~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~-~-i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYD-----VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNL-R-LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHH-----HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTC-C-EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHH-----HHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCC-c-eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 432 2355666555445555555433 2345666665542 1 2467788999999999999999999876
No 89
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=31.39 E-value=2.1e+02 Score=25.35 Aligned_cols=27 Identities=26% Similarity=0.445 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEeecCCCCCC
Q 024846 166 RDIAATLVQRAERNGFK--ALVLTADTPRLGR 195 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~--AlvvTVD~p~~G~ 195 (261)
.+...+++++|+++|.+ -|+++ |+.|.
T Consensus 162 ~~~l~~~i~~a~~~Gi~~~~IilD---Pg~gf 190 (282)
T 1aj0_A 162 NRYFIEQIARCEQAGIAKEKLLLD---PGFGF 190 (282)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE---CCTTS
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe---CCCCc
Confidence 45668899999999998 78888 55443
No 90
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=31.34 E-value=51 Score=28.83 Aligned_cols=33 Identities=3% Similarity=-0.217 Sum_probs=25.7
Q ss_pred ceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 155 VRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 155 ~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
+.+.-+.+..+.+...++.++++++|+.+|.++
T Consensus 160 Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 160 PLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 455556655577777888999999999999875
No 91
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=31.01 E-value=97 Score=27.42 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=26.5
Q ss_pred chhhHHHHHHHHhcCCceeecCCCCCcHHHHHhh
Q 024846 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~ 151 (261)
.+|-..+.+.|++.|++++..-....+++.+.+.
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 121 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY 121 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh
Confidence 4566888999999999999987777777666443
No 92
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.37 E-value=2.2e+02 Score=25.09 Aligned_cols=84 Identities=14% Similarity=0.068 Sum_probs=48.0
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 44556654333345555567777777777744 34442 23455542 222222 2222221 2255667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 8899999999999998873
No 93
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.58 E-value=1.6e+02 Score=25.74 Aligned_cols=82 Identities=15% Similarity=0.039 Sum_probs=48.3
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHHH---hh----cCCceeEEEeeecCHHHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEVA---AS----CNAVRFYQLYVFKKRDIAAT 171 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeIa---~~----~~~~~wfQLy~~~dr~~~~~ 171 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||-. +. ..+ -+..+- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 45566654334345555567777777777744 34442 334555532 21 223 222221 235567788
Q ss_pred HHHHHHHcCCcEEEEe
Q 024846 172 LVQRAERNGFKALVLT 187 (261)
Q Consensus 172 li~rAe~aG~~AlvvT 187 (261)
+.+.|+++|+.++++.
T Consensus 83 la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHHTSCCSEEEEC
T ss_pred HHHHHHhcCCCEEEEc
Confidence 9999999999999887
No 94
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=29.38 E-value=51 Score=31.30 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=23.8
Q ss_pred ccccccccccCCCCCCcceeeCCcccCcceeecc
Q 024846 76 RITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (261)
Q Consensus 76 ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP 109 (261)
++.+.|+.. ....+.++++++|.++.-||++|+
T Consensus 67 ~~~~~~~~~-~~~~~~l~~~i~Gl~~~NPvglAA 99 (443)
T 1tv5_A 67 KYNILPYDT-SNDSIYACTNIKHLDFINPFGVAA 99 (443)
T ss_dssp HTTCSCCCC-SCCCGGGCEEETTEEESSSEEECT
T ss_pred hccCCcccc-cCCCccCCeEECCEEeCCCcEECC
Confidence 345556532 223456799999999999999996
No 95
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.60 E-value=2e+02 Score=25.06 Aligned_cols=84 Identities=12% Similarity=0.013 Sum_probs=45.0
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 44555653333344555466666666667644 34432 23445442 222222 2222221 2245667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7888888999999988873
No 96
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=28.44 E-value=1.2e+02 Score=27.15 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEe
Q 024846 166 RDIAATLVQRAERNGFK--ALVLT 187 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~--AlvvT 187 (261)
.+...+++++|+++|.+ -|+++
T Consensus 170 ~~~l~~~i~~a~~~Gi~~~~IilD 193 (294)
T 2y5s_A 170 RDFLAARAQALRDAGVAAERICVD 193 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45567889999999998 78888
No 97
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=27.93 E-value=1.1e+02 Score=27.55 Aligned_cols=85 Identities=11% Similarity=0.092 Sum_probs=52.4
Q ss_pred CcceeeccccccccCCchhhHHHHHHHHhcCCc---eeecCCCCCcHHHHHhh---cCCceeEEEeeecCHHHHHHHHHH
Q 024846 102 SAPIIIAPTALHKLANPEGEVATARAAASCNTI---MVLSFTSSSSIEEVAAS---CNAVRFYQLYVFKKRDIAATLVQR 175 (261)
Q Consensus 102 s~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~---~~lSs~ss~sleeIa~~---~~~~~wfQLy~~~dr~~~~~li~r 175 (261)
..||.|.=+ .+++-+..++++|.++|.- ++-|-.. ...+++.+. .+. ... +-.++|-+..++++++
T Consensus 122 ~vplsI~DT-----~~~~~~~~V~eaal~aga~~k~iINdvs~-~~~~~~~~~aa~~g~-~vv-~m~~~dv~~l~~~~~~ 193 (310)
T 2h9a_B 122 DVPLMIIGC-----GVEEKDAEIFPVIGEALSGRNCLLSSATK-DNYKPIVATCMVHGH-SVV-ASAPLDINLSKQLNIM 193 (310)
T ss_dssp SSCEEEECC-----SCHHHHHHHHHHHHHHTTTSCCEEEEECT-TTHHHHHHHHHHHTC-EEE-EECSSCHHHHHHHHHH
T ss_pred CceEEEECC-----CCCCCCHHHHHHHHHhCCCCCCEEEECCC-CccHHHHHHHHHhCC-CEE-EEChhHHHHHHHHHHH
Confidence 567766222 3677788888888888763 4443222 245555443 232 211 2223478889999999
Q ss_pred HHHcCC--cEEEEeecCCCCC
Q 024846 176 AERNGF--KALVLTADTPRLG 194 (261)
Q Consensus 176 Ae~aG~--~AlvvTVD~p~~G 194 (261)
|+++|. +-|+++-=.-.+|
T Consensus 194 a~~~Gi~~e~IilDPg~g~~g 214 (310)
T 2h9a_B 194 IMEMNLAPNRIIMDPLIGALG 214 (310)
T ss_dssp HHTTTCCGGGEEEECCCCCTT
T ss_pred HHHCCCChhhEEEeCCCcccc
Confidence 999999 6788875543334
No 98
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=27.77 E-value=1.2e+02 Score=27.14 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 024846 167 DIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvT 187 (261)
+...+++++|+++|.+-|+++
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEc
Confidence 456788999999999977777
No 99
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.19 E-value=2.7e+02 Score=24.28 Aligned_cols=83 Identities=13% Similarity=0.033 Sum_probs=47.6
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCcee--ecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIMV--LSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~--lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--. -.+.++-..+++--.+.|+-.+ +||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 4556676433 3455565677777777777433 3332 23445542 222222 2222221 2356677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 024846 170 ATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~~AlvvTV 188 (261)
.++.+.|+++|+.++.+..
