Query 024857
Match_columns 261
No_of_seqs 199 out of 1131
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 15:37:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cir_A Hexose-6-phosphate muta 100.0 6.8E-47 2.3E-51 333.8 21.5 233 2-245 45-291 (297)
2 2hta_A Putative enzyme related 100.0 6.2E-46 2.1E-50 329.4 22.8 228 2-243 77-307 (309)
3 1jov_A HI1317; hypothetical pr 100.0 4.4E-45 1.5E-49 318.1 20.7 211 2-241 58-269 (270)
4 3k25_A SLR1438 protein; struct 100.0 5.2E-44 1.8E-48 314.2 23.4 213 6-244 53-288 (289)
5 3q1n_A Galactose mutarotase re 100.0 5.9E-37 2E-41 269.9 24.3 208 12-243 42-294 (294)
6 3dcd_A Galactose mutarotase re 100.0 1.3E-36 4.3E-41 269.2 24.4 207 12-245 42-294 (307)
7 3mwx_A Aldose 1-epimerase; str 100.0 9.3E-37 3.2E-41 272.3 16.7 217 5-245 56-324 (326)
8 3os7_A Galactose mutarotase-li 100.0 7.7E-37 2.6E-41 274.4 16.1 217 5-244 63-340 (341)
9 3nre_A Aldose 1-epimerase; str 100.0 6.8E-36 2.3E-40 262.7 20.9 206 10-244 42-290 (291)
10 1yga_A Hypothetical 37.9 kDa p 100.0 1.1E-33 3.8E-38 254.0 18.2 224 2-243 47-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 1.4E-33 4.9E-38 253.4 15.2 221 3-243 63-342 (344)
12 1lur_A Aldose 1-epimerase; vit 100.0 2.7E-31 9.2E-36 238.1 15.3 220 5-244 57-337 (339)
13 1nsx_A Galactose mutarotase; e 100.0 9E-30 3.1E-34 228.8 16.4 222 4-245 51-339 (347)
14 3imh_A Galactose-1-epimerase; 100.0 3.3E-28 1.1E-32 217.2 19.8 223 3-245 56-332 (338)
15 1z45_A GAL10 bifunctional prot 100.0 4E-28 1.4E-32 236.1 18.3 224 3-243 411-699 (699)
16 3ty1_A Hypothetical aldose 1-e 99.8 1.3E-18 4.4E-23 157.9 16.4 196 29-245 133-354 (384)
17 4ep8_B Urease subunit beta; al 75.1 2.4 8.4E-05 30.1 3.2 40 83-128 13-52 (101)
18 4ubp_B Protein (urease (chain 67.3 3.7 0.00012 30.4 2.7 41 82-128 18-58 (126)
19 4ac7_B Urease subunit beta; hy 67.3 3.7 0.00012 30.4 2.7 41 82-128 18-58 (126)
20 3isy_A Bsupi, intracellular pr 64.5 18 0.00062 26.5 6.1 32 76-110 6-37 (120)
21 3qga_A UREA2, fusion of urease 42.9 11 0.00038 30.6 2.0 51 72-128 105-157 (225)
22 3bs6_A Inner membrane protein 41.0 86 0.0029 26.0 7.5 45 56-110 91-136 (280)
23 2wnx_A Glycoside hydrolase, fa 40.2 70 0.0024 24.8 6.2 44 79-124 13-61 (170)
24 2xbt_A Cellulosomal scaffoldin 38.1 57 0.002 25.0 5.4 35 89-125 24-59 (160)
25 1e9y_A Urease subunit alpha; h 37.8 13 0.00044 30.5 1.6 51 72-128 106-157 (238)
26 1yew_A Particulate methane mon 36.3 42 0.0014 29.5 4.7 28 80-110 256-283 (382)
27 4fnq_A Alpha-galactosidase AGA 33.9 2E+02 0.0067 27.6 9.6 58 55-121 129-187 (729)
28 3rfr_A PMOB; membrane, oxidore 32.6 43 0.0015 29.8 4.2 28 80-110 290-317 (419)
29 2kl8_A OR15; structural genomi 32.5 46 0.0016 21.5 3.3 18 77-95 29-46 (85)
30 3blc_A Inner membrane protein 32.1 1.6E+02 0.0055 25.0 7.9 22 224-245 267-288 (330)
31 3zqx_A Cellulose 1,4-beta-cell 31.3 1.1E+02 0.0037 23.1 5.9 48 79-128 3-55 (146)
32 2ab9_A Pro-SFTI-1; protein, be 31.2 7.5 0.00026 20.5 -0.5 7 15-21 21-27 (31)
33 2yfo_A Alpha-galactosidase-suc 29.3 3.5E+02 0.012 25.9 10.4 96 15-120 72-186 (720)
34 3mi6_A Alpha-galactosidase; NE 25.6 3.5E+02 0.012 26.0 9.6 48 55-111 130-178 (745)
35 2f49_C STE5 peptide, mitogen-a 25.3 41 0.0014 17.9 1.7 22 4-25 6-28 (30)
36 4gy7_A Urease; JACK bean, hydr 24.8 50 0.0017 32.4 3.6 32 82-118 143-174 (840)
37 1k1x_A 4-alpha-glucanotransfer 23.3 1.3E+02 0.0044 28.6 6.0 37 74-113 540-576 (659)
38 1g43_A Scaffolding protein; be 22.5 1.5E+02 0.0053 22.5 5.4 32 89-122 20-52 (160)
39 3zuc_A Cellulosomal scaffoldin 22.4 1.3E+02 0.0045 22.8 4.9 37 89-127 20-57 (153)
No 1
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=6.8e-47 Score=333.81 Aligned_cols=233 Identities=30% Similarity=0.551 Sum_probs=195.0
Q ss_pred CccccCCC-CCCCCcceEEcccccCCC------CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecC---Chhhhc
Q 024857 2 GKNCFFLV-ARPLLRIQSQFVEFANHG------SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKH---SEEEVK 71 (261)
Q Consensus 2 ~~~~~~~~-~~~rgG~PvlFP~fg~~~------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~---~~~~~~ 71 (261)
++.++|.. .++|||+|+||||||+.. ++++|||+|++.|++++.. +++..+++|+|.+ ++++++
T Consensus 45 ~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HGfar~~~W~v~~~~------~~~~~~v~l~l~s~~~~~~~~~ 118 (297)
T 2cir_A 45 STAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFLGQT------KENPPTVQFGLKPEIANPELTK 118 (297)
T ss_dssp CTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTBSGGGSBCEEEEEE------EETTEEEEEEECGGGSCHHHHH
T ss_pred CcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCccccCCCceEEEeec------cCCceEEEEEecCCCCCHHHHh
Confidence 35566665 668999999999999985 6899999999999998651 1123679999998 788899
Q ss_pred cCCcceEEEEEEEEcCCCeEEEEEEEEecCCC-CeeEEEeeeeceeeecCCcceeEEecCCCCceeeCCCCcceeeeeCC
Q 024857 72 IWPHRYEFRLRITLGPGGDLMLTSRIRNTNTD-GKSFAFTFAYHTYFAVSDISEVRVEGLETLDYLDNLKDKERFTEQGD 150 (261)
Q Consensus 72 ~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~-~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~d~l~~~~~~~~~~~ 150 (261)
+|||+|+++++|+|++ ++|+|+|+++|+ + +++|||++|+||||+++++.++.+.|+.+..++|.... .......+
T Consensus 119 g~P~~~~~~vty~L~~-~~L~i~~~~~N~--~~d~~~~~~~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~ 194 (297)
T 2cir_A 119 LWPMDYLLILTVELGS-DYLKTAIEVENT--SSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHP 194 (297)
T ss_dssp HSCCCCEEEEEEEECS-SEEEEEEEEECC--CSSCCEEEEEEECCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSS
T ss_pred hCCCcEEEEEEEEEcC-CEEEEEEEEEcC--CCCcceEEeeecCceEeCCCccceEEecCCCCccEeccCC-ccccccCC
Confidence 9999999999999998 899999999999 9 99999999999999999887888888876568886532 23232345
Q ss_pred eeeecCCCCeEEeCCC--CeEEEEeCCCCcEEEEEECCCCcEEEeCCcccccccccCC-CCCCccceEEeccCccCCCEE
Q 024857 151 AITFESEVDKVYLSTP--TKIAILDHERKRTFVLRKDGLPDAVVWNPWDKKAKAMADF-GDDEYKHMLCVEAACVEKPII 227 (261)
Q Consensus 151 ~~~l~~~~D~vy~~~~--~~~~l~d~~~~~~i~i~~~~~~~~vvw~p~~~~~~~~~d~-~~~~~~~~vCvEp~~~~~~~~ 227 (261)
.+.+..++|++|.... ..++|.++ +++.|+|.++++|++|||||+.++++.|.|+ ++++|++|||||||+..+.++
T Consensus 195 ~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~ 273 (297)
T 2cir_A 195 VVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFIS 273 (297)
T ss_dssp SBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCCEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEE
T ss_pred ccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEEEECcchhhccccccCCCccccccEEEECceECCCCEE
Confidence 6777788999997654 57899999 9999999998899999999976556677777 677889999999999777799
Q ss_pred eCCCCEEEEEEEEEEeec
Q 024857 228 LKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 228 L~PGe~~~~~~~i~~~~~ 245 (261)
|+|||+++.+++|++...
