Query 024865
Match_columns 261
No_of_seqs 245 out of 1328
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 15:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 4.8E-18 1.6E-22 143.9 14.9 137 94-239 5-144 (195)
2 1u8s_A Glycine cleavage system 99.7 4E-16 1.4E-20 131.3 18.1 134 94-239 6-146 (192)
3 3p96_A Phosphoserine phosphata 98.6 1.5E-06 5.1E-11 80.5 17.8 121 93-220 11-136 (415)
4 2nyi_A Unknown protein; protei 98.4 2.1E-07 7.2E-12 78.2 6.1 71 91-166 90-163 (195)
5 2f06_A Conserved hypothetical 98.3 4.6E-05 1.6E-09 60.3 15.2 99 95-219 7-105 (144)
6 1u8s_A Glycine cleavage system 98.2 3.3E-06 1.1E-10 70.4 8.0 72 91-166 90-166 (192)
7 1zpv_A ACT domain protein; str 98.2 1.3E-05 4.6E-10 58.2 9.9 65 94-166 5-70 (91)
8 2ko1_A CTR148A, GTP pyrophosph 98.1 1.8E-05 6.2E-10 56.9 9.2 63 94-163 5-67 (88)
9 2re1_A Aspartokinase, alpha an 97.7 0.00043 1.5E-08 56.3 12.2 106 93-216 24-136 (167)
10 1zpv_A ACT domain protein; str 97.7 0.00032 1.1E-08 50.8 9.8 33 188-220 7-39 (91)
11 2ko1_A CTR148A, GTP pyrophosph 97.7 0.00027 9.1E-09 50.6 9.1 37 185-221 4-40 (88)
12 2f1f_A Acetolactate synthase i 97.5 0.00039 1.3E-08 56.8 8.9 66 95-166 4-69 (164)
13 2pc6_A Probable acetolactate s 97.4 0.00062 2.1E-08 55.6 8.6 66 95-166 5-70 (165)
14 2dtj_A Aspartokinase; protein- 97.4 0.003 1E-07 51.8 12.7 106 92-216 13-128 (178)
15 3obi_A Formyltetrahydrofolate 97.3 0.0014 4.9E-08 58.1 11.0 66 94-164 6-72 (288)
16 3o1l_A Formyltetrahydrofolate 97.2 0.0023 8E-08 57.1 10.6 67 93-164 21-88 (302)
17 2dt9_A Aspartokinase; protein- 97.2 0.0042 1.5E-07 50.2 11.2 108 92-216 14-128 (167)
18 3nrb_A Formyltetrahydrofolate 97.1 0.0027 9.2E-08 56.3 10.2 45 93-137 6-50 (287)
19 3n0v_A Formyltetrahydrofolate 97.1 0.0032 1.1E-07 55.7 10.5 66 94-164 8-73 (286)
20 2fgc_A Acetolactate synthase, 96.8 0.0063 2.2E-07 50.7 9.5 67 94-166 29-95 (193)
21 2jhe_A Transcription regulator 96.8 0.0014 4.6E-08 52.7 4.9 33 188-220 2-34 (190)
22 3lou_A Formyltetrahydrofolate 96.7 0.082 2.8E-06 46.8 16.5 45 93-137 9-53 (292)
23 2jhe_A Transcription regulator 96.5 0.012 4E-07 47.1 8.8 59 96-164 2-60 (190)
24 3s1t_A Aspartokinase; ACT doma 96.4 0.034 1.2E-06 45.6 11.4 110 93-218 15-131 (181)
25 1y7p_A Hypothetical protein AF 96.3 0.013 4.4E-07 49.8 7.7 49 94-142 4-55 (223)
26 2qmx_A Prephenate dehydratase; 96.2 0.0069 2.4E-07 53.5 6.2 56 186-245 200-255 (283)
27 4go7_X Aspartokinase; transfer 96.1 0.043 1.5E-06 45.9 10.5 110 92-217 33-149 (200)
28 3mwb_A Prephenate dehydratase; 96.0 0.011 3.8E-07 52.9 6.8 65 187-255 202-269 (313)
29 1y7p_A Hypothetical protein AF 96.0 0.0094 3.2E-07 50.6 5.9 34 188-221 6-39 (223)
30 3luy_A Probable chorismate mut 96.0 0.026 8.8E-07 50.9 9.0 47 195-245 217-263 (329)
31 3lou_A Formyltetrahydrofolate 95.9 0.0059 2E-07 54.2 4.4 33 188-220 12-44 (292)
32 2f1f_A Acetolactate synthase i 95.9 0.019 6.5E-07 46.7 6.9 33 188-220 5-37 (164)
33 3nrb_A Formyltetrahydrofolate 95.9 0.0068 2.3E-07 53.7 4.6 32 188-219 9-40 (287)
34 3obi_A Formyltetrahydrofolate 95.9 0.0066 2.2E-07 53.8 4.5 32 188-219 8-39 (288)
35 3n0v_A Formyltetrahydrofolate 95.9 0.0068 2.3E-07 53.6 4.6 32 188-219 10-41 (286)
36 3ab4_A Aspartokinase; aspartat 95.8 0.14 4.7E-06 47.4 13.5 108 93-215 263-376 (421)
37 3o1l_A Formyltetrahydrofolate 95.8 0.0067 2.3E-07 54.1 4.3 33 188-220 24-56 (302)
38 2qmw_A PDT, prephenate dehydra 95.6 0.024 8.4E-07 49.6 6.9 50 187-240 187-239 (267)
39 3p96_A Phosphoserine phosphata 95.5 0.01 3.4E-07 54.6 4.3 33 188-220 14-46 (415)
40 2pc6_A Probable acetolactate s 95.1 0.012 4.2E-07 47.8 3.0 34 187-220 5-38 (165)
41 2f06_A Conserved hypothetical 94.2 0.36 1.2E-05 37.4 9.7 46 95-142 73-118 (144)
42 3c1m_A Probable aspartokinase; 93.9 0.41 1.4E-05 45.0 11.1 104 93-216 317-437 (473)
43 1ygy_A PGDH, D-3-phosphoglycer 93.9 0.21 7.2E-06 47.6 9.1 52 92-143 452-503 (529)
44 1sc6_A PGDH, D-3-phosphoglycer 93.5 0.37 1.3E-05 44.4 9.9 49 93-143 330-378 (404)
45 2fgc_A Acetolactate synthase, 93.3 0.07 2.4E-06 44.4 4.0 34 187-220 30-63 (193)
46 3l76_A Aspartokinase; alloster 92.4 1.3 4.4E-05 42.9 12.2 110 92-215 353-474 (600)
47 3tvi_A Aspartokinase; structur 92.1 0.82 2.8E-05 42.7 10.1 103 93-218 297-409 (446)
48 3l76_A Aspartokinase; alloster 91.9 2.3 7.9E-05 41.1 13.4 108 92-218 442-562 (600)
49 3luy_A Probable chorismate mut 90.8 1.8 6E-05 38.8 10.5 54 93-148 205-261 (329)
50 2qmx_A Prephenate dehydratase; 90.5 0.98 3.4E-05 39.6 8.4 54 93-148 199-253 (283)
51 1phz_A Protein (phenylalanine 90.4 0.32 1.1E-05 45.2 5.3 64 188-256 36-101 (429)
52 2cdq_A Aspartokinase; aspartat 89.9 1.1 3.6E-05 42.7 8.6 107 93-217 340-453 (510)
53 3mah_A Aspartokinase; aspartat 87.5 0.95 3.3E-05 35.7 5.7 99 93-218 17-121 (157)
54 3k5p_A D-3-phosphoglycerate de 86.9 1.9 6.5E-05 39.8 8.1 49 92-142 341-389 (416)
55 3mwb_A Prephenate dehydratase; 86.7 1.9 6.5E-05 38.3 7.7 54 93-148 200-255 (313)
56 2qmw_A PDT, prephenate dehydra 85.4 2.6 8.8E-05 36.6 7.7 49 93-143 185-237 (267)
57 1sc6_A PGDH, D-3-phosphoglycer 85.3 1.5 5.1E-05 40.3 6.4 38 188-227 333-370 (404)
58 3mtj_A Homoserine dehydrogenas 83.5 0.84 2.9E-05 42.6 4.0 31 186-216 359-389 (444)
59 1ygy_A PGDH, D-3-phosphoglycer 82.8 2.7 9.2E-05 39.9 7.3 41 188-228 456-496 (529)
60 2re1_A Aspartokinase, alpha an 81.4 6 0.0002 31.3 7.9 33 92-124 101-136 (167)
61 2dtj_A Aspartokinase; protein- 78.3 7.2 0.00025 31.2 7.5 62 92-167 93-157 (178)
62 3k5p_A D-3-phosphoglycerate de 78.2 5 0.00017 37.0 7.2 46 188-240 345-390 (416)
63 3mtj_A Homoserine dehydrogenas 77.3 2.5 8.5E-05 39.4 4.9 32 93-124 358-389 (444)
64 1phz_A Protein (phenylalanine 70.7 6.7 0.00023 36.3 5.9 51 91-143 31-82 (429)
65 2dt9_A Aspartokinase; protein- 68.8 5.1 0.00017 31.7 4.2 32 92-123 93-127 (167)
66 3s1t_A Aspartokinase; ACT doma 62.3 27 0.00092 28.0 7.5 61 93-167 95-158 (181)
67 4go7_X Aspartokinase; transfer 53.9 5 0.00017 33.2 1.6 28 188-215 37-65 (200)
68 3c1m_A Probable aspartokinase; 43.8 46 0.0016 30.8 6.8 60 187-257 319-381 (473)
69 2cdq_A Aspartokinase; aspartat 42.7 69 0.0024 30.1 7.8 64 187-258 342-409 (510)
70 2j0w_A Lysine-sensitive aspart 39.7 18 0.00063 33.4 3.3 103 93-215 307-416 (449)
71 3ab4_A Aspartokinase; aspartat 38.2 95 0.0033 28.1 7.9 61 93-167 343-406 (421)
72 3mah_A Aspartokinase; aspartat 35.1 14 0.00048 28.8 1.4 44 188-239 20-66 (157)
73 1zhv_A Hypothetical protein AT 31.1 28 0.00095 26.8 2.5 24 193-216 72-95 (134)
74 1zvp_A Hypothetical protein VC 30.0 28 0.00095 26.8 2.3 25 192-216 80-104 (133)
75 3dhx_A Methionine import ATP-b 27.7 1.5E+02 0.0052 21.1 6.1 51 106-163 36-86 (106)
76 1zhv_A Hypothetical protein AT 25.5 1.7E+02 0.0058 22.3 6.1 34 93-128 61-97 (134)
77 1rwu_A Hypothetical UPF0250 pr 22.7 2.3E+02 0.0078 20.7 8.2 63 92-162 34-99 (109)
78 3rri_A Glyoxalase/bleomycin re 22.5 1.3E+02 0.0045 21.2 4.9 46 198-245 79-124 (135)
79 1zvp_A Hypothetical protein VC 22.1 1.1E+02 0.0037 23.3 4.4 33 91-123 68-103 (133)
80 2qsw_A Methionine import ATP-b 21.0 2.2E+02 0.0075 19.9 7.0 39 105-146 37-75 (100)
81 1ecs_A Bleomycin resistance pr 20.6 2.2E+02 0.0076 19.8 6.2 41 200-245 69-115 (126)
82 1ib8_A Conserved protein SP14. 20.3 3.1E+02 0.011 21.3 9.1 54 107-167 14-69 (164)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=4.8e-18 Score=143.88 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=98.4
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcCC-cee
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP-LRV 172 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~~-~~~ 172 (261)
..+|+|+|+||||||++|+++|+++|+||++|++++. .|+.++ .|.|..++. ..+.+++.|++.|..++... ...