T Consensus 87 i~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8899999999999998873
No 100
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=27.17 E-value=1.2e+02 Score=27.08 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q 024846 167 DIAATLVQRAERNGFK--ALVLT 187 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~--AlvvT 187 (261)
+..++++++|+++|.+ -|+++
T Consensus 182 ~~l~~~i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 182 ADLYDSIKIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCChhcEEEe
Confidence 5568889999999998 78888
No 101
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.79 E-value=2e+02 Score=25.20 Aligned_cols=83 Identities=20% Similarity=0.031 Sum_probs=47.4
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHHH-------hhcCCceeEEEeeecCHHHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEVA-------ASCNAVRFYQLYVFKKRDIAAT 171 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeIa-------~~~~~~~wfQLy~~~dr~~~~~ 171 (261)
|.++.|+--.+-.+.++-..+++-..+.|+-. ++||. .+-+.||-. +...+ .+..+- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 44556654333345555567777667777743 34442 334555432 22233 222221 235566788
Q ss_pred HHHHHHHcCCcEEEEee
Q 024846 172 LVQRAERNGFKALVLTA 188 (261)
Q Consensus 172 li~rAe~aG~~AlvvTV 188 (261)
+.+.|+++|+.++++..
T Consensus 83 la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHGGGSCCSEEEEEC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 89999999999988873
No 102
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.77 E-value=73 Score=28.01 Aligned_cols=23 Identities=30% Similarity=0.437 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 024846 169 AATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p 191 (261)
..+++++|.++|.+..+.|||.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCCCSH
T ss_pred CHHHHHHHHHCCCEEEEEcCCCH
Confidence 36778888888888888888764
No 103
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=26.67 E-value=1.3e+02 Score=34.29 Aligned_cols=104 Identities=13% Similarity=0.201 Sum_probs=58.5
Q ss_pred cccccccCCC-C--CCcc-eeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHH------
Q 024846 79 FRPRILVDVS-R--IDLS-TTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV------ 148 (261)
Q Consensus 79 L~pRvL~dv~-~--~Dts-ttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeI------ 148 (261)
+.||+.+--. . .+|. |++||+ .||+.+||+... ....++.|+.++|-..++......+.|++
T Consensus 565 f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~ 636 (2051)
T 2uv8_G 565 YHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDS 636 (2051)
T ss_dssp TCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHH
T ss_pred cCCccccCCCCchhHHHHHHHhhCc---cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHH
Confidence 5677665211 1 2233 558993 699999987322 24567888899998888843333334433
Q ss_pred -HhhcC--CceeEEE-eeecC-HHHHHHHHHHHHHcCCcEEEEeecC
Q 024846 149 -AASCN--AVRFYQL-YVFKK-RDIAATLVQRAERNGFKALVLTADT 190 (261)
Q Consensus 149 -a~~~~--~~~wfQL-y~~~d-r~~~~~li~rAe~aG~~AlvvTVD~ 190 (261)
.+..+ .+.-+-+ |+..+ ...-.++++.+.+.|++.-.|++-+
T Consensus 637 ~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~a 683 (2051)
T 2uv8_G 637 VVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGA 683 (2051)
T ss_dssp HHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecC
Confidence 22222 1222222 22222 1112388999999999985555543
No 104
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=26.57 E-value=2e+02 Score=26.23 Aligned_cols=67 Identities=22% Similarity=0.165 Sum_probs=42.6
Q ss_pred chhhHHHHHHHHhcCCceeecC---CCCCcHHHHHhhcC--CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 118 PEGEVATARAAASCNTIMVLSF---TSSSSIEEVAASCN--AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs---~ss~sleeIa~~~~--~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
..|..++|+++.++|+-++.+- -++.-++.+.+..+ ++.++| .++......+.-=|..+|.++++.|
T Consensus 23 ~~GneAva~~~~~ag~~~v~~yPgtP~t~i~~~l~~~~~~~g~~~i~---~e~E~~a~~~a~Gaa~aG~r~~~~t 94 (395)
T 1yd7_A 23 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQ---MEDEIASIAAAIGASWAGAKAMTAT 94 (395)
T ss_dssp EEHHHHHHHHHHHHTCCEEEECCBTTTBCHHHHHHHHGGGGTCEEEE---CSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEHHHHHHHHHHHcCCCEEEEEECcchHHHHHHHHHhhhhcCcEEEE---eCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 3689999999999999887774 23222355544222 333333 3566666676777777787766543
No 105
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=26.38 E-value=58 Score=30.78 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=24.4
Q ss_pred ccccccccccCCCCCCcceeeCCcccCcceeecc
Q 024846 76 RITFRPRILVDVSRIDLSTTILDYKISAPIIIAP 109 (261)
Q Consensus 76 ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP 109 (261)
++.+.|+. +....+.++++++|.++.-||++|.
