BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024853
(261 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135739|ref|XP_002327292.1| predicted protein [Populus trichocarpa]
gi|222835662|gb|EEE74097.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 145/253 (57%), Gaps = 42/253 (16%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
GETLTSISKQYGVS+YS+AA NKNI+DVDLVFEGQ LNIP++ Q + +
Sbjct: 74 GETLTSISKQYGVSIYSVAAANKNILDVDLVFEGQLLNIPAAAPAGTQV--------YQI 125
Query: 67 KEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLNIFYGPLDKKY 126
K+ PSFD E LQ+ + I G L++K
Sbjct: 126 KKCES-------------------------------PSFDQLERLQNFMKIMDGVLNQKP 154
Query: 127 FVMEITHGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSK 186
F+ T LP AK TGYFLV+VP +AFCIRC+IGAFHTR G + +N S+ H +
Sbjct: 155 FITVTTLRLPHAKATGYFLVLVPALAFCIRCIIGAFHTRARRNLGCQASNESRRHHDVPE 214
Query: 187 SVRWKSALRDIIEEDLDSGSRPRTNDPVEEQDQAQPLISFEESSHAYRKLEDDYEKFLSE 246
S RWK AL DI E D G P N DQ Q SFEE SHAY KLE +Y+KFLSE
Sbjct: 215 SKRWKHALSDIREPDNLDG-EPILNSTGTSADQDQN--SFEEVSHAYDKLEHEYQKFLSE 271
Query: 247 CGMSKWGYWRGGS 259
CG+S GYWRGGS
Sbjct: 272 CGISNSGYWRGGS 284
>gi|296089404|emb|CBI39223.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 119/204 (58%), Gaps = 41/204 (20%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
GETL+SISKQYGVS+YSIAA NKNI D+DLVF GQ LNIPSS E Q F
Sbjct: 66 GETLSSISKQYGVSIYSIAAANKNIEDIDLVFCGQHLNIPSSAVGETQ--------KFQT 117
Query: 67 KEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLNIFYGPLDKKY 126
+ +++L SFD + QHSL + G L++K
Sbjct: 118 E-------------------------------KSKLSSFDTLKRHQHSLEVLGGRLNQKL 146
Query: 127 FVMEIT-HGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGS 185
+ ++ H L AK TGYFLV+VPLIAFCIRC+IGAF R+ G H+ N S+ + GS
Sbjct: 147 CTVALSFHSLSHAKATGYFLVLVPLIAFCIRCIIGAFQNRVVGDLRHQAVNESEVDYHGS 206
Query: 186 KSVRWKSALRDIIEED-LDSGSRP 208
KSVRWKSAL DI E D LD+G +P
Sbjct: 207 KSVRWKSALDDIREPDTLDTGLQP 230
>gi|449518627|ref|XP_004166338.1| PREDICTED: uncharacterized LOC101208955 [Cucumis sativus]
Length = 303
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 138/257 (53%), Gaps = 39/257 (15%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
E+LTS S Q G +SI NK I+D DL +GQ + I + RE L ++ I S L
Sbjct: 76 NESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKGQNIKI-QNPRELLVELLQKEIDSSKL 134
Query: 67 KEIHRRSLNVFYGRLDKRHISMQITHRLPH---IWRNRLPSFDLKETLQHSLNIFYGPLD 123
FY T P+ + RN +F L+E LQ +LN +
Sbjct: 135 ----------FY------------TSHFPNFDIMIRN---AFQLEEKLQSALNGLR--IY 167
Query: 124 KKYFVMEITHGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHP 183
KK F + +H P A+TT F+V+VPL+ FC RC+IGA + R G + + +G
Sbjct: 168 KKLFALASSHQ-PPARTTS-FIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERR 225
Query: 184 GSKSVRWKSALRDIIEED-LDSGSRPRTNDPVEEQDQAQPLISFEESSHAYRKLEDDYEK 242
+S W+SALRDI E D LD + + P E++ IS EE SHAY+KL+ DYEK
Sbjct: 226 KFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ-----ISVEELSHAYKKLDQDYEK 280
Query: 243 FLSECGMSKWGYWRGGS 259
FLSECG+SKWGYWRGG+
Sbjct: 281 FLSECGLSKWGYWRGGT 297
>gi|449447773|ref|XP_004141642.1| PREDICTED: uncharacterized protein LOC101208955 [Cucumis sativus]
Length = 413
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 135/255 (52%), Gaps = 35/255 (13%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP-SSVREELQATVKNVISSFD 65
E+LTS S Q G +SI NK I+D DL E +R NI + RE L ++ I S
Sbjct: 186 NESLTSTSNQNGDPPHSIVMANKKIMDTDL--EQKRQNIKIQNPRELLVELLQKEIDSSK 243
Query: 66 LKEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLNIFYGPLDKK 125
L FY T P+ +F L+E LQ +LN + KK
Sbjct: 244 L----------FY------------TSHFPNFDIMIRNAFQLEEKLQSALNGLR--IYKK 279
Query: 126 YFVMEITHGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGS 185
F + +H P A+TT F+V+VPL+ FC RC+IGA + R G + + +G
Sbjct: 280 LFALASSHQ-PPARTTS-FIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKF 337
Query: 186 KSVRWKSALRDIIEED-LDSGSRPRTNDPVEEQDQAQPLISFEESSHAYRKLEDDYEKFL 244
+S W+SALRDI E D LD + + P E++ IS EE SHAY+KL+ DYEKFL
Sbjct: 338 RSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ-----ISVEELSHAYKKLDQDYEKFL 392
Query: 245 SECGMSKWGYWRGGS 259
SECG+SKWGYWRGG+
Sbjct: 393 SECGLSKWGYWRGGT 407
>gi|255570899|ref|XP_002526401.1| conserved hypothetical protein [Ricinus communis]
gi|223534263|gb|EEF35977.1| conserved hypothetical protein [Ricinus communis]
Length = 259
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 107/206 (51%), Gaps = 42/206 (20%)
Query: 2 TFGGRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVI 61
+F RGE L SIS+ YG S + I NKNI DVD + +GQ NIP+ V + Q
Sbjct: 59 SFSCRGEKLNSISRHYGESFHPIVDSNKNISDVDFLCKGQLPNIPAFVPADCQ------- 111
Query: 62 SSFDLKEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLNIFYGP 121
L +I + FY KE + S+ I G
Sbjct: 112 ----LYQIKISGKSSFYQ----------------------------KERPRSSMAILDGF 139
Query: 122 LDKKYFVMEITHGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGR 181
L +K F++ +H LP AK+TGYFLV+VPLIAFCI C++GAFHTR+ G R + K R
Sbjct: 140 LKQKPFILLSSHSLPHAKSTGYFLVLVPLIAFCITCILGAFHTRVPSDMGRRAVD--KSR 197
Query: 182 HPGSKSVRWKSALRDIIEED-LDSGS 206
G S+RWK+AL DI E+D LDS S
Sbjct: 198 KKGHNSMRWKNALSDIKEQDNLDSES 223
>gi|359493361|ref|XP_002278178.2| PREDICTED: uncharacterized protein LOC100241456 [Vitis vinifera]
Length = 168
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQ--ATVKNVISSF 64
GETL+SISKQYGVS+YSIAA NKNI D+DLVF GQ LNIPSS E Q T K+ +SSF
Sbjct: 66 GETLSSISKQYGVSIYSIAAANKNIEDIDLVFCGQHLNIPSSAVGETQKFQTEKSKLSSF 125
Query: 65 DLKEIHRRSLNVFYGRLDKRHISMQIT-HRLPH-IWR 99
D + H+ SL V GRL+++ ++ ++ H L H WR
Sbjct: 126 DTLKRHQHSLEVLGGRLNQKLCTVALSFHSLSHSCWR 162
>gi|297809195|ref|XP_002872481.1| hypothetical protein ARALYDRAFT_327172 [Arabidopsis lyrata subsp.
lyrata]
gi|297318318|gb|EFH48740.1| hypothetical protein ARALYDRAFT_327172 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 67/254 (26%)
Query: 3 FGGRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLN-IPSSVREELQATVKNVI 61
F R E+L I KQYGVSV + + DL FE + + +PSSV ++ +
Sbjct: 57 FAKRSESLRRILKQYGVSVETPEENKTSSRLDDLNFEEKHHDDVPSSVIDDAK------- 109
Query: 62 SSFDLKEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLNIFYGP 121
M T LP DL++ ++S +
Sbjct: 110 --------------------------MNTTEELP----------DLRQQEKYSETVSTA- 132
Query: 122 LDKKYFVMEITHGLPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGR 181
H LP T F ++P++ FCI C+IG HT I+ S+
Sbjct: 133 ---DNLSGHDHHNLPHLNTGVLFTSLLPVLGFCIVCIIGTLHTIIS-------RKPSQDH 182
Query: 182 HPGSKSVRWKSALRD----IIEEDLDSGSRPRTNDPVEEQDQAQPLISFEESSHAYRKLE 237
H GSK+ RW++AL D + ++ DS R +E + +E + AY ++E
Sbjct: 183 HHGSKTTRWRTALIDWNEPLASDEHDSSPEYRVASTNQEAN--------DEMNEAYNRVE 234
Query: 238 DDYEKFLSECGMSK 251
+Y++FL ECG+S+
Sbjct: 235 LEYKRFLLECGVSE 248
>gi|42566376|ref|NP_192735.2| uncharacterized protein [Arabidopsis thaliana]
gi|50253440|gb|AAT71922.1| At4g09970 [Arabidopsis thaliana]
gi|58331783|gb|AAW70389.1| At4g09970 [Arabidopsis thaliana]
gi|332657422|gb|AEE82822.1| uncharacterized protein [Arabidopsis thaliana]
Length = 250
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 135 LPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSKSVRWKSAL 194
LP T ++P++ FCI C+IG HT I+ + S+G H GS+ RW++AL
Sbjct: 143 LPHLNTGVLLTSLLPVLGFCIICIIGTLHTIISRKT-------SQGHHHGSE--RWRTAL 193
Query: 195 RDIIEEDLDSGSRPRTNDPVEEQDQAQPLISFEESSHAYRKLEDDYEKFLSECGM 249
D E L S + Q + +E + AY ++E +Y++FL ECG+
Sbjct: 194 MD-WNEPLASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGV 247
>gi|30681263|ref|NP_849352.1| uncharacterized protein [Arabidopsis thaliana]
gi|332657421|gb|AEE82821.1| uncharacterized protein [Arabidopsis thaliana]
Length = 212
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 24/119 (20%)
Query: 135 LPQAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSKSVRWKSAL 194
LP T ++P++ FCI C+IG HT I+ + S+G H GS+ RW++AL
Sbjct: 111 LPHLNTGVLLTSLLPVLGFCIICIIGTLHTIISRKT-------SQGHHHGSE--RWRTAL 161
Query: 195 RDIIEEDLDSGSRPRTNDPVEEQDQAQP----LISFEESSHAYRKLEDDYEKFLSECGM 249
D E P +D D P + +E + AY ++E +Y++FL ECG+
Sbjct: 162 MDWNE--------PLASDG---HDSMSPEYREATATDEMNEAYSRVELEYKRFLLECGV 209
>gi|4539000|emb|CAB39621.1| putative protein [Arabidopsis thaliana]
gi|7267693|emb|CAB78120.1| putative protein [Arabidopsis thaliana]
Length = 208
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 147 VVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSKSVRWKSALRDIIEEDLDSGS 206
++P++ FCI C+IG HT I+ + S+G H GS+ RW++AL D E L S
Sbjct: 113 LLPVLGFCIICIIGTLHTIISRKT-------SQGHHHGSE--RWRTALMD-WNEPLASDG 162
Query: 207 RPRTNDPVEEQDQAQPLISFEESSHAYRKLEDDYEKFLSECGM 249
+ Q + +E + AY ++E +Y++FL ECG+
Sbjct: 163 HDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGV 205
>gi|167998466|ref|XP_001751939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697037|gb|EDQ83374.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 342
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 39/161 (24%)
Query: 137 QAKTTGYFLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSKSV-RWKSAL- 194
QA L++ P+I F RC++ HT+I G R A + V RW++ L
Sbjct: 179 QAHIAFPLLLIAPVIGFIARCVVDYIHTQIENEVGKRFAEMESWQALQRPRVKRWQTILD 238
Query: 195 --RDIIEEDL-------------------------------DSGSRPRTNDP----VEEQ 217
RD E +L DS + R P EE+
Sbjct: 239 EDRDENELELLTTTISNYQYQASWPSDPWTSNSYQPTTSRDDSETNGRYQIPPGKETEEE 298
Query: 218 DQAQPLISFEESSHAYRKLEDDYEKFLSECGMSKWGYWRGG 258
+ + +EE +Y KLE YEKFL++ G++ GYWRG
Sbjct: 299 RKLRQKYDYEEIKRSYTKLEPMYEKFLADSGLTGSGYWRGA 339
>gi|227326202|ref|ZP_03830226.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 557
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLNIP++ ++ +T
Sbjct: 453 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNIPATGTKQTAST 502
>gi|421081711|ref|ZP_15542620.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pectobacterium
wasabiae CFBP 3304]
gi|401703524|gb|EJS93738.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pectobacterium
wasabiae CFBP 3304]
Length = 553
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLNIP++ ++ +T
Sbjct: 449 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNIPATGTKQTAST 498
>gi|253690085|ref|YP_003019275.1| cell wall hydrolase/autolysin [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756663|gb|ACT14739.1| cell wall hydrolase/autolysin [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 557
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLNIP++ ++ +T
Sbjct: 453 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNIPATGTKQTAST 502
>gi|354596040|ref|ZP_09014057.1| cell wall hydrolase/autolysin [Brenneria sp. EniD312]
gi|353673975|gb|EHD20008.1| cell wall hydrolase/autolysin [Brenneria sp. EniD312]
Length = 562
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATV 57
RGETL++I+ +YGVS+ +I ++NK ++ D+V+ GQRLNIP++ + A
Sbjct: 458 ARGETLSAIAARYGVSMAAIRSINK--LNKDIVWVGQRLNIPATASKAATAVA 508
>gi|227115183|ref|ZP_03828839.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 556
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLNIP++ + +T
Sbjct: 452 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNIPATGTRQAAST 501
>gi|403060150|ref|YP_006648367.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807476|gb|AFR05114.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 556
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLNIP++ + +T
Sbjct: 452 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNIPATGTRQAAST 501
>gi|385873611|gb|AFI92131.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pectobacterium sp.