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~-~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL-GGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE-CCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcCCeE
Confidence 5789999999999999999999999999999999973 565666 777762221 22345677777776554321 111
Q ss_pred eeecCCCCcceeeeeeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeecc--ceeEEEEEEEEeCC
Q 024865 173 TVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIG--DREWEVYRVLLDEG 239 (261)
Q Consensus 173 ~~~~~~~~~~v~~~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~g--er~~dv~~F~i~~~ 239 (261)
....+ +...-.-.++|+|.|+|||||+++|+++|+++|+||..+++. +.+ ++++++ ||+...
T Consensus 81 ~~~~~-~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~--t~~~~~~~~~~--F~m~~~ 144 (195)
T 2nyi_A 81 SVAER-HVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETE--TLPAPFAGFTL--FRMGSR 144 (195)
T ss_dssp CC-----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEE--EEECSSTTCEE--EEEEEE
T ss_pred EEEeC-CcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceee--ecccccCCCCe--EEEEEE
Confidence 11000 000111235899999999999999999999999999999998 454 666676 887554
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.72 E-value=4e-16 Score=131.31 Aligned_cols=134 Identities=14% Similarity=0.098 Sum_probs=95.7
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcC-Ccee
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ-PLRV 172 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~-~~~~ 172 (261)
..+|+|+|+||||++++|+++|+++|+||.++++++ +.| ...-.|.|..+ +..++.|++.|.+.... ....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~~-~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FGK-EFTLLMLISGS------PSNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETT-EEEEEEEEEEC------HHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cCC-ceEEEEEEecC------CCCHHHHHHHHHHHHHhcCCEE
Confidence 578999999999999999999999999999999996 355 44447777521 24677888888876532 1222
Q ss_pred ee--ecCCCCcceeeeeeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeeccc----eeEEEEEEEEeCC
Q 024865 173 TV--VSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGD----REWEVYRVLLDEG 239 (261)
Q Consensus 173 ~~--~~~~~~~~v~~~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ge----r~~dv~~F~i~~~ 239 (261)
.. ..+.++..-....+|+|.+.||||+|++|+.+|+++|+||..+++. +.++ +.+++ ||+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~--t~~~~~~~~~~~~--F~~~~~ 146 (192)
T 1u8s_A 78 MMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQ--TISKDKLHSEQNQ--FHIAIS 146 (192)
T ss_dssp EEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEE--EEC--------CE--EEEEEE
T ss_pred EEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhh--cccCCccCCCCCE--EEEEEE
Confidence 21 1111111111235899999999999999999999999999999987 5553 56666 777543
No 3
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.63 E-value=1.5e-06 Score=80.54 Aligned_cols=121 Identities=9% Similarity=0.038 Sum_probs=80.3
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhhcC-Cc
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELLQ-PL 170 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L~~-~~ 170 (261)
...+|+|.|+||||+.+.|+++|+++|+||.+..-+ ..++++.-...+. +.+. ...+.|+++|...-.. ..
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~--~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~ 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQV--VIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGL 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEE--EETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeE--EECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCe
Confidence 456899999999999999999999999999998887 4444654444443 2110 0225666666543221 12
Q ss_pred eeeeecCCCCcce--eeeeeeEEEeCC-cccHHHHHHHHHHhCCceEEEEEEe
Q 024865 171 RVTVVSRGPDTEL--LVANPVELSGKG-RPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 171 ~~~~~~~~~~~~v--~~~t~iev~~~D-RpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
.+...+....++. .-+..+++.+.| +||++.+|+.+++++|+||...+--
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~ 136 (415)
T 3p96_A 84 DVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGV 136 (415)
T ss_dssp EEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeec
Confidence 2222111001111 112479999999 9999999999999999999655544
No 4
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.45 E-value=2.1e-07 Score=78.17 Aligned_cols=71 Identities=11% Similarity=0.000 Sum_probs=55.1
Q ss_pred CCCeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCC--CeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhh
Q 024865 91 SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRG--NCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMEL 166 (261)
Q Consensus 91 ~~~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g--~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L 166 (261)
....+.|+|.|+||||++++|+++|+++|+||.+++++ +.+ ++..|.|++. .-+.+ ++.. +.|+++|....
T Consensus 90 ~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~--t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 90 DTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETE--TLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp TEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEE--EEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHH
T ss_pred CCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceee--ecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHH
Confidence 34678999999999999999999999999999999999 454 5567888885 32222 2334 77888877654
No 5
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.25 E-value=4.6e-05 Score=60.34 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=65.6
Q ss_pred EEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcCCceeee
Q 024865 95 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTV 174 (261)
Q Consensus 95 t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~~~~~~~ 174 (261)
..++|..+|+||.++++++.|++.|+||..-.+..+.+ .. ++.++ ..++ +..++.|.+. + ..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~--~~--~~~~~-----~~d~---~~a~~~L~~~--G-~~--- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD--FG--ILRGI-----VSDP---DKAYKALKDN--H-FA--- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS--CE--EEEEE-----ESCH---HHHHHHHHHT--T-CC---
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCC--CC--EEEEE-----eCCH---HHHHHHHHHc--C-Ce---
Confidence 57888999999999999999999999998654442122 11 12222 1222 2333444431 1 11
Q ss_pred ecCCCCcceeeeeeeEEEeCCcccHHHHHHHHHHhCCceEEEEEE
Q 024865 175 VSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEI 219 (261)
Q Consensus 175 ~~~~~~~~v~~~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI 219 (261)
+....++-+.-.|+||.+++|+++|++.|+||.+...
T Consensus 69 --------v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~ 105 (144)
T 2f06_A 69 --------VNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYS 105 (144)
T ss_dssp --------EEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred --------EeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEE
Confidence 1112356667789999999999999999999955443
No 6
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.21 E-value=3.3e-06 Score=70.38 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=53.0
Q ss_pred CCCeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCC----eEEEEEEEe-cCCCCCCChhhHHHHHHHHHHh
Q 024865 91 SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGN----CEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWME 165 (261)
Q Consensus 91 ~~~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~----~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~ 165 (261)
+...+.|.|.++||||++++|+++|.++|+||.+++.. +.++ +..|.|++. .-+.+ ++...+.|+++|...
T Consensus 90 ~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~--t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~ 165 (192)
T 1u8s_A 90 HAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQ--TISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDAL 165 (192)
T ss_dssp CSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEE--EEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHH
T ss_pred CCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhh--cccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998 5552 577888885 32211 223457788887765
Q ss_pred h
Q 024865 166 L 166 (261)
Q Consensus 166 L 166 (261)
.