T Consensus 69 ~~~~~~~~-~~~~~~~l~v~~~Gl~f~NPvglAA 101 (415)
T 3i65_A 69 KYNILPYD-TSNDSIYACTNIKHLDFINPFGVAA 101 (415)
T ss_dssp HTTCSCCC-CSCCCGGGCEEETTEEESSSEEECT
T ss_pred HhcCCCcc-cccccccccEEECCEECCCCCEECC
Confidence 45555643 2334566899999999999999987
No 106
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=26.36 E-value=1.4e+02 Score=27.60 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=40.5
Q ss_pred eeccccccccCCchhhHHHHHHHHhcCCce-------eecCCCCCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHH
Q 024846 106 IIAPTALHKLANPEGEVATARAAASCNTIM-------VLSFTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAER 178 (261)
Q Consensus 106 ~iAP~g~~~l~hp~gE~alArAA~~~Gi~~-------~lSs~ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~ 178 (261)
..||++|-.. ...+.+.-++.||-. ++||+..-. |+|.++-.-.-|+.+ .+.+.+.|.+|++
T Consensus 180 vAAPTAGLHF-----t~~Ll~~L~~kGv~~a~vTLHVG~GTF~PV~-e~i~~H~MHsE~~~V-----~~~ta~~in~aka 248 (345)
T 1wdi_A 180 VAAPTAGLHF-----TPELLERLREMGVELRFLTLHVGPGTFRPVK-GDPEKHEMHAEPYAI-----PEEVAEAVNRAKA 248 (345)
T ss_dssp -CCCCGGGGC-----CHHHHHHHHHTTCEEEEEEEEESGGGCCC----------CCCEEEEE-----CHHHHHHHHHHHH
T ss_pred hhcCCCCCCC-----CHHHHHHHHHCCCeEEEEEEeecCCCCcccc-cchhcCCccceEEEE-----CHHHHHHHHHHHH
Confidence 4567765432 344555666666643 355666666 888887655568876 3468899999999
Q ss_pred cCCcEEEEe
Q 024846 179 NGFKALVLT 187 (261)
Q Consensus 179 aG~~AlvvT 187 (261)
.|-+.|.|.
T Consensus 249 ~G~RViAVG 257 (345)
T 1wdi_A 249 EGRRVVAVG 257 (345)
T ss_dssp TTCCEEEES
T ss_pred cCCeEEEEe
Confidence 998887773
No 107
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=26.34 E-value=78 Score=28.32 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=16.4
Q ss_pred HHHHHHHHHH---HHcCCcEEEEee
Q 024846 167 DIAATLVQRA---ERNGFKALVLTA 188 (261)
Q Consensus 167 ~~~~~li~rA---e~aG~~AlvvTV 188 (261)
+..+++|+|| ++||+.+|++-.
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 3346777777 669999999965
No 108
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=26.31 E-value=1.1e+02 Score=27.43 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=24.2
Q ss_pred hhhHHHHHHHHhcCCceeecCCCCCcHHHHHh
Q 024846 119 EGEVATARAAASCNTIMVLSFTSSSSIEEVAA 150 (261)
Q Consensus 119 ~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~ 150 (261)
+|=..+.+.|++.|+++...-....+++-+.+
T Consensus 78 ~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~ 109 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITDVHEAEQAAPVAE 109 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHT
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 45567889999999999988776666665543
No 109
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=25.96 E-value=56 Score=28.17 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCC
Q 024846 167 DIAATLVQRAERNGFKALVLTADTPRL 193 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~AlvvTVD~p~~ 193 (261)
+.+.+.+++|++.+.++|+|++|+|+.
T Consensus 25 ~~l~~~l~~a~~~~~~~Ivl~inspGG 51 (230)
T 3viv_A 25 DQFDRYITIAEQDNAEAIIIELDTPGG 51 (230)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEBSCE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEeCCCc
Confidence 445666788888889999999999974
No 110
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=25.92 E-value=73 Score=27.07 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 024846 169 AATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p 191 (261)
..++++++.++|.+..+.|||.+
T Consensus 199 ~~~~v~~~~~~G~~v~~WTvn~~ 221 (252)
T 3qvq_A 199 DVQQVSDIKAAGYKVLAFTINDE 221 (252)
T ss_dssp CHHHHHHHHHTTCEEEEECCCCH
T ss_pred CHHHHHHHHHCCCEEEEEcCCCH
Confidence 35677888888888888888754
No 111
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=25.81 E-value=81 Score=29.33 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=26.5
Q ss_pred CCCCCcceeeCCcccC---cceeeccccccccCCchhhHHHHHHHHhcCCceee
Q 024846 87 VSRIDLSTTILDYKIS---APIIIAPTALHKLANPEGEVATARAAASCNTIMVL 137 (261)
Q Consensus 87 v~~~DtsttllG~~ls---~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l 137 (261)
...-||.+++-|..+. .+++++|++... .+--..+|++++++|..++.
