Query 024849
Match_columns 261
No_of_seqs 280 out of 1394
Neff 6.4
Searched_HMMs 13730
Date Mon Mar 25 15:29:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024849.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024849hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1igna1 a.4.1.6 (A:360-445) DN 99.7 4.2E-21 3.1E-25 143.5 -5.4 71 14-85 1-76 (86)
2 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.7 1.9E-19 1.4E-23 122.3 3.0 52 12-64 1-52 (52)
3 d1gv2a2 a.4.1.3 (A:144-190) c- 99.7 2.1E-18 1.6E-22 114.7 6.1 47 67-113 1-47 (47)
4 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.7 8.8E-18 6.4E-22 113.9 5.8 50 65-114 1-51 (52)
5 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.7 1.5E-18 1.1E-22 116.8 1.9 50 14-64 1-50 (50)
6 d1igna1 a.4.1.6 (A:360-445) DN 99.6 4.1E-17 3E-21 121.6 5.1 66 67-132 1-72 (86)
7 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.6 1.3E-16 9.3E-21 107.2 5.9 48 67-114 1-49 (50)
8 d2ckxa1 a.4.1.3 (A:578-660) Te 99.6 1E-16 7.3E-21 118.6 1.5 74 15-91 1-82 (83)
9 d1w0ua_ a.4.1.4 (A:) Telomeric 99.5 3.4E-16 2.5E-20 107.1 1.4 54 13-66 1-55 (55)
10 d1w0ua_ a.4.1.4 (A:) Telomeric 99.5 3.9E-15 2.8E-19 101.7 5.9 51 66-116 1-54 (55)
11 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.5 4.9E-15 3.5E-19 100.1 6.3 48 66-113 1-51 (52)
12 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.5 7E-15 5.1E-19 103.4 6.5 54 67-120 2-55 (65)
13 d1gv2a2 a.4.1.3 (A:144-190) c- 99.5 5E-15 3.6E-19 98.1 2.0 46 14-61 1-46 (47)
14 d1x41a1 a.4.1.1 (A:8-54) Trans 99.5 3.2E-15 2.4E-19 99.0 1.0 44 16-60 3-46 (47)
15 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.5 4.2E-15 3.1E-19 100.4 1.6 49 13-61 1-50 (52)
16 d1x41a1 a.4.1.1 (A:8-54) Trans 99.4 3.3E-14 2.4E-18 94.0 5.1 43 69-111 3-46 (47)
17 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.4 5.8E-14 4.2E-18 97.3 6.5 50 62-111 7-60 (60)
18 d2cjja1 a.4.1.3 (A:8-70) Radia 99.4 2.9E-13 2.1E-17 94.6 6.1 47 68-114 2-52 (63)
19 d1ug2a_ a.4.1.3 (A:) 2610100b2 99.4 4.5E-13 3.3E-17 100.3 7.3 70 47-116 13-85 (95)
20 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.3 1.3E-13 9.4E-18 95.5 3.0 51 8-59 6-59 (60)
21 d2ckxa1 a.4.1.3 (A:578-660) Te 99.3 7.7E-13 5.6E-17 97.4 6.7 54 68-121 1-59 (83)
22 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.3 4.8E-14 3.5E-18 99.0 -1.0 58 14-73 2-59 (65)
23 d2iw5b1 a.4.1.3 (B:376-440) RE 99.2 2.6E-12 1.9E-16 90.1 4.8 47 67-113 5-51 (65)
24 d1xc5a1 a.4.1.3 (A:413-480) Nu 99.2 2.9E-12 2.1E-16 90.7 4.4 47 66-112 16-62 (68)
25 d2cjja1 a.4.1.3 (A:8-70) Radia 99.2 2.1E-12 1.5E-16 90.2 1.1 44 15-59 2-48 (63)
26 d2iw5b1 a.4.1.3 (B:376-440) RE 99.0 5.9E-11 4.3E-15 83.0 1.5 46 14-61 5-50 (65)
27 d1xc5a1 a.4.1.3 (A:413-480) Nu 98.9 8.3E-11 6.1E-15 82.9 1.3 49 10-60 13-61 (68)
28 d1ug2a_ a.4.1.3 (A:) 2610100b2 98.7 2.1E-09 1.5E-13 80.1 1.5 51 9-60 28-80 (95)
29 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 98.4 1.4E-07 1E-11 64.3 4.1 45 68-113 2-50 (59)
30 d2crga1 a.4.1.3 (A:8-64) Metas 98.3 8.5E-07 6.2E-11 59.9 6.1 43 68-110 2-45 (57)
31 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 97.8 2E-06 1.5E-10 58.4 0.9 44 15-60 2-48 (59)
32 d2crga1 a.4.1.3 (A:8-64) Metas 97.8 2.9E-06 2.1E-10 57.1 1.7 43 16-60 3-46 (57)
33 d1x58a1 a.4.1.1 (A:8-56) Hypot 97.6 8E-05 5.8E-09 47.0 6.2 45 68-112 2-49 (49)
34 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 97.4 0.00011 8E-09 49.5 5.3 47 67-113 2-58 (59)
35 d1irza_ a.4.1.11 (A:) Arr10-B 97.0 0.0007 5.1E-08 46.2 5.9 45 67-111 7-56 (64)
36 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 96.6 0.00027 2E-08 47.5 1.2 48 14-62 2-58 (59)
37 d1irza_ a.4.1.11 (A:) Arr10-B 95.7 0.002 1.5E-07 43.8 2.1 48 13-60 6-56 (64)
38 d1wgxa_ a.4.1.3 (A:) Hypotheti 95.6 0.0048 3.5E-07 42.3 3.5 49 13-62 7-58 (73)
39 d1wgxa_ a.4.1.3 (A:) Hypotheti 95.6 0.0091 6.7E-07 40.8 4.9 48 67-114 8-59 (73)
40 d1x58a1 a.4.1.1 (A:8-56) Hypot 93.0 0.014 1E-06 36.4 1.2 45 14-59 1-47 (49)
41 d1ofcx2 a.4.1.13 (X:851-978) S 91.5 0.17 1.3E-05 38.3 6.0 55 63-117 45-115 (128)
42 d1ofcx1 a.4.1.3 (X:799-850) SA 91.2 0.36 2.6E-05 30.9 6.4 41 69-109 1-42 (52)
43 d1ofcx1 a.4.1.3 (X:799-850) SA 76.6 0.75 5.4E-05 29.3 2.4 38 16-54 1-38 (52)
44 d2cyya1 a.4.5.32 (A:5-64) Puta 74.1 2.8 0.0002 26.5 5.0 45 73-118 3-48 (60)
45 d1ofcx2 a.4.1.13 (X:851-978) S 72.9 1.3 9.1E-05 33.3 3.3 33 11-43 46-81 (128)
46 d2cg4a1 a.4.5.32 (A:4-66) Regu 71.4 1.7 0.00013 28.0 3.4 45 73-118 5-50 (63)
47 d1kkxa_ a.4.3.1 (A:) Transcrip 69.5 1.6 0.00011 31.1 3.1 41 77-117 38-86 (102)
48 d1rp3a2 a.4.13.2 (A:164-234) S 68.8 3.9 0.00028 26.2 4.8 40 74-114 25-64 (71)
49 d1i1ga1 a.4.5.32 (A:2-61) LprA 67.7 5.1 0.00037 25.3 5.2 44 74-118 4-48 (60)
50 d2cfxa1 a.4.5.32 (A:1-63) Tran 66.5 2.4 0.00018 27.3 3.3 45 73-118 5-50 (63)
51 d1c20a_ a.4.3.1 (A:) DNA-bindi 56.9 7 0.00051 28.5 4.8 41 76-116 55-108 (128)