SCC3193]
Length = 553
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLN+P++ ++ +T
Sbjct: 449 ARGETLSSIARRYGVSLTAMRDVNK--LNKDIVWVGQRLNVPTTGTKQTAST 498
>gi|261823154|ref|YP_003261260.1| cell wall hydrolase/autolysin [Pectobacterium wasabiae WPP163]
gi|261607167|gb|ACX89653.1| cell wall hydrolase/autolysin [Pectobacterium wasabiae WPP163]
Length = 542
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++YGVS+ ++ VNK ++ D+V+ GQRLN+P++ ++ +T
Sbjct: 438 ARGETLSSIARRYGVSLAAMRDVNK--LNKDIVWVGQRLNVPATGTKQTAST 487
>gi|168025562|ref|XP_001765303.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683622|gb|EDQ70031.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 31/145 (21%)
Query: 144 FLVVVPLIAFCIRCMIGAFHTRIAGGSGHRVANGSKGRHPGSKSV-RWKSAL-------- 194
L++ P++ FC+RC + RI + A R V RW+ L
Sbjct: 238 LLLIAPVVGFCVRCAVDYIQERIQKEIEAKHAELESYRSRRRPKVNRWQGILDEDRMEAL 297
Query: 195 ---------------RDIIEEDLDSGS---RPRTNDPV----EEQDQAQPLISFEESSHA 232
R + E+ + +G R D V E++ + + + +E+ +
Sbjct: 298 GHEEAAAASAALDDYRFLDEQQIPTGYASIRAMNEDSVANESEDEQKHRHMKDYEDIRKS 357
Query: 233 YRKLEDDYEKFLSECGMSKWGYWRG 257
Y +LE Y+KFL + G+S+ GYWRG
Sbjct: 358 YAELETTYKKFLLDSGLSRSGYWRG 382
>gi|50122857|ref|YP_052024.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
SCRI1043]
gi|49613383|emb|CAG76834.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
SCRI1043]
Length = 556
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+SI+++Y VS+ ++ VNK ++ D+V+ GQRLNIP++ ++ +T
Sbjct: 452 ARGETLSSIARRYSVSLAAMRDVNK--LNKDIVWVGQRLNIPATGSKQTAST 501
>gi|383452416|ref|YP_005366405.1| LysM domain-containing protein [Corallococcus coralloides DSM
2259]
gi|380727457|gb|AFE03459.1| LysM domain-containing protein [Corallococcus coralloides DSM
2259]
Length = 232
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNV 60
G+TL+ ++K+YG SV S+ N +I + DL++ G+ LNIP S R+ + + V
Sbjct: 8 GDTLSGLAKRYGTSVDSLMKANPDIQNKDLIYAGKTLNIPGS-RDSFEPGTQGV 60
>gi|269929406|ref|YP_003321727.1| Lytic transglycosylase catalytic [Sphaerobacter thermophilus DSM
20745]
gi|269788763|gb|ACZ40905.1| Lytic transglycosylase catalytic [Sphaerobacter thermophilus DSM
20745]
Length = 299
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
GETLT I+ YGV++ +IA N I +VDL++ GQ+L IP++
Sbjct: 38 GETLTGIAAAYGVTIDAIAQAN-GIANVDLIYAGQQLIIPTA 78
>gi|398390405|ref|XP_003848663.1| hypothetical protein MYCGRDRAFT_111221 [Zymoseptoria tritici
IPO323]
gi|339468538|gb|EGP83639.1| hypothetical protein MYCGRDRAFT_111221 [Zymoseptoria tritici
IPO323]
Length = 232
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
G++ ++I+ + +++ S+ A N I + DL+F GQ +N P + VI S D
Sbjct: 126 SGDSFSAIATSFNITLASLEARNPQIPNYDLIFPGQVINTPLCPNSVCDSIGTYVIESGD 185
Query: 66 LKEIHRRSLNVFYGRLDKRHISMQITH-------RLPHIWRN 100
+ +S NV G+L+ ++++ +T LPH N
Sbjct: 186 IFYNLAQSNNVTVGQLESLNVNVNVTDIHPGDIIILPHNCHN 227
>gi|403526668|ref|YP_006661555.1| LysM domain-containing protein [Arthrobacter sp. Rue61a]
gi|403229095|gb|AFR28517.1| putative LysM domain protein [Arthrobacter sp. Rue61a]
Length = 447
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSF 64
G+TL+SI+ ++GVS+ ++ A N N+ +++ GQ+L IP + + + T V S+F
Sbjct: 235 GDTLSSIASRHGVSLAALMAANNNVTATTVIYPGQKLTIPGAGLQPVGDTKPLVPSTF 292
>gi|119961950|ref|YP_947455.1| LysM domain-containing protein [Arthrobacter aurescens TC1]
gi|119948809|gb|ABM07720.1| putative LysM domain protein [Arthrobacter aurescens TC1]
Length = 445
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSF 64
G+TL+SI+ ++GVS+ ++ A N N+ +++ GQ+L IP + + + T V S+F
Sbjct: 233 GDTLSSIASRHGVSLAALMAANNNVTATTVIYPGQKLTIPGAGLQPVGDTKPLVPSTF 290
>gi|310658820|ref|YP_003936541.1| conserved protein of unknown function [[Clostridium] sticklandii]
gi|308825598|emb|CBH21636.1| conserved protein of unknown function [[Clostridium] sticklandii]
Length = 217
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+G+TLT I+KQYG ++ I +NK I + +L+ G+ LNIP +
Sbjct: 173 QGDTLTRIAKQYGTTIDEILKLNKGIKNPNLIIAGKNLNIPVKAK 217
>gi|358366271|dbj|GAA82892.1| chitinase [Aspergillus kawachii IFO 4308]
Length = 516
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREE 52
G++L IS+ +GV++ ++ A N I + DL++ GQ+LNIP+S + +
Sbjct: 9 GDSLWKISQDHGVTLDALRAANPQITNPDLIYPGQQLNIPASDQSQ 54
>gi|347756753|ref|YP_004864316.1| muramidase [Candidatus Chloracidobacterium thermophilum B]
gi|347589270|gb|AEP13799.1| Muramidase (flagellum-specific) [Candidatus Chloracidobacterium
thermophilum B]
Length = 661
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL+ I++QYG +V ++ N +I + +L++ GQR+ IP S
Sbjct: 373 GDTLSGIAQQYGTTVAALQRANPSITNPNLIYPGQRIVIPGS 414
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL------QATVKN 59
RGETL+ I+++YG +V ++ N+ I + +L++ GQ L IP++ QA +
Sbjct: 28 RGETLSGIAQRYGTTVDALLQANRQIRNPNLIYAGQTLTIPTTRNTSAPNQAGSQAGSQY 87
Query: 60 VISSFD-LKEIHRRSLNVFYGRLDKRHISMQ 89
V+ D L EI R+ + RL K + +Q
Sbjct: 88 VVRRGDTLSEIAARN-GIDLARLIKANTQIQ 117
>gi|378823508|ref|ZP_09846133.1| LysM domain protein [Sutterella parvirubra YIT 11816]
gi|378597686|gb|EHY30949.1| LysM domain protein [Sutterella parvirubra YIT 11816]
Length = 674
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD- 65
GETL+SI+++YGVSV ++ N+ + +++ GQRL IP + ++L A V + D
Sbjct: 464 GETLSSIARRYGVSVSALRTTNR--ISGNVIRPGQRLRIPGTAGDDLPAAVIYTVRQGDA 521
Query: 66 LKEIHRR 72
L I +R
Sbjct: 522 LSTIAQR 528
>gi|398311642|ref|ZP_10515116.1| spore coat morphogenetic protein SafA [Bacillus mojavensis RO-H-1]
Length = 387
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E++A K+ +
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSGGVPVRKEIKAG-KSPAA 66
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPSFDLKE 109
S + K+ H S +D K S+ +P++ N P D+ +
Sbjct: 67 SGNEKKEHPYSKEKPKSVVDVEDTKPKEKQSVPFVPPMPNLHDNVYPEADVND 119
>gi|383763173|ref|YP_005442155.1| hypothetical protein CLDAP_22180 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383441|dbj|BAM00258.1| hypothetical protein CLDAP_22180 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 641
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
G+TL SI+ +YGVS++ + AVN N+V+ DL+F GQ L +P
Sbjct: 538 GDTLASIAHRYGVSLHHLIAVN-NLVNPDLIFVGQVLRLPG 577
>gi|302800838|ref|XP_002982176.1| hypothetical protein SELMODRAFT_421511 [Selaginella moellendorffii]
gi|300150192|gb|EFJ16844.1| hypothetical protein SELMODRAFT_421511 [Selaginella moellendorffii]
Length = 291
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 214 VEEQDQAQPLISFEESSHAYRKLEDDYEKFLSECGMSKWGYWRGGSP 260
EEQ +A+ EE +Y +LE Y +FL++ G+S+ GYWRGG P
Sbjct: 241 TEEQRKAR---EEEELRKSYAELEATYMQFLADSGLSRSGYWRGGMP 284
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
GETLTSI++QY SV +IA NK I D+DL+ G+ L +P R
Sbjct: 75 GETLTSIARQYSTSVQTIALANK-IDDIDLLQTGRVLLVPVQPR 117
>gi|335041492|ref|ZP_08534525.1| cell wall hydrolase SleB [Caldalkalibacillus thermarum TA2.A1]
gi|334178616|gb|EGL81348.1| cell wall hydrolase SleB [Caldalkalibacillus thermarum TA2.A1]
Length = 204
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
G+TL+ +++++G+SV I +N NI D DL++ G LN+P E Q+
Sbjct: 29 GDTLSELAQKFGLSVDDILKLNPNIKDPDLIYAGDSLNLPGRESEAKQS 77
>gi|452980475|gb|EME80236.1| carbohydrate-binding module family 50 protein [Pseudocercospora
fijiensis CIRAD86]
Length = 413
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
G+TLT+I+K + +++ SI A N NI + DL+ GQ+L I + +I S D
Sbjct: 306 SGDTLTAIAKDFNITLASILAANPNITNPDLIQVGQQLKITVCPNSRCDSVGSYIIKSGD 365
Query: 66 L 66
L
Sbjct: 366 L 366
>gi|339629448|ref|YP_004721091.1| LysM repeat-containing protein [Sulfobacillus acidophilus TPY]
gi|379007434|ref|YP_005256885.1| peptidoglycan-binding lysin domain-containing protein
[Sulfobacillus acidophilus DSM 10332]
gi|339287237|gb|AEJ41348.1| LysM repeat-containing protein [Sulfobacillus acidophilus TPY]
gi|361053696|gb|AEW05213.1| Peptidoglycan-binding lysin domain protein [Sulfobacillus
acidophilus DSM 10332]
Length = 320
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 34/44 (77%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
+G+TL++I++ +GVS+ ++ A N +I D +L++ G+ + IP+S+
Sbjct: 168 KGDTLSAIAQAHGVSLAALEAANPHITDPNLIYPGETVYIPTSI 211
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 30/41 (73%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
+G+TL++I+ +YG+S+ ++ A N I D +L++ G+ + IP
Sbjct: 84 KGDTLSAIAARYGISLAALEAANPQIKDPNLIYPGETITIP 124
>gi|317128199|ref|YP_004094481.1| spore coat assembly protein SafA [Bacillus cellulosilyticus DSM
2522]
gi|315473147|gb|ADU29750.1| spore coat assembly protein SafA [Bacillus cellulosilyticus DSM
2522]
Length = 343
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVK 58
+G+TL ++++YGV ++ A N N+ + DL+ G ++ IPS ++E+Q+ K
Sbjct: 8 KGDTLWKLAQKYGVDFEALKAANSNLSNPDLIMPGMKVKIPSGSVQAKKEMQSKEK 63
>gi|300743919|ref|ZP_07072939.1| resuscitation-promoting factor RpfA [Rothia dentocariosa M567]
gi|311113171|ref|YP_003984393.1| transglycosylase [Rothia dentocariosa ATCC 17931]
gi|300380280|gb|EFJ76843.1| resuscitation-promoting factor RpfA [Rothia dentocariosa M567]
gi|310944665|gb|ADP40959.1| transglycosylase family protein [Rothia dentocariosa ATCC 17931]
Length = 239
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 7 GETLTSISKQYGVS--VYSIAAVNKNIV-DVDLVFEGQRLNIPS 47
G+TL+ I+ Q GV+ +IAA N ++V +VDL+F GQ LNIP+
Sbjct: 196 GDTLSGIAAQLGVAGGYQAIAAANTDVVYNVDLIFPGQVLNIPA 239
>gi|441497907|ref|ZP_20980114.1| hypothetical protein C900_02393 [Fulvivirga imtechensis AK7]
gi|441438320|gb|ELR71657.1| hypothetical protein C900_02393 [Fulvivirga imtechensis AK7]
Length = 259
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGE++TSI+ +Y +S Y + +N++I D D + EGQ + IP+
Sbjct: 161 RGESITSIAAKYKLSGYMLLEINEDIDDYDDISEGQNITIPND 203
>gi|301299186|ref|ZP_07205474.1| glycosyl hydrolase family 25 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300853214|gb|EFK80810.1| glycosyl hydrolase family 25 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 385
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRL I +V + TV+
Sbjct: 296 GDTLSGIAYKYGVNVYTLAR-NNGISNINWIYPGQRLKITGNVSNQRTYTVR 346
>gi|188535088|ref|YP_001908885.1| N-acetylmuramoyl-L-alanine amidase [Erwinia tasmaniensis Et1/99]
gi|188030130|emb|CAO98016.1| N-acetylmuramoyl-L-alanine amidase [Erwinia tasmaniensis Et1/99]
Length = 554
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+ I+ +YGVS+ ++ A+ N + D+V+ GQRL +P+ + + AT
Sbjct: 455 RGETLSGIAAEYGVSMATLRAM--NTLKKDVVWVGQRLKVPAGSQPVIAAT 503
>gi|258516576|ref|YP_003192798.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257780281|gb|ACV64175.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 335
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+T+ +IS++YG+ + ++ A N I + DL+F GQ +NIP
Sbjct: 66 GDTMFTISQKYGIELETLIAANPQIKNPDLIFPGQVINIP 105
>gi|428280239|ref|YP_005561974.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. natto BEST195]
gi|291485196|dbj|BAI86271.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. natto BEST195]
Length = 387
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K SM +P++ N P +D+K+
Sbjct: 68 S--VKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|383762045|ref|YP_005441027.1| hypothetical protein CLDAP_10900 [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381382313|dbj|BAL99129.1| hypothetical protein CLDAP_10900 [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 338
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
GE L++I+++YGVS+ +AA N IV+ +L+F GQ+L IP
Sbjct: 33 GENLSTIARRYGVSMQELAAYN-GIVNPNLLFVGQKLQIP 71
>gi|16079836|ref|NP_390662.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. 168]
gi|221310723|ref|ZP_03592570.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315048|ref|ZP_03596853.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319968|ref|ZP_03601262.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324249|ref|ZP_03605543.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321312314|ref|YP_004204601.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
BSn5]
gi|402776940|ref|YP_006630884.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
QB928]
gi|418032036|ref|ZP_12670519.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|452915400|ref|ZP_21964026.1| spoIVD-associated factor A [Bacillus subtilis MB73/2]
gi|81342127|sp|O32062.1|SAFA_BACSU RecName: Full=SpoIVD-associated factor A; AltName:
Full=Morphogenetic protein SafA
gi|2635249|emb|CAB14744.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. 168]
gi|6977797|emb|CAB75322.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
gi|320018588|gb|ADV93574.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
BSn5]
gi|351470899|gb|EHA31020.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402482120|gb|AFQ58629.1| Morphogenetic protein associated with SpoVID [Bacillus subtilis
QB928]
gi|407959979|dbj|BAM53219.1| morphogenetic protein associated [Bacillus subtilis BEST7613]
gi|407965622|dbj|BAM58861.1| morphogenetic protein associated [Bacillus subtilis BEST7003]
gi|452115748|gb|EME06144.1| spoIVD-associated factor A [Bacillus subtilis MB73/2]
Length = 387
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K SM +P++ N P +D+K+
Sbjct: 68 S--VKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|90961285|ref|YP_535201.1| phage lysin [Lactobacillus phage Sal2]
gi|385840045|ref|YP_005863369.1| Phage lysin [Lactobacillus salivarius CECT 5713]
gi|90820479|gb|ABD99118.1| Phage lysin [Lactobacillus phage Sal2]
gi|300214166|gb|ADJ78582.1| Phage lysin [Lactobacillus salivarius CECT 5713]
Length = 422
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRL I +V + TV+
Sbjct: 333 GDTLSGIAYKYGVNVYTLAR-NNGISNINWIYPGQRLKITGNVSNQRTYTVR 383
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRLNI
Sbjct: 385 GDTLSGIAYRYGVNVYTLAR-NNGISNINWIYPGQRLNI 422
>gi|430755917|ref|YP_007208712.1| Spore integument protein YrbB [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|2911139|dbj|BAA24943.1| yrbA [Bacillus subtilis]
gi|430020437|gb|AGA21043.1| Spore integument protein YrbB [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 387
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K SM +P++ N P +D+K+
Sbjct: 68 S--VKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|386759340|ref|YP_006232556.1| morphogenetic protein associated with SpoVID [Bacillus sp. JS]
gi|384932622|gb|AFI29300.1| morphogenetic protein associated with SpoVID [Bacillus sp. JS]
Length = 384
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQA----TVK 58
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 59 NVISSFDLKEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKE 109
NV + +S+ K S+ +P++ N P D+ E
Sbjct: 68 NVKQEHPYAKEKPKSVVDVEDTKPKEKKSVPYVPPMPNLQENVYPEADVNE 118
>gi|449095227|ref|YP_007427718.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
XF-1]
gi|449029142|gb|AGE64381.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
XF-1]
Length = 385
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K SM +P++ N P +D+K+
Sbjct: 68 S--VKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|374994379|ref|YP_004969878.1| carboxypeptidase [Desulfosporosinus orientis DSM 765]
gi|357212745|gb|AET67363.1| putative carboxypeptidase [Desulfosporosinus orientis DSM 765]
Length = 358
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
GE+L I+++YG+S+ S+ A N +I + DL+ GQ LN+P E
Sbjct: 16 EGESLYIIAQKYGISLSSLIAANPDIKNPDLIVPGQVLNVPKKSLE 61
>gi|301299517|ref|ZP_07205789.1| LysM domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852881|gb|EFK80493.1| LysM domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 203
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRL I +V + TV+
Sbjct: 114 GDTLSGIAYKYGVNVYTLAR-NNGISNINWIYPGQRLKITGNVSNQRTYTVR 164
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRL I
Sbjct: 166 GDTLSGIAYRYGVNVYTLAR-NNGISNINWIYPGQRLTI 203
>gi|108761372|ref|YP_635494.1| class I chitinase [Myxococcus xanthus DK 1622]
gi|108465252|gb|ABF90437.1| chitinase, class I [Myxococcus xanthus DK 1622]
Length = 364
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL+ I+ +YG SV ++A N NI + +L++ GQRL IP
Sbjct: 123 GDTLSGIAGRYGTSVGALAQAN-NISNPNLIYAGQRLTIP 161
>gi|381210477|ref|ZP_09917548.1| hypothetical protein LGrbi_11166 [Lentibacillus sp. Grbi]
Length = 310
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR---------EELQAT 56
+G+TL I+KQYG + +N + D++ G ++ IP+S + +E+Q
Sbjct: 8 KGDTLWEIAKQYGADFEQVKQLNPQLSSPDMIMPGMKIKIPASSKPVKKEEMQHKEVQKE 67
Query: 57 VKNVISSFDLKEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSFDLKETLQHSLN 116
+ I+ K+ + + V + D I ++P + ++PS + + ++N
Sbjct: 68 TQKPIAEKPYKDTSPKPMPV--TKEDDVKQPKDIKPKMP--MQPKMPSMEQEMNYYTTIN 123
Query: 117 I-----FYGPLDKKYFVMEI-THGLPQAKTTGY 143
+ + P DK +I H LP+ Y
Sbjct: 124 LPQIPAYKQPEDKPIEKEKICCHSLPKPDLAFY 156
>gi|383761978|ref|YP_005440960.1| hypothetical protein CLDAP_10230 [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381382246|dbj|BAL99062.1| hypothetical protein CLDAP_10230 [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 422
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNV 60
GETLT I+ +YGVS+ ++ N+ I + D +F GQ+L IP+ + + QA V N+
Sbjct: 23 GETLTEIAARYGVSLEALMQANQ-ISEADRIFSGQQLIIPTPL-DPSQAEVVNI 74
>gi|384176366|ref|YP_005557751.1| spore coat morphogenetic protein SafA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349595590|gb|AEP91777.1| spore coat morphogenetic protein SafA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 387
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV V + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K SM +P++ N P +D+K+
Sbjct: 68 S--VKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|296133213|ref|YP_003640460.1| peptidoglycan-binding lysin domain-containing protein
[Thermincola potens JR]
gi|296031791|gb|ADG82559.1| Peptidoglycan-binding lysin domain protein [Thermincola potens
JR]
Length = 90
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
G+TL I++++GV+V I AVN I D +L+F GQ + IP R E+
Sbjct: 8 GDTLYIIAQRFGVTVADILAVNPQIRDPNLIFPGQVIIIPGK-RPEIPP 55
>gi|83590119|ref|YP_430128.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
gi|83573033|gb|ABC19585.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
Length = 307
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL+ I+ +G +V I A N +I D +L++ GQRL IP
Sbjct: 148 GDTLSGIASMFGTTVDQIMAANPHIKDPNLIYPGQRLCIP 187
>gi|389811619|ref|ZP_10206182.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter thiooxydans LCS2]
gi|388440252|gb|EIL96653.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter thiooxydans LCS2]
Length = 503
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GRGE+L+SI+KQYGVSV ++ N N ++ + V G L IP+
Sbjct: 462 GRGESLSSIAKQYGVSVGALK--NANQINSNTVRAGTTLTIPA 502
>gi|149183125|ref|ZP_01861575.1| morphogenetic protein associated with SpoVID [Bacillus sp. SG-1]
gi|148849157|gb|EDL63357.1| morphogenetic protein associated with SpoVID [Bacillus sp. SG-1]
