BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024868
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYE0|PHF1_ARATH SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2
Length = 398
Score = 357 bits (915), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 209/261 (80%), Gaps = 4/261 (1%)
Query: 5 GTVTCGSWIKRPENVNLVVLGKSSR----ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFD 60
G V CGSWI+RP+ VN V++ K+S+ + SSP++L IFSFDP T S+ +SPL T+
Sbjct: 11 GHVVCGSWIRRPKKVNWVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLK 70
Query: 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF 120
+S+GDP+ ++V+P GD FVCST+ GGCKLFE+ GGAT I +LAK++ PLQ+AG QKC++F
Sbjct: 71 DSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGATGITILAKELLPLQNAGLQKCMAF 130
Query: 121 SVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARI 180
S DGS+ A GGVDG LRIM WP+L +ILDEPKAHKS+ DMDFSLDSEFLATTSTDGSARI
Sbjct: 131 SFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARI 190
Query: 181 WKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240
WK EDG + L R+ DE IELCRFSKDGTKPFLFC QRGD ++ VYDISTW K+G K
Sbjct: 191 WKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFK 250
Query: 241 RLLRKPASVLSISLDGKYLAM 261
+L RK AS +++SLDGKY+A+
Sbjct: 251 KLSRKTASTMAVSLDGKYIAL 271
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 26/189 (13%)
Query: 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE 63
GG C ++ P NL V+ +A S ++ FS D + + ++ ++ +
Sbjct: 140 GGVDGCLRIMEWP---NLSVILDEPKAHKSIRDMD-FSLDSEFLATTSTDGSARIWKAED 195
Query: 64 GDPMTIAVNPSGDDFV---------------CSTTNGGCKLFEVYGGATDINLLAKKMPP 108
G P++ + SGD+ + C+ G + VY +T L KK+
Sbjct: 196 GFPLS-TLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFKKL-- 252
Query: 109 LQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH--KSVLDMDFSLDS 166
++ S+DG A GG DG + + ++ I + H +S+ ++F
Sbjct: 253 --SRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASLEFCPSE 310
Query: 167 EFLATTSTD 175
+ TTS++
Sbjct: 311 RVMLTTSSE 319
>sp|Q39221|STLP2_ARATH SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4
Length = 393
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYG 94
+V+ I D T S+ PL V P +AV+P +C+ N CKLF
Sbjct: 75 NVILICRVDLNTNSLSEQPLGRLVVGSDL--PYRMAVHPREGGLICALPNS-CKLFHWED 131
Query: 95 GATDINLLAKK----MPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150
+ + A + + L+D G Q L+F+ +GS AAG DG LR+ WPS+ +L+E
Sbjct: 132 IMSREDNQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNE 191
Query: 151 PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210
+AH SV + FS +FL + R+W A L++ DE CRFS D
Sbjct: 192 SQAHSSVKCLTFSESGQFLVSLGGP-VCRVWDVNASAAVASLSKEKDEMFASCRFSVDSA 250
Query: 211 KP---FLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAM 261
++ +RG + D W + K + + S ++S DGK LA+
Sbjct: 251 GNEVLYIAANTERGGSIITC--DTKLWKRKWSKPIKKNSISAFNVSADGKLLAI 302
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDG 176
+ S DG A G ++G + I+ ++ I KAH V + FS DS L + S D
Sbjct: 291 FNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDS 350
Query: 177 SARIWKTED-----GVAW 189
AR+ E GV W
Sbjct: 351 RARLTMIEQKGDKPGVRW 368
>sp|Q7ZVA0|SMU1_DANRE WD40 repeat-containing protein SMU1 OS=Danio rerio GN=smu1 PE=2
SV=1
Length = 513
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK--------SVLDMDFSLDSE 167
+C FS DG G VDG + + ++ + +I D + +VL M FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD T+
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQ 321
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D ++ + D +RI S + L E + H S V + + D + S+D
Sbjct: 312 CLSFSKDSTQILSASFDQTIRIHGLKSGK-CLKEFRGHSSFVNEATLTPDGHHAISASSD 370
Query: 176 GSARIW 181
G+ ++W
Sbjct: 371 GTVKVW 376
>sp|Q9I9H8|APAF_DANRE Apoptotic protease-activating factor 1 OS=Danio rerio GN=apaf1 PE=2
SV=1
Length = 1261
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 106 MPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD 165
M P Q A C FS DGS+ A+ G LR+ S +L+ + VL FS D
Sbjct: 613 MHPHQGAVYYAC--FSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPD 670
Query: 166 SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214
+AT ++D ++W E GV +E+I C+F+ G + L
Sbjct: 671 DRHIATCASDRKVKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLL 719
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT-- 190
DG +++ +++ D +VL D S D ATTS + +A++W + +W
Sbjct: 1072 DGTVKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKVWSS---ASWKML 1128
Query: 191 FLTRNSDEKIELCRFSKDGTK 211
FL + + CRFS D +
Sbjct: 1129 FLLEGHKDCVRSCRFSWDNKR 1149
>sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2
SV=1
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIWKTE 184
G+ ++W +
Sbjct: 371 GTVKVWNVK 379
>sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2
SV=1
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2
SV=2
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1
SV=2
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1
PE=2 SV=1
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1
Length = 513
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1
PE=2 SV=1
Length = 513
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +RI S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDSSQILSASFDQTIRIHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q6P4J8|SMU1_XENTR WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1
PE=2 SV=1
Length = 513
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD ++
