Query 024862
Match_columns 261
No_of_seqs 156 out of 1303
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 07:58:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0819 Annexin [Intracellular 100.0 7E-70 1.5E-74 473.6 24.0 241 1-258 19-267 (321)
2 KOG0819 Annexin [Intracellular 100.0 1.2E-45 2.7E-50 321.7 18.5 213 1-235 91-319 (321)
3 PF00191 Annexin: Annexin; In 99.7 4.5E-18 9.7E-23 118.3 7.2 66 82-147 1-66 (66)
4 PF00191 Annexin: Annexin; In 99.6 3.6E-16 7.8E-21 108.6 6.8 64 2-75 1-66 (66)
5 smart00335 ANX Annexin repeats 99.5 9.6E-14 2.1E-18 92.2 5.6 53 95-147 1-53 (53)
6 smart00335 ANX Annexin repeats 99.3 5.3E-12 1.2E-16 83.7 5.3 51 15-75 1-53 (53)
7 PF14003 YlbE: YlbE-like prote 54.3 24 0.00052 24.1 3.7 44 105-148 17-61 (65)
8 COG5126 FRQ1 Ca2+-binding prot 37.4 1.2E+02 0.0026 24.7 6.0 85 24-120 10-101 (160)
9 PF14003 YlbE: YlbE-like prote 37.0 43 0.00094 22.9 2.8 34 187-221 13-46 (65)
10 PF08587 UBA_2: Ubiquitin asso 36.5 11 0.00023 24.0 -0.2 33 5-40 7-40 (46)
11 KOG0031 Myosin regulatory ligh 31.3 2.9E+02 0.0063 22.5 8.0 18 23-40 21-38 (171)
12 KOG1567 Ribonucleotide reducta 29.5 4.2E+02 0.0091 23.8 9.3 88 153-260 91-195 (344)
13 smart00717 SANT SANT SWI3, AD 28.0 1.3E+02 0.0029 17.6 4.3 35 2-36 7-42 (49)
14 COG5118 BDP1 Transcription ini 27.2 1.3E+02 0.0028 28.0 5.0 41 81-124 370-410 (507)
15 PF00249 Myb_DNA-binding: Myb- 26.6 1.6E+02 0.0035 18.1 4.8 34 2-35 7-42 (48)
16 KOG4368 Predicted RNA binding 25.6 97 0.0021 30.5 4.1 49 210-258 193-241 (757)
17 PF01986 DUF123: Domain of unk 25.5 45 0.00097 24.8 1.5 23 237-260 68-90 (99)
18 cd00167 SANT 'SWI3, ADA2, N-Co 24.9 1.5E+02 0.0032 17.1 4.3 34 2-35 5-39 (45)
19 PF12645 HTH_16: Helix-turn-he 23.5 1.9E+02 0.0041 19.6 4.2 25 6-33 3-27 (65)
20 PF08811 DUF1800: Protein of u 22.6 91 0.002 29.7 3.4 116 129-249 133-280 (462)
21 PF08085 Entericidin: Enterici 22.4 29 0.00064 18.2 0.0 7 249-255 1-7 (21)
22 PF13921 Myb_DNA-bind_6: Myb-l 21.5 1.2E+02 0.0026 19.5 2.9 34 2-35 4-37 (60)
23 COG5118 BDP1 Transcription ini 21.3 92 0.002 28.9 2.9 36 2-40 371-406 (507)
24 PF13758 Prefoldin_3: Prefoldi 20.9 2.2E+02 0.0048 21.2 4.4 34 3-36 34-72 (99)
25 KOG0859 Synaptobrevin/VAMP-lik 20.1 3.6E+02 0.0078 22.8 5.9 69 108-176 75-143 (217)
No 1
>KOG0819 consensus Annexin [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7e-70 Score=473.59 Aligned_cols=241 Identities=35% Similarity=0.547 Sum_probs=234.9
Q ss_pred ChHHHHHHHhhcCCCCCHHHHHHHhcCCCHHHHHHHHHHh-cccccchHHhhhchhHHHHHHHhhhc-chHHHHHHHhcC
Q 024862 1 MAEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG-GFFAEDERRFERWNDHHVKLLKHEFM-RFKNAVVLWAMH 78 (261)
Q Consensus 1 ~~Da~~L~~A~~g~gtde~~li~Il~~rs~~q~~~i~~~Y-~~~~~~~~~~~~~~~~L~~~l~~e~s-~~~~~l~~l~~~ 78 (261)
..||+.|++||+|+||||++||+||++|||+|||.|+++| ..||++ |.++|++||| +|++++++|+.+
T Consensus 19 ~~DAe~L~kA~kG~Gtde~aII~iL~~Rsn~QRq~I~~ayk~~ygkD----------Li~~Lk~ELsG~Fe~~i~al~~~ 88 (321)
T KOG0819|consen 19 VQDAEQLRKAMKGFGTDEQAIIDILTHRSNAQRQLIRAAYKTMYGKD----------LIKDLKSELSGDFERAIVALMKP 88 (321)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHccCHHHHHHHHHHHHHHHhHH----------HHHHHHHHhCccHHHHHHHHcCC
Confidence 3799999999999999999999999999999999999999 999998 9999999999 999999999999
Q ss_pred chHHHHHHHHHhhhcCCCCHHHHHHHHhcCCHHHHHHHHHHhhhhcCccHHHHHhhccCCcHHHHHHHHHHhhhhCCCCC
Q 024862 79 PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKV 158 (261)
Q Consensus 79 p~~~dA~~L~~A~~g~gtde~~li~Il~~rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~ll~~~r~e~~~v 158 (261)
|+++||+.|++||+|.|||+++||||+|+|||.|+++|+++|+..|++||++||.+++||+|+++|+.|++|.|+|+..|