T Consensus 274 L~pGe~~~~~~~~~~~~~ 291 (297)
T 2cir_A 274 LAPGKKWNAYQLLCKEEL 291 (297)
T ss_dssp ECTTCEEEEEEEEECC--
T ss_pred ECCCCeEEEEEEEEEEec
Confidence 999999999999999643
No 2
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=6.2e-46 Score=329.42 Aligned_cols=228 Identities=27% Similarity=0.403 Sum_probs=194.9
Q ss_pred CccccCCC-CCCCCcceEEcccccCCC--CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccCCcceE
Q 024857 2 GKNCFFLV-ARPLLRIQSQFVEFANHG--SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIWPHRYE 78 (261)
Q Consensus 2 ~~~~~~~~-~~~rgG~PvlFP~fg~~~--~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~ 78 (261)
++.++|.. .++|||+|+||||+||.. .+++|||||++.|++++.. .+++..+|+|+|.++++++++|||+|+
T Consensus 77 ~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~~HGfar~~~W~v~~~~-----~~~~~~~v~l~l~s~~~~~~gyP~~~~ 151 (309)
T 2hta_A 77 SNNTPFKTGVALRGGVPICWPWFGPAAQQGLPSHGFARNLPWALKAHN-----EDDNGVMLTFELQSSEATRKYWPHDFT 151 (309)
T ss_dssp CTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCCTTBSGGGSBCEEEEEE-----ECSSCEEEEEEEECCHHHHHHSCCCCE
T ss_pred CchHhccCCCCeeccceEEEecCCCCCCCCCCCccCcCCCceEEEeEe-----cCCCceEEEEEeCCChHHhhcCCCceE
Confidence 34566765 568999999999999986 5799999999999998652 112236899999988788899999999
Q ss_pred EEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEecCCCCceeeCCCCcceeeeeCCeeeecCCC
Q 024857 79 FRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVEGLETLDYLDNLKDKERFTEQGDAITFESEV 158 (261)
Q Consensus 79 l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~d~l~~~~~~~~~~~~~~l~~~~ 158 (261)
++++|+| + ++|+|+++++| +|||++|+||||++++..++++.++ +..|++.+++++.....+..++|..++
T Consensus 152 l~vty~L-~-~~L~i~~~~~N------~~~~~~g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~ 222 (309)
T 2hta_A 152 LLARFKV-G-KTCEIELEAHG------EFATTSALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRT 222 (309)
T ss_dssp EEEEEEE-S-SSEEEEEEEES------SEEEEEEECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCE
T ss_pred EEEEEEE-C-CceEEEEEEEC------CeEehhcCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCcc
Confidence 9999999 6 89999999985 8999999999999998777888877 667888776655433345678888899
Q ss_pred CeEEeCCCCeEEEEeCCCCcEEEEEECCCCcEEEeCCcccccccccCCCCCCccceEEeccCccCCCEEeCCCCEEEEEE
Q 024857 159 DKVYLSTPTKIAILDHERKRTFVLRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAACVEKPIILKPGEEWRGRQ 238 (261)
Q Consensus 159 D~vy~~~~~~~~l~d~~~~~~i~i~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~~~~~~L~PGe~~~~~~ 238 (261)
|++|++....++|.++.++++|+|.+++++++|||||+.++++.|.|+++++|++|||||||+..+.++|+|||+++.++
T Consensus 223 D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~ 302 (309)
T 2hta_A 223 DRVYLNPEACSVIHDATLNRTIDVVHHHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQ 302 (309)
T ss_dssp EEEESSCCSEEEEEETTTTEEEEEEEESCSEEEEEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEE
T ss_pred CcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEEEECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEE
Confidence 99998655678999999999999999889999999997666678889988889999999999987779999999999999
Q ss_pred EEEEe
Q 024857 239 EISAV 243 (261)
Q Consensus 239 ~i~~~ 243 (261)
+|+++
T Consensus 303 ~~~~~ 307 (309)
T 2hta_A 303 TICVA 307 (309)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 3
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=4.4e-45 Score=318.11 Aligned_cols=211 Identities=22% Similarity=0.346 Sum_probs=174.1
Q ss_pred CccccCCC-CCCCCcceEEcccccCCCCCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccCCcceEEE
Q 024857 2 GKNCFFLV-ARPLLRIQSQFVEFANHGSLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIWPHRYEFR 80 (261)
Q Consensus 2 ~~~~~~~~-~~~rgG~PvlFP~fg~~~~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~ 80 (261)
++.+.|.. .+||||+||||||||+.. +++|||||++.|+|.+.. .+++...++|.|.+++ +.|+++
T Consensus 58 ~~~~~~~~~~~irGGiPvlfP~~gr~~-~~~HGfaR~~~W~v~~~~-----~~~~~v~l~~~l~~~~-------~~f~l~ 124 (270)
T 1jov_A 58 SEVEPFKNGNAIRGGVPICYPWFGGVK-QPAHGTARIRLWQLSHYY-----ISVHKVRLEFELFSDL-------NIIEAK 124 (270)
T ss_dssp CTTCCCCTTSCCSBSCCEEBSSCGGGS-SSTTBSGGGSBCEEEEEE-----EETTEEEEEEEEECTT-------SCEEEE
T ss_pred CcHHhcCCCCCccCccEEEEeccCCCC-CCCCceecCCCcEEeeec-----cCCCcEEEEEEECCCc-------cccEEE
Confidence 45555665 678999999999999965 799999999999998762 1234557788887543 358899
Q ss_pred EEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEecCCCCceeeCCCCcceeeeeCCeeeecCCCCe
Q 024857 81 LRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVEGLETLDYLDNLKDKERFTEQGDAITFESEVDK 160 (261)
Q Consensus 81 ~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~d~l~~~~~~~~~~~~~~l~~~~D~ 160 (261)
++|+|. |+++++|+|+ |++ ||++|+||||+++++.+++|.++.+ .|+|+++.... ...+.+.+..++|+
T Consensus 125 ~~~~L~----l~~~~~v~N~--g~~--p~~~g~HpyF~v~d~~~~~v~g~~~-~~~d~l~~~~~--~~~~~~~~~~~~D~ 193 (270)
T 1jov_A 125 VSMVFT----DKCHLTFTHY--GEE--SAQAALHTYFNIGDINQVEVQGLPE-TCFNSLNQQQE--NVPSPRHISENVDC 193 (270)
T ss_dssp EEEEES----SSEEEEEEEC--CSS--CEEEEECCEEECSCGGGEEEESCCS-EEEETTTTEEE--ECCSSBCCSSCEEE
T ss_pred EEEEEC----CeEEEEEEeC--Cch--hHhhhcccceecCCcceEEEECCCC-cceeccCCccc--ccCCcccCCCCccc
Confidence 999995 6788899998 875 6899999999999988899999854 78998765332 23456778889999
Q ss_pred EEeCCCCeEEEEeCCCCcEEEEEECCCCcEEEeCCcccccccccCCCCCCccceEEeccCccCCCEEeCCCCEEEEEEEE
Q 024857 161 VYLSTPTKIAILDHERKRTFVLRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAACVEKPIILKPGEEWRGRQEI 240 (261)
Q Consensus 161 vy~~~~~~~~l~d~~~~~~i~i~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~~~~~~L~PGe~~~~~~~i 240 (261)
+|.+.++.++|.++..+++|+|+.++++++||||||. +.|+||++++|++||||||+.. .+.|+|||+++.+++|
T Consensus 194 vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~~---~~~~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i 268 (270)
T 1jov_A 194 IYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWH---KKTSGMSETGYQKMLCLETARI--HHLLEFGESLSVEISL 268 (270)
T ss_dssp EEECSSSEEEEEETTTTEEEEEEEESCSEEEEEECTT---SCCTTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEE
T ss_pred eeCCCCCCEEEEECCCCcEEEEEEcCCCeEEEECCCc---ccccccccccCccEEEeCcccc--ceEECCCCEEEEEEEE
Confidence 9998878899999999999999999999999999975 4689999999999999999764 5789999999888876
Q ss_pred E
Q 024857 241 S 241 (261)
Q Consensus 241 ~ 241 (261)
+
T Consensus 269 ~ 269 (270)
T 1jov_A 269 K 269 (270)
T ss_dssp C
T ss_pred E
Confidence 4
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=5.2e-44 Score=314.24 Aligned_cols=213 Identities=20% Similarity=0.328 Sum_probs=177.2
Q ss_pred cCCCC-CCCCcceEEcccccCCC-----------CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccC
Q 024857 6 FFLVA-RPLLRIQSQFVEFANHG-----------SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIW 73 (261)
Q Consensus 6 ~~~~~-~~rgG~PvlFP~fg~~~-----------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~ 73 (261)
.++++ +++||+||||||+||.. .+++|||+|++.|++++.. +++..+|+|+|.++++++++|
T Consensus 53 ~~~~~~~~~gg~Pvl~P~~gri~~g~~~~~g~~y~l~~HGf~r~~~W~~~~~~------~~~~~~v~l~l~~~~~~~~~~ 126 (289)
T 3k25_A 53 FQDPSLSVRGGIPILFPICGNLPQDQFNHAGKSYRLKQHGFARDLPWEVIGQQ------TQDNARLDLRLSHNDATLEAF 126 (289)
T ss_dssp GGSTTSCCCBSBCEEBSCSSCCGGGEEEETTEEEECCTTBSGGGSCCEEEEEE------CSSSEEEEEEEECCHHHHTTS
T ss_pred ccCcccccCCCCCEEECCCCCCCCCEEEECCEEeecCCCCCcccCCeEEEEec------CCCCcEEEEEEecChhHHhcC
Confidence 34554 48999999999999984 5899999999999998752 234678999999888888999
Q ss_pred CcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEecCCCCceeeCCCCcceeeeeCCeee
Q 024857 74 PHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVEGLETLDYLDNLKDKERFTEQGDAIT 153 (261)
Q Consensus 74 P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~d~l~~~~~~~~~~~~~~ 153 (261)
||+|+++++|+|.+ ++|+++++++|+ ++++|||++|+||||++++..+++|.++. ..|++..... ... ..+.+.
T Consensus 127 P~~~~~~~~y~L~~-~~L~i~~~~~N~--~~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~-~~~-~~~~~~ 200 (289)
T 3k25_A 127 PFAFELVFSYQLQG-HSLRIEQRIANL--GDQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGD-CHG-YDGQLN 200 (289)
T ss_dssp CSCEEEEEEEEEET-TEEEEEEEEEEC--SSSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTCC-EEE-CCSCCC
T ss_pred CceEEEEEEEEEeC-CEEEEEEEEEcC--CCCcceeEEecCcEEccCCcceEEEEcCc-ccccccccCc-ccc-cCCccc
Confidence 99999999999987 899999999999 99999999999999999998889998864 5778754322 211 223444
Q ss_pred ec-CCCCeEEeCC-CCeEEEEeCCCCcEEEEEECC-CCcEEEeCCcccccccccCCCCCCccceEEeccCcc--------
Q 024857 154 FE-SEVDKVYLST-PTKIAILDHERKRTFVLRKDG-LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAACV-------- 222 (261)
Q Consensus 154 l~-~~~D~vy~~~-~~~~~l~d~~~~~~i~i~~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~-------- 222 (261)
+. ..+|++|... ...++|.++..+++|+|..++ ++++|||||.. ++|||||||+.
T Consensus 201 ~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~v~~~~~~~~~vvw~~~~--------------~~fvCvEP~~~~~da~n~~ 266 (289)
T 3k25_A 201 LTSPELDLAFTQISQPRAHFIDPDRNLKIEVSFSELYQTLVLWTVAG--------------KDYLCLEPWSGPRNALNSG 266 (289)
T ss_dssp TTSSEEEEEECCCSSSEEEEEETTTTEEEEEEECTTCCEEEEEEESS--------------SCEEEEEEESSCTTHHHHC
T ss_pred CCchhhceEeecCCCCeEEEEECCCCCEEEEEeCCCCcEEEEEecCC--------------CCEEEEccccCCCCcccCC
Confidence 43 5789999875 357999999999999999985 89999999742 47999999983
Q ss_pred CCCEEeCCCCEEEEEEEEEEee
Q 024857 223 EKPIILKPGEEWRGRQEISAVP 244 (261)
Q Consensus 223 ~~~~~L~PGe~~~~~~~i~~~~ 244 (261)
.+.++|+|||+++++++|+++.
T Consensus 267 ~~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 267 EQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp TTCEEECTTEEEEEEEEEEEEC
T ss_pred CCcEEECCCCeEEEEEEEEEEe
Confidence 4679999999999999999864
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=5.9e-37 Score=269.89 Aligned_cols=208 Identities=20% Similarity=0.340 Sum_probs=158.7
Q ss_pred CCCcceEEcccccCCC-----------CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccCCcceEEE
Q 024857 12 PLLRIQSQFVEFANHG-----------SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIWPHRYEFR 80 (261)
Q Consensus 12 ~rgG~PvlFP~fg~~~-----------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~ 80 (261)
..+++|+||||+||.. ++++|||+|++.|++++. ++.+|+|++.++++++++|||+|+++
T Consensus 42 ~~~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HGf~r~~~w~~~~~---------~~~~v~l~l~~~~~~~~~yP~~~~~~ 112 (294)
T 3q1n_A 42 WNRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDFDVSDK---------SDSAVTFTQHQNAETLKKFPFEYTLA 112 (294)
T ss_dssp CSCSCCEEBSCCSCCGGGEEEETTEEEECCTTBSGGGSBCEEESC---------CSSEEEEEEECCHHHHHHSCCCEEEE
T ss_pred ccCCCCEEEeccCCcCCCEEEECCcEEccCCCCCccCcceEEEEc---------cCCEEEEEEEcCcchhhcCCeEEEEE
Confidence 4668999999999984 679999999999999876 35689999998887789999999999
Q ss_pred EEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cce--eEEecCC-CCcee--e--CCCCcceee--
Q 024857 81 LRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISE--VRVEGLE-TLDYL--D--NLKDKERFT-- 146 (261)
Q Consensus 81 ~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~--l~~~gl~-~~~~~--d--~l~~~~~~~-- 146 (261)
++|+|.+ ++|+|+++++|+ ++++|||++|+||||+++. +.+ |++..-. ...++ | .++++....
T Consensus 113 v~y~L~~-~~L~i~~~~~N~--~~~~~p~~~~~H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~ 189 (294)
T 3q1n_A 113 VTYMLTD-GGLSVHYTVTND--DSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIP 189 (294)
T ss_dssp EEEEEET-TEEEEEEEEEEC--SSSCEEECEEECCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECT
T ss_pred EEEEEeC-CEEEEEEEEEcC--CCCceeeeEecCcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccc
Confidence 9999997 899999999999 9999999999999999983 223 6665321 11133 2 233322211
Q ss_pred e-eCCeeeecC-CCCe-EE-eCC--CCeEEEEeCCCCcEEEEEECCCCcEEEeCCcccccccccCCCCCCccceEEeccC
Q 024857 147 E-QGDAITFES-EVDK-VY-LST--PTKIAILDHERKRTFVLRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAA 220 (261)
Q Consensus 147 ~-~~~~~~l~~-~~D~-vy-~~~--~~~~~l~d~~~~~~i~i~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~ 220 (261)
. ....+.+.. .+|+ +| +.. ...++|.++.+++.|+|.++++|+++||+|.... .+|||||||
T Consensus 190 ~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt~~~~~------------~~~vciEP~ 257 (294)
T 3q1n_A 190 GAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTIWSPEHKK------------APFIAVEPF 257 (294)
T ss_dssp TCBTTEEECCHHHHTTCCEEECCTTCCEEEEECTTCSCCEEEECTTCSEEEEECCTTSC------------CSEEEEEEE
T ss_pred cCCCceecCCHHHhcCCeEEEcCCCccEEEEEeCCCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEeCc
Confidence 1 123345543 3542 33 332 3578999999999999999889999999984321 379999999
Q ss_pred cc--------------CCCEEeCCCCEEEEEEEEEEe
Q 024857 221 CV--------------EKPIILKPGEEWRGRQEISAV 243 (261)
Q Consensus 221 ~~--------------~~~~~L~PGe~~~~~~~i~~~ 243 (261)
+. .+.++|+|||+++.+++|++.