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDCSQ 321
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
CLSFS D S+ + D +R+ S + L E + H S V + F+ D ++ + S+D
Sbjct: 312 CLSFSKDCSQILSASFDQTIRVHGLKSGKT-LKEFRGHSSFVNEATFTQDGHYIISASSD 370
Query: 176 GSARIW 181
G+ +IW
Sbjct: 371 GTVKIW 376
>sp|Q9WTV0|PREB_RAT Prolactin regulatory element-binding protein OS=Rattus norvegicus
GN=Preb PE=2 SV=2
Length = 417
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DGH+R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGSDGHVRVWKVPSLEKVL-EFKAHEGEIGDLALGPDGK-LVTVG 214
Query: 174 TDGSARIWKTEDGVA---WTF---LTRNSDEKIELCRFSKDGTKP--FLFCTVQRGDKAL 225
D A +W+ + V W + N+ + + CRF + +P TVQ K L
Sbjct: 215 WDFKASVWQKDQLVTQLQWQENGPTSSNTPYRYQACRFGQVPDQPGGLRLFTVQIPHKRL 274
Query: 226 -------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAM 261
L +D ST+ + + + S L++S G +L +
Sbjct: 275 RQPPPCYLTAWDSSTFLPLQTRSCGHEVISCLTVSESGTFLGL 317
>sp|Q9WUQ2|PREB_MOUSE Prolactin regulatory element-binding protein OS=Mus musculus
GN=Preb PE=1 SV=1
Length = 417
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DGH+R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGTDGHVRVWKVPSLEKVL-EFKAHEGEIGDLTLGPDGK-LVTVG 214
Query: 174 TDGSARIWKTEDGVA---WTF---LTRNSDEKIELCRFSK--DGTKPFLFCTVQRGDKAL 225
D A +W+ + V W + N+ + + CRF + D TVQ K L
Sbjct: 215 WDFKASVWQKDQLVTQLQWQENGPASSNTPYRYQACRFGQVPDQLGGLRLFTVQIPHKRL 274
Query: 226 -------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAM 261
L +D ST+ + + + S LS+S G +L +
Sbjct: 275 RQPPPCYLTAWDSSTFLPLRTRSCGHEVISCLSVSDSGTFLGL 317
>sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1
PE=1 SV=3
Length = 1249
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVY 93
P+++++ +P+T+ VY + + EGD G E
Sbjct: 561 PNIVQLGLCEPETSEVYRQAKLQA---KQEGDT-------------------GRLYLEWI 598
Query: 94 GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153
T NL + P DA C FS DG R A+ G D L++ + +LD
Sbjct: 599 NKKTIKNLSRLVVRPHTDAVYHAC--FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH 656
Query: 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213
VL FS D ++AT S D +IW + G +S E++ C F+
Sbjct: 657 EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-EQVNCCHFTNKSNHLL 715
Query: 214 L 214
L
Sbjct: 716 L 716
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 19/174 (10%)
Query: 14 KRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP 73
K ++ GK+ +SS SV++++++ YVF ++ + +
Sbjct: 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD----------YVFLQAHQETVKDFRLL 1053
Query: 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133
+ + +G K++ V G + + + L A S D ++F++ D
Sbjct: 1054 QDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCA-------ISSDATKFSSTSAD 1106
Query: 134 GHLRIMHWPSLRIILDEPKAHKSVLDMD-FSLDSEFLATTSTDGSARIWKTEDG 186
+I + L L E K H + FSLD LAT +G RIW DG
Sbjct: 1107 KTAKIWSFDLLSP-LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159
>sp|Q9HCU5|PREB_HUMAN Prolactin regulatory element-binding protein OS=Homo sapiens
GN=PREB PE=1 SV=2
Length = 417
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DG++R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGTDGYVRVWKVPSLEKVL-EFKAHEGEIEDLALGPDGK-LVTVG 214
Query: 174 TDGSARIWKTEDGVAWTFLTRN------SDEKIELCRFSKDGTKP--FLFCTVQRGDKAL 225
D A +W+ + V N + + + CRF + +P TVQ K L
Sbjct: 215 RDLKASVWQKDQLVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRL 274
Query: 226 -------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAM 261
L +D S + + K + S L +S G +L +
Sbjct: 275 RQPPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGL 317
>sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1
PE=1 SV=2
Length = 1248
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 100 NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVL 158
NL + P DA C FS DG R A+ G D L++ + +L E KAH+ VL
Sbjct: 605 NLSRLVVRPHTDAVYHAC--FSEDGQRIASCGADKTLQVFKAETGEKLL-EIKAHEDEVL 661
Query: 159 DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214
FS D F+AT S D +IW + G +S E++ C F+ L
Sbjct: 662 CCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHS-EQVNCCHFTNSSHHLLL 716
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKSVLDMD-FSLDSEFLATTSTDGS 177
S D ++F++ D +I W L + L E + H + FS+DS LAT +G
Sbjct: 1093 ISHDATKFSSTSADKTAKI--WSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGE 1150
Query: 178 ARIWKTEDG 186
RIW +G
Sbjct: 1151 IRIWNVSNG 1159
>sp|Q8K3E5|AHI1_MOUSE Jouberin OS=Mus musculus GN=Ahi1 PE=1 SV=2
Length = 1047
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 117 CLSFSVDGSRFAAGGV--DGHLRIMH-WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
CL FS +G AA DG+ I++ PS R + + + D+D+S D +L T+S
Sbjct: 464 CLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKDDRYLVTSS 523
Query: 174 TDGSARIWKTEDGVAWTF 191
+DG+AR+WK E TF
Sbjct: 524 SDGTARVWKNEINSTSTF 541
>sp|Q6DTM3|AHI1_RAT Jouberin OS=Rattus norvegicus GN=Ahi1 PE=2 SV=1
Length = 1047
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 117 CLSFSVDGSRFAAGGV--DGHLRIMHW-PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
CL FS +G AA DG+ I++ PS R + + + D+D+S D +L T+S
Sbjct: 465 CLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKDDRYLVTSS 524
Query: 174 TDGSARIWKTEDGVAWTF 191
+DG+AR+WK E TF
Sbjct: 525 SDGTARVWKNEINSTSTF 542
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 40 FSFDPKTTSVYTSPLVTYVFDESEGDPMTIA----------VNPSGDDFVCSTTNGGCKL 89
FS D + ++ +D S+ D +T+ NP GD + + + +L
