Query 024871
Match_columns 261
No_of_seqs 115 out of 1072
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:52:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tpf_A Otcase, ornithine carba 100.0 2.3E-95 8E-100 663.8 27.8 259 1-260 39-302 (307)
2 1pvv_A Otcase, ornithine carba 100.0 5.7E-95 2E-99 663.6 27.5 259 1-260 49-311 (315)
3 2i6u_A Otcase, ornithine carba 100.0 6.1E-95 2.1E-99 661.3 26.0 260 1-261 42-306 (307)
4 3gd5_A Otcase, ornithine carba 100.0 1.6E-94 5.5E-99 661.5 26.2 259 1-260 51-313 (323)
5 4f2g_A Otcase 1, ornithine car 100.0 4.3E-95 1.5E-99 662.5 21.4 257 1-260 48-304 (309)
6 1vlv_A Otcase, ornithine carba 100.0 7E-94 2.4E-98 658.1 29.3 258 1-259 61-324 (325)
7 4ep1_A Otcase, ornithine carba 100.0 5.7E-94 2E-98 660.9 27.9 258 1-260 73-334 (340)
8 2ef0_A Ornithine carbamoyltran 100.0 4E-94 1.4E-98 654.0 26.3 254 1-260 48-301 (301)
9 4a8t_A Putrescine carbamoyltra 100.0 2.4E-93 8.2E-98 657.5 28.8 258 1-260 66-332 (339)
10 1duv_G Octase-1, ornithine tra 100.0 3.5E-93 1.2E-97 655.4 28.6 260 1-261 47-333 (333)
11 1dxh_A Ornithine carbamoyltran 100.0 2.8E-93 9.6E-98 656.5 27.7 259 1-260 48-333 (335)
12 1oth_A Protein (ornithine tran 100.0 7.1E-93 2.4E-97 650.9 30.3 258 1-260 49-310 (321)
13 3grf_A Ornithine carbamoyltran 100.0 2E-93 6.8E-98 656.2 24.7 258 1-260 47-323 (328)
14 4a8p_A Putrescine carbamoyltra 100.0 5.3E-93 1.8E-97 657.8 27.4 258 1-260 44-310 (355)
15 4amu_A Ornithine carbamoyltran 100.0 1.4E-92 4.7E-97 657.1 27.0 259 1-260 74-364 (365)
16 2w37_A Ornithine carbamoyltran 100.0 3.5E-92 1.2E-96 652.6 28.8 258 1-260 70-352 (359)
17 3sds_A Ornithine carbamoyltran 100.0 5.3E-91 1.8E-95 644.9 29.8 257 1-259 69-346 (353)
18 1ml4_A Aspartate transcarbamoy 100.0 5.5E-90 1.9E-94 628.9 28.8 255 1-261 47-307 (308)
19 4h31_A Otcase, ornithine carba 100.0 5.7E-90 2E-94 640.8 29.0 260 1-261 73-358 (358)
20 1zq6_A Otcase, ornithine carba 100.0 2.3E-89 7.9E-94 634.3 28.3 257 1-260 61-355 (359)
21 4ekn_B Aspartate carbamoyltran 100.0 4E-89 1.4E-93 622.7 29.4 252 1-260 43-301 (306)
22 1pg5_A Aspartate carbamoyltran 100.0 3.3E-89 1.1E-93 621.5 28.4 252 1-261 41-299 (299)
23 3csu_A Protein (aspartate carb 100.0 3.6E-89 1.2E-93 623.7 24.7 253 1-260 44-305 (310)
24 3r7f_A Aspartate carbamoyltran 100.0 2.2E-88 7.6E-93 616.6 22.2 248 1-260 39-290 (304)
25 3d6n_B Aspartate carbamoyltran 100.0 2.8E-88 9.6E-93 612.7 20.3 246 3-260 39-291 (291)
26 1js1_X Transcarbamylase; alpha 100.0 2.3E-87 8E-92 613.9 21.4 246 1-260 39-315 (324)
27 3q98_A Transcarbamylase; rossm 100.0 1.7E-86 5.8E-91 623.4 23.4 257 2-259 67-379 (399)
28 2yfk_A Aspartate/ornithine car 100.0 4.3E-85 1.5E-89 616.2 22.0 257 2-259 64-376 (418)
29 3kzn_A Aotcase, N-acetylornith 100.0 2.2E-82 7.6E-87 590.9 29.8 257 1-260 61-355 (359)
30 3h9u_A Adenosylhomocysteinase; 98.5 9.1E-07 3.1E-11 83.7 13.6 132 73-233 170-309 (436)
31 2o4c_A Erythronate-4-phosphate 97.8 0.0001 3.6E-09 68.6 10.5 129 70-220 76-207 (380)
32 3ond_A Adenosylhomocysteinase; 97.6 0.00071 2.4E-08 64.8 13.8 129 73-231 224-361 (488)
33 3jtm_A Formate dehydrogenase, 97.6 0.00095 3.3E-08 61.4 13.8 103 69-180 103-228 (351)
34 4g2n_A D-isomer specific 2-hyd 97.4 0.0017 5.7E-08 59.6 12.5 93 104-219 170-262 (345)
35 3n58_A Adenosylhomocysteinase; 97.3 0.0059 2E-07 57.9 15.5 131 74-234 207-346 (464)
36 1v8b_A Adenosylhomocysteinase; 97.3 0.0031 1.1E-07 60.3 13.5 106 88-221 239-345 (479)
37 3k5p_A D-3-phosphoglycerate de 97.2 0.0033 1.1E-07 59.0 12.1 99 69-180 97-216 (416)
38 3oet_A Erythronate-4-phosphate 97.2 0.0017 5.8E-08 60.4 9.7 129 69-219 78-209 (381)
39 2ekl_A D-3-phosphoglycerate de 97.1 0.004 1.4E-07 56.1 11.7 100 70-180 86-204 (313)
40 3gg9_A D-3-phosphoglycerate de 97.1 0.0055 1.9E-07 56.2 12.4 95 104-220 157-251 (352)
41 2g76_A 3-PGDH, D-3-phosphoglyc 97.1 0.0058 2E-07 55.7 12.4 99 71-180 108-227 (335)
42 4e5n_A Thermostable phosphite 97.0 0.0072 2.5E-07 54.9 12.4 102 69-180 84-208 (330)
43 3pp8_A Glyoxylate/hydroxypyruv 97.0 0.0037 1.3E-07 56.5 10.3 96 72-180 84-201 (315)
44 4dgs_A Dehydrogenase; structur 97.0 0.011 3.8E-07 54.0 13.2 123 69-220 110-258 (340)
45 1sc6_A PGDH, D-3-phosphoglycer 96.9 0.011 3.8E-07 55.2 13.0 98 69-179 86-204 (404)
46 3d64_A Adenosylhomocysteinase; 96.9 0.019 6.4E-07 55.1 14.8 95 101-221 270-365 (494)
47 3d4o_A Dipicolinate synthase s 96.9 0.014 4.6E-07 51.7 12.7 128 69-220 111-244 (293)
48 4hy3_A Phosphoglycerate oxidor 96.9 0.011 3.9E-07 54.5 12.4 92 105-219 174-265 (365)
49 3hg7_A D-isomer specific 2-hyd 96.8 0.0052 1.8E-07 55.8 9.6 66 104-180 137-202 (324)
50 2nac_A NAD-dependent formate d 96.8 0.015 5.1E-07 54.2 12.8 67 104-179 188-254 (393)
51 2j6i_A Formate dehydrogenase; 96.8 0.01 3.5E-07 54.6 11.4 68 104-180 161-229 (364)
52 1mx3_A CTBP1, C-terminal bindi 96.8 0.014 4.7E-07 53.5 12.1 66 104-179 165-230 (347)
53 3gvp_A Adenosylhomocysteinase 96.7 0.071 2.4E-06 50.3 16.6 130 74-233 180-318 (435)
54 2w2k_A D-mandelate dehydrogena 96.7 0.029 1E-06 51.1 13.4 68 104-180 160-228 (348)
55 1qp8_A Formate dehydrogenase; 96.6 0.012 4E-07 52.8 10.5 92 74-180 71-182 (303)
56 3kb6_A D-lactate dehydrogenase 96.6 0.016 5.4E-07 52.7 10.9 99 104-229 138-236 (334)
57 3gvx_A Glycerate dehydrogenase 96.5 0.0073 2.5E-07 54.0 8.3 90 104-219 119-208 (290)
58 1gdh_A D-glycerate dehydrogena 96.5 0.03 1E-06 50.5 12.4 67 104-180 143-210 (320)
59 3evt_A Phosphoglycerate dehydr 96.5 0.011 3.9E-07 53.5 9.4 66 104-180 134-199 (324)
60 2pi1_A D-lactate dehydrogenase 96.5 0.0076 2.6E-07 54.8 8.3 125 69-220 81-230 (334)
61 2yq5_A D-isomer specific 2-hyd 96.4 0.014 4.7E-07 53.4 9.5 182 4-219 5-235 (343)
62 2dbq_A Glyoxylate reductase; D 96.4 0.079 2.7E-06 47.9 14.4 66 104-180 147-212 (334)
63 1wwk_A Phosphoglycerate dehydr 96.4 0.015 5.1E-07 52.1 9.5 66 104-180 139-204 (307)
64 2gcg_A Glyoxylate reductase/hy 96.4 0.023 7.8E-07 51.3 10.8 67 104-180 152-218 (330)
65 3ba1_A HPPR, hydroxyphenylpyru 96.3 0.04 1.4E-06 50.0 12.2 63 104-180 161-223 (333)
66 2cuk_A Glycerate dehydrogenase 96.3 0.024 8.3E-07 50.9 10.6 60 104-179 141-200 (311)
67 2rir_A Dipicolinate synthase, 96.1 0.14 4.9E-06 45.1 14.3 130 64-220 108-246 (300)
68 1ygy_A PGDH, D-3-phosphoglycer 95.9 0.1 3.6E-06 50.1 13.2 100 70-180 84-204 (529)
69 1vl6_A Malate oxidoreductase; 95.8 0.045 1.5E-06 50.9 9.8 164 43-232 121-304 (388)
70 1dxy_A D-2-hydroxyisocaproate 95.7 0.087 3E-06 47.7 11.4 64 104-180 142-205 (333)
71 1xdw_A NAD+-dependent (R)-2-hy 95.6 0.12 4.1E-06 46.7 12.0 91 105-220 144-234 (331)
72 1a4i_A Methylenetetrahydrofola 95.6 0.059 2E-06 48.4 9.6 160 15-220 55-237 (301)
73 2c2x_A Methylenetetrahydrofola 95.6 0.1 3.5E-06 46.4 10.9 159 16-220 53-232 (281)
74 1j4a_A D-LDH, D-lactate dehydr 95.5 0.099 3.4E-06 47.3 10.8 65 104-180 143-207 (333)
75 1b0a_A Protein (fold bifunctio 95.5 0.07 2.4E-06 47.7 9.5 159 16-220 54-231 (288)
76 2d0i_A Dehydrogenase; structur 95.3 0.1 3.5E-06 47.2 10.3 66 104-180 143-208 (333)
77 3l07_A Bifunctional protein fo 94.9 0.14 4.8E-06 45.6 9.8 160 15-220 54-233 (285)
78 3p2y_A Alanine dehydrogenase/p 94.8 0.078 2.7E-06 49.1 8.1 96 105-219 182-301 (381)
79 3p2o_A Bifunctional protein fo 94.7 0.17 5.7E-06 45.1 9.6 159 16-220 54-232 (285)
80 3ngx_A Bifunctional protein fo 94.6 0.096 3.3E-06 46.5 7.7 157 16-220 48-222 (276)
81 4dio_A NAD(P) transhydrogenase 94.5 0.057 2E-06 50.5 6.4 99 104-219 187-311 (405)
82 4a5o_A Bifunctional protein fo 94.5 0.19 6.5E-06 44.8 9.4 161 15-220 55-233 (286)
83 3ggo_A Prephenate dehydrogenas 94.4 0.15 5.2E-06 45.5 8.8 81 86-180 19-102 (314)
84 1edz_A 5,10-methylenetetrahydr 94.2 0.42 1.4E-05 43.2 11.3 188 15-234 56-286 (320)
85 3fr7_A Putative ketol-acid red 94.2 0.054 1.9E-06 52.0 5.5 71 105-180 51-129 (525)
86 4a26_A Putative C-1-tetrahydro 94.0 0.24 8.1E-06 44.5 9.1 161 15-220 57-239 (300)
87 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.17 5.8E-06 43.4 7.5 72 102-180 26-99 (223)
88 3fef_A Putative glucosidase LP 93.7 0.42 1.4E-05 45.2 10.7 69 106-180 4-83 (450)
89 2d5c_A AROE, shikimate 5-dehyd 93.7 0.88 3E-05 39.1 12.0 162 4-180 6-179 (263)
90 3ce6_A Adenosylhomocysteinase; 93.6 0.76 2.6E-05 43.9 12.4 67 104-180 271-337 (494)
91 3oj0_A Glutr, glutamyl-tRNA re 93.6 0.15 5.2E-06 39.6 6.4 67 107-180 21-88 (144)
92 1x13_A NAD(P) transhydrogenase 93.6 0.27 9.1E-06 45.6 9.0 97 105-220 170-292 (401)
93 4b4u_A Bifunctional protein fo 93.5 0.85 2.9E-05 40.9 11.7 160 16-221 74-252 (303)
94 2a9f_A Putative malic enzyme ( 93.3 0.088 3E-06 49.0 5.2 165 43-232 117-299 (398)
95 4dll_A 2-hydroxy-3-oxopropiona 93.1 0.35 1.2E-05 43.0 8.7 67 105-180 29-95 (320)
96 2hk9_A Shikimate dehydrogenase 92.9 1 3.5E-05 39.1 11.3 158 10-180 25-194 (275)
97 3auf_A Glycinamide ribonucleot 92.8 0.51 1.8E-05 40.5 9.1 98 108-226 23-140 (229)
98 2bw0_A 10-FTHFDH, 10-formyltet 92.7 0.51 1.8E-05 42.6 9.3 102 106-225 21-137 (329)
99 3aek_B Light-independent proto 92.7 0.48 1.7E-05 45.5 9.6 155 16-180 175-357 (525)
100 4e12_A Diketoreductase; oxidor 92.6 0.68 2.3E-05 40.3 9.8 67 108-180 5-93 (283)
101 1np3_A Ketol-acid reductoisome 92.6 0.17 6E-06 45.5 6.0 67 105-180 14-80 (338)
102 1fmt_A Methionyl-tRNA FMet for 92.6 0.55 1.9E-05 42.2 9.3 100 107-225 3-119 (314)
103 1l7d_A Nicotinamide nucleotide 92.5 1.8 6.1E-05 39.5 12.9 98 104-220 169-294 (384)
104 1c1d_A L-phenylalanine dehydro 92.5 2.6 8.9E-05 38.5 13.9 133 15-180 101-239 (355)
105 2ywr_A Phosphoribosylglycinami 92.3 0.73 2.5E-05 39.0 9.3 97 108-226 2-119 (216)
106 3av3_A Phosphoribosylglycinami 92.1 0.59 2E-05 39.5 8.5 96 108-225 4-120 (212)
107 2h78_A Hibadh, 3-hydroxyisobut 92.0 0.56 1.9E-05 40.9 8.5 64 108-180 4-67 (302)
108 2g5c_A Prephenate dehydrogenas 92.0 0.57 2E-05 40.3 8.5 66 108-180 2-70 (281)
109 2dpo_A L-gulonate 3-dehydrogen 92.0 0.85 2.9E-05 40.9 9.8 68 107-180 6-95 (319)
110 4ezb_A Uncharacterized conserv 91.8 1.1 3.9E-05 39.7 10.4 67 108-180 25-95 (317)
111 3d1l_A Putative NADP oxidoredu 91.4 0.77 2.6E-05 39.2 8.6 67 105-180 8-76 (266)
112 3qha_A Putative oxidoreductase 91.4 1.6 5.4E-05 38.1 10.8 64 107-180 15-78 (296)
113 3tqr_A Phosphoribosylglycinami 91.4 1.1 3.9E-05 38.0 9.4 99 107-225 5-121 (215)
114 3q0i_A Methionyl-tRNA formyltr 91.4 0.98 3.3E-05 40.6 9.5 101 106-225 6-123 (318)
115 3pid_A UDP-glucose 6-dehydroge 91.1 0.82 2.8E-05 42.9 9.0 80 94-180 22-117 (432)
116 3obb_A Probable 3-hydroxyisobu 91.0 0.85 2.9E-05 40.4 8.6 64 108-180 4-67 (300)
117 1jkx_A GART;, phosphoribosylgl 90.9 1.5 5.3E-05 36.9 9.8 98 108-226 1-118 (212)
118 2q5c_A NTRC family transcripti 90.9 0.9 3.1E-05 37.8 8.2 135 4-156 8-142 (196)
119 3l6d_A Putative oxidoreductase 90.8 0.45 1.5E-05 42.0 6.6 67 105-180 7-73 (306)
120 3pef_A 6-phosphogluconate dehy 90.7 0.31 1.1E-05 42.4 5.4 64 108-180 2-65 (287)
121 4h7p_A Malate dehydrogenase; s 90.6 1 3.5E-05 41.0 8.9 117 103-222 20-153 (345)
122 3qsg_A NAD-binding phosphogluc 90.5 0.43 1.5E-05 42.3 6.2 67 107-180 24-91 (312)
123 1oju_A MDH, malate dehydrogena 90.5 0.75 2.6E-05 40.8 7.8 71 108-180 1-77 (294)
124 3gvi_A Malate dehydrogenase; N 90.0 0.76 2.6E-05 41.4 7.5 76 103-180 3-83 (324)
125 2vhw_A Alanine dehydrogenase; 89.9 1.2 4.1E-05 40.6 8.9 99 104-220 165-268 (377)
126 3tri_A Pyrroline-5-carboxylate 89.8 0.93 3.2E-05 39.5 7.7 65 107-180 3-71 (280)
127 3g0o_A 3-hydroxyisobutyrate de 89.8 1.2 4.1E-05 39.0 8.5 66 107-180 7-72 (303)
128 4e21_A 6-phosphogluconate dehy 89.6 1.5 5.1E-05 39.9 9.2 67 105-180 20-89 (358)
129 3jyo_A Quinate/shikimate dehyd 89.6 9.5 0.00032 33.3 14.2 168 10-180 17-202 (283)
130 3doj_A AT3G25530, dehydrogenas 89.5 0.61 2.1E-05 41.1 6.4 67 105-180 19-85 (310)
131 3tqq_A Methionyl-tRNA formyltr 89.4 2 6.8E-05 38.5 9.7 100 107-225 2-118 (314)
132 3p9x_A Phosphoribosylglycinami 89.4 3.4 0.00012 34.9 10.7 38 172-226 81-120 (211)
133 1i36_A Conserved hypothetical 89.4 0.95 3.2E-05 38.5 7.3 64 108-180 1-64 (264)
134 2i6t_A Ubiquitin-conjugating e 89.3 1.7 5.9E-05 38.5 9.2 70 107-180 14-85 (303)
135 2pju_A Propionate catabolism o 89.3 1.9 6.6E-05 36.8 9.1 137 5-163 17-160 (225)
136 2f1k_A Prephenate dehydrogenas 89.2 1.5 5E-05 37.6 8.5 65 108-180 1-65 (279)
137 3dtt_A NADP oxidoreductase; st 89.1 0.48 1.6E-05 40.4 5.1 70 102-180 14-98 (245)
138 3dcm_X AdoMet, uncharacterized 89.0 2.6 8.9E-05 35.2 9.5 99 119-223 30-164 (192)
139 2xdq_B Light-independent proto 88.9 0.62 2.1E-05 44.4 6.3 76 103-180 299-380 (511)
140 1pzg_A LDH, lactate dehydrogen 88.9 1.2 4E-05 40.0 7.9 73 107-180 9-86 (331)
141 2i99_A MU-crystallin homolog; 88.9 1.4 4.8E-05 39.0 8.3 73 101-180 129-204 (312)
142 1mio_A Nitrogenase molybdenum 88.8 2 6.9E-05 41.3 9.9 34 104-138 332-365 (533)
143 3rfo_A Methionyl-tRNA formyltr 88.8 2 7E-05 38.5 9.3 99 108-225 5-120 (317)
144 1vpd_A Tartronate semialdehyde 88.8 1.1 3.7E-05 38.8 7.4 64 108-180 6-69 (299)
145 4gbj_A 6-phosphogluconate dehy 88.7 0.43 1.5E-05 42.2 4.7 64 108-180 6-69 (297)
146 3gg2_A Sugar dehydrogenase, UD 88.4 1.4 4.9E-05 41.3 8.4 67 108-180 3-86 (450)
147 3cky_A 2-hydroxymethyl glutara 88.4 1.1 3.7E-05 38.8 7.1 65 107-180 4-68 (301)
148 2eez_A Alanine dehydrogenase; 88.3 1.9 6.4E-05 39.1 8.9 98 104-219 163-265 (369)
149 3pqe_A L-LDH, L-lactate dehydr 88.3 0.65 2.2E-05 41.9 5.7 74 106-180 4-81 (326)
150 1leh_A Leucine dehydrogenase; 88.3 1.6 5.5E-05 39.9 8.4 69 102-180 166-238 (364)
151 1qgu_B Protein (nitrogenase mo 88.2 4.3 0.00015 38.8 11.7 164 15-181 235-443 (519)
152 3pdu_A 3-hydroxyisobutyrate de 88.1 0.4 1.4E-05 41.6 4.1 64 108-180 2-65 (287)
153 3vtf_A UDP-glucose 6-dehydroge 88.1 0.49 1.7E-05 44.6 5.0 76 99-182 325-411 (444)
154 3vku_A L-LDH, L-lactate dehydr 88.1 0.69 2.4E-05 41.7 5.8 70 105-180 7-84 (326)
155 1zej_A HBD-9, 3-hydroxyacyl-CO 88.1 1.1 3.7E-05 39.8 6.9 67 106-180 11-81 (293)
156 1y6j_A L-lactate dehydrogenase 88.0 1.7 5.7E-05 38.8 8.2 72 107-180 7-82 (318)
157 3gt0_A Pyrroline-5-carboxylate 87.9 0.71 2.4E-05 39.2 5.5 64 108-180 3-71 (247)
158 1gpj_A Glutamyl-tRNA reductase 87.9 0.83 2.8E-05 42.1 6.3 74 101-180 161-235 (404)
159 3da8_A Probable 5'-phosphoribo 87.8 1.7 5.9E-05 36.8 7.8 96 107-225 12-127 (215)
160 1mv8_A GMD, GDP-mannose 6-dehy 87.8 1.9 6.5E-05 39.9 8.8 67 108-180 1-84 (436)
161 1pjq_A CYSG, siroheme synthase 87.7 2.2 7.6E-05 40.0 9.2 72 104-180 9-80 (457)
162 3b1f_A Putative prephenate deh 87.7 1.2 4E-05 38.5 6.8 67 107-180 6-74 (290)
163 3u7q_B Nitrogenase molybdenum- 87.7 5.6 0.00019 38.1 12.2 163 16-181 240-447 (523)
164 3k96_A Glycerol-3-phosphate de 87.7 2.3 7.8E-05 38.5 9.0 68 107-180 29-107 (356)
165 2ahr_A Putative pyrroline carb 87.7 1.1 3.6E-05 38.1 6.4 64 108-180 4-68 (259)