T Consensus 166 ~ 166 (192)
T 1u8s_A 166 C 166 (192)
T ss_dssp H
T ss_pred H
Confidence 4
No 7
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.18 E-value=1.3e-05 Score=58.22 Aligned_cols=65 Identities=6% Similarity=0.086 Sum_probs=49.0
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhh
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMEL 166 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L 166 (261)
...|.|.++||||++++|+++|+++|+||.+....+. . +.+.-.+.+. ++ ...++.|.++|.+.-
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~-~-~~~~~~i~v~~~~------~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL-D-EYFTMMAVVSSDE------KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE-T-TEEEEEEEEEESS------CCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE-c-CEEEEEEEEEeCC------CCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999888743 3 4665556554 32 134567777776543
No 8
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.11 E-value=1.8e-05 Score=56.86 Aligned_cols=63 Identities=13% Similarity=0.194 Sum_probs=46.9
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHH
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 163 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~ 163 (261)
.+.|.|.+.||||+|++|+++|+++|+||.+..+. +.++.+...|.+.. .+.+.++++.++|.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~--~~~~~~~~~i~v~~-----~~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLN--AKDGIFTCNLMIFV-----KNTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEE--ECSSEEEEEEEEEE-----SSHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEE--EcCCEEEEEEEEEE-----CCHHHHHHHHHHHh
Confidence 46789999999999999999999999999998887 34436666666641 12345555555544
No 9
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.74 E-value=0.00043 Score=56.30 Aligned_cols=106 Identities=18% Similarity=0.121 Sum_probs=68.7
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcCCce
Q 024865 93 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLR 171 (261)
Q Consensus 93 ~~t~l~V~-~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~~~~ 171 (261)
+.+.|.|. .+|+||.+++|..+|+++|+||..--...+.+| ..-=+|.|.. ...++..+.|.+.. .+..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g-~~~isf~v~~--------~~~~~a~~~l~~~~-~~l~ 93 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEG-TTDFSFTVPR--------GDYKQTLEILSERQ-DSIG 93 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----C-EEEEEEEECG--------GGHHHHHHHHHHSS-TTTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCC-eeEEEEEEec--------hHHHHHHHHHHHHH-HHcC
Confidence 57888888 599999999999999999999984322211223 3333466641 12233334444422 2211
Q ss_pred eeeecCCCCcceee---eeeeEEEeCC---cccHHHHHHHHHHhCCceEEE
Q 024865 172 VTVVSRGPDTELLV---ANPVELSGKG---RPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 172 ~~~~~~~~~~~v~~---~t~iev~~~D---RpGLL~dI~~~l~~~~l~I~~ 216 (261)
. ..+.. ...+.|.+.+ +||+++++..+|.+.|+||..
T Consensus 94 ~--------~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 94 A--------ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp C--------SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred C--------ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 1 01111 1378888876 999999999999999999977
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.70 E-value=0.00032 Score=50.75 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=30.6
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
.+.|.+.||||+|++|+.+|+++|+||......
T Consensus 7 ~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~ 39 (91)
T 1zpv_A 7 IITVVGKDKSGIVAGVSGKIAELGLNIDDISQT 39 (91)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeE
Confidence 689999999999999999999999999877765
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.69 E-value=0.00027 Score=50.56 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=33.1
Q ss_pred eeeeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEee
Q 024865 185 VANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGR 221 (261)
Q Consensus 185 ~~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t 221 (261)
|...+.|.+.||||+|++|+.+|++.|+||.+..+.+
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~ 40 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNA 40 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEE
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEE
Confidence 3457899999999999999999999999999888863
No 12
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.52 E-value=0.00039 Score=56.78 Aligned_cols=66 Identities=8% Similarity=0.117 Sum_probs=51.8
Q ss_pred EEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhh
Q 024865 95 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL 166 (261)
Q Consensus 95 t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L 166 (261)
..+.|.+.|+||+|++|+++|++.|+||.+..+..+.+.+...=+|.|. + ++..++.|.+.|.+..
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~----d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--G----DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--S----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--c----cHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999998887544434666667765 2 2467778888877643
No 13
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.40 E-value=0.00062 Score=55.60 Aligned_cols=66 Identities=6% Similarity=0.114 Sum_probs=51.7
Q ss_pred EEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhh
Q 024865 95 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL 166 (261)
Q Consensus 95 t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L 166 (261)
..+.|.+.|+||+|++|+++|++.|+||.+..+..+.+.+...=+|.|. + ++..++.|.+.|.+..
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~--~----d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN--G----PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE--E----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe--c----cHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999998887544444666667765 1 2456777877777644
No 14
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.38 E-value=0.003 Score=51.82 Aligned_cols=106 Identities=20% Similarity=0.158 Sum_probs=67.7
Q ss_pred CCeEEEEE-EecCCccHHHHHHHHHHHCCceEEEEEEEEeeC---CCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 92 PGHTLVQI-VCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 92 ~~~t~l~V-~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~---g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
.+.+.|+| ..+|+||.+++|...|.++|+||.. |.+++. ++...=.|.+.. ...++..+.|.+ +.
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~--i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~ 81 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQ 81 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCE--EEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEE--EEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HH
Confidence 36788888 4699999999999999999999984 322111 112212366641 222333344444 22
Q ss_pred CCceeeeecCCCCcceeee---eeeEEEeC---CcccHHHHHHHHHHhCCceEEE
Q 024865 168 QPLRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~---t~iev~~~---DRpGLL~dI~~~l~~~~l~I~~ 216 (261)
.+... ..+.+. ..|.|.+. ++||+++++.++|++.||||..
T Consensus 82 ~~~~~--------~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ 128 (178)
T 2dtj_A 82 VQGNW--------TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 128 (178)
T ss_dssp TTTTC--------SEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred HhcCC--------CeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE
Confidence 21110 012221 36777775 8999999999999999999977
No 15
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.35 E-value=0.0014 Score=58.09 Aligned_cols=66 Identities=9% Similarity=0.117 Sum_probs=47.3
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHH
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWM 164 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~ 164 (261)
...|+|.|+||||+.++|++.|+++|+||.+..-++....+++.-...+. +.+. ...+.|+++|..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-----~~~~~L~~~f~~ 72 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-----IPLASLRTGFGV 72 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-----CCHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-----CCHHHHHHHHHH
Confidence 46899999999999999999999999999999887433444554443444 2221 134566666654
No 16
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.18 E-value=0.0023 Score=57.11 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=46.6
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHH
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWM 164 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~ 164 (261)
....|+|.|+||||+.+.|++.|+++|+||.++.-++....+++.-...+. +.+ . ...+.|+++|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~----~~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-P----FDLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-S----SCHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-C----CCHHHHHHHHHH
Confidence 346899999999999999999999999999998887432244554333333 221 1 134566666643
No 17
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.17 E-value=0.0042 Score=50.24 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=67.8
Q ss_pred CCeEEEEEEe-cCCccHHHHHHHHHHHCCceEEEEEEEEeeC---CCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 92 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 92 ~~~t~l~V~~-~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~---g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
.+.+.|+|.. +|+||.++++..+|.++|+||.. |.++.. .+..-=+|.|.. .+.++..++-+.+...+.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~-----~d~~~a~~~L~~~~~~~~ 86 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKK-----DFAQEALEALEPVLAEIG 86 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEG-----GGHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEeh-----HHHHHHHHHHHHHHHHhC
Confidence 3577787776 89999999999999999999984 432111 113333466642 111122222222333333
Q ss_pred CCceeeeecCCCCcceeeeeeeEEEeCC---cccHHHHHHHHHHhCCceEEE
Q 024865 168 QPLRVTVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~t~iev~~~D---RpGLL~dI~~~l~~~~l~I~~ 216 (261)
- .+... ..+ ..+.|.+.+ +||+++++.++|.+.|+||..
T Consensus 87 ~--~v~~~-----~~~---a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 87 G--EAILR-----PDI---AKVSIVGVGLASTPEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp C--EEEEE-----CSE---EEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCE
T ss_pred C--cEEEe-----CCE---EEEEEECCCcccCcCHHHHHHHHHHHCCCCEEE
Confidence 1 21111 011 268888876 999999999999999999954
No 18
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.11 E-value=0.0027 Score=56.28 Aligned_cols=45 Identities=11% Similarity=0.216 Sum_probs=37.7
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEE
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEI 137 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~ 137 (261)
....|+|.|+||||+.++|++.|+++|+||.++.-++...++++.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ff 50 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFF 50 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEE
Confidence 457899999999999999999999999999999887433444543
No 19
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.09 E-value=0.0032 Score=55.73 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=46.1
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHH
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 164 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~ 164 (261)
...|+|.|+||||+.++|++.|+++|+||.+..-++....+++.-...+..++ . ...+.|+++|..
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~----~~~~~L~~~f~~ 73 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-D----FDEAGFRAGLAE 73 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-S----CCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-C----CCHHHHHHHHHH
Confidence 46899999999999999999999999999998877433334543322333111 1 234667777654
No 20
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.84 E-value=0.0063 Score=50.74 Aligned_cols=67 Identities=7% Similarity=0.183 Sum_probs=49.9
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhh
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL 166 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L 166 (261)
...|.|...|+||.|++|+++|++.|+||.+-.+..+.+.+...=++.|+.+ +...++|.+.|.+..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 4689999999999999999999999999998777643454455556666521 345677777776644
No 21
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.77 E-value=0.0014 Score=52.75 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=30.9
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
.|+|.|.||+|||++|+++|+++++||..+.+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~ 34 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEID 34 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEe
Confidence 378999999999999999999999999988886
No 22
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.73 E-value=0.082 Score=46.78 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=37.2
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEE
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEI 137 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~ 137 (261)
....|+|.|+||||+.++|++.|+++|+||.++.-++....+++.
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ff 53 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFF 53 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceE
Confidence 356899999999999999999999999999998887433344543
No 23
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.52 E-value=0.012 Score=47.11 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=43.1
Q ss_pred EEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHH
Q 024865 96 LVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 164 (261)
Q Consensus 96 ~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~ 164 (261)
.|.|.|.||+||+++|+.+|+.+++||..+.+. +.| . +++.-.. .+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~--~~g-~----i~~~~~~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEID--PIG-R----IYLNFAE---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEE--TTT-E----EEEEECC---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEe--cCC-E----EEEEEEe---CCHHHHHHHHHHHHc
Confidence 578999999999999999999999999999887 556 3 3333111 223455666665554
No 24
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.45 E-value=0.034 Score=45.64 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=66.8
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHHCCceEEEEEEEEe-eC--CCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcC
Q 024865 93 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRR-QR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 168 (261)
Q Consensus 93 ~~t~l~V~-~~DrpGLla~I~~vl~~~~l~I~~AkI~t~-t~--g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~ 168 (261)
+.+.|+|. .+|+||.+++|..+|+++|+||.. |.++ +. .+..-=+|.|..+. .++..++.+.+.+.+.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~--I~q~~s~~~~g~~~isftv~~~~-----~~~a~~~L~~~~~el~- 86 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRDV-----GPAAVEKLDSLRNEIG- 86 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCC--EEECCCCTTTCEEEEEEEEETTT-----HHHHHHHHHHTHHHHC-
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEE--EEecCCcccCCccEEEEEEehhH-----HHHHHHHHHHHHHhcC-
Confidence 45666653 589999999999999999999973 3321 11 23555567775211 1122222222222221
Q ss_pred CceeeeecCCCCcceeeeeeeEEEeC---CcccHHHHHHHHHHhCCceEEEEE
Q 024865 169 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 218 (261)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~t~iev~~~---DRpGLL~dI~~~l~~~~l~I~~Ak 218 (261)
...+... ..+ ..+.|.+. ++||+.+++.++|++.||||....