Sbjct: 1309 FSADGRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARL 1368
Query: 90 FEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149
+ G + +LA +++ FS DG G D ++ W L L
Sbjct: 1369 WTTEGEC--VAVLADHQGWVREG------QFSPDGQWIVTGSADKTAQL--WNVLGKKLT 1418
Query: 150 EPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD 208
+ H+ +VL++ FS DS+++ T S DG+AR+W G L R+ ++ I FS D
Sbjct: 1419 VLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNT-GRELAVL-RHYEKNIFAAEFSAD 1476
Query: 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYL 259
G F+ V D +++I ++G R P S D +Y+
Sbjct: 1477 GQ--FI---VTASDDNTAGIWEI-VGREVGICRGHEGPVYFAQFSADSRYI 1521
Score = 40.4 bits (93), Expect = 0.013, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSA 178
+S DG DG R+ W L + H ++ FSLD + + T STD +A
Sbjct: 1227 WSPDGQHIITSSSDGTARV--WSRHGKCLGTLRGHDHNIHGARFSLDGQKIVTYSTDNTA 1284
Query: 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKI- 237
R+W T++G T L R +++ FS DG F Q + +DIS + I
Sbjct: 1285 RLW-TKEGTLLTIL-RGHQKEVYDADFSADGRFVFTVSADQTARQ-----WDISQKDTIT 1337
Query: 238 --GHKRLLR------KPASVLSISLD 255
GH +R K +L++S D
Sbjct: 1338 LTGHSHWVRNAHFNPKGDRLLTVSRD 1363
Score = 40.0 bits (92), Expect = 0.018, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131
+P G + S+++G +++ +G + L + A FS+DG +
Sbjct: 1228 SPDGQHIITSSSDGTARVWSRHGKC--LGTLRGHDHNIHGA------RFSLDGQKIVTYS 1279
Query: 132 VDGHLRIMHWPSLRIILDEPKAH-KSVLDMDFSLDSEFLATTSTDGSARIW 181
D R+ W +L + H K V D DFS D F+ T S D +AR W
Sbjct: 1280 TDNTARL--WTKEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQW 1328
Score = 36.2 bits (82), Expect = 0.24, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 63 EGDPMTIAVNPSGDD----FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118
EG + ++PS ++ + +TTNG L+ +G IN+L + L
Sbjct: 1010 EGPVTVLRISPSMENTPPLVLTATTNGIAYLWSFHGEL--INVLRGHQEAIT------AL 1061
Query: 119 SFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGS 177
+S DG FA D +++ W + + H+ V + FS +FL T+ D +
Sbjct: 1062 DWSADGQYFATASADHTVKL--WQRHGEEVATLRGHEDWVRSVHFSPHHQFLVTSGQDNT 1119
Query: 178 ARIW 181
ARIW
Sbjct: 1120 ARIW 1123
Score = 33.1 bits (74), Expect = 2.1, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL-DMDFSLDSEFLAT 171
GP FS D VD RI W L L H+S++ FS + +AT
Sbjct: 1507 GPVYFAQFSADSRYILTASVDNTARI--WDFLGRPLLTLAGHQSIVYQARFSPEGNLIAT 1564
Query: 172 TSTDGSARIW 181
S D +AR+W
Sbjct: 1565 VSADHTARLW 1574
>sp|Q9EPV5|APAF_RAT Apoptotic protease-activating factor 1 OS=Rattus norvegicus
GN=Apaf1 PE=2 SV=1
Length = 1249
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 100 NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLD 159
NL + P DA C FS DG R A+ G D L++ + +LD VL
Sbjct: 605 NLSRLVVRPHTDAVYHAC--FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLC 662
Query: 160 MDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214
FS D ++AT S D +IW + G +S E++ C F+ L
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHS-EQVNCCHFTNKSNHLLL 716
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 14 KRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP 73
K ++ GK+ +SS SV++++++ + YVF ++ + +
Sbjct: 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTEE----------YVFLQAHQETVKDFRLL 1053
Query: 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133
+ + +G K++ V G + + + L A S D ++F++ D
Sbjct: 1054 RDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCA-------ISSDATKFSSTSAD 1106
Query: 134 GHLRIMHWP-SLRIILDEPKAHKSVLDMD-FSLDSEFLATTSTDGSARIWKTEDG 186
+I W L L E K H S + FSLD LAT +G RIW DG
Sbjct: 1107 KTAKI--WSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
+SF DGS A G DG++++ H ++ P +K++ + F+ + +A+ + D
Sbjct: 1368 AVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLP-GNKAIYGISFTPQGDLIASANADK 1426
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+ +IW+ DG A L D ++ FS DG
Sbjct: 1427 TVKIWRVRDGKALKTLI-GHDNEVNKVNFSPDG 1458
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
+SFS DG A+GG D +++ ++ ++V ++ FS D + LA+ S+D S
Sbjct: 1119 VSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHS 1178
Query: 178 ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
++W T G LT +S I + RFS DG
Sbjct: 1179 IKLWDTTSGQLLMTLTGHSAGVITV-RFSPDG 1209
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
+SFS DG A+ D +R+ S +I P + V ++F+ D LA+TS D +
Sbjct: 1494 VSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKT 1553
Query: 178 ARIWKTEDG 186
++W++ DG
Sbjct: 1554 VKLWRSHDG 1562
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF 127
+ +P G + ++++ KL++ G + L + + FS DG
Sbjct: 1160 NVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVI-------TVRFSPDGQTI 1212
Query: 128 AAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV 187
AAG D +++ H +++ V + FS D + LA+ S D + ++W+ DG
Sbjct: 1213 AAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGK 1272
Query: 188 AWTFLTRNSDEKIELCRFSKDG 209
L ++D ++ FS DG
Sbjct: 1273 LVKTLKGHNDSVWDV-NFSSDG 1293
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSR 126
+T+ +P G + + KL+ G L K + QD LSFS DG
Sbjct: 1201 ITVRFSPDGQTIAAGSEDKTVKLWHRQDGK-----LLKTLNGHQDW--VNSLSFSPDGKT 1253
Query: 127 FAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIW 181
A+ D +++ +++ + SV D++FS D + +A+ S D + ++W
Sbjct: 1254 LASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG 176
+S S DG A+G +D +++ W + H+ +V + FS D + +A+ +D
Sbjct: 1078 ISISRDGQTIASGSLDKTIKL--WSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDK 1135
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+ ++W+T DG +T ++ + FS DG