166 2gf2_A Hibadh, 3-hydroxyisobut 87.6 0.79 2.7E-05 39.6 5.7 64 108-180 1-64 (296)
167 1obb_A Maltase, alpha-glucosid 87.4 4.1 0.00014 38.7 10.8 69 107-180 3-85 (480)
168 2bln_A Protein YFBG; transfera 86.9 1.4 4.8E-05 39.2 7.0 99 108-225 1-113 (305)
169 1meo_A Phosophoribosylglycinam 86.9 4.7 0.00016 33.8 10.0 37 172-225 79-117 (209)
170 3u95_A Glycoside hydrolase, fa 86.7 5.3 0.00018 37.8 11.2 68 108-180 1-84 (477)
171 3p7m_A Malate dehydrogenase; p 86.5 3 0.0001 37.3 9.0 73 106-180 4-81 (321)
172 2vns_A Metalloreductase steap3 86.4 0.97 3.3E-05 37.7 5.4 64 107-180 28-91 (215)
173 1f0y_A HCDH, L-3-hydroxyacyl-C 86.1 1.6 5.4E-05 38.1 6.8 67 108-180 16-108 (302)
174 4ds3_A Phosphoribosylglycinami 86.0 3.8 0.00013 34.5 8.9 37 172-225 86-124 (209)
175 3fi9_A Malate dehydrogenase; s 86.0 1 3.5E-05 40.9 5.6 71 105-180 6-84 (343)
176 2zqz_A L-LDH, L-lactate dehydr 86.0 0.95 3.2E-05 40.7 5.4 69 106-180 8-84 (326)
177 1mio_B Nitrogenase molybdenum 85.8 4.7 0.00016 37.7 10.3 163 15-180 186-393 (458)
178 3tl2_A Malate dehydrogenase; c 85.7 2.9 0.0001 37.3 8.5 73 106-180 7-86 (315)
179 1ez4_A Lactate dehydrogenase; 85.6 0.83 2.8E-05 40.9 4.8 67 107-180 5-80 (318)
180 2uyy_A N-PAC protein; long-cha 85.5 1 3.6E-05 39.4 5.4 64 108-180 31-94 (316)
181 1evy_A Glycerol-3-phosphate de 85.0 3.6 0.00012 36.7 8.8 66 109-180 17-93 (366)
182 3d0o_A L-LDH 1, L-lactate dehy 84.9 1.7 5.9E-05 38.6 6.6 74 106-180 5-82 (317)
183 3vtf_A UDP-glucose 6-dehydroge 84.6 3 0.0001 39.2 8.3 70 107-179 21-104 (444)
184 3nv9_A Malic enzyme; rossmann 84.6 9.3 0.00032 36.2 11.6 177 27-231 134-336 (487)
185 2ewd_A Lactate dehydrogenase,; 84.6 2.4 8.4E-05 37.4 7.4 72 107-180 4-80 (317)
186 2y0c_A BCEC, UDP-glucose dehyd 84.6 3.1 0.0001 39.3 8.4 68 107-180 8-92 (478)
187 4a7p_A UDP-glucose dehydrogena 84.3 4.6 0.00016 37.9 9.4 70 107-179 8-91 (446)
188 3hhp_A Malate dehydrogenase; M 84.2 4.2 0.00014 36.3 8.8 70 108-180 1-77 (312)
189 3hdj_A Probable ornithine cycl 84.2 4.1 0.00014 36.2 8.7 111 101-235 115-229 (313)
190 2hjr_A Malate dehydrogenase; m 83.7 2.9 9.9E-05 37.4 7.5 73 106-180 13-90 (328)
191 2egg_A AROE, shikimate 5-dehyd 83.4 4 0.00014 35.9 8.2 161 10-180 36-212 (297)
192 3tnl_A Shikimate dehydrogenase 83.2 2.9 9.9E-05 37.4 7.3 166 10-180 50-234 (315)
193 1txg_A Glycerol-3-phosphate de 83.0 4.2 0.00014 35.5 8.2 69 108-180 1-79 (335)
194 1x0v_A GPD-C, GPDH-C, glycerol 83.0 3.3 0.00011 36.7 7.6 73 107-180 8-98 (354)
195 1dlj_A UDP-glucose dehydrogena 82.5 4.7 0.00016 36.9 8.6 66 108-180 1-81 (402)
196 3ktd_A Prephenate dehydrogenas 82.4 1.5 5E-05 39.7 5.1 64 108-180 9-76 (341)
197 1u8x_X Maltose-6'-phosphate gl 82.3 8.7 0.0003 36.3 10.6 69 107-180 28-110 (472)
198 3kcq_A Phosphoribosylglycinami 82.3 5.8 0.0002 33.5 8.5 98 108-225 9-120 (215)
199 1b8p_A Protein (malate dehydro 82.3 1.7 5.9E-05 38.8 5.4 74 107-180 5-91 (329)
200 3nep_X Malate dehydrogenase; h 81.9 2.3 7.9E-05 38.0 6.1 71 108-180 1-77 (314)
201 1yqg_A Pyrroline-5-carboxylate 81.7 2.5 8.7E-05 35.6 6.1 63 108-180 1-65 (263)
202 2d4a_B Malate dehydrogenase; a 81.4 3.8 0.00013 36.3 7.3 70 109-180 1-75 (308)
203 1pjc_A Protein (L-alanine dehy 81.3 6.7 0.00023 35.3 9.1 97 105-218 165-265 (361)
204 3ic5_A Putative saccharopine d 81.3 5 0.00017 28.8 6.9 68 106-180 4-77 (118)
205 3ado_A Lambda-crystallin; L-gu 81.3 5.1 0.00017 35.9 8.1 67 108-180 7-95 (319)
206 1yb4_A Tartronic semialdehyde 81.3 2.4 8.1E-05 36.4 5.8 63 108-180 4-66 (295)
207 1s6y_A 6-phospho-beta-glucosid 81.3 11 0.00038 35.2 10.8 73 107-180 7-91 (450)
208 2izz_A Pyrroline-5-carboxylate 81.2 2.5 8.7E-05 37.3 6.1 69 105-180 20-92 (322)
209 1ur5_A Malate dehydrogenase; o 80.9 4.3 0.00015 35.8 7.5 71 108-180 3-78 (309)
210 1mld_A Malate dehydrogenase; o 80.7 2.7 9.2E-05 37.3 6.1 70 108-180 1-76 (314)
211 3pdi_A Nitrogenase MOFE cofact 80.4 5 0.00017 37.9 8.1 152 20-180 225-409 (483)
212 3mog_A Probable 3-hydroxybutyr 80.3 7.2 0.00025 36.8 9.2 67 107-180 5-92 (483)
213 1t2d_A LDH-P, L-lactate dehydr 80.2 5.1 0.00017 35.7 7.8 72 107-180 4-80 (322)
214 3k6j_A Protein F01G10.3, confi 80.1 12 0.00039 35.3 10.5 71 108-180 55-138 (460)
215 3ulk_A Ketol-acid reductoisome 79.8 3.1 0.0001 39.5 6.3 71 105-180 35-106 (491)
216 1x7d_A Ornithine cyclodeaminas 79.7 3.4 0.00011 37.4 6.5 73 101-180 123-202 (350)
217 1smk_A Malate dehydrogenase, g 79.6 2.6 8.8E-05 37.6 5.6 72 106-180 7-84 (326)
218 2pv7_A T-protein [includes: ch 79.4 3.2 0.00011 36.2 6.1 52 108-180 22-73 (298)
219 4huj_A Uncharacterized protein 79.4 2.3 8E-05 35.3 5.0 65 107-180 23-89 (220)
220 3c24_A Putative oxidoreductase 79.3 6.1 0.00021 33.9 7.8 64 108-180 12-75 (286)
221 1bg6_A N-(1-D-carboxylethyl)-L 79.1 11 0.00036 33.1 9.5 67 108-180 5-83 (359)
222 3c85_A Putative glutathione-re 78.7 5.2 0.00018 31.8 6.7 69 105-180 37-113 (183)
223 1jay_A Coenzyme F420H2:NADP+ o 78.3 4.2 0.00014 33.0 6.1 67 108-180 1-72 (212)
224 1omo_A Alanine dehydrogenase; 78.3 5.4 0.00018 35.5 7.3 108 101-234 119-232 (322)
225 2y0c_A BCEC, UDP-glucose dehyd 77.4 4.3 0.00015 38.2 6.7 74 104-183 325-417 (478)
226 1ldn_A L-lactate dehydrogenase 76.9 2.7 9.4E-05 37.2 4.9 73 107-180 6-82 (316)
227 3l4e_A Uncharacterized peptida 76.7 3.3 0.00011 34.6 5.1 59 103-180 23-87 (206)
228 1z7e_A Protein aRNA; rossmann 76.1 6.4 0.00022 38.2 7.7 99 108-225 1-113 (660)
229 3lou_A Formyltetrahydrofolate 75.5 28 0.00096 30.6 11.1 37 172-225 171-209 (292)
230 1yj8_A Glycerol-3-phosphate de 75.4 3.9 0.00013 36.7 5.6 72 108-180 22-111 (375)
231 1up7_A 6-phospho-beta-glucosid 74.9 10 0.00035 35.1 8.4 69 107-180 2-81 (417)
232 2o3j_A UDP-glucose 6-dehydroge 74.3 19 0.00066 33.7 10.3 78 104-183 332-424 (481)
233 2x0j_A Malate dehydrogenase; o 74.2 9.6 0.00033 33.6 7.7 71 108-180 1-77 (294)
234 3n0v_A Formyltetrahydrofolate 74.1 26 0.0009 30.7 10.5 26 201-226 178-205 (286)
235 2raf_A Putative dinucleotide-b 73.9 6.1 0.00021 32.5 6.1 35 104-139 16-50 (209)
236 2q3e_A UDP-glucose 6-dehydroge 73.9 6.4 0.00022 36.7 6.8 67 108-180 6-90 (467)
237 1z82_A Glycerol-3-phosphate de 73.6 9.7 0.00033 33.5 7.7 67 107-180 14-88 (335)
238 3o1l_A Formyltetrahydrofolate 73.4 35 0.0012 30.2 11.2 37 172-225 181-219 (302)
239 4gwg_A 6-phosphogluconate dehy 73.1 15 0.00052 34.7 9.3 68 107-180 4-76 (484)
240 1guz_A Malate dehydrogenase; o 73.1 8.9 0.0003 33.7 7.2 71 108-180 1-77 (310)
241 2zyd_A 6-phosphogluconate dehy 73.1 8.9 0.00031 36.1 7.7 71 104-180 12-86 (480)
242 3tqh_A Quinone oxidoreductase; 73.0 20 0.00067 31.1 9.5 75 100-180 146-223 (321)
243 3u7q_A Nitrogenase molybdenum- 72.9 6 0.0002 37.5 6.4 155 17-180 239-425 (492)
244 3jy6_A Transcriptional regulat 72.8 36 0.0012 28.1 10.8 102 11-116 24-132 (276)
245 3ilk_A Uncharacterized tRNA/RR 72.7 5.1 0.00017 34.5 5.4 72 104-180 4-82 (244)
246 1y81_A Conserved hypothetical 72.7 7.7 0.00026 30.1 6.0 63 105-180 12-77 (138)
247 2ixa_A Alpha-N-acetylgalactosa 72.7 8.2 0.00028 35.6 7.2 71 105-180 18-99 (444)
248 2xxj_A L-LDH, L-lactate dehydr 72.5 4.5 0.00015 35.8 5.2 67 108-180 1-75 (310)
249 2yjz_A Metalloreductase steap4 74.9 0.75 2.6E-05 38.2 0.0 67 103-180 15-81 (201)
250 3lk7_A UDP-N-acetylmuramoylala 72.3 7.2 0.00025 36.1 6.7 74 104-180 6-80 (451)
251 3onp_A TRNA/RRNA methyltransfe 72.1 6 0.00021 34.1 5.7 71 107-180 4-81 (249)
252 3g79_A NDP-N-acetyl-D-galactos 72.0 5.9 0.0002 37.5 6.1 70 107-180 18-109 (478)
253 3e18_A Oxidoreductase; dehydro 71.7 7.7 0.00026 34.6 6.6 67 106-180 4-73 (359)
254 3e61_A Putative transcriptiona 71.0 16 0.00056 30.2 8.2 121 11-135 25-156 (277)
255 2p4q_A 6-phosphogluconate dehy 70.9 22 0.00074 33.6 9.8 68 107-180 10-82 (497)
256 2cvz_A Dehydrogenase, 3-hydrox 70.6 6 0.00021 33.6 5.4 62 108-180 2-63 (289)
257 3o74_A Fructose transport syst 70.5 42 0.0014 27.3 11.3 124 11-138 19-157 (272)
258 3gg2_A Sugar dehydrogenase, UD 69.9 14 0.00049 34.3 8.2 74 103-183 314-397 (450)
259 3eag_A UDP-N-acetylmuramate:L- 69.6 17 0.00059 32.0 8.3 70 106-180 3-74 (326)
260 3ldh_A Lactate dehydrogenase; 69.5 5.3 0.00018 36.0 4.9 72 106-179 20-96 (330)
261 1o6z_A MDH, malate dehydrogena 69.4 12 0.0004 32.9 7.1 72 108-180 1-78 (303)
262 3don_A Shikimate dehydrogenase 69.3 3.3 0.00011 36.3 3.4 156 11-180 14-183 (277)
263 3g79_A NDP-N-acetyl-D-galactos 69.0 17 0.0006 34.2 8.7 66 104-182 350-425 (478)
264 3uuw_A Putative oxidoreductase 69.0 17 0.00059 31.3 8.2 67 106-180 5-74 (308)
265 4a7p_A UDP-glucose dehydrogena 68.6 15 0.00053 34.2 8.1 72 104-183 319-400 (446)
266 1dlj_A UDP-glucose dehydrogena 68.0 10 0.00035 34.6 6.7 70 104-183 306-384 (402)
267 1zcj_A Peroxisomal bifunctiona 67.9 42 0.0014 31.1 11.1 66 108-180 38-122 (463)
268 2o3j_A UDP-glucose 6-dehydroge 67.7 10 0.00036 35.5 6.8 67 108-180 10-94 (481)
269 3e9m_A Oxidoreductase, GFO/IDH 67.6 16 0.00053 32.1 7.6 69 106-180 4-75 (330)
270 3db2_A Putative NADPH-dependen 67.3 21 0.0007 31.5 8.4 67 106-180 4-74 (354)
271 3euw_A MYO-inositol dehydrogen 67.3 24 0.00084 30.8 8.9 66 107-180 4-73 (344)
272 3q2i_A Dehydrogenase; rossmann 67.0 15 0.00052 32.4 7.5 67 106-180 12-83 (354)
273 3sg0_A Extracellular ligand-bi 66.8 27 0.00092 30.1 9.0 118 11-135 46-191 (386)
274 2nvw_A Galactose/lactose metab 66.5 14 0.00049 34.5 7.5 70 107-180 39-116 (479)
275 7mdh_A Protein (malate dehydro 65.9 36 0.0012 31.1 9.9 74 106-180 31-116 (375)
276 3gyb_A Transcriptional regulat 65.8 51 0.0018 27.0 10.3 115 11-135 22-150 (280)
277 3e8x_A Putative NAD-dependent 65.8 15 0.00052 30.0 6.8 75 102-181 16-93 (236)
278 2hmt_A YUAA protein; RCK, KTN, 65.6 4.9 0.00017 29.9 3.4 69 105-180 4-78 (144)
279 3btv_A Galactose/lactose metab 65.2 11 0.00037 34.7 6.3 71 106-180 19-97 (438)
280 3pdi_B Nitrogenase MOFE cofact 65.1 33 0.0011 32.0 9.7 121 16-138 188-343 (458)
281 3q2o_A Phosphoribosylaminoimid 65.1 16 0.00055 32.7 7.3 64 105-178 12-81 (389)
282 2iz1_A 6-phosphogluconate dehy 64.9 14 0.00046 34.6 7.0 67 108-180 6-76 (474)
283 1kyq_A Met8P, siroheme biosynt 64.7 4.7 0.00016 35.3 3.5 37 104-141 10-46 (274)
284 2ho3_A Oxidoreductase, GFO/IDH 64.6 23 0.0008 30.7 8.1 66 108-180 2-70 (325)
285 3dwg_A Cysteine synthase B; su 64.4 21 0.00073 31.4 7.9 61 100-164 65-126 (325)
286 2rcy_A Pyrroline carboxylate r 64.1 6.2 0.00021 33.1 4.1 59 107-180 4-66 (262)
287 2d59_A Hypothetical protein PH 63.4 15 0.00051 28.5 5.9 61 107-180 22-85 (144)
288 1hyh_A L-hicdh, L-2-hydroxyiso 63.3 9.6 0.00033 33.3 5.3 66 108-180 2-77 (309)
289 1fy2_A Aspartyl dipeptidase; s 63.2 39 0.0013 28.2 9.0 67 83-180 15-87 (229)
290 4hkt_A Inositol 2-dehydrogenas 63.1 25 0.00087 30.5 8.1 64 108-180 4-71 (331)
291 3two_A Mannitol dehydrogenase; 62.9 34 0.0012 29.9 9.0 72 101-180 171-242 (348)
292 3ezy_A Dehydrogenase; structur 62.7 26 0.00087 30.8 8.1 66 108-180 3-72 (344)
293 3ic6_A Putative methylase fami 62.6 6.8 0.00023 33.4 4.0 73 105-180 15-113 (223)
294 3hbm_A UDP-sugar hydrolase; PS 62.4 25 0.00085 30.6 7.8 136 41-179 56-232 (282)
295 3u3x_A Oxidoreductase; structu 62.3 21 0.00072 31.8 7.5 69 106-180 25-96 (361)
296 1lss_A TRK system potassium up 62.3 42 0.0014 24.4 8.3 66 107-180 4-77 (140)
297 3nrc_A Enoyl-[acyl-carrier-pro 61.6 26 0.00088 29.7 7.7 62 90-154 9-72 (280)
298 2v6b_A L-LDH, L-lactate dehydr 61.3 5.7 0.00019 34.9 3.4 65 108-180 1-75 (304)
299 3td9_A Branched chain amino ac 61.2 78 0.0027 27.1 13.5 118 11-135 35-182 (366)
300 2gn4_A FLAA1 protein, UDP-GLCN 61.2 22 0.00077 31.1 7.4 88 84-181 3-100 (344)
301 1pgj_A 6PGDH, 6-PGDH, 6-phosph 61.1 15 0.0005 34.5 6.5 67 108-180 2-76 (478)
302 3ip3_A Oxidoreductase, putativ 61.1 13 0.00044 32.7 5.8 70 108-180 3-75 (337)
303 3o8q_A Shikimate 5-dehydrogena 61.0 64 0.0022 27.9 10.2 160 11-180 22-195 (281)
304 3aek_A Light-independent proto 61.0 11 0.00038 34.9 5.6 35 104-139 304-339 (437)
305 2dvm_A Malic enzyme, 439AA lon 60.8 4.3 0.00015 38.1 2.7 157 14-180 89-271 (439)
306 1zh8_A Oxidoreductase; TM0312, 60.7 18 0.00063 31.8 6.8 72 103-180 14-90 (340)
307 3c7a_A Octopine dehydrogenase; 60.5 39 0.0013 30.3 9.1 70 108-180 3-90 (404)
308 4fb5_A Probable oxidoreductase 60.5 23 0.0008 31.1 7.5 72 103-180 21-102 (393)
309 3llv_A Exopolyphosphatase-rela 60.4 20 0.00067 26.8 6.1 68 106-180 5-78 (141)
310 3nrb_A Formyltetrahydrofolate 60.2 14 0.00049 32.4 5.8 26 200-225 176-203 (287)
311 1iuk_A Hypothetical protein TT 60.0 14 0.00049 28.5 5.2 61 107-180 13-78 (140)
312 2q3e_A UDP-glucose 6-dehydroge 59.8 40 0.0014 31.2 9.2 77 103-182 325-419 (467)
313 3u62_A Shikimate dehydrogenase 59.8 18 0.00061 31.0 6.3 150 10-180 13-174 (253)
314 4aj2_A L-lactate dehydrogenase 59.7 12 0.00041 33.6 5.3 73 105-179 17-94 (331)
315 3ohs_X Trans-1,2-dihydrobenzen 59.5 30 0.001 30.2 7.9 66 108-180 3-74 (334)
316 3cea_A MYO-inositol 2-dehydrog 59.4 41 0.0014 29.2 8.8 68 106-180 7-79 (346)
317 3o21_A Glutamate receptor 3; p 59.1 94 0.0032 27.3 15.3 130 1-137 8-163 (389)
318 4fcc_A Glutamate dehydrogenase 58.8 47 0.0016 31.2 9.4 69 75-144 199-279 (450)
319 2wtb_A MFP2, fatty acid multif 58.7 32 0.0011 34.0 8.7 66 108-180 313-399 (725)
320 3snr_A Extracellular ligand-bi 58.6 53 0.0018 27.9 9.3 121 12-135 27-167 (362)
321 2p2s_A Putative oxidoreductase 58.5 27 0.00093 30.4 7.5 69 107-180 4-74 (336)
322 2hq1_A Glucose/ribitol dehydro 58.3 24 0.00082 28.8 6.7 33 105-137 3-35 (247)
323 3lop_A Substrate binding perip 58.3 68 0.0023 27.5 10.0 79 53-134 73-172 (364)
324 3obi_A Formyltetrahydrofolate 58.1 20 0.00068 31.5 6.4 25 201-225 178-204 (288)
325 2pgd_A 6-phosphogluconate dehy 58.0 19 0.00063 33.7 6.6 66 108-180 3-74 (482)
326 3orq_A N5-carboxyaminoimidazol 57.9 25 0.00086 31.4 7.2 39 105-144 10-48 (377)
327 1y7l_A O-acetylserine sulfhydr 57.8 28 0.00095 30.3 7.4 76 86-165 35-116 (316)
328 3oa2_A WBPB; oxidoreductase, s 57.8 8.5 0.00029 33.9 4.0 68 107-180 3-81 (318)
329 3t4e_A Quinate/shikimate dehyd 57.6 19 0.00067 31.9 6.3 165 11-180 45-228 (312)
330 2q2v_A Beta-D-hydroxybutyrate 57.6 36 0.0012 28.1 7.8 72 105-180 2-87 (255)
331 2ew2_A 2-dehydropantoate 2-red 57.5 43 0.0015 28.3 8.5 65 108-180 4-82 (316)
332 1lu9_A Methylene tetrahydromet 57.3 39 0.0013 28.8 8.2 78 103-181 115-197 (287)
333 3afn_B Carbonyl reductase; alp 57.0 29 0.00099 28.4 7.1 77 104-181 4-94 (258)
334 1lld_A L-lactate dehydrogenase 56.9 22 0.00076 30.7 6.5 67 107-180 7-83 (319)
335 2v03_A Cysteine synthase B; py 55.9 31 0.001 29.9 7.3 60 101-164 54-114 (303)
336 1nvt_A Shikimate 5'-dehydrogen 55.9 95 0.0033 26.4 10.6 169 4-180 16-201 (287)
337 3evn_A Oxidoreductase, GFO/IDH 55.6 19 0.00065 31.4 5.9 68 106-180 4-75 (329)