52 d1or7a1 a.4.13.2 (A:120-187) S 53.8 11 0.00081 23.8 4.9 41 73-114 21-61 (68)
53 d1ryua_ a.4.3.1 (A:) SWI-SNF c 50.2 10 0.00074 27.3 4.7 40 76-115 53-104 (120)
54 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 46.5 4.9 0.00035 28.5 2.3 39 76-114 36-87 (107)
55 d1ryua_ a.4.3.1 (A:) SWI-SNF c 37.6 4.1 0.0003 29.6 0.6 41 23-63 53-103 (120)
56 d2bgxa1 a.20.1.1 (A:180-260) P 31.0 13 0.00094 25.1 2.3 69 14-87 13-81 (81)
57 d1vz0a1 a.4.14.1 (A:116-208) P 28.7 31 0.0022 23.5 4.1 38 71-109 4-41 (93)
58 d1fs1b1 a.157.1.1 (B:86-140) C 23.1 10 0.00074 23.7 0.5 19 90-108 36-54 (55)
59 d1igna2 a.4.1.6 (A:446-594) DN 20.9 31 0.0022 25.8 2.9 26 89-114 81-106 (149)
No 1
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=4.2e-21 Score=143.47 Aligned_cols=71 Identities=21% Similarity=0.283 Sum_probs=65.0
Q ss_pred cCCCCHHHHHHHHHHHHHhCCC-----CccccccccCccccccccccccccccCCCCcCCCCCHHHHHHHHHHHHHh
Q 024849 14 KGPWTADEDKKLVTFILTHGHC-----CWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLNEAEEQLVIDLHARL 85 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~-----~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~p~l~k~~WT~EED~~L~~lv~~~ 85 (261)
|++||+|||++|+++|.+||.. +|.+||+.|+ +||++|||+||.++|+|.+++++||.+||.+|+.++..+
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lp-gRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~~~~l 76 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVP-NHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNL 76 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTST-TSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTSCB
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcC-CCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHHhhcc
Confidence 6899999999999999999864 3999999998 999999999999999999999999999999988765443
No 2
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.9e-19 Score=122.26 Aligned_cols=52 Identities=40% Similarity=0.865 Sum_probs=49.8
Q ss_pred CccCCCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccccCCC
Q 024849 12 VKKGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPD 64 (261)
Q Consensus 12 ikkg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~p~ 64 (261)
++||+||+|||++|+++|.+||..+|..||+.|+ +||+.||++||.++|+|.
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qc~~Rw~~~L~P~ 52 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTST-TCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 5799999999999999999999889999999998 999999999999999984
No 3
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=2.1e-18 Score=114.65 Aligned_cols=47 Identities=51% Similarity=0.996 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIK 113 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~lk 113 (261)
+++||+|||.+|+++|++||++|+.||++|||||++|||+||+.++|
T Consensus 1 K~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHHHHhHcCCCCHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999999999999998875
No 4
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=8.8e-18 Score=113.92 Aligned_cols=50 Identities=34% Similarity=0.704 Sum_probs=47.2
Q ss_pred CcCCCCCHHHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 65 LKRGLLNEAEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 65 l~k~~WT~EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
+++|+||+|||.+|+++|.+|| .+|..||+.|+|||+.||++||+++|++
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qc~~Rw~~~L~P 51 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNP 51 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCC
Confidence 5789999999999999999999 5899999999999999999999998875
No 5
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=1.5e-18 Score=116.80 Aligned_cols=50 Identities=30% Similarity=0.696 Sum_probs=47.9
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccccCCC
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPD 64 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~p~ 64 (261)
|++||+|||++|+.+|.+||..+|.+||..|+ +|++.||++||.++|+|.
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~P~ 50 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLP-NRTDVQCQHRWQKVLNPE 50 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTST-TCCHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 68999999999999999999889999999998 999999999999999984
No 6
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=4.1e-17 Score=121.57 Aligned_cols=66 Identities=15% Similarity=0.319 Sum_probs=61.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCC------hhHHhccCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCcchhhh
Q 024849 67 RGLLNEAEEQLVIDLHARLGNR------WSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLQQQ 132 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~------W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k~~~~~~~~~~l~~~ 132 (261)
+++||+|||++|+++|.+||.+ |.+||+.|||||++|||+||+++|.+.+++..|+..+++.+...