T Consensus 87 ~~~v~~~-----~~v---a~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 87 FSQLLYD-----DHI---GKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CSEEEEE-----SCE---EEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cceEEEe-----CCE---EEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 1111111 011 25777665 899999999999999999996654
No 25
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.25 E-value=0.013 Score=49.75 Aligned_cols=49 Identities=10% Similarity=0.201 Sum_probs=34.7
Q ss_pred eEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeC---CCeEEEEEEE
Q 024865 94 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIM 142 (261)
Q Consensus 94 ~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~---g~~v~D~F~V 142 (261)
...|.|.+.||||+|++|+.+|++++.||...+..+... ++.+.-.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV 55 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEI 55 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEE
Confidence 357899999999999999999999999999998885431 2255444444
No 26
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=96.22 E-value=0.0069 Score=53.54 Aligned_cols=56 Identities=9% Similarity=0.065 Sum_probs=43.2
Q ss_pred eeeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc
Q 024865 186 ANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 245 (261)
Q Consensus 186 ~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~ 245 (261)
.|.|-+...|+||-||++-..|+..|||+ .||..+-...+-++ |.||| |-+|+.-.
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINL--tkIESRP~~~~~~~-Y~Ffv-D~eg~~~d 255 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDL--TKIESRPSRKKAFE-YLFYA-DFIGHRED 255 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCE--EEEEEEECSSSTTE-EEEEE-EEESCTTS
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCe--eEEEeeEcCCCCcc-eEEEE-EEecCCCc
Confidence 34555566799999999999999999999 89975555555566 57999 66676544
No 27
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.14 E-value=0.043 Score=45.92 Aligned_cols=110 Identities=16% Similarity=0.111 Sum_probs=66.3
Q ss_pred CCeEEEEEE-ecCCccHHHHHHHHHHHCCceEEEEEEEEee---CCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 92 PGHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQ---RGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 92 ~~~t~l~V~-~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t---~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
.+.+.|+|. .+|+||..++|.++|++.|+||-- |..+. .+....-+|.+.. .+......+.+.+...+.
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDm--I~Qs~s~~~~~~~~~sftv~~-----~d~~~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSR-----DVGPAAVEKLDSLRNEIG 105 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCC--EECCCCC--CCEEEEEEEEEG-----GGHHHHHHHHHTTHHHHC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEE--EeeccccccccceEEEEecch-----hhHHHHHHHHHHHHhhhc
Confidence 357788876 499999999999999999999973 43211 1224555677641 011122222222222221
Q ss_pred CCceeeeecCCCCcceeeeeeeEEEe---CCcccHHHHHHHHHHhCCceEEEE
Q 024865 168 QPLRVTVVSRGPDTELLVANPVELSG---KGRPLVFHDITLALKMLDICIFSA 217 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~t~iev~~---~DRpGLL~dI~~~l~~~~l~I~~A 217 (261)
. ..+... ..+ ..+.|.+ ..+||+.+++.++|++.||||..-
T Consensus 106 ~-~~v~~~-----~~i---akVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 106 F-SQLLYD-----DHI---GKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp C-SEEEEE-----CCE---EEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred e-eeEEEe-----cCe---eeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 1 111110 011 1455555 689999999999999999999543
No 28
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=96.05 E-value=0.011 Score=52.92 Aligned_cols=65 Identities=14% Similarity=0.167 Sum_probs=45.8
Q ss_pred eeeEEEeC-CcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc--hHHHHHHHHH
Q 024865 187 NPVELSGK-GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP--RNKIEEGVWK 255 (261)
Q Consensus 187 t~iev~~~-DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~--~~~~~~~l~~ 255 (261)
|.|-+... |+||-||++-..|+..|||+ .||..+-...+-++ |.||| |.+|+.-. .++.++.|+.
T Consensus 202 TSl~f~~~~~~pGaL~~~L~~Fa~~gINL--tkIESRP~~~~~~~-Y~Ffi-D~eg~~~d~~v~~aL~~L~~ 269 (313)
T 3mwb_A 202 TTVVVPLPEDHPGALMEILDQFASRGVNL--SRIESRPTGQYLGH-YFFSI-DADGHATDSRVADALAGLHR 269 (313)
T ss_dssp EEEEEECSSCCTTHHHHHHHHHHTTTCCE--EEEEEEECSSSTTS-EEEEE-EEESCTTSHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHCCccE--EEEEEeecCCCCcc-EEEEE-EEeCCCCcHHHHHHHHHHHH
Confidence 45656664 99999999999999999999 78965555555555 57999 66676543 2334444443
No 29
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.04 E-value=0.0094 Score=50.57 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=27.1
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEee
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGR 221 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t 221 (261)
.|+|.+.||||+|++|+++|+++++||.+....+
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~ 39 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFL 39 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEc
Confidence 5899999999999999999999999998877764
No 30
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=96.01 E-value=0.026 Score=50.89 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=38.7
Q ss_pred CcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc
Q 024865 195 GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 245 (261)
Q Consensus 195 DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~ 245 (261)
|+||-||++-..|+..|||+ .||..+-...+-++ |.||| |.+|+.-.
T Consensus 217 ~~pGaL~~~L~~Fa~~gINL--tkIESRP~~~~~~~-Y~Ffi-D~eg~~~d 263 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNM--TSFISRPIKGRTGT-YSFIV-TLDAAPWE 263 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCE--EEEEEEEETTEEEE-EEEEE-EESSCTTS
T ss_pred CCCCHHHHHHHHHHHCCcce--EEEEeeECCCCCcc-EEEEE-EEeCCcCC
Confidence 89999999999999999999 89975555566677 68998 67787554
No 31
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=95.94 E-value=0.0059 Score=54.21 Aligned_cols=33 Identities=9% Similarity=-0.112 Sum_probs=29.7
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
++.|.|+||||+++.|+..|+++|+||..+.=.
T Consensus 12 vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~ 44 (292)
T 3lou_A 12 VLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVF 44 (292)
T ss_dssp EEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEE
Confidence 699999999999999999999999999665543
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=95.90 E-value=0.019 Score=46.65 Aligned_cols=33 Identities=6% Similarity=-0.075 Sum_probs=31.0
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
.++|...||||+|++|+.+|++.|+||.+....
T Consensus 5 ~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~ 37 (164)
T 2f1f_A 5 ILSVLLENESGALSRVIGLFSQRGYNIESLTVA 37 (164)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEE
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCCeeeceee
Confidence 688999999999999999999999999988876
No 33
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=95.89 E-value=0.0068 Score=53.69 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=29.4
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEE
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEI 219 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI 219 (261)
++.|.|+||||+++.|+..|+++|+||..+.-
T Consensus 9 vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q 40 (287)
T 3nrb_A 9 VLSLACQDAPGIVSEVSTFLFNNGANIVEAEQ 40 (287)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEeeee
Confidence 69999999999999999999999999966654
No 34
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=95.89 E-value=0.0066 Score=53.80 Aligned_cols=32 Identities=19% Similarity=0.093 Sum_probs=29.3
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEE
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEI 219 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI 219 (261)
++.|.|+||||+++.|+..|+++|+||....=
T Consensus 8 iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q 39 (288)
T 3obi_A 8 VLTLSCPDRAGIVSAVSTFLFENGQNILDAQQ 39 (288)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCcEEeeee
Confidence 69999999999999999999999999966554
No 35
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=95.88 E-value=0.0068 Score=53.63 Aligned_cols=32 Identities=6% Similarity=-0.198 Sum_probs=29.2
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEE
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEI 219 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI 219 (261)
++.|.|.||||+++.|+..|+++|+||....=
T Consensus 10 vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q 41 (286)
T 3n0v_A 10 ILTADCPSMLGTVDVVTRYLFEQRCYVTEHHS 41 (286)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHCCCCeeeeee
Confidence 69999999999999999999999999965553
No 36
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.84 E-value=0.14 Score=47.43 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=67.2
Q ss_pred CeEEEEEE-ecCCccHHHHHHHHHHHCCceEEEEEEEEeeC--CCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcCC
Q 024865 93 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 169 (261)
Q Consensus 93 ~~t~l~V~-~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~--g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~~ 169 (261)
+.+.|.|. .+|+||.+++|...|.++|+||..--..+ .. .+...=+|.|.. .+.++..++.+.+...+..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~-s~~~~g~~~isf~v~~-----~~~~~a~~~l~~~~~~~~~- 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-FSVEDGTTDITFTCPR-----SDGRRAMEILKKLQVQGNW- 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC-CC--CCEEEEEEEEET-----TTHHHHHHHHHHHHTTTTC-
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC-ccccCCcceEEEEEec-----hhHHHHHHHHHHHHHHcCC-
Confidence 56788888 69999999999999999999998422222 22 223334566652 1122222222223322321
Q ss_pred ceeeeecCCCCcceeeeeeeEEEeC---CcccHHHHHHHHHHhCCceEE
Q 024865 170 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIF 215 (261)
Q Consensus 170 ~~~~~~~~~~~~~v~~~t~iev~~~---DRpGLL~dI~~~l~~~~l~I~ 215 (261)
..+... ..+ ..+.|.+. ++||+++++.++|.+.||||.