Length = 485
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS---VREELQA 55
+G+TL +ISK+YGV+ + +N + + D++ G ++ +P+S V++E+ A
Sbjct: 8 KGDTLWNISKKYGVNFEELKKMNAQLSNPDMIMPGMKIKVPTSGGMVKKEMAA 60
>gi|261253162|ref|ZP_05945735.1| hypothetical protein VIA_003187 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417955217|ref|ZP_12598238.1| hypothetical protein VIOR3934_12335 [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|260936553|gb|EEX92542.1| hypothetical protein VIA_003187 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813562|gb|EGU48529.1| hypothetical protein VIOR3934_12335 [Vibrio orientalis CIP 102891
= ATCC 33934]
Length = 1191
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVN-KNIVDVDLVFEGQRLNIPSSV 49
RGETL+ ++K Y V ++ +N + I D+DL+F+G +L +P +
Sbjct: 8 RGETLSQLAKHYNTDVATLQKLNAEQIKDIDLIFDGNKLILPEEI 52
>gi|386714947|ref|YP_006181270.1| hypothetical protein HBHAL_3651 [Halobacillus halophilus DSM
2266]
gi|384074503|emb|CCG45996.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 366
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+G+TL I+K+YGV + +VN + + D++ G ++ +P ++ + K ++ +
Sbjct: 9 KGDTLWKIAKKYGVDFEELKSVNTQLSNPDMIMPGMKIKVPQGTKQVKKEAPKQMMPKKE 68
Query: 66 LKEI 69
+ +
Sbjct: 69 MPSM 72
>gi|389855911|ref|YP_006358154.1| hypothetical protein SSUST1_0212 [Streptococcus suis ST1]
gi|353739629|gb|AER20636.1| hypothetical protein SSUST1_0212 [Streptococcus suis ST1]
Length = 263
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL 53
G+++ SI++QYGV Y +A VN +D L+ GQRL++P+ EE+
Sbjct: 35 GDSMFSIAEQYGVDPYQLAEVNAMEID-GLITPGQRLDLPAGSNEEV 80
>gi|329889291|ref|ZP_08267634.1| lysM domain protein [Brevundimonas diminuta ATCC 11568]
gi|328844592|gb|EGF94156.1| lysM domain protein [Brevundimonas diminuta ATCC 11568]
Length = 369
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
GETL+ I+++YGVSV + A N+ I + +++ GQ + +P E AT
Sbjct: 29 GETLSGIAERYGVSVGDLLATNRQITNPNVIHPGQTVTLPVGAGEGRDAT 78
>gi|23098402|ref|NP_691868.1| hypothetical protein OB0947 [Oceanobacillus iheyensis HTE831]
gi|22776628|dbj|BAC12903.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 173
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
G+ L+ ISK++ VSV ++ N I D D++F GQ + IP + E+ T
Sbjct: 34 GDVLSEISKEHNVSVATLIEFNTFITDPDIIFAGQSITIPDAKGEKFTVT 83
>gi|383808978|ref|ZP_09964502.1| transglycosylase-like domain / LysM domain multi-domain protein
[Rothia aeria F0474]
gi|383448005|gb|EID50978.1| transglycosylase-like domain / LysM domain multi-domain protein
[Rothia aeria F0474]
Length = 244
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 7 GETLTSISKQYGV--SVYSIAAVN-KNIVDVDLVFEGQRLNIPS 47
G+TL+ I+ YGV +IAA N IV+VDL++ GQ LNIP+
Sbjct: 201 GDTLSGIAAAYGVQGGYNAIAAANPGTIVNVDLIYPGQVLNIPA 244
>gi|407476359|ref|YP_006790236.1| polysaccharide deacetylase [Exiguobacterium antarcticum B7]
gi|407060438|gb|AFS69628.1| Polysaccharide deacetylase [Exiguobacterium antarcticum B7]
Length = 388
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL 53
G+TL SI+ +YGV+V ++A+ NK I +V+L+ GQ L IP + L
Sbjct: 300 GDTLYSIATKYGVTVTALASANK-ITNVNLISVGQVLVIPEVTKNTL 345
>gi|323493747|ref|ZP_08098867.1| hypothetical protein VIBR0546_10229 [Vibrio brasiliensis LMG
20546]
gi|323312087|gb|EGA65231.1| hypothetical protein VIBR0546_10229 [Vibrio brasiliensis LMG
20546]
Length = 1188
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVN-KNIVDVDLVFEGQRLNIPSSV 49
RGETL+ ++K Y V ++ +N + I D+DL+F+G +L +P +
Sbjct: 8 RGETLSQLAKHYNTDVATLQKLNAEQIKDIDLIFDGNKLILPEEI 52
>gi|398306567|ref|ZP_10510153.1| spore coat morphogenetic protein SafA [Bacillus vallismortis
DV1-F-3]
Length = 387
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV + + +N + + DL+ G ++ +PS VR+E A K+ S
Sbjct: 8 KGDSLWKIAEKYGVDIEEVKKLNTQLSNPDLIMPGMKIKVPSEAVPVRKEPLAG-KSPAS 66
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
+ +K+ H + +D K S+ +P++ N P +D+K+
Sbjct: 67 AGSMKQEHPYAKEKPKSVVDVEDTKPKEKESVPYVPPMPNLQENVYPEADVNDYYDMKQL 126
Query: 111 LQ 112
Q
Sbjct: 127 FQ 128
>gi|297544613|ref|YP_003676915.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842388|gb|ADH60904.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 199
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNV 60
G+T+ SI+ ++GVS+ + N I D +L++ GQR+ IP T K +
Sbjct: 40 GDTMWSIANKFGVSLDCLIRANPQISDPNLIYPGQRICIPYYCPPVFPETCKTI 93
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+T+ SI+ +GVS+ ++ N I D +L++ GQ++ IPS+
Sbjct: 158 GDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIPSA 199
>gi|399888887|ref|ZP_10774764.1| putative glycosyl hydrolase [Clostridium arbusti SL206]
Length = 426
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
++L +I+ YG++V + A N I + L++ GQ LNIPSS R
Sbjct: 58 NQSLYTIAATYGLTVNELLAANPQITNAALIYPGQILNIPSSTR 101
>gi|451966508|ref|ZP_21919761.1| N-acetylmuramoyl-L-alanine amidase AmiB [Edwardsiella tarda NBRC
105688]
gi|451314809|dbj|GAC65123.1| N-acetylmuramoyl-L-alanine amidase AmiB [Edwardsiella tarda NBRC
105688]
Length = 533
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RG+TLT I+ QYGVS+ +I NK + D V GQRL IPS
Sbjct: 493 RGDTLTRIAAQYGVSMEAIRQANK--MKSDEVQLGQRLRIPS 532
>gi|402572529|ref|YP_006621872.1| LysM repeat-containing protein [Desulfosporosinus meridiei DSM
13257]
gi|402253726|gb|AFQ44001.1| LysM repeat-containing protein [Desulfosporosinus meridiei DSM
13257]
Length = 177
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL +I++ Y SV +I A+N I + DL++ GQ + IP+S
Sbjct: 8 GDTLFAIAQTYNTSVEAILAINPQITNPDLIYPGQIIIIPTS 49
>gi|294634450|ref|ZP_06712986.1| N-acetylmuramoyl-L-alanine amidase [Edwardsiella tarda ATCC 23685]
gi|291092160|gb|EFE24721.1| N-acetylmuramoyl-L-alanine amidase [Edwardsiella tarda ATCC 23685]
Length = 555
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RG+TLT I+ QYGVS+ +I NK + D V GQRL IPS
Sbjct: 515 RGDTLTRIAAQYGVSMEAIRQANK--MKSDEVQLGQRLRIPS 554
>gi|149182265|ref|ZP_01860745.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
gi|148850034|gb|EDL64204.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
Length = 206
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RG+TL ISK+Y + + I N I + DL++ GQ++NIP+
Sbjct: 34 RGDTLWIISKKYQIGLSEIIEANPQIPNPDLIYPGQKINIPN 75
>gi|317038208|ref|XP_001401833.2| endochitinase 1 [Aspergillus niger CBS 513.88]
Length = 510
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G++L +S+ +GV++ ++ A N I + DL++ GQ LNIP
Sbjct: 9 GDSLWKVSQDHGVTLDALRAANPQITNPDLIYPGQELNIP 48
>gi|431792161|ref|YP_007219066.1| peptidoglycan-binding domain-containing protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782387|gb|AGA67670.1| putative peptidoglycan-binding domain-containing protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 178
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL I++Q+ +V +I A+N I + +L+F GQ +NIP
Sbjct: 8 GDTLYLIAQQFNTTVDAIVALNSQITNPNLIFPGQLINIP 47
>gi|304310138|ref|YP_003809736.1| hypothetical protein HDN1F_04870 [gamma proteobacterium HdN1]
gi|301795871|emb|CBL44070.1| hypothetical protein HDN1F_04870 [gamma proteobacterium HdN1]
Length = 286
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
RG+TL+ I+K YGVS+ ++ N I + DL++ G +++IP +
Sbjct: 32 RGDTLSGIAKLYGVSLSALIKANPQIRNPDLIYPGDQIHIPKAA 75
>gi|440782599|ref|ZP_20960616.1| putative glycosyl hydrolase [Clostridium pasteurianum DSM 525]
gi|440220123|gb|ELP59332.1| putative glycosyl hydrolase [Clostridium pasteurianum DSM 525]
Length = 426
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 8 ETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
E+L SI+ YG++V + A N I + DL++ GQ L IPS R+
Sbjct: 59 ESLYSIAAAYGMTVNELIAANPQITNPDLIYPGQVLRIPSRTRK 102
>gi|350266953|ref|YP_004878260.1| spore coat morphogenetic protein SafA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599840|gb|AEP87628.1| spore coat morphogenetic protein SafA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 386
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G++L I+++YGV + + +N + + DLV G ++ +PS VR+E +A
Sbjct: 8 KGDSLLKIAEKYGVDIEEVKKLNTQLSNPDLVMPGMKIKVPSEGVPVRKEPKAGKSPAPG 67
Query: 63 SFDLKEIHRRSLNVFYGRLD------KRHISMQITHRLPHIWRNRLPS------FDLKET 110
S +K+ H + +D K S+ +P++ N P +D+K+
Sbjct: 68 S--VKQDHPYAKEKPKSVVDVEDTKPKEKKSVPYVPPMPNLQENVYPEADVNDYYDMKQL 125
Query: 111 LQ 112
Q
Sbjct: 126 FQ 127
>gi|408356394|ref|YP_006844925.1| hypothetical protein AXY_10310 [Amphibacillus xylanus NBRC 15112]
gi|407727165|dbj|BAM47163.1| hypothetical protein AXY_10310 [Amphibacillus xylanus NBRC 15112]
Length = 316
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQ-----ATVKNV 60
+G+TL ++KQY V ++ A N ++ + D++ G ++ IP++ ++ +Q A + V
Sbjct: 8 KGDTLWKLAKQYNVDFEALKAANTHLANPDMIMPGMKIRIPTAKKQVVQSKTGTAPKEKV 67
Query: 61 ISSF 64
++ F
Sbjct: 68 MTPF 71
>gi|374580317|ref|ZP_09653411.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
gi|374416399|gb|EHQ88834.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
Length = 350
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
+GETL I+K+YG+ + S+ + N I + ++ GQ +NIPS+ +
Sbjct: 8 KGETLYIIAKKYGIDLSSLVSANPTIKNPGMIMPGQVINIPSTAAQ 53
>gi|271502156|ref|YP_003335182.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech586]
gi|270345711|gb|ACZ78476.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech586]
Length = 563
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQ------ATVKNV 60
GETL+ I+ YGVS+ +I +N+ + D+V+ GQRL IPSS + AT K V
Sbjct: 445 GETLSGIAAHYGVSMDAIRDINR--LKKDVVWVGQRLKIPSSASSTTRTASVPAATSKPV 502
Query: 61 ISS 63
++S
Sbjct: 503 VAS 505
>gi|205374293|ref|ZP_03227092.1| SpoVID-associated morphogenetic protein [Bacillus coahuilensis
m4-4]
Length = 478
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQATVKNVIS 62
+G+TL +ISK+YGVS + +N + + D++ G ++ +P+ SV++E A + +
Sbjct: 8 KGDTLWNISKKYGVSFEEVKKMNAQLSNPDMIMPGMKIKVPTTGGSVKKE--APINYGVK 65
Query: 63 SFDLKE---IHRRSLNVFYGRLDKRHISM-----QITHRLPHIWRNRLPSFDL 107
E ++ + + + K+ + + + P + + LP D+
Sbjct: 66 EMPKAEHPYKEQKPMTMPAKEMPKKEAPIMKEKPMVQPKAPKMPQPILPDIDI 118
>gi|23099495|ref|NP_692961.1| hypothetical protein OB2040 [Oceanobacillus iheyensis HTE831]
gi|22777724|dbj|BAC13996.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 385
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATV 57
+G+TL ++SKQYGV + VN + + + + G ++ IPS+ ++ + T+
Sbjct: 8 KGDTLWNLSKQYGVDFQELKEVNTQLSNPEKIMPGMKIKIPSTAKQVKKETI 59
>gi|238795250|ref|ZP_04638833.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia intermedia ATCC
29909]
gi|238725418|gb|EEQ16989.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia intermedia ATCC
29909]
Length = 610
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S R A K
Sbjct: 504 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPTSGRTVTAAAPK 554
>gi|383761491|ref|YP_005440473.1| hypothetical protein CLDAP_05360 [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381381759|dbj|BAL98575.1| hypothetical protein CLDAP_05360 [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 145
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
GE LT IS+ YGVSV+ IA VN I + L++ GQ L IPS+
Sbjct: 46 GENLTRISRIYGVSVWHIAQVN-GIRNPSLIYVGQVLCIPST 86
>gi|383452320|ref|YP_005366309.1| phage tail length tape-measure protein, partial [Corallococcus
coralloides DSM 2259]
gi|380734659|gb|AFE10661.1| phage tail length tape-measure protein [Corallococcus coralloides
DSM 2259]
Length = 200
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
G+TL++++K++ V S+ N NI + DL++ LNIP S +++ QA
Sbjct: 8 GDTLSALAKRFNTDVDSLVKANPNITNKDLIYADATLNIPGS-KDDFQA 55
>gi|168012098|ref|XP_001758739.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689876|gb|EDQ76245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 555
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSF- 64
+G+TL IS++Y V+V ++ A N I D D + G+ + P EL TV+ V F
Sbjct: 114 KGDTLWGISRKYNVTVEALMATN-GIKDGDNIAAGESIMWPGRWVPELSFTVEPVAIYFC 172
Query: 65 DLKEIHRRSLNVFYGR--LDKRHISMQIT 91
D +H++ +N R DKR S++ T
Sbjct: 173 DTWALHQKRINCSPSRNHTDKRQKSLKAT 201
>gi|421197675|ref|ZP_15654847.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB576]
gi|399974727|gb|EJO08810.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB576]
Length = 53
Score = 40.4 bits (93), Expect = 0.73, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 16 GDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 53
>gi|421193236|ref|ZP_15650486.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB553]
gi|399972915|gb|EJO07108.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB553]
Length = 483
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 444 ASGDTLTSIAKSYGVSISTLAKLN-NISNTNLIYAGTTLKI 483
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 377 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 416
>gi|328948897|ref|YP_004366234.1| peptidase M23 [Treponema succinifaciens DSM 2489]
gi|328449221|gb|AEB14937.1| Peptidase M23 [Treponema succinifaciens DSM 2489]
Length = 288
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL----QATVKNVI 61
+GET SIS++YG+SV + AVN N+ D++ GQ+L+IP E+ + VKN +
Sbjct: 33 KGETYYSISRKYGISVEQLCAVN-NLTVNDVLKVGQKLSIPEKNVEKKILPSSSPVKNTL 91
Query: 62 SS---FDLKEIHR 71
S+ FD + +
Sbjct: 92 SAERKFDTYTVQK 104
>gi|414154361|ref|ZP_11410680.1| Peptidoglycan-binding lysin domain protein [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454152|emb|CCO08584.1| Peptidoglycan-binding lysin domain protein [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 550
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
RG+TL+ ++++YG +V +I AVN I + +L+ GQ + IP +
Sbjct: 505 RGDTLSKLAQRYGTTVQAILAVNPQITNPNLITVGQTIKIPCVAK 549
>gi|229917646|ref|YP_002886292.1| polysaccharide deacetylase [Exiguobacterium sp. AT1b]
gi|229469075|gb|ACQ70847.1| polysaccharide deacetylase [Exiguobacterium sp. AT1b]
Length = 396
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
G+TL SI++ YGV+V ++AA N NI + L++ GQ L IP + TVK + S D
Sbjct: 245 GDTLYSIARTYGVTVSALAAAN-NITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKSGD 302
>gi|51893120|ref|YP_075811.1| spore peptidoglycan hydrolase [Symbiobacterium thermophilum IAM
14863]
gi|51856809|dbj|BAD40967.1| spore peptidoglycan hydrolase [Symbiobacterium thermophilum IAM
14863]
Length = 419
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
GETL I+ +YG +V +IA N+ I +V+L++ GQ L IP R ++A
Sbjct: 52 GETLWQIAARYGTTVDAIARENR-IANVNLIYPGQTLVIPRGTRPVIEA 99
>gi|108756917|ref|YP_628689.1| LysM domain-containing protein [Myxococcus xanthus DK 1622]
gi|108460797|gb|ABF85982.1| LysM domain protein [Myxococcus xanthus DK 1622]
Length = 293
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL+ ++++Y SV ++ N I + DL++ G+ LNIP S
Sbjct: 67 GDTLSHLAQRYNTSVSALMKANPQIKNADLIYAGKSLNIPGS 108
>gi|419858446|ref|ZP_14381119.1| LysM repeat-containing muramidase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410498882|gb|EKP90327.1| LysM repeat-containing muramidase [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 487
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 448 ASGDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 487
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 381 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 420
>gi|433462666|ref|ZP_20420242.1| hypothetical protein D479_13757 [Halobacillus sp. BAB-2008]
gi|432188535|gb|ELK45719.1| hypothetical protein D479_13757 [Halobacillus sp. BAB-2008]
Length = 295
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 30/46 (65%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
+G+TL +I+K+YGV+ + +VN + + D++ G ++ +P ++
Sbjct: 8 KGDTLWNIAKKYGVNFEELKSVNTQLSNPDMIMPGMKIKVPQGTKQ 53
>gi|297545285|ref|YP_003677587.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843060|gb|ADH61576.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 333
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K + +V +I N +I D +L++ GQR+ IP+S +E
Sbjct: 263 GDTLWNIAKTFNTTVEAILKANPDIKDPNLIYPGQRIIIPTSSQE 307
>gi|423611982|ref|ZP_17587843.1| hypothetical protein IIM_02697 [Bacillus cereus VD107]
gi|401246989|gb|EJR53333.1| hypothetical protein IIM_02697 [Bacillus cereus VD107]
Length = 265
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL +ISKQYGVS+ SI N + D F G++LNIP S++
Sbjct: 36 KNDTLWNISKQYGVSIQSIKQANNKV--NDRTFIGEQLNIPGSMK 78
>gi|421191462|ref|ZP_15648736.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB548]
gi|399971580|gb|EJO05820.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB548]
Length = 469
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 430 ASGDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 469
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 361 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 400
>gi|289579097|ref|YP_003477724.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
gi|289528810|gb|ADD03162.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
Ab9]
Length = 336
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K + +V +I N +I D +L++ GQR+ IP+S +E
Sbjct: 263 GDTLWNIAKTFNTTVEAILKANPDIKDPNLIYPGQRIIIPTSSQE 307
>gi|269219434|ref|ZP_06163288.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211130|gb|EEZ77470.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 348
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVI 61
RG+TL+ I++Q+G +V +IA N I D ++ G+ L IP + E AT +N +
Sbjct: 137 RGDTLSGIARQHGTTVAAIAQAN-GIADPARIYAGKTLTIPGAATEA-SATPQNPV 190
>gi|116491213|ref|YP_810757.1| LysM repeat-containing muramidase [Oenococcus oeni PSU-1]
gi|116091938|gb|ABJ57092.1| Muramidase with LysM repeats [Oenococcus oeni PSU-1]
Length = 390
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 351 ASGDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 390
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 284 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 323
>gi|403070246|ref|ZP_10911578.1| hypothetical protein ONdio_11757 [Oceanobacillus sp. Ndiop]
Length = 335
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+G+TL ISK+YGV + +N + D++ G ++ +P S + + TV I
Sbjct: 8 KGDTLWEISKKYGVDFEELKGLNSQLSSPDMIMPGMKIKVPGSAKAVKKETV--AIKETQ 65
Query: 66 LKEIHRRS 73
KE + +
Sbjct: 66 QKETQKEN 73
>gi|419758757|ref|ZP_14285071.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB304]
gi|399904587|gb|EJN92041.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB304]
Length = 366
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 327 ASGDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 366
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 258 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 297
>gi|118586314|ref|ZP_01543767.1| hypothetical protein, LysM-repeat domain [Oenococcus oeni ATCC
BAA-1163]
gi|118433240|gb|EAV39953.1| hypothetical protein, LysM-repeat domain [Oenococcus oeni ATCC
BAA-1163]
Length = 256
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 217 ASGDTLTSIAKSYGVSISTLAKLN-NISNTNLIYAGTTLKI 256