338 3saj_A Glutamate receptor 1; r 55.4 52 0.0018 28.8 8.9 127 1-137 13-161 (384)
339 2q3b_A Cysteine synthase A; py 55.3 36 0.0012 29.5 7.7 60 101-164 60-120 (313)
340 3ec7_A Putative dehydrogenase; 55.1 44 0.0015 29.5 8.3 71 105-180 21-95 (357)
341 2duw_A Putative COA-binding pr 55.0 8.4 0.00029 30.0 3.1 63 107-180 13-78 (145)
342 3h9u_A Adenosylhomocysteinase; 54.8 56 0.0019 30.5 9.2 66 92-157 25-93 (436)
343 1ve1_A O-acetylserine sulfhydr 54.5 45 0.0015 28.8 8.1 49 114-165 68-116 (304)
344 3o9z_A Lipopolysaccaride biosy 54.3 25 0.00085 30.7 6.4 68 107-180 3-80 (312)
345 1iz0_A Quinone oxidoreductase; 54.1 40 0.0014 28.7 7.7 69 106-180 125-196 (302)
346 3n58_A Adenosylhomocysteinase; 54.0 59 0.002 30.6 9.2 64 94-157 29-95 (464)
347 3hwr_A 2-dehydropantoate 2-red 54.0 42 0.0014 29.2 7.9 68 105-180 17-94 (318)
348 4gmf_A Yersiniabactin biosynth 54.0 22 0.00076 32.2 6.2 67 106-180 6-74 (372)
349 3tum_A Shikimate dehydrogenase 53.8 44 0.0015 28.9 7.8 184 14-215 23-220 (269)
350 3uog_A Alcohol dehydrogenase; 53.8 56 0.0019 28.8 8.8 70 105-180 188-265 (363)
351 3pwz_A Shikimate dehydrogenase 53.7 1.1E+02 0.0036 26.3 11.9 160 11-180 16-189 (272)
352 3i83_A 2-dehydropantoate 2-red 53.6 42 0.0014 29.1 7.8 65 108-180 3-79 (320)
353 2zsk_A PH1733, 226AA long hypo 53.5 68 0.0023 26.4 8.8 82 43-137 62-146 (226)
354 3rc1_A Sugar 3-ketoreductase; 53.3 28 0.00096 30.8 6.7 68 105-180 25-97 (350)
355 1jl3_A Arsenate reductase; alp 53.2 32 0.0011 26.3 6.3 71 108-180 4-82 (139)
356 4iin_A 3-ketoacyl-acyl carrier 53.1 14 0.00049 31.1 4.6 76 104-180 26-115 (271)
357 3mz0_A Inositol 2-dehydrogenas 52.9 50 0.0017 28.8 8.3 67 108-180 3-74 (344)
358 1gtm_A Glutamate dehydrogenase 52.2 29 0.001 32.1 6.8 63 75-138 175-243 (419)
359 1wdk_A Fatty oxidation complex 52.0 15 0.00052 36.3 5.1 66 108-180 315-401 (715)
360 3kg2_A Glutamate receptor 2; I 52.0 1.7E+02 0.0059 28.3 14.0 127 1-137 5-154 (823)
361 1ydw_A AX110P-like protein; st 52.0 41 0.0014 29.6 7.6 69 107-180 6-79 (362)
362 2l17_A Synarsc, arsenate reduc 51.9 37 0.0013 25.9 6.4 70 108-179 5-82 (134)
363 3ghy_A Ketopantoate reductase 51.6 59 0.002 28.4 8.5 66 107-180 3-78 (335)
364 3ojo_A CAP5O; rossmann fold, c 51.6 25 0.00087 32.6 6.3 66 101-182 309-385 (431)
365 3i23_A Oxidoreductase, GFO/IDH 51.0 21 0.00072 31.5 5.5 67 108-180 3-73 (349)
366 3aog_A Glutamate dehydrogenase 50.9 77 0.0026 29.6 9.4 104 74-180 198-318 (440)
367 4e4t_A Phosphoribosylaminoimid 50.8 31 0.0011 31.5 6.7 55 86-141 13-68 (419)
368 3miz_A Putative transcriptiona 50.4 7.1 0.00024 33.1 2.1 102 11-116 31-140 (301)
369 3v5n_A Oxidoreductase; structu 50.2 18 0.00061 33.0 5.0 72 105-180 35-118 (417)
370 2dc1_A L-aspartate dehydrogena 50.2 50 0.0017 27.2 7.5 56 108-180 1-58 (236)
371 1id1_A Putative potassium chan 50.1 41 0.0014 25.5 6.5 68 107-180 3-79 (153)
372 3moi_A Probable dehydrogenase; 49.9 19 0.00065 32.3 5.1 67 107-180 2-72 (387)
373 2egu_A Cysteine synthase; O-ac 49.8 55 0.0019 28.3 7.9 61 101-164 58-118 (308)
374 1a5z_A L-lactate dehydrogenase 49.6 23 0.0008 31.1 5.5 65 108-180 1-75 (319)
375 1hye_A L-lactate/malate dehydr 49.3 28 0.00095 30.5 5.9 73 108-180 1-82 (313)
376 3qlj_A Short chain dehydrogena 49.1 30 0.001 30.0 6.1 37 102-138 22-58 (322)
377 3fbg_A Putative arginate lyase 49.1 1E+02 0.0034 26.8 9.6 70 106-180 150-225 (346)
378 4gpa_A Glutamate receptor 4; P 49.1 1.3E+02 0.0043 25.8 15.3 129 1-138 8-164 (389)
379 4fe7_A Xylose operon regulator 49.0 60 0.002 28.9 8.3 111 12-134 42-174 (412)
380 3gms_A Putative NADPH:quinone 48.8 31 0.001 30.1 6.1 71 105-180 143-221 (340)
381 1qyc_A Phenylcoumaran benzylic 48.7 38 0.0013 28.5 6.6 74 107-181 4-86 (308)
382 3hsy_A Glutamate receptor 2; l 48.7 1.3E+02 0.0046 26.0 13.4 127 1-137 5-154 (376)
383 3hcw_A Maltose operon transcri 48.7 1.2E+02 0.0039 25.2 12.4 118 11-135 29-165 (295)
384 3fwz_A Inner membrane protein 48.6 36 0.0012 25.5 5.8 65 108-180 8-79 (140)
385 1nyt_A Shikimate 5-dehydrogena 48.5 1.2E+02 0.0042 25.5 14.4 167 4-180 6-188 (271)
386 4had_A Probable oxidoreductase 48.5 49 0.0017 28.8 7.4 67 108-181 24-95 (350)
387 3gvp_A Adenosylhomocysteinase 48.5 65 0.0022 30.0 8.5 64 94-157 38-104 (435)
388 3mw9_A GDH 1, glutamate dehydr 48.2 42 0.0014 32.0 7.2 64 74-138 199-274 (501)
389 1qyd_A Pinoresinol-lariciresin 48.2 46 0.0016 28.0 7.1 74 107-181 4-85 (313)
390 2b0j_A 5,10-methenyltetrahydro 48.1 18 0.00063 32.4 4.4 26 159-186 128-153 (358)
391 2cdc_A Glucose dehydrogenase g 48.1 31 0.0011 30.5 6.1 70 107-180 181-254 (366)
392 3dty_A Oxidoreductase, GFO/IDH 48.1 17 0.00058 32.8 4.4 72 105-180 10-93 (398)
393 1j0a_A 1-aminocyclopropane-1-c 48.1 89 0.003 27.1 9.1 55 108-164 71-126 (325)
394 5mdh_A Malate dehydrogenase; o 48.1 16 0.00055 32.6 4.2 72 108-180 4-87 (333)
395 4gqa_A NAD binding oxidoreduct 47.9 31 0.0011 31.0 6.2 68 106-180 25-104 (412)
396 4evq_A Putative ABC transporte 47.7 1.3E+02 0.0045 25.6 10.1 118 11-135 35-183 (375)
397 1ja9_A 4HNR, 1,3,6,8-tetrahydr 47.6 19 0.00064 29.9 4.4 35 104-138 18-52 (274)
398 3hn7_A UDP-N-acetylmuramate-L- 47.6 71 0.0024 30.1 8.8 71 105-180 17-88 (524)
399 1jw9_B Molybdopterin biosynthe 47.6 14 0.00048 31.3 3.6 37 104-141 28-65 (249)
400 3kvo_A Hydroxysteroid dehydrog 47.5 58 0.002 28.8 7.9 38 102-139 40-77 (346)
401 4ej6_A Putative zinc-binding d 47.4 1.2E+02 0.004 26.8 9.9 76 99-180 175-261 (370)
402 4eyg_A Twin-arginine transloca 47.1 1.3E+02 0.0045 25.5 12.7 119 11-135 25-171 (368)
403 2glx_A 1,5-anhydro-D-fructose 46.9 43 0.0015 28.9 6.8 66 108-180 1-70 (332)
404 2i76_A Hypothetical protein; N 46.9 6.6 0.00022 33.7 1.3 62 108-180 3-66 (276)
405 3dfu_A Uncharacterized protein 46.8 21 0.00071 30.4 4.5 31 107-138 6-36 (232)
406 3gaz_A Alcohol dehydrogenase s 46.7 61 0.0021 28.3 7.8 70 105-180 149-224 (343)
407 3pid_A UDP-glucose 6-dehydroge 46.7 19 0.00065 33.5 4.5 67 105-182 330-405 (432)
408 1h6d_A Precursor form of gluco 46.5 41 0.0014 30.8 6.8 71 105-180 81-158 (433)
409 2qyt_A 2-dehydropantoate 2-red 46.0 51 0.0017 28.0 7.0 64 108-180 9-91 (317)
410 1q77_A Hypothetical protein AQ 46.0 20 0.00068 26.4 3.9 41 39-79 94-135 (138)
411 4da9_A Short-chain dehydrogena 45.8 37 0.0013 28.8 6.0 36 103-138 25-60 (280)
412 2xdq_A Light-independent proto 45.7 12 0.00039 34.8 2.9 116 16-138 213-347 (460)
413 3huu_A Transcription regulator 45.6 1.3E+02 0.0045 25.0 9.6 98 12-116 45-153 (305)
414 2axq_A Saccharopine dehydrogen 45.6 40 0.0014 31.5 6.6 70 104-180 20-96 (467)
415 4iiu_A 3-oxoacyl-[acyl-carrier 45.5 21 0.0007 29.9 4.3 35 104-138 23-57 (267)
416 1z7w_A Cysteine synthase; tran 44.9 65 0.0022 28.0 7.6 62 100-164 58-120 (322)
417 1jf8_A Arsenate reductase; ptp 44.9 34 0.0012 26.0 5.1 72 107-180 3-82 (131)
418 2czc_A Glyceraldehyde-3-phosph 44.6 35 0.0012 30.2 5.9 69 108-180 3-87 (334)
419 3v2h_A D-beta-hydroxybutyrate 44.5 32 0.0011 29.2 5.4 37 103-139 21-57 (281)
420 2pqm_A Cysteine synthase; OASS 44.2 54 0.0019 29.0 7.1 60 101-164 71-131 (343)
421 1jbq_A B, cystathionine beta-s 44.1 83 0.0028 29.1 8.5 62 99-164 152-214 (435)
422 2x5o_A UDP-N-acetylmuramoylala 43.9 18 0.00061 33.2 3.9 71 104-180 2-72 (439)
423 4h3v_A Oxidoreductase domain p 43.9 32 0.0011 30.1 5.5 68 106-180 5-83 (390)
424 3upl_A Oxidoreductase; rossman 43.8 1.4E+02 0.0049 27.7 10.1 80 95-178 10-113 (446)
425 1dbq_A Purine repressor; trans 43.5 1.3E+02 0.0045 24.5 9.2 119 11-133 24-158 (289)
426 3hn2_A 2-dehydropantoate 2-red 43.5 43 0.0015 29.0 6.2 64 108-180 3-77 (312)
427 3jyn_A Quinone oxidoreductase; 43.4 61 0.0021 27.9 7.2 71 105-180 139-217 (325)
428 3l4b_C TRKA K+ channel protien 43.2 82 0.0028 25.3 7.6 65 108-180 1-73 (218)
429 3d64_A Adenosylhomocysteinase; 43.1 57 0.0019 30.9 7.3 62 95-157 60-125 (494)
430 3qwb_A Probable quinone oxidor 43.0 79 0.0027 27.3 7.9 71 105-180 147-225 (334)
431 3v2g_A 3-oxoacyl-[acyl-carrier 42.8 61 0.0021 27.3 7.0 77 104-180 28-117 (271)
432 4fgw_A Glycerol-3-phosphate de 42.7 59 0.002 29.8 7.2 23 158-180 103-125 (391)
433 2r6j_A Eugenol synthase 1; phe 42.7 77 0.0026 26.8 7.7 71 108-180 12-87 (318)
434 1piw_A Hypothetical zinc-type 42.7 1.1E+02 0.0038 26.7 9.0 70 105-180 178-251 (360)
435 2rkb_A Serine dehydratase-like 42.7 41 0.0014 29.2 6.0 54 107-164 54-107 (318)
436 1tlt_A Putative oxidoreductase 42.3 77 0.0026 27.2 7.7 66 107-180 5-73 (319)
437 3fbs_A Oxidoreductase; structu 42.3 72 0.0025 26.2 7.3 51 105-157 139-189 (297)
438 3m9w_A D-xylose-binding peripl 41.5 57 0.0019 27.4 6.6 70 10-83 18-91 (313)
439 1gee_A Glucose 1-dehydrogenase 41.4 34 0.0012 28.2 5.0 36 104-139 4-39 (261)
440 3pc3_A CG1753, isoform A; CBS, 41.3 72 0.0025 29.9 7.8 62 99-164 104-166 (527)
441 3gqv_A Enoyl reductase; medium 41.3 1.5E+02 0.0051 26.1 9.6 70 105-180 163-239 (371)
442 3rss_A Putative uncharacterize 41.2 1.1E+02 0.0038 28.8 9.0 83 90-177 37-125 (502)
443 1y7t_A Malate dehydrogenase; N 41.2 39 0.0013 29.5 5.6 74 107-181 4-89 (327)
444 2uvd_A 3-oxoacyl-(acyl-carrier 41.1 38 0.0013 27.8 5.2 34 105-138 2-35 (246)
445 2c0c_A Zinc binding alcohol de 41.1 1.3E+02 0.0046 26.2 9.2 71 105-180 162-239 (362)
446 1p0f_A NADP-dependent alcohol 40.6 90 0.0031 27.4 8.0 70 105-180 190-269 (373)
447 3l6b_A Serine racemase; pyrido 40.5 40 0.0014 29.9 5.6 116 42-164 8-129 (346)
448 3d4o_A Dipicolinate synthase s 40.3 46 0.0016 28.6 5.8 63 103-179 1-65 (293)
449 3tbh_A O-acetyl serine sulfhyd 40.2 82 0.0028 27.7 7.6 61 100-164 63-125 (334)
450 3k4h_A Putative transcriptiona 40.2 1.5E+02 0.0052 24.2 10.3 69 11-83 30-100 (292)
451 4eye_A Probable oxidoreductase 40.1 74 0.0025 27.7 7.3 71 105-180 158-235 (342)
452 3c1a_A Putative oxidoreductase 40.1 30 0.001 29.8 4.6 65 107-180 10-77 (315)
453 3ih1_A Methylisocitrate lyase; 40.0 33 0.0011 30.4 4.9 36 46-81 181-218 (305)
454 3c1o_A Eugenol synthase; pheny 39.8 50 0.0017 28.0 6.0 73 107-180 4-85 (321)
455 4h27_A L-serine dehydratase/L- 39.8 40 0.0014 30.2 5.5 53 108-164 94-146 (364)
456 3e82_A Putative oxidoreductase 39.6 1E+02 0.0035 27.2 8.2 65 107-180 7-75 (364)
457 3l6u_A ABC-type sugar transpor 39.4 89 0.003 25.7 7.4 122 11-136 25-171 (293)
458 3ruf_A WBGU; rossmann fold, UD 39.4 58 0.002 27.9 6.4 77 105-182 23-110 (351)
459 1o58_A O-acetylserine sulfhydr 39.4 73 0.0025 27.4 7.0 48 115-165 72-119 (303)
460 3qk7_A Transcriptional regulat 39.3 1.1E+02 0.0037 25.4 8.0 68 11-83 27-96 (294)
461 2z2v_A Hypothetical protein PH 39.3 46 0.0016 29.8 5.9 67 106-180 15-85 (365)
462 3fbt_A Chorismate mutase and s 38.9 1.9E+02 0.0065 24.9 12.8 155 11-180 19-186 (282)
463 1gq2_A Malic enzyme; oxidoredu 38.9 16 0.00056 35.2 2.8 130 43-180 213-368 (555)
464 1fmc_A 7 alpha-hydroxysteroid 38.5 45 0.0015 27.1 5.3 36 104-139 8-43 (255)
465 1f06_A MESO-diaminopimelate D- 38.3 65 0.0022 28.1 6.6 62 107-180 3-66 (320)
466 3gbv_A Putative LACI-family tr 38.3 95 0.0032 25.5 7.4 103 10-114 25-142 (304)
467 3kty_A Probable methyltransfer 38.3 33 0.0011 27.4 4.2 73 105-180 8-89 (173)
468 1v3u_A Leukotriene B4 12- hydr 38.1 1.7E+02 0.006 24.9 9.4 70 105-180 144-222 (333)
469 2ioj_A Hypothetical protein AF 37.8 1E+02 0.0034 23.3 6.9 85 66-158 9-100 (139)
470 2d8a_A PH0655, probable L-thre 37.6 54 0.0018 28.6 5.9 70 105-180 166-244 (348)
471 3g1w_A Sugar ABC transporter; 37.3 1.6E+02 0.0054 24.3 8.7 68 11-82 21-93 (305)
472 1e3i_A Alcohol dehydrogenase, 37.1 1.3E+02 0.0046 26.3 8.6 70 105-180 194-273 (376)
473 1v8b_A Adenosylhomocysteinase; 37.0 1E+02 0.0035 29.0 8.0 63 94-156 30-96 (479)
474 1p77_A Shikimate 5-dehydrogena 36.9 1.9E+02 0.0065 24.3 9.8 164 4-180 6-188 (272)
475 1f2d_A 1-aminocyclopropane-1-c 36.9 48 0.0017 29.1 5.5 56 108-164 68-133 (341)
476 3sc4_A Short chain dehydrogena 36.8 1.5E+02 0.0051 24.8 8.6 36 104-139 6-41 (285)
477 3gdg_A Probable NADP-dependent 36.6 27 0.00091 29.0 3.6 36 104-139 17-54 (267)
478 2gas_A Isoflavone reductase; N 36.6 48 0.0016 27.8 5.3 74 107-181 2-85 (307)
479 4hv4_A UDP-N-acetylmuramate--L 36.5 80 0.0027 29.4 7.2 67 107-180 22-89 (494)
480 3n0w_A ABC branched chain amin 36.5 2E+02 0.0069 24.6 11.7 114 11-135 26-174 (379)
481 3aey_A Threonine synthase; PLP 36.4 66 0.0023 28.4 6.4 54 109-164 78-131 (351)
482 4d9i_A Diaminopropionate ammon 36.4 56 0.0019 29.5 6.0 52 110-164 114-165 (398)
483 1i4n_A Indole-3-glycerol phosp 36.3 60 0.002 27.8 5.8 114 15-137 30-156 (251)
484 3ond_A Adenosylhomocysteinase; 36.2 1.2E+02 0.004 28.7 8.2 64 94-157 41-107 (488)
485 3eaf_A ABC transporter, substr 36.2 2.1E+02 0.0072 24.7 11.1 79 52-135 75-174 (391)
486 1g0o_A Trihydroxynaphthalene r 36.2 49 0.0017 27.8 5.3 36 104-139 26-61 (283)
487 3ojo_A CAP5O; rossmann fold, c 36.2 96 0.0033 28.6 7.6 64 106-180 10-91 (431)
488 1vj0_A Alcohol dehydrogenase, 36.0 1.3E+02 0.0044 26.6 8.3 70 105-180 194-275 (380)
489 3ctm_A Carbonyl reductase; alc 36.0 66 0.0023 26.7 6.0 75 104-180 31-119 (279)
490 3egc_A Putative ribose operon 35.9 85 0.0029 25.9 6.7 102 11-116 25-134 (291)
491 4dmm_A 3-oxoacyl-[acyl-carrier 35.9 71 0.0024 26.7 6.3 35 104-138 25-59 (269)
492 3vc3_A Beta-cyanoalnine syntha 35.9 1.1E+02 0.0037 27.1 7.7 62 100-164 78-140 (344)
493 3goh_A Alcohol dehydrogenase, 35.7 98 0.0033 26.4 7.2 66 105-179 141-206 (315)
494 2iks_A DNA-binding transcripti 35.5 1.7E+02 0.006 23.9 8.7 118 11-132 37-169 (293)
495 1cdo_A Alcohol dehydrogenase; 35.3 1.4E+02 0.0047 26.2 8.3 70 105-180 191-270 (374)
496 4aec_A Cysteine synthase, mito 35.3 58 0.002 30.2 5.9 61 100-164 166-228 (430)
497 3ce6_A Adenosylhomocysteinase; 35.3 1.8E+02 0.0061 27.4 9.4 62 94-155 44-108 (494)
498 3ijp_A DHPR, dihydrodipicolina 35.3 32 0.0011 30.2 4.0 71 106-177 20-93 (288)
499 4hp8_A 2-deoxy-D-gluconate 3-d 35.2 1.2E+02 0.004 25.8 7.5 73 104-179 6-86 (247)
500 3abi_A Putative uncharacterize 35.2 62 0.0021 28.6 6.0 68 105-180 12-85 (365)
No 1
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.3e-95 Score=663.78 Aligned_cols=259 Identities=37% Similarity=0.653 Sum_probs=249.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 39 la~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 118 (307)
T 3tpf_A 39 LAMIFEKNSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVIN 118 (307)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHHSSEEEEECSCHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCcchHHhHHHHHHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChHHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----Hh
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KA 155 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~ 155 (261)
|+++++||||+|+|+|||+|++|+++ |+||+||||.+||+|||+.+++++|++|++++|++|.|+++++++++ +.