T Consensus 89 p~~~DA~~l~~amkg~gtde~vlIEIlcTRT~~el~~i~~aY~~~y~~sLEeDI~s~TSG~frklLv~L~~~~R~e~~~v 168 (321)
T KOG0819|consen 89 PAEYDAKELKKAMKGLGTDEKVLIEILCTRTNEELRAIRQAYQELYKKSLEEDIASDTSGDFRKLLVSLVQGNRDEGDRV 168 (321)
T ss_pred HHHhHHHHHHHHHhccCcchhhheeeeccCCHHHHHHHHHHHHHHHcccHHHHhhhccCchHHHHHHHHHhcCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred ChhHHHHHHHHHHHhhhccccCCCCChhhHHHHhhcCCHHHHHHHHHHHHHHhCccHHHHhhcc------hHHHHHHHhh
Q 024862 159 KEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDELDVH------LILQAAVQCL 232 (261)
Q Consensus 159 ~~~~~~~da~~L~~a~~~~~~~~~~d~~~li~Il~~rs~~~L~~I~~~Y~~~yg~~L~~~I~~e------~~l~~ll~~~ 232 (261)
|...+.+||+.|++|++.+ |++|+..|++||++||.+||++++++|++.+|++|++.|++| .+|+++++|+
T Consensus 169 d~~la~~dA~~L~~Age~k---~gtde~~~~~Il~tRs~~qL~~vf~~y~~~~g~diek~I~~e~~gd~~~~llaiv~c~ 245 (321)
T KOG0819|consen 169 DDALAKQDAQDLYEAGEKK---WGTDEDKFIRILTTRSKAQLRLVFEEYQRISGKDIEKSIKEEFSGDFEKLLLAIVKCI 245 (321)
T ss_pred CHHHHHHHHHHHHHHhhhh---ccCcHHHHHHHHHhCCHHHHHHHHHHHHHhcchhHHHHHhhccCchHHHHHHHHHHHH
Confidence 9999999999999999974 789999999999999999999999999999999999999986 6889999999
Q ss_pred cCchhhHHHHHhHhhhhhcccccCCC
Q 024862 233 ITPQSYFSRVSLHFFFNSVIGVFIYG 258 (261)
Q Consensus 233 ~~~~~~~A~~L~~a~~~~~~g~g~~~ 258 (261)
+|||.|||++||.|| +|+||.|
T Consensus 246 ~n~~~yFA~~L~~am----kg~GTdd 267 (321)
T KOG0819|consen 246 RNPPAYFAERLRKAM----KGLGTDD 267 (321)
T ss_pred cCHHHHHHHHHHHHH----hccCCCc
Confidence 999999999999777 9999987
No 2
>KOG0819 consensus Annexin [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-45 Score=321.74 Aligned_cols=213 Identities=23% Similarity=0.283 Sum_probs=201.4
Q ss_pred ChHHHHHHHhhcCCCCCHHHHHHHhcCCCHHHHHHHHHHh-cccccchHHhhhchhHHHHHHHhhhc-chHHHHHHHhcC
Q 024862 1 MAEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG-GFFAEDERRFERWNDHHVKLLKHEFM-RFKNAVVLWAMH 78 (261)
Q Consensus 1 ~~Da~~L~~A~~g~gtde~~li~Il~~rs~~q~~~i~~~Y-~~~~~~~~~~~~~~~~L~~~l~~e~s-~~~~~l~~l~~~ 78 (261)
+.||..|++||||+||||.+||||+|+|||.|+++|+++| ..|+++ |++||.+++| +|+++|+.++++
T Consensus 91 ~~DA~~l~~amkg~gtde~vlIEIlcTRT~~el~~i~~aY~~~y~~s----------LEeDI~s~TSG~frklLv~L~~~ 160 (321)
T KOG0819|consen 91 EYDAKELKKAMKGLGTDEKVLIEILCTRTNEELRAIRQAYQELYKKS----------LEEDIASDTSGDFRKLLVSLVQG 160 (321)
T ss_pred HhHHHHHHHHHhccCcchhhheeeeccCCHHHHHHHHHHHHHHHccc----------HHHHhhhccCchHHHHHHHHHhc
Confidence 3699999999999999999999999999999999999999 999999 9999999999 999999999864
Q ss_pred -----------chHHHHHHHHHhhhc-CCCCHHHHHHHHhcCCHHHHHHHHHHhhhhcCccHHHHHhhccCCcHHHHHHH
Q 024862 79 -----------PWERDARLIKEALKK-GPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVA 146 (261)
Q Consensus 79 -----------p~~~dA~~L~~A~~g-~gtde~~li~Il~~rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~ 146 (261)
.+..||+.|++|... +|||+..++.||++||..|++.+++.|+..+|+++++.|+.+++|+|+++|++
T Consensus 161 ~R~e~~~vd~~la~~dA~~L~~Age~k~gtde~~~~~Il~tRs~~qL~~vf~~y~~~~g~diek~I~~e~~gd~~~~lla 240 (321)
T KOG0819|consen 161 NRDEGDRVDDALAKQDAQDLYEAGEKKWGTDEDKFIRILTTRSKAQLRLVFEEYQRISGKDIEKSIKEEFSGDFEKLLLA 240 (321)
T ss_pred CCccCCCcCHHHHHHHHHHHHHHhhhhccCcHHHHHHHHHhCCHHHHHHHHHHHHHhcchhHHHHHhhccCchHHHHHHH
Confidence 278999999999865 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhCCCCCChhHHHHHHHHHHHhhhccccCCCCChhhHHHHhhcCCHHHHHHHHHHHHHHhCccHHHHhhcc--hH
Q 024862 147 LVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDELDVH--LI 224 (261)
Q Consensus 147 ll~~~r~e~~~v~~~~~~~da~~L~~a~~~~~~~~~~d~~~li~Il~~rs~~~L~~I~~~Y~~~yg~~L~~~I~~e--~~ 224 (261)
+++|.| +++.++|..||.||+|.| ||+.++|||+++||+.+|..|+.+|+++||++|.++|+++ +.