Sbjct: 1136 TIKLWQTSDGTLLKTIT-GHEQTVNNVYFSPDG 1167
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
++F D + A+ +D +R+ P L L+ + V + F D +AT DG
Sbjct: 1327 AVNFLPDSNIIASASLDNTIRLWQRP-LISPLEVLAGNSGVYAVSFLHDGSIIATAGADG 1385
Query: 177 SARIWKTEDG 186
+ ++W ++DG
Sbjct: 1386 NIQLWHSQDG 1395
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
+SF+ G A+ D ++I + + V ++FS D + LA+ S D +
Sbjct: 1410 ISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNT 1469
Query: 178 ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
++W DG L ++DE + FS DG
Sbjct: 1470 VKLWNVSDGKFKKTLKGHTDE-VFWVSFSPDG 1500
>sp|Q26544|WSL17_SCHMA WD repeat-containing protein SL1-17 OS=Schistosoma mansoni PE=2
SV=1
Length = 301
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 112 AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLA 170
A P + +SFS DG A+ D +++ R+++ HK V+ +DF+ D+ L
Sbjct: 186 ATPVRSVSFSPDGRLLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLV 245
Query: 171 TTSTDGSARIW 181
T STD S RIW
Sbjct: 246 TASTDCSVRIW 256
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLL----AKKMPPLQ 110
+T +D D TIA +P F+ + ++ GC +N++ A+K +Q
Sbjct: 95 LTKTYDGDPADTWTIAFSPDSR-FLATGSHTGC-----------VNMINVQTAQKEGSIQ 142
Query: 111 DAGP-QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFL 169
G L++ DGS+ AAG ++G + I + + + A V + FS D L
Sbjct: 143 LEGKFVYXLAYISDGSKLAAGTINGLVSICDLETGSVQFLDGHA-TPVRSVSFSPDGRLL 201
Query: 170 ATTSTDGSARIWKTEDG 186
A+ S D +++ DG
Sbjct: 202 ASASDDKQIKVFDVRDG 218
>sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum
GN=pwp2 PE=3 SV=1
Length = 922
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRI--ILDEPKAHKS-VLDMDFSLDSEFLATTS 173
CL+ G AAG +D I W S+R + D H+S V ++ F + FLA+ S
Sbjct: 450 CLAVDPSGEIIAAGSLDS-FEIYVW-SVRTGRLTDILSGHQSPVCELAFDPINPFLASAS 507
Query: 174 TDGSARIWKT-EDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS 232
D S +IW ED + SD + C +S+DG K + C + +Y+ S
Sbjct: 508 WDKSCKIWNIFEDREIRESIQHTSD--VLTCAYSQDGKKFIVSCL-----DGTIQIYETS 560
Query: 233 TWNKIG 238
TW +IG
Sbjct: 561 TWGQIG 566
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193
G L + W S IL + ++ + +S D + +AT DG +IW T G + T
Sbjct: 338 GQLLVWEWRSETYILKQQGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFT 397
Query: 194 RN 195
+
Sbjct: 398 EH 399
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 18/150 (12%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSL--RIILDEPKAHKSVLDMDFSLDSEFLATTS 173
+ ++FS DG+ A+G D +R+ + R + E H VLD+ FS D +A+ S
Sbjct: 505 RAVAFSPDGALLASGSDDATVRLWDVAAAEERAVF-EGHTHY-VLDIAFSPDGSMVASGS 562
Query: 174 TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-ALLAVYDIS 232
DG+AR+W G L ++D + FS DG+ V G + + ++D++
Sbjct: 563 RDGTARLWNVATGTEHAVLKGHTD-YVYAVAFSPDGS------MVASGSRDGTIRLWDVA 615
Query: 233 TWNKIGHKRLLRKPAS---VLSISLDGKYL 259
T + + +L+ PA L+ S DG L
Sbjct: 616 TGKE---RDVLQAPAENVVSLAFSPDGSML 642
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137
F+ + N +F V G I LL ++ + + ++FS DG A G D +R
Sbjct: 313 FLATGCNRAAMVFNVETGKL-ITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIR 371
Query: 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD 197
I R+ + + +DFS D + L + S D + +W E G L ++D
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTD 429
Query: 198 EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH--KRLLRKPASVLSISL- 254
+ + FS DG F DK I W G ++L SV S++
Sbjct: 430 DGVTTVMFSPDGQ----FIAAGSLDKV------IRIWTSSGTLVEQLHGHEESVYSVAFS 479
Query: 255 -DGKYL 259
DGKYL
Sbjct: 480 PDGKYL 485
>sp|Q7ZWU5|WIPI2_XENLA WD repeat domain phosphoinositide-interacting protein 2 OS=Xenopus
laevis GN=wipi2 PE=2 SV=1
Length = 435
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDI---------NLLAKKMPPLQDAGPQKCLSFSV 122
NPSG +CS + G + Y G+ I NL A M P D+ P L+F
Sbjct: 139 NPSG---LCSLSINGENCYLAYPGSASIGEVQVFDTVNLRAANMIPAHDS-PLAALAFDA 194
Query: 123 DGSRFAAGGVDGH-LRIMHWPSLRIILDEPKAHK---SVLDMDFSLDSEFLATTSTDGSA 178
G++ A G +R+ P + + + + K S+ + FS+DS FL+ +S +
Sbjct: 195 SGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDSIFLSASSNTETV 254
Query: 179 RIWKTE 184
I+K E
Sbjct: 255 HIFKLE 260
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 44.3 bits (103), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG 176
+ FS +G FA G D ++I W +L K H+ SV + FS D E LA+TS D
Sbjct: 607 VDFSPNGKIFATAGQDQTVKI--WDLDGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDR 664
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216
+ R+W G L ++ + ++ +FS DG C
Sbjct: 665 TVRLWHWRSGKTLAVLGGHT-KSVDDAQFSPDGQTLVSVC 703
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118
F G + +P+G F + + K++++ G NLL + + QD+ +
Sbjct: 597 FTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDG-----NLL-QTLKGHQDS--VYSV 648
Query: 119 SFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSA 178
SFS DG A+ D +R+ HW S + + KSV D FS D + L + DG
Sbjct: 649 SFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQI 708
Query: 179 RIWKTEDGVAWTF 191
R+W + + F
Sbjct: 709 RLWDLDGNLIRQF 721
Score = 33.1 bits (74), Expect = 1.9, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLD-MDFSLDSEFLATTSTDG 176
L +S +G + G +G +I W +L K+ +D + S DS+++AT ++DG
Sbjct: 1044 LQYSPNGKYLLSAGREGTAKI--WSVEGQLLHTLKSDPLPIDQIAISPDSQWIATAASDG 1101
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
R+W + + F T S + L F++ G +L Q G D+ +W
Sbjct: 1102 MVRLWDQQGNLRGEF-TSTSGSLLGL-DFNRQGQ--WLLAVAQNG--------DLQSWPV 1149
Query: 237 IGHKRLLRK 245