T Consensus 119 ag~~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~ 198 (307)
T 3tpf_A 119 ALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALIS 198 (307)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHc
Confidence 98889999999999999999999999 99999999999999999999999999999999999999998877666 56
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccC
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEA 235 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~ 235 (261)
| .++++++|+++|+++|||||||+|.||+++++.+++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++
T Consensus 199 g-~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~eV~d~ 277 (307)
T 3tpf_A 199 G-AKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK 277 (307)
T ss_dssp T-CEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHHH
T ss_pred C-CeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHHHhCC
Confidence 7 589999999999999999999999999987766777889999999999999999999999999999999999999999
Q ss_pred CCcchHhHHhccHHHHHHHHHHHhc
Q 024871 236 PYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 236 ~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+|+||+||+||+|+|||||+++||
T Consensus 278 p~s~if~QaeNrl~~r~AlL~~ll~ 302 (307)
T 3tpf_A 278 HADVIFEEARNRLYVVKALLCFLDN 302 (307)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHcCHHHHHHHHHHHhh
Confidence 9999999999999999999999987
No 2
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00 E-value=5.7e-95 Score=663.57 Aligned_cols=259 Identities=53% Similarity=0.917 Sum_probs=248.1
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||+||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 49 la~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 128 (315)
T 1pvv_A 49 LAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVIN 128 (315)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----HhC
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KAG 156 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~g 156 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|+++++++|++|.|+++++++++ +.|
T Consensus 129 a~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g 208 (315)
T 1pvv_A 129 GLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESG 208 (315)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcC
Confidence 9888999999999999999999999999999999999999999999999999999999999999998877665 667
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAP 236 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~ 236 (261)
+++++++|++||+++|||||||+|.+|+++++..++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++|
T Consensus 209 -~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~eV~d~p 287 (315)
T 1pvv_A 209 -GSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSP 287 (315)
T ss_dssp -CEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTST
T ss_pred -CeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHHHhCCC
Confidence 5899999999999999999999999999865555567889999999999999999999999999999999999999999
Q ss_pred CcchHhHHhccHHHHHHHHHHHhc
Q 024871 237 YSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 237 ~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|+||+||+||+|+|||||+++||
T Consensus 288 ~s~vf~QaeNrl~~r~AlL~~ll~ 311 (315)
T 1pvv_A 288 NSVVWDQAENRLHAQKAVLALVMG 311 (315)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHhhCHHHHHHHHHHHhc
Confidence 999999999999999999999986
No 3
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=100.00 E-value=6.1e-95 Score=661.31 Aligned_cols=260 Identities=43% Similarity=0.737 Sum_probs=247.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 42 l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 121 (307)
T 2i6u_A 42 VAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVIN 121 (307)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----Hh
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KA 155 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~ 155 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++|+++++++|++|.|+++++++++ +.
T Consensus 122 a~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~ 201 (307)
T 2i6u_A 122 ALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDT 201 (307)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCccHHHHHHHHHHHHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998 9999999999999999999999999999998877665 66
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccC
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEA 235 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~ 235 (261)
| +++++++|++||+++|||||||+|.+|+|+++.+++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++
T Consensus 202 G-~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~eV~d~ 280 (307)
T 2i6u_A 202 G-ASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDG 280 (307)
T ss_dssp T-CCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHTS
T ss_pred C-CeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHhHhCC
Confidence 7 579999999999999999999999999986554445678899999999999999999999999999999999999999
Q ss_pred CCcchHhHHhccHHHHHHHHHHHhcC
Q 024871 236 PYSIVFPQAENRMHAQNAIMLHALGL 261 (261)
Q Consensus 236 ~~s~~~~Qa~N~l~~r~All~~~l~~ 261 (261)
|+|+||+||+||+|+|||||+++||.
T Consensus 281 p~s~if~QaeN~l~~r~AlL~~ll~~ 306 (307)
T 2i6u_A 281 PASAVWDEAENRLHAQKALLVWLLER 306 (307)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHhcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999873
No 4
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=100.00 E-value=1.6e-94 Score=661.48 Aligned_cols=259 Identities=45% Similarity=0.792 Sum_probs=232.3
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 51 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVIN 130 (323)
T 3gd5_A 51 LGLVFLKASTRTRVSFTVAMYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVIN 130 (323)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEE
T ss_pred EEEEecCCCcchHhhHHHHHHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH----hC
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK----AG 156 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~----~g 156 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|++|++++|++|.|++++++++++ .|
T Consensus 131 ag~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g 210 (323)
T 3gd5_A 131 ALTDHEHPCQVVADLLTIRENFGRLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTG 210 (323)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC
Confidence 98899999999999999999999999999999999999999999999999999999999999999998877653 56
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAP 236 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~ 236 (261)
.++++++|++||+++|||||||+|.+|+++++.+++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++|
T Consensus 211 -~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~eV~d~p 289 (323)
T 3gd5_A 211 -AEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEGP 289 (323)
T ss_dssp -CCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHHST
T ss_pred -CeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHHHhCCC
Confidence 5899999999999999999999999999876555677889999999999999999999999999999999999999999
Q ss_pred CcchHhHHhccHHHHHHHHHHHhc
Q 024871 237 YSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 237 ~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|+||+||+||+|+|||||+++||
T Consensus 290 ~S~if~QaeNrl~~r~AlL~~ll~ 313 (323)
T 3gd5_A 290 RSRIWDEAENRLHAQKAVLAALMG 313 (323)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHhccHHHHHHHHHHHhc
Confidence 999999999999999999999987
No 5
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=4.3e-95 Score=662.46 Aligned_cols=257 Identities=45% Similarity=0.771 Sum_probs=236.7
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|++++|||||
T Consensus 48 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 127 (309)
T 4f2g_A 48 LAMIFEKSSTRTRLSFEAGIFQLGGHAVFMSTRDTQLGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVIN 127 (309)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECCSSCEETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEE
T ss_pred EEEEecCCChhhHhhHHHHHHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKI 160 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i 160 (261)
|+|+++||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|++|++++|++|.|+++++ +++.| .++
T Consensus 128 ag~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~--~~~~g-~~v 204 (309)
T 4f2g_A 128 GLTNEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLV--DAESA-PFY 204 (309)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGS--CGGGG-GGE
T ss_pred CCCCccCcHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHH--HHHcC-CeE
Confidence 999999999999999999999999999999999999999999999999999999999999999998765 23556 579
Q ss_pred EEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCCCcch
Q 024871 161 EITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAPYSIV 240 (261)
Q Consensus 161 ~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~~s~~ 240 (261)
++++|++||+++|||||||+|.||+|+++.+++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++|+|+|
T Consensus 205 ~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~eV~d~p~s~i 284 (309)
T 4f2g_A 205 QVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTAGVIDGPQSVV 284 (309)
T ss_dssp EECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCHHHHTSTTBCH
T ss_pred EEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecHHHhCCCcchH
Confidence 99999999999999999999999998765566778899999999999999999999999999999999999999999999
Q ss_pred HhHHhccHHHHHHHHHHHhc
Q 024871 241 FPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 241 ~~Qa~N~l~~r~All~~~l~ 260 (261)
|+||+||+|+|||||+++||
T Consensus 285 f~QaeN~l~~r~AlL~~ll~ 304 (309)
T 4f2g_A 285 WDEAENRLHVQKALMEFLLL 304 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHh
Confidence 99999999999999999986
No 6
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=7e-94 Score=658.12 Aligned_cols=258 Identities=43% Similarity=0.734 Sum_probs=239.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||+|+++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 61 la~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVIN 140 (325)
T 1vlv_A 61 LAMIFEKRSTRTRLAFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYN 140 (325)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEE
T ss_pred EEEEeccCCcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----Hh
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KA 155 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~ 155 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++|++|++++|++|.|+++++++++ +.
T Consensus 141 a~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~ 220 (325)
T 1vlv_A 141 GLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKET 220 (325)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 998999999999999999999999999999999998 8999999999999999999999999999998877665 66
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhc-CCCcEEeeCCCCCCCccccccccc
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLA-GPKAYFMHCLPAERGVEVTEGVIE 234 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a-~~~~~~mH~lP~~rg~Ev~~~v~~ 234 (261)
| +++++++|++||+++|||||||+|.+|+++++.+++.+++.+||||+++|+.+ ++|++||||||+|||+||+++|++
T Consensus 221 G-~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~eV~d 299 (325)
T 1vlv_A 221 D-GSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIE 299 (325)
T ss_dssp C-CEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHT
T ss_pred C-CeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHHHhC
Confidence 7 58999999999999999999999999998665556678889999999999999 999999999999999999999999
Q ss_pred CCCcchHhHHhccHHHHHHHHHHHh
Q 024871 235 APYSIVFPQAENRMHAQNAIMLHAL 259 (261)
Q Consensus 235 ~~~s~~~~Qa~N~l~~r~All~~~l 259 (261)
+|+|+||+||+||+|+|||||+++|
T Consensus 300 ~p~S~if~QaeNrl~~rmAlL~~ll 324 (325)
T 1vlv_A 300 GKQSRVWDEAENRKHTIKAVMIATL 324 (325)
T ss_dssp STTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHhccHHHHHHHHHHHh
Confidence 9999999999999999999999886
No 7
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=100.00 E-value=5.7e-94 Score=660.92 Aligned_cols=258 Identities=47% Similarity=0.802 Sum_probs=237.3
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|++++|||||
T Consensus 73 la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVIN 152 (340)
T 4ep1_A 73 LGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVIN 152 (340)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEEESCC------CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----HhC
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KAG 156 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~g 156 (261)
|+++.+||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|++|++++|++|.|++++++.++ +.|
T Consensus 153 ag~~~~HPtQaLaDl~TI~E~~G~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G 232 (340)
T 4ep1_A 153 GLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETG 232 (340)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC
Confidence 9888999999999999999999999999999999999999999999999999999999999999999887765 567
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAP 236 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~ 236 (261)
+++++++|++||+++|||||||+|.+|+++++ .++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++|
T Consensus 233 -~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~-~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~eV~d~p 310 (340)
T 4ep1_A 233 -AEIEILHNPELAVNEADFIYTDVWMSMGQEGE-EEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGP 310 (340)
T ss_dssp -CCEEEESCHHHHHTTCSEEEECCC------CH-HHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHTST
T ss_pred -CeEEEECCHHHHhCCCCEEEecCccCCCCCch-HHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHHHhCCC
Confidence 58999999999999999999999999998766 5677888999999999999999999999999999999999999999
Q ss_pred CcchHhHHhccHHHHHHHHHHHhc
Q 024871 237 YSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 237 ~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|+||+||+||+|+|||||+++||
T Consensus 311 ~S~if~QaeNrl~~rmAlL~~ll~ 334 (340)
T 4ep1_A 311 QSIVFEQAGNRLHAQKALLVSLFK 334 (340)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhHHHHHhcCHHHHHHHHHHHhc
Confidence 999999999999999999999997
No 8
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=4e-94 Score=654.01 Aligned_cols=254 Identities=46% Similarity=0.771 Sum_probs=237.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.|+++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 48 ~~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVIN 127 (301)
T 2ef0_A 48 LALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVN 127 (301)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEeccCCcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHhCCEEEEecCChHHHHHHHHHCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKI 160 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i 160 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|+++++++|++|.|+++++++++ +
T Consensus 128 a~~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~------~ 201 (301)
T 2ef0_A 128 ALSDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRAN------A 201 (301)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHT------C
T ss_pred CCCCccCchHHHHHHHHHHHHhCCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhce------e
Confidence 9999999999999999999999999999999999999999999999999999999999999999988776552 6
Q ss_pred EEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCCCcch
Q 024871 161 EITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAPYSIV 240 (261)
Q Consensus 161 ~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~~s~~ 240 (261)
++++|+++|+++|||||||+|.+|+|+++..++.+++.+||||.++|+.+++|++||||||+|||+||+++|+++|+|+|
T Consensus 202 ~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~eV~d~p~s~i 281 (301)
T 2ef0_A 202 FFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRV 281 (301)
T ss_dssp EEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCH
T ss_pred EEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHHHhCCCcchH
Confidence 78999999999999999999999998766556678899999999999999999999999999999999999999999999
Q ss_pred HhHHhccHHHHHHHHHHHhc
Q 024871 241 FPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 241 ~~Qa~N~l~~r~All~~~l~ 260 (261)
|+||+||+|+|||||+++||
T Consensus 282 f~QaeN~l~~rmAlL~~ll~ 301 (301)
T 2ef0_A 282 FDQAENRLHTAKAVLLTLLK 301 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCHHHHHHHHHHHhC
Confidence 99999999999999999986
No 9
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=100.00 E-value=2.4e-93 Score=657.46 Aligned_cols=258 Identities=44% Similarity=0.743 Sum_probs=246.2
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||.||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 66 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVIN 145 (339)
T 4a8t_A 66 LGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVIN 145 (339)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHHCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCchHHHHHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHh--C-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----
Q 024871 81 GLTDYNHPCQIMADALTIIEHV--G-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR---- 153 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~--g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~---- 153 (261)
|+++.+||||+|+|+|||+|++ | +++|+||+||||++||+|||+.+++++|++|++++|++|.|+++++++++
T Consensus 146 ag~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~ 225 (339)
T 4a8t_A 146 GMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCE 225 (339)
T ss_dssp CCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHH
Confidence 9999999999999999999999 8 89999999999999999999999999999999999999999999887765
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHH-HHHHhhhcC-CcccHHHHHhcCCCcEEeeCCCCCCCcccccc
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEA-AYRKQAFQG-FQVDEFLMKLAGPKAYFMHCLPAERGVEVTEG 231 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~-~~~~~~~~~-y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~ 231 (261)
+.| .++++++|++ |+++|||||||+|.||||+++. +++.+++.+ ||||.++|+.+++|++||||||+|||+||+++
T Consensus 226 ~~g-~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~e 303 (339)
T 4a8t_A 226 VSG-GSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 303 (339)
T ss_dssp HHC-CEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred HcC-CEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 456 5899999999 9999999999999999987765 566777887 99999999999999999999999999999999
Q ss_pred cccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 232 VIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 232 v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+++|+|+||+||+||+|+|||||+++||
T Consensus 304 V~d~p~S~if~QaeNrl~~r~AlL~~ll~ 332 (339)
T 4a8t_A 304 VIDGKNSICFDEAENRLTSIRGLLVYLMN 332 (339)
T ss_dssp HHTSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCcchHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999986
No 10
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=100.00 E-value=3.5e-93 Score=655.41 Aligned_cols=260 Identities=42% Similarity=0.669 Sum_probs=248.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||+||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 47 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVIN 126 (333)
T 1duv_G 47 IALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWN 126 (333)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHSSCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHhCCEEEEEcCCchHHHHHHHhCCCCeEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHH-hC-CCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----
Q 024871 81 GLTDYNHPCQIMADALTIIEH-VG-RLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR---- 153 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~-~g-~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~---- 153 (261)
|+++++||||+|+|+|||+|+ +| .++|+||+||||+ +||+|||+.+++++|++|++++|++|.|+++++++++
T Consensus 127 a~~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~ 206 (333)
T 1duv_G 127 GLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQ 206 (333)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHH
Confidence 999999999999999999999 99 9999999999998 8999999999999999999999999999998877665
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHH-HHHHHhhhcCCcccHHHHHhc-CCCcEEeeCCCCC--------
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEE-AAYRKQAFQGFQVDEFLMKLA-GPKAYFMHCLPAE-------- 223 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~-~~~~~~~~~~y~v~~~~~~~a-~~~~~~mH~lP~~-------- 223 (261)
+.| +++++++|+++|+++|||||||+|.|||++++ ..++.+++.+||||.++|+.+ ++|++||||||++
T Consensus 207 ~~G-~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP~~h~~~t~~~ 285 (333)
T 1duv_G 207 QNG-GNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLG 285 (333)
T ss_dssp HTT-CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCCSSCSHHH
T ss_pred HcC-CeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCCCCCccccccc
Confidence 566 58999999999999999999999999998665 556778899999999999999 9999999999999
Q ss_pred ----------CCcccccccccCCCcchHhHHhccHHHHHHHHHHHhcC
Q 024871 224 ----------RGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALGL 261 (261)
Q Consensus 224 ----------rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~~ 261 (261)
||+||+++|+++|+|+||+||+||+|+|||||+++||.