T Consensus 336 ~~v~~~-----~~~---a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 376 (421)
T 3ab4_A 336 TNVLYD-----DQV---GKVSLVGAGMKSHPGVTAEFMEALRDVNVNIE 376 (421)
T ss_dssp SEEEEE-----CCE---EEEEEECGGGTSCTTHHHHHHHHHHHTTCCCC
T ss_pred ceEEEe-----CCe---EEEEEEccCcccCccHHHHHHHHHHHCCCCEE
Confidence 111110 011 25777774 899999999999999999997
No 37
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=95.83 E-value=0.0067 Score=54.13 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=29.7
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
++.|.|+||||+++.|+..|+++|+||..+.=.
T Consensus 24 iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~ 56 (302)
T 3o1l_A 24 RLVIACPDRVGIVAKVSNFLASHNGWITEASHH 56 (302)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEE
Confidence 799999999999999999999999999665543
No 38
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=95.59 E-value=0.024 Score=49.58 Aligned_cols=50 Identities=12% Similarity=0.234 Sum_probs=39.2
Q ss_pred eeeEEEe---CCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCC
Q 024865 187 NPVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGD 240 (261)
Q Consensus 187 t~iev~~---~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~ 240 (261)
|.|-+.. .|+||-||++-..|+..|||+ .||..+-...+-++ |.||| |.+
T Consensus 187 tsl~f~~~~~~~~pGaL~~~L~~Fa~~gINL--tkIESRP~~~~~~~-Y~Ffi-D~e 239 (267)
T 2qmw_A 187 TSLMFLITPMHDKPGLLASVLNTFALFNINL--SWIESRPLKTQLGM-YRFFV-QAD 239 (267)
T ss_dssp SEEEEEEEESSCCTTHHHHHHHHHHTTTCCE--EEEEEEECSSSTTC-EEEEE-EES
T ss_pred EEEEEEcCCCCCCcChHHHHHHHHHHcCCCe--eEEEEeecCCCCcc-EEEEE-EEe
Confidence 4566666 799999999999999999999 89965555555566 57999 444
No 39
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=95.50 E-value=0.01 Score=54.57 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=29.9
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
+|.|+|+||||+++.|+..|+++|+||....-.
T Consensus 14 ~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~ 46 (415)
T 3p96_A 14 LITVTGVDQPGVTATLFEVLSRHGVELLNVEQV 46 (415)
T ss_dssp EEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeE
Confidence 799999999999999999999999999666543
No 40
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=95.06 E-value=0.012 Score=47.84 Aligned_cols=34 Identities=9% Similarity=-0.001 Sum_probs=31.3
Q ss_pred eeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 187 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 187 t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
..+.|...||||+|++|+.+|++.|+||.+.-++
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~ 38 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVA 38 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEE
Confidence 3688999999999999999999999999888876
No 41
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=94.23 E-value=0.36 Score=37.37 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=34.4
Q ss_pred EEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEE
Q 024865 95 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIM 142 (261)
Q Consensus 95 t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V 142 (261)
..+-+..+|+||.+++++++|++.|+||.....+. ..+ ...-+|.+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~-~~~~~i~~ 118 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNN-VANVVIRP 118 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETT-EEEEEEEE
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCC-cEEEEEEe
Confidence 56778899999999999999999999997555442 233 55444433
No 42
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.94 E-value=0.41 Score=45.01 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=67.6
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhh---
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL--- 166 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L--- 166 (261)
+.+.|.|.. .++||.++++..+|.++|+||.. |... .++ .-=+|.|.. +..++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~--IsQ~-tse-~~Is~~V~~--------~d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVIL--ISQG-SSE-TNISLVVSE--------EDVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEE--EEEC-CTT-CCEEEEEEG--------GGHHHHHHHHHHHHCC-
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEE--EEec-CCC-CEEEEEEec--------hHHHHHHHHHHHHHhhh
Confidence 567888885 78889999999999999999983 3311 121 222466642 12334445555555
Q ss_pred -----cCCceeeeecCCCCcceeee---eeeEEEeC---CcccHHHHHHHHHHhCCceEEE
Q 024865 167 -----LQPLRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 167 -----~~~~~~~~~~~~~~~~v~~~---t~iev~~~---DRpGLL~dI~~~l~~~~l~I~~ 216 (261)
..+... ..+.+. ..+.|.+. ++||.++++..+|.+.||||+.
T Consensus 385 ~~~~~~~~~~~--------~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 385 GKKSFLNNNLI--------RDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM 437 (473)
T ss_dssp ---CTTSCCCE--------EEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE
T ss_pred ccccccccccc--------ceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE
Confidence 221100 012221 26778875 6999999999999999999943
No 43
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.87 E-value=0.21 Score=47.59 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=45.2
Q ss_pred CCeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe
Q 024865 92 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ 143 (261)
Q Consensus 92 ~~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~ 143 (261)
+.+..+.+.-+|+||..++|+.+|.++|+||.+.++.....|+.++-++.++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd 503 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLD 503 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEES
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEEC
Confidence 4567889999999999999999999999999999998655677888777775
No 44
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.55 E-value=0.37 Score=44.39 Aligned_cols=49 Identities=6% Similarity=0.186 Sum_probs=43.1
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ 143 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~ 143 (261)
+...|.+.-+|+||.+++|+.+|.++|+||..-+.. +.|+.+.-++-|+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~--r~g~~A~~vidvD 378 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQ--TSAQMGYVVIDIE 378 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEE--ECSSEEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhcc--CCCCEEEEEEEcC
Confidence 456788999999999999999999999999988888 5787988888775
No 45
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=93.28 E-value=0.07 Score=44.40 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=30.8
Q ss_pred eeeEEEeCCcccHHHHHHHHHHhCCceEEEEEEe
Q 024865 187 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 220 (261)
Q Consensus 187 t~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~ 220 (261)
..|.|...|+||.|++|+.+|++.|+||.+--++
T Consensus 30 ~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~ 63 (193)
T 2fgc_A 30 HLVSMLVHNKPGVMRKVANLFARRGFNISSITVG 63 (193)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEE
T ss_pred EEEEEEECCCChHHHHHHHHHHHCCceEEEEEee
Confidence 4789999999999999999999999999876665
No 46
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=92.40 E-value=1.3 Score=42.88 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=69.8
Q ss_pred CCeEEEEEEec---CCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcC
Q 024865 92 PGHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 168 (261)
Q Consensus 92 ~~~t~l~V~~~---DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~ 168 (261)
.+.+.|.|.+. .+||..+++..+|.+.|+||.. |+++ . . --+|.|. ++..++..++|.+.+..
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~--istS--e-~-~Is~vI~--------~~d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEM--ISTS--E-V-KVSCVID--------QRDADRAIAALSNAFGV 418 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCE--EEEC--S-S-EEEEEEE--------GGGHHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEE--EecC--C-C-EEEEEEc--------HHHHHHHHHHHHHhhcc
Confidence 36788898875 7999999999999999999983 4432 2 2 2235554 23444555667776643
Q ss_pred Cceeeee-----cCCCCcceeee---eeeEEE-eCCcccHHHHHHHHHHhCCceEE
Q 024865 169 PLRVTVV-----SRGPDTELLVA---NPVELS-GKGRPLVFHDITLALKMLDICIF 215 (261)
Q Consensus 169 ~~~~~~~-----~~~~~~~v~~~---t~iev~-~~DRpGLL~dI~~~l~~~~l~I~ 215 (261)
....... ...+-+-|..+ ..|.|. -+|+||+.++|-..|++.||||-
T Consensus 419 ~~t~~~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vD 474 (600)
T 3l76_A 419 TLSPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVD 474 (600)
T ss_dssp CBCCCCCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCC
T ss_pred cCCCccccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEE
Confidence 3211000 00001122222 234443 47999999999999999999993
No 47
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=92.09 E-value=0.82 Score=42.70 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=68.2
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhhcC
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELLQ 168 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L~~ 168 (261)
+.+.|.|.. .+.||.+++|..+|.+++++|.. |.+ + ..-=+|.|. .+-. ...+.+.+.|.+.+..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~~---~-~~~is~~V~~~d~~-----~~~~~~~~el~~~~~~ 365 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MPS---G-VDSVSLVIEDCKLD-----GKCDKIIEEIKKQCNP 365 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BCE---E-TTEEEEEEEHHHHT-----TTHHHHHHHHHHHSCC
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--Eec---C-CCEEEEEEecchHH-----HHHHHHHHHHHHhcCC
Confidence 456788875 69999999999999999999973 432 2 112236665 2111 1234455555554431
Q ss_pred CceeeeecCCCCcceeee---eeeEEEeC---CcccHHHHHHHHHHhCCceEEEEE
Q 024865 169 PLRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFSAE 218 (261)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~---t~iev~~~---DRpGLL~dI~~~l~~~~l~I~~Ak 218 (261)
. ++.+. ..|.|.+. .+||+.+++.++|.+.||||..-.