K LR+
Sbjct: 1150 TPEKERLRQ 1158
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 41 SFDPKTTSVYTSPL--VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD 98
SFD KT ++++ Y F + + +A NP + + KL++V G +
Sbjct: 154 SFD-KTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGE-E 211
Query: 99 INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL 158
++ LA + L F+ G R G D + PS R + +
Sbjct: 212 VSTLAGHFAEIIS------LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEIS 265
Query: 159 DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELC 203
+ F+ D +AT S D S ++W E G L ++DE +++C
Sbjct: 266 CVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVC 310
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 8/153 (5%)
Query: 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK 116
+V G+ + N ++ + CK+++ GG LL L
Sbjct: 255 HVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD------ 308
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
+ F+ G A DG R+ + + + + + F+ + T S D
Sbjct: 309 -VCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDK 367
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
++R+W + G L +SDE I C F+ +G
Sbjct: 368 TSRVWCVKTGACLQVLEGHSDE-IFSCAFNYEG 399
>sp|Q74ZN0|HIR1_ASHGO Protein HIR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=HIR1 PE=3 SV=2
Length = 825
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 118 LSFSVDGSRFAAGGVDGHLRI-------------MHWPSLRIILDEPKAHKS-----VLD 159
+ S DG R A GG+DG +RI + WP+ L +P A+ S V
Sbjct: 23 VDVSSDGQRVATGGLDGKIRIWSVADILVFAKPKVSWPAREEQLRKPLANMSRHTGSVTA 82
Query: 160 MDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD 197
+ FS D+++LA+ S D IW+ E+G +D
Sbjct: 83 LKFSPDNKYLASGSDDKILLIWEKEEGAVQPLFDMEND 120
>sp|Q9W328|LST8_DROME Protein LST8 homolog OS=Drosophila melanogaster GN=CG3004 PE=2 SV=2
Length = 313
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 53 PLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDA 112
P + +FD E ++P+ + + NG L++V + ++ P DA
Sbjct: 114 PHCSRIFD-CEAPVNAACLHPNQVEIAMGSQNGSVFLWDVKSERHE------RIVPEVDA 166
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-------LRIILDEPKAHKSVLDMDFSLD 165
Q ++ S DG AA G+ I S LR P + +L FS D
Sbjct: 167 SIQD-VAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFSPD 225
Query: 166 SEFLATTSTDGSARIWKTEDGVAWTFL 192
S L TTS DG+ IWKT+D W L
Sbjct: 226 SRLLLTTSGDGTVCIWKTDDFSKWREL 252
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 58 VFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLA-KKMPPLQDAGPQK 116
+ E + +A++P G + G C ++ + ++ L + P +
Sbjct: 160 IVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILR 219
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C FS D DG + I + + V D FS DS++L T S+DG
Sbjct: 220 C-KFSPDSRLLLTTSGDGTVCIWKTDDFSKWRELCIENYWVWDAAFSADSKWLFTASSDG 278
Query: 177 SARIWKTE 184
AR+WK +
Sbjct: 279 IARLWKLQ 286
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD 111
S L VF E+ G+ ++ A +P G T+ +++EV G + L+ +
Sbjct: 631 SDLSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSG--KLLLICRG-----H 683
Query: 112 AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHK-SVLDMDFSLDSEF 168
+ + + FS DG A+ G D ++++ S+R + + H+ V + F D E
Sbjct: 684 SNWVRFVVFSPDGEILASCGADENVKLW---SVRDGVCIKTLTGHEHEVFSVAFHPDGET 740
Query: 169 LATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
LA+ S D + ++W +DG LT ++D + FS DG
Sbjct: 741 LASASGDKTIKLWDIQDGTCLQTLTGHTD-WVRCVAFSPDG 780
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF 127
++A +P G C + + +L+ G L A P ++FS D
Sbjct: 899 SVAFSPDGQTLACVSLDQSVRLWNCRTG----QCLKAWYGNTDWALP---VAFSPDRQIL 951
Query: 128 AAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV 187
A+G D +++ W + + I + + FS DS+ LA+ STD S R+W G
Sbjct: 952 ASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQ 1011
Query: 188 AWTFLTRNSD 197
+ L ++D
Sbjct: 1012 CFQILLEHTD 1021
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 69 IAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ-DAGPQKCLSFSVDGSRF 127
+A +P G+ S + KL++V G K + L+ G + ++FS DG
Sbjct: 774 VAFSPDGNTLASSAADHTIKLWDVSQG--------KCLRTLKSHTGWVRSVAFSADGQTL 825
Query: 128 AAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV 187
A+G D ++I ++ + + SV + +S DS+ L + S D + ++W + +
Sbjct: 826 ASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHI 885
Query: 188 AWTFLTRNSDEKIELCRFSKDG 209
L +++E + FS DG
Sbjct: 886 CIKTLHGHTNEVCSVA-FSPDG 906
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV 122
E + ++A +P G+ ++ + KL+++ G T + L + +C++FS
Sbjct: 726 EHEVFSVAFHPDGETLASASGDKTIKLWDIQDG-TCLQTLTGHTDWV------RCVAFSP 778
Query: 123 DGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGSARI 180
DG+ A+ D +++ W S L K+H V + FS D + LA+ S D + +I
Sbjct: 779 DGNTLASSAADHTIKL--WDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKI 836
Query: 181 WKTEDG 186
W G
Sbjct: 837 WNYHTG 842
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
+++S DG A+ D +R+ + R + V FS + E +AT STD +
Sbjct: 1068 MAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQT 1127
Query: 178 ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+IW + G LT +++ ++ FS DG
Sbjct: 1128 VKIWDWQQGKCLKTLTGHTNWVFDIA-FSPDG 1158
>sp|Q8N157|AHI1_HUMAN Jouberin OS=Homo sapiens GN=AHI1 PE=1 SV=1
Length = 1196
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 117 CLSFSVDGSRFAAG--GVDGHLRIMHW-PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
CL FS +G AA DG+ I++ PS R + + + D+ +S D ++ T+S