T Consensus 286 ~~~~~~~~~~Rg~EIt~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~~ 333 (333)
T 1duv_G 286 KKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK 333 (333)
T ss_dssp HHHHHHTTCCSBSSBBHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhccccCCCCceeCHHHhCCCcchHHHHHhccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999974
No 11
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=100.00 E-value=2.8e-93 Score=656.51 Aligned_cols=259 Identities=44% Similarity=0.710 Sum_probs=248.5
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||+||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 48 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVIN 127 (335)
T 1dxh_A 48 IALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFN 127 (335)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEE
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCEEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----H
Q 024871 81 GLTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----K 154 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~ 154 (261)
|+++++||||+|+|+|||+|++| .++|+||+||||+ +||+|||+.+++++|++|++++|++|.|+++++++++ +
T Consensus 128 a~~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~ 207 (335)
T 1dxh_A 128 GLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEE 207 (335)
T ss_dssp EECSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999998 8999999999999999999999999999998877665 6
Q ss_pred hCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHH-HHHHHhhhcCCcccHHHHHhc-CCCcEEeeCCCCC---------
Q 024871 155 AGISKIEITNDPKEVVQGADVVYSDVWASMGQKEE-AAYRKQAFQGFQVDEFLMKLA-GPKAYFMHCLPAE--------- 223 (261)
Q Consensus 155 ~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~-~~~~~~~~~~y~v~~~~~~~a-~~~~~~mH~lP~~--------- 223 (261)
.| +++++++|+++|+++|||||||+|.|||++++ ..++.+++.+||||.++|+.+ ++|++||||||++
T Consensus 208 ~G-~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP~~h~~~t~~~~ 286 (335)
T 1dxh_A 208 SG-AKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGK 286 (335)
T ss_dssp HT-CEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSCCCCSSSSHHHH
T ss_pred cC-CeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCCCCCccccccch
Confidence 67 58999999999999999999999999998665 456678899999999999999 9999999999999
Q ss_pred ----------CCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 224 ----------RGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 224 ----------rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
||+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 287 ~~~~~~~~~~Rg~EIt~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~ 333 (335)
T 1dxh_A 287 QIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLA 333 (335)
T ss_dssp HHHHHCGGGGGBSSBBHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhhhcccCCCCcEecHHHhCCccchHHHHHhhhHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999987
No 12
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=100.00 E-value=7.1e-93 Score=650.85 Aligned_cols=258 Identities=46% Similarity=0.756 Sum_probs=245.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|+++++||||
T Consensus 49 l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 128 (321)
T 1oth_A 49 LGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIIN 128 (321)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----HhC
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KAG 156 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~g 156 (261)
|+++++||||+|+|+|||+|++|+++|+||+||||++||+|||+.+++++|++|++++|++|.|+++++++++ +.|
T Consensus 129 a~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G 208 (321)
T 1oth_A 129 GLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENG 208 (321)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887665 456
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAP 236 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~ 236 (261)
+.+++++|+++|+++|||||||+|.+|+++++...+.+++.+||||.++|+.+++|++||||||++| +||+++|+++|
T Consensus 209 -~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP~~r-~EI~~eV~d~p 286 (321)
T 1oth_A 209 -TKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPRKP-EEVDDEVFYSP 286 (321)
T ss_dssp -CCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCCCT-TTBCHHHHTST
T ss_pred -CeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCCCCC-cccCHHHhCCc
Confidence 5799999999999999999999999999765544556678999999999999999999999999988 99999999999
Q ss_pred CcchHhHHhccHHHHHHHHHHHhc
Q 024871 237 YSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 237 ~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|+||+||+||+|+|||||+++||
T Consensus 287 ~S~if~QaeNrl~~rmAlL~~ll~ 310 (321)
T 1oth_A 287 RSLVFPEAENRKWTIMAVMVSLLT 310 (321)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHhcHHHHHHHHHHHHh
Confidence 999999999999999999999986
No 13
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00 E-value=2e-93 Score=656.23 Aligned_cols=258 Identities=38% Similarity=0.659 Sum_probs=232.3
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEE--eCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcE
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIY--LGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPV 78 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~--l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPV 78 (261)
++++|||||||||+|||+|+++|||++++ +++ +||++||||++||+|+||+|+|+||+||+.++.++++|++++|||
T Consensus 47 la~lF~e~STRTR~SFE~A~~~LGg~~i~~~l~~-~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPV 125 (328)
T 3grf_A 47 LLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGA-NSNVGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPC 125 (328)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC-----------CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCE
T ss_pred EEEEecCCCchHHHHHHHHHHHCCCeEEccccCc-cccCCCCCCHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCE
Confidence 58999999999999999999999999999 999 999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCChhHHHHHHHHHHHHhC-------CCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCC--CCHHH
Q 024871 79 INGLTDYNHPCQIMADALTIIEHVG-------RLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFE--PDKET 148 (261)
Q Consensus 79 INa~~~~~HPtQ~L~Dl~Ti~e~~g-------~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~--~~~~~ 148 (261)
|||+++++||||+|+|+|||+|++| +++|+||+||||+ +||+|||+.+++++|++|++++|++|. |++++
T Consensus 126 INag~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~ 205 (328)
T 3grf_A 126 INALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEV 205 (328)
T ss_dssp EESSCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHH
T ss_pred EeCCCCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHH
Confidence 9998889999999999999999999 8999999999998 899999999999999999999999999 99998
Q ss_pred HHHHHH------hCCCeEEEEcCHHHHhCCCCEEEEecccCcc-hhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCC
Q 024871 149 VEKARK------AGISKIEITNDPKEVVQGADVVYSDVWASMG-QKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLP 221 (261)
Q Consensus 149 ~~~~~~------~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~-~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP 221 (261)
++.+++ .| .++++++|+++|+++|||||||+|.||+ |+|+++++.+++.+||||.++|+.+++|++||||||
T Consensus 206 ~~~~~~~~~~~~~g-~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lP 284 (328)
T 3grf_A 206 IDECEEIIAKHGTG-GSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLP 284 (328)
T ss_dssp HHHHHHHHHHHTCC-CEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSC
T ss_pred HHHHHHHHhhccCC-CeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCC
Confidence 877765 35 6899999999999999999999999999 988876778889999999999999999999999999
Q ss_pred CCCCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 222 AERGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 222 ~~rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|||+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 285 a~Rg~EI~~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~ 323 (328)
T 3grf_A 285 ATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAVLDFFLH 323 (328)
T ss_dssp CCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCccCHHHhCCCchhHHHHHhhCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987
No 14
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=100.00 E-value=5.3e-93 Score=657.77 Aligned_cols=258 Identities=44% Similarity=0.743 Sum_probs=247.0
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||.||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 44 la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ssl~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVIN 123 (355)
T 4a8p_A 44 LGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVIN 123 (355)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEECBTTBCBTTTBCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCChhhHhhHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHh--C-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----
Q 024871 81 GLTDYNHPCQIMADALTIIEHV--G-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR---- 153 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~--g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~---- 153 (261)
|+++++||||+|+|+|||+|++ | +++|+||+||||++||+|||+.+++++|++|++++|++|.|+++++++++
T Consensus 124 ag~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~ 203 (355)
T 4a8p_A 124 GMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCE 203 (355)
T ss_dssp CCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHH
Confidence 9999999999999999999999 8 89999999999999999999999999999999999999999999887765
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHH-HHHHhhhcC-CcccHHHHHhcCCCcEEeeCCCCCCCcccccc
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEA-AYRKQAFQG-FQVDEFLMKLAGPKAYFMHCLPAERGVEVTEG 231 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~-~~~~~~~~~-y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~ 231 (261)
+.| .++++++|++ |+++|||||||+|.||||+++. .++.+++.+ ||||.++|+.+++|++||||||+|||+||+++
T Consensus 204 ~~G-~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 204 VSG-GSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp HHS-CEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred HcC-CeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 456 5899999999 9999999999999999987764 566777887 99999999999999999999999999999999
Q ss_pred cccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 232 VIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 232 v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+++|+|+||+||+||+|+|||||+++||
T Consensus 282 V~d~p~S~if~QaeNrl~~r~AlL~~ll~ 310 (355)
T 4a8p_A 282 VIDGKNSICFDEAENRLTSIRGLLVYLMN 310 (355)
T ss_dssp HHTSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCcchHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999986
No 15
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=100.00 E-value=1.4e-92 Score=657.11 Aligned_cols=259 Identities=40% Similarity=0.639 Sum_probs=248.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||+||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 74 va~lF~e~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVIN 153 (365)
T 4amu_A 74 IAILFQKDSTRTRCAFEVAASDLGAGVTYIGPSGSNMGKKESIEDTAKVLGRFYDGIEFRGFAQSDVDALVKYSGVPVWN 153 (365)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHHTCEEEEECHHHHCCSSSSCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHHCSCEEE
T ss_pred EEEEecCCCchHHHHHHHHHHhCCCEEEEcCCccccCCCCcCHHHHHHHHHhhCcEEEEecCChhHHHHHHHhCCCCEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCC--CHHHHHHHH----
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEP--DKETVEKAR---- 153 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~--~~~~~~~~~---- 153 (261)
|+|+.+||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++|++|++++|++|.| ++++++.++
T Consensus 154 a~~~~~HPtQaLaDl~Ti~E~~G~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~ 233 (365)
T 4amu_A 154 GLTDDEHPTQIIADFMTMKEKFGNLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFK 233 (365)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSSCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999999999999999999 998887654
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHH-HHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC--------
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEE-AAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER-------- 224 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~-~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r-------- 224 (261)
+.| .++++++|+++|+++|||||||+|.||+++++ ..++.+++.+||||.++|+.+++|++||||||++|
T Consensus 234 ~~g-~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP~~R~~~t~~~~ 312 (365)
T 4amu_A 234 RNG-GSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLPAFHDDHTSFSK 312 (365)
T ss_dssp HHS-CEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSCCCCSSCSHHHH
T ss_pred HcC-CEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCccccchhh
Confidence 456 58999999999999999999999999998776 56778899999999999999999999999999999
Q ss_pred ----------------CcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 225 ----------------GVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 225 ----------------g~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 313 ~~~~~~~~~~~~~~~~g~EIt~eV~d~p~S~if~QaeNrl~~~kAvL~~llg 364 (365)
T 4amu_A 313 EVATTLGAKYPIVAKGEMEVTDEVFQSLHNKAFDQAENRMHSIKAIILSTIG 364 (365)
T ss_dssp HHHHHSSSSCGGGGGSCCSBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhhcccccccccCCCcEecHHHhCCCcchhHhHHhcCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998
No 16
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=100.00 E-value=3.5e-92 Score=652.61 Aligned_cols=258 Identities=42% Similarity=0.662 Sum_probs=247.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||+||++|||+++++++++||++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 70 la~lF~e~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVIN 149 (359)
T 2w37_A 70 IALLFEKSSTRTRSAFTTASIDLGAHPEYLGQNDIQLGKKESTSDTAKVLGSMFDGIEFRGFKQSDAEILARDSGVPVWN 149 (359)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHHCSEEEEESSCHHHHHHHHHHSSSCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhcCEEEEecCChHHHHHHHHhCCCCEEc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----Hh
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR----KA 155 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~----~~ 155 (261)
|+++.+||||+|+|+|||+|++|.|+|+||+||||+ +||+|||+.+++++|++|++++|++|.|+++++++++ +.
T Consensus 150 a~~~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~ 229 (359)
T 2w37_A 150 GLTDEWHPTQMLADFMTVKENFGKLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKS 229 (359)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCccHHHHHHHHHHHHhCCcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998 8999999999999999999999999999998877665 66
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcC---CCcEEeeCCCCC---------
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAG---PKAYFMHCLPAE--------- 223 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~---~~~~~mH~lP~~--------- 223 (261)
| +++++++|++||+++|||||||+|.||||+ +..++.+++.+||||.++|+.++ +|++||||||++
T Consensus 230 G-~~v~~~~d~~eav~~aDvvytd~w~smg~e-e~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP~~h~~~t~~g~ 307 (359)
T 2w37_A 230 G-AKLVITDDLDEGLKGSNVVYTDVWVSMGES-NWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLPAFHNTDTQYGK 307 (359)
T ss_dssp T-CCEEEESCHHHHHTTCSEEEECCSCCTTCT-THHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSCCCCSSCSHHHH
T ss_pred C-CeEEEEeCHHHHhcCCCEEEEccccccccc-chHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCCCCcccccccch
Confidence 7 579999999999999999999999999986 34566788999999999999999 999999999999
Q ss_pred --------CCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 224 --------RGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 224 --------rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
||+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 308 ~~~~~~~~Rg~EIt~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~ 352 (359)
T 2w37_A 308 EIKEKYGITEMEVTDEVFTSKYARQFEEAENRMHSIKAMMAATLG 352 (359)
T ss_dssp HHHHHHCCCCCSBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhhccCCCCceecHHHhCCCcchHHHHHhhhHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999987
No 17
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=100.00 E-value=5.3e-91 Score=644.92 Aligned_cols=257 Identities=41% Similarity=0.604 Sum_probs=235.1
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
+++||||||||||+|||.||++|||++++++++++|++||||++||+||||+|+|+||+||+.++.++++|++++|||||
T Consensus 69 va~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVIN 148 (353)
T 3sds_A 69 VAMMFSKRSTRTRVSTEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSMVSCIVARVGPHSDIANLAKHSSVPVIN 148 (353)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTSCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCchhHHHHHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHhcCEEEEEeCChHHHHHHHhhCCCCEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCC-------------CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHH
Q 024871 81 GLTDYNHPCQIMADALTIIEHVGRL-------------EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKE 147 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g~l-------------~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~ 147 (261)
|+++.+||||+|+|+|||+|+||.+ +|+||+||||++||+|||+.+++++|++|++++|++|+|+++
T Consensus 149 ag~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~ 228 (353)
T 3sds_A 149 ALCDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSH 228 (353)
T ss_dssp EECSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHH
Confidence 9888999999999999999999987 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh------CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHh--cCCCcEEeeC
Q 024871 148 TVEKARKA------GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKL--AGPKAYFMHC 219 (261)
Q Consensus 148 ~~~~~~~~------g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~--a~~~~~~mH~ 219 (261)
+++++++. | +.+++++|++||+++|||||||+|.||+++++..++.+++.+||||.++|+. +++|++||||
T Consensus 229 i~~~~~~~a~~~~~g-~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHc 307 (353)
T 3sds_A 229 IVELIQKAREGVQSP-GNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHC 307 (353)
T ss_dssp HHHHHHHHHTTCSSC-CCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEEC
T ss_pred HHHHHHHhhhhccCC-CeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECC
Confidence 98887764 4 5789999999999999999999999999876655677788999999999999 8999999999
Q ss_pred CCCCCCcccccccccCCCcchHhHHhccHHHHHHHHHHHh
Q 024871 220 LPAERGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHAL 259 (261)
Q Consensus 220 lP~~rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l 259 (261)
||++| +||+++|+++|+|+||+||+||+|+|||||++++
T Consensus 308 LP~~~-~EI~~eV~d~p~S~if~QaeNrl~~rmAlL~~~l 346 (353)
T 3sds_A 308 LPRHP-EEVSDEVFYSERSLVFPEAENRLWAAISALEAFV 346 (353)
T ss_dssp SCCCT-TTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC-CeECHHHhCCCcchHHHHHhhcHHHHHHHHHHHH
Confidence 99986 8999999999999999999999999999999987
No 18
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=5.5e-90 Score=628.93 Aligned_cols=255 Identities=28% Similarity=0.367 Sum_probs=239.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCC-cCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEE
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDD-IQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVI 79 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~-s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVI 79 (261)
++++|||||||||+|||.||++|||+++++++.+ |+++||||++||+|+||+|+|+||+||+.++.++++|+++++|||
T Consensus 47 l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVI 126 (308)
T 1ml4_A 47 LATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVI 126 (308)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEE
T ss_pred EEEEecCCCchHHHHHHHHHHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999998876 789999999999999999999999999999999999999999999
Q ss_pred eCC-CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 80 NGL-TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 80 Na~-~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
||+ |+++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++|++|++++|++|.|++++++++++.|
T Consensus 127 Nag~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g 206 (308)
T 1ml4_A 127 NAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKG 206 (308)
T ss_dssp EEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTT
T ss_pred eCccCCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcC
Confidence 986 5999999999999999999999999999999998 5899999999999999999999999999999999999888
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccC--cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCccccccccc
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWAS--MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIE 234 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~--~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~ 234 (261)
.++++++|+++|+++|||||||+|.+ +++++ ++..++.+||||+++|+.+++|++|||||| ||+||+++|++
T Consensus 207 -~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~---~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP--rg~EI~~eV~d 280 (308)
T 1ml4_A 207 -MKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQ---EYLKVKGSYQVNLKVLEKAKDELRIMHPLP--RVDEIHPEVDN 280 (308)
T ss_dssp -CCEEEESCTHHHHTTCSEEEECCCCGGGSSSHH---HHHTTTTCCCBCTTGGGGSCTTCEEECCSC--CSSSBCGGGGG
T ss_pred -CeEEEEcCHHHHhcCCCEEEECCccccccCCHH---HHHHHhcCcccCHHHHhhcCCCCEEECCCC--CCCeecHHHhC
Confidence 57999999999999999999999965 44432 234556799999999999999999999999 79999999999
Q ss_pred CCCcchHhHHhccHHHHHHHHHHHhcC
Q 024871 235 APYSIVFPQAENRMHAQNAIMLHALGL 261 (261)
Q Consensus 235 ~~~s~~~~Qa~N~l~~r~All~~~l~~ 261 (261)
+|+|+||+||+||+|+|||||+++||.
T Consensus 281 ~p~s~if~QaeNrl~~r~AlL~~ll~~ 307 (308)
T 1ml4_A 281 TKHAIYFRQVFNGVPVRMALLALVLGV 307 (308)
T ss_dssp STTBCHHHHHHTHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHhcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999873
No 19
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=100.00 E-value=5.7e-90 Score=640.81 Aligned_cols=260 Identities=43% Similarity=0.670 Sum_probs=246.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEe
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN 80 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVIN 80 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+|+|+||+||+.++.++++|++++|||||
T Consensus 73 la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~la~~s~vPVIN 152 (358)
T 4h31_A 73 IALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWN 152 (358)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEE
T ss_pred EEEEeCCCChhhHHHHHHHHHHcCCeEEECCcccccccCccchhHHHHHhhccCceeEecccchhHHHHhhhhccCceEC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhC--CCCCcEEEEEcCC-CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH----
Q 024871 81 GLTDYNHPCQIMADALTIIEHVG--RLEGTKVVYVGDG-NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR---- 153 (261)
Q Consensus 81 a~~~~~HPtQ~L~Dl~Ti~e~~g--~l~~~~i~~vGd~-~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~---- 153 (261)
|+|+.+||||+|+|+|||+|++| .++|+||+||||+ +||+|||+.+++++|++|++++|++|.|++++++.++
T Consensus 153 G~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~ 232 (358)
T 4h31_A 153 GLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAK 232 (358)
T ss_dssp SCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHH
T ss_pred CCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHH
Confidence 99999999999999999999987 6999999999998 7899999999999999999999999999999987765
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHH-HHHHHhhhcCCcccHHHHHh-cCCCcEEeeCCCCC--------
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEE-AAYRKQAFQGFQVDEFLMKL-AGPKAYFMHCLPAE-------- 223 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~-~~~~~~~~~~y~v~~~~~~~-a~~~~~~mH~lP~~-------- 223 (261)
+.| +++++++|++||+++|||||||+|.+|+++++ .+++.+++.+||||.++|+. ++++++||||||++
T Consensus 233 ~~g-~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~LP~~~n~~~~~~ 311 (358)
T 4h31_A 233 QTG-GKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIG 311 (358)
T ss_dssp HHT-CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECSCCCCSSSSHHH
T ss_pred HcC-CcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCCCCCCCcccccc
Confidence 456 68999999999999999999999999987654 35677889999999999986 68999999999995
Q ss_pred ---------CCcccccccccCCCcchHhHHhccHHHHHHHHHHHhcC
Q 024871 224 ---------RGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALGL 261 (261)
Q Consensus 224 ---------rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~~ 261 (261)
||+||+++|+++|+|+||+||+||+|+|||||+++||.
T Consensus 312 ~~~~~~~~~RG~EIt~eV~d~~~S~if~QaeNrl~~r~AlL~~lLG~ 358 (358)
T 4h31_A 312 KQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVMVATLGS 358 (358)
T ss_dssp HHHHHHTTCSCSSBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhhccCCCceEECHHHhCCCccHHHHHHhhhHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999999984
No 20
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00 E-value=2.3e-89 Score=634.30 Aligned_cols=257 Identities=38% Similarity=0.644 Sum_probs=245.2
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCC------CcCC------CCCCCHHHHHHHHhhhccEEEEeeC------
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPD------DIQM------GKREETRDAARVLCRYNDIIMARVF------ 62 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~------~s~~------~kgEs~~Dt~~~ls~~~D~iv~R~~------ 62 (261)
+++||||||||||+|||.||++|||++++++++ +||+ +||||++||+||||+|+|+||+||+
T Consensus 61 la~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~~ss~~~s~~~~vm~~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~ 140 (359)
T 1zq6_A 61 IALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDW 140 (359)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHHHSCCEECSSSCCCCSSCCEEHHHHHHHHHHHCSEEEEECCCCSSCH
T ss_pred EEEEeCCCCcchhhhHHHHHHHcCCeEEEeCCCcccccccccccccccCCCCCcHHHHHHHHHHhCcEEEEecccccccc
Confidence 589999999999999999999999999999988 8889 9999999999999999999999999
Q ss_pred ----CcchHHHHhhhCCCcEEeCCCCCCChhHHHHHHHHHHHHhCC--CCCcE--EEEEcC----CCchHHHHHHHHhcC
Q 024871 63 ----GHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR--LEGTK--VVYVGD----GNNIVHSWLLMASVI 130 (261)
Q Consensus 63 ----~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g~--l~~~~--i~~vGd----~~~v~~S~~~~~~~~ 130 (261)
.++.++++|++++||||||+++. ||||+|+|+|||+|++|+ ++|+| |+|||| +|||+|||+.++++|
T Consensus 141 ~~~~~~~~~~~lA~~~~vPVINag~g~-HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~ 219 (359)
T 1zq6_A 141 SKDREDQVLKSFAKYSPVPVINMETIT-HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM 219 (359)
T ss_dssp HHHTTCHHHHHHHHHCSSCEEESSSSC-CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHhCCCCEEeCCCCC-CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc
Confidence 99999999999999999998877 999999999999999999 99999 999999 789999999999999
Q ss_pred CcEEEEeCCC-CCCCCHHHHHHHH----HhCCCeEEEEcCHHHHhCCCCEEEEecccC---cchhHHHHHHHhhhcCCcc
Q 024871 131 PFHFVCACPK-GFEPDKETVEKAR----KAGISKIEITNDPKEVVQGADVVYSDVWAS---MGQKEEAAYRKQAFQGFQV 202 (261)
Q Consensus 131 g~~~~~~~P~-~~~~~~~~~~~~~----~~g~~~i~~~~d~~~a~~~aDviy~~~w~~---~~~~~~~~~~~~~~~~y~v 202 (261)
|++|++++|+ +|.|+++++++++ +.| .++++++|++||+++|||||||+|.+ |||+++.+++.+++.+|||
T Consensus 220 G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g-~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~v 298 (359)
T 1zq6_A 220 GMDVTLLCPTPDYILDERYMDWAAQNVAESG-GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIV 298 (359)
T ss_dssp TCEEEEECSSGGGCCCHHHHHHHHHHHHHHS-CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSB
T ss_pred CCEEEEEcCccccCCCHHHHHHHHHHHHHcC-CeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHHHHHhcCCCC
Confidence 9999999999 9999998887766 566 58999999999999999999999998 9987666778889999999
Q ss_pred cHHHHHhcCCCcEEeeCCCCCCCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 203 DEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 203 ~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|.++|+.++ |++||||||++||+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 299 t~e~l~~a~-~ai~MHcLP~~Rg~EI~~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~ 355 (359)
T 1zq6_A 299 DERKMALTN-NGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALVG 355 (359)
T ss_dssp CHHHHHTSS-SCEEECCSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHhCC-CCEEECCCCCCCCceeCHHHhCCCcchHHHHHhcCHHHHHHHHHHHhc
Confidence 999999999 999999999999999999999999999999999999999999999987
No 21
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=100.00 E-value=4e-89 Score=622.74 Aligned_cols=252 Identities=27% Similarity=0.398 Sum_probs=237.7
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCC-CCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEE
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVI 79 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~-~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVI 79 (261)
+++||||||||||+|||.||++|||+++++++ ++||++||||++||+||||+|+|+||+||+.++.++++|++++||||
T Consensus 43 la~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVI 122 (306)
T 4ekn_B 43 LATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPII 122 (306)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEE
T ss_pred EEEEEcCCChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999987 89999999999999999999999999999999999999999999999
Q ss_pred eCC-CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHh
Q 024871 80 NGL-TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKA 155 (261)
Q Consensus 80 Na~-~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~ 155 (261)
||+ |+++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++ |++|++++|++|+|++++++.+++.
T Consensus 123 Nag~g~~~HPtQ~LaDl~Ti~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 202 (306)
T 4ekn_B 123 NAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAK 202 (306)
T ss_dssp ESCSSSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHT
T ss_pred eCCCCCCcCcHHHHHHHHHHHHHhCCcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHc
Confidence 995 6999999999999999999999999999999998 68999999999999 9999999999999999999999988
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEeccc--CcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccc
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWA--SMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVI 233 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~--~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~ 233 (261)
| .++++++|+++|+++||||||++|. +++++++ +.+.+.+||||.++|+. +|++|||||| ||+||+++|+
T Consensus 203 g-~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e---~~~~~~~y~v~~~~l~~--~~ai~mH~lP--Rg~EI~~eV~ 274 (306)
T 4ekn_B 203 N-IKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNE---YEKVKGSYKIKREYVEG--KKFIIMHPLP--RVDEIDYDVD 274 (306)
T ss_dssp T-CCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHH---HHHHHHHHCBCHHHHTT--CCCEEECCSC--CSSSBCGGGT
T ss_pred C-CEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHH---HHHhccCcEECHHHHcC--CCCEEECCCC--CCCeecHhHh
Confidence 8 5789999999999999999999995 4554332 34556789999999987 8999999999 8999999999
Q ss_pred cCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 234 EAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 234 ~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
++|+|+||+||+||+|+|||||+++||
T Consensus 275 d~p~s~vf~QaeNrl~~r~AlL~~ll~ 301 (306)
T 4ekn_B 275 DLPQAKYFKQSFYGIPVRMAILKKLIE 301 (306)
T ss_dssp TSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHhcCHHHHHHHHHHHhc
Confidence 999999999999999999999999986
No 22
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=100.00 E-value=3.3e-89 Score=621.46 Aligned_cols=252 Identities=25% Similarity=0.315 Sum_probs=230.2
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCC-cCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEE
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDD-IQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVI 79 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~-s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVI 79 (261)
++++|||||||||+|||.||++|||+++++++.+ |+++||||++||+||||+|+|+||+||+.++.++++|+++++|||
T Consensus 41 ~~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVI 120 (299)
T 1pg5_A 41 ISIAFFEPSTRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNYSDGIVMRHKYDGASRFASEISDIPVI 120 (299)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHHCSEEEEEESSBTHHHHHHHHCSSCEE
T ss_pred EEEEecCCCcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999998766 789999999999999999999999999999999999999999999
Q ss_pred eC-CCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHh
Q 024871 80 NG-LTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKA 155 (261)
Q Consensus 80 Na-~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~ 155 (261)
|| +|+++||||+|+|+|||+|++|+++|+||+||||+ +||+||++.+++++ |++|++++|++|+|++++ +++.