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpgRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~ 72 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDD 72 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCCCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHH
Confidence 5789999999999999999964 99999999999999999999999999999999999999887654
No 7
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=1.3e-16 Score=107.18 Aligned_cols=48 Identities=25% Similarity=0.509 Sum_probs=45.3
Q ss_pred CCCCCHHHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
+++||+|||++|+++|.+|| ++|.+||..|+|||+.||++||+++|.+
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P 49 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNP 49 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCC
Confidence 57899999999999999999 5799999999999999999999999875
No 8
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.58 E-value=1e-16 Score=118.64 Aligned_cols=74 Identities=23% Similarity=0.373 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCcccccccc---Ccccccccccccccccc-----CCCCcCCCCCHHHHHHHHHHHHHhC
Q 024849 15 GPWTADEDKKLVTFILTHGHCCWRAVPKLA---GLRRCGKSCRLRWTNYL-----RPDLKRGLLNEAEEQLVIDLHARLG 86 (261)
Q Consensus 15 g~WT~eED~~L~~lv~~~g~~~W~~Ia~~~---~~~Rt~~qCr~Rw~~~L-----~p~l~k~~WT~EED~~L~~lv~~~G 86 (261)
.+||+|||++|+.+|.+||.++|..|++.+ .++||+.||++||.++| .|..+++.|+++| |+..|..++
T Consensus 1 r~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~~~~~~~p~e---ll~~v~~~~ 77 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQD---LLDRVLAAH 77 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHH---HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCcccccCCCCCHH---HHHHHHHHH
Confidence 489999999999999999998999999753 34899999999999988 4678889999877 455555556
Q ss_pred CChhH
Q 024849 87 NRWSK 91 (261)
Q Consensus 87 ~~W~~ 91 (261)
.+|++
T Consensus 78 ~~wsq 82 (83)
T d2ckxa1 78 AYWSQ 82 (83)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66764
No 9
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.4e-16 Score=107.13 Aligned_cols=54 Identities=24% Similarity=0.399 Sum_probs=48.5
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCCccccccccC-ccccccccccccccccCCCCc
Q 024849 13 KKGPWTADEDKKLVTFILTHGHCCWRAVPKLAG-LRRCGKSCRLRWTNYLRPDLK 66 (261)
Q Consensus 13 kkg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~-~~Rt~~qCr~Rw~~~L~p~l~ 66 (261)
++++||+|||++|+.+|.+||..+|..||+.++ .+|++.||++||.++++|+++
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~~~N 55 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 55 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCChHHHHHhhcCCCCcCHHHHHHHHHHHhcCCCC
Confidence 578999999999999999999889999998632 389999999999999998765
No 10
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.9e-15 Score=101.74 Aligned_cols=51 Identities=24% Similarity=0.387 Sum_probs=46.1
Q ss_pred cCCCCCHHHHHHHHHHHHHhC-CChhHHhcc--CCCCCHHHHHHHHHHHHHHHH
Q 024849 66 KRGLLNEAEEQLVIDLHARLG-NRWSKIAAR--LPGRTDNEIKNHWNTHIKKKL 116 (261)
Q Consensus 66 ~k~~WT~EED~~L~~lv~~~G-~~W~~IA~~--l~gRT~~q~k~Rw~~~lk~~~ 116 (261)
++.+||+|||.+|+++|++|| ++|+.||+. |++||+.||++||++++++.+
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~~~ 54 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGM 54 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCChHHHHHhhcCCCCcCHHHHHHHHHHHhcCCC
Confidence 467999999999999999999 589999997 569999999999999888753
No 11
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.9e-15 Score=100.13 Aligned_cols=48 Identities=29% Similarity=0.392 Sum_probs=43.5
Q ss_pred cCCCCCHHHHHHHHHHHHHhCC-ChhHHhccC--CCCCHHHHHHHHHHHHH
Q 024849 66 KRGLLNEAEEQLVIDLHARLGN-RWSKIAARL--PGRTDNEIKNHWNTHIK 113 (261)
Q Consensus 66 ~k~~WT~EED~~L~~lv~~~G~-~W~~IA~~l--~gRT~~q~k~Rw~~~lk 113 (261)
++++||+|||+.|+++|.+||. +|+.||+.+ .|||+.||++||+++.|
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~K 51 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHHHC
Confidence 4789999999999999999995 899999875 59999999999988764
No 12
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=7e-15 Score=103.42 Aligned_cols=54 Identities=24% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCCCCHHHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHHHHHHhhCC
Q 024849 67 RGLLNEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k~~ 120 (261)
...||+|||.+|+++|.+||.+|..||++||+||+.||++||+.++++..+...
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~ry~~~~~~~~k~~~ 55 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGL 55 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHHSCSCT
T ss_pred CCCCCHHHHHHHHHHHHHhcchHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCC
Confidence 357999999999999999999999999999999999999999999988765544
No 13
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=5e-15 Score=98.07 Aligned_cols=46 Identities=24% Similarity=0.520 Sum_probs=43.7
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCccccccccCcccccccccccccccc
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L 61 (261)
|++||+|||+.|+.+|++||. +|..||+.|+ +||+.||+.||.++|
T Consensus 1 K~~WT~eED~~L~~~v~~~G~-~W~~Ia~~~~-gRt~~~~knr~~~~l 46 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGN-RWAEIAKLLP-GRTDNAIKNHWNSTM 46 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSS-CHHHHHTTCT-TCCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHhh-HHHHHHhHcC-CCCHHHHHHHHHHHc
Confidence 689999999999999999997 8999999998 999999999999876
No 14
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.2e-15 Score=98.98 Aligned_cols=44 Identities=23% Similarity=0.576 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccc
Q 024849 16 PWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60 (261)
Q Consensus 16 ~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~ 60 (261)
.||+|||++|+++|++||..+|..||+.|+ +||+.||+.||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~-~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMC-TKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHT-TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 599999999999999999889999999999 99999999999876
No 15
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.2e-15 Score=100.43 Aligned_cols=49 Identities=22% Similarity=0.340 Sum_probs=44.0
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCCccccccccC-cccccccccccccccc
Q 024849 13 KKGPWTADEDKKLVTFILTHGHCCWRAVPKLAG-LRRCGKSCRLRWTNYL 61 (261)
Q Consensus 13 kkg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~-~~Rt~~qCr~Rw~~~L 61 (261)
++++||+|||++|+++|.+||.++|..||+.++ .+|++.||++||.++.
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~ 50 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 50 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence 589999999999999999999889999997643 3799999999999864
No 16
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.3e-14 Score=94.01 Aligned_cols=43 Identities=19% Similarity=0.377 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHHHH
Q 024849 69 LLNEAEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWNTH 111 (261)
Q Consensus 69 ~WT~EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~~~ 111 (261)
.||.|||.+|+++|++|| ++|..||+.|+|||+.||+.||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcCCCCHHHHHHHHHHh
Confidence 499999999999999999 5799999999999999999999864
No 17
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=5.8e-14 Score=97.32 Aligned_cols=50 Identities=14% Similarity=0.254 Sum_probs=45.5
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHhCC----ChhHHhccCCCCCHHHHHHHHHHH
Q 024849 62 RPDLKRGLLNEAEEQLVIDLHARLGN----RWSKIAARLPGRTDNEIKNHWNTH 111 (261)
Q Consensus 62 ~p~l~k~~WT~EED~~L~~lv~~~G~----~W~~IA~~l~gRT~~q~k~Rw~~~ 111 (261)
.+...+++||+|||.+|+++|.+||. +|.+||+.|||||..||++||+.+
T Consensus 7 ~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 7 RARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLL 60 (60)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHH
T ss_pred cCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 45677889999999999999999995 599999999999999999999764
No 18
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.37 E-value=2.9e-13 Score=94.59 Aligned_cols=47 Identities=23% Similarity=0.434 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHHHHhCC----ChhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 68 GLLNEAEEQLVIDLHARLGN----RWSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 68 ~~WT~EED~~L~~lv~~~G~----~W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
.+||+|||.+|++++++||. +|.+||..|||||..||++||+.+++.