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 83 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 122
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 150 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 189
>gi|323490249|ref|ZP_08095465.1| polysaccharide deacetylase [Planococcus donghaensis MPA1U2]
gi|323396089|gb|EGA88919.1| polysaccharide deacetylase [Planococcus donghaensis MPA1U2]
Length = 398
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
G+TL SI+K+Y V+V ++A N NI + +L+ GQ L IP VK + + D
Sbjct: 247 GDTLYSIAKKYNVTVSALAKAN-NITNYNLIRVGQVLTIPGKTTTPPATAVKYTVKAGDT 305
Query: 67 KEIHRRSLNVFYGRLDKRH 85
R NV L K +
Sbjct: 306 LYGIARKYNVTVSALAKAN 324
>gi|348173142|ref|ZP_08880036.1| secreted protein [Saccharopolyspora spinosa NRRL 18395]
Length = 210
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIV-DVDLVFEGQRLNI 45
G+TL+ I +++GV+ IA N NI+ + DL+F GQRL+I
Sbjct: 170 GDTLSEIGEKFGVTFQEIANRNSNIISNPDLIFPGQRLDI 209
>gi|194017247|ref|ZP_03055859.1| SpoVID-associated morphogenetic protein [Bacillus pumilus ATCC
7061]
gi|194011115|gb|EDW20685.1| SpoVID-associated morphogenetic protein [Bacillus pumilus ATCC
7061]
Length = 425
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G++L ISK+YGV + +N + + DL+ G ++ IPSS
Sbjct: 8 KGDSLWKISKKYGVDFQELKKLNSQLSNPDLIMPGMKIKIPSS 50
>gi|383764409|ref|YP_005443391.1| hypothetical protein CLDAP_34540 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384677|dbj|BAM01494.1| hypothetical protein CLDAP_34540 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 390
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV------REELQATVKNV 60
GETLTSI+++Y V ++ +N I + +L+ GQRL +PS+V R LQ +
Sbjct: 47 GETLTSIARRYDTDVATLMRLN-GIQNPELIRVGQRLAVPSNVAGSGAGRSSLQGSNLQP 105
Query: 61 ISSFDL 66
++FDL
Sbjct: 106 SAAFDL 111
>gi|259907175|ref|YP_002647531.1| N-acetylmuramoyl-L-alanine amidase [Erwinia pyrifoliae Ep1/96]
gi|224962797|emb|CAX54254.1| N-acetylmuramoyl-L-alanine amidase [Erwinia pyrifoliae Ep1/96]
Length = 553
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ YGVS+ ++ A+ N + D+V+ GQRL +P++
Sbjct: 454 RGETLSGIAAHYGVSMATLRAM--NTLKNDVVWVGQRLKVPAA 494
>gi|385786062|ref|YP_005817171.1| N-acetylmuramoyl-L-alanine amidase [Erwinia sp. Ejp617]
gi|310765334|gb|ADP10284.1| N-acetylmuramoyl-L-alanine amidase [Erwinia sp. Ejp617]
Length = 553
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ YGVS+ ++ A+ N + D+V+ GQRL +P++
Sbjct: 454 RGETLSGIAAHYGVSMATLRAM--NTLKNDVVWVGQRLKVPAA 494
>gi|290890734|ref|ZP_06553804.1| hypothetical protein AWRIB429_1194 [Oenococcus oeni AWRIB429]
gi|290479709|gb|EFD88363.1| hypothetical protein AWRIB429_1194 [Oenococcus oeni AWRIB429]
Length = 396
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 357 ASGDTLTSIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 396
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 219 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 258
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 288 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 327
>gi|387869900|ref|YP_005801270.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia pyrifoliae DSM
12163]
gi|283476983|emb|CAY72874.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia pyrifoliae DSM
12163]
Length = 552
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ YGVS+ ++ A+ N + D+V+ GQRL +P++
Sbjct: 453 RGETLSGIAAHYGVSMATLRAM--NTLKNDVVWVGQRLKVPAA 493
>gi|407980782|ref|ZP_11161556.1| SpoVID-associated morphogenetic protein [Bacillus sp. HYC-10]
gi|407412448|gb|EKF34249.1| SpoVID-associated morphogenetic protein [Bacillus sp. HYC-10]
Length = 389
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G++L ISK+YGV + +N + + DL+ G ++ IPSS
Sbjct: 8 KGDSLWKISKKYGVDFQELKKLNSQLSNPDLIMPGMKIKIPSS 50
>gi|383763893|ref|YP_005442875.1| hypothetical protein CLDAP_29380 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384161|dbj|BAM00978.1| hypothetical protein CLDAP_29380 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 315
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL 53
GETL+ I+ QYGV++ +I N I + + ++ GQRL IP +V +
Sbjct: 61 GETLSKIAAQYGVTIQAIMQAN-GIWNPNRIYAGQRLCIPGAVMPPI 106
>gi|403237643|ref|ZP_10916229.1| spore coat assembly protein SafA [Bacillus sp. 10403023]
Length = 499
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS---VREELQ 54
+G+TL I+K+YGV + AVN + + D++ G ++ +P+ V++E Q
Sbjct: 8 KGDTLWEIAKKYGVDFQELKAVNTQLSNPDMIMPGMKIKVPTGTVHVKKEAQ 59
>gi|238755898|ref|ZP_04617226.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia ruckeri ATCC
29473]
gi|238705857|gb|EEP98246.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia ruckeri ATCC
29473]
Length = 588
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ ++ N + D+V+ GQRL IP++
Sbjct: 477 RGETLSGIASQYGVSMAAMR--QNNTLRKDVVWVGQRLRIPAA 517
>gi|456013915|gb|EMF47552.1| N-acetylmuramoyl-L-alanine amidase [Planococcus halocryophilus Or1]
Length = 398
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
G+TL I+++Y V+V ++A N NI + +L++ GQ L IP VK + + D
Sbjct: 247 GDTLYGIARKYNVTVSALAKAN-NITNYNLIYVGQVLTIPGKTTTPPAIAVKYTVKAGDT 305
Query: 67 KEIHRRSLNVFYGRLDKRH 85
R NV L K +
Sbjct: 306 LYSIARKYNVTISELAKAN 324
>gi|389572009|ref|ZP_10162097.1| spoVID-associated morphogenetic protein [Bacillus sp. M 2-6]
gi|388428495|gb|EIL86292.1| spoVID-associated morphogenetic protein [Bacillus sp. M 2-6]
Length = 398
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G++L ISK+YGV + +N + + DL+ G ++ IPSS
Sbjct: 8 KGDSLWKISKKYGVDFQELKKLNSQLSNPDLIMPGMKIKIPSS 50
>gi|157693186|ref|YP_001487648.1| SpoVID-associated morphogenetic protein [Bacillus pumilus
SAFR-032]
gi|157681944|gb|ABV63088.1| SpoVID-associated morphogenetic protein [Bacillus pumilus
SAFR-032]
Length = 414
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G++L ISK+YGV + +N + + DL+ G ++ IPSS
Sbjct: 8 KGDSLWKISKKYGVDFQELKKLNSQLSNPDLIMPGMKIKIPSS 50
>gi|313680993|ref|YP_004058732.1| peptidase m23 [Oceanithermus profundus DSM 14977]
gi|313153708|gb|ADR37559.1| Peptidase M23 [Oceanithermus profundus DSM 14977]
Length = 330
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GETL I++ YGV + ++AA N I DV+ + GQRL IPS
Sbjct: 26 GETLYRIARTYGVPLEALAAAN-GIEDVNRIRAGQRLVIPS 65
>gi|345023347|ref|ZP_08786960.1| hypothetical protein OTW25_18913 [Ornithinibacillus scapharcae
TW25]
Length = 325
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE-ELQATVKNVISSF 64
+G+TL +SK+YGV + A N + D+V G ++ IP++ + + +A + NV
Sbjct: 8 KGDTLWELSKKYGVDYEELLAANSHFSSPDMVMPGMKIRIPTTAKAVKKEAPIMNVQKEA 67
Query: 65 DL-------------KEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPSF 105
+ K+I + L V + D + M++ +P ++P
Sbjct: 68 PIMNAKEQPKVEQPYKDISPKPLPVI--KEDDKKPIMEVKPEMPLPQMPQMPQL 119
>gi|389775365|ref|ZP_10193331.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter spathiphylli B39]
gi|388437406|gb|EIL94207.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter spathiphylli B39]
Length = 495
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GRGE+L+SI++QYGVSV ++ N N + + V G L IP+
Sbjct: 454 GRGESLSSIARQYGVSVGALK--NANQISSNTVRAGTTLTIPA 494
>gi|345018480|ref|YP_004820833.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033823|gb|AEM79549.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 327
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K + +V +I N +I D +L++ GQR+ IP+S +E
Sbjct: 263 GDTLWNIAKAFNTTVDAILKANPDIKDPNLIYPGQRIIIPTSSQE 307
>gi|402572177|ref|YP_006621520.1| carboxypeptidase [Desulfosporosinus meridiei DSM 13257]
gi|402253374|gb|AFQ43649.1| putative carboxypeptidase [Desulfosporosinus meridiei DSM 13257]
Length = 350
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+GETL +I+K+YG++ ++ A N +I + L+ GQ +NIP R +Q T+ S+
Sbjct: 8 KGETLYNIAKKYGINFNALLAANSSIRNPALIQPGQVINIP---RPAVQRTIVIPRESYG 64
Query: 66 LKEIHR--RSLNVFYGRLDKRHISMQITHR 93
E+ +SL Y ++ I + R
Sbjct: 65 YNEMLNDLQSLEELYPFIEVNSIGSTVMGR 94
>gi|332798604|ref|YP_004460103.1| peptidoglycan-binding lysin domain-containing protein
[Tepidanaerobacter acetatoxydans Re1]
gi|438001586|ref|YP_007271329.1| hypothetical protein TEPIRE1_6760 [Tepidanaerobacter
acetatoxydans Re1]
gi|332696339|gb|AEE90796.1| Peptidoglycan-binding lysin domain protein [Tepidanaerobacter
acetatoxydans Re1]
gi|432178380|emb|CCP25353.1| hypothetical protein TEPIRE1_6760 [Tepidanaerobacter
acetatoxydans Re1]
Length = 227
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TLT ++ +YG +V +I N N+VD DL+ GQ L IP S
Sbjct: 8 KGDTLTLLAARYGTTVEAIMTAN-NLVDPDLIIVGQVLLIPVS 49
>gi|389820405|ref|ZP_10209705.1| polysaccharide deacetylase [Planococcus antarcticus DSM 14505]
gi|388462909|gb|EIM05295.1| polysaccharide deacetylase [Planococcus antarcticus DSM 14505]
Length = 340
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD- 65
G+TL SI+K+Y V+V ++A N NI++ +L+ GQ L IP+ +VK + + D
Sbjct: 245 GDTLYSIAKKYNVTVAALAKAN-NIINYNLIQVGQVLTIPNQTTAPPVTSVKYTVKAGDT 303
Query: 66 LKEIHR 71
L I R
Sbjct: 304 LYSIAR 309
>gi|221632505|ref|YP_002521726.1| LysM domain-containing protein [Thermomicrobium roseum DSM 5159]
gi|221155362|gb|ACM04489.1| LysM domain protein [Thermomicrobium roseum DSM 5159]
Length = 464
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GE LTSI+++YGVSV SI N+ + D D + GQ L IPS
Sbjct: 172 GERLTSIAQRYGVSVESIRQANR-LPDPDRILVGQMLVIPS 211
>gi|365924781|ref|ZP_09447544.1| peptidoglycan binding protein, LysM domain containing protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 208
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K+YG S+ ++A N NI + DL++ QR+N+ S E
Sbjct: 48 NGDTLWAIAKKYGTSISNLAKSN-NIANPDLIYVNQRINVSGSGTE 92
>gi|87303071|ref|ZP_01085869.1| Peptidoglycan-binding LysM [Synechococcus sp. WH 5701]
gi|87282238|gb|EAQ74198.1| Peptidoglycan-binding LysM [Synechococcus sp. WH 5701]
Length = 390
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GETL+ I+++YG+SV + +N + D DLV GQRL +P+
Sbjct: 87 GETLSEIAERYGLSVQKLMELN-GLKDADLVQVGQRLKVPT 126
>gi|238787536|ref|ZP_04631334.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia frederiksenii
ATCC 33641]
gi|238724323|gb|EEQ15965.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia frederiksenii
ATCC 33641]
Length = 622
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 518 RGETLSGIANQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 558
>gi|238797611|ref|ZP_04641108.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia mollaretii ATCC
43969]
gi|238718608|gb|EEQ10427.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia mollaretii ATCC
43969]
Length = 632
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 516 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 556
>gi|162418625|ref|YP_001605282.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis Angola]
gi|162351440|gb|ABX85388.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
Angola]
Length = 631
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 525 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 565
>gi|22124541|ref|NP_667964.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis KIM10+]
gi|45440380|ref|NP_991919.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis biovar Microtus
str. 91001]
gi|108809904|ref|YP_653820.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Antiqua]
gi|145600851|ref|YP_001164927.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Pestoides F]
gi|270489071|ref|ZP_06206145.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis KIM D27]
gi|384137648|ref|YP_005520350.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
A1122]
gi|420544817|ref|ZP_15043007.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-01]
gi|420550128|ref|ZP_15047759.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-02]
gi|420555576|ref|ZP_15052607.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-03]
gi|420561226|ref|ZP_15057523.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-04]
gi|420566266|ref|ZP_15062070.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-05]
gi|420571888|ref|ZP_15067179.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-06]
gi|420577238|ref|ZP_15072013.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-07]
gi|420582581|ref|ZP_15076880.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-08]
gi|420598713|ref|ZP_15091392.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-11]
gi|420604248|ref|ZP_15096323.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-12]
gi|420609582|ref|ZP_15101168.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-13]
gi|420614844|ref|ZP_15105858.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-14]
gi|420620296|ref|ZP_15110611.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-15]
gi|420625341|ref|ZP_15115184.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-16]
gi|420630498|ref|ZP_15119865.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-19]
gi|420641229|ref|ZP_15129500.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-29]
gi|420646385|ref|ZP_15134231.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-32]
gi|420652035|ref|ZP_15139294.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-34]
gi|420657477|ref|ZP_15144205.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-36]
gi|420662818|ref|ZP_15148970.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-42]
gi|420667803|ref|ZP_15153478.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-45]
gi|420673110|ref|ZP_15158305.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-46]
gi|420678613|ref|ZP_15163314.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-47]
gi|420683844|ref|ZP_15168015.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-48]
gi|420689012|ref|ZP_15172609.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-52]
gi|420694813|ref|ZP_15177679.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-53]
gi|420700088|ref|ZP_15182291.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-54]
gi|420706243|ref|ZP_15187167.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-55]
gi|420711530|ref|ZP_15191966.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-56]
gi|420716900|ref|ZP_15196722.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-58]
gi|420722545|ref|ZP_15201529.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-59]
gi|420728185|ref|ZP_15206541.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-60]
gi|420733279|ref|ZP_15211130.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-61]
gi|420738746|ref|ZP_15216068.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-63]
gi|420743992|ref|ZP_15220764.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-64]
gi|420749862|ref|ZP_15225694.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-65]
gi|420754935|ref|ZP_15230234.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-66]
gi|420761036|ref|ZP_15235082.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-71]
gi|420766209|ref|ZP_15239765.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-72]
gi|420771254|ref|ZP_15244279.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-76]
gi|420776547|ref|ZP_15249056.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-88]
gi|420792945|ref|ZP_15263568.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-91]
gi|420798117|ref|ZP_15268212.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-92]
gi|420803462|ref|ZP_15273024.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-93]
gi|420808649|ref|ZP_15277721.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-94]
gi|420814436|ref|ZP_15282898.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-95]
gi|420819566|ref|ZP_15287555.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-96]
gi|420824656|ref|ZP_15292104.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-98]
gi|420830467|ref|ZP_15297352.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-99]
gi|420835298|ref|ZP_15301703.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-100]
gi|420840420|ref|ZP_15306345.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-101]
gi|420846030|ref|ZP_15311426.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-102]
gi|420851370|ref|ZP_15316193.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-103]
gi|420856965|ref|ZP_15320901.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-113]
gi|421761798|ref|ZP_16198598.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
INS]
gi|21957339|gb|AAM84215.1|AE013665_4 N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis KIM10+]
gi|45435236|gb|AAS60796.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Microtus str. 91001]
gi|108781817|gb|ABG15875.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Antiqua]
gi|145212547|gb|ABP41954.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Pestoides F]
gi|270337575|gb|EFA48352.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis KIM D27]
gi|342852777|gb|AEL71330.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
A1122]
gi|391432629|gb|EIQ94049.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-01]
gi|391433705|gb|EIQ94998.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-02]
gi|391436367|gb|EIQ97329.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-03]
gi|391448633|gb|EIR08428.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-04]
gi|391449402|gb|EIR09130.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-05]
gi|391451780|gb|EIR11246.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-06]
gi|391464705|gb|EIR22964.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-07]
gi|391466295|gb|EIR24382.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-08]
gi|391482731|gb|EIR39157.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-12]
gi|391482922|gb|EIR39328.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-11]
gi|391496921|gb|EIR51826.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-13]
gi|391497714|gb|EIR52546.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-15]
gi|391501357|gb|EIR55772.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-14]
gi|391512587|gb|EIR65889.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-16]
gi|391514203|gb|EIR67337.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-19]
gi|391528148|gb|EIR79994.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-29]
gi|391530975|gb|EIR82510.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-34]
gi|391532299|gb|EIR83709.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-32]
gi|391545172|gb|EIR95294.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-36]
gi|391546848|gb|EIR96801.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-42]
gi|391547694|gb|EIR97568.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-45]
gi|391561350|gb|EIS09891.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-46]
gi|391562458|gb|EIS10867.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-47]