T Consensus 258 tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I~i~ 294 (294)
T 3q1n_A 258 DGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH 294 (294)
T ss_dssp ESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEEEEC
T ss_pred CCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEEC
Confidence 61 246999999999999999873
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.3e-36 Score=269.17 Aligned_cols=207 Identities=19% Similarity=0.291 Sum_probs=158.2
Q ss_pred CCCcceEEcccccCCC-----------CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccCCcceEEE
Q 024857 12 PLLRIQSQFVEFANHG-----------SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIWPHRYEFR 80 (261)
Q Consensus 12 ~rgG~PvlFP~fg~~~-----------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~ 80 (261)
..+|+|+||||+||.. .+++|||+|++.|++++. ++.+|+|++.++++++++|||+|+++
T Consensus 42 ~~~~~pil~P~~nRi~~g~~~~~G~~y~l~~HGf~r~~~w~v~~~---------~~~~v~l~l~~~~~~~~~yP~~~~~~ 112 (307)
T 3dcd_A 42 WGRHAPVLFPIVGRLKNDEYTYKGKTYHLGQHGFARNADFEVENH---------TKESITFLLKDNEETRKVYPFKFEFR 112 (307)
T ss_dssp CCCSSCEEBSCSSCCGGGEEEETTEEEECCTTBSGGGSBCEEEEE---------ETTEEEEEEECCHHHHHHSCCCEEEE
T ss_pred cCCCCcEEEeecCccCCCeEEECCEEEecCCCCCccCcEEEEEEe---------cCCEEEEEEecCcchhhhCCCceEEE
Confidence 4578999999999984 579999999999999876 24689999998877889999999999
Q ss_pred EEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cce--eEEecCCCCceee--CCCCcc------ee
Q 024857 81 LRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISE--VRVEGLETLDYLD--NLKDKE------RF 145 (261)
Q Consensus 81 ~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~--l~~~gl~~~~~~d--~l~~~~------~~ 145 (261)
++|+|.+ ++|+|+++++|+ |+++|||++|+||||+++. ..+ |++..- ..++ .++++. ..
T Consensus 113 v~y~L~~-~~L~i~~~v~N~--g~~~~p~~~g~HpyF~~~~~~~~~~~d~~L~~~a~---~~~~~~~l~~g~~~~~~~~~ 186 (307)
T 3dcd_A 113 VNYNLMN-NLLEENFSVVNK--SDETMIFGVGGHPGFNLPTDHGENKEDFYFDMHPS---VTRVRIPLKDASLDWNNRSL 186 (307)
T ss_dssp EEEEEET-TEEEEEEEEEEC--SSSCEEECEEECCEEECCCTTSCCGGGEEEEEESC---CCEEECCEETTEECGGGCEE
T ss_pred EEEEEeC-CEEEEEEEEECC--CCCcEeEEEEcCcEEEcCCCCCCccccEEEEEcCC---CceeeeecCCcccccccccc
Confidence 9999996 899999999999 9999999999999999983 223 555421 1111 111110 00
Q ss_pred eeeCCeeeecC-CCC--eE-EeCC-C-CeEEEEeCCCCcEEEEEECCCCcEEEeCCcccccccccCCCCCCccceEEecc
Q 024857 146 TEQGDAITFES-EVD--KV-YLST-P-TKIAILDHERKRTFVLRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEA 219 (261)
Q Consensus 146 ~~~~~~~~l~~-~~D--~v-y~~~-~-~~~~l~d~~~~~~i~i~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp 219 (261)
......+.+.. .+| .+ |-.. . ..++|.++.+++.|+|..+++|+++||+|.... .+||||||
T Consensus 187 ~~~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~~~------------~~fvciEP 254 (307)
T 3dcd_A 187 APTDSLIALSDDLFKDDALIYELRGNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYPKT------------DNYVCIEP 254 (307)
T ss_dssp ECTTSCEECCSGGGTTSCEEEECCSSCEEEEEEETTSSCEEEEEEETCSEEEEECCSSSC------------CSEEEEEE
T ss_pred cccCCcccCCHHHcCCceEEEcCCCCceEEEEEeCCCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEcc
Confidence 11123355554 344 33 3333 2 468899998999999999889999999983211 37999999
Q ss_pred Ccc--------------CCCEEeCCCCEEEEEEEEEEeec
Q 024857 220 ACV--------------EKPIILKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 220 ~~~--------------~~~~~L~PGe~~~~~~~i~~~~~ 245 (261)
|+. .+.++|+|||+++++++|++...
T Consensus 255 ~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~i~~~~~ 294 (307)
T 3dcd_A 255 WWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYHST 294 (307)
T ss_dssp EESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEECS
T ss_pred ccCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEEEEC
Confidence 961 25699999999999999999765
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=9.3e-37 Score=272.33 Aligned_cols=217 Identities=19% Similarity=0.268 Sum_probs=161.5
Q ss_pred ccCCCCCCCCcceEEcccccCCC-----------CCC---------CceeeecCCcEEecCCCCCCCCCCCceEEEEEe-
Q 024857 5 CFFLVARPLLRIQSQFVEFANHG-----------SLE---------KHGFARSRVWSIDPDPPPFSANSSSQACVDLIL- 63 (261)
Q Consensus 5 ~~~~~~~~rgG~PvlFP~fg~~~-----------~~~---------~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l- 63 (261)
++|...++++|+||||| +||.. +++ +|||+|++.|+|++.. .+++..+|+|++
T Consensus 56 ~~~~~~~~~~G~pv~~p-~nRi~~g~~~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~-----~~~~~~~v~~~~~ 129 (326)
T 3mwx_A 56 ESFHDTPTLYGIPILFP-PNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTK-----QTDEGVIVETEID 129 (326)
T ss_dssp HHHHHCTTSSSCCEEBS-CSEEETTEEEETTEEEECCCCBTTTTEEESBSCTTSCCEEEEEE-----EESSCEEEEEEEE
T ss_pred hHhhcCccccCceEcCC-CCcccCCEEEECCEEEEccCCCCCCCccccCCccCCceEEEEee-----ccCCceEEEEEEE
Confidence 34556788999999999 68763 344 5999999999998763 122234555554
Q ss_pred -cCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEecCCCCcee--e--C
Q 024857 64 -KHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVEGLETLDYL--D--N 138 (261)
Q Consensus 64 -~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~--d--~ 138 (261)
.+.++++++|||+|+++++|+|.+ ++|+|+++++|+ ++++|||++|+||||+++ +.+.++.. +...++ | .
T Consensus 130 ~~~~~~~~~g~P~~~~~~v~y~L~~-~~L~i~~~~~N~--~~~~~~~~~~~H~yFnl~-~~~~~l~~-~a~~~~~~d~~~ 204 (326)
T 3mwx_A 130 LSELPHVQKQFPHHAVVRMTYTIKE-NTLFKHATVMNK--GKEAFPWGIGYHTTFIFP-AESSLFSL-TADQQWELDERL 204 (326)
T ss_dssp GGGCHHHHHHSCSCEEEEEEEEEET-TEEEEEEEEEEC--SSSCEEECCEECCCEECC-TTTEEEEE-SEEEEEEECTTS
T ss_pred eCCCCccccCCCceEEEEEEEEEcC-CcEEEEEEEEEC--CCCceeeEEeeccccCCC-CCCEEEEE-ECCcEEEeCCcc
Confidence 455667789999999999999997 899999999999 999999999999999998 54444432 122333 2 2
Q ss_pred CCCcceeee------eCCeeeecCCCCeEEeCC------CCeEEEEeCCCCcEEEEEEC-CCCcEEEeCCcccccccccC
Q 024857 139 LKDKERFTE------QGDAITFESEVDKVYLST------PTKIAILDHERKRTFVLRKD-GLPDAVVWNPWDKKAKAMAD 205 (261)
Q Consensus 139 l~~~~~~~~------~~~~~~l~~~~D~vy~~~------~~~~~l~d~~~~~~i~i~~~-~~~~~vvw~p~~~~~~~~~d 205 (261)
++++..... ....+.+..++|++|+.. ...++|.++.++++|+|..+ +++++|||+|+..
T Consensus 205 iptg~~~~~~~~~~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~~------- 277 (326)
T 3mwx_A 205 LPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADGK------- 277 (326)
T ss_dssp CEEEEEEECTTHHHHHHCBCCTTCCCEEEEEESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTSC-------
T ss_pred CCCCccccCcchhhcccCcccCCccccceeeeccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCCC-------
Confidence 333321110 012233455789999764 24789999999999999974 7999999998532
Q ss_pred CCCCCccceEEeccCcc-------------CCCEEeCCCCEEEEEEEEEEeec
Q 024857 206 FGDDEYKHMLCVEAACV-------------EKPIILKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 206 ~~~~~~~~~vCvEp~~~-------------~~~~~L~PGe~~~~~~~i~~~~~ 245 (261)
++|||||||+. .+.++|+|||+++.+++|+++..
T Consensus 278 ------~~~vclEP~~~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~~~~~ 324 (326)
T 3mwx_A 278 ------QGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITIELN 324 (326)
T ss_dssp ------SSEEEEEEESSCTTGGGCCSCHHHHCCEEECTTCEEEEEEEEEEEEC
T ss_pred ------CCEEEECCccCCCCccccCCCccccCCeEECCCCeEEEEEEEEEEec
Confidence 37999999971 24599999999999999999754
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.7e-37 Score=274.37 Aligned_cols=217 Identities=20% Similarity=0.333 Sum_probs=161.9
Q ss_pred ccCCCCCCCCcceEEcccccCCC-----------CCC---------CceeeecCCcEEecCCCCCCCCCCCceEE--EEE
Q 024857 5 CFFLVARPLLRIQSQFVEFANHG-----------SLE---------KHGFARSRVWSIDPDPPPFSANSSSQACV--DLI 62 (261)
Q Consensus 5 ~~~~~~~~rgG~PvlFP~fg~~~-----------~~~---------~HGfar~~~W~v~~~~~~~~~~~~~~~~v--~l~ 62 (261)
++|...++++|+||||| +||+. +++ +|||+|++.|++++.. .+++..+| ++.