T Consensus 366 -~-----------~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 366 -D-----------SIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -S-----------EEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -C-----------cEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 1 12221 26777775 699999999999999999996544
No 48
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=91.90 E-value=2.3 Score=41.09 Aligned_cols=108 Identities=22% Similarity=0.304 Sum_probs=67.0
Q ss_pred CCeEEEEEE-ecCCccHHHHHHHHHHHCCceEEEEEEEEe--eC---CC-eEEEEEEEecCCCCCCChhhHHHHHHHHHH
Q 024865 92 PGHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRR--QR---GN-CEIDLFIMQADGKKIVDPSKQNGLSSRLWM 164 (261)
Q Consensus 92 ~~~t~l~V~-~~DrpGLla~I~~vl~~~~l~I~~AkI~t~--t~---g~-~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~ 164 (261)
.+.+.|.|. .+|+||..++|.+.|+++|+||-- |..+ .+ |. ..-=+|.|. .+..+...+.|.+
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDm--I~q~~~~~~~~g~~~~~isftv~--------~~d~~~a~~~l~~ 511 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDM--IIQSQRCRINQGTPCRDIAFMVA--------EGDSSQAEAILQP 511 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCE--EEEEEECCCSSSSCEEEEEEEEE--------HHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEE--EEecccccccCCCccceEEEEEe--------HHHHHHHHHHHHH
Confidence 356777774 499999999999999999999952 2211 11 31 222246664 2233333333433
Q ss_pred hhcCCceeeeecCCCCcceeee---eeeEEEe---CCcccHHHHHHHHHHhCCceEEEEE
Q 024865 165 ELLQPLRVTVVSRGPDTELLVA---NPVELSG---KGRPLVFHDITLALKMLDICIFSAE 218 (261)
Q Consensus 165 ~L~~~~~~~~~~~~~~~~v~~~---t~iev~~---~DRpGLL~dI~~~l~~~~l~I~~Ak 218 (261)
+..... ..++.+. ..|.|.+ ..+||+-+++.++|++.||||..-.
T Consensus 512 -~~~~~~--------~~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 512 -LIKDWL--------DAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp -HTTTST--------TCEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred -HHHhcC--------CceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 222111 0112221 2677776 5999999999999999999995443
No 49
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=90.82 E-value=1.8 Score=38.83 Aligned_cols=54 Identities=17% Similarity=0.251 Sum_probs=39.5
Q ss_pred CeEEEEEEec--CCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeE-EEEEEEecCCCC
Q 024865 93 GHTLVQIVCQ--DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCE-IDLFIMQADGKK 148 (261)
Q Consensus 93 ~~t~l~V~~~--DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v-~D~F~V~~~g~~ 148 (261)
+.|.+.+.++ |+||-|+++-++|+.+|+|+. ||.+....+.. .=.|||+-+|..
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~ 261 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMT--SFISRPIKGRTGTYSFIVTLDAAP 261 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEE--EEEEEEETTEEEEEEEEEEESSCT
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceE--EEEeeECCCCCccEEEEEEEeCCc
Confidence 3454444454 799999999999999999998 78776654343 346888866654
No 50
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.53 E-value=0.98 Score=39.62 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=42.2
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCe-EEEEEEEecCCCC
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQADGKK 148 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~-v~D~F~V~~~g~~ 148 (261)
..|.|.+..+|+||-|+++-++|..+|+|+. ||.+....+. -.=.|+|+-+|..
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLT--KIESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTEEEEEEEEESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCee--EEEeeEcCCCCcceEEEEEEecCC
Confidence 3577777789999999999999999999998 7887665432 3456899855653
No 51
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=90.36 E-value=0.32 Score=45.17 Aligned_cols=64 Identities=14% Similarity=0.009 Sum_probs=43.1
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc--hHHHHHHHHHH
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP--RNKIEEGVWKL 256 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~--~~~~~~~l~~~ 256 (261)
.|-++..|+||-|+++-.+|+.+|||+ .||..+-...+-++ +.||| |-+ +.-. .+++++.|+..
T Consensus 36 SLiFsl~n~pGAL~~~L~~Fa~~gINL--TkIESRPsk~~~~e-Y~FfV-D~e-h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 36 SLIFSLKEEVGALAKVLRLFEENDINL--THIESRPSRLNKDE-YEFFT-YLD-KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCT--TSEEEEECSSCTTE-EEEEE-CBC-GGGHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCccHHHHHHHHHHHcCCce--EEEEeeecCCCCcc-EEEEE-EEe-eCCCHHHHHHHHHHHhh
Confidence 455555799999999999999999999 78865454444455 57999 444 3221 23445555443
No 52
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=89.89 E-value=1.1 Score=42.68 Aligned_cols=107 Identities=12% Similarity=0.108 Sum_probs=65.7
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCC-ChhhHHHHHHHHHHhhc
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIV-DPSKQNGLSSRLWMELL 167 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~-~~~~~~~l~~~L~~~L~ 167 (261)
+.+.|.|.. .++||.+++|..+|+++|+||.. |.++ . .-=+|.|. .+..... ..+.++. +.+.+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~--I~ss-e---~sis~~v~~~~~~~~~~~~~~l~~----~~~el~ 409 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDV--VATS-E---VSISLTLDPSKLWSRELIQQELDH----VVEELE 409 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEE--EEEE-T---TEEEEEECCGGGSSSCCCHHHHHH----HHHHHT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEE--EEeC-C---CeEEEEEechHhhhhhHHHHHHHH----HHHHhC
Confidence 567888885 78999999999999999999983 4432 1 11236664 2211100 1112222 333333
Q ss_pred CCceeeeecCCCCcceeeeeeeEEEeC--CcccHHHHHHHHHHhCCceEEEE
Q 024865 168 QPLRVTVVSRGPDTELLVANPVELSGK--GRPLVFHDITLALKMLDICIFSA 217 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~t~iev~~~--DRpGLL~dI~~~l~~~~l~I~~A 217 (261)
.-..+... ..+ ..|.|.+. ..||+.+++..+|.+.|+||..-
T Consensus 410 ~~~~v~~~-----~~~---a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mI 453 (510)
T 2cdq_A 410 KIAVVNLL-----KGR---AIISLIGNVQHSSLILERAFHVLYTKGVNVQMI 453 (510)
T ss_dssp TTSEEEEE-----EEE---EEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEE
T ss_pred CCCeEEEe-----CCc---EEEEEEEECCCChhHHHHHHHHHHHCCCCEEEE
Confidence 21111110 011 25777776 88999999999999999999654
No 53
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=87.54 E-value=0.95 Score=35.70 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=59.6
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhcCC
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 169 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~~~ 169 (261)
+.+.|.|.. ++.||..+++..+|+++|+||. -|.++ .. -=+|.|.. . +..+++.++|.+ .
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd--~I~~s-~~---~Isf~v~~-~------~~~~~il~~l~~----~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVD--MVATS-EV---GVSLTIDN-D------KNLPDIVRALSD----I 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCS--CEECC-SS---EEEEEESC-C------TTHHHHHHHHTT----T
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEE--EEEec-CC---EEEEEECC-h------HHHHHHHHHHhc----c
Confidence 567888874 5889999999999999999997 34422 11 22355541 1 123333333332 1
Q ss_pred ceeeeecCCCCcceeeeeeeEEEeC---CcccHHHHHHHHHHhCCceEEEEE
Q 024865 170 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 218 (261)
Q Consensus 170 ~~~~~~~~~~~~~v~~~t~iev~~~---DRpGLL~dI~~~l~~~~l~I~~Ak 218 (261)
..+.... .+ ..+.|.+. ++||+.+++..+|+ |++|..-.
T Consensus 80 ~~v~~~~-----~~---a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 GDVTVDK-----DM---VIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp EEEEEEE-----EE---EEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred CeEEEeC-----Ce---EEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 1111100 11 25777764 78999999999999 89985543
No 54
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.90 E-value=1.9 Score=39.85 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=39.8
Q ss_pred CCeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEE
Q 024865 92 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIM 142 (261)
Q Consensus 92 ~~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V 142 (261)
.+.+.|.+.-+|.||.+.+|..+|+++|+||..-.-. +.|+.+.-+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEe
Confidence 3578999999999999999999999999999965444 678777444433
No 55
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=86.66 E-value=1.9 Score=38.33 Aligned_cols=54 Identities=28% Similarity=0.469 Sum_probs=40.4
Q ss_pred CeEEEEEEec-CCccHHHHHHHHHHHCCceEEEEEEEEeeCCCe-EEEEEEEecCCCC
Q 024865 93 GHTLVQIVCQ-DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQADGKK 148 (261)
Q Consensus 93 ~~t~l~V~~~-DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~-v~D~F~V~~~g~~ 148 (261)
..|.|.+..+ |+||-|+++-++|..+|+|+. ||.+....+. -.=.|+|+-+|..
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLS--RIESRPTGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTSEEEEEEEESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEE--EEEEeecCCCCccEEEEEEEeCCC
Confidence 4677777785 999999999999999999998 7876554322 2234899855543
No 56
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=85.43 E-value=2.6 Score=36.61 Aligned_cols=49 Identities=24% Similarity=0.361 Sum_probs=38.5
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCe-EEEEEEEe
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQ 143 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~-v~D~F~V~ 143 (261)
..|.|.+.. +|+||-|+++-+.|+.+|+|+. ||.+....+. -.=.|+|+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD 237 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLS--WIESRPLKTQLGMYRFFVQ 237 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTCEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCee--EEEEeecCCCCccEEEEEE
Confidence 456666666 8999999999999999999998 7877665322 33458998
No 57
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.27 E-value=1.5 Score=40.32 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=31.6
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeeccce
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDR 227 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger 227 (261)
.+-+.-.|+||.+..|+.+|.++|+||..-...+ -|+.