gi|391564629|gb|EIS12820.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-48]
gi|391576703|gb|EIS23221.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-52]
gi|391577507|gb|EIS23919.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-53]
gi|391588800|gb|EIS33778.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-55]
gi|391591918|gb|EIS36424.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-54]
gi|391592762|gb|EIS37146.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-56]
gi|391605734|gb|EIS48571.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-60]
gi|391607450|gb|EIS50049.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-58]
gi|391608091|gb|EIS50618.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-59]
gi|391620228|gb|EIS61404.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-61]
gi|391621163|gb|EIS62243.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-63]
gi|391629581|gb|EIS69489.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-64]
gi|391631744|gb|EIS71343.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-65]
gi|391642954|gb|EIS81170.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-71]
gi|391645748|gb|EIS83594.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-72]
gi|391648762|gb|EIS86238.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-66]
gi|391655472|gb|EIS92211.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-76]
gi|391662379|gb|EIS98317.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-88]
gi|391672904|gb|EIT07675.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-91]
gi|391686701|gb|EIT20096.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-93]
gi|391688190|gb|EIT21428.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-92]
gi|391689472|gb|EIT22598.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-94]
gi|391700869|gb|EIT32927.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-95]
gi|391704003|gb|EIT35696.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-96]
gi|391704788|gb|EIT36416.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-98]
gi|391715418|gb|EIT45972.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-99]
gi|391720319|gb|EIT50354.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-100]
gi|391720925|gb|EIT50913.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-101]
gi|391731485|gb|EIT60186.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-102]
gi|391734004|gb|EIT62316.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-103]
gi|391737348|gb|EIT65244.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-113]
gi|411178120|gb|EKS48132.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
INS]
Length = 637
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 531 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 571
>gi|15613784|ref|NP_242087.1| hypothetical protein BH1221 [Bacillus halodurans C-125]
gi|10173837|dbj|BAB04940.1| BH1221 [Bacillus halodurans C-125]
Length = 444
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+G+TL ++K+YGV + A N + + D++ G ++ IP+
Sbjct: 8 KGDTLWKLAKKYGVDFEQLKAANSQLANPDMIMPGMKIKIPT 49
>gi|386311051|ref|YP_006007107.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551882|ref|ZP_20507922.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica IP
10393]
gi|318607424|emb|CBY28922.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|431787180|emb|CCO70962.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica IP
10393]
Length = 645
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 536 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 576
>gi|304391790|ref|ZP_07373732.1| peptidase M23B [Ahrensia sp. R2A130]
gi|303296019|gb|EFL90377.1| peptidase M23B [Ahrensia sp. R2A130]
Length = 523
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RGETL ++S+++GV V ++ N NI + D V G R+NIPS
Sbjct: 207 RGETLYNLSRRFGVPVSALMTAN-NIKNADDVQAGTRINIPS 247
>gi|108813461|ref|YP_649228.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Nepal516]
gi|108777109|gb|ABG19628.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Nepal516]
Length = 637
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 531 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 571
>gi|186893781|ref|YP_001870893.1| cell wall hydrolase/autolysin [Yersinia pseudotuberculosis PB1/+]
gi|186696807|gb|ACC87436.1| cell wall hydrolase/autolysin [Yersinia pseudotuberculosis PB1/+]
Length = 637
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 531 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 571
>gi|172056532|ref|YP_001812992.1| polysaccharide deacetylase [Exiguobacterium sibiricum 255-15]
gi|171989053|gb|ACB59975.1| polysaccharide deacetylase [Exiguobacterium sibiricum 255-15]
Length = 340
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL SI+ +YGV+V ++A+ NK I +V+L+ GQ L IP
Sbjct: 301 GDTLYSIATKYGVTVTALASANK-ITNVNLISVGQVLVIP 339
>gi|381402964|ref|ZP_09927648.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. Sc1]
gi|380736163|gb|EIB97226.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. Sc1]
Length = 553
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVI 61
RGETL+ I+ +YGVS+ ++ + N + D+V+ GQRL +P+S + V+
Sbjct: 454 RGETLSGIAAKYGVSMATLREL--NTLKRDVVWVGQRLKVPASATASRTTRARGVV 507
>gi|307946880|ref|ZP_07662215.1| lipoprotein NlpD [Roseibium sp. TrichSKD4]
gi|307770544|gb|EFO29770.1| lipoprotein NlpD [Roseibium sp. TrichSKD4]
Length = 585
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISS 63
G+TL S+S+++GV V ++AAVN I D V GQ L IP+ V T +SS
Sbjct: 217 GDTLHSMSRRFGVPVNAVAAVN-GISDPSQVRAGQTLIIPTYVYSSRNGTTDATVSS 272
>gi|56962267|ref|YP_173991.1| cell wall-binding protein [Bacillus clausii KSM-K16]
gi|56908503|dbj|BAD63030.1| cell wall-binding protein [Bacillus clausii KSM-K16]
Length = 193
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL+SI+ VSV ++ N I D +L+F GQ LN+P +
Sbjct: 28 GDTLSSIANNNQVSVTALMEANPQISDKNLIFAGQELNMPGA 69
>gi|332160019|ref|YP_004296596.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|418239918|ref|ZP_12866462.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|325664249|gb|ADZ40893.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330862100|emb|CBX72266.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia enterocolitica
W22703]
gi|351780744|gb|EHB22809.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 621
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 512 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 552
>gi|238784777|ref|ZP_04628779.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia bercovieri ATCC
43970]
gi|238714290|gb|EEQ06300.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia bercovieri ATCC
43970]
Length = 627
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISS 63
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S + T K S+
Sbjct: 516 RGETLSGIASQYGVSMALLR--QSNTLKNDVVWVGQRLKVPASGSAVVAVTPKATASA 571
>gi|51594774|ref|YP_068965.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pseudotuberculosis IP
32953]
gi|153949299|ref|YP_001402610.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pseudotuberculosis IP
31758]
gi|51588056|emb|CAH19662.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pseudotuberculosis IP 32953]
gi|152960794|gb|ABS48255.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia
pseudotuberculosis IP 31758]
Length = 593
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 487 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 527
>gi|288555339|ref|YP_003427274.1| spoVID-dependent spore coat assembly factor SafA [Bacillus
pseudofirmus OF4]
gi|288546499|gb|ADC50382.1| spoVID-dependent spore coat assembly factor SafA [Bacillus
pseudofirmus OF4]
Length = 479
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS---VRE----ELQATVK 58
+G+TL +SK+YGV + A N + + D++ G ++ IPS+ V+ + QA +
Sbjct: 8 KGDTLWKLSKKYGVDFEQLKAANTQLSNPDMIMPGMKIKIPSNSVPVKNDTIAQTQAIKE 67
Query: 59 NVISSFDLKEIHRRSLNVFYGRLDKRHISM------QITHRLPHIWRNRLPSFDLKE--- 109
+ KE+ + + K+ + Q+ ++P + ++P +++
Sbjct: 68 QPMVQMAPKEMPKE----MPKEMPKKEAPVTPAPAPQVQMQMPKMEMPKMPQPTIQQKPT 123
Query: 110 --TLQHSLNIFY 119
+ ++N+F+
Sbjct: 124 TKNYETNMNVFF 135
>gi|238750068|ref|ZP_04611571.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia rohdei ATCC
43380]
gi|238711612|gb|EEQ03827.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia rohdei ATCC
43380]
Length = 609
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 504 RGETLSGIASQYGVSMAVLR--QSNTLKNDVVWVGQRLKVPAS 544
>gi|150260586|ref|ZP_01917314.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis CA88-4125]
gi|165926736|ref|ZP_02222568.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165936387|ref|ZP_02224955.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011877|ref|ZP_02232775.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166213987|ref|ZP_02240022.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400595|ref|ZP_02306104.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167418853|ref|ZP_02310606.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423236|ref|ZP_02314989.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167470468|ref|ZP_02335172.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
FV-1]
gi|218927573|ref|YP_002345448.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pestis CO92]
gi|229836630|ref|ZP_04456796.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis Pestoides A]
gi|229840242|ref|ZP_04460401.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842320|ref|ZP_04462475.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903941|ref|ZP_04519054.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis Nepal516]
gi|294502479|ref|YP_003566541.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Z176003]
gi|384120913|ref|YP_005503533.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis D106004]
gi|384124792|ref|YP_005507406.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis D182038]
gi|384413260|ref|YP_005622622.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420587720|ref|ZP_15081521.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-09]
gi|420593035|ref|ZP_15086303.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-10]
gi|420782053|ref|ZP_15253888.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-89]
gi|420787498|ref|ZP_15258659.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-90]
gi|115346184|emb|CAL19052.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis CO92]
gi|149289994|gb|EDM40071.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis CA88-4125]
gi|165915503|gb|EDR34112.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. IP275]
gi|165921359|gb|EDR38583.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989236|gb|EDR41537.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204782|gb|EDR49262.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962847|gb|EDR58868.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049963|gb|EDR61371.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057406|gb|EDR67152.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|229679711|gb|EEO75814.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis Nepal516]
gi|229690630|gb|EEO82684.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696608|gb|EEO86655.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706314|gb|EEO92322.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis Pestoides A]
gi|262360509|gb|ACY57230.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis D106004]
gi|262364456|gb|ACY61013.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis D182038]
gi|294352938|gb|ADE63279.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Z176003]
gi|320013764|gb|ADV97335.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|391468326|gb|EIR26210.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-09]
gi|391481831|gb|EIR38328.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-10]
gi|391667356|gb|EIT02700.1| N-acetylmuramoyl-L-alanine amidase AmiB domain protein [Yersinia
pestis PY-89]
gi|391668991|gb|EIT04170.1| N-acetylmuramoyl-L-alanine amidase family protein [Yersinia pestis
PY-90]
Length = 593
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 487 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAS 527
>gi|225181544|ref|ZP_03734986.1| Peptidoglycan-binding LysM [Dethiobacter alkaliphilus AHT 1]
gi|225167792|gb|EEG76601.1| Peptidoglycan-binding LysM [Dethiobacter alkaliphilus AHT 1]
Length = 550
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL I+K++ V+V I A N +I D +++F GQ++ IP
Sbjct: 509 GDTLFKIAKKFSVTVDEILAANPDITDPNVIFPGQKIFIP 548
>gi|330443989|ref|YP_004376975.1| N-acetylmuramoyl-L-Ala amidase [Chlamydophila pecorum E58]
gi|328807099|gb|AEB41272.1| N-acetylmuramoyl-L-Ala amidase [Chlamydophila pecorum E58]
Length = 199
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+ L+SI+K+Y +SV + +NK ++ DL++ GQRL +P
Sbjct: 158 GDNLSSIAKKYKISVNELKKINK--LNSDLIYTGQRLCLP 195
>gi|251794894|ref|YP_003009625.1| glycoside hydrolase [Paenibacillus sp. JDR-2]
gi|247542520|gb|ACS99538.1| glycoside hydrolase family 18 [Paenibacillus sp. JDR-2]
Length = 428
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
GETL +IS++YGV++ +A VN +I + L+ G RL IP+ + ++A
Sbjct: 58 GETLWTISQKYGVTLQELARVN-HITNPALILPGMRLRIPNPRKMTIEA 105
>gi|406868588|gb|EKD21625.1| uridine kinase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1466
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+T I+ QY +V +I A N I D D+++ GQ +NIP
Sbjct: 1363 GDTFEKIAAQYRQTVPAIIAANPQIADPDVLYSGQVINIP 1402
>gi|242237984|ref|YP_002986165.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech703]
gi|242130041|gb|ACS84343.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech703]
Length = 563
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
RGETL+ I+ QYGVS+ ++ +N + D+V+ GQRL IP
Sbjct: 456 ARGETLSGIAAQYGVSMSTLRDLNS--LKNDVVWVGQRLKIP 495
>gi|168057639|ref|XP_001780821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667756|gb|EDQ54378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREE 52
+G+TL SISK YGVS+ +I A N I D + + EG + +P E
Sbjct: 162 KGDTLYSISKHYGVSIEAIQAAN-GIDDPNFIHEGDHICLPEKTAHE 207
>gi|19552957|ref|NP_600959.1| hypothetical protein NCgl1682 [Corynebacterium glutamicum ATCC
13032]
gi|62390634|ref|YP_226036.1| lysin [Corynebacterium glutamicum ATCC 13032]
gi|21324522|dbj|BAB99146.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325972|emb|CAF20135.1| putative lysin [Corynebacterium glutamicum ATCC 13032]
gi|385143863|emb|CCH24902.1| hypothetical protein WA5_1682 [Corynebacterium glutamicum K051]
Length = 192
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
GETL+SIS+ GV V I NK +VD DL++ G L IP+ +EL A ++
Sbjct: 143 NGETLSSISQDSGVPVGLIIDRNK-LVDPDLIYAGTPLAIPT--EQELAAAIQ 192
>gi|291619093|ref|YP_003521835.1| AmiB [Pantoea ananatis LMG 20103]
gi|378765476|ref|YP_005193935.1| N-acetylmuramoyl-L-alanine amidase [Pantoea ananatis LMG 5342]
gi|386017345|ref|YP_005935643.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis AJ13355]
gi|386077727|ref|YP_005991252.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis PA13]
gi|291154123|gb|ADD78707.1| AmiB [Pantoea ananatis LMG 20103]
gi|327395425|dbj|BAK12847.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pantoea ananatis
AJ13355]
gi|354986908|gb|AER31032.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis PA13]
gi|365184948|emb|CCF07898.1| N-acetylmuramoyl-L-alanine amidase [Pantoea ananatis LMG 5342]
Length = 558
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ + N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMATLRQM--NTLKRDVVWVGQRLKVPAS 495
>gi|256752566|ref|ZP_05493421.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748563|gb|EEU61612.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
Length = 327
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K + ++ +I N +I D +L++ GQR+ IP+S +E
Sbjct: 263 GDTLWNIAKTFNTTIDAILKANPDIKDPNLIYPGQRIIIPTSSQE 307
>gi|238764689|ref|ZP_04625633.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia kristensenii ATCC
33638]
gi|238697085|gb|EEP89858.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia kristensenii ATCC
33638]
Length = 613
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P+S
Sbjct: 505 RGETLSGIASQYGVSMALLR--QNNTLKNDVVWVGQRLKVPAS 545
>gi|378581307|ref|ZP_09829955.1| N-acetylmuramoyl-l-alanine amidase II [Pantoea stewartii subsp.
stewartii DC283]
gi|377816042|gb|EHT99149.1| N-acetylmuramoyl-l-alanine amidase II [Pantoea stewartii subsp.
stewartii DC283]
Length = 558
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
RGETL+ I+ +YGVS+ ++ + N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMATLRQM--NTLKRDVVWVGQRLKVPASA 496
>gi|89097516|ref|ZP_01170405.1| hypothetical protein B14911_27995 [Bacillus sp. NRRL B-14911]
gi|89087812|gb|EAR66924.1| hypothetical protein B14911_27995 [Bacillus sp. NRRL B-14911]
Length = 207
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREE 52
+G+T+ I++QY + I +N +I + ++ GQR+ IPS+ E+
Sbjct: 35 KGDTMWKIAQQYQAGITEIINLNSHITNPHFIYPGQRITIPSAAAEQ 81
>gi|296331671|ref|ZP_06874140.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675370|ref|YP_003867042.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151266|gb|EFG92146.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413614|gb|ADM38733.1| morphogenetic protein associated with SpoVID [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 386
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQA 55
+G++L I+++YGV + + +N + + DL+ G ++ +PS VR+E +A
Sbjct: 8 KGDSLLKIAEKYGVDIEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKA 60
>gi|410455207|ref|ZP_11309090.1| NLP/P60 protein [Bacillus bataviensis LMG 21833]
gi|409929405|gb|EKN66483.1| NLP/P60 protein [Bacillus bataviensis LMG 21833]
Length = 399
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS----SVREELQATVKNVI 61
+G+TL+ I+ QY SV I N+N + DL++E Q L I + + E +Q T V+
Sbjct: 32 KGDTLSKIASQYKTSVNEIK--NQNGLTSDLIYENQFLQISTGPKATTVEAVQQTTYTVV 89
Query: 62 SSFDLKEIHRRSLNVFYGRLDK 83
S L +I R NV G L +
Sbjct: 90 SGDALIKIANR-YNVTVGELQQ 110
>gi|170026017|ref|YP_001722522.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pseudotuberculosis
YPIII]
gi|169752551|gb|ACA70069.1| N-acetylmuramoyl-L-alanine amidase [Yersinia pseudotuberculosis
YPIII]
Length = 637
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+++ GQRL +P+S
Sbjct: 531 RGETLSGIASQYGVSMAVLR--QNNTLKNDVIWVGQRLKVPAS 571
>gi|410583930|ref|ZP_11321035.1| spore coat assembly protein SafA [Thermaerobacter subterraneus DSM
13965]
gi|410504792|gb|EKP94302.1| spore coat assembly protein SafA [Thermaerobacter subterraneus DSM
13965]
Length = 345
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
G+TL I++++GV++ ++ A N I + L+F GQ++ +P+ V