T Consensus 121 NaG~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~---~~~~ 197 (299)
T 1pg5_A 121 NAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI---LDEL 197 (299)
T ss_dssp EEEETTTBCHHHHHHHHHHHHHHHSCSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH---HTTC
T ss_pred eCCCCCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH---HHHc
Confidence 98 89999999999999999999999999999999998 68999999999999 999999999999999876 4466
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccC--cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccc
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWAS--MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVI 233 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~--~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~ 233 (261)
| .++++++|++||+++|||||||+|.+ ++++++ +..++.+||||+++|+.+++|++|||||| ||+||+++|+
T Consensus 198 g-~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~---~~~~~~~y~v~~~~l~~a~~~ai~mH~lP--rg~EI~~eV~ 271 (299)
T 1pg5_A 198 N-YPVKEVENPFEVINEVDVLYVTRIQKERFVDEME---YEKIKGSYIVSLDLANKMKKDSIILHPLP--RVNEIDRKVD 271 (299)
T ss_dssp C-SCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHH---HHHHGGGGSBCHHHHHTSCTTCEEECCSC--CSSSBCGGGG
T ss_pred C-CeEEEeCCHHHHhcCCCEEEeCCcccccccCHHH---HHHhhcCcccCHHHHHhcCCCCEEECCCC--CCCccCHHHh
Confidence 6 57999999999999999999999976 554332 23456789999999999999999999999 7999999999
Q ss_pred cCCCcchHhHHhccHHHHHHHHHHHhcC
Q 024871 234 EAPYSIVFPQAENRMHAQNAIMLHALGL 261 (261)
Q Consensus 234 ~~~~s~~~~Qa~N~l~~r~All~~~l~~ 261 (261)
++|+|+||+||+||+|+|||||+++||.
T Consensus 272 d~p~s~vf~QaeNrl~~r~AlL~~ll~~ 299 (299)
T 1pg5_A 272 KTTKAKYFEQASYGVPVRMSILTKIYGE 299 (299)
T ss_dssp GSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCcccHHHHHHHhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999973
No 23
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00 E-value=3.6e-89 Score=623.68 Aligned_cols=253 Identities=26% Similarity=0.323 Sum_probs=228.2
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCc--CCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhC-CCc
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDI--QMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFA-TVP 77 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s--~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~-~vP 77 (261)
++++|||||||||+|||.||++|||+++++++.++ |++||||++||+|+||+|+|+||+||+.++.++++|+++ ++|
T Consensus 44 la~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~~vP 123 (310)
T 3csu_A 44 IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVP 123 (310)
T ss_dssp EEEEESSCCHHHHHHHHHHHHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCC
T ss_pred EEEEecCCCccHHHHHHHHHHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHhCCEEEEECCChhHHHHHHHhcCCCC
Confidence 58999999999999999999999999999988765 899999999999999999999999999999999999999 999
Q ss_pred EEeCC-CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHH
Q 024871 78 VINGL-TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKAR 153 (261)
Q Consensus 78 VINa~-~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~ 153 (261)
||||+ |+++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++ |+++++++|++|.|+++++++++
T Consensus 124 VINag~G~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~ 203 (310)
T 3csu_A 124 VLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLD 203 (310)
T ss_dssp EEEEEETTSCCHHHHHHHHHHHHHHHSCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHH
T ss_pred EEcCccCCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH
Confidence 99986 5999999999999999999999999999999998 68999999999999 99999999999999999999999
Q ss_pred HhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHH--HHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccc
Q 024871 154 KAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEA--AYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEG 231 (261)
Q Consensus 154 ~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~--~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~ 231 (261)
+.| .++++++|++||+++|||||||+| |++|. +++.+++.+||||.++|+.+++|++|||||| ||+||+++
T Consensus 204 ~~g-~~~~~~~d~~eav~~aDvvyt~~~----q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP--rg~EI~~e 276 (310)
T 3csu_A 204 EKG-IAWSLHSSIEEVMAEVDILYMTRV----QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATD 276 (310)
T ss_dssp HTT-CCEEECSCGGGTTTTCSEEEECC---------------------CCBCGGGGTTCCTTCEEECCSC--CSSSBCHH
T ss_pred HcC-CeEEEEcCHHHHhcCCCEEEECCc----cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCC--CCCeecHH
Confidence 888 579999999999999999999999 33321 2233455689999999999999999999999 69999999
Q ss_pred cccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 232 VIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 232 v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+++|+|+||+||+||+|+|||||.++||
T Consensus 277 V~d~p~s~vf~QaeNrl~~r~AlL~~ll~ 305 (310)
T 3csu_A 277 VDKTPHAWYFQQAGNGIFARQALLALVLN 305 (310)
T ss_dssp HHTSTTBCHHHHHHTHHHHHHHHHHHHHS
T ss_pred HhCCCccHHHHHHHhCHHHHHHHHHHHhc
Confidence 99999999999999999999999999986
No 24
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=100.00 E-value=2.2e-88 Score=616.64 Aligned_cols=248 Identities=23% Similarity=0.293 Sum_probs=227.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHHHhhhCCCcEE
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILDLAKFATVPVI 79 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~~a~~~~vPVI 79 (261)
++++|||||||||+|||.||++|||+++++++++||++||||++||+|+||+| +|+||+||+.++.++++|++++||||
T Consensus 39 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~~D~iviR~~~~~~~~~la~~~~vPVI 118 (304)
T 3r7f_A 39 AANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPIL 118 (304)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHCSSCEE
T ss_pred EEEEecCCChhHHHhHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHHHHHhcCCEEEEecCChhHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred eCC-CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 80 NGL-TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 80 Na~-~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
||+ |+++||||+|+|+|||+|++|+++|+||+||||+ +||+|||+.+++++|++|++++|++|.|+. .+.|
T Consensus 119 Nagdg~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~------~~~g 192 (304)
T 3r7f_A 119 NAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE------NTFG 192 (304)
T ss_dssp ESCCTTSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT------CSSC
T ss_pred eCCCCCCcCcHHHHHHHHHHHHHhCCCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch------hhcC
Confidence 996 7999999999999999999999999999999998 579999999999999999999999999832 1222
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAP 236 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~ 236 (261)
.++|++||+++|||||||+|....+++.. .+.+++.+||||.++|+.+++|++||||||++||+||+++|+++|
T Consensus 193 -----~~~d~~eav~~aDvvyt~~~q~er~~~~~-~~~~~~~~y~v~~~~l~~a~~~ai~mHclP~~Rg~EI~~eV~d~p 266 (304)
T 3r7f_A 193 -----TYVSMDEAVESSDVVMLLRIQNERHQSAV-SQEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESE 266 (304)
T ss_dssp -----EECCHHHHHHHCSEEEECCCCTTTCCSSC-CSTTHHHHHSBCHHHHTTSCTTCEEECCSCCCBTTTBCGGGTTST
T ss_pred -----ccCCHHHHhCCCCEEEeccchhhccccch-hHHHHhCCCccCHHHHhhcCCCCEEECCCCCCCCceeCHHHhCCC
Confidence 46899999999999999998542211100 234567889999999999999999999999999999999999999
Q ss_pred CcchHhHHhccHHHHHHHHHHHhc
Q 024871 237 YSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 237 ~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
+|+||+||+||+|+|||||+++|+
T Consensus 267 ~S~vf~QaeNrl~~r~AlL~~ll~ 290 (304)
T 3r7f_A 267 KSRIFKQMKNGVFIRMAVIQRALQ 290 (304)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHhccHHHHHHHHHHHhc
Confidence 999999999999999999999986
No 25
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2.8e-88 Score=612.66 Aligned_cols=246 Identities=23% Similarity=0.289 Sum_probs=230.1
Q ss_pred eeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHH-HhhhCCCcEEe
Q 024871 3 MIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILD-LAKFATVPVIN 80 (261)
Q Consensus 3 ~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~-~a~~~~vPVIN 80 (261)
++|||||||||+|||.|+++|||+++++++++||++||||++||+|+||+| +|+||+||+.++.+++ +|+++++||||
T Consensus 39 ~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~~D~iviR~~~~~~~~~~la~~~~vPVIN 118 (291)
T 3d6n_B 39 LFFSEPSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVN 118 (291)
T ss_dssp EEESSCCHHHHHHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSEEEE
T ss_pred EEecCCCccHHHHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHhCCCCEEe
Confidence 899999999999999999999999999999999999999999999999999 5999999999999999 99999999999
Q ss_pred -CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcC--CCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 81 -GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 81 -a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd--~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
|+|+++||||+|+|+|||+|++|+++|+||+|||| .+||+|||+.+++++|+++++++|++|.|++ + + +.|
T Consensus 119 AG~g~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~-~-~---~~g- 192 (291)
T 3d6n_B 119 AGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD-V-E---VFK- 192 (291)
T ss_dssp EEETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-G-G---GGC-
T ss_pred CccCCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch-H-H---HCC-
Confidence 68999999999999999999999999999999999 6899999999999999999999999999876 2 2 344
Q ss_pred CeEEEEcCHHHHhCCCCEEEEecccCcchh--HHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccccccccC
Q 024871 158 SKIEITNDPKEVVQGADVVYSDVWASMGQK--EEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEA 235 (261)
Q Consensus 158 ~~i~~~~d~~~a~~~aDviy~~~w~~~~~~--~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~ 235 (261)
+++++|++||+++|||||| .|.+|++. ....++.+++.+||||+++|+.++ +||||||+|||+||+++|+++
T Consensus 193 --~~~~~d~~eav~~aDvvy~-~~~q~er~~~~~~~~~~~~~~~y~v~~~~l~~a~---i~mH~lP~~Rg~EI~~eV~d~ 266 (291)
T 3d6n_B 193 --VDVFDDVDKGIDWADVVIW-LRLQKERQKENYIPSESSYFKQFGLTKERFEKVK---LYMHPGPVNRNVDIDHELVYT 266 (291)
T ss_dssp --EEEESSHHHHHHHCSEEEE-CCCCTHHHHTTSSSCHHHHHHHHSBCHHHHTTCC---CEECSSCCCBTTTBCGGGSSS
T ss_pred --CEEEcCHHHHhCCCCEEEE-eCcccCccccccchhHHHHHhhcCcCHHHHHhcc---cccCCCCCCCCceECHHHhCC
Confidence 7889999999999999999 99888762 222345678889999999999886 999999999999999999999
Q ss_pred CCcchHhHHhccHHHHHHHHHHHhc
Q 024871 236 PYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 236 ~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+|+||+||+||+|+|||||+++||
T Consensus 267 p~s~if~QaeN~l~~r~AlL~~~l~ 291 (291)
T 3d6n_B 267 EKSLIQEQVKNGIPVRKAIYKFLWT 291 (291)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHhhHHHHHHHHHHHhC
Confidence 9999999999999999999999986
No 26
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=100.00 E-value=2.3e-87 Score=613.87 Aligned_cols=246 Identities=30% Similarity=0.443 Sum_probs=232.7
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCC------------CCCCHHHHHHHHhhhccEEEEeeC------
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMG------------KREETRDAARVLCRYNDIIMARVF------ 62 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~------------kgEs~~Dt~~~ls~~~D~iv~R~~------ 62 (261)
++++|||||||||+|||.|+++|||++++++++++|++ ||||++||+||||+|+|+||+||+
T Consensus 39 l~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~m~~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~ 118 (324)
T 1js1_X 39 LLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENR 118 (324)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEEECCGGGCCEECCSSCCCCSSCCEEHHHHHHHHHHTCSEEEEECCCCSSCH
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCEEEEECCCCCceeeccccccccccCCCCCHHHHHHHHHHhCcEEEEecccccccc
Confidence 58999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ----CcchHHHHhhhCCCcEEeCCCCCCChhHHHHHHHHHHHHhC--CCCCcEEEE-----EcCCCchHHHHHHHHhcCC
Q 024871 63 ----GHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVG--RLEGTKVVY-----VGDGNNIVHSWLLMASVIP 131 (261)
Q Consensus 63 ----~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g--~l~~~~i~~-----vGd~~~v~~S~~~~~~~~g 131 (261)
.++.++++|++++||||||+++.+||||+|+|+|||+|++| +++ +||+| ||| +||+||++.+++++|
T Consensus 119 ~~~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~~~l~-l~ia~a~~~~vGD-~rva~Sl~~~~~~~G 196 (324)
T 1js1_X 119 EYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPK-VVMTWAPHPRPLP-QAVPNSFAEWMNATD 196 (324)
T ss_dssp HHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHHHHHHHCSSSSCE-EEEECCCCSSCCC-SHHHHHHHHHHHTSS
T ss_pred cccccchHHHHHHhhCCCCEEECCCCCCCcHHHHHHHHHHHHHcCCCCee-EEEEEEcccccCC-cchHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999 899 99999 999 999999999999999
Q ss_pred cEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhH--HHHHHHhhhcCCcccHHHHHh
Q 024871 132 FHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKE--EAAYRKQAFQGFQVDEFLMKL 209 (261)
Q Consensus 132 ~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~--~~~~~~~~~~~y~v~~~~~~~ 209 (261)
++|++++|++|.|+++++ + .+++++|+++|+++|||||+|+|.+|+|++ +...+ ..+||||.++|+.
T Consensus 197 ~~v~~~~P~~~~~~~~~~------~--~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r---~~~y~vt~e~l~~ 265 (324)
T 1js1_X 197 YEFVITHPEGYELDPKFV------G--NARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILST---DRNWTVGDRQMAV 265 (324)
T ss_dssp SEEEEECCTTCCCCHHHH------T--TCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCC---CTTSSBCHHHHTT
T ss_pred CEEEEeCCcccCCChhhc------c--ceEEECCHHHHhCCCCEEEecCcccCCCccccchHHH---hcCcccCHHHHHh
Confidence 999999999999998764 3 578899999999999999999999999754 21112 3789999999999
Q ss_pred cCCCcEEeeCCCCCCCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 210 AGPKAYFMHCLPAERGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 210 a~~~~~~mH~lP~~rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
++ |++||||||++||+||+++|+++|+|+||+||+||+|+|||||.++|+
T Consensus 266 a~-~ai~MHcLP~~Rg~EI~~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~ 315 (324)
T 1js1_X 266 TN-NAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLE 315 (324)
T ss_dssp SS-SCEEECCSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CcEEECCCCCCCCcccCHHHhCCCcchHHHHHhhCHHHHHHHHHHHHh
Confidence 99 999999999999999999999999999999999999999999999985
No 27
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=100.00 E-value=1.7e-86 Score=623.44 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=220.4
Q ss_pred EeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeC-----CcchHHHHhhh---
Q 024871 2 SMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVF-----GHQDILDLAKF--- 73 (261)
Q Consensus 2 ~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~-----~~~~~~~~a~~--- 73 (261)
++||||||||||+|||.||++|||+++++++++||++||||++||+||||+|+|+||+||+ .+..+++++++
T Consensus 67 ~~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ssl~kGEsl~DTarvLs~y~D~IviRh~~~~g~~~~~~~~la~~~~~ 146 (399)
T 3q98_A 67 ISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDD 146 (399)
T ss_dssp EEEEEC-----CCHHHHHHHHHTCEEEECC-------CCTTHHHHHHHTCTTEEEEEEEECCCCCC---HHHHHHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHHcCCeEEEeCCccccCCCCCCHHHHHHHHHhhCcEEEEeccccCCcchHHHHHHHHHhhh
Confidence 6899999999999999999999999999999999999999999999999999999999996 36677888876
Q ss_pred --------CCCcEEeCCCCCCChhHHHHHHHHHHHHhCC---CCCcEEEEEcC-------CCchHHHHHHHHhcCCcEEE
Q 024871 74 --------ATVPVINGLTDYNHPCQIMADALTIIEHVGR---LEGTKVVYVGD-------GNNIVHSWLLMASVIPFHFV 135 (261)
Q Consensus 74 --------~~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g~---l~~~~i~~vGd-------~~~v~~S~~~~~~~~g~~~~ 135 (261)
+.+|||||+|+++||||+|+|+|||+|++|+ ++|+||+|||| .+||+|||+.+++++|++|+
T Consensus 147 ~~~~~v~~~~~PVINal~d~~HPtQaLaDl~TI~E~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~ 226 (399)
T 3q98_A 147 GYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVT 226 (399)
T ss_dssp HHHTTSCSSCCEEEEEECSSCCHHHHHHHHHHHHHHHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEE
T ss_pred hcccccccCCCcEEeCCCCCcCcHHHHHHHHHHHHHhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEE
Confidence 2468999999999999999999999999997 68999999965 35899999999999999999
Q ss_pred EeCCCCCCCCHHHHHHHH----HhCCCeEEEEcCHHHHhCCCCEEEEecccCcch-hHHH------------------HH
Q 024871 136 CACPKGFEPDKETVEKAR----KAGISKIEITNDPKEVVQGADVVYSDVWASMGQ-KEEA------------------AY 192 (261)
Q Consensus 136 ~~~P~~~~~~~~~~~~~~----~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~-~~~~------------------~~ 192 (261)
+++|++|.|++++++.++ +.| ..+++++|+++|+++|||||||+|.||++ .|+. .+
T Consensus 227 ~~~P~~~~~~~~~~~~a~~~a~~~G-~~i~~~~d~~eav~~aDvVytd~W~Smg~~~er~~~~~~~~~~~~~~~e~~~~~ 305 (399)
T 3q98_A 227 LAHPEGYDLIPDVVEVAKNNAKASG-GSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLA 305 (399)
T ss_dssp EECCTTCCCCHHHHHHHHHHHHHHT-CEEEEESCHHHHHTTCSEEEECCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EECCcccCCCHHHHHHHHHHHHHcC-CEEEEEcCHHHHhCCCCEEEecCccccchhhhhhhhccccchhhhhhhhhhhhH
Confidence 999999999999887654 456 58999999999999999999999999985 3321 12
Q ss_pred HHhhhcCCcccHHHHHhcC-CCcEEeeCCCCC------CCcccccccccCCCcchHhHHhccHHHHHHHHHHHh
Q 024871 193 RKQAFQGFQVDEFLMKLAG-PKAYFMHCLPAE------RGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHAL 259 (261)
Q Consensus 193 ~~~~~~~y~v~~~~~~~a~-~~~~~mH~lP~~------rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l 259 (261)
+.+++.+||||.++|+.++ +|++||||||++ ||+||+++|+++|+|++|+||+||+|+|||||.+++
T Consensus 306 r~~~~~~yqVn~elm~~a~~~daifMHcLPa~~~~~~~rg~EVt~eV~d~p~S~vf~QAeNrl~vrmAll~~~~ 379 (399)
T 3q98_A 306 QNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRK 379 (399)
T ss_dssp HHHTTTTCCBCHHHHHTSGGGCCEECCCSSCCEETTTBSSCSEEHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHccCcEECHHHHhhcCCCCcEEECCCCCCCcccCCCCCEeChhhhCCccccHHHHHhccHHHHHHHHHHhh
Confidence 4568899999999999987 599999999998 799999999999999999999999999999999875
No 28
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=4.3e-85 Score=616.18 Aligned_cols=257 Identities=28% Similarity=0.397 Sum_probs=223.6
Q ss_pred EeeccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeC-----CcchHHHHhhhC--
Q 024871 2 SMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVF-----GHQDILDLAKFA-- 74 (261)
Q Consensus 2 ~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~-----~~~~~~~~a~~~-- 74 (261)
++||||||||||+|||+||++|||+++++++++||++||||++||+||||+|+|+||+||+ .+..++++|+++
T Consensus 64 ~~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kGEsl~DTarvLs~y~D~IviRh~~~~g~~~~~~~~lA~~~~~ 143 (418)
T 2yfk_A 64 ISLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQISHGETVRETANMISFMADIIGIRDDMYIGKGNAYMHEVSESVQE 143 (418)
T ss_dssp EEEEC---CHHHHHHHHHHHHHTCEEEEECC--------CHHHHHHHHTTTTEEEEEEEECSSTTHHHHHHHHHHHHHHH
T ss_pred EEEecCCCccHHHHHHHHHHHCCCeEEecCCCcccCCCCcCHHHHHHHHHHhCcEEEEecccccCcchHHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999999999999999999999998 466788898875
Q ss_pred ---------CCcEEeCCCCCCChhHHHHHHHHHHHHhCC---CCCcEEEEEc-------CCCchHHHHHHHHhcCCcEEE
Q 024871 75 ---------TVPVINGLTDYNHPCQIMADALTIIEHVGR---LEGTKVVYVG-------DGNNIVHSWLLMASVIPFHFV 135 (261)
Q Consensus 75 ---------~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g~---l~~~~i~~vG-------d~~~v~~S~~~~~~~~g~~~~ 135 (261)
.+|||||+|+++||||+|+|+|||+|++|+ |+|+||+||| |++||+||++.+++++|++|+
T Consensus 144 ~~~~~~~~~~~PVINa~~~~~HPtQaLaDl~TI~E~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~ 223 (418)
T 2yfk_A 144 GYKDGVLEQRPTLVNLQCDIDHPTQAMADALHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVV 223 (418)
T ss_dssp HHHTTSCSSCCEEEEEEESSCCHHHHHHHHHHHHHHTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEE
T ss_pred hhcccccCCCCeEEeCCCCccChHHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEE
Confidence 467999999999999999999999999998 7899999995 456899999999999999999
Q ss_pred EeCCCCCCCCHHHHHHHH----HhCCCeEEEEcCHHHHhCCCCEEEEecccCcch-hHHH------------------HH
Q 024871 136 CACPKGFEPDKETVEKAR----KAGISKIEITNDPKEVVQGADVVYSDVWASMGQ-KEEA------------------AY 192 (261)
Q Consensus 136 ~~~P~~~~~~~~~~~~~~----~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~-~~~~------------------~~ 192 (261)
+++|++|.|++++++.++ +.| +++++++|+++|+++|||||||+|.||++ .||. .+
T Consensus 224 l~~P~~~~~~p~~~~~a~~~a~~~G-~~v~~~~d~~eav~~ADVVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~ 302 (418)
T 2yfk_A 224 LAHPEGYEIMPEVEEVAKKNAAEFG-GNFTKTNSMAEAFKDADVVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLS 302 (418)
T ss_dssp EECCTTCCCCHHHHHHHHHHHHHHS-SEEEEESCHHHHHTTCSEEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EECCccccCCHHHHHHHHHHHHHcC-CEEEEEcCHHHHhcCCCEEEEccccchhHHHHHhhhhccccchhhhhhhhhhhh
Confidence 999999999988887654 466 58999999999999999999999999964 3432 12
Q ss_pred HHhhhcCCcccHHHHHhcCC-CcEEeeCCCCCC------CcccccccccCCCcchHhHHhccHHHHHHHHHHHh
Q 024871 193 RKQAFQGFQVDEFLMKLAGP-KAYFMHCLPAER------GVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHAL 259 (261)
Q Consensus 193 ~~~~~~~y~v~~~~~~~a~~-~~~~mH~lP~~r------g~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l 259 (261)
+.+++.+||||+++|+.+++ |++||||||++| |+||+++|+++|+|+||+||+||+|+|||||.++.