T Consensus 333 rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~ 370 (404)
T 1sc6_A 333 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQM 370 (404)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSE
T ss_pred eEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCE
Confidence 4557778999999999999999999998777774 4444
No 58
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=83.48 E-value=0.84 Score=42.61 Aligned_cols=31 Identities=35% Similarity=0.277 Sum_probs=26.5
Q ss_pred eeeeEEEeCCcccHHHHHHHHHHhCCceEEE
Q 024865 186 ANPVELSGKGRPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 186 ~t~iev~~~DRpGLL~dI~~~l~~~~l~I~~ 216 (261)
..-+-+...|+||.|++|+.+|.++||+|.+
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~ 389 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDA 389 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeE
Confidence 3467788899999999999999999999954
No 59
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=82.75 E-value=2.7 Score=39.87 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=34.5
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeecccee
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDRE 228 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~ 228 (261)
.+-+.-.|+||.+..|+..|.++||||....+.+...|..+
T Consensus 456 ~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a 496 (529)
T 1ygy_A 456 NLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGA 496 (529)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCE
T ss_pred EEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEE
Confidence 56677889999999999999999999999999865555553
No 60
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=81.37 E-value=6 Score=31.28 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=30.3
Q ss_pred CCeEEEEEEecC---CccHHHHHHHHHHHCCceEEE
Q 024865 92 PGHTLVQIVCQD---HKGLLYDIMRTLKDYNIQVSY 124 (261)
Q Consensus 92 ~~~t~l~V~~~D---rpGLla~I~~vl~~~~l~I~~ 124 (261)
.+.+.+.|.+.+ +||.++++..+|.++|+||..
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 368899999977 999999999999999999986
No 61
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=78.34 E-value=7.2 Score=31.22 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=42.6
Q ss_pred CCeEEEEEEec---CCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 92 PGHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 92 ~~~t~l~V~~~---DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
.+.+.|.|.+. ++||..+++..+|.+.|+||.. |.++ .- -=.|.|. ++..++..++|.+.+.
T Consensus 93 ~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istS-e~---~Is~vV~--------~~d~~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 93 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTS-EI---RISVLIR--------EDDLDAAARALHEQFQ 157 (178)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEE-TT---EEEEEEE--------GGGHHHHHHHHHHHHT
T ss_pred CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcC-CC---eEEEEEe--------HHHHHHHHHHHHHHHc
Confidence 36788888886 8999999999999999999985 5533 32 1235553 2334444555666654
No 62
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=78.15 E-value=5 Score=37.04 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=34.1
Q ss_pred eeEEEeCCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCC
Q 024865 188 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGD 240 (261)
Q Consensus 188 ~iev~~~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~ 240 (261)
.+-+.-.|+||.|..|+.+|+++|+||..---. +-|+- .+.+.|-+
T Consensus 345 r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~-----~y~~~d~~ 390 (416)
T 3k5p_A 345 RFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEV-----GYLVMEAD 390 (416)
T ss_dssp EEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSC-----EEEEEEEC
T ss_pred EEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCce-----EEEEEEec
Confidence 688888999999999999999999999544333 44433 24455555
No 63
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=77.27 E-value=2.5 Score=39.41 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=27.5
Q ss_pred CeEEEEEEecCCccHHHHHHHHHHHCCceEEE
Q 024865 93 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSY 124 (261)
Q Consensus 93 ~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~ 124 (261)
...-+.+...|+||.|++|+++|.++|++|.+
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~ 389 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDA 389 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeE
Confidence 34567788899999999999999999999985
No 64
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=70.65 E-value=6.7 Score=36.30 Aligned_cols=51 Identities=14% Similarity=0.228 Sum_probs=39.3
Q ss_pred CCCeEEEEEEecCCccHHHHHHHHHHHCCceEEEEEEEEeeCCC-eEEEEEEEe
Q 024865 91 SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGN-CEIDLFIMQ 143 (261)
Q Consensus 91 ~~~~t~l~V~~~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~-~v~D~F~V~ 143 (261)
....|.|.+..+|+||-|+++-++|+.+|+|+. +|.+....+ .-.=.|+|+
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLT--kIESRPsk~~~~eY~FfVD 82 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLT--HIESRPSRLNKDEYEFFTY 82 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTT--SEEEEECSSCTTEEEEEEC
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceE--EEEeeecCCCCccEEEEEE
Confidence 345677878889999999999999999999998 676655432 233458887
No 65
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=68.80 E-value=5.1 Score=31.67 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.0
Q ss_pred CCeEEEEEEecC---CccHHHHHHHHHHHCCceEE
Q 024865 92 PGHTLVQIVCQD---HKGLLYDIMRTLKDYNIQVS 123 (261)
Q Consensus 92 ~~~t~l~V~~~D---rpGLla~I~~vl~~~~l~I~ 123 (261)
.+.+.+.|.+.+ +||.++++..+|.+.|+||.
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 127 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIE 127 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCC
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEE
Confidence 367889999976 99999999999999999995
No 66
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=62.31 E-value=27 Score=27.96 Aligned_cols=61 Identities=10% Similarity=0.072 Sum_probs=41.6
Q ss_pred CeEEEEEEec---CCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 93 GHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 93 ~~t~l~V~~~---DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
+...|.|.+. ++||..+++..+|.+.|+||.. |+++ .- . =+|.|. ++..++..++|.+.+.
T Consensus 95 ~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~--IstS-ei-~--Is~vV~--------~~d~~~Av~aLH~~f~ 158 (181)
T 3s1t_A 95 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIEL--ISTS-EI-R--ISVLCR--------DTELDKAVVALHEAFG 158 (181)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEE-TT-E--EEEEEE--------GGGHHHHHHHHHHHHT
T ss_pred CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEE--EEcC-CC-E--EEEEEe--------HHHHHHHHHHHHHHHc
Confidence 6788888875 8999999999999999999984 4433 22 1 124554 2333444456666653
No 67
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=53.94 E-value=5 Score=33.23 Aligned_cols=28 Identities=21% Similarity=0.139 Sum_probs=23.8
Q ss_pred eeEEEe-CCcccHHHHHHHHHHhCCceEE
Q 024865 188 PVELSG-KGRPLVFHDITLALKMLDICIF 215 (261)
Q Consensus 188 ~iev~~-~DRpGLL~dI~~~l~~~~l~I~ 215 (261)
.|.|.+ +|+||.+++|-.+|++.||||-
T Consensus 37 ~Iti~g~~~~pG~aa~IF~~La~~~InVD 65 (200)
T 4go7_X 37 KVTIVGLPDIPGYAAKVFRAVADADVNID 65 (200)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHTTCCCC
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCcceE
Confidence 455543 7999999999999999999993
No 68
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=43.75 E-value=46 Score=30.79 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=40.0
Q ss_pred eeeEEEe---CCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccchHHHHHHHHHHH
Q 024865 187 NPVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWKLL 257 (261)
Q Consensus 187 t~iev~~---~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~~~~~~~~l~~~l 257 (261)
+.|.|.+ .++||++++|..+|+++|++|..-..+ .++. ++ .|+|...+ ....++.|.+++
T Consensus 319 a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~---tse~--~I-s~~V~~~d-----~~~a~~~L~~~l 381 (473)
T 3c1m_A 319 ALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQG---SSET--NI-SLVVSEED-----VDKALKALKREF 381 (473)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEEC---CTTC--CE-EEEEEGGG-----HHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEec---CCCC--EE-EEEEechH-----HHHHHHHHHHHH
Confidence 3677876 688999999999999999999554432 1222 44 68886543 123455555555
No 69
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=42.66 E-value=69 Score=30.08 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=40.8
Q ss_pred eeeEEEe---CCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc-hHHHHHHHHHHHc
Q 024865 187 NPVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP-RNKIEEGVWKLLM 258 (261)
Q Consensus 187 t~iev~~---~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~-~~~~~~~l~~~l~ 258 (261)
+.|.|.+ .++||.+++|-.+|+++|++|..- .+ ++. ++ .|+|...+..+.. .....+.+.++|.
T Consensus 342 ~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~s---se~--si-s~~v~~~~~~~~~~~~~~l~~~~~el~ 409 (510)
T 2cdq_A 342 TMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--AT---SEV--SI-SLTLDPSKLWSRELIQQELDHVVEELE 409 (510)
T ss_dssp EEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EE---ETT--EE-EEEECCGGGSSSCCCHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--Ee---CCC--eE-EEEEechHhhhhhHHHHHHHHHHHHhC
Confidence 3678876 689999999999999999999443 32 122 33 6888544322211 1234555555553
No 70
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=39.70 E-value=18 Score=33.42 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=62.7
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhhcC
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELLQ 168 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L~~ 168 (261)
+.+.|.|.. .+.||.+++|..+|.+++++|. -|.++ . .-=+|.|. .+...-......+++.+.|.. + .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd--~i~ss-~---~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~-~ 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVD--LITTS-E---VSVALTLDTTGSTSTGDTLLTQSLLMELSA-L-C 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCS--EEEEE-T---TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-H-S
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEE--EEEeC-C---CeEEEEEeccccchhhHHHHHHHHHHHhcc-C-C
Confidence 566777776 4778999999999999999997 34432 1 11236665 222110011234556555554 1 1
Q ss_pred CceeeeecCCCCcceeeeeeeEEEeC---CcccHHHHHHHHHHhCCceEE
Q 024865 169 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIF 215 (261)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~t~iev~~~---DRpGLL~dI~~~l~~~~l~I~ 215 (261)
+.... ..+ ..+.|.+. ..||+.+++..+|.+ +||.
T Consensus 379 ~v~~~-------~~~---a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~ 416 (449)
T 2j0w_A 379 RVEVE-------EGL---ALVALIGNDLSKACGVGKEVFGVLEP--FNIR 416 (449)
T ss_dssp CEEEE-------EEE---EEEEEEESSCTTSSSHHHHHHSSCTT--SCCC
T ss_pred eEEEe-------CCe---EEEEEECCCccccccHHHHHHHHHhC--CCeE
Confidence 11110 011 26778876 689999999999976 6664
No 71
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=38.20 E-value=95 Score=28.08 Aligned_cols=61 Identities=16% Similarity=0.245 Sum_probs=41.2
Q ss_pred CeEEEEEEe---cCCccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHHHhhc
Q 024865 93 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 93 ~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
+...+.|.+ +++||..+++..+|.+.|+||. .|.++ .- .+ +|.|. .+..++..++|.+.+.