T Consensus 63 ~~y~~~~~~~G~pv~~p-~nRi~~g~f~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~-----~~~~~~~v~~~~~ 136 (341)
T 3os7_A 63 EDFKNRPQVYGLPVLFP-PNRIDDGTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKK-----IDQDKALVEVVFD 136 (341)
T ss_dssp HHHHHSGGGSSCCEESS-CSEEETTEEEETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEE-----EETTEEEEEEEEE
T ss_pred hhhhhCCcccceeEeCC-CCcccCCEEEECCEEEEccCCCCCCCcCccCCcccCcEEEEEee-----cCCCccEEEEEEE
Confidence 46777788999999999 57752 233 6999999999998762 11233455 455
Q ss_pred ecCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cceeEEecCCCCcee-
Q 024857 63 LKHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISEVRVEGLETLDYL- 136 (261)
Q Consensus 63 l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~l~~~gl~~~~~~- 136 (261)
+.+.++++++|||+|+++++|+|.+ ++|+|+++++|+ ++++|||++|+||||+++. +.+.++.. +...|+
T Consensus 137 ~~d~~~~~~g~P~~~~~~v~y~L~~-~~L~i~~~~~N~--~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~ 212 (341)
T 3os7_A 137 FTKENEAYKYFSHEFQFKLSYELSS-KGLKQTTSVVNL--SSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWK 212 (341)
T ss_dssp ECTTSTTTTTSCCCEEEEEEEEEET-TEEEEEEEEEEC--SSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEE
T ss_pred eCCCcchhhcCCceEEEEEEEEEeC-CeEEEEEEEEeC--CCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEe
Confidence 5556667789999999999999997 799999999999 9999999999999999982 44444442 223444
Q ss_pred -e--CCCCcceeee--------eCCeeeecCCCCeEEeCC----C----CeEEEEeCCCCcEEEEEEC-CCCcEEEeCCc
Q 024857 137 -D--NLKDKERFTE--------QGDAITFESEVDKVYLST----P----TKIAILDHERKRTFVLRKD-GLPDAVVWNPW 196 (261)
Q Consensus 137 -d--~l~~~~~~~~--------~~~~~~l~~~~D~vy~~~----~----~~~~l~d~~~~~~i~i~~~-~~~~~vvw~p~ 196 (261)
| .++++..... ....+.+..++|++|... . ..++|.++.++++|+|.++ ++|++|||+|+
T Consensus 213 ~d~~~iPtG~~~~v~~~~~df~~~~~~~~~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~ 292 (341)
T 3os7_A 213 QDSRNLPTGESFAPTGEQKEYLENGVAVASHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDM 292 (341)
T ss_dssp ECTTSCEEEEEECCCGGGGGGGTTCBCTTSSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGG
T ss_pred cCcccCCCCccccCCCccchhhcCCcccCCcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCC
Confidence 2 2343322110 012233345799999753 2 3588999999999999995 79999999986
Q ss_pred ccccccccCCCCCCccceEEeccCcc-------------CCCEEeCCCCEEEEEEEEEEee
Q 024857 197 DKKAKAMADFGDDEYKHMLCVEAACV-------------EKPIILKPGEEWRGRQEISAVP 244 (261)
Q Consensus 197 ~~~~~~~~d~~~~~~~~~vCvEp~~~-------------~~~~~L~PGe~~~~~~~i~~~~ 244 (261)
.. ++|||||||+. .+.++|+|||+++.+++|+++.
T Consensus 293 ~~-------------~~~vclEP~~~~pDa~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 293 GD-------------KKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp GC-------------SSEEEEEEESSCTTGGGCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred CC-------------CCEEEECCccCCCCccCCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 32 37999999961 1469999999999999999875
No 9
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=6.8e-36 Score=262.68 Aligned_cols=206 Identities=15% Similarity=0.182 Sum_probs=161.8
Q ss_pred CCCCCcceEEcccccCCC--------------------CCCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhh
Q 024857 10 ARPLLRIQSQFVEFANHG--------------------SLEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEE 69 (261)
Q Consensus 10 ~~~rgG~PvlFP~fg~~~--------------------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~ 69 (261)
.++++|.|+||||+||.. ..++|||+|++.|++++.. +.+|+|+|.+.
T Consensus 42 ~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~~~~~~~HG~~~~~~W~~~~~~---------~~~v~l~l~~~--- 109 (291)
T 3nre_A 42 VATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHS---------DDSLCLVYEHR--- 109 (291)
T ss_dssp CGGGSSEEEEBSCCSBCGGGEEEETTEEEECCCCSTTCSSCBSBSGGGSBCEEEEEC---------SSEEEEEEEEE---
T ss_pred CccccCCcEEEeeCCEecCCEEEECCEEEECCCCCCCCCCCCCCchhcceeEEEEcc---------CCEEEEEEeCC---
Confidence 456899999999999973 2468999999999998762 45788888752
Q ss_pred hccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEecCCCCceee----CCCCccee
Q 024857 70 VKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVEGLETLDYLD----NLKDKERF 145 (261)
Q Consensus 70 ~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~gl~~~~~~d----~l~~~~~~ 145 (261)
+ |||+|+++++|+|.+ ++|+|+++++|+ ++++|||++|+||||++++...+++. ...|++ .+++++..
T Consensus 110 -~-~P~~~~~~v~y~L~~-~~L~i~~~~~N~--~~~~~~~~~~~H~YFnl~~~~~l~i~---a~~~~~~d~~~iPtg~~~ 181 (291)
T 3nre_A 110 -S-GVYHYRVSQAFHLTA-DTLTVTLSVTNQ--GAETLPFGTGWHPYFPLSPQTRIQAQ---ASGYWLEREQWLAGEFCE 181 (291)
T ss_dssp -S-SSCEEEEEEEEEECS-SEEEEEEEEEEC--SSSCEEECCEEEEEEECCTTCEEEEC---CSEEEEECGGGCEEEEES
T ss_pred -C-CCceEEEEEEEEEeC-CeEEEEEEEEEC--CCCCccceEEcCccEecCCCeEEEEE---CCEEEEcCCCcCCCcccc
Confidence 6 999999999999997 899999999999 99999999999999999987667765 345543 34544321
Q ss_pred eeeCCeeeec-------CCCCeEEeCCCCeEEEEeCCCCcEEEEEECC-CCcEEEeCCcccccccccCCCCCCcc-ceEE
Q 024857 146 TEQGDAITFE-------SEVDKVYLSTPTKIAILDHERKRTFVLRKDG-LPDAVVWNPWDKKAKAMADFGDDEYK-HMLC 216 (261)
Q Consensus 146 ~~~~~~~~l~-------~~~D~vy~~~~~~~~l~d~~~~~~i~i~~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~-~~vC 216 (261)
. .+..++|. .++|++|......++|.++.++++|+|.++. .+.+|||||+... +.+|+ .|||
T Consensus 182 v-~~t~~df~~~~~l~~~~~D~~f~~~~~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~~--------~~~~~~~~vc 252 (291)
T 3nre_A 182 Q-LPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF--------DKGYAFDFFC 252 (291)
T ss_dssp S-CCGGGCCSSCEECCSSCEEEEEESCCSEEEEEEGGGTEEEEEEEESCCSEEEEEECCTTT--------CTTCCSCEEE
T ss_pred C-CCCcccccCCcCCCCccccceeecCCccEEEEECCCCeEEEEEeCCCCceEEEEcCCCCC--------CCCccCCEEE
Confidence 1 22334442 3699999987678999999999999999873 2248999986211 23355 7999
Q ss_pred eccCc-c----C-----CCEEeCCCCEEEEEEEEEEee
Q 024857 217 VEAAC-V----E-----KPIILKPGEEWRGRQEISAVP 244 (261)
Q Consensus 217 vEp~~-~----~-----~~~~L~PGe~~~~~~~i~~~~ 244 (261)
||||+ . + +.++|+|||+++.+++|+++.
T Consensus 253 lEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~~~~~~~ 290 (291)
T 3nre_A 253 LEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 290 (291)
T ss_dssp EEEESSCTTGGGSGGGTTCEEECTTCEEEEEEEEEEEE
T ss_pred EcCccCCCCCCcCCCCCCCEEECCCCEEEEEEEEEEEe
Confidence 99996 2 1 469999999999999999875
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=253.96 Aligned_cols=224 Identities=13% Similarity=0.169 Sum_probs=160.6
Q ss_pred CccccCCCCCCCCcceEEcccccCCC-----------CCC-------Cceee---ecCCcEEecCCCCCCCCCCCceEEE
Q 024857 2 GKNCFFLVARPLLRIQSQFVEFANHG-----------SLE-------KHGFA---RSRVWSIDPDPPPFSANSSSQACVD 60 (261)
Q Consensus 2 ~~~~~~~~~~~rgG~PvlFP~fg~~~-----------~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~v~ 60 (261)
++.+.|...+...|. +++||+||.. .++ +|||+ |++.|++++... .+.++.+|+
T Consensus 47 ~~~~~y~~~~~~~G~-~l~p~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~----~~~~~~~v~ 121 (342)
T 1yga_A 47 SNVQDYLTDGNMMGA-TVGRYANRIAKGVFSLDDGPHKLTVNNCGNTNHSSISSLNLKQYKASPVEN----PSKGVYVVE 121 (342)
T ss_dssp SSGGGGTTCSSCTTC-EECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEECCCEE----EETTEEEEE
T ss_pred CChHHhccCCCeEcc-EECCCCCceeCCEEEECCEEEEcCCCCCCcccCCCccccCcceeeeEEeec----cCCCCCEEE
Confidence 456777765544454 5569999873 343 59999 699999976410 001345788
Q ss_pred EEecCC--hhhhccCCcceEEEEEEEEcC-CCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC------cceeEEecCC
Q 024857 61 LILKHS--EEEVKIWPHRYEFRLRITLGP-GGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD------ISEVRVEGLE 131 (261)
Q Consensus 61 l~l~~~--~~~~~~~P~~f~l~~ty~L~~-~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~------~~~l~~~gl~ 131 (261)
|+|.+. +++++.|||+|+++++|+|.+ +++|+|+|+++|+ ++++|||++|+||||+++. +.+.++. ++
T Consensus 122 l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~~~~~N~--~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~ 198 (342)
T 1yga_A 122 FKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLV--RGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VC 198 (342)
T ss_dssp EEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEEEEE--ESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ES
T ss_pred EEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEEEEEEEeC--CCCceEEeeeccceEEcCCCCCCCcccceEEE-Ee
Confidence 888764 444556999999999999983 4799999999999 9999999999999999982 4455555 44
Q ss_pred CCceee--C---CCCcceeeeeCCe------eeecC---CCCeEEeCCC----------------CeEEEEeCCCCcEEE
Q 024857 132 TLDYLD--N---LKDKERFTEQGDA------ITFES---EVDKVYLSTP----------------TKIAILDHERKRTFV 181 (261)
Q Consensus 132 ~~~~~d--~---l~~~~~~~~~~~~------~~l~~---~~D~vy~~~~----------------~~~~l~d~~~~~~i~ 181 (261)
...|++ . +++++........ ..+.. .+|++|+... ..++|.++.+++.|+
T Consensus 199 a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~ 278 (342)
T 1yga_A 199 SNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFE 278 (342)
T ss_dssp CCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSCCCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEE
T ss_pred CCeEEEECCCCCCcCCCeEecCCCcccccCCeecCcccCCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEE
Confidence 556653 2 4444321111222 23333 6999997542 357889999999999
Q ss_pred EEECCCCcEEEeCCcccccccccCCCCCCc--cceEEeccCccC---------CCEEeCCCCEEEEEEEEEEe
Q 024857 182 LRKDGLPDAVVWNPWDKKAKAMADFGDDEY--KHMLCVEAACVE---------KPIILKPGEEWRGRQEISAV 243 (261)
Q Consensus 182 i~~~~~~~~vvw~p~~~~~~~~~d~~~~~~--~~~vCvEp~~~~---------~~~~L~PGe~~~~~~~i~~~ 243 (261)
|.++ +|++|||||+.- +++| +.||||||+... +.++|+|||+++.+++|++.