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~gRt~~qc~~r~~~L~~d 52 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 52 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 57999999999999999995 499999999999999999999776654
No 19
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=4.5e-13 Score=100.32 Aligned_cols=70 Identities=11% Similarity=0.177 Sum_probs=62.9
Q ss_pred cccccccccccccccCCCCcCCCCCHHHHHHHHHHHHHhCCC---hhHHhccCCCCCHHHHHHHHHHHHHHHH
Q 024849 47 RRCGKSCRLRWTNYLRPDLKRGLLNEAEEQLVIDLHARLGNR---WSKIAARLPGRTDNEIKNHWNTHIKKKL 116 (261)
Q Consensus 47 ~Rt~~qCr~Rw~~~L~p~l~k~~WT~EED~~L~~lv~~~G~~---W~~IA~~l~gRT~~q~k~Rw~~~lk~~~ 116 (261)
..+..+...++.+..++......||.|||++|++.++++|.+ |..||+.|+|||++|||+||+.+++-.-
T Consensus 13 ~~t~~~v~A~n~~~~s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~~Rs~~qvr~Rf~~Lm~lf~ 85 (95)
T d1ug2a_ 13 KASEATVCANNSKVSSTGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLFH 85 (95)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCccccccccCccCCCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 566777888888888888888899999999999999999977 9999999999999999999998887654
No 20
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.3e-13 Score=95.50 Aligned_cols=51 Identities=18% Similarity=0.470 Sum_probs=46.6
Q ss_pred cCCCCccCCCCHHHHHHHHHHHHHhCCC---CccccccccCcccccccccccccc
Q 024849 8 DKLGVKKGPWTADEDKKLVTFILTHGHC---CWRAVPKLAGLRRCGKSCRLRWTN 59 (261)
Q Consensus 8 ~kp~ikkg~WT~eED~~L~~lv~~~g~~---~W~~Ia~~~~~~Rt~~qCr~Rw~~ 59 (261)
.++...+++||+|||++|+++|..||.. +|.+||+.|| +||+.||+.||..
T Consensus 6 ~~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~-~Rt~~qc~~R~~~ 59 (60)
T d2cqra1 6 ERARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP-SKSKEDCIARYKL 59 (60)
T ss_dssp CTTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS-SSCHHHHHHHHHH
T ss_pred ccCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 5677889999999999999999999865 4999999999 9999999999964
No 21
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.34 E-value=7.7e-13 Score=97.37 Aligned_cols=54 Identities=24% Similarity=0.433 Sum_probs=47.0
Q ss_pred CCCCHHHHHHHHHHHHHhCC-ChhHHhcc----CCCCCHHHHHHHHHHHHHHHHhhCCC
Q 024849 68 GLLNEAEEQLVIDLHARLGN-RWSKIAAR----LPGRTDNEIKNHWNTHIKKKLIKMGI 121 (261)
Q Consensus 68 ~~WT~EED~~L~~lv~~~G~-~W~~IA~~----l~gRT~~q~k~Rw~~~lk~~~~k~~~ 121 (261)
.|||.|||.+|+++|.+||. +|+.|++. +++||+.|||+||+++|+.......+
T Consensus 1 r~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~ 59 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQ 59 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGG
T ss_pred CCCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCccc
Confidence 38999999999999999994 89999975 68999999999999999876544433
No 22
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=4.8e-14 Score=99.03 Aligned_cols=58 Identities=24% Similarity=0.407 Sum_probs=51.5
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccccCCCCcCCCCCHH
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLNEA 73 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~p~l~k~~WT~E 73 (261)
..+||+|||++|+++|..||. +|..||++|+ +||+.||+.||.+++.+..+.+.+...
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~-~W~~Ia~~~~-~Rt~~q~k~ry~~~~~~~~k~~~~~~~ 59 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGR-RWTKISKLIG-SRTVLQVKSYARQYFKNKVKCGLDKET 59 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCS-CHHHHHHHHS-SSCHHHHHHHHHHHHHHHSCSCTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHhcc-hHHHHHHHcC-CCCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 367999999999999999995 9999999999 999999999999999887777665543
No 23
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=2.6e-12 Score=90.12 Aligned_cols=47 Identities=13% Similarity=0.243 Sum_probs=43.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIK 113 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~lk 113 (261)
+.+||++|+.+|++++.+||.+|..||+.|||||..||++||+.+.+
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRR 51 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCchHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 35799999999999999999999999999999999999999987654
No 24
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.9e-12 Score=90.66 Aligned_cols=47 Identities=15% Similarity=0.077 Sum_probs=43.3
Q ss_pred cCCCCCHHHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHH
Q 024849 66 KRGLLNEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHI 112 (261)
Q Consensus 66 ~k~~WT~EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~l 112 (261)
...+||+||+.+|++++.+||.+|..||..|||||..||++||+...
T Consensus 16 ~~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~rt~~q~~~~yy~~k 62 (68)
T d1xc5a1 16 VMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTK 62 (68)
T ss_dssp TTTCCCTTTHHHHHHHHHHTTSCSSSHHHHTTTSCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 44689999999999999999999999999999999999999997543
No 25
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.17 E-value=2.1e-12 Score=90.17 Aligned_cols=44 Identities=18% Similarity=0.388 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCCC---ccccccccCcccccccccccccc
Q 024849 15 GPWTADEDKKLVTFILTHGHCC---WRAVPKLAGLRRCGKSCRLRWTN 59 (261)
Q Consensus 15 g~WT~eED~~L~~lv~~~g~~~---W~~Ia~~~~~~Rt~~qCr~Rw~~ 59 (261)
.+||+|||++|+++|..||... |.+||..|+ +||+.||+.||..
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~-gRt~~qc~~r~~~ 48 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVE-GRTPEEVKKHYEI 48 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST-TCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 5799999999999999998754 999999999 9999999999953
No 26
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=5.9e-11 Score=82.96 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=42.9
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCccccccccCcccccccccccccccc
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L 61 (261)
..+||++||++|..++..||. +|..||+.|+ +||+.||+.+|.++.