T Consensus 343 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~--~is~S-e~-~i--s~vV~--------~~d~~~Av~~Lh~~f~ 406 (421)
T 3ab4_A 343 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIE--LISTS-EI-RI--SVLIR--------EDDLDAAARALHEQFQ 406 (421)
T ss_dssp CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCC--EEEEE-TT-EE--EEEEE--------GGGHHHHHHHHHHHTT
T ss_pred CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEE--EEEcC-CC-eE--EEEEe--------HHHHHHHHHHHHHHHh
Confidence 566788887 4899999999999999999998 45533 22 22 24443 2334455566666653
No 72
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=35.10 E-value=14 Score=28.75 Aligned_cols=44 Identities=5% Similarity=0.033 Sum_probs=31.7
Q ss_pred eeEEEe---CCcccHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCC
Q 024865 188 PVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEG 239 (261)
Q Consensus 188 ~iev~~---~DRpGLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~ 239 (261)
.+.|.+ .|+||.+++|..+|++.|++|.. |.+ ++. ++ .|+|.+.
T Consensus 20 ~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~--I~~---s~~--~I-sf~v~~~ 66 (157)
T 3mah_A 20 VIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM--VAT---SEV--GV-SLTIDND 66 (157)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC--EEC---CSS--EE-EEEESCC
T ss_pred EEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE--EEe---cCC--EE-EEEECCh
Confidence 566664 48999999999999999999933 331 222 44 6888544
No 73
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=31.12 E-value=28 Score=26.80 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=21.4
Q ss_pred eCCcccHHHHHHHHHHhCCceEEE
Q 024865 193 GKGRPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 193 ~~DRpGLL~dI~~~l~~~~l~I~~ 216 (261)
+.|-.|+++.|+..|++.||+|..
T Consensus 72 ~~~~vGilA~is~pLA~agIsif~ 95 (134)
T 1zhv_A 72 AFDETGIVLSVISPLSTNGIGIFV 95 (134)
T ss_dssp CCSSCCHHHHHHHHHHTTTCCCEE
T ss_pred CccHHHHHHHHHHHHHhCCCCeEE
Confidence 458999999999999999999954
No 74
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=29.98 E-value=28 Score=26.77 Aligned_cols=25 Identities=12% Similarity=-0.126 Sum_probs=21.1
Q ss_pred EeCCcccHHHHHHHHHHhCCceEEE
Q 024865 192 SGKGRPLVFHDITLALKMLDICIFS 216 (261)
Q Consensus 192 ~~~DRpGLL~dI~~~l~~~~l~I~~ 216 (261)
.+.|=.|+++.|+..|++.||+|..
T Consensus 80 ~~l~~vGi~a~is~~LA~agIsif~ 104 (133)
T 1zvp_A 80 SSLEAVGLTAAFATKLAEHGISANV 104 (133)
T ss_dssp C--CCSCHHHHHHHHHHHTTCCCEE
T ss_pred CCccHHHHHHHHHHHHHhCCCCcEE
Confidence 4579999999999999999999954
No 75
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=27.71 E-value=1.5e+02 Score=21.14 Aligned_cols=51 Identities=14% Similarity=0.262 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHHH
Q 024865 106 GLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 163 (261)
Q Consensus 106 GLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L~ 163 (261)
.+++.+++.+ ...+||..|.|. ..++..+-.+.|.-.|. ++..++..+.|.
T Consensus 36 PiIs~l~~~~-~v~vnIL~g~I~--~i~~~~~G~L~v~l~G~----~~~~~~ai~~L~ 86 (106)
T 3dhx_A 36 PLLSETARRF-NVNNNIISAQMD--YAGGVKFGIMLTEMHGT----QQDTQAAIAWLQ 86 (106)
T ss_dssp CHHHHHHHHS-CCEEEEEEEEEE--EETTEEEEEEEEEEESC----HHHHHHHHHHHH
T ss_pred hHHHHHHHHH-CCCEEEEEEEeE--EECCeeEEEEEEEEeCC----HHHHHHHHHHHH
Confidence 4888887777 467899999999 56668999998873342 334444444444
No 76
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=25.47 E-value=1.7e+02 Score=22.26 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=26.7
Q ss_pred CeEEEEEEec---CCccHHHHHHHHHHHCCceEEEEEEE
Q 024865 93 GHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFS 128 (261)
Q Consensus 93 ~~t~l~V~~~---DrpGLla~I~~vl~~~~l~I~~AkI~ 128 (261)
++-.|.|..+ |-.|+++.+++.|++.|++|. -|+
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif--~iS 97 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIF--VVS 97 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCE--EEE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeE--EEE
Confidence 3445666554 777999999999999999998 355
No 77
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=22.69 E-value=2.3e+02 Score=20.73 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=43.4
Q ss_pred CCeEEEEEEecCCccHHHHHHHHHHHC---CceEEEEEEEEeeCCCeEEEEEEEecCCCCCCChhhHHHHHHHH
Q 024865 92 PGHTLVQIVCQDHKGLLYDIMRTLKDY---NIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRL 162 (261)
Q Consensus 92 ~~~t~l~V~~~DrpGLla~I~~vl~~~---~l~I~~AkI~t~t~g~~v~D~F~V~~~g~~l~~~~~~~~l~~~L 162 (261)
+....+.|.+.+.+++...|..++.++ +..+ .-|-+ ..|-+.-=+..|. ..+.+++..|-++|
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~S--s~GkY~Svtv~v~-----v~S~eQv~aiY~~L 99 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPS--SKGNYHSVSITIN-----ATHIEQVETLYEEL 99 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEES--SCSSEEEEEEEEC-----CSSHHHHHHHHHHH
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCC--CCCeEEEEEEEEE-----ECCHHHHHHHHHHH
Confidence 345789999999999999999999998 7777 33444 6786665455553 23445555554444
No 78
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=22.47 E-value=1.3e+02 Score=21.22 Aligned_cols=46 Identities=17% Similarity=0.071 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHhCCceEEEEEEeeeeccceeEEEEEEEEeCCCCCccc
Q 024865 198 LVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 245 (261)
Q Consensus 198 GLL~dI~~~l~~~~l~I~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~ 245 (261)
.=+..+.+.|.+.|+.+...-... ..|... ....||+.|++|+.|.
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~-~~~~~~-~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRR-FEGLIE-EHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEE-STTSTT-CEEEEEEECTTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCcccc-cCCCCC-ceEEEEEECCCCCEEE
Confidence 346778888999999986654431 112111 1124899999999886
No 79
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=22.09 E-value=1.1e+02 Score=23.34 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=27.5
Q ss_pred CCCeEEEEEEe---cCCccHHHHHHHHHHHCCceEE
Q 024865 91 SPGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVS 123 (261)
Q Consensus 91 ~~~~t~l~V~~---~DrpGLla~I~~vl~~~~l~I~ 123 (261)
..++..+.|.. .|-.|+++.+++.|++.|++|.
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif 103 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISAN 103 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCE
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcE
Confidence 34667777765 6888999999999999999998
No 80
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=21.05 E-value=2.2e+02 Score=19.90 Aligned_cols=39 Identities=13% Similarity=0.243 Sum_probs=31.1
Q ss_pred ccHHHHHHHHHHHCCceEEEEEEEEeeCCCeEEEEEEEecCC
Q 024865 105 KGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG 146 (261)
Q Consensus 105 pGLla~I~~vl~~~~l~I~~AkI~t~t~g~~v~D~F~V~~~g 146 (261)
..+++.+++.| ...+||..|+|. ..++..+-.+.|.-.|
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~--~i~~~~~G~L~v~l~G 75 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQ--QTKQGAVGSLYIQLLG 75 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEE--EETTEEEEEEEEEEES
T ss_pred chHHHHHHHHh-CCCEEEEEeece--EcCCeeEEEEEEEEEC
Confidence 46888888888 578999999999 5666888999886334
No 81
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=20.57 E-value=2.2e+02 Score=19.80 Aligned_cols=41 Identities=15% Similarity=0.010 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCceE------EEEEEeeeeccceeEEEEEEEEeCCCCCccc
Q 024865 200 FHDITLALKMLDICI------FSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 245 (261)
Q Consensus 200 L~dI~~~l~~~~l~I------~~AkI~t~t~ger~~dv~~F~i~~~~g~~l~ 245 (261)
+.++.+.|.+.|+.+ ..........|.+ .||+.|++|..+.
T Consensus 69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-----~~~~~DPdG~~ie 115 (126)
T 1ecs_A 69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGT-----MAALVDPDGTLLR 115 (126)
T ss_dssp HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccccCccccCCcccCcccE-----EEEEECCCCCEEE
Confidence 777888999999984 1222332122333 3889999999887
No 82
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=20.30 E-value=3.1e+02 Score=21.34 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHCCceEEEEEEEEeeCC-CeEEEEEEEe-cCCCCCCChhhHHHHHHHHHHhhc
Q 024865 107 LLYDIMRTLKDYNIQVSYGRFSRRQRG-NCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELL 167 (261)
Q Consensus 107 Lla~I~~vl~~~~l~I~~AkI~t~t~g-~~v~D~F~V~-~~g~~l~~~~~~~~l~~~L~~~L~ 167 (261)
+..-+..++.. |+.+.+..+. ..| .+.+-+| |+ +.| + +=+.++.+.++|...|+
T Consensus 14 v~~li~p~~~~-g~eLvdve~~--~~g~~~~LrV~-ID~~~g--i-~lddC~~vSr~is~~LD 69 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYG--KIGSDMILSIF-VDKPEG--I-TLNDTADLTEMISPVLD 69 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEE--EETTEEEEEEE-EECSSC--C-CHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHcC-CcEEEEEEEE--ecCCCcEEEEE-EECCCC--C-CHHHHHHHHHHHHHHhc
Confidence 44556667777 9999999987 443 3566554 45 444 2 24688999999999997
Done!