T Consensus 279 v~~~-~p~~~vyt~~~~---------~~~y~~~~~vclEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 279 VSTT-EPTVHLYTGDNL---------CGKFVPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp EEES-SSEEEEECCTTC---------CTTSCTTSCBEEEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred EEeC-CCEEEEECCCCc---------cccCCCCCEEEEECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 9997 999999998521 1223 579999998631 23899999999999999874
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=1.4e-33 Score=253.42 Aligned_cols=221 Identities=18% Similarity=0.244 Sum_probs=156.8
Q ss_pred ccccCCCCCCCCcceEEcccccCCC-----------CCC-------Cceeee---cCCcEEecCCCCCCCCCCCceEEEE
Q 024857 3 KNCFFLVARPLLRIQSQFVEFANHG-----------SLE-------KHGFAR---SRVWSIDPDPPPFSANSSSQACVDL 61 (261)
Q Consensus 3 ~~~~~~~~~~rgG~PvlFP~fg~~~-----------~~~-------~HGfar---~~~W~v~~~~~~~~~~~~~~~~v~l 61 (261)
+.++|...+...|+ +||||+||+. .++ +|||+| ++.|++++. + .+|+|
T Consensus 63 ~~~~y~~~~~~~G~-~l~p~~nRi~~g~f~~~G~~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~---------~-~~v~l 131 (344)
T 1snz_A 63 ELEGYLQKQPYFGA-VIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVL---------S-NGVQF 131 (344)
T ss_dssp SHHHHHSSCSCTTC-EECSBCSEEGGGEEEETTEEEECCCTBTTBEETTSSSCGGGSBCEEEEE---------T-TEEEE
T ss_pred ChHHHhhCCCceee-EecCcCCcccCCEEEECCEEEECCCCCCCcccCCCccccccceeeEEEe---------C-CEEEE
Confidence 34556555544454 8999999874 333 899995 899999875 2 46888
Q ss_pred EecCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cceeEEecCCCCcee
Q 024857 62 ILKHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISEVRVEGLETLDYL 136 (261)
Q Consensus 62 ~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~l~~~gl~~~~~~ 136 (261)
+|.+.+ +.++|||+|+++++|+|++ ++|+|+|+++| +++|||++|+||||+++. +.+.++. ++...|+
T Consensus 132 ~l~~~~-~~~gyP~~~~~~vty~L~~-~~L~i~~~a~~----d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~ 204 (344)
T 1snz_A 132 SRISPD-GEEGYPGELKVWVTYTLDG-GELIVNYRAQA----SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYL 204 (344)
T ss_dssp EEEECT-TGGGCCSCEEEEEEEEEET-TEEEEEEEEEE----SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEEC
T ss_pred EEECCC-cCCCCCEEEEEEEEEEEcC-CEEEEEEEEEe----CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEE
Confidence 888755 5789999999999999998 59999999995 689999999999999984 3443343 2333444
Q ss_pred e----CCCCcceeeeeCCeeeecC--------------CCCeEEeCCC-----CeEEEEeCCCCcEEEEEECCCCcEEEe
Q 024857 137 D----NLKDKERFTEQGDAITFES--------------EVDKVYLSTP-----TKIAILDHERKRTFVLRKDGLPDAVVW 193 (261)
Q Consensus 137 d----~l~~~~~~~~~~~~~~l~~--------------~~D~vy~~~~-----~~~~l~d~~~~~~i~i~~~~~~~~vvw 193 (261)
+ .+++++.....+..++|.. ++|++|+... ..++|.++.+++.|+|.++ +|.+|||
T Consensus 205 ~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vy 283 (344)
T 1snz_A 205 PVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFY 283 (344)
T ss_dssp CBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEE
T ss_pred EeCCCCcccCceecCCCCcccccCCcCcChhhcccccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEE
Confidence 2 3444432211122233322 4899997532 3578999999999999997 9999999
Q ss_pred CCcccccccccCCCCCCc--cceEEeccCccC--------CCEEeCCCCEEEEEEEEEEe
Q 024857 194 NPWDKKAKAMADFGDDEY--KHMLCVEAACVE--------KPIILKPGEEWRGRQEISAV 243 (261)
Q Consensus 194 ~p~~~~~~~~~d~~~~~~--~~~vCvEp~~~~--------~~~~L~PGe~~~~~~~i~~~ 243 (261)
+|..-.. .+.+..+..| +.|||||||... +.++|+|||+++.+++|+|.
T Consensus 284 t~~~~~~-~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~~~~~L~pGe~~~~~~~~~f~ 342 (344)
T 1snz_A 284 TGNFLDG-TLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFS 342 (344)
T ss_dssp CCTTCEE-EEECGGGCEEETTSCBEEEEESCTTGGGCTTSCCCEECTTSCEEEEEEEEEE
T ss_pred CCCCCCc-cccCCCCcccCCCCEEEEeCcCCCCcccCCCCCCeEECCCCEEEEEEEEEEE
Confidence 9832110 1112212223 479999999631 34899999999999999985
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.97 E-value=2.7e-31 Score=238.11 Aligned_cols=220 Identities=12% Similarity=0.170 Sum_probs=153.5
Q ss_pred ccCCCCCCCCcceEEcccccCCC-----------CCC-------Cceee---ecCCcEEecCCCCCCCCCCCceEEEEEe
Q 024857 5 CFFLVARPLLRIQSQFVEFANHG-----------SLE-------KHGFA---RSRVWSIDPDPPPFSANSSSQACVDLIL 63 (261)
Q Consensus 5 ~~~~~~~~rgG~PvlFP~fg~~~-----------~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~v~l~l 63 (261)
++|...+...| ++++||.||+. .++ +|||+ +++.|++++. ++.+|+|+|
T Consensus 57 ~~y~~~~~~~G-~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~---------~~~~v~l~l 126 (339)
T 1lur_A 57 DEFEKDAASIG-KTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRH---------APESVSFSV 126 (339)
T ss_dssp HHHHHCSSCTT-CEECSBCSEEGGGEEEETTEEEECCCSBTTBEETTCTTSGGGSBCEEEEE---------ETTEEEEEE
T ss_pred HHhccCCCccc-cEecCcCCeecCCEEEECCEEEECCCCCCCcccCCCCcccccceeeEEEc---------cCCEEEEEE
Confidence 44544433334 57789998874 344 99999 5899999865 245688998
Q ss_pred cCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC---cceeEEecCCCCcee--e-
Q 024857 64 KHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD---ISEVRVEGLETLDYL--D- 137 (261)
Q Consensus 64 ~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~---~~~l~~~gl~~~~~~--d- 137 (261)
.+.+ +.++|||+|+++++|+|+++++|+|+|+++ ++++|||++|+|||||++. +.+.++. ++...|+ |
T Consensus 127 ~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~----~d~~tp~~lg~HpYFnl~~~~~i~~~~L~-i~a~~~~~~d~ 200 (339)
T 1lur_A 127 RANE-QDDGLPGDAKIDVTYTVNDRNQLIIEHHAT----CDTPGLLALTNHAYWNLDGSDTVAEHFLE-MEADEFVEVDD 200 (339)
T ss_dssp EEEH-HHHSSSSEEEEEEEEEECTTSEEEEEEEEE----CSSCEECBCEECCEECSSCCSCSTTCEEE-ECEEEEEEECT
T ss_pred ECCC-cCCCCCeEEEEEEEEEECCCCeEEEEEEEe----CCCCeEEeeeccceEECCCCCcccCEEEE-EECCEEEEeCC
Confidence 8755 578999999999999998558999999995 8999999999999999984 3443333 2233444 2
Q ss_pred -CCCCcceeeeeC------CeeeecC---------CCCeEEeCC---C-----CeEEEEeCCCCcEEEEEECCCCcEEEe
Q 024857 138 -NLKDKERFTEQG------DAITFES---------EVDKVYLST---P-----TKIAILDHERKRTFVLRKDGLPDAVVW 193 (261)
Q Consensus 138 -~l~~~~~~~~~~------~~~~l~~---------~~D~vy~~~---~-----~~~~l~d~~~~~~i~i~~~~~~~~vvw 193 (261)
.+++++.....+ ....+.. ++|++|+.. . ..++|.++.+++.|+|.++ +|.++||
T Consensus 201 ~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vy 279 (339)
T 1lur_A 201 TFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLY 279 (339)
T ss_dssp TSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEE
T ss_pred CCccCCCEEccCCCcccccCceecCchhcccccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEE
Confidence 233332111111 1223332 689999642 2 3588999999999999997 9999999
Q ss_pred CCcccccccccCCCCCC--ccceEEeccCccC--------CCEEeCCCCEEEEEEEEEEee
Q 024857 194 NPWDKKAKAMADFGDDE--YKHMLCVEAACVE--------KPIILKPGEEWRGRQEISAVP 244 (261)
Q Consensus 194 ~p~~~~~~~~~d~~~~~--~~~~vCvEp~~~~--------~~~~L~PGe~~~~~~~i~~~~ 244 (261)
+|+.-. ..+. .+.. .+.|||||||+.. +.++|+|||+++.+++|+|.-
T Consensus 280 t~~~~~--~~g~-~g~~y~~~~~vclEp~~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~ 337 (339)
T 1lur_A 280 ASKFLD--CKGK-KGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFSH 337 (339)
T ss_dssp CCTTCC--EECG-GGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEEEEE
T ss_pred CCCCcc--ccCC-CCcccCCCCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEEEE
Confidence 985210 0000 0011 2469999999831 238999999999999999864
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.97 E-value=9e-30 Score=228.79 Aligned_cols=222 Identities=12% Similarity=0.180 Sum_probs=152.1
Q ss_pred cccCCCCCCCCcceEEcccccCCC-----------CCC-------Cceee---ecCCcEEecCCCCCCCCCCCceEEEEE
Q 024857 4 NCFFLVARPLLRIQSQFVEFANHG-----------SLE-------KHGFA---RSRVWSIDPDPPPFSANSSSQACVDLI 62 (261)
Q Consensus 4 ~~~~~~~~~rgG~PvlFP~fg~~~-----------~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~v~l~ 62 (261)
.++|...+...| |+|||+.||+. .++ +||++ |++.|++++.. ++...+|+|+
T Consensus 51 ~~~y~~~~~~~G-~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~------~~~~~~v~l~ 123 (347)
T 1nsx_A 51 AKEYLEKDAYPG-ATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTD------LGAEVQVKFS 123 (347)
T ss_dssp HHHHHHTCSCTT-CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSTTCGGGSBCEEEEEE------CSSEEEEEEE
T ss_pred HHHHhhCCCeEe-eEEcccCCcccCCEEEECCEEEEccCCCCCcccCCCCcccccceEEEEEcc------CCcceEEEEE
Confidence 345543333233 89999999874 455 89999 99999998752 1112379999
Q ss_pred ecCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cce--eEEecCCCCce
Q 024857 63 LKHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISE--VRVEGLETLDY 135 (261)
Q Consensus 63 l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~--l~~~gl~~~~~ 135 (261)
+.+. ++.++|||+|+++++|+|+++++|+|+|+++ ++++|||++|+|||||++. +.+ |++. ...|
T Consensus 124 l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~----~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i~---a~~~ 195 (347)
T 1nsx_A 124 LVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI----SDKDTVFNPTGNVYFNLNGDASESVENHGLRLA---ASRF 195 (347)
T ss_dssp EEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE----ESSCEECBCEECCEECTTSSTTSCGGGSEEEEC---EEEE
T ss_pred EECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE----cCCCeEEeeeccceEecCCCCCCceeceEEEEE---CCeE
Confidence 9876 4678999999999999998558999999998 7899999999999999984 233 5543 1233
Q ss_pred e--e--C-CCCcceeeeeC------Ceeeec-------------CCCCeEEeCCC-----CeEEEEeCCCCcEEEEEECC
Q 024857 136 L--D--N-LKDKERFTEQG------DAITFE-------------SEVDKVYLSTP-----TKIAILDHERKRTFVLRKDG 186 (261)
Q Consensus 136 ~--d--~-l~~~~~~~~~~------~~~~l~-------------~~~D~vy~~~~-----~~~~l~d~~~~~~i~i~~~~ 186 (261)
+ | . +++++.....+ ....+. .++|++|+... ..++|.+ +++.|+|.++
T Consensus 196 ~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~- 272 (347)
T 1nsx_A 196 VPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD- 272 (347)
T ss_dssp CCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHHHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-
T ss_pred EEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhhhcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-
Confidence 2 2 2 45443211111 112221 25899996431 3578887 7899999997
Q ss_pred CCcEEEeCCccccccc--ccCCCCCCccceEEeccCcc----C----CCEEeCCCCEEEEEEEEEEeec
Q 024857 187 LPDAVVWNPWDKKAKA--MADFGDDEYKHMLCVEAACV----E----KPIILKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 187 ~~~~vvw~p~~~~~~~--~~d~~~~~~~~~vCvEp~~~----~----~~~~L~PGe~~~~~~~i~~~~~ 245 (261)
+|.++||++..-.. + ..+ .....+.+||||||+. + +.++|+|||+++.+++|+|...