T Consensus 241 iv~c~~--------n~~~yFA~~L~~amkg~G----Tdd~~LiRI~VsRsEiDl~~Ik~ef~~~Y~ksL~~~I~~dtsGd 308 (321)
T KOG0819|consen 241 IVKCIR--------NPPAYFAERLRKAMKGLG----TDDKTLIRIVVSRSEIDLLDIKEEFQRKYGKSLYSAIKGDTSGD 308 (321)
T ss_pred HHHHHc--------CHHHHHHHHHHHHHhccC----CCccceeeeeeeHHHhhHHHHHHHHHHHhCccHHHHHhhhccch
Confidence 999988 799999999999999975 7999999999999999999999999999999999999998 77
Q ss_pred HHHHHHhhcCc
Q 024862 225 LQAAVQCLITP 235 (261)
Q Consensus 225 l~~ll~~~~~~ 235 (261)
++.+|..++.+
T Consensus 309 Y~~~LlaL~g~ 319 (321)
T KOG0819|consen 309 YKKALLALLGG 319 (321)
T ss_pred HHHHHHHHhCC
Confidence 87777766643
No 3
>PF00191 Annexin: Annexin; InterPro: IPR018502 The annexins (or lipocortins) are a family of proteins that bind to phospholipids in a calcium-dependent manner []. They are distributed ubiquitously in different tissues and cell types of higher and lower eukaryotes, including mammals, fish, birds, Drosophila melanogaster (Fruit fly), Xenopus laevis (African clawed frog), Caenorhabditis elegans , Dictyostelium discoideum (Slime mold) and Neurospora crassa [, ]. Annexins are absent from yeasts and prokaryotes []. The plant annexins are somewhat distinct from those found in other taxa []. Most eukaryotic species have 1-20 annexin (ANX) genes. All annexins share a core domain made up of four similar repeats, each approximately 70 amino acids long []. Each individual annexin repeat (sometimes referred to as endonexin folds) is folded into five alpha-helices, and in turn are wound into a right-handed super-helix; they usually contain a characteristic 'type 2' motif for binding calcium ions with the sequence 'GxGT-[38 residues]-D/E'. Animal and fungal annexins also have variable amino-terminal domains. The core domains of most vertebrate annexins have been analysed by X-ray crystallography, revealing conservation of their secondary and tertiary structures despite only 45-55% amino-acid identity among individual members. The four repeats pack into a structure that resembles a flattened disc, with a slightly convex surface on which the Ca 2+ -binding loops are located and a concave surface at which the amino and carboxyl termini come into close apposition. Annexins are traditionally thought of as calcium-dependent phospholipid-binding proteins, but recent work suggests a more complex set of functions. The famiy has been linked with inhibition of phospholipase activity, exocytosis and endoctyosis, signal transduction, organisation of the extracellular matrix, resistance to reactive oxygen species and DNA replication [].; GO: 0005509 calcium ion binding, 0005544 calcium-dependent phospholipid binding; PDB: 1N44_A 1BC1_A 2IE6_A 2H0M_A 1A8B_A 2H0K_A 1BCW_A 1BCZ_A 1N42_A 1BC0_A ....