T Consensus 124 ~~~~~t~i~i~~~~iG~~~~~~Iigpcsves---~e~a~~~a~~~k~aGa~~vk 174 (385)
T 3nvt_A 124 NKKEDTIVTVKGLPIGNGEPVFVFGPCSVES---YEQVAAVAESIKAKGLKLIR 174 (385)
T ss_dssp TCCSCCCEEETTEEETSSSCEEEEECSBCCC---HHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCcEEEECCEEECCCCeEEEEEeCCcCC---HHHHHHHHHHHHHcCCCeEE
Confidence 3334555565444432 478889987652 22334556666666655543
No 112
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.81 E-value=2.7e+02 Score=24.73 Aligned_cols=84 Identities=7% Similarity=-0.096 Sum_probs=47.1
Q ss_pred ceeecccc-ccccCCchhhHHHHHHHHhcCCce--eecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHH
Q 024846 104 PIIIAPTA-LHKLANPEGEVATARAAASCNTIM--VLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDI 168 (261)
Q Consensus 104 Pi~iAP~g-~~~l~hp~gE~alArAA~~~Gi~~--~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~ 168 (261)
|-++.|+- -.+-.+.++-..+++-..+.|+-. ++||. .+-+.||- .+...+ +.+..+- ..+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 44555654 333344555567777777778743 33432 23445542 222222 2233221 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 024846 169 AATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTV 188 (261)
+.++.+.|+++|+.++++..
T Consensus 95 ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 78899999999999988843
No 113
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=25.46 E-value=3.5e+02 Score=23.89 Aligned_cols=84 Identities=13% Similarity=0.001 Sum_probs=49.6
Q ss_pred ceeeccccccccCCchhhHHHHHHHHhcCCc--eeecCC---CCCcHHHH-------HhhcCC--ceeEEEeeecCHHHH
Q 024846 104 PIIIAPTALHKLANPEGEVATARAAASCNTI--MVLSFT---SSSSIEEV-------AASCNA--VRFYQLYVFKKRDIA 169 (261)
Q Consensus 104 Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~--~~lSs~---ss~sleeI-------a~~~~~--~~wfQLy~~~dr~~~ 169 (261)
|.++.|+--.+-.+.++-..+++-..+.|+- +++||. .+-+.||- .+...+ +.+..+- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566676444445666667777777778874 334432 23445542 223222 2222221 2356678
Q ss_pred HHHHHHHHHcCC-cEEEEee
Q 024846 170 ATLVQRAERNGF-KALVLTA 188 (261)
Q Consensus 170 ~~li~rAe~aG~-~AlvvTV 188 (261)
.++.+.|+++|+ .++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 899999999997 9988863
No 114
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.21 E-value=1.9e+02 Score=23.80 Aligned_cols=84 Identities=13% Similarity=0.079 Sum_probs=46.8
Q ss_pred ccCcceeeccccccccCCchhhHHHHHHHHhcCCcee---ecC----CCCCcHHHHHhhc--CCce--eEEEeeecCHHH
Q 024846 100 KISAPIIIAPTALHKLANPEGEVATARAAASCNTIMV---LSF----TSSSSIEEVAASC--NAVR--FYQLYVFKKRDI 168 (261)
Q Consensus 100 ~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~---lSs----~ss~sleeIa~~~--~~~~--wfQLy~~~dr~~ 168 (261)
...+++.++......+ .-....+.++++|.-.+ ... .+...++++++.. -++. -+..+..+..+.
T Consensus 15 ~~~~klg~~~~~~~~~----~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~ 90 (257)
T 3lmz_A 15 VNPFHLGMAGYTFVNF----DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEE 90 (257)
T ss_dssp CCSSEEEECGGGGTTS----CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHH
T ss_pred CCceEEEEEEEeecCC----CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHH
Confidence 3456777777655442 12344555566665433 211 1112234444432 1222 122233367888
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 024846 169 AATLVQRAERNGFKALVLT 187 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvT 187 (261)
.++.++.|++.|++.|++.
T Consensus 91 ~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 91 IDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhCCCEEEec
Confidence 8999999999999999985
No 115
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=24.79 E-value=1.2e+02 Score=27.64 Aligned_cols=88 Identities=11% Similarity=0.160 Sum_probs=51.2
Q ss_pred cCcceeeccccccccCCchhhHHHHHHHHhcCC---ceeecCCCCCcHHHHHh---hcCCceeEEEeeecCHHHHHHHHH
Q 024846 101 ISAPIIIAPTALHKLANPEGEVATARAAASCNT---IMVLSFTSSSSIEEVAA---SCNAVRFYQLYVFKKRDIAATLVQ 174 (261)
Q Consensus 101 ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi---~~~lSs~ss~sleeIa~---~~~~~~wfQLy~~~dr~~~~~li~ 174 (261)
+..||.|-=+ .++.-+..++++|.++|. +.+-| .+...++++.+ ..+.+ .. +-.+.|-+..+++++
T Consensus 128 ~~vPlsIDg~-----~~~T~~~eV~eaAleagag~~~lINs-v~~~~~~~m~~laa~~g~~-vV-lmh~~d~~~~~~l~~ 199 (323)
T 4djd_D 128 VGVPLVVVGC-----GDVEKDHEVLEAVAEAAAGENLLLGN-AEQENYKSLTAACMVHKHN-II-ARSPLDINICKQLNI 199 (323)
T ss_dssp CCSCEEEECC-----SCHHHHHHHHHHHHHHTTTSCCEEEE-EBTTBCHHHHHHHHHHTCE-EE-EECSSCHHHHHHHHH
T ss_pred CCceEEEECC-----CCCCCCHHHHHHHHHhcCCCCCeEEE-CCcccHHHHHHHHHHhCCe-EE-EEccchHHHHHHHHH
Confidence 4567777422 355556777888877762 23333 22223444443 33322 11 112457788899999
Q ss_pred HHHHcCC--cEEEEeecCCCCCCc
Q 024846 175 RAERNGF--KALVLTADTPRLGRR 196 (261)
Q Consensus 175 rAe~aG~--~AlvvTVD~p~~G~R 196 (261)
+|.++|. +-|+++-=.-.+|+.