Sbjct: 614 CLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTSS 673
Query: 174 TDGSARIWKTEDGVAWTF 191
+DG+ARIWK E TF
Sbjct: 674 SDGTARIWKNEINNTNTF 691
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C F+ G+ A+G D +RI + I P V + F+ D +LA+ S DG
Sbjct: 195 CCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDG 254
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
RIW + G L I +FS +G
Sbjct: 255 IVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNG 287
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 141 WPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK 199
WP+ +++ + P AHK S+ + FS D ++ + S D S +IW+ + T + +
Sbjct: 93 WPTYKLVAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLM----GHR 148
Query: 200 IELCRFS-KDGTKPFLFCTVQRGDKALLAVYDIST 233
+ + FS +K + C+ D L+ V+D+S+
Sbjct: 149 LGINEFSWSSDSKLIVSCS----DDKLVKVFDVSS 179
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-----LRIILDEPKAHKSVLDMDFSLDSEF 168
P + F+ DG+ A+G DG +RI W S ++ ++DE H + + FS + ++
Sbjct: 234 PVSSVCFNRDGAYLASGSYDGIVRI--WDSTTGTCVKTLIDE--EHPPITHVKFSPNGKY 289
Query: 169 LATTSTDGSARIW 181
+ ++ + + ++W
Sbjct: 290 ILASNLNNTLKLW 302
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 7/146 (4%)
Query: 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK 116
+ F + + +A NP + + KL+++ G + L +
Sbjct: 171 HTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIIS------ 224
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
LSF+ G R G D + + PS R I + F+ D +AT S D
Sbjct: 225 -LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDK 283
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIEL 202
S ++W + +G LT + DE +++
Sbjct: 284 SCKLWDSLNGKCVATLTGHEDEVLDV 309
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 40 FSFDPKTTSVYTSPLVTY--VFDESEGDP-----------MTIAVNPSGDDFVCSTTNGG 86
+F+P++T + T + T ++D G+ ++++ N +GD + + +
Sbjct: 183 LAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHT 242
Query: 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-- 144
++E+ G L+ + G F+ D S A +D ++ W SL
Sbjct: 243 VSVWEIPSGRRIHTLIGHR-------GEISSAQFNWDCSLIATASMDKSCKL--WDSLNG 293
Query: 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCR 204
+ + VLD+ F + +AT S DG+AR++ L + E ++C
Sbjct: 294 KCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKIC- 352
Query: 205 FSKDGTK 211
F+ G +
Sbjct: 353 FNAQGNR 359
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI 146
CKL++ G L + L ++F G A DG R+ S +
Sbjct: 285 CKLWDSLNGKCVATLTGHEDEVLD-------VTFDSTGQLVATASADGTARVYSASSRKC 337
Query: 147 ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFS 206
+ + + F+ + T S+D ++R+W G L ++DE I C F+
Sbjct: 338 LAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDE-IFSCAFN 396
Query: 207 KDG 209
+G
Sbjct: 397 YEG 399
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 146 IILDEPKAHKSVLDMDFSLDSEFLATTST-DGSARIWKTEDGVAWTFLTRNSDEKIELCR 204
I+++ P A S+ D+ FS +F+ + S+ DG RIW ++GV S + R
Sbjct: 29 IVINSP-AEDSISDIAFSPQQDFMFSASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTR 87
Query: 205 FSKDGTKPFLFCTVQRGDKALLAVYDIST 233
+S DGTK G L +YDI++
Sbjct: 88 WSNDGTK-----VASGGCDNALKLYDIAS 111
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 7/157 (4%)
Query: 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK 116
+ F ++ A +P + V +NG L+E+ D N++ + Q+
Sbjct: 248 HYFMQNSATVRCAAFHPESNLLVAGFSNGIFGLYEM----PDFNMI-HTLSISQNEIDFV 302
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
++ S + F A + G L + W S IL + S+ + +S D + + T + DG
Sbjct: 303 TINKSGEWLAFGASKL-GQLLVWEWQSESYILKQQGHFDSMNSLVYSPDGQRIVTVADDG 361
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213
++W TE G T ++ I C FSK G F
Sbjct: 362 KIKVWDTESGFCIVTFTEHT-SGITACEFSKKGNVLF 397
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 69 IAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA 128
+AV+PSG+ G F+++ + L ++ + GP L+F+ +G
Sbjct: 430 MAVDPSGEIVAA----GSVDSFDIHIWSVQTGQLLDRLSGHE--GPVSSLAFAPNGGLLV 483
Query: 129 AGGVDGHLRIMHWPSL-RIILDEP-KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG 186
+G D RI W R EP + + VLD+ F DS +A ++ DG+ W +
Sbjct: 484 SGSWDRTARI--WSIFNRTQTSEPLQLNSDVLDIAFRPDSLQIAISTLDGNLSFWSVSEA 541
Query: 187 VAWTFLTRNSD-------------------EKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
L D + R+S DG+ C + G+ +
Sbjct: 542 EQQAGLDGRRDVSGGRKIGDRRTAANVAGTKAFNTIRYSTDGS-----CLLAGGNSKYIC 596
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDG 256
+Y ++T LL+K +++S+ G
Sbjct: 597 LYSVTT------MVLLKKYTVSVNLSIQG 619
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHK-SVLDMDFSLDSEFLA 170
GP L+FS +G A G DG R++ W +++ E K H +V + FS D E LA
Sbjct: 670 GPIHSLTFSPNGRFLATGATDG--RVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 727
Query: 171 TTSTDGSARIW 181
+ S D + R+W
Sbjct: 728 SGSMDNTVRLW 738
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLR---IMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLAT 171
C F + + A G D +R +++ +RI HK + + FS + FLAT
Sbjct: 631 NCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF----TGHKGPIHSLTFSPNGRFLAT 686
Query: 172 TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+TDG +W G+ L ++D L RFS+DG
Sbjct: 687 GATDGRVLLWDIGHGLMVGELKGHTDTVCSL-RFSRDG 723
>sp|Q6ZMW3|EMAL6_HUMAN Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens
GN=EML6 PE=2 SV=2
Length = 1958
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV 122
EG+ +A +PS D F+ ++ +G +++++ D LL K + +C ++S
Sbjct: 1687 EGEIWGLATHPSKDLFISASNDGTARIWDL----ADKKLLNK----VSLGHAARCAAYSP 1738