T Consensus 303 ~~~~~~~y~vt~elm~~ak~~dai~MHcLPa~r~~~~~rg~EIt~eV~d~p~S~vf~QAeNrl~~r~AlL~~~~ 376 (418)
T 2yfk_A 303 QNKKHKDWECTEELMKTTKDGKALYMHCLPADITGVSCEEGEVEASVFDRYRVELYKEASYKPYVIAAMIFLSK 376 (418)
T ss_dssp HHGGGTTCCBCHHHHHTSGGGCCEECCCSCCCEETTTBSSCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCHHHHHhcCCCCeEEECCCCCCCccCCCCCCEEChHHhCCCcchHHhHHhcCHHHHHHHHHHhh
Confidence 35688999999999999976 999999999986 99999999999999999999999999999998764
No 29
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=100.00 E-value=2.2e-82 Score=590.86 Aligned_cols=257 Identities=37% Similarity=0.618 Sum_probs=230.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCeEEEeCCC------------CcCCCCCCCHHHHHHHHhhhccEEEEeeC------
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPD------------DIQMGKREETRDAARVLCRYNDIIMARVF------ 62 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~~~~l~~~------------~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~------ 62 (261)
+++||||||||||+|||.||++|||++++++++ .++.+||||++||+++||+|+|+||+|++
T Consensus 61 va~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~~~~~~~s~~~~~k~Es~~DTarvls~y~D~iviR~~~~~~~~ 140 (359)
T 3kzn_A 61 IALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDW 140 (359)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHHHSCCEECSSSCCCCSSCCEEHHHHHHHHHHHCSEEEEECCCCSSCH
T ss_pred EEEEecCCCccHHHHHHHHHHHcCCCEEecCCCCccccccccccccccCcccchHHHHHHHHhccCcEEEEEccccccch
Confidence 589999999999999999999999999999753 24557899999999999999999999965
Q ss_pred ----CcchHHHHhhhCCCcEEeCCCCCCChhHHHHHHHHHHHHhCC--CCCcEEEEEcC------CCchHHHHHHHHhcC
Q 024871 63 ----GHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR--LEGTKVVYVGD------GNNIVHSWLLMASVI 130 (261)
Q Consensus 63 ----~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g~--l~~~~i~~vGd------~~~v~~S~~~~~~~~ 130 (261)
.++.++++|++++|||||+ |+++||||+|+|+|||+|+||. ++|+|++++|| .+||+||++.+++++
T Consensus 141 ~~~~~~~~~~~~a~~~~vPVIN~-g~~~HPtQaL~Dl~Ti~e~~G~~dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~ 219 (359)
T 3kzn_A 141 SKDREDQVLKSFAKYSPVPVINM-ETITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM 219 (359)
T ss_dssp HHHTTCHHHHHHHHHCSSCEEES-SSSCCHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT
T ss_pred hcchhhHHHHHHHHhCCCcccCc-ccccCchHHHHHHHHHHHHcCCccccCCeEEEEEeecCCccccchhhhhHHHHHhc
Confidence 5678999999999999996 6789999999999999999996 88999999876 267999999999999
Q ss_pred CcEEEEeCCC-CCCCCHHHHHHHH----HhCCCeEEEEcCHHHHhCCCCEEEEecccCcch---hHHHHHHHhhhcCCcc
Q 024871 131 PFHFVCACPK-GFEPDKETVEKAR----KAGISKIEITNDPKEVVQGADVVYSDVWASMGQ---KEEAAYRKQAFQGFQV 202 (261)
Q Consensus 131 g~~~~~~~P~-~~~~~~~~~~~~~----~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~---~~~~~~~~~~~~~y~v 202 (261)
|+++++++|+ +|.|+++++++++ +.| .++++++|+++|+++|||||||+|.+|++ .+....+++++.+|++
T Consensus 220 g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g-~~i~~~~d~~eav~~aDvvyt~r~q~~r~~~~~~~~~~~~~~~~~y~v 298 (359)
T 3kzn_A 220 GMDVTLLCPTPDYILDERYMDWAAQNVAESG-GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIV 298 (359)
T ss_dssp TCEEEEECSSGGGCCCHHHHHHHHHHHHHHS-CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSB
T ss_pred cccEEEEecccccCCCHHHHHHHHHHHHhhC-CCcccccCHHHHhcCCeEEEEEEEEEeecccchhhhHHHHHHHhccCh
Confidence 9999999995 7899998887654 456 58999999999999999999999998853 2223345678899999
Q ss_pred cHHHHHhcCCCcEEeeCCCCCCCcccccccccCCCcchHhHHhccHHHHHHHHHHHhc
Q 024871 203 DEFLMKLAGPKAYFMHCLPAERGVEVTEGVIEAPYSIVFPQAENRMHAQNAIMLHALG 260 (261)
Q Consensus 203 ~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v~~~~~s~~~~Qa~N~l~~r~All~~~l~ 260 (261)
|+++|+.+ +|++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++||
T Consensus 299 ~~~l~~~~-~~ai~MHplP~~Rg~EI~~eV~d~p~S~if~QaeNgl~vrmAlL~~llG 355 (359)
T 3kzn_A 299 DERKMALT-NNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALVG 355 (359)
T ss_dssp CHHHHHTS-SSCEEECCSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCC-CCCEEECCCCCCCCCCcCHHHHCCCcchHHHHHHhhHHHHHHHHHHHhC
Confidence 99999865 5899999999999999999999999999999999999999999999998
No 30
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.54 E-value=9.1e-07 Score=83.70 Aligned_cols=132 Identities=11% Similarity=0.022 Sum_probs=97.6
Q ss_pred hCCCcEEeC-CCCCCC-------hhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCC
Q 024871 73 FATVPVING-LTDYNH-------PCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEP 144 (261)
Q Consensus 73 ~~~vPVINa-~~~~~H-------PtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~ 144 (261)
...+||||+ ++...| ..|.+.|.+ ++.....+.|++|+++| .+++..+.+..+..+|++++++.|.
T Consensus 170 ~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi-~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~---- 243 (436)
T 3h9u_A 170 KLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI-KRATDVMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVD---- 243 (436)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH-HHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC----
T ss_pred CCCCceEeechhhhhhhhhccccchHHHHHHH-HHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCC----
Confidence 478999997 454444 678998877 33333469999999999 5889999999999999999887663
Q ss_pred CHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC
Q 024871 145 DKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER 224 (261)
Q Consensus 145 ~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r 224 (261)
+.....+...|. + ..+++++++++|||++.. +. ..-|+.+.++..+++++|++..+ .
T Consensus 244 -p~~a~~A~~~G~---~-~~sL~eal~~ADVVilt~----gt------------~~iI~~e~l~~MK~gAIVINvgR--g 300 (436)
T 3h9u_A 244 -PINALQAAMEGY---Q-VLLVEDVVEEAHIFVTTT----GN------------DDIITSEHFPRMRDDAIVCNIGH--F 300 (436)
T ss_dssp -HHHHHHHHHTTC---E-ECCHHHHTTTCSEEEECS----SC------------SCSBCTTTGGGCCTTEEEEECSS--S
T ss_pred -hhhhHHHHHhCC---e-ecCHHHHHhhCCEEEECC----CC------------cCccCHHHHhhcCCCcEEEEeCC--C
Confidence 222233445552 2 348999999999999753 21 24478888999999999999875 3
Q ss_pred Ccccccccc
Q 024871 225 GVEVTEGVI 233 (261)
Q Consensus 225 g~Ev~~~v~ 233 (261)
+.||+.+.+
T Consensus 301 ~vEID~~~L 309 (436)
T 3h9u_A 301 DTEIQVAWL 309 (436)
T ss_dssp GGGBCHHHH
T ss_pred CCccCHHHH
Confidence 457776544
No 31
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.80 E-value=0.0001 Score=68.56 Aligned_cols=129 Identities=13% Similarity=0.120 Sum_probs=90.2
Q ss_pred HhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCH
Q 024871 70 LAKFATVPVINGLTDYNHPC--QIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDK 146 (261)
Q Consensus 70 ~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~ 146 (261)
.++..+|+|.|+-+...+++ .+++-++.+.+++| .+.|++|++|| .+++..+++..+..+|++++.+.|..
T Consensus 76 ~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~----- 149 (380)
T 2o4c_A 76 YFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVG-AGQVGGRLVEVLRGLGWKVLVCDPPR----- 149 (380)
T ss_dssp HHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECHHH-----
T ss_pred HHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCh-----
Confidence 34456899999866555565 78899999998888 59999999999 69999999999999999998876531
Q ss_pred HHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 147 ETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 147 ~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
. ....|. . ..++++.++++|+|..-. +.... . ++....-++++.++..+++++++.+.
T Consensus 150 ~----~~~~g~---~-~~~l~ell~~aDvV~l~~--Plt~~-g-----~~~T~~li~~~~l~~mk~gailIN~s 207 (380)
T 2o4c_A 150 Q----AREPDG---E-FVSLERLLAEADVISLHT--PLNRD-G-----EHPTRHLLDEPRLAALRPGTWLVNAS 207 (380)
T ss_dssp H----HHSTTS---C-CCCHHHHHHHCSEEEECC--CCCSS-S-----SSCCTTSBCHHHHHTSCTTEEEEECS
T ss_pred h----hhccCc---c-cCCHHHHHHhCCEEEEec--cCccc-c-----ccchhhhcCHHHHhhCCCCcEEEECC
Confidence 1 012231 1 358999999999999853 11111 0 01112335666777677777777653
No 32
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.64 E-value=0.00071 Score=64.84 Aligned_cols=129 Identities=15% Similarity=0.055 Sum_probs=91.0
Q ss_pred hCCCcEEeC-CCCC------CC-hhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCC
Q 024871 73 FATVPVING-LTDY------NH-PCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFE 143 (261)
Q Consensus 73 ~~~vPVINa-~~~~------~H-PtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~ 143 (261)
...+||||. ++.. .| ..|.+.|- +.+..+ .+.|++++++|-+ .+..+.+..+..+|++++++.+.
T Consensus 224 ~L~iPvinvnDs~tK~~fDn~yGt~~sl~dg--i~r~tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~--- 297 (488)
T 3ond_A 224 TLLFPAINVNDSVTKSKFDNLYGCRHSLPDG--LMRATDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEID--- 297 (488)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC---
T ss_pred CCCCceecccchhhhhHhhhhccccHHHHHH--HHHHcCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCC---
Confidence 468999997 4322 23 44778884 445555 4999999999975 99999999999999999887553
Q ss_pred CCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCC
Q 024871 144 PDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAE 223 (261)
Q Consensus 144 ~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~ 223 (261)
+.-.+.+...|. . ..+++++++.+|+++... +. ...++.+.++..+++++|......
T Consensus 298 --~~~a~~Aa~~g~---d-v~~lee~~~~aDvVi~at----G~------------~~vl~~e~l~~mk~gaiVvNaG~~- 354 (488)
T 3ond_A 298 --PICALQATMEGL---Q-VLTLEDVVSEADIFVTTT----GN------------KDIIMLDHMKKMKNNAIVCNIGHF- 354 (488)
T ss_dssp --HHHHHHHHHTTC---E-ECCGGGTTTTCSEEEECS----SC------------SCSBCHHHHTTSCTTEEEEESSST-
T ss_pred --HHHHHHHHHhCC---c-cCCHHHHHHhcCEEEeCC----CC------------hhhhhHHHHHhcCCCeEEEEcCCC-
Confidence 333334445552 2 357899999999998753 21 245777788888999999988753
Q ss_pred CCcccccc
Q 024871 224 RGVEVTEG 231 (261)
Q Consensus 224 rg~Ev~~~ 231 (261)
..|++.+
T Consensus 355 -~~Ei~~~ 361 (488)
T 3ond_A 355 -DNEIDML 361 (488)
T ss_dssp -TTTBTHH
T ss_pred -CcccchH
Confidence 2344433
No 33
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.60 E-value=0.00095 Score=61.36 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=69.9
Q ss_pred HHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHh--------------------C-CCCCcEEEEEcCCCchHHHHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPC--QIMADALTIIEHV--------------------G-RLEGTKVVYVGDGNNIVHSWLL 125 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~--------------------g-~l~~~~i~~vGd~~~v~~S~~~ 125 (261)
+.++..+|+|.|+-+....+. .+++=++.+.+++ + .+.|++|+++| .+++..+.+.
T Consensus 103 ~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG-~G~IG~~vA~ 181 (351)
T 3jtm_A 103 QAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVG-AGRIGKLLLQ 181 (351)
T ss_dssp HHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEEC-CSHHHHHHHH
T ss_pred HHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEE-eCHHHHHHHH
Confidence 445567899999755332222 2333344443221 2 48899999999 5889999999
Q ss_pred HHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 126 MASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 126 ~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+..||++++...+... +. +.+++.|. +..+++++.++++|+|..-.
T Consensus 182 ~l~~~G~~V~~~dr~~~--~~---~~~~~~g~---~~~~~l~ell~~aDvV~l~~ 228 (351)
T 3jtm_A 182 RLKPFGCNLLYHDRLQM--AP---ELEKETGA---KFVEDLNEMLPKCDVIVINM 228 (351)
T ss_dssp HHGGGCCEEEEECSSCC--CH---HHHHHHCC---EECSCHHHHGGGCSEEEECS
T ss_pred HHHHCCCEEEEeCCCcc--CH---HHHHhCCC---eEcCCHHHHHhcCCEEEECC
Confidence 99999999887766431 22 22344552 44578999999999999854
No 34
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.40 E-value=0.0017 Score=59.62 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWAS 183 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~ 183 (261)
.+.|++|++|| .+++..+++..+..||+++....|... +.+. ..| ++..+++++.++++|+|..-. +
T Consensus 170 ~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~--~~~~-----~~g---~~~~~~l~ell~~sDvV~l~~--P 236 (345)
T 4g2n_A 170 GLTGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRL--SHAL-----EEG---AIYHDTLDSLLGASDIFLIAA--P 236 (345)
T ss_dssp CCTTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCC--CHHH-----HTT---CEECSSHHHHHHTCSEEEECS--C
T ss_pred ccCCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCc--chhh-----hcC---CeEeCCHHHHHhhCCEEEEec--C
Confidence 37889999999 589999999999999999998877532 1111 113 244579999999999999864 1
Q ss_pred cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 184 MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
...+. ..-++.+.++..+++++|.-+
T Consensus 237 lt~~T----------~~li~~~~l~~mk~gailIN~ 262 (345)
T 4g2n_A 237 GRPEL----------KGFLDHDRIAKIPEGAVVINI 262 (345)
T ss_dssp CCGGG----------TTCBCHHHHHHSCTTEEEEEC
T ss_pred CCHHH----------HHHhCHHHHhhCCCCcEEEEC
Confidence 11111 122566666666666666655
No 35
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.33 E-value=0.0059 Score=57.92 Aligned_cols=131 Identities=14% Similarity=0.073 Sum_probs=90.8
Q ss_pred CCCcEEeC-CCC------CCChh-HHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCC
Q 024871 74 ATVPVING-LTD------YNHPC-QIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEP 144 (261)
Q Consensus 74 ~~vPVINa-~~~------~~HPt-Q~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~ 144 (261)
..+||||. ++- +.|.| |.+.|-+ .+..+ .+.|++++++|- +++....+..+..||++++++-+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI--~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~----- 278 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGI--RRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEV----- 278 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHH--HHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHH--HHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeC-----
Confidence 58999996 431 12444 6666643 34444 599999999995 67999999999999999887743
Q ss_pred CHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC
Q 024871 145 DKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER 224 (261)
Q Consensus 145 ~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r 224 (261)
++.....+...|. + ..+++++++++|||.+.. +. ..-|+.+.++..|+++++.-+.= -
T Consensus 279 dp~~a~~A~~~G~---~-vv~LeElL~~ADIVv~at----gt------------~~lI~~e~l~~MK~GAILINvGR--g 336 (464)
T 3n58_A 279 DPICALQAAMDGF---E-VVTLDDAASTADIVVTTT----GN------------KDVITIDHMRKMKDMCIVGNIGH--F 336 (464)
T ss_dssp SHHHHHHHHHTTC---E-ECCHHHHGGGCSEEEECC----SS------------SSSBCHHHHHHSCTTEEEEECSS--S
T ss_pred CcchhhHHHhcCc---e-eccHHHHHhhCCEEEECC----CC------------ccccCHHHHhcCCCCeEEEEcCC--C
Confidence 2222223334452 3 347999999999998753 21 24589999999999999988653 2
Q ss_pred Cccccccccc
Q 024871 225 GVEVTEGVIE 234 (261)
Q Consensus 225 g~Ev~~~v~~ 234 (261)
..||+.+-+.
T Consensus 337 dvEID~~aL~ 346 (464)
T 3n58_A 337 DNEIQVAALR 346 (464)
T ss_dssp TTTBTCGGGT
T ss_pred CcccCHHHHH
Confidence 3567766554
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.30 E-value=0.0031 Score=60.32 Aligned_cols=106 Identities=11% Similarity=0.005 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCH
Q 024871 88 PCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDP 166 (261)
Q Consensus 88 PtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~ 166 (261)
+.|.+.|- +.+..+ .+.|++|+++| .+++..+.+..+..+|+++++..|.. .....+...|. + ..++
T Consensus 239 ~~~~l~~g--w~r~~~~~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~-----~~~~~a~~~g~---~-~~~l 306 (479)
T 1v8b_A 239 CRHSLPDG--LMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDP-----ICAIQAVMEGF---N-VVTL 306 (479)
T ss_dssp HHHHHHHH--HHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH-----HHHHHHHTTTC---E-ECCH
T ss_pred HHHHHhhh--hhhccccccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCCh-----hhHHHHHHcCC---E-ecCH
Confidence 44555554 333345 59999999999 58899999999999999999887642 11112334442 3 3589
Q ss_pred HHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCC
Q 024871 167 KEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLP 221 (261)
Q Consensus 167 ~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP 221 (261)
+++++++|+|++-. . ...-|+.+.++..+++++++++..
T Consensus 307 ~ell~~aDiVi~~~----~------------t~~lI~~~~l~~MK~gailiNvgr 345 (479)
T 1v8b_A 307 DEIVDKGDFFITCT----G------------NVDVIKLEHLLKMKNNAVVGNIGH 345 (479)
T ss_dssp HHHTTTCSEEEECC----S------------SSSSBCHHHHTTCCTTCEEEECSS
T ss_pred HHHHhcCCEEEECC----C------------hhhhcCHHHHhhcCCCcEEEEeCC
Confidence 99999999999973 1 124478889998999999999876
No 37
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.18 E-value=0.0033 Score=59.05 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=67.4
Q ss_pred HHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHH-----------------h-C-CCCCcEEEEEcCCCchHHHHHHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPC--QIMADALTIIEH-----------------V-G-RLEGTKVVYVGDGNNIVHSWLLMA 127 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~-----------------~-g-~l~~~~i~~vGd~~~v~~S~~~~~ 127 (261)
+.++..+|+|.|+-+....+. .+++=++.+.++ + + .+.|++|+++| .+++..+++..+
T Consensus 97 ~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIG-lG~IG~~vA~~l 175 (416)
T 3k5p_A 97 KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVG-YGNIGSQVGNLA 175 (416)
T ss_dssp HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEEC-CSHHHHHHHHHH
T ss_pred HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEe-eCHHHHHHHHHH
Confidence 444566899999755333332 233334444322 1 1 37899999999 689999999999
Q ss_pred hcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 128 SVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 128 ~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||++++...|..-... + ......++++.++++|+|..-.
T Consensus 176 ~~~G~~V~~yd~~~~~~~----------~--~~~~~~sl~ell~~aDvV~lhv 216 (416)
T 3k5p_A 176 ESLGMTVRYYDTSDKLQY----------G--NVKPAASLDELLKTSDVVSLHV 216 (416)
T ss_dssp HHTTCEEEEECTTCCCCB----------T--TBEECSSHHHHHHHCSEEEECC
T ss_pred HHCCCEEEEECCcchhcc----------c--CcEecCCHHHHHhhCCEEEEeC
Confidence 999999998887532111 1 1244678999999999998753
No 38
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.15 E-value=0.0017 Score=60.39 Aligned_cols=129 Identities=16% Similarity=0.109 Sum_probs=82.0
Q ss_pred HHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCC
Q 024871 69 DLAKFATVPVINGLTDYNHPC--QIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPD 145 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~ 145 (261)
+.++..+|+|.|+-+-...+. -+++=++.+.++.| .+.|++|++|| .+++..+++..+..+|+++....|..