T Consensus 200 ~a~~~GI~~e~IIlDPg~g~fgk~ 223 (323)
T 4djd_D 200 LINEMNLPLDHIVIDPSIGGLGYG 223 (323)
T ss_dssp HHHTTTCCGGGEEEECCCCCTTTT
T ss_pred HHHHcCCCHHHEEEeCCCccccCC
Confidence 9999999 668887554434443
No 116
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=24.52 E-value=4.1e+02 Score=25.63 Aligned_cols=20 Identities=0% Similarity=-0.006 Sum_probs=16.4
Q ss_pred ceeeCCcccCcceeeccccc
Q 024846 93 STTILDYKISAPIIIAPTAL 112 (261)
Q Consensus 93 sttllG~~ls~Pi~iAP~g~ 112 (261)
..+|=+.++.-+|++|||+.
T Consensus 8 p~~ig~~~l~nRi~~apm~~ 27 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHT 27 (671)
T ss_dssp CEECSSCEESSSEEECCCCC
T ss_pred CeeECCEEEcCceEECCccC
Confidence 35667788999999999875
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=24.35 E-value=1.1e+02 Score=28.60 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=37.1
Q ss_pred hhcccccccccc-CCCCCCcceeeC-CcccCcceeeccccccccCCchhhHHHHHHHHhcCCceee
Q 024846 74 FHRITFRPRILV-DVSRIDLSTTIL-DYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL 137 (261)
Q Consensus 74 f~ri~L~pRvL~-dv~~~Dtsttll-G~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~~l 137 (261)
|+.|.|.|..-. +..++|++++|. +..+..|++.+|+.... +..+|.+-.+.|-.-++
T Consensus 19 ~~dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~v~------~~~lA~al~~~GglG~i 78 (494)
T 1vrd_A 19 FDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVT------EAALAKALAREGGIGII 78 (494)
T ss_dssp GGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHTTTCEEEE
T ss_pred cccEEeccccccCCCCceEEEehhhCCCccCceeEecchHHHh------HHHHHHHHHHcCCceEE
Confidence 778888765332 333678888886 56788899999975432 34566665665544333
No 118
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=24.23 E-value=50 Score=29.69 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHhcCCceeecCCC----C-CcHHHH-------Hh--hcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEE
Q 024846 119 EGEVATARAAASCNTIMVLSFTS----S-SSIEEV-------AA--SCNAVRFYQLYVFKKRDIAATLVQRAERNGFKAL 184 (261)
Q Consensus 119 ~gE~alArAA~~~Gi~~~lSs~s----s-~sleeI-------a~--~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Al 184 (261)
+-=.++.+||++.+.|.++.... - .+++.+ ++ ...-+-.+.| |.....+.+.+|-++||.-+
T Consensus 32 e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSV 107 (288)
T 3q94_A 32 EWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHL----DHGSSFEKCKEAIDAGFTSV 107 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEE----EEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEEC----CCCCCHHHHHHHHHcCCCeE
Confidence 33467888888888888875311 0 123222 22 1222323333 44445667777777888877
Q ss_pred EEeec
Q 024846 185 VLTAD 189 (261)
Q Consensus 185 vvTVD 189 (261)
+++--
T Consensus 108 MiDgS 112 (288)
T 3q94_A 108 MIDAS 112 (288)
T ss_dssp EECCT
T ss_pred EEeCC
Confidence 76433
No 119
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=24.10 E-value=1.7e+02 Score=19.89 Aligned_cols=34 Identities=32% Similarity=0.435 Sum_probs=26.0
Q ss_pred CceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 154 AVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 154 ~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
+..|+|+--..+++..+.+.++....|+.+.++.
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~ 41 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVLL 41 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEec
Confidence 5577888888888888888888877788777653
No 120
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=24.03 E-value=54 Score=27.43 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEEeecCCC
Q 024846 169 AATLVQRAERNGFKALVLTADTPR 192 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD~p~ 192 (261)
.++++++|.+.|.++|++|==.+.
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~ 41 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPM 41 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCC
Confidence 468999999999999999854433
No 121
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=23.83 E-value=90 Score=23.62 Aligned_cols=40 Identities=5% Similarity=-0.018 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 024846 166 RDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~ 205 (261)
+.++..+++.|.+.|++.|.++|+......+.--.+.||.