T Consensus 273 ~p~lqvyt~~~~~~-g~~~~g-~~~~~~~~vclEpq~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 339 (347)
T 1nsx_A 273 QPSIVIFTANFGDL-GTLYHE-KKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIYSLHTK 339 (347)
T ss_dssp SSEEEEECCCCTTC-CCEETT-EECCTTCCEECEEESCTTTTTCGGGCCCEECTTCEEEEEEEEEEEEC
T ss_pred CCEEEEECCCCCcc-ccccCC-cccCCcCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEEEec
Confidence 99999999741100 0 000 0001245799999983 1 3489999999999999998654
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.96 E-value=3.3e-28 Score=217.20 Aligned_cols=223 Identities=19% Similarity=0.255 Sum_probs=154.3
Q ss_pred ccccCCCCCCCCcceEEcccccCCC-----------CCCC-------ceee--ecCCcEEecCCCCCCCCCCCceEEEEE
Q 024857 3 KNCFFLVARPLLRIQSQFVEFANHG-----------SLEK-------HGFA--RSRVWSIDPDPPPFSANSSSQACVDLI 62 (261)
Q Consensus 3 ~~~~~~~~~~rgG~PvlFP~fg~~~-----------~~~~-------HGfa--r~~~W~v~~~~~~~~~~~~~~~~v~l~ 62 (261)
+.++|...+...| ++|+||.||+. .+++ ||++ +.+.|++... .+.++.+|+|+
T Consensus 56 ~~~~y~~~~~~~G-~~lgp~anRI~~g~f~~~G~~y~L~~N~g~n~LHGg~g~~~~~W~v~~~------~~~~~~~v~l~ 128 (338)
T 3imh_A 56 SPEDYSKERNFLG-GTVGRIAGRVRAGQWKHGNEIHQLPLNDGDNHIHGGIGTDMHVWDFRPS------CDSEHARVDLT 128 (338)
T ss_dssp SGGGGGTSCCCTT-CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSSCGGGSBCEEEEE------ECSSEEEEEEE
T ss_pred ChHHhccCCCeEe-eEEEeeCCEecCCEEEECCEEEECCCCCCCcCCCCCCCcCCceEEEEee------eecCCCEEEEE
Confidence 3456665554445 59999999874 3454 9998 8899999542 11246789999
Q ss_pred ecCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-cce--eEEecCCCCcee--e
Q 024857 63 LKHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-ISE--VRVEGLETLDYL--D 137 (261)
Q Consensus 63 l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-~~~--l~~~gl~~~~~~--d 137 (261)
+.+.+ ..++|||+|+++++|+|+++++|+|+|+++ ++++|||++|+|||||+++ +.+ |++. ...|+ |
T Consensus 129 l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~----~d~~tp~nlg~HpYFnL~g~i~~~~L~i~---a~~~~~~d 200 (338)
T 3imh_A 129 LFDPD-GNNDYPGNLKLHARYELDNENNLHYLLEAV----SDKLTIFNPVNHTYFNLGERAEDLNLQMN---ADYYLPVD 200 (338)
T ss_dssp EEECT-TGGGCCSCEEEEEEEEEETTSEEEEEEEEE----ESSSEECBCEECCEECTTSCGGGCEEEEC---EEEECCBC
T ss_pred EECCc-cccCCCeEEEEEEEEEEecCCeEEEEEEEe----cCCCeEEEEeeCCEEeCCCCcCCeEEEEE---cCcEEEeC
Confidence 98754 578999999999999999757899999998 6899999999999999984 433 4443 22332 2
Q ss_pred --CCCCcceeeeeCCeeee-------------------cCCCCeEEeCCC--CeEEEEeCCCCcEEEEEECCCCcEEEeC
Q 024857 138 --NLKDKERFTEQGDAITF-------------------ESEVDKVYLSTP--TKIAILDHERKRTFVLRKDGLPDAVVWN 194 (261)
Q Consensus 138 --~l~~~~~~~~~~~~~~l-------------------~~~~D~vy~~~~--~~~~l~d~~~~~~i~i~~~~~~~~vvw~ 194 (261)
.+|+++.....+..++| ..++|++|.... ..++|.+ +|++|+|.++ .|.++||+
T Consensus 201 ~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~Dh~f~l~~~~~~a~l~~--sg~~l~v~t~-~p~~q~YT 277 (338)
T 3imh_A 201 EAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGNNPAALLSS--NKHRLIVKTN-APALVLYA 277 (338)
T ss_dssp TTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCEEEEEECSCSCSEEEEC--SSEEEEEEES-SSEEEEEC
T ss_pred CccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCCCCceeecCCceEEEEEC--CCeEEEEEeC-CCEEEEeC
Confidence 34544321111111111 236999997532 2577765 7899999986 89999999
Q ss_pred CcccccccccCCCCCCccceEEeccCccC----C--CEEeCCCCEEEEEEEEEEeec
Q 024857 195 PWDKKAKAMADFGDDEYKHMLCVEAACVE----K--PIILKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 195 p~~~~~~~~~d~~~~~~~~~vCvEp~~~~----~--~~~L~PGe~~~~~~~i~~~~~ 245 (261)
+...... +.-...+.+..|||||+... + .++|+|||+++.++.|+|+.-
T Consensus 278 gn~l~~~--g~g~~~~~~~g~clE~q~~P~n~~~f~~~vL~pGe~y~~~t~y~f~~~ 332 (338)
T 3imh_A 278 GNHFNHT--GIVNNIGQYDGITFEAQCPPAEGNDLGQITLLPFEKFKRTVDWKFEEG 332 (338)
T ss_dssp CTTCCSB--TTBTTCCTTSCEECEEESCCCSSSCCGGGEECTTCCEEEEEEEEEEEC
T ss_pred CCCcCCC--CCCcccCccCEEEEEccCCCCCCCCCCCeEECCCCEEEEEEEEEECCc
Confidence 7422110 00001123469999999742 1 289999999999999999763
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.96 E-value=4e-28 Score=236.15 Aligned_cols=224 Identities=11% Similarity=0.108 Sum_probs=155.0
Q ss_pred ccccCCC-CCCCCcceEEcccccCCC-----------CCC-------Cceeee---cCCcEEecCCCCCCCCCCCceEEE
Q 024857 3 KNCFFLV-ARPLLRIQSQFVEFANHG-----------SLE-------KHGFAR---SRVWSIDPDPPPFSANSSSQACVD 60 (261)
Q Consensus 3 ~~~~~~~-~~~rgG~PvlFP~fg~~~-----------~~~-------~HGfar---~~~W~v~~~~~~~~~~~~~~~~v~ 60 (261)
+.++|.. .+... -++++|+.||+. +++ +|||++ ++.|++..... .+++..+++
T Consensus 411 ~~~~y~~~~~~~~-g~~l~~~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~----~~~~~~~~~ 485 (699)
T 1z45_A 411 NEEGYLNPDSAYI-GATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQN----PSKDVFTAE 485 (699)
T ss_dssp SHHHHTCTTCCCT-TCEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEEEEEEE----EETTEEEEE
T ss_pred CHHHHhhcCCCcc-ccccCcccCeecCcEEEECCEEEEccCCCCCcccCCCccccceeecceeeecc----CCCCcceEE
Confidence 3445654 23333 467899999874 344 499994 89999842210 001224799
Q ss_pred EEecCChhhhccCCcceEEEEEEEEc-CCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCC-----cceeEEecCCCCc
Q 024857 61 LILKHSEEEVKIWPHRYEFRLRITLG-PGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD-----ISEVRVEGLETLD 134 (261)
Q Consensus 61 l~l~~~~~~~~~~P~~f~l~~ty~L~-~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~-----~~~l~~~gl~~~~ 134 (261)
|+|.+.+. .++|||+|+++++|+|+ ++++|+|+|+++|+ ++++|||++|+|||||++. +.+.++. ++...
T Consensus 486 ~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~~~~n~--~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~ 561 (699)
T 1z45_A 486 YMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLT--AGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKK 561 (699)
T ss_dssp EEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEEEEEEE--ESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCE
T ss_pred EEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEEEEEec--CCCCceecccccceEeecCCCCCCccccEEE-EecCe
Confidence 99988776 88999999999999998 34899999999999 8999999999999999983 3444443 23345
Q ss_pred eee----CCCCcceeeeeCC------eeeec---CCCCeEEeCCC---------------CeEEEEeCCCCcEEEEEECC
Q 024857 135 YLD----NLKDKERFTEQGD------AITFE---SEVDKVYLSTP---------------TKIAILDHERKRTFVLRKDG 186 (261)
Q Consensus 135 ~~d----~l~~~~~~~~~~~------~~~l~---~~~D~vy~~~~---------------~~~~l~d~~~~~~i~i~~~~ 186 (261)
|++ .+++++.....+. ...+. .++|++|+... ..++|.++.+++.|+|.++
T Consensus 562 ~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~- 640 (699)
T 1z45_A 562 SVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST- 640 (699)
T ss_dssp EEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-
T ss_pred EEecCCCCCCCCCcccCcCCCcccCCcccccccCCCCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-
Confidence 542 2344432111111 11222 27899997542 2378999999999999997
Q ss_pred CCcEEEeCCcccccccccCCCCCCccceEEeccCcc----C-----CCEEeCCCCEEEEEEEEEEe
Q 024857 187 LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAACV----E-----KPIILKPGEEWRGRQEISAV 243 (261)
Q Consensus 187 ~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~----~-----~~~~L~PGe~~~~~~~i~~~ 243 (261)
+|.++||++..-. .+...+.+||||||.. + +.++|+|||+++.+++|+|.
T Consensus 641 ~p~~~~yt~~~~~-------~~~~~~~~~clEp~~~pda~n~~~~~~~~~L~pge~~~~~~~~~f~ 699 (699)
T 1z45_A 641 EPTYQFYTGDFLS-------AGYEARQGFAIEPGRYIDAINQENWKDCVTLKNGETYGSKIVYRFS 699 (699)
T ss_dssp SSEEEEECCTTCC-------TTCCTTSCEEEEEESCSSGGGCTTTGGGGEEETTCEEEEEEEEEEC
T ss_pred CCEEEEEeCCCCC-------CCCCCCCEEEEecCCCCCccCcccCCCCcEECCCCEEEEEEEEEEC
Confidence 9999999973210 0011247899999962 1 23799999999999999873
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.79 E-value=1.3e-18 Score=157.91 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=125.0
Q ss_pred CCCceeeecCCcEEecCCCCCCCCCCCceEEEEEecCChhhhccCCcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEE
Q 024857 29 LEKHGFARSRVWSIDPDPPPFSANSSSQACVDLILKHSEEEVKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFA 108 (261)
Q Consensus 29 ~~~HGfar~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~p 108 (261)
.++||++++.+|+.+.... .+++...++++....+....+|||.++.+++|+|.+ ++|+|+++|+|. |+++||
T Consensus 133 ~~LHG~~~~~pa~~~~~~~----~~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~-~~l~i~~~VtN~--g~~p~P 205 (384)
T 3ty1_A 133 YTLHGKAGNTPASLVEVEV----ADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGS-NSFSLHDVLTNH--ADYPHD 205 (384)
T ss_dssp ECTTCSGGGSCCSEEEEEE----ESSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTC-SEEEEEEEEEEC--SSSCEE
T ss_pred ccccccccCCCcceeEEEe----cCCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCC-CEEEEEEEEEEC--CCCCCc
Confidence 6899999999944421100 001234455554443444667888888899998887 899999999999 999999
Q ss_pred EeeeeceeeecCCc-ceeEEecCCCCceeeCC---CCcc-eeeeeCCeeeecCCCCeEEe-C----CCC--eEEEEeCCC
Q 024857 109 FTFAYHTYFAVSDI-SEVRVEGLETLDYLDNL---KDKE-RFTEQGDAITFESEVDKVYL-S----TPT--KIAILDHER 176 (261)
Q Consensus 109 f~~g~HpYF~v~~~-~~l~~~gl~~~~~~d~l---~~~~-~~~~~~~~~~l~~~~D~vy~-~----~~~--~~~l~d~~~ 176 (261)
|++++|+||..|-. ++.++. ++....+... ..+. .+..... +...-.+.+|. + ..+ .+.|.++..
T Consensus 206 ~~~~~H~nfg~Pll~~g~rl~-~p~~~~~p~~~~~~~~l~~~~~~~~--p~~~~~E~vf~~d~~~d~~G~~~~~l~n~~~ 282 (384)
T 3ty1_A 206 YQIIYHSNFGTPILEEGARFL-APISSISPFNDYAKSGLKTWQTYQG--PTKDFDEMVFNIQPLADENHQTLAAVVNKAG 282 (384)
T ss_dssp EEEEEEEEECTTTCCTTCEEE-CCEEEEEESSGGGGGGSTTTTBCCC--CCTTCCCEEEEEEECCCTTSEEEEEEECSSS
T ss_pred hheecccccCCCccCCCcEEE-eccceeccccccccccccchhhccC--CCCCCCceEEEEeccccCCCceEEEEEecCC
Confidence 99999999998732 234443 1222222110 0000 0000000 00111235552 1 223 477888888
Q ss_pred CcEEEEEEC--CCCcEEEeCCcccccccccCCCCCCccceE-EeccCcc-----------CCCEEeCCCCEEEEEEEEEE
Q 024857 177 KRTFVLRKD--GLPDAVVWNPWDKKAKAMADFGDDEYKHML-CVEAACV-----------EKPIILKPGEEWRGRQEISA 242 (261)
Q Consensus 177 ~~~i~i~~~--~~~~~vvw~p~~~~~~~~~d~~~~~~~~~v-CvEp~~~-----------~~~~~L~PGe~~~~~~~i~~ 242 (261)
+..+.+..+ .+|++++|..... .+ ..|+ |||||+. ..++.|+|||+++++++|.+
T Consensus 283 g~~~~l~f~~~~fP~l~~W~~~~~----------~~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~~~i~v 351 (384)
T 3ty1_A 283 DKGASIQFDTRQLPVLTLWKNTDT----------VK-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTL 351 (384)
T ss_dssp SCEEEEEEETTTSCEEEEEEEESC----------TT-TCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEEEEEEE
T ss_pred CcEEEEEEchHHCCHhHhhcccCC----------CC-CccEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEEEEEEE
Confidence 889888874 6899999976210 01 1265 9999983 25799999999999999998
Q ss_pred eec
Q 024857 243 VPS 245 (261)
Q Consensus 243 ~~~ 245 (261)
...
