BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024864
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFK1|SYP31_ARATH Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1
Length = 336
Score = 354 bits (909), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 2 SSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRVVHSTTVCDDL 61
S++F+D VEIQELT LI++DIT LNMALSDLQTLQN+E+ +GNYSQD+V H T VCDDL
Sbjct: 75 STIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADGNYSQDQVGHYTAVCDDL 134
Query: 62 KSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVN 121
K++LMGATK+LQDVLTTR+EN+KAHE+RKQ+FS DSP + +A+ V EPPPWSS N
Sbjct: 135 KTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDSPPQNNAKSVPEPPPWSSSSN 194
Query: 122 ASESSQPSALPP--GGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVAL 179
+ Q LPP G G+QLRRR A++NAPS MEMS+LQQ VP+QENYSQSRAVAL
Sbjct: 195 PFGNLQQPLLPPLNTGAPPGSQLRRRSAIENAPSQQMEMSLLQQTVPKQENYSQSRAVAL 254
Query: 180 HNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNR 239
H+VES ITEL GIF LATMV QQGELAIRIDDNMDESL NVEGAR+ALL+HL +ISSNR
Sbjct: 255 HSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGARSALLQHLTRISSNR 314
Query: 240 WLMIKIFAVIIFFLTVFMFFVA 261
WLM+KIFAVII FL VF+FFVA
Sbjct: 315 WLMMKIFAVIILFLIVFLFFVA 336
>sp|Q9LK09|SYP32_ARATH Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1
Length = 347
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/273 (52%), Positives = 180/273 (65%), Gaps = 24/273 (8%)
Query: 2 SSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDR--VVHSTTVCD 59
+S+FDDP EIQELT +IK +I+ALN AL DLQ ++ + EGN S+DR HS TV D
Sbjct: 86 TSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVD 145
Query: 60 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDS--PF-RQH------AQPV 110
DLK +LM TKE +DVLT RTEN+K HESR+Q+FS+NA ++S PF RQ A
Sbjct: 146 DLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASE 205
Query: 111 TEPPPWSSPVNASESSQPSALP--PGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQ 168
+ P PW+ N S SS +P PG + L++ M VP Q
Sbjct: 206 SVPLPWA---NGSSSSSSQLVPWKPGEGESSPLLQQSQQQQQQQQQQM--------VPLQ 254
Query: 169 ENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 228
+ Y Q RA ALH VESTI EL IFT LATMV+QQGE+AIRID NM+++LANVEGA++ L
Sbjct: 255 DTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQL 314
Query: 229 LRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 261
R+LN ISSNRWLM+KIF V+I FL +F+FFVA
Sbjct: 315 ARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRV---VHSTTVCD 59
S+FDD VEI+ELT +IK DI +LN ++ LQ + V SQ HS T+
Sbjct: 123 SLFDDKAVEIEELTYIIKQDINSLNKQIAQLQ-----DFVRAKGSQSGRHLQTHSNTIVV 177
Query: 60 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 119
L+SKL + + + VL RTEN+K SR++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRA------------PVSALPLA--- 222
Query: 120 VNASESSQPSALPPGGVQVGNQLRRRP--AVDNAPSHHMEMSMLQQVVPRQENYSQSRAV 177
P+ L G V +G + R A+D S S Q++ Q++Y QSRA
Sbjct: 223 --------PNHLGGGAVVLGAESRASGDVAIDMMDSR---TSQQLQLIDEQDSYIQSRAD 271
Query: 178 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 237
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 238 NRWLMIK 244
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRV---VHSTTVCD 59
S+FDD VEI+ELT +IK DI +LN ++ LQ + V SQ HS T+
Sbjct: 123 SLFDDKAVEIEELTYIIKQDINSLNKQIAQLQ-----DFVRAKGSQSGRHLQTHSNTIVV 177
Query: 60 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 119
L+SKL + + + VL RTEN+K SR++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRA------------PVSALPLA--- 222
Query: 120 VNASESSQPSALPPGGVQVG--NQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAV 177
P+ L G V +G + + A+D S S Q++ Q++Y QSRA
Sbjct: 223 --------PNHLGGGAVVLGAESHASKDVAIDMMDSR---TSQQLQLIDEQDSYIQSRAD 271
Query: 178 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 237
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 238 NRWLMIK 244
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|O13644|SED5_SCHPO Integral membrane protein sed5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sed5 PE=3 SV=1