Query: 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWK 182
DG A G +G I+ SL++ + ++ D+ S D+ FLA S++ + +
Sbjct: 1739 DGEMVAIGMKNGEFVILLVNSLKVWGKKRDRKSAIQDIRISPDNRFLAVGSSEHTVDFYD 1798
Query: 183 TEDG 186
G
Sbjct: 1799 LTQG 1802
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV 122
EG+ +A++P V + + +L+ + D L+A+ +++A + ++FS
Sbjct: 325 EGELWALALHPKKPLAVTGSDDRSVRLWSL----ADHALIAR--CNMEEA--VRSVAFSP 376
Query: 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIW 181
DGS+ A G DG ++ + ++ + + +M FS D +LA S DG ++
Sbjct: 377 DGSQLALGMKDGSFIVLRVRDMTEVVHIKDRKEVIHEMKFSPDGSYLAVGSNDGPVDVY 435
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 51 TSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ 110
+ P+ V EG+ +A +P +C+T + K ++ + +LA + L+
Sbjct: 986 SGPMTLLVQGHMEGEVWGLAAHPLLP--ICATVSDD-KTLRIWELSAQHRMLAVR--KLK 1040
Query: 111 DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS-EFL 169
G +C +FS DG A G DG +++ ++ ++ + + D+ FS D+ ++L
Sbjct: 1041 KGG--RCCAFSPDGKALAVGLNDGSFLVVNADTVEDMVSFHHRKEMISDIKFSKDTGKYL 1098
Query: 170 ATTSTDGSARIW 181
A S D I+
Sbjct: 1099 AVASHDNFVDIY 1110
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAH-KSVLDMDFSLDSEFLA 170
GP L+FS +G A G DG R++ W +++ E K H +V + FS D E LA
Sbjct: 671 GPIHSLTFSPNGRFLATGATDG--RVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 728
Query: 171 TTSTDGSARIW 181
+ S D + R+W
Sbjct: 729 SGSMDNTVRLW 739
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLR---IMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLAT 171
C + + + A G D +R +++ +RI HK + + FS + FLAT
Sbjct: 632 NCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIF----TGHKGPIHSLTFSPNGRFLAT 687
Query: 172 TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+TDG +W G+ L ++D L RFS+DG
Sbjct: 688 GATDGRVLLWDIGHGLMVGELKGHTDTVCSL-RFSRDG 724
>sp|Q6ZPG2|WDR90_MOUSE WD repeat-containing protein 90 OS=Mus musculus GN=Wdr90 PE=1 SV=2
Length = 1874
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATT 172
GP +SFS DG R + GHL + PS + VL + + +AT
Sbjct: 721 GPVSSVSFSPDGLRVLSTTTSGHLGFLDVPSREYTVLARSHMAPVLALSTEPNRGQMATV 780
Query: 173 STDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS 232
S D + RIW D L S + C + T P FC G A+ + S
Sbjct: 781 SLDHTVRIW---DLATLQQLYDFSSSEDTPCAVAFHPTMPNFFCGFSSG--AVRSFSLES 835
Query: 233 TWNKIGHKRLLRKPASVLSISLDGKYL 259
+ + H R R + L I+LDG++L
Sbjct: 836 SGVLVEHTR-HRGAITSLVITLDGRFL 861
>sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associated protein-like 6 OS=Mus musculus
GN=Eml6 PE=2 SV=1
Length = 1958
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV 122
EG+ +A +PS D F+ ++ +G +++++ D LL K + +C ++S
Sbjct: 1687 EGEIWGLATHPSKDMFISASNDGTARIWDL----ADKKLLNK----VNLGHAARCAAYSP 1738
Query: 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWK 182
DG A G +G I+ +L++ + ++ D+ S D+ FLA S++ + +
Sbjct: 1739 DGEMVAIGMKNGEFVILLVNTLKVWGKKRDRKSAIQDIRISPDNRFLAVGSSEQTVDFYD 1798
Query: 183 TEDGVA 188
G +
Sbjct: 1799 LTQGTS 1804
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV 122
EG+ +A++P V + + +L+ + D L+A+ +++A + +SFS
Sbjct: 325 EGELWALALHPKKPLAVTGSDDRSVRLWSL----ADHALIAR--CNMEEA--VRSVSFSP 376
Query: 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIW 181
DGS+ A G DG ++ + ++ + + +M FS D +LA S DG ++
Sbjct: 377 DGSQLALGMKDGSFIVLRVRDMTEVVHIKDRKEVIHEMKFSPDGSYLAVGSNDGPVDVY 435
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 51 TSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ 110
+ P+ V EG+ +A +P +C+T + K ++ ++ +LA + L+
Sbjct: 986 SGPMTLLVQGHMEGEVWGLAAHPLLP--ICATVSDD-KTLRIWELSSQHRMLAVR--KLK 1040
Query: 111 DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS-EFL 169
G +C +FS DG A G DG +++ ++ +L + + D+ FS D+ ++L
Sbjct: 1041 KGG--RCCAFSPDGKALAVGLNDGSFLVVNADTVEDMLSFHHRKEMISDIKFSKDTGKYL 1098
Query: 170 ATTSTDGSARIW 181
A S D I+
Sbjct: 1099 AVASHDNFVDIY 1110
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 102 LAKKMPPLQDAGPQ-KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP----KAHK- 155
+ K + L D G C +FS S A +D +R+ SLR + P K H
Sbjct: 1 MVKLIHTLADHGDDVNCCAFSF--SLLATCSLDKTIRLY---SLRDFTELPHSPLKFHTY 55
Query: 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210
+V FS LA+ STDG+ +W TE+G + + S + +C+FS D T
Sbjct: 56 AVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDST 110
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 12/148 (8%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131
+PSG +T+G L+ G +LA P P + FS D + A+G
Sbjct: 63 SPSGHILASCSTDGTTVLWNTENG----QMLAVMEQP--SGSPVRVCQFSPDSTCLASGA 116
Query: 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF 191
DG + + + S ++ S+ FS + F T S+ G +W +D +
Sbjct: 117 ADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVW--DDKMRCPH 174
Query: 192 LTRNSDEKIELCRFS----KDGTKPFLF 215
+ D I C FS DG + F
Sbjct: 175 SEKAHDLGITCCDFSSQPVSDGEQGLQF 202
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ S +G D +RI + I P V + F+ D +A+ S DG
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
RIW T +G L + + + +FS +G
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAFVKFSPNG 268
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131
NP V + + ++++V G + K +P D P +SF+ DGS A+G
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTG-----MCIKTLPAHSD--PVSAVSFNRDGSLIASGS 232
Query: 132 VDGHLRI---MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA 188
DG +RI + ++ ++D+ + V + FS + +++ ++ D + ++W G
Sbjct: 233 YDGLVRIWDTANGQCIKTLVDD--ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK- 289