Probab=99.74 E-value=4.5e-18 Score=118.31 Aligned_cols=66 Identities=36% Similarity=0.537 Sum_probs=63.4
Q ss_pred HHHHHHHHhhhcCCCCHHHHHHHHhcCCHHHHHHHHHHhhhhcCccHHHHHhhccCCcHHHHHHHH
Q 024862 82 RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVAL 147 (261)
Q Consensus 82 ~dA~~L~~A~~g~gtde~~li~Il~~rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l 147 (261)
+||+.|++|++|+|+|+..+++||++||+.|++.|+++|+..||++|.++|++++||+|+++|++|
T Consensus 1 ~DA~~l~~a~~~~g~de~~li~Il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~e~sGd~~~~Ll~l 66 (66)
T PF00191_consen 1 YDAELLHAALKGWGTDEDVLIEILCTRSPAQLRAIKQAYKKKYGKDLEEDIKKETSGDFEKLLLAL 66 (66)
T ss_dssp HHHHHHHHHHSSSSSTHHHHHHHHHHSTHHHHHHHHHHHHHHHSS-HHHHHHHHSTHHHHHHHHHH
T ss_pred CHHHHHHHHccCCCCChhHhhhHHhhhcccccceeehhhhhhhHHHHHHHHHHhCCHHHHHHHHhC
Confidence 589999999999999999999999999999999999999999999999999999999999999886
No 4
>PF00191 Annexin: Annexin; InterPro: IPR018502 The annexins (or lipocortins) are a family of proteins that bind to phospholipids in a calcium-dependent manner []. They are distributed ubiquitously in different tissues and cell types of higher and lower eukaryotes, including mammals, fish, birds, Drosophila melanogaster (Fruit fly), Xenopus laevis (African clawed frog), Caenorhabditis elegans , Dictyostelium discoideum (Slime mold) and Neurospora crassa [, ]. Annexins are absent from yeasts and prokaryotes []. The plant annexins are somewhat distinct from those found in other taxa []. Most eukaryotic species have 1-20 annexin (ANX) genes. All annexins share a core domain made up of four similar repeats, each approximately 70 amino acids long []. Each individual annexin repeat (sometimes referred to as endonexin folds) is folded into five alpha-helices, and in turn are wound into a right-handed super-helix; they usually contain a characteristic 'type 2' motif for binding calcium ions with the sequence 'GxGT-[38 residues]-D/E'. Animal and fungal annexins also have variable amino-terminal domains. The core domains of most vertebrate annexins have been analysed by X-ray crystallography, revealing conservation of their secondary and tertiary structures despite only 45-55% amino-acid identity among individual members. The four repeats pack into a structure that resembles a flattened disc, with a slightly convex surface on which the Ca 2+ -binding loops are located and a concave surface at which the amino and carboxyl termini come into close apposition. Annexins are traditionally thought of as calcium-dependent phospholipid-binding proteins, but recent work suggests a more complex set of functions. The famiy has been linked with inhibition of phospholipase activity, exocytosis and endoctyosis, signal transduction, organisation of the extracellular matrix, resistance to reactive oxygen species and DNA replication [].; GO: 0005509 calcium ion binding, 0005544 calcium-dependent phospholipid binding; PDB: 1N44_A 1BC1_A 2IE6_A 2H0M_A 1A8B_A 2H0K_A 1BCW_A 1BCZ_A 1N42_A 1BC0_A ....
Probab=99.65 E-value=3.6e-16 Score=108.65 Aligned_cols=64 Identities=25% Similarity=0.364 Sum_probs=61.2
Q ss_pred hHHHHHHHhhcCCCCCHHHHHHHhcCCCHHHHHHHHHHh-cccccchHHhhhchhHHHHHHHhhhc-chHHHHHHH
Q 024862 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG-GFFAEDERRFERWNDHHVKLLKHEFM-RFKNAVVLW 75 (261)
Q Consensus 2 ~Da~~L~~A~~g~gtde~~li~Il~~rs~~q~~~i~~~Y-~~~~~~~~~~~~~~~~L~~~l~~e~s-~~~~~l~~l 75 (261)
+||+.|++|++|+|+|+..|++||++||+.|+++|+++| ..||++ |.++|++++| +|++++++|
T Consensus 1 ~DA~~l~~a~~~~g~de~~li~Il~~rs~~ql~~i~~~Y~~~~g~~----------L~~~i~~e~sGd~~~~Ll~l 66 (66)
T PF00191_consen 1 YDAELLHAALKGWGTDEDVLIEILCTRSPAQLRAIKQAYKKKYGKD----------LEEDIKKETSGDFEKLLLAL 66 (66)
T ss_dssp HHHHHHHHHHSSSSSTHHHHHHHHHHSTHHHHHHHHHHHHHHHSS-----------HHHHHHHHSTHHHHHHHHHH
T ss_pred CHHHHHHHHccCCCCChhHhhhHHhhhcccccceeehhhhhhhHHH----------HHHHHHHhCCHHHHHHHHhC
Confidence 599999999999999999999999999999999999999 999999 9999999999 999999875
No 5
>smart00335 ANX Annexin repeats.
Probab=99.47 E-value=9.6e-14 Score=92.20 Aligned_cols=53 Identities=30% Similarity=0.548 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHhcCCHHHHHHHHHHhhhhcCccHHHHHhhccCCcHHHHHHHH
Q 024862 95 PNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVAL 147 (261)
Q Consensus 95 gtde~~li~Il~~rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l 147 (261)
|||+..|++|+++||+.|++.|+++|+..||++|.++|++++||+|++++++|
T Consensus 1 gtde~~l~~il~~rs~~~~~~i~~~Y~~~~~~~L~~~i~~e~sG~~~~~l~~l 53 (53)
T smart00335 1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53 (53)
T ss_pred CCCHHHHHHHHHcCCHHHHHHHHHHHHHHhCccHHHHHHHhcChHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999998874
No 6
>smart00335 ANX Annexin repeats.