Sbjct: 78 GDTLFLIAQRFGVTLQALIAANPQIPNPSLIFPGQQICVPTGV 120
>gi|256752037|ref|ZP_05492905.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749047|gb|EEU62083.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 142
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+T+ SI+ +GVS+ ++ N I D +L++ GQ++ IPS+
Sbjct: 99 GDTMWSIANMFGVSLDALIRANPQIPDPNLIYPGQQICIPSA 140
>gi|167037559|ref|YP_001665137.1| peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115974|ref|YP_004186133.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856393|gb|ABY94801.1| Peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929065|gb|ADV79750.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 142
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+T+ SI+ +GVS+ ++ N I D +L++ GQ++ IPS+
Sbjct: 99 GDTMWSIANMFGVSLDALIRANPQIPDPNLIYPGQQICIPSA 140
>gi|375008324|ref|YP_004981957.1| cell wall hydrolase SleB [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359287173|gb|AEV18857.1| Cell wall hydrolase SleB [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 218
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+G+TL+ I+KQY +V S+ +N + D ++ G+RL +P++ + A K S
Sbjct: 38 KGDTLSKIAKQYHTTVASLKLLNH--LKSDAIYAGERLKVPAAAKRSASAPAKK--KSIS 93
Query: 66 LKEIHRRSL 74
L R+ L
Sbjct: 94 LSAADRKLL 102
>gi|333397847|ref|ZP_08479660.1| peptidoglycan-binding protein [Leuconostoc gelidum KCTC 3527]
gi|406600657|ref|YP_006746003.1| peptidoglycan-binding protein [Leuconostoc gelidum JB7]
gi|406372192|gb|AFS41117.1| peptidoglycan-binding protein [Leuconostoc gelidum JB7]
Length = 206
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP--SSVREELQ 54
G+TL ISK++ V+V IAA N NI +VD++ GQ L S+V ++Q
Sbjct: 45 GDTLNKISKEFNVAVAQIAA-NNNISNVDVILVGQHLTFAEKSAVAAQVQ 93
>gi|443314156|ref|ZP_21043740.1| metalloendopeptidase-like membrane protein [Leptolyngbya sp. PCC
6406]
gi|442786244|gb|ELR96000.1| metalloendopeptidase-like membrane protein [Leptolyngbya sp. PCC
6406]
Length = 717
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
RGETL++I++QYG+S +A N +I + + +F G+ L IP S +
Sbjct: 329 RGETLSTIARQYGISTTELARAN-SISNPNRIFVGRTLVIPQSAPQ 373
>gi|261419548|ref|YP_003253230.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC61]
gi|297530482|ref|YP_003671757.1| cell wall hydrolase SleB [Geobacillus sp. C56-T3]
gi|319766364|ref|YP_004131865.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC52]
gi|261376005|gb|ACX78748.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC61]
gi|297253734|gb|ADI27180.1| cell wall hydrolase SleB [Geobacillus sp. C56-T3]
gi|317111230|gb|ADU93722.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC52]
Length = 216
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+G+TL+ I+KQY +V S+ +N + D ++ G+RL +P++ + A K S
Sbjct: 36 KGDTLSKIAKQYHTTVASLKLLNH--LKSDAIYAGERLKVPAAAKRSASAPAKK--KSIS 91
Query: 66 LKEIHRRSL 74
L R+ L
Sbjct: 92 LSAADRKLL 100
>gi|289578334|ref|YP_003476961.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
gi|289528047|gb|ADD02399.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+T+ SI+ +GVS+ ++ N I D +L++ GQ++ IPS+
Sbjct: 158 GDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIPSA 199
>gi|372276516|ref|ZP_09512552.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. SL1_M5]
Length = 556
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ + N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMATLREM--NTLKRDVVWVGQRLKVPAS 495
>gi|409198246|ref|ZP_11226909.1| hypothetical protein MsalJ2_14471 [Marinilabilia salmonicolor JCM
21150]
Length = 327
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNI-----VDVDLVFEGQRLNIPSSVREEL 53
G+TLTSIS +YGVS+ SI N I D +F G++L +P ++++ +
Sbjct: 69 GDTLTSISGKYGVSIQSIMDANSGIDWEGERKGDRIFAGEKLELPRALKQPI 120
>gi|338530979|ref|YP_004664313.1| LysM domain-containing protein [Myxococcus fulvus HW-1]
gi|337257075|gb|AEI63235.1| LysM domain-containing protein [Myxococcus fulvus HW-1]
Length = 235
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL+ ++++Y SV ++ N I + DL++ G+ LNIP +
Sbjct: 10 GDTLSHLAQRYNTSVSALMKANPQIKNADLIYAGKSLNIPGA 51
>gi|448237497|ref|YP_007401555.1| putative cell wall hydrolase [Geobacillus sp. GHH01]
gi|445206339|gb|AGE21804.1| putative cell wall hydrolase [Geobacillus sp. GHH01]
Length = 216
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+G+TL+ I+KQY +V S+ +N + D ++ G+RL +P++ + A K S
Sbjct: 36 KGDTLSKIAKQYHTTVASLKLLNH--LKSDAIYAGERLKVPAAAKRSASAPAKK--KSIS 91
Query: 66 LKEIHRRSL 74
L R+ L
Sbjct: 92 LSAADRKLL 100
>gi|398801108|ref|ZP_10560356.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. GM01]
gi|398092750|gb|EJL83156.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. GM01]
Length = 553
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+ + AT
Sbjct: 455 RGETLSGIAAKYGVSMATLREMNS--LKRDVVWVGQRLKVPAKSSVSVAAT 503
>gi|373853966|ref|ZP_09596764.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
gi|372471833|gb|EHP31845.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
Length = 383
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
G+TL +I+KQ+GV V +IAA N NI D + GQ L IP
Sbjct: 258 GDTLGAIAKQHGVKVGAIAAAN-NITDPKKLRVGQELKIP 296
>gi|405356321|ref|ZP_11025341.1| LysM domain protein [Chondromyces apiculatus DSM 436]
gi|397090917|gb|EJJ21758.1| LysM domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 238
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+TL+ ++++Y SV ++ N I + DL++ G+ LNIP +
Sbjct: 10 GDTLSHLAQRYNTSVSALMKANPQIKNADLIYAGKSLNIPGA 51
>gi|332298227|ref|YP_004440149.1| peptidase M23 [Treponema brennaborense DSM 12168]
gi|332181330|gb|AEE17018.1| Peptidase M23 [Treponema brennaborense DSM 12168]
Length = 284
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 2 TFGG------RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP--SSVREEL 53
TFG +GETL SIS+ Y VSV + A N NI +L+ GQ+L IP +
Sbjct: 19 TFGATSHTVAKGETLYSISRTYRVSVAELCAAN-NIKQTELLKAGQKLIIPDEAGATAPS 77
Query: 54 QATVKNVISSFDLKEIHR-RSLNVFYGRLDKRHISM 88
++ N I + E + + + FYG K IS+
Sbjct: 78 RSAAANPIGAEPAAEPYTVQKGDTFYGIARKNGISV 113
>gi|390435531|ref|ZP_10224069.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans IG1]
Length = 556
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ + N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMSTLREM--NTLKRDVVWVGQRLKVPAS 495
>gi|440761034|ref|ZP_20940132.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans 299R]
gi|436425222|gb|ELP22961.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans 299R]
Length = 556
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMDTLRGMNA--LKRDVVWVGQRLKVPAS 495
>gi|304396958|ref|ZP_07378838.1| cell wall hydrolase/autolysin [Pantoea sp. aB]
gi|304355754|gb|EFM20121.1| cell wall hydrolase/autolysin [Pantoea sp. aB]
Length = 556
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMDTLRGMNA--LKRDVVWVGQRLKVPAS 495
>gi|347750968|ref|YP_004858533.1| NLP/P60 protein [Bacillus coagulans 36D1]
gi|347583486|gb|AEO99752.1| NLP/P60 protein [Bacillus coagulans 36D1]
Length = 416
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
G+TL+ ISKQYG++V + ++N + DL++ GQ+L + S + ++ +++ D
Sbjct: 236 GDTLSGISKQYGITVSKLKSLNN--LSSDLIYAGQKLKVTGSPSDSSKS-----VTTVDT 288
Query: 67 KEIHRRSLNVFYGRLDKRHISMQITHRL---PHIWRNRLPS-FD 106
S++ + I + L P++W PS FD
Sbjct: 289 TSGSTHSVSSL----------ISIANSLIGTPYVWGGTSPSGFD 322
>gi|238757516|ref|ZP_04618701.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia aldovae ATCC
35236]
gi|238704278|gb|EEP96810.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia aldovae ATCC
35236]
Length = 630
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ QYGVS+ + N + D+V+ GQRL +P++
Sbjct: 524 RGETLSGIASQYGVSMAVLR--QNNTLKNDVVWVGQRLKVPAT 564
>gi|423558682|ref|ZP_17534984.1| hypothetical protein II3_03886 [Bacillus cereus MC67]
gi|401190936|gb|EJQ97972.1| hypothetical protein II3_03886 [Bacillus cereus MC67]
Length = 265
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++LNIP S++
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLNIPGSMK 78
>gi|415884239|ref|ZP_11546268.1| spore coat assembly protein SafA [Bacillus methanolicus MGA3]
gi|387592034|gb|EIJ84351.1| spore coat assembly protein SafA [Bacillus methanolicus MGA3]
Length = 612
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS---SVREELQAT 56
+G+TL I+K+YGV+ + +N + + D++ G ++ IP+ +V++E T
Sbjct: 8 KGDTLWKIAKKYGVNFEELKKINSQLSNPDMIMPGMKIKIPTGGGTVKKEAPMT 61
>gi|167036871|ref|YP_001664449.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039577|ref|YP_001662562.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
sp. X514]
gi|300915173|ref|ZP_07132488.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307725097|ref|YP_003904848.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|320115293|ref|YP_004185452.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853817|gb|ABY92226.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X514]
gi|166855705|gb|ABY94113.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300888897|gb|EFK84044.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307582158|gb|ADN55557.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|319928384|gb|ADV79069.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 327
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL +I+K + +V I N +I D +L++ GQR+ IP+S +E
Sbjct: 263 GDTLWNIAKTFNTTVDVILKANPDIKDPNLIYPGQRIIIPTSSQE 307
>gi|423719284|ref|ZP_17693466.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368187|gb|EID45462.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 469
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+++YG +V I N+ I D +++F G L IP S
Sbjct: 104 RGETLSQIAERYGTTVQDILRANR-IADPNVIFPGMVLTIPHS 145
>gi|307132707|ref|YP_003884723.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
gi|306530236|gb|ADN00167.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
Length = 558
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GETL+ I+ +YGVS+ +I N+ + D+V+ GQRL IPS
Sbjct: 442 GETLSGIAARYGVSMSAIRDANR--LKKDVVWVGQRLKIPS 480
>gi|336234719|ref|YP_004587335.1| glycoside hydrolase family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361574|gb|AEH47254.1| glycoside hydrolase family 18 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 469
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+++YG +V I N+ I D +++F G L IP S
Sbjct: 104 RGETLSQIAERYGTTVQDILRANR-IADPNVIFPGMVLTIPHS 145
>gi|312110257|ref|YP_003988573.1| glycoside hydrolase family protein [Geobacillus sp. Y4.1MC1]
gi|311215358|gb|ADP73962.1| glycoside hydrolase family 18 [Geobacillus sp. Y4.1MC1]
Length = 469
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+++YG +V I N+ I D +++F G L IP S
Sbjct: 104 RGETLSQIAERYGTTVQDILRANR-IADPNVIFPGMVLTIPHS 145
>gi|423452934|ref|ZP_17429787.1| hypothetical protein IEE_01678 [Bacillus cereus BAG5X1-1]
gi|401139493|gb|EJQ47055.1| hypothetical protein IEE_01678 [Bacillus cereus BAG5X1-1]
Length = 265
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++LNIP S++
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLNIPGSMK 78
>gi|164686315|ref|ZP_02210345.1| hypothetical protein CLOBAR_02753 [Clostridium bartlettii DSM
16795]
gi|164601917|gb|EDQ95382.1| glycosyl hydrolase family 25 [Clostridium bartlettii DSM 16795]
Length = 454
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA----TVKNVIS 62
G+TLTSI+K++ +V IA +N NI + +L++ GQ L I +S+ ++ T+ V
Sbjct: 358 GDTLTSIAKKFNTTVDKIALLN-NITNPNLIYPGQILKIETSINSSIRGYNFNTMYTVQK 416
Query: 63 SFDLKEIHRRSLNVFYGRLDKRH 85
L I R+ L+V Y L +++
Sbjct: 417 GDTLLGISRK-LDVDYKELIQKN 438
>gi|421184095|ref|ZP_15641522.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB318]
gi|399968329|gb|EJO02781.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB318]
Length = 489
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL SI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 450 ASGDTLASIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 489
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 381 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 420
>gi|423458056|ref|ZP_17434853.1| hypothetical protein IEI_01196 [Bacillus cereus BAG5X2-1]
gi|401148440|gb|EJQ55933.1| hypothetical protein IEI_01196 [Bacillus cereus BAG5X2-1]
Length = 265
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNV 60
+ +TL ISKQYGVS+ SI N D F G++LNIP S + +NV
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLNIPGSTKSNEITVRQNV 88
>gi|354558962|ref|ZP_08978215.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353545286|gb|EHC14738.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 47
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
RGE+L I+K+YG +V+ + +N +I + +L++ GQ++ I
Sbjct: 7 RGESLHKIAKRYGTTVHCLIRINPHIYNPNLIYPGQKIQI 46
>gi|42782845|ref|NP_980092.1| cell wall hydrolase [Bacillus cereus ATCC 10987]
gi|42738772|gb|AAS42700.1| cell wall hydrolase, putative [Bacillus cereus ATCC 10987]
Length = 265
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IPSSV
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPSSVN 78
>gi|345857060|ref|ZP_08809515.1| lysM domain protein [Desulfosporosinus sp. OT]
gi|344329905|gb|EGW41228.1| lysM domain protein [Desulfosporosinus sp. OT]
Length = 52
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
+GETL I+ +G +V + ++N +I + DL++ GQR+N+
Sbjct: 7 KGETLHHIAMHHGTTVRRLLSLNPDISNPDLIYPGQRINV 46
>gi|251788129|ref|YP_003002850.1| cell wall hydrolase/autolysin [Dickeya zeae Ech1591]
gi|247536750|gb|ACT05371.1| cell wall hydrolase/autolysin [Dickeya zeae Ech1591]
Length = 560
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GETL+ I+ +YGVS+ +I +N+ + D+V+ GQRL IP+
Sbjct: 444 GETLSGIATRYGVSMDAIREINR--LKKDVVWVGQRLKIPA 482
>gi|91201450|emb|CAJ74510.1| hypothetical protein kuste3747 [Candidatus Kuenenia
stuttgartiensis]
Length = 248
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TL ISK YGVSV SI A N+ I D+ + GQ++ IPS+
Sbjct: 61 KGDTLWRISKNYGVSVESIVAANQ-IKDIRDLKIGQKITIPSN 102
>gi|383762432|ref|YP_005441414.1| hypothetical protein CLDAP_14770 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382700|dbj|BAL99516.1| hypothetical protein CLDAP_14770 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 295
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
GETL SI+++YGVS+ +I A N ++ D + + GQRL IP
Sbjct: 256 GETLFSIAQRYGVSIEAIMAAN-DLRDPNTIVVGQRLLIP 294
>gi|336113316|ref|YP_004568083.1| NLP/P60 protein [Bacillus coagulans 2-6]
gi|335366746|gb|AEH52697.1| NLP/P60 protein [Bacillus coagulans 2-6]
Length = 304
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI---PSSVREELQA 55
G+TL+ ISKQ+G SV + ++N + DL+F GQ+L + PS + + A
Sbjct: 124 GDTLSGISKQFGTSVSKLKSLNN--LSSDLIFAGQKLKVTGSPSGSSKSVTA 173
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL+ ISKQ+G SV + ++N + DL+F GQ+L +
Sbjct: 53 GDTLSGISKQFGTSVSKLKSLNN--LSSDLIFAGQKLKV 89
>gi|419857876|ref|ZP_14380577.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB202]
gi|410497028|gb|EKP88506.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB202]
Length = 359
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL SI+K YGVS+ ++A +N NI + +L++ G L I
Sbjct: 320 ASGDTLASIAKAYGVSISTLAKLN-NISNTNLIYAGTTLKI 359
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TLTSI+K YG +V +IA N NI + D ++ G+ L I
Sbjct: 251 ASGDTLTSIAKAYGTTVSAIATAN-NISNPDYIYVGEVLTI 290
>gi|431759267|ref|ZP_19547882.1| endolysin [Enterococcus faecium E3346]
gi|430626464|gb|ELB63040.1| endolysin [Enterococcus faecium E3346]
Length = 423
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL 53
GETL+SI+ QYG +IA++N +V+ +L++ GQ L + SV +
Sbjct: 335 GETLSSIAYQYGTDYQTIASLN-GLVNPNLIYPGQVLKVNGSVTSNI 380
>gi|425058977|ref|ZP_18462330.1| glycosyl hydrolase family 25 [Enterococcus faecium 504]
gi|403036866|gb|EJY48203.1| glycosyl hydrolase family 25 [Enterococcus faecium 504]
Length = 423
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREEL 53
GETL+SI+ QYG +IA++N +V+ +L++ GQ L + SV +
Sbjct: 335 GETLSSIAYQYGTDYQTIASLN-GLVNPNLIYPGQVLKVNGSVTSNI 380
>gi|312173801|emb|CBX82055.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia amylovora ATCC
BAA-2158]
Length = 551
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVN--KNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ YGVS+ ++ +N KN D+V+ GQRL +P++
Sbjct: 452 RGETLSGIAAHYGVSMATLRGMNHLKN----DVVWVGQRLKVPAA 492
>gi|292489623|ref|YP_003532513.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia amylovora CFBP1430]
gi|292898157|ref|YP_003537526.1| N-acetylmuramoyl-L-alanine amidase [Erwinia amylovora ATCC 49946]
gi|428786595|ref|ZP_19004073.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia amylovora ACW56400]
gi|291198005|emb|CBJ45107.1| N-acetylmuramoyl-L-alanine amidase [Erwinia amylovora ATCC 49946]
gi|291555060|emb|CBA23147.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia amylovora CFBP1430]
gi|426274864|gb|EKV52604.1| N-acetylmuramoyl-l-alanine amidase II [Erwinia amylovora ACW56400]
Length = 551
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Query: 6 RGETLTSISKQYGVSVYSIAAVN--KNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ YGVS+ ++ +N KN D+V+ GQRL +P++
Sbjct: 452 RGETLSGIAAHYGVSMATLRGMNHLKN----DVVWVGQRLKVPAA 492
>gi|228967505|ref|ZP_04128532.1| Spore coat assembly protein exsA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228792160|gb|EEM39735.1| Spore coat assembly protein exsA [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 151
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 3 KGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 62
Query: 65 DLKEIHRRSL 74
+KE+ ++
Sbjct: 63 YVKEVQQKEF 72
>gi|134298572|ref|YP_001112068.1| peptidoglycan-binding LysM [Desulfotomaculum reducens MI-1]
gi|134051272|gb|ABO49243.1| Peptidoglycan-binding LysM [Desulfotomaculum reducens MI-1]
Length = 411
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 30/42 (71%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+T + I++QYG+S+ + +N + +++++ GQ+L +P++
Sbjct: 9 GDTFSKIAQQYGISISELQRLNPQVTNINMINVGQQLTVPNA 50
>gi|308188272|ref|YP_003932403.1| N-acetylmuramoyl-L-alanine amidase [Pantoea vagans C9-1]
gi|308058782|gb|ADO10954.1| N-acetylmuramoyl-L-alanine amidase [Pantoea vagans C9-1]
Length = 556
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+S
Sbjct: 455 RGETLSGIAAKYGVSMDTLREMNT--LKRDVVWVGQRLKVPAS 495
>gi|196019842|ref|XP_002119054.1| predicted protein [Trichoplax adhaerens]
gi|190577156|gb|EDV18460.1| predicted protein [Trichoplax adhaerens]
Length = 240
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
RG+T++ I ++Y +S I +N ++D++ + G+ LNIP +E+++A
Sbjct: 100 RGDTVSDIMEKYKLSEDEIRNLNPQLLDLNRIIAGENLNIPKGSQEKVEA 149
>gi|427439850|ref|ZP_18924414.1| cell wall hydrolase [Pediococcus lolii NGRI 0510Q]
gi|425787982|dbj|GAC45202.1| cell wall hydrolase [Pediococcus lolii NGRI 0510Q]
Length = 472
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+ +T+ ++S++YGVS+ SI ++N + L+F GQ +NIP E + +V + + +