Length = 309
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 145/255 (56%), Gaps = 27/255 (10%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRVV--HSTTVCDD 60
++FDD VEIQELT IK +++LN SD+ +LQ ++V+GN ++ + HS V
Sbjct: 72 TLFDDRPVEIQELTFQIKQSLSSLN---SDIASLQ--QVVKGNRNKPAQMNQHSENVVVS 126
Query: 61 LKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPV 120
L++ L + +D+L RT+N+KA ++R + F A++ +A P+ SP
Sbjct: 127 LQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASS------SMNANPLINSGNSISPF 180
Query: 121 NASESSQPSALPPG-GVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVAL 179
+P A + +G D A + + +M++L+ + + YSQ R ++
Sbjct: 181 ADYNDPKPEANEDYLSLNLG---------DGANTRYEQMALLE---SQTDTYSQQRMSSI 228
Query: 180 HNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNR 239
N+ESTITELGGIF+ LA MV++Q E RID + D+ ++N+ A+ +++ ++SSNR
Sbjct: 229 QNIESTITELGGIFSQLAQMVSEQRETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNR 288
Query: 240 WLMIKIFA-VIIFFL 253
L+ KIF VIIFFL
Sbjct: 289 ALLFKIFGIVIIFFL 303
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 130/248 (52%), Gaps = 38/248 (15%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRV---VHSTTVCD 59
S+FDD VEI+ELT +IK DI +LN ++ LQ + V SQ HS T+
Sbjct: 123 SLFDDKAVEIEELTYIIKQDINSLNKQIAQLQ-----DFVRAKGSQSGRHLQTHSNTIVV 177
Query: 60 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 119
L+SKL + + + VL RTEN+K +R++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSR------------APVSALPLA--- 222
Query: 120 VNASESSQPSALPPGGVQVGNQLR--RRPAVDNA-PSHHMEMSMLQQVVPRQENYSQSRA 176
P+ L G + +G + R R A+D P ++ Q++ Q++Y QSRA
Sbjct: 223 --------PNNLGGGPIVLGGESRASRDVAIDMMDPRTSQQL----QLIDEQDSYIQSRA 270
Query: 177 VALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQIS 236
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++
Sbjct: 271 DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVT 330
Query: 237 SNRWLMIK 244
SNRWLM+K
Sbjct: 331 SNRWLMVK 338
>sp|Q24509|STX5_DROME Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2
Length = 467
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 124/243 (51%), Gaps = 20/243 (8%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRVVHSTTVCDDLK 62
S+FDD EIQELT +IK D+ ALN ++ LQ + + N + V HS+ + L+
Sbjct: 229 SLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTN-GKHLVSHSSNMVLALQ 287
Query: 63 SKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVNA 122
SKL + + + +L RTEN+K ++R+ FS P A V+ +
Sbjct: 288 SKLASMSTDFKQILEVRTENLKQQKTRRDQFS-----QGPGPLAAHTVSPSTAKQGSLLL 342
Query: 123 SESSQPSALPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNV 182
SE +Q ++ G + D P + M + +NY Q RA + N+
Sbjct: 343 SEENQAVSIDMG------------SSDTTPLLSTQTQMA--IYDDSDNYVQQRAETMQNI 388
Query: 183 ESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLM 242
ESTI ELGGIF LA MV +Q E+ RID N+ ++ N+E A +L++ +S NRWLM
Sbjct: 389 ESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRWLM 448
Query: 243 IKI 245
IKI
Sbjct: 449 IKI 451
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 130/248 (52%), Gaps = 38/248 (15%)
Query: 3 SMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRV---VHSTTVCD 59
S+FDD VEI+ELT +IK DI +LN ++ LQ + V SQ HS T+
Sbjct: 123 SLFDDKAVEIEELTYIIKQDINSLNKQIAQLQ-----DFVRAKGSQSGRHLQTHSNTIVV 177
Query: 60 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 119
L+SKL + + + VL RTEN+K +R++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSR------------APVSALPLA--- 222
Query: 120 VNASESSQPSALPPGGVQVGNQLR--RRPAVDNA-PSHHMEMSMLQQVVPRQENYSQSRA 176
P+ L G + +G + R R A+D P ++ Q++ Q++Y QSRA
Sbjct: 223 --------PNNLGGGPIILGAESRASRDVAIDMMDPRTSQQL----QLIDEQDSYIQSRA 270
Query: 177 VALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQIS 236
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++
Sbjct: 271 DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVT 330
Query: 237 SNRWLMIK 244
SNRWLM+K
Sbjct: 331 SNRWLMVK 338
>sp|Q20797|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=3 SV=1