Probab=99.29 E-value=5.3e-12 Score=83.74 Aligned_cols=51 Identities=27% Similarity=0.363 Sum_probs=48.9
Q ss_pred CCCHHHHHHHhcCCCHHHHHHHHHHh-cccccchHHhhhchhHHHHHHHhhhc-chHHHHHHH
Q 024862 15 GVDEKTVISILGNSQPEHRQAFRKEG-GFFAEDERRFERWNDHHVKLLKHEFM-RFKNAVVLW 75 (261)
Q Consensus 15 gtde~~li~Il~~rs~~q~~~i~~~Y-~~~~~~~~~~~~~~~~L~~~l~~e~s-~~~~~l~~l 75 (261)
||||..|++|+++||+.||+.|+.+| ..||++ |.++|++++| +|++++++|
T Consensus 1 gtde~~l~~il~~rs~~~~~~i~~~Y~~~~~~~----------L~~~i~~e~sG~~~~~l~~l 53 (53)
T smart00335 1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKD----------LEDDIKSETSGDFEKLLLAL 53 (53)
T ss_pred CCCHHHHHHHHHcCCHHHHHHHHHHHHHHhCcc----------HHHHHHHhcChHHHHHHHhC
Confidence 79999999999999999999999999 999999 9999999999 999998865
No 7
>PF14003 YlbE: YlbE-like protein
Probab=54.31 E-value=24 Score=24.13 Aligned_cols=44 Identities=14% Similarity=0.283 Sum_probs=33.5
Q ss_pred HhcCCHHHHHHHHHHhhhhcCccHHHHHhhccCC-cHHHHHHHHH
Q 024862 105 ASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG-KEKKLLVALV 148 (261)
Q Consensus 105 l~~rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG-~~~~~ll~ll 148 (261)
..+|.|.++...-.++..-|++++-+.|..-..+ .+..+++.++
T Consensus 17 ~LsR~P~~l~~fe~~a~~~y~kT~p~rVek~~n~lqMa~MM~~M~ 61 (65)
T PF14003_consen 17 ILSRNPEELEAFEKEAKHFYKKTIPHRVEKFSNQLQMASMMMEMF 61 (65)
T ss_pred HHccCHHHHHHHHHHHHHHHhccccHHHHHHHhHHHHHHHHHHHH
Confidence 3489999999999999999999999999865443 3444444444
No 8
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=37.37 E-value=1.2e+02 Score=24.66 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=49.8
Q ss_pred HhcCCCHHHHHHHHHHhcccccchHHhhhchhHHHHHHHhhhcchHHHHHHHhcCchHHHHHHHHHhhhc--CCCCHHHH
Q 024862 24 ILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKNAVVLWAMHPWERDARLIKEALKK--GPNSNSVI 101 (261)
Q Consensus 24 Il~~rs~~q~~~i~~~Y~~~~~~~~~~~~~~~~L~~~l~~e~s~~~~~l~~l~~~p~~~dA~~L~~A~~g--~gtde~~l 101 (261)
..+.-+.+|+++++++|.++.++ =...|... .+.+++-.+=.+|....+..|-+.+.. ...|...+
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d----------~~G~I~~~--el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~F 77 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRD----------SDGLIDRN--ELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEF 77 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcC----------CCCCCcHH--HHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHH
Confidence 34556899999999999545442 00111100 455555555567788888888888774 22466655
Q ss_pred HHHHhcCC-----HHHHHHHHHHh
Q 024862 102 VEIASTRS-----SDELLGARKAY 120 (261)
Q Consensus 102 i~Il~~rs-----~~~l~~i~~~Y 120 (261)
+.++...+ +.+++..++.|
T Consensus 78 l~~ms~~~~~~~~~Eel~~aF~~f 101 (160)
T COG5126 78 LTVMSVKLKRGDKEEELREAFKLF 101 (160)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHh
Confidence 55554322 45555555555
No 9
>PF14003 YlbE: YlbE-like protein
Probab=36.98 E-value=43 Score=22.90 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=29.2
Q ss_pred hHHHHhhcCCHHHHHHHHHHHHHHhCccHHHHhhc
Q 024862 187 EVVRILSTRSKPHLKSVFKHYKEIAGQHFEDELDV 221 (261)
Q Consensus 187 ~li~Il~~rs~~~L~~I~~~Y~~~yg~~L~~~I~~ 221 (261)
.|.++| +|.|.++.+.-.++...||+++-+.|+.
T Consensus 13 ~WYR~L-sR~P~~l~~fe~~a~~~y~kT~p~rVek 46 (65)
T PF14003_consen 13 IWYRIL-SRNPEELEAFEKEAKHFYKKTIPHRVEK 46 (65)
T ss_pred HHHHHH-ccCHHHHHHHHHHHHHHHhccccHHHHH
Confidence 455666 5689999999999999999999999886
No 10
>PF08587 UBA_2: Ubiquitin associated domain (UBA) ; InterPro: IPR013896 This is a UBA (ubiquitin associated) protein []. Ubiquitin is involved in intracellular proteolysis. ; GO: 0004674 protein serine/threonine kinase activity; PDB: 3H4J_B.