Sbjct: 41 KNDTVWALSQKYGVSIKSIESLNNINQNSHLIFVGQEINIPEKNNAEPKTSVSDKVKADS 100
Query: 66 LKEIHRRSLNVFYGR 80
+ SL+V R
Sbjct: 101 VTVKSGDSLSVIAQR 115
>gi|375261979|ref|YP_005021149.1| hypothetical protein KOX_25995 [Klebsiella oxytoca KCTC 1686]
gi|397659090|ref|YP_006499792.1| hypothetical protein A225_4100 [Klebsiella oxytoca E718]
gi|365911457|gb|AEX06910.1| hypothetical protein KOX_25995 [Klebsiella oxytoca KCTC 1686]
gi|394347310|gb|AFN33431.1| hypothetical protein A225_4100 [Klebsiella oxytoca E718]
Length = 634
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TL++I+K+Y VSV +A +NK I +V+++ G +L IP S
Sbjct: 316 KGDTLSAIAKKYSVSVEKLARINK-IHNVNMLRIGAKLKIPDS 357
>gi|304385148|ref|ZP_07367494.1| cell wall hydrolase [Pediococcus acidilactici DSM 20284]
gi|418069431|ref|ZP_12706709.1| cell wall hydrolase [Pediococcus acidilactici MA18/5M]
gi|304329342|gb|EFL96562.1| cell wall hydrolase [Pediococcus acidilactici DSM 20284]
gi|357536900|gb|EHJ20928.1| cell wall hydrolase [Pediococcus acidilactici MA18/5M]
Length = 473
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+ +T+ ++S++YGVS+ SI ++N + L+F GQ +NIP E + +V + + +
Sbjct: 41 KNDTVWALSQKYGVSIKSIESLNNINQNSHLIFVGQEINIPEKNNAEPKTSVSDKVKADS 100
Query: 66 LKEIHRRSLNVFYGR 80
+ SL+V R
Sbjct: 101 VTVKSGDSLSVIAQR 115
>gi|270291435|ref|ZP_06197657.1| cell wall-associated hydrolase with LysM domain-containing protein
[Pediococcus acidilactici 7_4]
gi|270280281|gb|EFA26117.1| cell wall-associated hydrolase with LysM domain-containing protein
[Pediococcus acidilactici 7_4]
Length = 478
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
+ +T+ ++S++YGVS+ SI ++N + L+F GQ +NIP E + +V + + +
Sbjct: 41 KNDTVWALSQKYGVSIKSIESLNNINQNSHLIFVGQEINIPEKNNAEPKTSVSDKVKADS 100
Query: 66 LKEIHRRSLNVFYGR 80
+ SL+V R
Sbjct: 101 VTVKSGDSLSVIAQR 115
>gi|220931484|ref|YP_002508392.1| peptidase S8/S53 subtilisin kexin sedolisin [Halothermothrix orenii
H 168]
gi|219992794|gb|ACL69397.1| peptidase S8 and S53 subtilisin kexin sedolisin [Halothermothrix
orenii H 168]
Length = 797
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREE--------LQATVK 58
G++L +S +YGVS+ +I +N ++ +++ GQRL IP ++++ ++K
Sbjct: 44 GDSLYKLSNRYGVSISTIKMLNN--LNSSIIYVGQRLKIPVNMKKYKVRPGDTLYLISLK 101
Query: 59 NVISSFDLKEIHRRSLNVFY 78
IS D+KEI+ + N+ +
Sbjct: 102 FNISVKDIKEINNLTSNLIF 121
>gi|116626702|ref|YP_828858.1| lytic transglycosylase catalytic subunit subunit [Candidatus
Solibacter usitatus Ellin6076]
gi|116229864|gb|ABJ88573.1| Lytic transglycosylase, catalytic [Candidatus Solibacter usitatus
Ellin6076]
Length = 550
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 5 GRGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSF 64
G GETL +I K+Y V+ SI A N ++ EG RL IPS+ R E + +
Sbjct: 461 GAGETLGTIGKRYNVTPASIVAANH--LESPQAVEGDRLLIPSAARVEPAPVRRTTAVAA 518
Query: 65 DLKEIHRR 72
K RR
Sbjct: 519 HRKPATRR 526
>gi|118443879|ref|YP_878717.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Clostridium novyi NT]
gi|118134335|gb|ABK61379.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Clostridium novyi NT]
Length = 685
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
R +TL I K YG+S IA +N N+ D +++FE Q+L IP+
Sbjct: 645 RNDTLKKIGKAYGISWRRIAKLN-NLKDPNMIFENQKLLIPA 685
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 8 ETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQAT 56
+TL I YGVS +A NK I + +++FEGQR+ IP ++AT
Sbjct: 593 DTLRKIGNAYGVSWRELANYNK-IANPNMIFEGQRILIPKKQNSNVRAT 640
>gi|254443434|ref|ZP_05056910.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
gi|198257742|gb|EDY82050.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
Length = 419
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+GETLT I++ Y V+V +I + N+ I + + + GQ+L IP++
Sbjct: 87 KGETLTEIAQAYKVTVEAIKSANQ-ITNANQIVAGQQLTIPAA 128
>gi|442317463|ref|YP_007357484.1| LysM domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485105|gb|AGC41800.1| LysM domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 231
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+ L++++K+YG +V ++ N I + DL++ G L IP +
Sbjct: 8 GDNLSTLAKRYGTTVNALMEANPQIKNADLIYTGDTLKIPGA 49
>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 324
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVIS 62
GE+L +I++++ +V +I N I D +L++ GQR+ IP+S + AT + +I+
Sbjct: 261 GESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIPTS---QQAATSQEIIT 313
>gi|330752586|emb|CBL87532.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [uncultured
Flavobacteriia bacterium]
Length = 257
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
+G+TL SISKQYGVS+ ++ VN+ + ++F Q L IP
Sbjct: 216 KGDTLYSISKQYGVSLDNLVRVNR--IKDQIIFLDQELKIP 254
>gi|326693466|ref|ZP_08230471.1| hypothetical protein LargK3_07062 [Leuconostoc argentinum KCTC
3773]
Length = 208
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL +S +Y +V IAA N NI DV+L+F GQ L
Sbjct: 44 GDTLNKLSSEYNTTVEDIAAKN-NITDVNLIFVGQHL 79
>gi|258515103|ref|YP_003191325.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778808|gb|ACV62702.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
Length = 208
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
G+ LT I+ ++GVS+ +I N I D L+ G ++NIP S
Sbjct: 167 GDNLTKIAAKFGVSLAAIKGANSQIKDFSLIHIGDKINIPLS 208
>gi|339450946|ref|ZP_08654316.1| hypothetical protein LlacK3_07206 [Leuconostoc lactis KCTC 3528]
Length = 208
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL +S +Y +V IAA N NI DV+L+F GQ L
Sbjct: 44 GDTLNKLSSEYNTTVEDIAAKN-NITDVNLIFVGQHL 79
>gi|317126538|ref|YP_004100650.1| peptidoglycan-binding lysin domain [Intrasporangium calvum DSM
43043]
gi|315590626|gb|ADU49923.1| Peptidoglycan-binding lysin domain [Intrasporangium calvum DSM
43043]
Length = 162
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIP 46
+G+TL+ I ++YGVS IA +N +I + DL+F GQ IP
Sbjct: 121 KGDTLSEIGERYGVSWREIARIN-HIKNPDLIFPGQTFIIP 160
>gi|225175955|ref|ZP_03729947.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
gi|225168543|gb|EEG77345.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
Length = 259
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNV 60
GETL IS+QYG +V ++A N +I + + + GQRL+IP + + TV V
Sbjct: 31 GETLWLISQQYGTTVAALAEAN-HIANANYIEAGQRLDIPGQSQPVGRQTVHTV 83
>gi|398791898|ref|ZP_10552599.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. YR343]
gi|398214626|gb|EJN01202.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. YR343]
Length = 553
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+
Sbjct: 455 RGETLSGIAAKYGVSMATLREMNS--LKRDVVWVGQRLKVPA 494
>gi|293376495|ref|ZP_06622724.1| spoIVD-associated factor A family protein [Turicibacter sanguinis
PC909]
gi|325842019|ref|ZP_08167556.1| putative spoIVD-associated factor A [Turicibacter sp. HGF1]
gi|292644917|gb|EFF62998.1| spoIVD-associated factor A family protein [Turicibacter sanguinis
PC909]
gi|325489741|gb|EGC92097.1| putative spoIVD-associated factor A [Turicibacter sp. HGF1]
Length = 311
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
R +T SI+++Y VSV + +N +I + + G ++ +PS VR++ +N+
Sbjct: 8 RNDTFDSIAEKYNVSVQDLIGMNTHINHLTPLVPGLKVKVPSPVRKDEPNVAQNI----- 62
Query: 66 LKEIHRRSLNVFYGRLDKRHISMQ 89
+Y LDK I++Q
Sbjct: 63 ---------QKYYPNLDKESINLQ 77
>gi|423521717|ref|ZP_17498190.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA4-10]
gi|401176965|gb|EJQ84158.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA4-10]
Length = 257
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TL I+K+YGV ++ N + + DL+ G ++ +PSS
Sbjct: 8 KGDTLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPSS 50
>gi|329297960|ref|ZP_08255296.1| cell wall hydrolase/autolysin [Plautia stali symbiont]
Length = 551
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
RGETL+ I+ +YGVS+ ++ +N + D+V+ GQRL +P+
Sbjct: 454 RGETLSGIAARYGVSMATLRELNN--LKRDVVWVGQRLKVPA 493
>gi|423452276|ref|ZP_17429129.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG5X1-1]
gi|401141656|gb|EJQ49210.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG5X1-1]
Length = 252
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+GETL I+K+YGV ++ N + + DL+ G ++ +PS+
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPSN 50
>gi|301300860|ref|ZP_07207034.1| LysM domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851538|gb|EFK79248.1| LysM domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 203
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
G+TL+ I+ +YGV+VY++A N I +++ ++ GQRL I
Sbjct: 166 GDTLSGIAYRYGVNVYTLAR-NNGISNINWIYPGQRLTI 203
>gi|423591581|ref|ZP_17567612.1| spore coat assembly protein exsA, partial [Bacillus cereus VD048]
gi|401232949|gb|EJR39447.1| spore coat assembly protein exsA, partial [Bacillus cereus VD048]
Length = 259
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|423470642|ref|ZP_17447386.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG6O-2]
gi|402435157|gb|EJV67192.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG6O-2]
Length = 298
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+GETL I+K+YGV ++ N + + DL+ G ++ +PS+
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPSN 50
>gi|147676430|ref|YP_001210645.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI]
gi|146272527|dbj|BAF58276.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI]
Length = 185
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
GE+L I+++YG S+ SI A N N+ + DL++ GQ + IPS
Sbjct: 146 GESLWEIARRYGKSLESIIAAN-NMANPDLIYPGQTIIIPS 185
>gi|423612631|ref|ZP_17588492.1| spore coat assembly protein exsA, partial [Bacillus cereus VD107]
gi|401244619|gb|EJR50978.1| spore coat assembly protein exsA, partial [Bacillus cereus VD107]
Length = 265
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TL I+K+YGV ++ N + + DL+ G ++ +PSS
Sbjct: 8 KGDTLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPSS 50
>gi|423670007|ref|ZP_17645036.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM034]
gi|401297664|gb|EJS03271.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM034]
Length = 266
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|366053378|ref|ZP_09451100.1| hypothetical protein LsueK3_07646 [Lactobacillus suebicus KCTC
3549]
Length = 446
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNI----VDVDLVFEGQRLNIPSS 48
G+T+ +S++YGV+V + N+N+ VDL++ GQ LN+P +
Sbjct: 47 NGDTIWGLSQKYGVTVNDLETSNQNVKKISSTVDLIYAGQTLNLPGT 93
>gi|423598263|ref|ZP_17574263.1| spore coat assembly protein exsA, partial [Bacillus cereus VD078]
gi|401237724|gb|EJR44175.1| spore coat assembly protein exsA, partial [Bacillus cereus VD078]
Length = 264
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|357039931|ref|ZP_09101722.1| NLP/P60 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357294|gb|EHG05070.1| NLP/P60 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 210
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFDL 66
G+TL IS+QYGVSV I N V L+F GQ+L I SS A V S ++
Sbjct: 37 GDTLWRISRQYGVSVEQIQ--KSNAVYTTLIFPGQKLLISSSTPVSQTAEVSRGTSRTEI 94
Query: 67 KEIHRRSLNVFYGRLDKRHISMQITHRLPHIWRNRLPS-FDLKETLQHSLN 116
+ +S +P+++ + P+ FD +++ N
Sbjct: 95 LLDYAKSFT-----------------GVPYVYGGQTPAGFDCSGYVKYVFN 128
>gi|422349975|ref|ZP_16430863.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657824|gb|EKB30706.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 716
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR-EELQATVKNVISSFD 65
GETL SIS++YGVS + A N+ + + + GQRL IP+ EE V V
Sbjct: 491 GETLGSISRRYGVSTAILRATNR--ISGNTIRAGQRLRIPTVASVEESDVRVHTVRKGDT 548
Query: 66 LKEI 69
L EI
Sbjct: 549 LSEI 552
>gi|423512539|ref|ZP_17489070.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA2-1]
gi|402448461|gb|EJV80303.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA2-1]
Length = 273
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|339497611|ref|ZP_08658587.1| hypothetical protein LpseK3_15821 [Leuconostoc
pseudomesenteroides KCTC 3652]
Length = 199
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL +S +YGVSV +I A N NI +V+L+ GQ L
Sbjct: 41 GDTLNKLSAKYGVSVDTI-ATNNNISNVNLIIVGQHL 76
>gi|295398640|ref|ZP_06808665.1| endopeptidase LytF [Aerococcus viridans ATCC 11563]
gi|294973128|gb|EFG48930.1| endopeptidase LytF [Aerococcus viridans ATCC 11563]
Length = 518
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-------SVREELQA---- 55
G+TLT+IS+++ +S+ + VN I + DL+F G LNIP+ S + A
Sbjct: 38 GDTLTAISRKFDLSIADLLEVNT-IDNQDLIFAGHTLNIPTVDAPVVASTKRVADATNVY 96
Query: 56 ------TVKNVISSFDLKEIHRRSLNVFYGRL 81
T+ + + FD + R LN G L
Sbjct: 97 TVVAGDTLNKIAADFDTTAQNLRDLNGISGDL 128
>gi|423519127|ref|ZP_17495608.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA2-4]
gi|401159484|gb|EJQ66867.1| spore coat assembly protein exsA, partial [Bacillus cereus
HuA2-4]
Length = 282
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|229191889|ref|ZP_04318859.1| Cell wall hydrolase [Bacillus cereus ATCC 10876]
gi|228591440|gb|EEK49289.1| Cell wall hydrolase [Bacillus cereus ATCC 10876]
Length = 265
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|229180040|ref|ZP_04307384.1| Cell wall hydrolase [Bacillus cereus 172560W]
gi|423412432|ref|ZP_17389552.1| hypothetical protein IE1_01736 [Bacillus cereus BAG3O-2]
gi|423431783|ref|ZP_17408787.1| hypothetical protein IE7_03599 [Bacillus cereus BAG4O-1]
gi|228603249|gb|EEK60726.1| Cell wall hydrolase [Bacillus cereus 172560W]
gi|401104500|gb|EJQ12477.1| hypothetical protein IE1_01736 [Bacillus cereus BAG3O-2]
gi|401116539|gb|EJQ24377.1| hypothetical protein IE7_03599 [Bacillus cereus BAG4O-1]
Length = 265
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|218231723|ref|YP_002368566.1| cell wall hydrolase [Bacillus cereus B4264]
gi|218159680|gb|ACK59672.1| putative cell wall hydrolase [Bacillus cereus B4264]
Length = 265
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|228954040|ref|ZP_04116069.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|423425901|ref|ZP_17402932.1| hypothetical protein IE5_03590 [Bacillus cereus BAG3X2-2]
gi|423503558|ref|ZP_17480150.1| hypothetical protein IG1_01124 [Bacillus cereus HD73]
gi|449090707|ref|YP_007423148.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228805606|gb|EEM52196.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|401110648|gb|EJQ18547.1| hypothetical protein IE5_03590 [Bacillus cereus BAG3X2-2]
gi|402458912|gb|EJV90652.1| hypothetical protein IG1_01124 [Bacillus cereus HD73]
gi|449024464|gb|AGE79627.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 265
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|228922477|ref|ZP_04085779.1| Cell wall hydrolase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423581973|ref|ZP_17558084.1| hypothetical protein IIA_03488 [Bacillus cereus VD014]
gi|423635466|ref|ZP_17611119.1| hypothetical protein IK7_01875 [Bacillus cereus VD156]
gi|228837191|gb|EEM82530.1| Cell wall hydrolase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401212852|gb|EJR19593.1| hypothetical protein IIA_03488 [Bacillus cereus VD014]
gi|401278217|gb|EJR84153.1| hypothetical protein IK7_01875 [Bacillus cereus VD156]
Length = 265
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|269836237|ref|YP_003318465.1| peptidase M23 [Sphaerobacter thermophilus DSM 20745]
gi|269785500|gb|ACZ37643.1| Peptidase M23 [Sphaerobacter thermophilus DSM 20745]
Length = 363
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVRE 51
G+TL I+++YGV ++ + A N + + DL++ GQ +NIP E
Sbjct: 86 GDTLFKIAQRYGVPLHEVIAAN-DFPNPDLIYPGQHVNIPGEDAE 129
>gi|229071259|ref|ZP_04204483.1| Cell wall hydrolase [Bacillus cereus F65185]
gi|229081016|ref|ZP_04213529.1| Cell wall hydrolase [Bacillus cereus Rock4-2]
gi|423437218|ref|ZP_17414199.1| hypothetical protein IE9_03399 [Bacillus cereus BAG4X12-1]
gi|228702330|gb|EEL54803.1| Cell wall hydrolase [Bacillus cereus Rock4-2]
gi|228711880|gb|EEL63831.1| Cell wall hydrolase [Bacillus cereus F65185]
gi|401120373|gb|EJQ28169.1| hypothetical protein IE9_03399 [Bacillus cereus BAG4X12-1]
Length = 265
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLHIPGSVK 78
>gi|366163253|ref|ZP_09463008.1| peptidoglycan-binding LysM [Acetivibrio cellulolyticus CD2]
Length = 503
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
G++L IS+++GVSV I N+ + +L++ GQRLNIP + + TVK
Sbjct: 8 GDSLYLISQKFGVSVEQIKQANQ--LSSNLIYIGQRLNIPVERQRPIIYTVK 57
>gi|423495328|ref|ZP_17471972.1| spore coat assembly protein exsA, partial [Bacillus cereus
CER057]
gi|401150600|gb|EJQ58056.1| spore coat assembly protein exsA, partial [Bacillus cereus
CER057]
Length = 279
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|228909587|ref|ZP_04073410.1| Cell wall hydrolase [Bacillus thuringiensis IBL 200]
gi|228849876|gb|EEM94707.1| Cell wall hydrolase [Bacillus thuringiensis IBL 200]
Length = 265
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQAFIGEQLHIPGSVK 78
>gi|89096158|ref|ZP_01169051.1| LytE [Bacillus sp. NRRL B-14911]
gi|89089012|gb|EAR68120.1| LytE [Bacillus sp. NRRL B-14911]
Length = 258
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
+G+TL SI++QYG +V + +NK + DL++ G RL +P +
Sbjct: 35 KGDTLYSIARQYGSTVGQLKHLNK--LKGDLIYAGSRLEVPGKI 76
>gi|423660734|ref|ZP_17635903.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM022]
gi|401301945|gb|EJS07531.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM022]
Length = 274
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|423401417|ref|ZP_17378590.1| hypothetical protein ICW_01815 [Bacillus cereus BAG2X1-2]
gi|423477878|ref|ZP_17454593.1| hypothetical protein IEO_03336 [Bacillus cereus BAG6X1-1]
gi|401654407|gb|EJS71950.1| hypothetical protein ICW_01815 [Bacillus cereus BAG2X1-2]
gi|402428803|gb|EJV60895.1| hypothetical protein IEO_03336 [Bacillus cereus BAG6X1-1]
Length = 267
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+ +TL ISKQYGVS+ SI N D F G++LNIP S
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDQTFIGEQLNIPGS 76
>gi|402299472|ref|ZP_10819075.1| spore cortex-lytic protein [Bacillus alcalophilus ATCC 27647]
gi|401725359|gb|EJS98649.1| spore cortex-lytic protein [Bacillus alcalophilus ATCC 27647]
Length = 195
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
GE+L I +QYGVSV ++ N+ D++F G+ L IPSS+
Sbjct: 33 GESLYLIGQQYGVSVQALREANEKT--GDMIFTGETLAIPSSI 73
>gi|402564096|ref|YP_006606820.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus
thuringiensis HD-771]
gi|401792748|gb|AFQ18787.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus
thuringiensis HD-771]
Length = 559
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
>gi|423641154|ref|ZP_17616772.1| hypothetical protein IK9_01099 [Bacillus cereus VD166]
gi|423649628|ref|ZP_17625198.1| hypothetical protein IKA_03415 [Bacillus cereus VD169]
gi|401280215|gb|EJR86137.1| hypothetical protein IK9_01099 [Bacillus cereus VD166]
gi|401282908|gb|EJR88805.1| hypothetical protein IKA_03415 [Bacillus cereus VD169]