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~-~w~~Ia~~~~-~kt~~q~~~~y~~~~ 50 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGR-DFQAISDVIG-NKSVVQVKNFFVNYR 50 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSS-CHHHHHHHHS-SCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCc-hHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 467999999999999999995 8999999999 999999999998865
No 27
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=8.3e-11 Score=82.94 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=43.8
Q ss_pred CCCccCCCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccc
Q 024849 10 LGVKKGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60 (261)
Q Consensus 10 p~ikkg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~ 60 (261)
+.....+||+|||++|+.+|..||. +|..||+.|+ +||..||+.+|...
T Consensus 13 ~~~~~~~WT~eE~~~f~~~~~~~G~-~w~~Ia~~~~-~rt~~q~~~~yy~~ 61 (68)
T d1xc5a1 13 DRQVMNMWSEQEKETFREKFMQHPK-NFGLIASFLE-RKTVAECVLYYYLT 61 (68)
T ss_dssp STTTTTCCCTTTHHHHHHHHHHTTS-CSSSHHHHTT-TSCHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHCC-cHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 3445678999999999999999995 9999999998 99999999999754
No 28
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.67 E-value=2.1e-09 Score=80.10 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=44.9
Q ss_pred CCCCccCCCCHHHHHHHHHHHHHhCCCC--ccccccccCccccccccccccccc
Q 024849 9 KLGVKKGPWTADEDKKLVTFILTHGHCC--WRAVPKLAGLRRCGKSCRLRWTNY 60 (261)
Q Consensus 9 kp~ikkg~WT~eED~~L~~lv~~~g~~~--W~~Ia~~~~~~Rt~~qCr~Rw~~~ 60 (261)
+++.+...||.|||..|+..++++|... |..||+.|+ +|++.||+.||...
T Consensus 28 s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~-~Rs~~qvr~Rf~~L 80 (95)
T d1ug2a_ 28 STGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLG-NKTPVEVSHRFREL 80 (95)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred CCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 3566788999999999999999999633 999999998 99999999999653
No 29
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=1.4e-07 Score=64.34 Aligned_cols=45 Identities=20% Similarity=0.313 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHHHHHHHhC----CChhHHhccCCCCCHHHHHHHHHHHHH
Q 024849 68 GLLNEAEEQLVIDLHARLG----NRWSKIAARLPGRTDNEIKNHWNTHIK 113 (261)
Q Consensus 68 ~~WT~EED~~L~~lv~~~G----~~W~~IA~~l~gRT~~q~k~Rw~~~lk 113 (261)
..||.+|+.+|.+++.+|+ .+|.+||..+ |||..+|..||+.+..
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v-gkt~~ev~~~~k~l~e 50 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKD 50 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4799999999999999996 5699999999 9999999999975543
No 30
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.26 E-value=8.5e-07 Score=59.87 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCChhHHhcc-CCCCCHHHHHHHHHH
Q 024849 68 GLLNEAEEQLVIDLHARLGNRWSKIAAR-LPGRTDNEIKNHWNT 110 (261)
Q Consensus 68 ~~WT~EED~~L~~lv~~~G~~W~~IA~~-l~gRT~~q~k~Rw~~ 110 (261)
..||+||-.+..+++.+||.+|..|++. +|+||..+|.+.|..
T Consensus 2 d~WT~eE~~~F~~~~~~yGKdf~~I~~~~v~~Ks~~~~v~fYY~ 45 (57)
T d2crga1 2 EEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYM 45 (57)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccHHHHHHHHcCCCCHHHHHHHHHH
Confidence 3699999999999999999999999985 699999999999864
No 31
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=2e-06 Score=58.45 Aligned_cols=44 Identities=14% Similarity=0.282 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHHHHHHHhCC---CCccccccccCccccccccccccccc
Q 024849 15 GPWTADEDKKLVTFILTHGH---CCWRAVPKLAGLRRCGKSCRLRWTNY 60 (261)
Q Consensus 15 g~WT~eED~~L~~lv~~~g~---~~W~~Ia~~~~~~Rt~~qCr~Rw~~~ 60 (261)
+.||.+|+.+|.+++.+|+. ..|.+||+.+| |+..+|..||...
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~vg--kt~~ev~~~~k~l 48 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELG--RSVTDVTTKAKQL 48 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHT--SCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 57999999999999999953 35999999996 9999999999754
No 32
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.80 E-value=2.9e-06 Score=57.12 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCccccccc-cCccccccccccccccc
Q 024849 16 PWTADEDKKLVTFILTHGHCCWRAVPKL-AGLRRCGKSCRLRWTNY 60 (261)
Q Consensus 16 ~WT~eED~~L~~lv~~~g~~~W~~Ia~~-~~~~Rt~~qCr~Rw~~~ 60 (261)
.||+||-.++.+++..||. +|..|++. ++ +|+..||...|...
T Consensus 3 ~WT~eE~~~F~~~~~~yGK-df~~I~~~~v~-~Ks~~~~v~fYY~~ 46 (57)
T d2crga1 3 EWSASEACLFEEALEKYGK-DFNDIRQDFLP-WKSLTSIIEYYYMW 46 (57)
T ss_dssp CCCHHHHHHHHHHHHHTCS-CHHHHHHTTCS-SSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcc-cHHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 6999999999999999996 99999975 56 99999999988653
No 33
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.61 E-value=8e-05 Score=47.04 Aligned_cols=45 Identities=18% Similarity=0.366 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHHHHHHHhCCChhHHhccC---CCCCHHHHHHHHHHHH
Q 024849 68 GLLNEAEEQLVIDLHARLGNRWSKIAARL---PGRTDNEIKNHWNTHI 112 (261)
Q Consensus 68 ~~WT~EED~~L~~lv~~~G~~W~~IA~~l---~gRT~~q~k~Rw~~~l 112 (261)
..||.||-.-|...|+++|+.|..|-=.+ |||+...+..+|+.++
T Consensus 2 knft~eEv~YL~~GVK~~G~~WNsILWs~PF~~GR~~vdLA~Ky~~l~ 49 (49)
T d1x58a1 2 KDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLI 49 (49)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcchhhhhhhccCCCCCchhhHHHHHHHhhC
Confidence 46999999999999999999999996543 8999999999998753
No 34
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.41 E-value=0.00011 Score=49.55 Aligned_cols=47 Identities=15% Similarity=0.371 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHHHHHHHhC--------CC-hhHHhc-cCCCCCHHHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLG--------NR-WSKIAA-RLPGRTDNEIKNHWNTHIK 113 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G--------~~-W~~IA~-~l~gRT~~q~k~Rw~~~lk 113 (261)
+.+||.|||+.|++.|+++. +. |.+.++ .++.+|-.+.|+||...|+
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc
Confidence 46899999999999999873 22 999995 6799999999999988765
No 35
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.99 E-value=0.0007 Score=46.18 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=38.3
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCh---hHHhcc--CCCCCHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLGNRW---SKIAAR--LPGRTDNEIKNHWNTH 111 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~W---~~IA~~--l~gRT~~q~k~Rw~~~ 111 (261)
+-.||+||-.+.++++..+|..| ..|... ++|+|..||+.|-+.+
T Consensus 7 R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKY 56 (64)
T d1irza_ 7 RVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 45699999999999999999877 467666 4999999999987655
No 36
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60 E-value=0.00027 Score=47.54 Aligned_cols=48 Identities=21% Similarity=0.393 Sum_probs=39.1
Q ss_pred cCCCCHHHHHHHHHHHHHhCCC--------Ccccccc-ccCccccccccccccccccC
Q 024849 14 KGPWTADEDKKLVTFILTHGHC--------CWRAVPK-LAGLRRCGKSCRLRWTNYLR 62 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~--------~W~~Ia~-~~~~~Rt~~qCr~Rw~~~L~ 62 (261)
+.+||.+||+.|+..|..+... =|+..++ .++ .+|..+-|+||.++|.