Probab=36.53 E-value=11 Score=23.99 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=19.1
Q ss_pred HHHHHhhcCCCCCHHHHHHHhcCCCH-HHHHHHHHHh
Q 024862 5 EALIKAFSGHGVDEKTVISILGNSQP-EHRQAFRKEG 40 (261)
Q Consensus 5 ~~L~~A~~g~gtde~~li~Il~~rs~-~q~~~i~~~Y 40 (261)
..|-++| |-+.+-|.+.|-+..+ +|-.+|+.+|
T Consensus 7 ~~Ls~tM---GY~kdeI~eaL~~~~~~~~~neIkDAY 40 (46)
T PF08587_consen 7 SKLSKTM---GYDKDEIYEALESSEPSPQSNEIKDAY 40 (46)
T ss_dssp HHHHCTT------HHHHHHHCCSSS------SSCCHH
T ss_pred HHHHHHh---CCCHHHHHHHHHcCCCcchHHHHHHHH
Confidence 3444555 7899999999988765 7888888888
No 11
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=31.32 E-value=2.9e+02 Score=22.51 Aligned_cols=18 Identities=11% Similarity=0.180 Sum_probs=14.1
Q ss_pred HHhcCCCHHHHHHHHHHh
Q 024862 23 SILGNSQPEHRQAFRKEG 40 (261)
Q Consensus 23 ~Il~~rs~~q~~~i~~~Y 40 (261)
.+..--+..|+|+.+++|
T Consensus 21 nvFamf~q~QIqEfKEAF 38 (171)
T KOG0031|consen 21 NVFAMFDQSQIQEFKEAF 38 (171)
T ss_pred hHHHHhhHHHHHHHHHHH
Confidence 344555889999999999
No 12
>KOG1567 consensus Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism]
Probab=29.50 E-value=4.2e+02 Score=23.83 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=51.7
Q ss_pred hCCCCCChhHHHHHHHHHHHhhhccccCCCCChhhHHHHhhcCCHHHHHHHHHHHHHHhCccHHHHhhcc----hHHHH-
Q 024862 153 YEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDELDVH----LILQA- 227 (261)
Q Consensus 153 ~e~~~v~~~~~~~da~~L~~a~~~~~~~~~~d~~~li~Il~~rs~~~L~~I~~~Y~~~yg~~L~~~I~~e----~~l~~- 227 (261)
..++.|+.++++.+...+.-.... .+.. -| -+|-..+.++|..-|+.-|+.. -.+.+
T Consensus 91 asdGivnenl~Erfs~evqv~ear----------~fyg-------fq-IaiENIHSEmYSlLidtyIrD~ker~~LFnAI 152 (344)
T KOG1567|consen 91 ASDGIVNENLVERFSQEVQVPEAR----------CFYG-------FQ-IAIENIHSEMYSLLIDTYIRDPKEREFLFNAI 152 (344)
T ss_pred ccccchhHHHHHHHHHHhhccccc----------chhh-------hH-HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHH
Confidence 445677778887777665433221 1110 01 1244445566666666666652 11111
Q ss_pred ------------HHHhhcCchhhHHHHHhHhhhhhcccccCCCcC
Q 024862 228 ------------AVQCLITPQSYFSRVSLHFFFNSVIGVFIYGCF 260 (261)
Q Consensus 228 ------------ll~~~~~~~~~~A~~L~~a~~~~~~g~g~~~~~ 260 (261)
.++-+.|+..-||++|- || +++.|+.-.|-|
T Consensus 153 ~t~p~vk~KAdWalrWI~d~~s~faeRlv-AF-AavEGIFFSgsF 195 (344)
T KOG1567|consen 153 ETIPEVKKKADWALRWISDKDSLFAERLV-AF-AAVEGIFFSGSF 195 (344)
T ss_pred HhhHHHHHHHHHHHHHhcCCCccHHHHHH-HH-HHHhhhhcccch
Confidence 35557788898999998 77 888999877754
No 13
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=27.97 E-value=1.3e+02 Score=17.58 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=27.6
Q ss_pred hHHHHHHHhhcCCC-CCHHHHHHHhcCCCHHHHHHH
Q 024862 2 AEIEALIKAFSGHG-VDEKTVISILGNSQPEHRQAF 36 (261)
Q Consensus 2 ~Da~~L~~A~~g~g-tde~~li~Il~~rs~~q~~~i 36 (261)
.|-..|..++...| .+=..|.+.+.+||+.|...-
T Consensus 7 ~E~~~l~~~~~~~g~~~w~~Ia~~~~~rt~~~~~~~ 42 (49)
T smart00717 7 EEDELLIELVKKYGKNNWEKIAKELPGRTAEQCRER 42 (49)
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHHcCCCCHHHHHHH
Confidence 45677888888888 777889999999999877553
No 14
>COG5118 BDP1 Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
Probab=27.20 E-value=1.3e+02 Score=27.95 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHhcCCHHHHHHHHHHhhhhc
Q 024862 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLF 124 (261)
Q Consensus 81 ~~dA~~L~~A~~g~gtde~~li~Il~~rs~~~l~~i~~~Y~~~y 124 (261)
..+.+..|+|+.-||||-..+-.++-+|+..| |+-.|.+.-
T Consensus 370 ~~e~ekFYKALs~wGtdF~LIs~lfP~R~Rkq---IKaKfi~Ee 410 (507)
T COG5118 370 KKEIEKFYKALSIWGTDFSLISSLFPNRERKQ---IKAKFIKEE 410 (507)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHhcCchhHHH---HHHHHHHHh
Confidence 45677889999999999999999998777544 555555433
No 15
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=26.61 E-value=1.6e+02 Score=18.08 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=28.2
Q ss_pred hHHHHHHHhhcCCCCC-HHHHHHHhc-CCCHHHHHH
Q 024862 2 AEIEALIKAFSGHGVD-EKTVISILG-NSQPEHRQA 35 (261)
Q Consensus 2 ~Da~~L~~A~~g~gtd-e~~li~Il~-~rs~~q~~~ 35 (261)
.|-+.|.+|++-.|.+ =..|.+-+. +||..|...
T Consensus 7 eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~ 42 (48)
T PF00249_consen 7 EEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRS 42 (48)
T ss_dssp HHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHH
Confidence 4667889999999988 688888888 999988754
No 16
>KOG4368 consensus Predicted RNA binding protein, contains SWAP, RPR and G-patch domains [General function prediction only]
Probab=25.62 E-value=97 Score=30.47 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=36.6
Q ss_pred HhCccHHHHhhcchHHHHHHHhhcCchhhHHHHHhHhhhhhcccccCCC
Q 024862 210 IAGQHFEDELDVHLILQAAVQCLITPQSYFSRVSLHFFFNSVIGVFIYG 258 (261)
Q Consensus 210 ~yg~~L~~~I~~e~~l~~ll~~~~~~~~~~A~~L~~a~~~~~~g~g~~~ 258 (261)
.|..++...-+...-+..-|..+...-.||+.-+++-+.|..-|||||-
T Consensus 193 ~yc~~~~~~~e~~~~~~~~ll~~we~~~yf~ds~~~ql~~~~~~~~~~~ 241 (757)
T KOG4368|consen 193 IYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQ 241 (757)
T ss_pred HHHhhhhhhHhHHHHHHHHHHHHHhhcCchhHHHHHHhhhhhhhhhhHH
Confidence 4555555432222455566677888999999999999999999999974
No 17
>PF01986 DUF123: Domain of unknown function DUF123; InterPro: IPR002837 This archaebacterial domain has no known function. In Methanocaldococcus jannaschii (Methanococcus jannaschii) it occurs with an endonuclease domain IPR003265 from INTERPRO.