T Consensus 352 ~~~ 354 (384)
T 3ty1_A 352 LHD 354 (384)
T ss_dssp ECS
T ss_pred ecC
Confidence 643
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=75.14 E-value=2.4 Score=30.05 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=28.3
Q ss_pred EEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEe
Q 024857 83 ITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 83 y~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~ 128 (261)
+.|.. +.=+++++|+|+ ||+ |++.|-|-.|-=.+ ..|.|+
T Consensus 13 I~lN~-gr~~~~l~V~Nt--GDR--PIQVGSHyHF~E~N-~aL~FD 52 (101)
T 4ep8_B 13 IALNT-GRATCRVVVENH--GDR--PIQVGSHYHFAEVN-PALKFD 52 (101)
T ss_dssp EECST-TCCEEEEEEEEC--SSS--CEEEETTSCGGGSC-TTEESC
T ss_pred EEEcC-CCCEEEEEEEeC--CCc--ceEEccccChhHcC-cceeec
Confidence 46666 556788999999 988 77888888874322 336665
No 18
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=67.29 E-value=3.7 Score=30.37 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=28.2
Q ss_pred EEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEe
Q 024857 82 RITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 82 ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~ 128 (261)
.+.|.. +.=+++++|+|+ ||+ |++.|-|-.|-=.+ ..|.|+
T Consensus 18 ~I~lN~-gr~~~~l~V~Nt--GDR--PIQVGSHyHF~E~N-~aL~FD 58 (126)
T 4ubp_B 18 EIEINA-GREKTTIRVSNT--GDR--PIQVGSHIHFVEVN-KELLFD 58 (126)
T ss_dssp EEETTT-TSCEEEEEEEEC--SSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CEEeCC-CCcEEEEEEEeC--CCC--CEEEccccchhhcC-chhhcc
Confidence 356666 566788999999 988 77888887774322 235554
No 19
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=67.29 E-value=3.7 Score=30.37 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=28.2
Q ss_pred EEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEe
Q 024857 82 RITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 82 ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~ 128 (261)
.+.|.. +.=+++++|+|+ ||+ |++.|-|-.|-=.+ ..|.|+
T Consensus 18 ~I~lN~-gr~~~~l~V~Nt--GDR--PIQVGSHyHF~E~N-~aL~FD 58 (126)
T 4ac7_B 18 EIEINA-GREKTTIRVSNT--GDR--PIQVGSHIHFVEVN-KELLFD 58 (126)
T ss_dssp EEETTT-TSCEEEEEEEEC--SSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CEEeCC-CCcEEEEEEEeC--CCC--CEEEccccchhhcC-chhhcc
Confidence 356666 566788999999 988 77888887774322 235554
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.48 E-value=18 Score=26.52 Aligned_cols=32 Identities=9% Similarity=0.300 Sum_probs=24.6
Q ss_pred ceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEe
Q 024857 76 RYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFT 110 (261)
Q Consensus 76 ~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~ 110 (261)
...+++++.-.+ +.+.+.++|+|. ++++..+.
T Consensus 6 ~l~~~v~~~~~g-~~v~~~ltv~N~--s~~~v~l~ 37 (120)
T 3isy_A 6 EVVLSIDAIQEP-EQIKFNMSLKNQ--SERAIEFQ 37 (120)
T ss_dssp SEEEEEEEEECS-SCEEEEEEEEEC--SSSCEEEE
T ss_pred EEEEEEeeccCC-CeEEEEEEEEcC--CCCcEEEE
Confidence 455667777665 799999999999 88876654
No 21
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=42.85 E-value=11 Score=30.59 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=32.2
Q ss_pred cCCcceEE--EEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEe
Q 024857 72 IWPHRYEF--RLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 72 ~~P~~f~l--~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~ 128 (261)
.-|+.+.+ .=.+.|.. +.=+++++|+|+ |++ |++.|-|-.|-=.+ ..|.|+
T Consensus 105 ~~PGei~~~~~g~I~lN~-gr~~~~l~V~Nt--GDR--PIQVGSHyHF~E~N-~aL~FD 157 (225)
T 3qga_A 105 FKAGEIKFASDKDIELNA-GKEITELKVTNK--GPK--SLHVGSHFHFFEAN-RALEFD 157 (225)
T ss_dssp CCTTCEECSCSCCEETTT-TCCCEEEEEEEC--SSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CCCCeEeccCCCceecCC-CCceEEEEEEEC--CCC--ceeeccccchhhcC-chhhcc
Confidence 34666411 12366665 556788999999 998 77888887774322 235554
No 22
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=40.95 E-value=86 Score=26.05 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=29.4
Q ss_pred ceEEEEEecCChhhhccCCcceEEEEEEEEcC-CCeEEEEEEEEecCCCCeeEEEe
Q 024857 56 QACVDLILKHSEEEVKIWPHRYEFRLRITLGP-GGDLMLTSRIRNTNTDGKSFAFT 110 (261)
Q Consensus 56 ~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~-~~~L~i~~~v~N~n~~~~~~pf~ 110 (261)
...|+|+..... ...++.+|+|.. +=.+.++++|.|. +..++.+.
T Consensus 91 ~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~--s~~~~~~~ 136 (280)
T 3bs6_A 91 ELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNA--GEKPLEIS 136 (280)
T ss_dssp EEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECC--SSSCEEEE
T ss_pred eeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcC--CCCceeEe
Confidence 356777665321 367999999985 2357777777787 77755443
No 23
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=40.21 E-value=70 Score=24.78 Aligned_cols=44 Identities=14% Similarity=0.241 Sum_probs=32.6
Q ss_pred EEEEEEEc----CCCeEEEEEEEEecCCCCeeEEEe-eeeceeeecCCcce
Q 024857 79 FRLRITLG----PGGDLMLTSRIRNTNTDGKSFAFT-FAYHTYFAVSDISE 124 (261)
Q Consensus 79 l~~ty~L~----~~~~L~i~~~v~N~n~~~~~~pf~-~g~HpYF~v~~~~~ 124 (261)
+.+.|... ..+.+.+.++|+|+ +..+..++ +.+.=||.++....
T Consensus 13 l~Vqy~~~~~~~~~n~i~~~~~I~N~--g~~~i~Ls~lkiRYyft~d~~~~ 61 (170)
T 2wnx_A 13 ISVSYKCGVKDGTKNTIRATINIKNT--GTTPVNLSDIKVRYWFTSDGNEQ 61 (170)
T ss_dssp EEEEEEECCCCSSCCEEEEEEEEEEC--SSSCEEGGGEEEEEEECCTTCSC
T ss_pred EEEEEEeCCCCCCCCEEEEEEEEEEC--CCCceecCcEEEEEEEcCCCCce
Confidence 44555543 23789999999999 88877765 89999999976433
No 24
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=38.12 E-value=57 Score=25.01 Aligned_cols=35 Identities=9% Similarity=0.403 Sum_probs=28.2
Q ss_pred CeEEEEEEEEecCCCCeeEEEe-eeeceeeecCCccee
Q 024857 89 GDLMLTSRIRNTNTDGKSFAFT-FAYHTYFAVSDISEV 125 (261)
Q Consensus 89 ~~L~i~~~v~N~n~~~~~~pf~-~g~HpYF~v~~~~~l 125 (261)
+.+.+.++|+|+ +..+..++ +.++=||.++.....
T Consensus 24 n~i~~~~~I~N~--g~~~i~Ls~lkiRYyft~d~~~~~ 59 (160)
T 2xbt_A 24 NQIYMNMKLQNT--GSSTYDLSKITIRYFYTSDDDKAL 59 (160)
T ss_dssp SSEEEEEEEEEC--SSCCEEGGGEEEEEEECCSSCCCE
T ss_pred CEEEEEEEEEEC--CCCceecCcEEEEEEEeCCCCcee
Confidence 679999999999 88877665 899999999764433
No 25
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=37.82 E-value=13 Score=30.46 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=32.4
Q ss_pred cCCcceEEE-EEEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeeecCCcceeEEe
Q 024857 72 IWPHRYEFR-LRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 72 ~~P~~f~l~-~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~~~~l~~~ 128 (261)
.-|+.+... =.+.|.. +.=+++++|+|+ |++ |++.|-|-.|-=.+ ..|.|+
T Consensus 106 miPGei~~~~g~I~lN~-gr~~~~l~V~Nt--GDR--PIQVGSHyHF~E~N-~aL~FD 157 (238)
T 1e9y_A 106 LVPGELFLKNEDITINE-GKKAVSVKVKNV--GDR--PVQIGSHFHFFEVN-RCLDFD 157 (238)
T ss_dssp CCTTCEECCSCEEETTT-TCCCCEEEEEEC--SSS--CEEEETTSCGGGSC-TTEESC
T ss_pred CCCCeEEcCCCCeeeCC-CCCeEEEEEEeC--CCC--ceEeccccchHhcC-cccccc
Confidence 346654332 2366665 455788999999 998 77888888774322 235554
No 26
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=36.26 E-value=42 Score=29.47 Aligned_cols=28 Identities=7% Similarity=0.074 Sum_probs=23.3
Q ss_pred EEEEEEcCCCeEEEEEEEEecCCCCeeEEEe
Q 024857 80 RLRITLGPGGDLMLTSRIRNTNTDGKSFAFT 110 (261)
Q Consensus 80 ~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~ 110 (261)
..+|++-+ .+|+++++|+|. |+++..++
T Consensus 256 ~A~Y~vpg-R~l~~~~~VtN~--g~~pvrlg 283 (382)
T 1yew_A 256 DATYRVPG-RAMRMKLTITNH--GNSPIRLG 283 (382)
T ss_dssp EEEEESSC-SEEEEEEEEEEC--SSSCEEEE
T ss_pred ccEEecCC-cEEEEEEEEEcC--CCCceEee
Confidence 46788877 899999999999 99976544
No 27
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=33.95 E-value=2e+02 Score=27.62 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=39.1
Q ss_pred CceEEEEEecCChhhhccCCcceEEEEEEEEcCC-CeEEEEEEEEecCCCCeeEEEeeeeceeeecCC
Q 024857 55 SQACVDLILKHSEEEVKIWPHRYEFRLRITLGPG-GDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVSD 121 (261)
Q Consensus 55 ~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~~ 121 (261)
+..++++.|.+.. ..+++++.|++-++ ..++-..+|+|+ |++++.+.-..-..+.++.