T Consensus 122 ~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 161 (188)
T 3h4q_A 122 TELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFH 161 (188)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCe
Confidence 3455667777788899999999987655444444567774
No 122
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=23.61 E-value=50 Score=27.31 Aligned_cols=21 Identities=19% Similarity=0.434 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCcEEEEeec
Q 024846 169 AATLVQRAERNGFKALVLTAD 189 (261)
Q Consensus 169 ~~~li~rAe~aG~~AlvvTVD 189 (261)
.++++++|.+.|+++|++|==
T Consensus 20 ~~e~v~~A~~~Gl~~iaiTDH 40 (245)
T 1m65_A 20 LSDYIAQAKQKGIKLFAITDH 40 (245)
T ss_dssp HHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC
Confidence 469999999999999999853
No 123
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.45 E-value=1.3e+02 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=26.4
Q ss_pred chhhHHHHHHHHhcCCceeecCCCCCcHHHHHhh
Q 024846 118 PEGEVATARAAASCNTIMVLSFTSSSSIEEVAAS 151 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~ 151 (261)
.+|-..+.+.+++.|++++..-....+++.+.+.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 106 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY 106 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh
Confidence 5666888999999999999987776666665443
No 124
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=23.34 E-value=92 Score=27.16 Aligned_cols=40 Identities=8% Similarity=-0.148 Sum_probs=27.9
Q ss_pred HHhhcCCceeEEEeeecCHHHHHHHHHHHHHcC-CcEEEEe
Q 024846 148 VAASCNAVRFYQLYVFKKRDIAATLVQRAERNG-FKALVLT 187 (261)
Q Consensus 148 Ia~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG-~~AlvvT 187 (261)
|.+..+-+.++-+.+..+.+...++.++++++| +.+|.++
T Consensus 155 vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 155 VSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 333333344555655557777888899999999 9998865
No 125
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=23.29 E-value=67 Score=29.21 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=35.6
Q ss_pred chhhHHHHHHHHhcCCceeecCCCC------C----cHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHc--------
Q 024846 118 PEGEVATARAAASCNTIMVLSFTSS------S----SIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERN-------- 179 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs~ss------~----sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~a-------- 179 (261)
.+-=.++.+||++.+.|.++..... . .+.++++...-+-.+ .-|.....+++.+|.++
T Consensus 37 ~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaL----HlDHg~~~e~i~~ai~~~~~~~~~~ 112 (306)
T 3pm6_A 37 LEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITL----HLDHAQDPEIIKRAADLSRSETHEP 112 (306)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEE----EEEEECCHHHHHHHHHTC------C
T ss_pred HHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEE----EcCCCCCHHHHHHHHHhhhhccCCC
Confidence 3344788888888888888753210 0 011122222222222 22444445667777777
Q ss_pred CCcEEEEee
Q 024846 180 GFKALVLTA 188 (261)
Q Consensus 180 G~~AlvvTV 188 (261)
||.-++++.
T Consensus 113 GFtSVMiDg 121 (306)
T 3pm6_A 113 GFDSIMVDM 121 (306)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEEeC
Confidence 777777643
No 126
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=23.10 E-value=71 Score=27.66 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=24.2
Q ss_pred hHHHHHHHHhcCC---------ceeecCCCCCcHHHHHhhcCCceeEEEe
Q 024846 121 EVATARAAASCNT---------IMVLSFTSSSSIEEVAASCNAVRFYQLY 161 (261)
Q Consensus 121 E~alArAA~~~Gi---------~~~lSs~ss~sleeIa~~~~~~~wfQLy 161 (261)
+..+++.-++.|. ..+++|+....++.+.+..|.....+|+
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~ 199 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLV 199 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEE
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEe
Confidence 4556666666654 3567777666677777666644433443
No 127
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=22.56 E-value=1.5e+02 Score=27.55 Aligned_cols=82 Identities=15% Similarity=0.147 Sum_probs=45.7
Q ss_pred cceeeccccc-cccCCchhhHHHHHHHHhcCCceeecCCCCCcHHHHHhhcCCceeEEEeee---------------cCH
Q 024846 103 APIIIAPTAL-HKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVRFYQLYVF---------------KKR 166 (261)
Q Consensus 103 ~Pi~iAP~g~-~~l~hp~gE~alArAA~~~Gi~~~lSs~ss~sleeIa~~~~~~~wfQLy~~---------------~dr 166 (261)
.|+.+.|+.+ ...+-.+.+......-++.|..+--.+......-++.+..+ ..|+-|.+. .|.
T Consensus 10 ~~~~~~~~~~~~~~f~~G~Dis~~~~~e~~G~~y~~~~G~~~d~~~ilk~~G-~N~VRlrvwv~p~~~~g~~y~~g~~d~ 88 (399)
T 1ur4_A 10 SGLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAG-VNYVRVRIWNDPYDANGNGYGGGNNDL 88 (399)
T ss_dssp -CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTT-CCEEEEEECSCCBCTTCCBCSTTCCCH
T ss_pred CceEeecCCCCccceEEEEehhhhHHHHHcCCeeeCCCCccchHHHHHHHCC-CCEEEEeeecCCcccccCccCCCCCCH
Confidence 4666666533 22222344555555667788777543333344555544433 222223211 356
Q ss_pred HHHHHHHHHHHHcCCcEEE
Q 024846 167 DIAATLVQRAERNGFKALV 185 (261)
Q Consensus 167 ~~~~~li~rAe~aG~~Alv 185 (261)
+.+.++++||+++|.+.++
T Consensus 89 ~~~~~~a~~Ak~~GLkVll 107 (399)
T 1ur4_A 89 EKAIQIGKRATANGMKLLA 107 (399)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 7889999999999997554
No 128
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=22.40 E-value=89 Score=22.80 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 024846 166 RDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~ 205 (261)
+.++..+++.|++.|+..|.++|+..-...+.-=.|.||.