Probab=25.52 E-value=45 Score=24.83 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=15.6
Q ss_pred hhHHHHHhHhhhhhcccccCCCcC
Q 024862 237 SYFSRVSLHFFFNSVIGVFIYGCF 260 (261)
Q Consensus 237 ~~~A~~L~~a~~~~~~g~g~~~~~ 260 (261)
--.|..|-... ..++|||-.||-
T Consensus 68 c~lA~~l~~~~-~~i~gFGaSDc~ 90 (99)
T PF01986_consen 68 CELAQALSELF-EPIPGFGASDCR 90 (99)
T ss_pred HHHHHHHHhcC-CcCCCCCCcCCC
Confidence 34565555444 348999999993
No 18
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=24.89 E-value=1.5e+02 Score=17.06 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=26.4
Q ss_pred hHHHHHHHhhcCCC-CCHHHHHHHhcCCCHHHHHH
Q 024862 2 AEIEALIKAFSGHG-VDEKTVISILGNSQPEHRQA 35 (261)
Q Consensus 2 ~Da~~L~~A~~g~g-tde~~li~Il~~rs~~q~~~ 35 (261)
.|-..|.+++...| .+=..|.+.+.+||..|.+.
T Consensus 5 eE~~~l~~~~~~~g~~~w~~Ia~~~~~rs~~~~~~ 39 (45)
T cd00167 5 EEDELLLEAVKKYGKNNWEKIAKELPGRTPKQCRE 39 (45)
T ss_pred HHHHHHHHHHHHHCcCCHHHHHhHcCCCCHHHHHH
Confidence 35567888888888 67788889998899877654
No 19
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=23.49 E-value=1.9e+02 Score=19.56 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=19.6
Q ss_pred HHHHhhcCCCCCHHHHHHHhcCCCHHHH
Q 024862 6 ALIKAFSGHGVDEKTVISILGNSQPEHR 33 (261)
Q Consensus 6 ~L~~A~~g~gtde~~li~Il~~rs~~q~ 33 (261)
.+.+|..| |+.++.+||-...+--.
T Consensus 3 vI~~A~~G---D~~A~~~IL~~y~~yI~ 27 (65)
T PF12645_consen 3 VIKAAKQG---DPEAMEEILKHYEPYIS 27 (65)
T ss_pred HHHHHHcC---CHHHHHHHHHHHHHHHH
Confidence 56778877 99999999988776544
No 20
>PF08811 DUF1800: Protein of unknown function (DUF1800); InterPro: IPR014917 This is an entry of large bacterial proteins of unknown function.
Probab=22.61 E-value=91 Score=29.74 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=63.7
Q ss_pred HHHHhhccCCcHHHHHHHHHHh---------hhh------CCCCCChhHHHHHHHHHHHhhhccccCCCCCh--hhHHHH
Q 024862 129 EEDVASHIHGKEKKLLVALVSA---------YRY------EGPKVKEDVAKSEAKALISAVKNAEKQNPIEN--DEVVRI 191 (261)
Q Consensus 129 ~~~I~~~~sG~~~~~ll~ll~~---------~r~------e~~~v~~~~~~~da~~L~~a~~~~~~~~~~d~--~~li~I 191 (261)
.+.|+.+.-|+|+++|.++... .+. .....|+|.+. ...+|+.-+.+.| -+.. ..+-++
T Consensus 133 ~~~lR~ha~GnFrdLL~av~~~PAMl~YLd~~~n~~~~~~~~~~pNENyAR-ElmELfTLG~~~G---Ytq~DV~e~AR~ 208 (462)
T PF08811_consen 133 NDALRPHALGNFRDLLKAVAKHPAMLIYLDNVQNRKADPRRKRGPNENYAR-ELMELFTLGVGNG---YTQQDVKEAARA 208 (462)
T ss_pred HHHHHHhccCCHHHHHHHHhCCHHHHHHHCCCcCcccccccCCCCCccHHH-HHHHHhccCCCCC---cCHHHHHHHHHH
Confidence 3577888899999999866542 222 23345555443 3455666555432 2322 246688
Q ss_pred hhcCCHHHH------HHHHHHHHH------HhCccHHHHhhcc---hHHHHHHHhhcCchhhHHHHHhHhhhh
Q 024862 192 LSTRSKPHL------KSVFKHYKE------IAGQHFEDELDVH---LILQAAVQCLITPQSYFSRVSLHFFFN 249 (261)
Q Consensus 192 l~~rs~~~L------~~I~~~Y~~------~yg~~L~~~I~~e---~~l~~ll~~~~~~~~~~A~~L~~a~~~ 249 (261)
|+.++.... ...+..... ..|+++.. -... ..++.+|..--+.+.|.|++|++.|.+
T Consensus 209 lTGw~~~~~~~~~~~~~~f~~~~HD~g~KtvLG~t~~~-~~g~~~~~~~ld~L~~hP~tA~fia~kL~~~fv~ 280 (462)
T PF08811_consen 209 LTGWTVDDARGNDTGMFVFRPNRHDPGEKTVLGQTIPA-AGGNDDGDDVLDILAEHPATARFIARKLIRRFVA 280 (462)
T ss_pred HhCCcccCCCCCCCCCeeecccccCCCCceECCccCCC-CCchHHHHHHHHHHHcCCchHHHHHHHHHHHHcC
Confidence 888765543 223333311 13444333 0112 344445544557778999999888854
No 21