Query: 189 WTFLTRNSDEKIELCRFSK 207
T E + C F+
Sbjct: 290 -TLKQYTGHENSKYCIFAN 307
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHW-PSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
+ FS G+ A+ D +R+ W P R E KAH + V +DFS D +FLAT S D
Sbjct: 66 VQFSPHGNLLASASRDRTVRL--WIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASED 123
Query: 176 GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
S ++W L R++ + +FS DG
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHT-HWVRCAKFSPDG 156
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118
F +S G + NPSG + ++ K+++V +N L + +G C+
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR-----VNKLLQHYQ--VHSGGVNCI 234
Query: 119 SFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSA 178
SF G+ DG L+I+ R+I V + FS E A+ D
Sbjct: 235 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 294
Query: 179 RIWKT 183
+W+T
Sbjct: 295 LLWRT 299
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHW-PSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTD 175
+ FS G+ A+ D +R+ W P R E KAH + V +DFS D +FLAT S D
Sbjct: 66 VQFSPHGNLLASASRDRTVRL--WIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASED 123
Query: 176 GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
S ++W L R++ + +FS DG
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHT-HWVRCAKFSPDG 156
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118
F +S G + NPSG + ++ K+++V +N L + +G C+
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR-----VNKLLQHYQV--HSGGVNCI 234
Query: 119 SFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSA 178
SF + DG L+I+ R+I V + FS E A+ D
Sbjct: 235 SFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 294
Query: 179 RIWKT 183
+W+T
Sbjct: 295 LLWRT 299
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 7/146 (4%)
Query: 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK 116
+ F + + + NP + + KL+++ G + L +
Sbjct: 171 HTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIIS------ 224
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
LSF+ G R G D + + PS R I + F+ D +AT S D
Sbjct: 225 -LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDK 283
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIEL 202
S ++W + +G LT + DE +++
Sbjct: 284 SCKLWDSLNGKCVATLTGHDDEVLDV 309
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 42 FDPKTTSVYTSPLVTY--VFDESEGDP-----------MTIAVNPSGDDFVCSTTNGGCK 88
F+P++T + T + T ++D G+ ++++ N +GD + + +
Sbjct: 185 FNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVS 244
Query: 89 LFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL--RI 146
++E+ G L+ + G F+ D S A +D ++ W SL +
Sbjct: 245 VWEIPSGRRIHTLIGHR-------GEISSAQFNWDCSLIATASMDKSCKL--WDSLNGKC 295
Query: 147 ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFS 206
+ VLD+ F + +AT S DG+AR++ L + E ++C F+
Sbjct: 296 VATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKIC-FN 354
Query: 207 KDGTK 211
G +
Sbjct: 355 AQGNR 359
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
++F G A DG R+ S + + + + F+ + T S+D +
Sbjct: 309 VTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKT 368
Query: 178 ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+R+W G L ++DE I C F+ +G
Sbjct: 369 SRLWDPHTGECLQVLKGHTDE-IFSCAFNYEG 399
>sp|P87177|YB1C_SCHPO Uncharacterized WD repeat-containing protein C3D6.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC3D6.12 PE=1 SV=1
Length = 922
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
+ S DG AA +D +++ + SL+ L+ VL MD S DS+ L T S D
Sbjct: 539 AVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADK 598
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220
+ +IW + G + + D +E+ F D T F C+ R
Sbjct: 599 NVKIWGLDFGDCHKSIFAHQDSIMEVT-FQPD-TYNFFTCSKDR 640
>sp|Q29HG9|LST8_DROPS Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15597 PE=3 SV=1
Length = 315
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 53 PLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDA 112
P + VFD E ++P+ + + NG L++V + + P DA
Sbjct: 112 PHCSRVFD-CESPVNAACLHPNQVEIGMGSQNGNVFLWDVKSEKHEC------IVPEVDA 164
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHW-----PSLRIILDEP----KAH-KSVLDMDF 162
Q ++ S DG AA G+ I W P ++ P +AH + +L F
Sbjct: 165 SIQD-VAISPDGHYLAAANNKGNCYI--WSLCSSPDQKMSTMRPTKKIQAHTRYILRCKF 221
Query: 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFL 192
S DS L TTS DG+A +WKT D W L
Sbjct: 222 SPDSRLLLTTSGDGTACLWKTSDFSKWREL 251
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 157 VLDMDFSLDSEFLATTSTDGSARIWKTE 184
V D FS DS++L T S+DG AR+WK E
Sbjct: 258 VWDAAFSADSKWLFTASSDGVARLWKLE 285
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 49 VYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPP 108
++ P + F G + P G S+T+ L+ ++N A+ +
Sbjct: 4 LFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILW-------NLNQAARCIRF 56
Query: 109 LQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH-KSVLDMDFSLDSE 167
+ P +++S G+ A+ G D ++I P LR + E AH K+V +DF
Sbjct: 57 ASHSAPVNGVAWSPKGNLVASAGHDRTVKIWE-PKLRGVSGEFVAHSKAVRSVDFDSTGH 115
Query: 168 FLATTSTDGSARIWK 182
+ T S D SA+IW+
Sbjct: 116 LMLTASDDKSAKIWR 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,733,183
Number of Sequences: 539616
Number of extensions: 4456840
Number of successful extensions: 11507
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 10514
Number of HSP's gapped (non-prelim): 1094
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)