Length = 413
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 20/234 (8%)
Query: 11 EIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDRVVHSTTVCDDLKSKLMGATK 70
+I L++++K DIT LN + LQ GN H V L+SKL K
Sbjct: 183 QIDHLSSIVKSDITGLNKQIGQLQEFSKRRA--GNMKNQNSGHIQLVVVGLQSKLANVGK 240
Query: 71 ELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVNASESSQPSA 130
+ Q VL TE +KA ++R+ FS+ A P P ++S ++ S
Sbjct: 241 DYQSVLEISTETMKAEKNRRDKFSSGA---------------AVPMGLPSSSSGANVRSK 285
Query: 131 LPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELG 190
L Q G+ A+D +M+ Q Y+Q+R+ + +E +I+ELG
Sbjct: 286 LLQDDEQHGSS---SIALDMGALSNMQSQQTMQQRDSSLEYAQARSNTMATIEGSISELG 342
Query: 191 GIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIK 244
IF+ LA++V++QGE+ RID N++++ N++ A + L+R+L IS NRWLMI+
Sbjct: 343 QIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHSELVRYLQNISKNRWLMIQ 396
>sp|Q01590|SED5_YEAST Integral membrane protein SED5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SED5 PE=1 SV=1
Length = 340
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 28/255 (10%)
Query: 4 MFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIVEGNYSQDR------VVHSTTV 57
MF+D VEI EL+ LIK I A+ +L L L+ + V GN S V HS V
Sbjct: 84 MFNDNPVEIAELSFLIKRKIYAIEQSLVQLSQLKKTD-VNGNTSNQSSKQPSAVQHSKNV 142
Query: 58 CDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANA----LRDSPFRQHAQPVT-- 111
+ L +++ + +DVL R A++ R Q + + D HA +T
Sbjct: 143 VNLLNTQMKNISGSFKDVLEERQRLEMANKDRWQKLTTDTGHAPADDQTQSNHAADLTTY 202
Query: 112 --EPPPWSSPVNASESSQPSALPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQE 169
P +S ++ S ++ G + P + ++ ++++
Sbjct: 203 NNSNPFMTSLLDESSEKNNNSSNQGELSF-------------PQNDSQLMLMEEGQLSNN 249
Query: 170 NYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALL 229
Y Q R A+ +ESTI E+G +F LA+MV +QGE+ RID N+D+ N+ GA+ LL
Sbjct: 250 VYLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELL 309
Query: 230 RHLNQISSNRWLMIK 244
++ ++I SNRWL K
Sbjct: 310 KYFDRIKSNRWLAAK 324
>sp|P32854|PEP12_YEAST Syntaxin PEP12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PEP12 PE=1 SV=2
Length = 288
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 168 QENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNA 227
Q+N + R + N+E ITEL +F L ++V QQG L I+ N+ + N + A +
Sbjct: 194 QQNLIEQRDQEISNIERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTTSDNTQLASDE 253
Query: 228 LLRHLN-QISSNRW 240
L + + Q ++RW
Sbjct: 254 LRKAMRYQKRTSRW 267
>sp|Q08850|STX4_RAT Syntaxin-4 OS=Rattus norvegicus GN=Stx4 PE=1 SV=1
Length = 298
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
QV + N +R + +E TI EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERTIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 223 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 260
G + + NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKIALENQKKARKK---KVMIAICVSVTVLILAV 289
>sp|Q12846|STX4_HUMAN Syntaxin-4 OS=Homo sapiens GN=STX4 PE=1 SV=2
Length = 297
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 223 GARNALLRHL-NQISSNRWLMIKIFAVIIFFLTVFMFFV 260
+ + L NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKTALENQKKARKK---KVLIAICVSITVVLLAV 289
>sp|Q9P6P1|TLG2_SCHPO t-SNARE affecting a late Golgi compartment protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg2 PE=3 SV=1
Length = 301
Score = 37.7 bits (86), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 159 SMLQQVVPRQENYSQSRAV----ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNM 214
S +QQV +E +A+ A+ + I EL +F L +V +QG L RID N+
Sbjct: 192 STIQQVALMEEQGEDEQAIRHERAVAKIAEGIIELAQMFQDLQVLVIEQGALVDRIDFNI 251
Query: 215 DESLANVEGARNALLR-HLNQISSNRWLMIKIFAVIIFFLTVFM 257
+++ + + A L++ +Q ++ R I ++I L V +
Sbjct: 252 EQTQVHAKSAEKELIKAESHQKNTGRLRFICFLILLIVALIVIL 295
>sp|P70452|STX4_MOUSE Syntaxin-4 OS=Mus musculus GN=Stx4 PE=1 SV=1
Length = 298
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 223 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 260
G + + NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKIALENQKKARKK---KVMIAICVSVTVLILAV 289
>sp|Q3SWZ3|STX4_BOVIN Syntaxin-4 OS=Bos taurus GN=STX4 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 223 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLT 254
G + + NQ + + K+F I +T
Sbjct: 254 RGQEHVKVALENQKKARKK---KVFIAICLSIT 283
>sp|Q12241|VAM3_YEAST Syntaxin VAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VAM3 PE=1 SV=1
Length = 283
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLR 230
Q R+ + + + + E+ IF L ++V +QGE ID+N+ N++ A L R
Sbjct: 194 QERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDENISHLHDNMQNANKQLTR 251
>sp|P61268|STX1B_SHEEP Syntaxin-1B OS=Ovis aries GN=STX1B PE=2 SV=1
Length = 288
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 157 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 216
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 217 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 250
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61267|STX1B_BOVIN Syntaxin-1B OS=Bos taurus GN=STX1B PE=1 SV=1
Length = 288
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 157 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 216
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 217 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 250
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61265|STX1B_RAT Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=1
Length = 288
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 157 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 216
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 217 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 250
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61264|STX1B_MOUSE Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1
Length = 288
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 157 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 216
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 217 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 250
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61266|STX1B_HUMAN Syntaxin-1B OS=Homo sapiens GN=STX1B PE=1 SV=1
Length = 288
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 157 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 216
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 217 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 250
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|Q9ZPV9|SY112_ARATH Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2
Length = 305
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLAN-- 220
+V P + ++ R A+++++ ++ L +F +A +V QG+ RIDD ++ ++AN
Sbjct: 204 EVKPEMDLKTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGD---RIDD-IEANVANAG 259
Query: 221 --VEGARNALLRHLNQI--SSNRW-LMIKIFAVIIFFLTV 255
V G N+L + NQ+ + W L + I V+I + V
Sbjct: 260 SFVSGGTNSLY-YANQMKKKTKSWVLWVSILGVLILLVCV 298
>sp|P32856|STX2_HUMAN Syntaxin-2 OS=Homo sapiens GN=STX2 PE=1 SV=3
Length = 288
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ + VE
Sbjct: 185 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVE 244
Query: 223 GAR---NALLRHLNQISSNRWLMIKIFAVIIFFLTVFM 257
A+ +++ ++ +W++I + V++ + + +
Sbjct: 245 HAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALII 282
>sp|Q20024|STX1_CAEEL Putative syntaxin-1 OS=Caenorhabditis elegans GN=syn-1 PE=3 SV=3
Length = 306
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMD-------ESLANVEGAR 225
+SRA L N+E + EL +F L MV QGE+ I ++++ ++ NVE AR
Sbjct: 208 KSRADELKNLERQMGELAQMFHDLHIMVVSQGEMVDSIVNSVENATEYAKQARGNVEEAR 267
Query: 226 NALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFF 259
N Q + + + I II L + +F
Sbjct: 268 NL------QKRARKMKVCIIIGSIIAVLILILFI 295
>sp|O16000|STX1A_CAEEL Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1
Length = 291
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 178 ALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLN 233
A HN +ES+I EL +F +A +V QGE+ RI+ N++ + V+ A + +