>PF08085 Entericidin: Entericidin EcnA/B family; InterPro: IPR012556 This family consists of the entericidin antidote/toxin peptides. The entericidin locus is activated in stationary phase under high osmolarity conditions by rho-S and simultaneously repressed by the osmoregulatory EnvZ/OmpR signal transduction pathway. The entericidin locus encodes tandem paralogous genes (ecnAB) and directs the synthesis of two small cell-envelope lipoproteins which can maintain plasmids in bacterial population by means of post-segregational killing [].; GO: 0009636 response to toxin, 0016020 membrane
Probab=22.41 E-value=29 Score=18.20 Aligned_cols=7 Identities=57% Similarity=0.529 Sum_probs=5.8
Q ss_pred hhccccc
Q 024862 249 NSVIGVF 255 (261)
Q Consensus 249 ~~~~g~g 255 (261)
|+|.|+|
T Consensus 1 NTv~G~G 7 (21)
T PF08085_consen 1 NTVRGVG 7 (21)
T ss_pred Cccchhh
Confidence 6788988
No 22
>PF13921 Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: 1A5J_A 1MBH_A 1GV5_A 1H89_C 1IDY_A 1MBK_A 1IDZ_A 1H88_C 1GVD_A 1MBG_A ....
Probab=21.49 E-value=1.2e+02 Score=19.55 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=23.4
Q ss_pred hHHHHHHHhhcCCCCCHHHHHHHhcCCCHHHHHH
Q 024862 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQA 35 (261)
Q Consensus 2 ~Da~~L~~A~~g~gtde~~li~Il~~rs~~q~~~ 35 (261)
.|-+.|.+.++..|.+=..|.+.|.+||+.|.+.
T Consensus 4 eEd~~L~~~~~~~g~~W~~Ia~~l~~Rt~~~~~~ 37 (60)
T PF13921_consen 4 EEDELLLELVKKYGNDWKKIAEHLGNRTPKQCRN 37 (60)
T ss_dssp HHHHHHHHHHHHHTS-HHHHHHHSTTS-HHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHCcCCHHHHHH
Confidence 3556777777766767678888887799876655
No 23
>COG5118 BDP1 Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
Probab=21.28 E-value=92 Score=28.93 Aligned_cols=36 Identities=31% Similarity=0.369 Sum_probs=29.0
Q ss_pred hHHHHHHHhhcCCCCCHHHHHHHhcCCCHHHHHHHHHHh
Q 024862 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG 40 (261)
Q Consensus 2 ~Da~~L~~A~~g~gtde~~li~Il~~rs~~q~~~i~~~Y 40 (261)
.|.+..++|+.-||||-..|-.+..+|+ |..|+.-|
T Consensus 371 ~e~ekFYKALs~wGtdF~LIs~lfP~R~---RkqIKaKf 406 (507)
T COG5118 371 KEIEKFYKALSIWGTDFSLISSLFPNRE---RKQIKAKF 406 (507)
T ss_pred HHHHHHHHHHHHhcchHHHHHHhcCchh---HHHHHHHH
Confidence 3678899999999999999888887776 45555555
No 24
>PF13758 Prefoldin_3: Prefoldin subunit
Probab=20.93 E-value=2.2e+02 Score=21.18 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHhcC-----CCHHHHHHH
Q 024862 3 EIEALIKAFSGHGVDEKTVISILGN-----SQPEHRQAF 36 (261)
Q Consensus 3 Da~~L~~A~~g~gtde~~li~Il~~-----rs~~q~~~i 36 (261)
|...+++-++|...++..|-+||+. ||++|.-.+
T Consensus 34 ~l~~i~r~f~g~lv~~kEi~~ilG~~~~i~Rt~~Qvv~~ 72 (99)
T PF13758_consen 34 DLLRIRRDFGGSLVTEKEIKEILGEGQGITRTREQVVDV 72 (99)
T ss_pred HHHHHHHhcCcccccHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 4556777778878888999999987 777776554
No 25
>KOG0859 consensus Synaptobrevin/VAMP-like protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.11 E-value=3.6e+02 Score=22.84 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHhhhhcCccHHHHHhhccCCcHHHHHHHHHHhhhhCCCCCChhHHHHHHHHHHHhhhc
Q 024862 108 RSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176 (261)
Q Consensus 108 rs~~~l~~i~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~ll~~~r~e~~~v~~~~~~~da~~L~~a~~~ 176 (261)
++-.-|..|++.|.+.||.....++.-.+...|-+.|..-++..-+....=....+...+.++..-|..
T Consensus 75 ipfaFLe~Ik~~F~k~YG~~a~ta~AysmN~EFs~vL~qqm~y~s~~p~id~lskvkaqv~evk~vM~e 143 (217)
T KOG0859|consen 75 IPFAFLERIKEDFKKRYGGGAHTAVAYSMNKEFSSVLKQQMQYCSEHPEISKLAKVKAQVTEVKGVMME 143 (217)
T ss_pred ccHHHHHHHHHHHHHHhccchhHHHHhHhHHHHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHH
Confidence 344678999999999999998888776666677777776666654433311124455556666666553
Done!