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~-~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLT-QHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSS-SCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCC-CCCHHHHHHHHHHHhc
Confidence 5789999999999999998422 2888885 444 8999999999988764
No 37
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.74 E-value=0.002 Score=43.80 Aligned_cols=48 Identities=10% Similarity=0.134 Sum_probs=36.1
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCCc--cccccccC-ccccccccccccccc
Q 024849 13 KKGPWTADEDKKLVTFILTHGHCCW--RAVPKLAG-LRRCGKSCRLRWTNY 60 (261)
Q Consensus 13 kkg~WT~eED~~L~~lv~~~g~~~W--~~Ia~~~~-~~Rt~~qCr~Rw~~~ 60 (261)
.+-.||+||.++...+|..+|...| ..|...|+ .++|..|++-+-+.|
T Consensus 6 ~R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKY 56 (64)
T d1irza_ 6 PRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4678999999999999999997444 46666653 367888887665544
No 38
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.58 E-value=0.0048 Score=42.26 Aligned_cols=49 Identities=20% Similarity=0.386 Sum_probs=42.2
Q ss_pred ccCCCCHHHHHHHHHHHHHhC---CCCccccccccCccccccccccccccccC
Q 024849 13 KKGPWTADEDKKLVTFILTHG---HCCWRAVPKLAGLRRCGKSCRLRWTNYLR 62 (261)
Q Consensus 13 kkg~WT~eED~~L~~lv~~~g---~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~ 62 (261)
.-+.|+.+|=++|..++.... .+-|..||..+| .|++..|...|...+.
T Consensus 7 ~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VG-tRSaeECQ~ky~~~~~ 58 (73)
T d1wgxa_ 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVG-SRSPEECQRKYMENPR 58 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTT-TSCHHHHHHHHHHSSS
T ss_pred cccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHc-cCCHHHHHHHHHhCcc
Confidence 457999999999999998764 345999999999 9999999999987654
No 39
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.56 E-value=0.0091 Score=40.81 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=41.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCC----hhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 67 RGLLNEAEEQLVIDLHARLGNR----WSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 67 k~~WT~EED~~L~~lv~~~G~~----W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
.+.|+++|=++|-.++..+... |..||..+..||+..|..+|...++.
T Consensus 8 d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VGtRSaeECQ~ky~~~~~~ 59 (73)
T d1wgxa_ 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPRG 59 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSSS
T ss_pred ccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHccCCHHHHHHHHHhCccc
Confidence 4589999999999999988743 99999999999999999999865443
No 40
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.04 E-value=0.014 Score=36.42 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=35.9
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCcccccccc--Ccccccccccccccc
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLA--GLRRCGKSCRLRWTN 59 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~--~~~Rt~~qCr~Rw~~ 59 (261)
+..||.||-.-|...|+++|. .|+.|-=.. .+||+......+|++
T Consensus 1 Rknft~eEv~YL~~GVK~~G~-~WNsILWs~PF~~GR~~vdLA~Ky~~ 47 (49)
T d1x58a1 1 RKDFTKEEVNYLFHGVKTMGN-HWNSILWSFPFQKGRRAVDLAHKYHR 47 (49)
T ss_dssp SSSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCCCTTCCHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHhcc-hhhhhhhccCCCCCchhhHHHHHHHh
Confidence 457999999999999999996 899997433 257887777766654
No 41
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.50 E-value=0.17 Score=38.34 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=43.8
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHhC-CC---hhHHhccC------------CCCCHHHHHHHHHHHHHHHHh
Q 024849 63 PDLKRGLLNEAEEQLVIDLHARLG-NR---WSKIAARL------------PGRTDNEIKNHWNTHIKKKLI 117 (261)
Q Consensus 63 p~l~k~~WT~EED~~L~~lv~~~G-~~---W~~IA~~l------------~gRT~~q~k~Rw~~~lk~~~~ 117 (261)
+..++..+|.|||.-|+-++.+|| .+ |.+|-..+ ..||+..+..|.+.+++-..+
T Consensus 45 ~~nk~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~tLi~~i~k 115 (128)
T d1ofcx2 45 GNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIER 115 (128)
T ss_dssp TTCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHHHHHHHHHH
Confidence 344555799999999999999999 44 88874332 469999999999998886544
No 42
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.21 E-value=0.36 Score=30.86 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHH
Q 024849 69 LLNEAEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWN 109 (261)
Q Consensus 69 ~WT~EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~ 109 (261)
.|+.-|=..++.+..+|| .+-..||..|.|+|...|+.-.+
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~~~Kt~eEV~~Y~~ 42 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNA 42 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCHHHHHHHHH
Confidence 499999999999999999 57999999999999999876443
No 43
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=76.62 E-value=0.75 Score=29.27 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCCccccccccCccccccccc
Q 024849 16 PWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCR 54 (261)
Q Consensus 16 ~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr 54 (261)
.|+..|=+.++.+..+||..+-..||..|. +++...++
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~~-~Kt~eEV~ 38 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDVE-GKTPEEVI 38 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSST-TCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhc-CCCHHHHH
Confidence 499999999999999999889999999996 68776654
No 44
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=74.14 E-value=2.8 Score=26.54 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCC-ChhHHhccCCCCCHHHHHHHHHHHHHHHHhh
Q 024849 73 AEEQLVIDLHARLGN-RWSKIAARLPGRTDNEIKNHWNTHIKKKLIK 118 (261)
Q Consensus 73 EED~~L~~lv~~~G~-~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k 118 (261)
+-|.+|+.+.++-+. .+.+||+.+ |-|...|..|.+.+.+..+.+
T Consensus 3 ~~D~~Il~~L~~n~r~s~~eiA~~l-~ls~~~v~~Ri~~L~~~giI~ 48 (60)
T d2cyya1 3 EIDKKIIKILQNDGKAPLREISKIT-GLAESTIHERIRKLRESGVIK 48 (60)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHH-CSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 447888888888774 699999999 899999999999888887655
No 45
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=72.89 E-value=1.3 Score=33.32 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=27.6
Q ss_pred CCccCCCCHHHHHHHHHHHHHhCCCC---ccccccc
Q 024849 11 GVKKGPWTADEDKKLVTFILTHGHCC---WRAVPKL 43 (261)
Q Consensus 11 ~ikkg~WT~eED~~L~~lv~~~g~~~---W~~Ia~~ 43 (261)
+-++..+|.|||.-|+-.+-+||.++ |.+|-..