T Consensus 104 ~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~ 143 (153)
T 1z4e_A 104 SQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFK 143 (153)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCc
Confidence 3455666677888899999999876443333322355663
No 129
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=22.38 E-value=1.6e+02 Score=26.67 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=43.6
Q ss_pred HhcCCceeecCCCCCcHHHHHhhcCC-----------ceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 129 ASCNTIMVLSFTSSSSIEEVAASCNA-----------VRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 129 ~~~Gi~~~lSs~ss~sleeIa~~~~~-----------~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
.+.+-.++.=......++++.+..|+ ..|+.+...-++....+++.+.+++||++|+++
T Consensus 228 ~A~~~~~l~~nvp~~~l~~v~~~lPg~~~PTVspL~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 297 (304)
T 1nh8_A 228 FGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLADPDWVAIRALVPRRDVNGIMDELAAIGAKAILAS 297 (304)
T ss_dssp HHTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECSSTTEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HhcceEEEEEeCCHHHHHHHHHhccCCCCCeeeecCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 33444455444455679999877541 358888777788889999999999999999875
No 130
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=22.29 E-value=79 Score=23.10 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhHhhcCCC
Q 024846 166 RDIAATLVQRAERNGFKALVLTADTPRLGRREADIKNKMI 205 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~AlvvTVD~p~~G~Rerd~r~~f~ 205 (261)
+.++..+++.|.+.|++.|.++|+..-...+.--.+.||.
T Consensus 107 ~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~ 146 (166)
T 3jvn_A 107 EQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLN 146 (166)
T ss_dssp HHHHHHHHHHHHTTTCSEEEECCC--CCBC----------
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCe
Confidence 3455677777778899999999976544333333456664
No 131
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=22.20 E-value=1.2e+02 Score=27.19 Aligned_cols=21 Identities=24% Similarity=0.256 Sum_probs=17.0
Q ss_pred HHHHHHHHH---HHcCCcEEEEee
Q 024846 168 IAATLVQRA---ERNGFKALVLTA 188 (261)
Q Consensus 168 ~~~~li~rA---e~aG~~AlvvTV 188 (261)
..+++|+|| ++||+.+|++-.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec
Confidence 457888888 669999999965
No 132
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=21.82 E-value=1.9e+02 Score=25.28 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=22.8
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEeecCC
Q 024846 164 KKRDIAATLVQRAERNGFKALVLTADTP 191 (261)
Q Consensus 164 ~dr~~~~~li~rAe~aG~~AlvvTVD~p 191 (261)
.......+++++|.+.|.+..+.||+++
T Consensus 212 ~~~~~~~~~V~~ah~~G~~V~vWTv~t~ 239 (292)
T 3mz2_A 212 KITPEVREVIDMLHERGVMCMISTAPSD 239 (292)
T ss_dssp SCCHHHHHHHHHHHHTTBCEEEECTTTG
T ss_pred cccccCHHHHHHHHHCCCEEEEEeCCCc
Confidence 3444568899999999999999998764
No 133
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=21.80 E-value=37 Score=31.27 Aligned_cols=33 Identities=0% Similarity=-0.230 Sum_probs=23.1
Q ss_pred CceeEEEeeecCHHHHHHHHHHHHHcC-CcEEEE
Q 024846 154 AVRFYQLYVFKKRDIAATLVQRAERNG-FKALVL 186 (261)
Q Consensus 154 ~~~wfQLy~~~dr~~~~~li~rAe~aG-~~Alvv 186 (261)
-+.+.=|-+..|.+.+.++++.++++| +.+|++
T Consensus 194 ~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 194 HSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp SCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 344544555557666777788888998 998876
No 134
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=21.64 E-value=92 Score=22.19 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeec--CCCCCCchhHhhcCCC
Q 024846 166 RDIAATLVQRAERNGFKALVLTAD--TPRLGRREADIKNKMI 205 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~AlvvTVD--~p~~G~Rerd~r~~f~ 205 (261)
+.++..+++.|++.|++.+.++++ ..-...+.--.+.||.
T Consensus 99 ~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~ 140 (150)
T 3t9y_A 99 KRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYV 140 (150)
T ss_dssp HHHHHHHHHHHHHTTCSCEEECCCCCC------------CCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCE
Confidence 345566777788889999999988 4443333333456664
No 135
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=21.21 E-value=5.3e+02 Score=25.22 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=17.0
Q ss_pred ceeeCCcccCcceeeccccc
Q 024846 93 STTILDYKISAPIIIAPTAL 112 (261)
Q Consensus 93 sttllG~~ls~Pi~iAP~g~ 112 (261)
..+|-|.++.-+|++|||+.
T Consensus 12 p~~ig~~~l~NRiv~apm~~ 31 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCI 31 (729)
T ss_dssp CEEETTEEESSSEEECCCCC
T ss_pred CeeECCEEECCccEECCCcC
Confidence 36778899999999999865
No 136
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=21.04 E-value=1.6e+02 Score=27.32 Aligned_cols=110 Identities=18% Similarity=0.222 Sum_probs=51.9
Q ss_pred cHHHHHHHhhccccccccccCCCCCCcceeeCCcccCcceeeccccccccCCchhhHHHHHHHHhcCCce-------eec
Q 024846 66 TLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIM-------VLS 138 (261)
Q Consensus 66 T~~~N~~Af~ri~L~pRvL~dv~~~DtsttllG~~ls~Pi~iAP~g~~~l~hp~gE~alArAA~~~Gi~~-------~lS 138 (261)
.+.+-.+.+.++-|-|-+=+..+..+-=-|+|-++--+ ..||++|-.. ...+.+.-++.||-. ++|
T Consensus 141 ~~~~~L~~~G~~PLPPYI~r~~~D~erYQTVyAk~~Gs--vAAPTAGLHF-----t~eLl~~L~~kGv~~a~vTLHVG~G 213 (346)
T 1yy3_A 141 IFYEVLESLGEMPLPPYIKEQLDDKERYQTVYSKEIGS--AAAPTAGLHF-----TEEILQQLKDKGVQIEFITLHVGLG 213 (346)
T ss_dssp CHHHHHHHHHTCCCCHHHHTTSSSCC--------------CCCCSSTTCC-----CHHHHHHHHHHTEEEEECEEESGGG
T ss_pred cHHHHHHHCCCCCCCcccCCCCCChhhchhhhcCCCCh--hhcCCCCCCC-----CHHHHHHHHHCCCeEEEEEEeecCC
Confidence 35566666666666554433333333334566655332 4678876533 233444444555432 345
Q ss_pred CCCCCcHHHHHhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEe
Q 024846 139 FTSSSSIEEVAASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVLT 187 (261)
Q Consensus 139 s~ss~sleeIa~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvT 187 (261)
|+..-..|+|.++..-.-|+.+ .+.+.+.|.+|++.|-+.|.|.