Sbjct: 198 ARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQ 257
Query: 234 QISSNRWLMIKIF---AVIIFFLTVFMFFVA 261
S R I I ++I L +F+ F A
Sbjct: 258 YQSKARRKKICILVTGVILITGLIIFILFYA 288
>sp|P32850|STX1A_BOVIN Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1
Length = 288
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ N++ S+ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAV 255
Query: 233 NQISSNRW--LMIKIFAVIIFFLTVFMF 258
S R +MI I V++ + F
Sbjct: 256 KYQSKARRKKIMIVICCVVLGIVIASTF 283
>sp|O70439|STX7_MOUSE Syntaxin-7 OS=Mus musculus GN=Stx7 PE=1 SV=3
Length = 261
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 179 LHNVESTITELGG-------IFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRH 231
+H ES+I +L IF L M+ +QG++ I+ N++ + +V+ A L R
Sbjct: 168 IHERESSIRQLEADIMDINEIFKDLGMMIHEQGDMIDSIEANVESAEVHVQQANQQLSRA 227
Query: 232 LNQISSNRWLMIKIFAVIIFFLTVFMFFVA 261
+ +R K +IIF L V + +
Sbjct: 228 ADYQRKSR----KTLCIIIFILVVRIVIIC 253
>sp|Q39233|SYP21_ARATH Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1
Length = 279
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 153 SHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDD 212
S E+ L + E + R + +E I ++ G+F LA MV QG + I
Sbjct: 170 SRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISS 229
Query: 213 NMDESLANVEGARNALLRHLNQISSNR---WLMIKIFA 247
N+D S A A L + SN L+I IF
Sbjct: 230 NLDNSHAATTQATVQLRKAAKTQRSNSSLTCLLILIFG 267
>sp|O65359|SYP41_ARATH Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1
Length = 322
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 143 RRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQ 202
R RP D+ E M + + + E S R + V ++ +L I L+ +V
Sbjct: 202 RYRPEEDDFGDMLNEHQMSK--IKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVID 259
Query: 203 QGELAIRIDDNMDESLANVEGARNAL------LRHLNQISSNRWLMIKIFAVIIFFLTVF 256
QG + RID N++ VE L RH + L+I F +++ +
Sbjct: 260 QGTIVDRIDYNIENVATTVEDGLKQLQKAERTQRHGGMVKCASVLVILCFIMLLLLILKE 319
Query: 257 MFF 259
+F
Sbjct: 320 IFL 322
>sp|O35526|STX1A_MOUSE Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3
Length = 288
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 233 NQISSNRW--LMIKIFAVII 250
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|Q16623|STX1A_HUMAN Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1
Length = 288
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 233 NQISSNRW--LMIKIFAVII 250
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|P32851|STX1A_RAT Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1
Length = 288
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 233 NQISSNRW--LMIKIFAVII 250
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|Q5R4L2|STX1A_PONAB Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1
Length = 288
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 233 NQISSNRW--LMIKIFAVI 249
S R +MI I VI
Sbjct: 256 KYQSKARRKKIMIIICCVI 274
>sp|Q24547|STX1A_DROME Syntaxin-1A OS=Drosophila melanogaster GN=Syx1A PE=1 SV=1
Length = 291
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
++R + +E++I EL +F +A +V QGE+ RI+ +++ ++ V+ A + L
Sbjct: 199 EARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKAL 258
Query: 233 NQISSNRWLMIKIFAVIIFFLTVFMFFVA 261
S R I +I+ LTV A
Sbjct: 259 KYQSKARRKKI----MILICLTVLGILAA 283
>sp|Q8BVI5|STX16_MOUSE Syntaxin-16 OS=Mus musculus GN=Stx16 PE=1 SV=3
Length = 326
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
+ R + + +I++L IF L M+ +QG + RID N+++S E L +
Sbjct: 235 EEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCVKTEDGLKQLHKAE 294
Query: 233 NQISSNRWL 241
NR +
Sbjct: 295 QYQKKNRKM 303
>sp|Q9SUJ1|SYP43_ARATH Syntaxin-43 OS=Arabidopsis thaliana GN=SYP43 PE=2 SV=2
Length = 331
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 165 VPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGA 224
+ + E S R + V +++EL I L+ +V QG + RID N+ + V+
Sbjct: 231 IKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDG 290