T Consensus 46 ~nk~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~ 81 (128)
T d1ofcx2 46 NNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAA 81 (128)
T ss_dssp TCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 44566799999999999999999988 8777543
No 46
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=71.41 E-value=1.7 Score=27.97 Aligned_cols=45 Identities=9% Similarity=0.178 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHHHHHHHHHhh
Q 024849 73 AEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWNTHIKKKLIK 118 (261)
Q Consensus 73 EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k 118 (261)
+=|.+|+.+.++-| -...+||+.+ |-|...|+.|.+.+.+..+.+
T Consensus 5 ~~D~~IL~~L~~~~r~s~~eiA~~l-~ls~~~v~~Ri~rL~~~GiI~ 50 (63)
T d2cg4a1 5 NLDRGILEALMGNARTAYAELAKQF-GVSPETIHVRVEKMKQAGIIT 50 (63)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHH-TSCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 34788888888877 4699999999 999999999999888876544
No 47
>d1kkxa_ a.4.3.1 (A:) Transcription regulator Adr6 (Swi1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.48 E-value=1.6 Score=31.15 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=33.5
Q ss_pred HHHHHHHHhCC--------ChhHHhccCCCCCHHHHHHHHHHHHHHHHh
Q 024849 77 LVIDLHARLGN--------RWSKIAARLPGRTDNEIKNHWNTHIKKKLI 117 (261)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~ 117 (261)
.|..+|.++|+ .|.+||..|.--...++|..|..+|.+--+
T Consensus 38 ~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~lr~~Y~~~L~~yE~ 86 (102)
T d1kkxa_ 38 YLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPYER 86 (102)
T ss_dssp HHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHhcccCcHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 56777777773 399999999767889999999999988644
No 48
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=68.83 E-value=3.9 Score=26.16 Aligned_cols=40 Identities=18% Similarity=0.131 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 74 EEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 74 ED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
.+..++.++--.|-...+||..| |-|...|+.|....+++
T Consensus 25 ~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~~~ra~~~ 64 (71)
T d1rp3a2 25 REKLVIQLIFYEELPAKEVAKIL-ETSVSRVSQLKAKALER 64 (71)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhCCHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 34556666666688899999999 99999999998876655
No 49
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.74 E-value=5.1 Score=25.29 Aligned_cols=44 Identities=14% Similarity=0.426 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCC-ChhHHhccCCCCCHHHHHHHHHHHHHHHHhh
Q 024849 74 EEQLVIDLHARLGN-RWSKIAARLPGRTDNEIKNHWNTHIKKKLIK 118 (261)
Q Consensus 74 ED~~L~~lv~~~G~-~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k 118 (261)
-|.+|+.+.++-|. ...+||+.+ |=+...|..|.+.+.+..+.+
T Consensus 4 ~D~kIl~~L~~n~r~s~~~lA~~~-gls~~~v~~Ri~~L~~~giI~ 48 (60)
T d1i1ga1 4 RDKIILEILEKDARTPFTEIAKKL-GISETAVRKRVKALEEKGIIE 48 (60)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHH-TSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 47888888888774 699999999 889999999999888887664
No 50
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=66.51 E-value=2.4 Score=27.27 Aligned_cols=45 Identities=7% Similarity=0.034 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhC-CChhHHhccCCCCCHHHHHHHHHHHHHHHHhh
Q 024849 73 AEEQLVIDLHARLG-NRWSKIAARLPGRTDNEIKNHWNTHIKKKLIK 118 (261)
Q Consensus 73 EED~~L~~lv~~~G-~~W~~IA~~l~gRT~~q~k~Rw~~~lk~~~~k 118 (261)
+=|.+|+.+.++.| -..++||+.+ |-|...|..|.+.+.+..+.+
T Consensus 5 ~~D~~IL~~L~~n~r~s~~~iA~~l-gis~~tv~~Ri~~L~~~giI~ 50 (63)
T d2cfxa1 5 QIDLNIIEELKKDSRLSMRELGRKI-KLSPPSVTERVRQLESFGIIK 50 (63)
T ss_dssp HHHHHHHHHHHHCSCCCHHHHHHHH-TCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCee
Confidence 34788888888877 4599999999 999999999998888776554
No 51
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=56.90 E-value=7 Score=28.55 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCC--------ChhHHhccCC--CC--C-HHHHHHHHHHHHHHHH
Q 024849 76 QLVIDLHARLGN--------RWSKIAARLP--GR--T-DNEIKNHWNTHIKKKL 116 (261)
Q Consensus 76 ~~L~~lv~~~G~--------~W~~IA~~l~--gR--T-~~q~k~Rw~~~lk~~~ 116 (261)
-.|..+|.+.|+ .|.+||+.|. .. + ..++|+.|..+|-+.-
T Consensus 55 ~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~~L~~~Y~k~L~~fE 108 (128)
T d1c20a_ 55 YELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYE 108 (128)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHhcCHHHhcccccHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 568888888883 5999999983 22 2 5578999999888643
No 52
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=53.78 E-value=11 Score=23.80 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 73 AEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 73 EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
++...++.+.-..|-.-.+||..+ |-+...|+.|.+..+++
T Consensus 21 ~~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~l~ra~~~ 61 (68)
T d1or7a1 21 EDLRMAITLRELDGLSYEEIAAIM-DCPVGTVRSRIFRAREA 61 (68)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 344555666666677899999999 99999999999876654
No 53
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.22 E-value=10 Score=27.34 Aligned_cols=40 Identities=13% Similarity=0.278 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCC--------ChhHHhccC--CCCCH--HHHHHHHHHHHHHH
Q 024849 76 QLVIDLHARLGN--------RWSKIAARL--PGRTD--NEIKNHWNTHIKKK 115 (261)
Q Consensus 76 ~~L~~lv~~~G~--------~W~~IA~~l--~gRT~--~q~k~Rw~~~lk~~ 115 (261)
-.|..+|.++|+ +|.+||+.| +.=+. .++|+.|..+|.+.