T Consensus 214 TF~PV~~e~i~~H~MHsE~~~V-----~~~ta~~in~aka~G~RViAVG 257 (346)
T 1yy3_A 214 TFRPVSADEVEEHNMHAEFYQM-----SEETAAALNKVRENGGRIISVG 257 (346)
T ss_dssp GGC-----------CCCEEEEE-----CHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCccccccccCCcccEEEEE-----CHHHHHHHHHHHHcCCeEEEEe
Confidence 5555566888887655568877 3468899999999998877664
No 137
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=20.93 E-value=71 Score=29.25 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=35.4
Q ss_pred chhhHHHHHHHHhcCCceeecCCCC----CcHHHH-------HhhcCCceeEEEeeecCHHHHHHHHHHHHHcCCcEEEE
Q 024846 118 PEGEVATARAAASCNTIMVLSFTSS----SSIEEV-------AASCNAVRFYQLYVFKKRDIAATLVQRAERNGFKALVL 186 (261)
Q Consensus 118 p~gE~alArAA~~~Gi~~~lSs~ss----~sleeI-------a~~~~~~~wfQLy~~~dr~~~~~li~rAe~aG~~Alvv 186 (261)
.+.=.++.+||++.+.|.++..... .+.+.+ ++....++ +-+.-|.....+++.+|-++||.-+++
T Consensus 28 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VP---ValHlDHg~~~e~i~~ai~~GFtSVMi 104 (323)
T 2isw_A 28 MEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIP---ICIHLDHGDTLESVKMAIDLGFSSVMI 104 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSC---EEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCc---EEEECCCCCCHHHHHHHHHcCCCeEEe
Confidence 3344678888888888877753211 111111 11112221 222235555556677777777777766
Q ss_pred ee
Q 024846 187 TA 188 (261)
Q Consensus 187 TV 188 (261)
+-
T Consensus 105 Dg 106 (323)
T 2isw_A 105 DA 106 (323)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 138
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=20.53 E-value=1.4e+02 Score=26.43 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=24.3
Q ss_pred ceeEEEeeecCHHHHHHHHHHHHHcCCcEEEEee
Q 024846 155 VRFYQLYVFKKRDIAATLVQRAERNGFKALVLTA 188 (261)
Q Consensus 155 ~~wfQLy~~~dr~~~~~li~rAe~aG~~AlvvTV 188 (261)
+.++-+-+..+.+.+.++.++++++|+.+|.++-
T Consensus 213 Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 213 PIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 3444443334555678889999999999999873
No 139
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=20.14 E-value=1.9e+02 Score=25.30 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcCCcE--EEEeecC
Q 024846 166 RDIAATLVQRAERNGFKA--LVLTADT 190 (261)
Q Consensus 166 r~~~~~li~rAe~aG~~A--lvvTVD~ 190 (261)
.+..++++++|+++|.+. |+++-=.
T Consensus 146 ~~~l~~~~~~a~~~Gi~~~~IilDPg~ 172 (271)
T 2yci_X 146 SQLAMELVANADAHGIPMTELYIDPLI 172 (271)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCcccEEEecCC
Confidence 456688999999999985 8887543
No 140
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=20.11 E-value=1.6e+02 Score=27.93 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.9
Q ss_pred hhcccccccccc---CCCCCCcceeeCC--------cccCcceeecccc
Q 024846 74 FHRITFRPRILV---DVSRIDLSTTILD--------YKISAPIIIAPTA 111 (261)
Q Consensus 74 f~ri~L~pRvL~---dv~~~DtsttllG--------~~ls~Pi~iAP~g 111 (261)
|+.+.|.|..-. ..+++|++|.|-- ..+..|++.+++.
T Consensus 12 ~~d~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~ 60 (503)
T 1me8_A 12 FNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQ 60 (503)
T ss_dssp GGGEEECCCCCCTTCCGGGCBCCEECSCEETTCCCSCEESSSEEECSCT
T ss_pred cccEEEcCCCCCCccCCCcceeeeeccccccccccceeecCceEeccch
Confidence 899999998654 2357889887664 7899999999864
No 141
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=20.05 E-value=61 Score=29.46 Aligned_cols=19 Identities=16% Similarity=-0.001 Sum_probs=12.6
Q ss_pred hhHHHHHHHHhcCCceeec
Q 024846 120 GEVATARAAASCNTIMVLS 138 (261)
Q Consensus 120 gE~alArAA~~~Gi~~~lS 138 (261)
.=.++.+||++.+.|.++.
T Consensus 29 ~~~avi~AAee~~sPvIlq 47 (307)
T 3n9r_A 29 MLNAIFEAGNEENSPLFIQ 47 (307)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 3366777777777777764
Done!