T Consensus 129 ~~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~--g~~~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 129 EAETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENK--GGERLKLLRALSMSVDFPT 187 (729)
T ss_dssp GEEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEEC--SSSCEEEEEEEEEEEEESC
T ss_pred CceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEEC--CCCCEEEeEeeeecCcCCC
Confidence 3456677776421 35789999999542 567888999999 9887766554444455553
No 28
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=32.63 E-value=43 Score=29.75 Aligned_cols=28 Identities=7% Similarity=0.144 Sum_probs=23.0
Q ss_pred EEEEEEcCCCeEEEEEEEEecCCCCeeEEEe
Q 024857 80 RLRITLGPGGDLMLTSRIRNTNTDGKSFAFT 110 (261)
Q Consensus 80 ~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~ 110 (261)
..+|++-. .+|+++++|+|. |+++..++
T Consensus 290 ~A~Y~vpg-R~l~~~~~VtN~--g~~pvrlg 317 (419)
T 3rfr_A 290 GGVYKVPG-RELTINVKVKNG--TSQPVRLG 317 (419)
T ss_dssp EEEEESSS-SEEEEEEEEECC--SSSCBEEE
T ss_pred ceEEecCC-cEEEEEEEEecC--CCCceEEe
Confidence 36788877 899999999999 99977443
No 29
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=32.52 E-value=46 Score=21.49 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=13.5
Q ss_pred eEEEEEEEEcCCCeEEEEE
Q 024857 77 YEFRLRITLGPGGDLMLTS 95 (261)
Q Consensus 77 f~l~~ty~L~~~~~L~i~~ 95 (261)
|.-+++|+|.+ +.|.|.+
T Consensus 29 fagtvtytldg-ndleiri 46 (85)
T 2kl8_A 29 FAGTVTYTLDG-NDLEIRI 46 (85)
T ss_dssp TTCEEEEEECS-SCEEEEE
T ss_pred hcceEEEEecC-CeeEEEE
Confidence 44679999998 7777654
No 30
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=32.09 E-value=1.6e+02 Score=25.04 Aligned_cols=22 Identities=18% Similarity=0.463 Sum_probs=18.5
Q ss_pred CCEEeCCCCEEEEEEEEEEeec
Q 024857 224 KPIILKPGEEWRGRQEISAVPS 245 (261)
Q Consensus 224 ~~~~L~PGe~~~~~~~i~~~~~ 245 (261)
.++.++||++.+.++++.+.+.
T Consensus 267 ~~~~v~pg~~~~~~~~ly~GPK 288 (330)
T 3blc_A 267 QPVLVQPGQTGAMNSTLWVGPE 288 (330)
T ss_dssp CCEEECTTCEEEEEEEEEEEEC
T ss_pred CceeECCCCeeEEEEEEEeccC
Confidence 3688999999999999988664
No 31
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=31.34 E-value=1.1e+02 Score=23.07 Aligned_cols=48 Identities=13% Similarity=0.226 Sum_probs=35.4
Q ss_pred EEEEEEEcC----CCeEEEEEEEEecCCCCeeEEEe-eeeceeeecCCcceeEEe
Q 024857 79 FRLRITLGP----GGDLMLTSRIRNTNTDGKSFAFT-FAYHTYFAVSDISEVRVE 128 (261)
Q Consensus 79 l~~ty~L~~----~~~L~i~~~v~N~n~~~~~~pf~-~g~HpYF~v~~~~~l~~~ 128 (261)
|++.|+=.. .+.++..++|+|+ +..+.... +.+.=||..++..++.+.
T Consensus 3 l~vqy~~~~~~~~~n~i~~~~~I~N~--g~~~i~Ls~lkiRYyft~d~~~~~~~~ 55 (146)
T 3zqx_A 3 VKVQYLCENTQTSTQEIKGKFNIVNT--GNRDYSLKDIVLRYYFTKEHNSQLQFI 55 (146)
T ss_dssp EEEEEEESCCCSEESCEEEEEEEEEC--SSCCEEGGGEEEEEECCCCCCSCEEEE
T ss_pred EEEEEEcCCCCCCCCEEeEEEEEEEC--CCceEEcCcEEEEEEEecCCCccEEEE
Confidence 556666432 2579999999999 87777776 889999999865556554
No 32
>2ab9_A Pro-SFTI-1; protein, beta-sheet, random coil, hydrolase inhibitor; NMR {Helianthus annuus}
Probab=31.16 E-value=7.5 Score=20.49 Aligned_cols=7 Identities=14% Similarity=-0.197 Sum_probs=5.3
Q ss_pred cceEEcc
Q 024857 15 RIQSQFV 21 (261)
Q Consensus 15 G~PvlFP 21 (261)
=-|||||
T Consensus 21 ippicfp 27 (31)
T 2ab9_A 21 IPPICFP 27 (31)
T ss_dssp SSCSSSS
T ss_pred CCCcccC
Confidence 3478999
No 33
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=29.29 E-value=3.5e+02 Score=25.86 Aligned_cols=96 Identities=11% Similarity=0.169 Sum_probs=54.5
Q ss_pred cceEEcccccCCC--CC-----CCceeeecCCcEEecCCC--------CCCC---CCCCceEEEEEecCChhhhccCCcc
Q 024857 15 RIQSQFVEFANHG--SL-----EKHGFARSRVWSIDPDPP--------PFSA---NSSSQACVDLILKHSEEEVKIWPHR 76 (261)
Q Consensus 15 G~PvlFP~fg~~~--~~-----~~HGfar~~~W~v~~~~~--------~~~~---~~~~~~~v~l~l~~~~~~~~~~P~~ 76 (261)
.+|..+|-.|... .- ...| .+...|....... ++++ .+++..++++.|.+.. ..
T Consensus 72 ~~~~~~p~~g~~~~~~pa~~~~~~~g-~~~~~~~y~~~~~~~~k~~~~~lp~~~~~~~~~~~l~i~l~D~~-------~~ 143 (720)
T 2yfo_A 72 ALPQEYPSLGTGDYRNIALNIKNEKG-VESADLLFKSYEIRNGKYRLQGLPAVWADEKEAQTLEIVLADEN-------AQ 143 (720)
T ss_dssp TSCBSSCBTTSSCCSCCSEEEECTTS-CBCCCCEEEEEEEEESCCCBTTBCCCCCCTTTEEEEEEEEEETT-------TT
T ss_pred cchhhcccCCCCCCCCCeEEEEeCCC-CceeeeEEEeEEecCCcccccCCccccccCCCCcEEEEEEEECC-------CC
Confidence 3566888877632 10 1334 5555666554321 0110 1122445777776422 35
Q ss_pred eEEEEEEEEcCC-CeEEEEEEEEecCCCCeeEEEeeeeceeeecC
Q 024857 77 YEFRLRITLGPG-GDLMLTSRIRNTNTDGKSFAFTFAYHTYFAVS 120 (261)
Q Consensus 77 f~l~~ty~L~~~-~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~v~ 120 (261)
+++++.|++.++ +.++...+++|+ +++++.+.-..-.-+.++
T Consensus 144 l~v~l~y~~~~~~~vi~~~~~i~N~--g~~~~~l~~~~s~~l~~~ 186 (720)
T 2yfo_A 144 VEVHLLYGVLEENDVITRSVRIKNT--GTGQITIEKAAAACLDFV 186 (720)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEC--SSSCEEEEEEEEEEEEES
T ss_pred EEEEEEEEEECCCCEEEEEEEEEEC--CCCCEEEeeeecccccCC
Confidence 689999999752 578888999999 887765554433333444
No 34
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=25.56 E-value=3.5e+02 Score=26.04 Aligned_cols=48 Identities=6% Similarity=0.149 Sum_probs=33.1
Q ss_pred CceEEEEEecCChhhhccCCcceEEEEEEEEcCC-CeEEEEEEEEecCCCCeeEEEee
Q 024857 55 SQACVDLILKHSEEEVKIWPHRYEFRLRITLGPG-GDLMLTSRIRNTNTDGKSFAFTF 111 (261)
Q Consensus 55 ~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~n~~~~~~pf~~ 111 (261)
+..++++.|.+.. ..+++++.|++.++ +.++...+|+|. +++++-+.-
T Consensus 130 ~~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~--g~~~v~l~~ 178 (745)
T 3mi6_A 130 DAQTLVVSFNDRI-------TGLALDLNYSIFPHQDVIVKSAKFTNP--SSEKLVLNR 178 (745)
T ss_dssp CCEEEEEEEEETT-------TCCEEEEEEEEEGGGTEEEEEEEEECC--SSSCEEEEE
T ss_pred CCCEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEEC--CCCCEEeee
Confidence 3466777776432 35678888998653 567777889988 888766543
No 35
>2f49_C STE5 peptide, mitogen-activated protein kinase FUS3; protein-petide complex, transferase; 1.90A {Saccharomyces cerevisiae}
Probab=25.28 E-value=41 Score=17.93 Aligned_cols=22 Identities=5% Similarity=-0.139 Sum_probs=17.8
Q ss_pred cccCCCCCC-CCcceEEcccccC
Q 024857 4 NCFFLVARP-LLRIQSQFVEFAN 25 (261)
Q Consensus 4 ~~~~~~~~~-rgG~PvlFP~fg~ 25 (261)
...|+++++ |+|.-+.-|.-|+
T Consensus 6 qs~Y~~sP~~~~~m~L~~PP~~~ 28 (30)
T 2f49_C 6 QTIYSQAPSLNPNLILAAPPKER 28 (30)
T ss_pred hhhhhcCcccCCCceEeCCCccc
Confidence 456889888 8999998887765
No 36
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=24.83 E-value=50 Score=32.44 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=25.7
Q ss_pred EEEEcCCCeEEEEEEEEecCCCCeeEEEeeeeceeee
Q 024857 82 RITLGPGGDLMLTSRIRNTNTDGKSFAFTFAYHTYFA 118 (261)
Q Consensus 82 ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~HpYF~ 118 (261)
.+.|.. +.=+++++|+|+ +++ |++.|-|-.|-
T Consensus 143 ~~~~~~-~~~~~~~~v~~~--~~r--~~~v~sh~hf~ 174 (840)
T 4gy7_A 143 CLTLNI-GRKAVILKVTSK--GDR--PIQVGSHYHFI 174 (840)
T ss_dssp EEECSC-SCEEEEEEEEEC--CSS--CEEEETTSCGG
T ss_pred ceEecC-CCceEEEEEEeC--CCC--ceEeccccchh
Confidence 567776 677899999999 998 67788887773
No 37
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=23.31 E-value=1.3e+02 Score=28.63 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=28.0
Q ss_pred CcceEEEEEEEEcCCCeEEEEEEEEecCCCCeeEEEeeee
Q 024857 74 PHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFAFTFAY 113 (261)
Q Consensus 74 P~~f~l~~ty~L~~~~~L~i~~~v~N~n~~~~~~pf~~g~ 113 (261)
++...++-+|+|.. ++|.+.|+++|. ++.++-|.+=+
T Consensus 540 ~~~~~l~K~~~~~~-~~~~v~y~~~~~--~~~~~~~~~E~ 576 (659)
T 1k1x_A 540 KIPARVEKKIELTE-DGFIAKYRVLLE--KPYKALFGVEI 576 (659)
T ss_dssp EEEEEEEEEEEEET-TEEEEEEEEEES--SCCCEEEEEEE
T ss_pred CcceEEEEEEEEcC-CEEEEEEEEeeC--CCCceEEEEEE
Confidence 44678888999998 899999999998 66444444333
No 38
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=22.50 E-value=1.5e+02 Score=22.46 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=27.0
Q ss_pred CeEEEEEEEEecCCCCeeEEEe-eeeceeeecCCc
Q 024857 89 GDLMLTSRIRNTNTDGKSFAFT-FAYHTYFAVSDI 122 (261)
Q Consensus 89 ~~L~i~~~v~N~n~~~~~~pf~-~g~HpYF~v~~~ 122 (261)
+.+.+.++|+|+ +..+...+ +.++=||.++..
T Consensus 20 n~i~~~~~I~N~--g~~~i~Ls~l~iRYyft~d~~ 52 (160)
T 1g43_A 20 NSIYARFKVTNT--SGSPINLADLKLRYYYTQDAD 52 (160)
T ss_dssp SCEEEEEEEEEC--SSSCEEGGGEEEEEEECCSSC
T ss_pred CEEEEEEEEEEC--CCCCcccCcEEEEEEEecCCC
Confidence 679999999999 88877765 899999999754
No 39
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=22.36 E-value=1.3e+02 Score=22.79 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=29.3
Q ss_pred CeEEEEEEEEecCCCCeeEEEe-eeeceeeecCCcceeEE
Q 024857 89 GDLMLTSRIRNTNTDGKSFAFT-FAYHTYFAVSDISEVRV 127 (261)
Q Consensus 89 ~~L~i~~~v~N~n~~~~~~pf~-~g~HpYF~v~~~~~l~~ 127 (261)
+.+...++|+|+ |..++.++ +.+.-||.......+.+
T Consensus 20 n~I~~~~~I~Nt--g~~~i~Ls~vkiRYyfT~dg~~~~~~ 57 (153)
T 3zuc_A 20 NSIYPKFRLTNT--GSNAINLADVKLHYYFTVDGDKAQTF 57 (153)
T ss_dssp SCBCEEEEEEEC--SSSCEEGGGCEEEEEECCSSCCCEEE
T ss_pred CEEeeEEEEEEC--CCCcEEccceEEEEEEecCCCceeEE
Confidence 678999999999 98888887 88899998865444433
Done!