T Consensus 53 ~~Ly~~V~~~GG~~~V~~~~~W~~Va~~l~~~~~~~~~~~Lk~~Y~r~L~~y 104 (120)
T d1ryua_ 53 YRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAF 104 (120)
T ss_dssp HHHHHHHHHHTCTTGGGTSSHHHHHHHHTTSCCSSHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhcCHHhhcccchHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 567788888873 499999988 32232 36888888887764
No 54
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.49 E-value=4.9 Score=28.53 Aligned_cols=39 Identities=18% Similarity=0.338 Sum_probs=29.2
Q ss_pred HHHHHHHHHhC--------CChhHHhccCC--CC---CHHHHHHHHHHHHHH
Q 024849 76 QLVIDLHARLG--------NRWSKIAARLP--GR---TDNEIKNHWNTHIKK 114 (261)
Q Consensus 76 ~~L~~lv~~~G--------~~W~~IA~~l~--gR---T~~q~k~Rw~~~lk~ 114 (261)
-.|..+|.+.| +.|..||+.|. .. ...++|+.|..+|-+
T Consensus 36 ~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~~~~~~~Lk~~Y~~~L~~ 87 (107)
T d1ig6a_ 36 WTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILP 87 (107)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHhCChhhccccccHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 56788888888 35999999872 22 145889999988854
No 55
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.58 E-value=4.1 Score=29.61 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCCC-------CccccccccCccccc---cccccccccccCC
Q 024849 23 KKLVTFILTHGHC-------CWRAVPKLAGLRRCG---KSCRLRWTNYLRP 63 (261)
Q Consensus 23 ~~L~~lv~~~g~~-------~W~~Ia~~~~~~Rt~---~qCr~Rw~~~L~p 63 (261)
-+|..+|.+.|.- .|..||..++..... .+.+..|.++|.|
T Consensus 53 ~~Ly~~V~~~GG~~~V~~~~~W~~Va~~l~~~~~~~~~~~Lk~~Y~r~L~~ 103 (120)
T d1ryua_ 53 YRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYA 103 (120)
T ss_dssp HHHHHHHHHHTCTTGGGTSSHHHHHHHHTTSCCSSHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCHHhhcccchHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 3677777777532 499999887633221 2456667777665
No 56
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.04 E-value=13 Score=25.14 Aligned_cols=69 Identities=17% Similarity=0.257 Sum_probs=48.8
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCccccccccCccccccccccccccccCCCCcCCCCCHHHHHHHHHHHHHhCC
Q 024849 14 KGPWTADEDKKLVTFILTHGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLNEAEEQLVIDLHARLGN 87 (261)
Q Consensus 14 kg~WT~eED~~L~~lv~~~g~~~W~~Ia~~~~~~Rt~~qCr~Rw~~~L~p~l~k~~WT~EED~~L~~lv~~~G~ 87 (261)
+...++-|...+.....+||.. |..... .+..+....-++.+..|....|....|--.+|..|+++||.
T Consensus 13 ~~~~~~~~~~~~~~~L~k~GY~----i~~~~~-~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~~L~~KY~~ 81 (81)
T d2bgxa1 13 RAPHTPVDTASLLELLARYGYD----VKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQ 81 (81)
T ss_dssp CCTTCBCCHHHHHHHHHHHTCC----CCTTCC-HHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHHHHHHHHCC
T ss_pred cCCCCchhHHHHHHHHHHcCCC----CCCCCC-cHHHHHHHHHHHHHccccccCCcCCHHHHHHHHHHHHHHcC
Confidence 3444556677888999999972 221111 12224444567777889999999999999999999999984
No 57
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=28.66 E-value=31 Score=23.50 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHhCCChhHHhccCCCCCHHHHHHHHH
Q 024849 71 NEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWN 109 (261)
Q Consensus 71 T~EED~~L~~lv~~~G~~W~~IA~~l~gRT~~q~k~Rw~ 109 (261)
|+=|+..=++....||..-.+||+.+ |++...|.+|-.
T Consensus 4 ~piEeA~a~~~L~e~g~t~~~iA~~~-Gks~~~V~~~Lr 41 (93)
T d1vz0a1 4 SPVEEARGYQALLEMGLTQEEVARRV-GKARSTVANALR 41 (93)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHH-TCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHH-ccchHHHHHHHH
Confidence 34344443333347999999999999 999999999875
No 58
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.13 E-value=10 Score=23.74 Aligned_cols=19 Identities=26% Similarity=0.567 Sum_probs=16.9
Q ss_pred hHHhccCCCCCHHHHHHHH
Q 024849 90 SKIAARLPGRTDNEIKNHW 108 (261)
Q Consensus 90 ~~IA~~l~gRT~~q~k~Rw 108 (261)
..||..+.|+|..++|..|
T Consensus 36 ~~vA~~ikgKt~eeiR~~f 54 (55)
T d1fs1b1 36 KTVANMIKGKTPEEIRKTF 54 (55)
T ss_dssp HHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHh
Confidence 5889999999999999876
No 59
>d1igna2 a.4.1.6 (A:446-594) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.91 E-value=31 Score=25.81 Aligned_cols=26 Identities=12% Similarity=0.316 Sum_probs=23.4
Q ss_pred hhHHhccCCCCCHHHHHHHHHHHHHH
Q 024849 89 WSKIAARLPGRTDNEIKNHWNTHIKK 114 (261)
Q Consensus 89 W~~IA~~l~gRT~~q~k~Rw~~~lk~ 114 (261)
...+++..|..|.++-|.||+..+..
T Consensus 81 Fk~~a~~~P~HT~~sWRDRfRKfv~~ 106 (149)
T d1igna2 81 FKHFAEEHAAHTENAWRDRFRKFLLA 106 (149)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHTHHH
T ss_pred HHHHHHhCcccchhhHHHHHHHHHHh
Confidence 67889999999999999999988775
Done!