Length = 265
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|423673789|ref|ZP_17648728.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM062]
gi|401310396|gb|EJS15716.1| spore coat assembly protein exsA, partial [Bacillus cereus
VDM062]
Length = 285
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|333447975|ref|ZP_08482917.1| peptidoglycan-binding protein [Leuconostoc inhae KCTC 3774]
Length = 171
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL ISK++ V+V IAA N NI ++D++ GQ L
Sbjct: 10 GDTLNKISKEFNVAVAQIAA-NNNISNIDVILVGQHL 45
>gi|228959970|ref|ZP_04121635.1| Cell wall hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229047446|ref|ZP_04193038.1| Cell wall hydrolase [Bacillus cereus AH676]
gi|229111236|ref|ZP_04240790.1| Cell wall hydrolase [Bacillus cereus Rock1-15]
gi|229146335|ref|ZP_04274706.1| Cell wall hydrolase [Bacillus cereus BDRD-ST24]
gi|423585826|ref|ZP_17561913.1| hypothetical protein IIE_01238 [Bacillus cereus VD045]
gi|423628844|ref|ZP_17604593.1| hypothetical protein IK5_01696 [Bacillus cereus VD154]
gi|423656624|ref|ZP_17631923.1| hypothetical protein IKG_03612 [Bacillus cereus VD200]
gi|228636968|gb|EEK93427.1| Cell wall hydrolase [Bacillus cereus BDRD-ST24]
gi|228672230|gb|EEL27520.1| Cell wall hydrolase [Bacillus cereus Rock1-15]
gi|228723890|gb|EEL75243.1| Cell wall hydrolase [Bacillus cereus AH676]
gi|228799713|gb|EEM46665.1| Cell wall hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401233172|gb|EJR39668.1| hypothetical protein IIE_01238 [Bacillus cereus VD045]
gi|401268389|gb|EJR74437.1| hypothetical protein IK5_01696 [Bacillus cereus VD154]
gi|401290365|gb|EJR96059.1| hypothetical protein IKG_03612 [Bacillus cereus VD200]
Length = 265
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|218898864|ref|YP_002447275.1| cell wall hydrolase [Bacillus cereus G9842]
gi|228902267|ref|ZP_04066427.1| Cell wall hydrolase [Bacillus thuringiensis IBL 4222]
gi|423359251|ref|ZP_17336754.1| hypothetical protein IC1_01231 [Bacillus cereus VD022]
gi|423561831|ref|ZP_17538107.1| hypothetical protein II5_01235 [Bacillus cereus MSX-A1]
gi|434376821|ref|YP_006611465.1| cell wall hydrolase [Bacillus thuringiensis HD-789]
gi|218544178|gb|ACK96572.1| putative cell wall hydrolase [Bacillus cereus G9842]
gi|228857382|gb|EEN01882.1| Cell wall hydrolase [Bacillus thuringiensis IBL 4222]
gi|401085123|gb|EJP93369.1| hypothetical protein IC1_01231 [Bacillus cereus VD022]
gi|401202088|gb|EJR08953.1| hypothetical protein II5_01235 [Bacillus cereus MSX-A1]
gi|401875378|gb|AFQ27545.1| cell wall hydrolase [Bacillus thuringiensis HD-789]
Length = 265
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|434377593|ref|YP_006612237.1| spore coat assembly protein [Bacillus thuringiensis HD-789]
gi|401876150|gb|AFQ28317.1| spore coat assembly protein [Bacillus thuringiensis HD-789]
Length = 548
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
>gi|296504263|ref|YP_003665963.1| cell wall hydrolase CwlJ [Bacillus thuringiensis BMB171]
gi|296325315|gb|ADH08243.1| cell wall hydrolase cwlJ [Bacillus thuringiensis BMB171]
Length = 265
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|228966690|ref|ZP_04127735.1| Cell wall hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402558936|ref|YP_006601660.1| cell wall hydrolase [Bacillus thuringiensis HD-771]
gi|228792990|gb|EEM40547.1| Cell wall hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401787588|gb|AFQ13627.1| cell wall hydrolase [Bacillus thuringiensis HD-771]
Length = 265
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|300174056|ref|YP_003773222.1| peptidoglycan-binding protein [Leuconostoc gasicomitatum LMG
18811]
gi|299888435|emb|CBL92403.1| Peptidoglycan binding protein, LysM domain [Leuconostoc
gasicomitatum LMG 18811]
Length = 206
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL ISK++ V+V IAA N NI ++D++ GQ L
Sbjct: 45 GDTLNKISKEFNVAVAQIAA-NNNISNIDVILVGQHL 80
>gi|257870045|ref|ZP_05649698.1| predicted protein [Enterococcus gallinarum EG2]
gi|257804209|gb|EEV33031.1| predicted protein [Enterococcus gallinarum EG2]
Length = 233
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQA 55
G+TL+ ++ +YG +V + A+N++I D +L+F+G+ L I S + +A
Sbjct: 62 GDTLSGLATEYGTTVDDLLALNESIQDPNLIFDGETLLIFSDAQPMTRA 110
>gi|423489605|ref|ZP_17466287.1| spore coat assembly protein exsA, partial [Bacillus cereus
BtB2-4]
gi|423497876|ref|ZP_17474493.1| spore coat assembly protein exsA, partial [Bacillus cereus
CER074]
gi|401162356|gb|EJQ69714.1| spore coat assembly protein exsA, partial [Bacillus cereus
CER074]
gi|402431230|gb|EJV63299.1| spore coat assembly protein exsA, partial [Bacillus cereus
BtB2-4]
Length = 287
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|229129040|ref|ZP_04258013.1| Cell wall hydrolase [Bacillus cereus BDRD-Cer4]
gi|6759475|emb|CAB69802.1| putative cell wall hydrolase [Bacillus cereus ATCC 14579]
gi|228654277|gb|EEL10142.1| Cell wall hydrolase [Bacillus cereus BDRD-Cer4]
Length = 265
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|423368473|ref|ZP_17345905.1| spore coat assembly protein exsA, partial [Bacillus cereus VD142]
gi|401080385|gb|EJP88673.1| spore coat assembly protein exsA, partial [Bacillus cereus VD142]
Length = 290
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
+GETL I+K+YGV ++ N + + DL+ G ++ +PS
Sbjct: 8 KGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|228940841|ref|ZP_04103401.1| Cell wall hydrolase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973761|ref|ZP_04134339.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980317|ref|ZP_04140628.1| Cell wall hydrolase [Bacillus thuringiensis Bt407]
gi|229151964|ref|ZP_04280160.1| Cell wall hydrolase [Bacillus cereus m1550]
gi|384187765|ref|YP_005573661.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676084|ref|YP_006928455.1| cell wall hydrolase CwlJ [Bacillus thuringiensis Bt407]
gi|452200145|ref|YP_007480226.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228631519|gb|EEK88152.1| Cell wall hydrolase [Bacillus cereus m1550]
gi|228779422|gb|EEM27678.1| Cell wall hydrolase [Bacillus thuringiensis Bt407]
gi|228786007|gb|EEM34008.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818855|gb|EEM64920.1| Cell wall hydrolase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326941474|gb|AEA17370.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409175213|gb|AFV19518.1| cell wall hydrolase CwlJ [Bacillus thuringiensis Bt407]
gi|452105538|gb|AGG02478.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 265
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|15644434|ref|NP_229486.1| hypothetical protein TM1686 [Thermotoga maritima MSB8]
gi|4982262|gb|AAD36753.1|AE001809_5 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 395
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISS 63
RGETL SI+ QYGV V I +N+ + D D + GQ L I RE V N+ SS
Sbjct: 216 RGETLWSIANQYGVRVGDIVLINR-LEDPDRIVAGQVLKIGRVYFRENPVTIVVNLFSS 273
>gi|423385268|ref|ZP_17362524.1| hypothetical protein ICE_03014 [Bacillus cereus BAG1X1-2]
gi|423528375|ref|ZP_17504820.1| hypothetical protein IGE_01927 [Bacillus cereus HuB1-1]
gi|401635324|gb|EJS53079.1| hypothetical protein ICE_03014 [Bacillus cereus BAG1X1-2]
gi|402452038|gb|EJV83857.1| hypothetical protein IGE_01927 [Bacillus cereus HuB1-1]
Length = 265
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|365159461|ref|ZP_09355641.1| hypothetical protein HMPREF1014_01104 [Bacillus sp.
7_6_55CFAA_CT2]
gi|363625173|gb|EHL76218.1| hypothetical protein HMPREF1014_01104 [Bacillus sp.
7_6_55CFAA_CT2]
Length = 265
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYGVS+ SI N D F G++L+IP SV+
Sbjct: 36 KNDTLWGISKQYGVSIQSIKQANNK--GNDKTFIGEQLHIPGSVK 78
>gi|256422277|ref|YP_003122930.1| hypothetical protein Cpin_3262 [Chitinophaga pinensis DSM 2588]
gi|256037185|gb|ACU60729.1| hypothetical protein Cpin_3262 [Chitinophaga pinensis DSM 2588]
Length = 1067
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 16/83 (19%)
Query: 18 GVSVYSIAA---VNKNIV---DVDLVFEGQRLNIPSSVREELQATVKNVISSFDLKEIHR 71
G + YS+A VN + V D+ VF+ + N+P VR+ LQ+ + N ++S +K+ R
Sbjct: 903 GGTRYSLAVGGNVNGDFVNSNDLAYVFDTKNQNVPEKVRQGLQSILDNPLASESIKDYIR 962
Query: 72 RS----------LNVFYGRLDKR 84
+S +N FYG D R
Sbjct: 963 KSSGKVAERNGGVNAFYGIWDMR 985
>gi|312109769|ref|YP_003988085.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Geobacillus
sp. Y4.1MC1]
gi|311214870|gb|ADP73474.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Geobacillus
sp. Y4.1MC1]
Length = 216
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI 45
+G+TLT+I+K+Y SV ++ +N NI + DL+ GQ+L +
Sbjct: 177 KGDTLTAIAKRYNTSVQNLVKLN-NIKNPDLILVGQKLRV 215
>gi|433460186|ref|ZP_20417821.1| hypothetical protein D479_01300 [Halobacillus sp. BAB-2008]
gi|432191968|gb|ELK48887.1| hypothetical protein D479_01300 [Halobacillus sp. BAB-2008]
Length = 164
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNI-----PSSVREELQATVKN 59
GETLT IS+ Y V + I N N+ + D+++ GQ+L I PS++ + +V N
Sbjct: 8 GETLTQISRDYRVPLTDILRAN-NLSNPDIIYPGQQLQIPGIPDPSTIPYRIDVSVNN 64
>gi|407706954|ref|YP_006830539.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis MC28]
gi|407384639|gb|AFU15140.1| spoVID-dependent spore coat assembly factor; FtsK/SpoIIIE family
protein; surface protein [Bacillus thuringiensis MC28]
Length = 784
Score = 37.0 bits (84), Expect = 8.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS+ V + QA +
Sbjct: 3 KGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPSNGVNVKQQAGAGSAPPKQ 62
Query: 65 DLKEIHRRSL 74
+KE+ ++
Sbjct: 63 YVKEVQQKEF 72
>gi|312623186|ref|YP_004024799.1| spore coat assembly protein safa [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203653|gb|ADQ46980.1| spore coat assembly protein SafA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 203
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS 47
G+TL SI+ + VS+ + A N I + L+F GQ++NIP+
Sbjct: 31 GDTLWSIAVKNQVSISELLAANPQIKNPSLIFPGQKINIPN 71
>gi|403253378|ref|ZP_10919679.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. EMP]
gi|402810912|gb|EJX25400.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. EMP]
Length = 377
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISS 63
RGETL SI+ QYGV V I +N+ + D D + GQ L I RE V N+ SS
Sbjct: 198 RGETLWSIANQYGVRVGDIVLINR-LEDPDRIVAGQVLKIGRVYFRENPVTIVVNLFSS 255
>gi|170288938|ref|YP_001739176.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2]
gi|170176441|gb|ACB09493.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2]
Length = 382
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISS 63
RGETL SI+ QYGV V I +N+ + D D + GQ L I RE V N+ SS
Sbjct: 203 RGETLWSIANQYGVRVGDIVLINR-LEDPDRIVAGQVLKIGRVYFRENPVTIVVNLFSS 260
>gi|148270116|ref|YP_001244576.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
gi|418045744|ref|ZP_12683839.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga maritima MSB8]
gi|147735660|gb|ABQ47000.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
gi|351676629|gb|EHA59782.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga maritima MSB8]
Length = 382
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISS 63
RGETL SI+ QYGV V I +N+ + D D + GQ L I RE V N+ SS
Sbjct: 203 RGETLWSIANQYGVRVGDIVLINR-LEDPDRIVAGQVLKIGRVYFRENPVTIVVNLFSS 260
>gi|399516522|ref|ZP_10758122.1| Aggregation promoting factrelated surface protein [Leuconostoc
pseudomesenteroides 4882]
gi|398648611|emb|CCJ66149.1| Aggregation promoting factrelated surface protein [Leuconostoc
pseudomesenteroides 4882]
Length = 198
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRL 43
G+TL +S +YGVSV +I A N NI +V+L+ GQ L
Sbjct: 41 GDTLNKLSAKYGVSVDTI-ATNNNISNVNLIVVGQHL 76
>gi|365156861|ref|ZP_09353152.1| hypothetical protein HMPREF1015_02053 [Bacillus smithii 7_3_47FAA]
gi|363626661|gb|EHL77642.1| hypothetical protein HMPREF1015_02053 [Bacillus smithii 7_3_47FAA]
Length = 314
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKN 59
+G+TL+ I+K YG+SV ++ ++N+ ++ DL+F G R+ + S + +Q +V+N
Sbjct: 79 KGDTLSKIAKAYGMSVQTLKSINQ--LNSDLIFPGDRIVLNGS--KAVQQSVEN 128
>gi|319942613|ref|ZP_08016921.1| membrane-bound lytic murein transglycosylase D [Sutterella
wadsworthensis 3_1_45B]
gi|319803792|gb|EFW00724.1| membrane-bound lytic murein transglycosylase D [Sutterella
wadsworthensis 3_1_45B]
Length = 703
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
RG++L SI+++YGVS S+ N+ + + + GQRL IP S
Sbjct: 489 RGDSLASIAQRYGVSTASLKTTNR--LSSNTIRAGQRLRIPKS 529
>gi|281412542|ref|YP_003346621.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10]
gi|281373645|gb|ADA67207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10]
Length = 382
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS-VREELQATVKNVISS 63
RGETL SI+ QYGV V I +N+ + D D + GQ L I RE V N+ SS
Sbjct: 203 RGETLWSIANQYGVRVGDIVLINR-LEDPDRIVAGQVLKIGRVYFRENPVTIVVNLFSS 260
>gi|212639770|ref|YP_002316290.1| cell wall-associated hydrolase containing N-terminal Lys repeats
[Anoxybacillus flavithermus WK1]
gi|212561250|gb|ACJ34305.1| Cell wall-associated hydrolase containing N-terminal Lys repeats
[Anoxybacillus flavithermus WK1]
Length = 357
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKN 59
G++L++I+K + +V + A+N +I +V+ + GQ +N+P S E A ++
Sbjct: 191 GDSLSAIAKTFQTTVNDLLALNPSITNVNFIRVGQTINVPLSWEERANAIIET 243
>gi|83590930|ref|YP_430939.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
gi|83573844|gb|ABC20396.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
Length = 217
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSS 48
+G+TL ++S++YGV+V I A N +D L++ GQ L IP++
Sbjct: 34 KGDTLWALSRRYGVTVEQIKAANN--LDSSLIYIGQILEIPTN 74
>gi|225874204|ref|YP_002755663.1| transglycosylase [Acidobacterium capsulatum ATCC 51196]
gi|225794042|gb|ACO34132.1| transglycosylase, SLT family [Acidobacterium capsulatum ATCC 51196]
Length = 694
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVISSFD 65
RG+TL SI+ +YGVSV S+ N + + GQ L++ + VR E+ +N +
Sbjct: 512 RGDTLVSIADRYGVSVLSLRRWNH--LRSSFLRAGQLLHVSTPVRAEM----RNTTYARG 565
Query: 66 LKEIHRRSLNVFYGRL-DKRHISMQITHRLPHIWRNRLPS 104
E HR G + D H+S++ R H+ N + +
Sbjct: 566 GTEYHRIGRGETLGGIADHYHVSIEDLRRWNHLHGNEIAA 605
>gi|229174426|ref|ZP_04301958.1| Cell wall hydrolase [Bacillus cereus MM3]
gi|228608986|gb|EEK66276.1| Cell wall hydrolase [Bacillus cereus MM3]
Length = 267
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
+ +TL ISKQYG+S+ SI N D F G++LNIP S
Sbjct: 36 KNDTLWGISKQYGISIQSIKQANNK--GNDQTFIGEQLNIPGSTN 78
>gi|218899595|ref|YP_002448006.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus cereus
G9842]
gi|218541256|gb|ACK93650.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus cereus
G9842]
Length = 631
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
>gi|389843142|ref|YP_006345222.1| membrane-bound metallopeptidase [Mesotoga prima MesG1.Ag.4.2]
gi|387857888|gb|AFK05979.1| membrane-bound metallopeptidase [Mesotoga prima MesG1.Ag.4.2]
Length = 605
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSV 49
G+ L SI++ YGV+V + A+N I + DL++ G + IP S+
Sbjct: 323 GDNLWSIAQAYGVTVEQLKAMNPEIKNWDLIYRGDEIKIPLSL 365
>gi|229129706|ref|ZP_04258674.1| Spore coat assembly protein exsA [Bacillus cereus BDRD-Cer4]
gi|228653823|gb|EEL09693.1| Spore coat assembly protein exsA [Bacillus cereus BDRD-Cer4]
Length = 575
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 3 KGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 62
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 63 YVKEVQQK 70
>gi|30022501|ref|NP_834132.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus cereus
ATCC 14579]
gi|29898059|gb|AAP11333.1| SpoVID-dependent spore coat assembly factor SafA [Bacillus cereus
ATCC 14579]
Length = 580
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
>gi|386713419|ref|YP_006179742.1| hypothetical protein HBHAL_2110 [Halobacillus halophilus DSM
2266]
gi|384072975|emb|CCG44466.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 207
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKNVI 61
G+TL ISK+Y + + I N + DL++ G R+ IP ++ ++++T + VI
Sbjct: 36 GDTLWKISKRYQIGLSEIINANSQFNNPDLIYPGDRVTIP--LKRQVKSTEQQVI 88
>gi|423358537|ref|ZP_17336040.1| spore coat assembly protein exsA [Bacillus cereus VD022]
gi|401084409|gb|EJP92655.1| spore coat assembly protein exsA [Bacillus cereus VD022]
Length = 643
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
>gi|433446304|ref|ZP_20410363.1| cell wall-associated hydrolase with LysM repeats, NlpC/P60 family
[Anoxybacillus flavithermus TNO-09.006]
gi|432000600|gb|ELK21494.1| cell wall-associated hydrolase with LysM repeats, NlpC/P60 family
[Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVK 58
G+ L++I++++ V++ + A+N I +V+ + GQ +N+P S E A ++
Sbjct: 110 GDILSTIARKFNVTLDDLLALNPTITNVNFIRVGQTINVPLSWEERANAIIE 161
>gi|385810330|ref|YP_005846726.1| membrane-bound lytic murein transglycosylase D [Ignavibacterium
album JCM 16511]
gi|383802378|gb|AFH49458.1| Membrane-bound lytic murein transglycosylase D [Ignavibacterium
album JCM 16511]
Length = 920
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVREELQATVKN 59
+GET+T I+ +YGVS Y +A N NI ++ G +L IP V + +N
Sbjct: 421 KGETITKIANRYGVSKYDLADAN-NITTKTKLYAGLKLKIPVMVTNQQNDYTEN 473
>gi|357050292|ref|ZP_09111496.1| hypothetical protein HMPREF9478_01479 [Enterococcus
saccharolyticus 30_1]
gi|355381779|gb|EHG28895.1| hypothetical protein HMPREF9478_01479 [Enterococcus
saccharolyticus 30_1]
Length = 204
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 7 GETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPSSVR 50
G+TL+ ++ +YG +V + A+N++I D +L+F+G+ L I S +
Sbjct: 33 GDTLSGLATEYGTTVDDLLALNESIQDPNLIFDGETLLIFSDAQ 76
>gi|218233676|ref|YP_002369235.1| spore coat assembly protein SafA [Bacillus cereus B4264]
gi|218161633|gb|ACK61625.1| spore coat assembly protein SafA [Bacillus cereus B4264]
Length = 604
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 6 RGETLTSISKQYGVSVYSIAAVNKNIVDVDLVFEGQRLNIPS-SVREELQATVKNVISSF 64
+G+TL I+K+YGV ++ N + + DL+ G ++ +PS SV + QA +
Sbjct: 8 KGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPSKSVHMKQQAGAGSAPPKQ 67
Query: 65 DLKEIHRR 72
+KE+ ++
Sbjct: 68 YVKEVQQK 75
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,375,506,065
Number of Sequences: 23463169
Number of extensions: 183159175
Number of successful extensions: 443972
Number of sequences better than 100.0: 392
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 443563
Number of HSP's gapped (non-prelim): 591
length of query: 261
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 122
effective length of database: 9,097,814,876
effective search space: 1109933414872
effective search space used: 1109933414872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)