Query: 225 RNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 260
L + +M VI+ F+ + + +
Sbjct: 291 LKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLIL 326
>sp|Q16932|STX_APLCA Syntaxin OS=Aplysia californica PE=2 SV=1
Length = 290
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 178 ALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGAR 225
A HN +E++I +L +F +A +V QGE+ RI+ N+++++ +E A+
Sbjct: 199 ARHNDIMKLETSIRDLHDMFMDMAMLVESQGEMIDRIEYNVEQAVDYIETAK 250
>sp|Q54X86|STX7B_DICDI Probable syntaxin-7B OS=Dictyostelium discoideum GN=syn7B PE=3 SV=1
Length = 286
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 196 LATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTV 255
+A MV +QGE+ ++DDN+ + VE A L + SS R MI ++ L
Sbjct: 212 IAVMVGEQGEMLEKVDDNVTNADVAVEDAVVELEKAYVYKSSYRKKMIIFVICLLVTLVA 271
Query: 256 FMFFVA 261
F+A
Sbjct: 272 VGIFLA 277
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 169 ENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 228
E Y + R + + + E+ IF + +V QG + RID N++ ++ ++ A
Sbjct: 244 EAYLRERDEEITQLARGVLEVSTIFREMQDLVVDQGTIVDRIDYNLENTVVELKSAD--- 300
Query: 229 LRHLNQIS--SNRWLMIKIFAVIIFFLTVFMFFV 260
+ LN+ + R K+ ++ + FFV
Sbjct: 301 -KELNKATHYQKRTQKCKVILLLTLCVIALFFFV 333
>sp|O14662|STX16_HUMAN Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3
Length = 325
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
+ R + + +I++L IF L M+ +QG + RID N+++S E L +
Sbjct: 234 EEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAE 293
Query: 233 NQISSNRWL 241
NR +
Sbjct: 294 QYQKKNRKM 302
>sp|Q00262|STX2_MOUSE Syntaxin-2 OS=Mus musculus GN=Stx2 PE=1 SV=1
Length = 289
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ S+ VE
Sbjct: 186 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 245
Query: 223 GAR---NALLRHLNQISSNRW 240
A+ +++ ++ +W
Sbjct: 246 HAKEETKKAIKYQSKARRKKW 266
>sp|P50279|STX2_RAT Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2
Length = 290
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 163 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 222
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ S+ VE
Sbjct: 187 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 246
Query: 223 GAR---NALLRHLNQISSNRW 240
A+ +++ ++ +W
Sbjct: 247 HAKEETKKAIKYQSKARRKKW 267
>sp|P39926|SSO2_YEAST Protein SSO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SSO2 PE=1 SV=2
Length = 295
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 173 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 232
Q+R L +E T+ EL +F + +V +Q E ID N++++ +VE + H
Sbjct: 198 QARHQELLKLEKTMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQQDVEQG----VGHT 253
Query: 233 NQI--SSNRWLMIKIFAVIIFFL 253
N+ S+ + KI +II F+
Sbjct: 254 NKAVKSARKARKNKIRCLIICFI 276
>sp|Q47BK8|ISPH_DECAR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
OS=Dechloromonas aromatica (strain RCB) GN=ispH PE=3
SV=1
Length = 306
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 46 YSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQI 92
Y + VVH+ VCDDL++K +EL +V T AH K +
Sbjct: 34 YVRHEVVHNKFVCDDLRAKGAVFVEELDEVPAGSTVIFSAHGVSKAV 80
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 13/58 (22%)
Query: 101 SPFRQHAQPVTEPPPWSSPVNASE-----------SSQPSALPPGGVQVGNQLRRRPA 147
SP QH+Q P P SP+ A E SQP AL PG Q NQ R P+
Sbjct: 111 SPMDQHSQGYMSPHP--SPLGAPEHVSSPTPPQMPPSQPGALIPGDPQAMNQPNRGPS 166
>sp|A8WVD0|STX1A_CAEBR Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1
Length = 293
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 178 ALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGA 224
A HN +ES+I EL +F +A +V QGE+ RI+ N++ + V+ A
Sbjct: 200 ARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRA 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,291,624
Number of Sequences: 539616
Number of extensions: 3316153
Number of successful extensions: 15106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 15017
Number of HSP's gapped (non-prelim): 135
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)