T Consensus 78 ~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~---- 152 (381)
T 3oet_A 78 AWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVG-VGNVGSRLQTRLEALGIRTLLCDPPR---- 152 (381)
T ss_dssp HHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECHHH----
T ss_pred HHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCh----
Confidence 444567899999755333332 34444666666666 59999999999 58999999999999999998886521
Q ss_pred HHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 146 KETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 146 ~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
+ ...+. ....+++++++++|+|..-. +...+- ++-...-++.+.++..++++++.-+
T Consensus 153 -~-----~~~~~---~~~~sl~ell~~aDiV~l~~--Plt~~g------~~~T~~li~~~~l~~mk~gailIN~ 209 (381)
T 3oet_A 153 -A-----ARGDE---GDFRTLDELVQEADVLTFHT--PLYKDG------PYKTLHLADETLIRRLKPGAILINA 209 (381)
T ss_dssp -H-----HTTCC---SCBCCHHHHHHHCSEEEECC--CCCCSS------TTCCTTSBCHHHHHHSCTTEEEEEC
T ss_pred -H-----HhccC---cccCCHHHHHhhCCEEEEcC--cCCccc------cccchhhcCHHHHhcCCCCcEEEEC
Confidence 0 01111 12468999999999998853 111110 0001122456666666666666554
No 39
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.12 E-value=0.004 Score=56.08 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=70.7
Q ss_pred HhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHh----------------C-CCCCcEEEEEcCCCchHHHHHHHHhcC
Q 024871 70 LAKFATVPVINGLTDYNHPC--QIMADALTIIEHV----------------G-RLEGTKVVYVGDGNNIVHSWLLMASVI 130 (261)
Q Consensus 70 ~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~----------------g-~l~~~~i~~vGd~~~v~~S~~~~~~~~ 130 (261)
.++..+|+|.|.-+....++ .+++=++.+.+++ + .+.|++|++|| .+++..+++..+..+
T Consensus 86 ~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG-~G~IG~~~A~~l~~~ 164 (313)
T 2ekl_A 86 EAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVG-FGRIGTKVGIIANAM 164 (313)
T ss_dssp HHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEES-CSHHHHHHHHHHHHT
T ss_pred HHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEe-eCHHHHHHHHHHHHC
Confidence 34556799999765444443 4455566665442 2 48899999999 589999999999999
Q ss_pred CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 131 PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 131 g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
|++++...|.. ... .+++.|. .. .++++.++++|+|..-.
T Consensus 165 G~~V~~~d~~~---~~~---~~~~~g~---~~-~~l~ell~~aDvVvl~~ 204 (313)
T 2ekl_A 165 GMKVLAYDILD---IRE---KAEKINA---KA-VSLEELLKNSDVISLHV 204 (313)
T ss_dssp TCEEEEECSSC---CHH---HHHHTTC---EE-CCHHHHHHHCSEEEECC
T ss_pred CCEEEEECCCc---chh---HHHhcCc---ee-cCHHHHHhhCCEEEEec
Confidence 99998887643 221 2445563 22 48999999999999853
No 40
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.09 E-value=0.0055 Score=56.23 Aligned_cols=95 Identities=14% Similarity=0.177 Sum_probs=65.1
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWAS 183 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~ 183 (261)
.+.|++|+++| .+++.++.+..+..||++++...|.. . .+.+.+.|. +..++++++++++|+|..-. +
T Consensus 157 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~---~---~~~~~~~g~---~~~~~l~ell~~aDiV~l~~--P 224 (352)
T 3gg9_A 157 VLKGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGREN---S---KERARADGF---AVAESKDALFEQSDVLSVHL--R 224 (352)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHH---H---HHHHHHTTC---EECSSHHHHHHHCSEEEECC--C
T ss_pred cCCCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCC---C---HHHHHhcCc---eEeCCHHHHHhhCCEEEEec--c
Confidence 37899999999 58999999999999999998877631 1 123445552 45679999999999998853 1
Q ss_pred cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 184 MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
...+. ..-++.+.++..+++++|..+.
T Consensus 225 lt~~t----------~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 225 LNDET----------RSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp CSTTT----------TTCBCHHHHTTSCTTCEEEECS
T ss_pred CcHHH----------HHhhCHHHHhhCCCCcEEEECC
Confidence 11111 1224566666666666665543
No 41
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.08 E-value=0.0058 Score=55.70 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=68.2
Q ss_pred hhhCCCcEEeCCCCCCCh--hHHHHHHHHHHHHh-------------------CCCCCcEEEEEcCCCchHHHHHHHHhc
Q 024871 71 AKFATVPVINGLTDYNHP--CQIMADALTIIEHV-------------------GRLEGTKVVYVGDGNNIVHSWLLMASV 129 (261)
Q Consensus 71 a~~~~vPVINa~~~~~HP--tQ~L~Dl~Ti~e~~-------------------g~l~~~~i~~vGd~~~v~~S~~~~~~~ 129 (261)
++..+|+|.|+-+-...+ -.+++=++.+.+++ ..+.|++|++|| .+++..+++..+..
T Consensus 108 ~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIG-lG~IG~~vA~~l~~ 186 (335)
T 2g76_A 108 ATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILG-LGRIGREVATRMQS 186 (335)
T ss_dssp HHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEEC-CSHHHHHHHHHHHT
T ss_pred HHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEe-ECHHHHHHHHHHHH
Confidence 344578999975433333 22344455554331 248899999999 58999999999999
Q ss_pred CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 130 IPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 130 ~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+|++++...|.. .++ .+.+.|. + ..+++++++++|+|..-.
T Consensus 187 ~G~~V~~~d~~~---~~~---~~~~~g~---~-~~~l~ell~~aDvV~l~~ 227 (335)
T 2g76_A 187 FGMKTIGYDPII---SPE---VSASFGV---Q-QLPLEEIWPLCDFITVHT 227 (335)
T ss_dssp TTCEEEEECSSS---CHH---HHHHTTC---E-ECCHHHHGGGCSEEEECC
T ss_pred CCCEEEEECCCc---chh---hhhhcCc---e-eCCHHHHHhcCCEEEEec
Confidence 999998887642 221 3445663 2 248999999999999853
No 42
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.02 E-value=0.0072 Score=54.90 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=67.9
Q ss_pred HHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHh--------------------C-CCCCcEEEEEcCCCchHHHHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPC--QIMADALTIIEHV--------------------G-RLEGTKVVYVGDGNNIVHSWLL 125 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~--------------------g-~l~~~~i~~vGd~~~v~~S~~~ 125 (261)
+.++..+|+|.|+-+-...+. .+|+=++.+.++. | .+.|++|+++| .+++.++++.
T Consensus 84 ~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG-~G~IG~~vA~ 162 (330)
T 4e5n_A 84 DACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLG-MGAIGLAMAD 162 (330)
T ss_dssp HHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEEC-CSHHHHHHHH
T ss_pred HHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEe-eCHHHHHHHH
Confidence 344556899999755332222 2333344333210 1 37899999999 5899999999
Q ss_pred HHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 126 MASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 126 ~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+..||++++...|..- .. +.+.+.| +. ..+++++++++|+|..-.
T Consensus 163 ~l~~~G~~V~~~d~~~~--~~---~~~~~~g---~~-~~~l~ell~~aDvV~l~~ 208 (330)
T 4e5n_A 163 RLQGWGATLQYHEAKAL--DT---QTEQRLG---LR-QVACSELFASSDFILLAL 208 (330)
T ss_dssp HTTTSCCEEEEECSSCC--CH---HHHHHHT---EE-ECCHHHHHHHCSEEEECC
T ss_pred HHHHCCCEEEEECCCCC--cH---hHHHhcC---ce-eCCHHHHHhhCCEEEEcC
Confidence 99999999988877531 22 2233455 23 348999999999998864
No 43
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=97.00 E-value=0.0037 Score=56.51 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=62.6
Q ss_pred hhCCCcEEeCCCCCCChhHHHHH-----HHHHHHH---------hC--------CCCCcEEEEEcCCCchHHHHHHHHhc
Q 024871 72 KFATVPVINGLTDYNHPCQIMAD-----ALTIIEH---------VG--------RLEGTKVVYVGDGNNIVHSWLLMASV 129 (261)
Q Consensus 72 ~~~~vPVINa~~~~~HPtQ~L~D-----l~Ti~e~---------~g--------~l~~~~i~~vGd~~~v~~S~~~~~~~ 129 (261)
...++||.|.-+... +++.++ ++.+.++ .| .+.|++|+++| .+++..+++..+..
T Consensus 84 ~~~gi~v~~~~~~~~--~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG-~G~IG~~vA~~l~~ 160 (315)
T 3pp8_A 84 LDASIPLFRLEDTGM--GLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMG-AGVLGAKVAESLQA 160 (315)
T ss_dssp SCTTSCEEEC--CCC--HHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEEC-CSHHHHHHHHHHHT
T ss_pred hcCCCEEEEcCCCCc--cHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEe-eCHHHHHHHHHHHH
Confidence 345899999643322 455665 3333221 12 37899999999 48999999999999
Q ss_pred CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 130 IPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 130 ~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
||++++...+..-... +.....-..+++++++++|+|..-.
T Consensus 161 ~G~~V~~~dr~~~~~~----------~~~~~~~~~~l~ell~~aDiV~l~~ 201 (315)
T 3pp8_A 161 WGFPLRCWSRSRKSWP----------GVESYVGREELRAFLNQTRVLINLL 201 (315)
T ss_dssp TTCCEEEEESSCCCCT----------TCEEEESHHHHHHHHHTCSEEEECC
T ss_pred CCCEEEEEcCCchhhh----------hhhhhcccCCHHHHHhhCCEEEEec
Confidence 9999988765432211 1111111257899999999998853
No 44
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.97 E-value=0.011 Score=53.99 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=78.2
Q ss_pred HHhhhCCCcEEeCCCCCCChhHHHHH-----HHHHHHH------------------h--C-CCCCcEEEEEcCCCchHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPCQIMAD-----ALTIIEH------------------V--G-RLEGTKVVYVGDGNNIVHS 122 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPtQ~L~D-----l~Ti~e~------------------~--g-~l~~~~i~~vGd~~~v~~S 122 (261)
+.++..+|+|.|+-+-. +++.+| ++.+.++ + | .+.|+||++|| .+++..+
T Consensus 110 ~~a~~~gI~V~n~pg~~---~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIG-lG~IG~~ 185 (340)
T 4dgs_A 110 ARARRRNIDVTTTPGVL---ADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLG-LGQIGRA 185 (340)
T ss_dssp HHHHHTTCEEECCCSSS---HHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEEC-CSHHHHH
T ss_pred HHHHhCCEEEEECCCCC---cchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEEC-CCHHHHH
Confidence 34455689999975533 344444 3333221 1 1 48899999999 4899999
Q ss_pred HHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcc
Q 024871 123 WLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQV 202 (261)
Q Consensus 123 ~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v 202 (261)
++..+..+|+++....|..-. ..+ .....+++++++++|+|..-. +...+. ..-+
T Consensus 186 vA~~l~~~G~~V~~~dr~~~~----------~~~---~~~~~sl~ell~~aDvVil~v--P~t~~t----------~~li 240 (340)
T 4dgs_A 186 LASRAEAFGMSVRYWNRSTLS----------GVD---WIAHQSPVDLARDSDVLAVCV--AASAAT----------QNIV 240 (340)
T ss_dssp HHHHHHTTTCEEEEECSSCCT----------TSC---CEECSSHHHHHHTCSEEEECC----------------------
T ss_pred HHHHHHHCCCEEEEEcCCccc----------ccC---ceecCCHHHHHhcCCEEEEeC--CCCHHH----------HHHh
Confidence 999999999999887764311 112 244678999999999999863 111111 1224
Q ss_pred cHHHHHhcCCCcEEeeCC
Q 024871 203 DEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 203 ~~~~~~~a~~~~~~mH~l 220 (261)
+++.++..+++++|.-+.
T Consensus 241 ~~~~l~~mk~gailIN~a 258 (340)
T 4dgs_A 241 DASLLQALGPEGIVVNVA 258 (340)
T ss_dssp CHHHHHHTTTTCEEEECS
T ss_pred hHHHHhcCCCCCEEEECC
Confidence 666667677777776653
No 45
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.91 E-value=0.011 Score=55.20 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=66.5
Q ss_pred HHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHH-----------------h-C-CCCCcEEEEEcCCCchHHHHHHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPC--QIMADALTIIEH-----------------V-G-RLEGTKVVYVGDGNNIVHSWLLMA 127 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~-----------------~-g-~l~~~~i~~vGd~~~v~~S~~~~~ 127 (261)
+.++..+|+|.|+-+....+. .+++=++.+.++ + | .+.|++++++| .+++..+++..+
T Consensus 86 ~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIG-lG~IG~~vA~~l 164 (404)
T 1sc6_A 86 DAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIG-YGHIGTQLGILA 164 (404)
T ss_dssp HHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEEC-CSHHHHHHHHHH
T ss_pred HHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEe-ECHHHHHHHHHH
Confidence 344566899999754332222 233334444322 1 2 48999999999 589999999999
Q ss_pred hcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 128 SVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 128 ~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
..||++++...|..... .+ .+....++++.++++|+|..-
T Consensus 165 ~~~G~~V~~~d~~~~~~----------~~--~~~~~~~l~ell~~aDvV~l~ 204 (404)
T 1sc6_A 165 ESLGMYVYFYDIENKLP----------LG--NATQVQHLSDLLNMSDVVSLH 204 (404)
T ss_dssp HHTTCEEEEECSSCCCC----------CT--TCEECSCHHHHHHHCSEEEEC
T ss_pred HHCCCEEEEEcCCchhc----------cC--CceecCCHHHHHhcCCEEEEc
Confidence 99999999887743211 12 134566899999999999885
No 46
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.91 E-value=0.019 Score=55.09 Aligned_cols=95 Identities=12% Similarity=0.006 Sum_probs=71.6
Q ss_pred HhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 101 HVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 101 ~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
..| .+.|++|+++| .+++..+.+..+..+|+++++..|.. .-...+...|. + ..+++++++++|+|++.
T Consensus 270 ~~g~~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~-----~~~~~a~~~G~---~-~~~l~ell~~aDiVi~~ 339 (494)
T 3d64_A 270 ATDVMIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDP-----ICALQAAMEGY---R-VVTMEYAADKADIFVTA 339 (494)
T ss_dssp HHCCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCH-----HHHHHHHTTTC---E-ECCHHHHTTTCSEEEEC
T ss_pred ccccccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCh-----HhHHHHHHcCC---E-eCCHHHHHhcCCEEEEC
Confidence 345 59999999999 58899999999999999999887642 11112233442 2 34899999999999997
Q ss_pred cccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCC
Q 024871 180 VWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLP 221 (261)
Q Consensus 180 ~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP 221 (261)
. . ...-|+.+.++..|+++++..+..
T Consensus 340 ~----~------------t~~lI~~~~l~~MK~gAilINvgr 365 (494)
T 3d64_A 340 T----G------------NYHVINHDHMKAMRHNAIVCNIGH 365 (494)
T ss_dssp S----S------------SSCSBCHHHHHHCCTTEEEEECSS
T ss_pred C----C------------cccccCHHHHhhCCCCcEEEEcCC
Confidence 4 1 123478889999999999999876
No 47
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.87 E-value=0.014 Score=51.73 Aligned_cols=128 Identities=9% Similarity=0.120 Sum_probs=84.8
Q ss_pred HHhhhCCCcEEeCCCCCC---ChhHHHHHHH--HHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCC
Q 024871 69 DLAKFATVPVINGLTDYN---HPCQIMADAL--TIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGF 142 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~---HPtQ~L~Dl~--Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~ 142 (261)
+.++..+++|.|...... .-+.+.++.. -+.+.++ .+.|++|+++| .+++....+..+..+|++++++.|..
T Consensus 111 ~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~- 188 (293)
T 3d4o_A 111 QCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARES- 188 (293)
T ss_dssp HHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSH-
T ss_pred HHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCH-
Confidence 456667889999642100 0123444422 2334455 69999999999 58899999999999999988876632
Q ss_pred CCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 143 EPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 143 ~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+-.+.+++.|. ...-.+++++.++++|+|+... . ...++++.++..+++++++.+.
T Consensus 189 ----~~~~~~~~~g~-~~~~~~~l~~~l~~aDvVi~~~----p-------------~~~i~~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 189 ----DLLARIAEMGM-EPFHISKAAQELRDVDVCINTI----P-------------ALVVTANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp ----HHHHHHHHTTS-EEEEGGGHHHHTTTCSEEEECC----S-------------SCCBCHHHHHHSCTTCEEEECS
T ss_pred ----HHHHHHHHCCC-eecChhhHHHHhcCCCEEEECC----C-------------hHHhCHHHHHhcCCCCEEEEec
Confidence 22233445563 2222357889999999999874 1 0235667777788888888874
No 48
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=96.86 E-value=0.011 Score=54.46 Aligned_cols=92 Identities=12% Similarity=0.127 Sum_probs=62.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCc
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASM 184 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~ 184 (261)
+.|++|++|| .+++..+.+..+..||++++...|.. .++ .+.+.|. . ..++++.++++|+|..-. +.
T Consensus 174 l~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~---~~~---~~~~~g~---~-~~~l~ell~~aDvV~l~~--Pl 240 (365)
T 4hy3_A 174 IAGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWL---PRS---MLEENGV---E-PASLEDVLTKSDFIFVVA--AV 240 (365)
T ss_dssp SSSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSS---CHH---HHHHTTC---E-ECCHHHHHHSCSEEEECS--CS
T ss_pred cCCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCC---CHH---HHhhcCe---e-eCCHHHHHhcCCEEEEcC--cC
Confidence 6799999999 58999999999999999999887752 222 2344552 2 458999999999999853 11
Q ss_pred chhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 185 GQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 185 ~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
..+.+ .-++.+.++..+++++|.-+
T Consensus 241 t~~T~----------~li~~~~l~~mk~gailIN~ 265 (365)
T 4hy3_A 241 TSENK----------RFLGAEAFSSMRRGAAFILL 265 (365)
T ss_dssp SCC-------------CCCHHHHHTSCTTCEEEEC
T ss_pred CHHHH----------hhcCHHHHhcCCCCcEEEEC
Confidence 11111 22456666666666666544
No 49
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.81 E-value=0.0052 Score=55.84 Aligned_cols=66 Identities=17% Similarity=0.228 Sum_probs=49.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++..+.+..+..||++++...+..-.. + +........+++++++++|+|..-.
T Consensus 137 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-~---------~~~~~~~~~~l~ell~~aDvV~l~l 202 (324)
T 3hg7_A 137 GLKGRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRER-A---------GFDQVYQLPALNKMLAQADVIVSVL 202 (324)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC-T---------TCSEEECGGGHHHHHHTCSEEEECC
T ss_pred ccccceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHh-h---------hhhcccccCCHHHHHhhCCEEEEeC
Confidence 48899999999 58899999999999999998887644111 1 1112233568999999999999853
No 50
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.80 E-value=0.015 Score=54.19 Aligned_cols=67 Identities=15% Similarity=0.119 Sum_probs=51.6
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
.+.|++|++|| .+++..+++..+..||++++...|..-. . +.+++.|. ....++++.++++|+|..-
T Consensus 188 ~l~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~--~---~~~~~~G~---~~~~~l~ell~~aDvV~l~ 254 (393)
T 2nac_A 188 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP--E---SVEKELNL---TWHATREDMYPVCDVVTLN 254 (393)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC--H---HHHHHHTC---EECSSHHHHGGGCSEEEEC
T ss_pred cCCCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccc--h---hhHhhcCc---eecCCHHHHHhcCCEEEEe
Confidence 48899999999 5899999999999999999887764321 1 22345552 3346899999999999985
No 51
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.77 E-value=0.01 Score=54.61 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=51.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcE-EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFH-FVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~-~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|++|| .+++.++++..+..+|++ ++...+.... . +.+++.| +....++++.++++|+|..-.
T Consensus 161 ~l~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~--~---~~~~~~g---~~~~~~l~ell~~aDvV~l~~ 229 (364)
T 2j6i_A 161 DIEGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALP--K---DAEEKVG---ARRVENIEELVAQADIVTVNA 229 (364)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCC--H---HHHHHTT---EEECSSHHHHHHTCSEEEECC
T ss_pred cCCCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccc--h---hHHHhcC---cEecCCHHHHHhcCCEEEECC
Confidence 48999999999 589999999999999996 8877654322 1 1234455 344568999999999999853
No 52
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.76 E-value=0.014 Score=53.46 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=51.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
.+.|++|++|| .+++..+++..+..+|++++...|..- +. .+++.|. ....++++.++++|+|..-
T Consensus 165 ~l~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~---~~---~~~~~g~---~~~~~l~ell~~aDvV~l~ 230 (347)
T 1mx3_A 165 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS---DG---VERALGL---QRVSTLQDLLFHSDCVTLH 230 (347)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC---TT---HHHHHTC---EECSSHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcc---hh---hHhhcCC---eecCCHHHHHhcCCEEEEc
Confidence 58899999999 589999999999999999988876431 11 1234552 3456899999999999885
No 53
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.70 E-value=0.071 Score=50.26 Aligned_cols=130 Identities=14% Similarity=0.095 Sum_probs=88.0
Q ss_pred CCCcEEeC-CCC------CCChh-HHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCC
Q 024871 74 ATVPVING-LTD------YNHPC-QIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEP 144 (261)
Q Consensus 74 ~~vPVINa-~~~------~~HPt-Q~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~ 144 (261)
..+||||. ++. +.|-| |.+.|- +.+..+ .+.|++++++|- +++....+..+..+|++++++-+.
T Consensus 180 L~~Pvi~vnds~tK~~fDn~yGt~~s~~~g--i~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~d---- 252 (435)
T 3gvp_A 180 LCVPAMNVNDSVTKQKFDNLYCCRESILDG--LKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEID---- 252 (435)
T ss_dssp CCSCEEECTTCHHHHHHHTHHHHHHHHHHH--HHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC----
T ss_pred CCCCEEEecchhhhhhhhhhhhhHHHHHHH--HHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 57999996 431 12322 445443 344445 589999999995 779999999999999998876542
Q ss_pred CHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC
Q 024871 145 DKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER 224 (261)
Q Consensus 145 ~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r 224 (261)
+.....+...|. + ..+++++++++|+|++.. +. .--++.+.++..++++++.-..= -
T Consensus 253 -p~ra~~A~~~G~---~-v~~Leeal~~ADIVi~at----gt------------~~lI~~e~l~~MK~gailINvgr--g 309 (435)
T 3gvp_A 253 -PICALQACMDGF---R-LVKLNEVIRQVDIVITCT----GN------------KNVVTREHLDRMKNSCIVCNMGH--S 309 (435)
T ss_dssp -HHHHHHHHHTTC---E-ECCHHHHTTTCSEEEECS----SC------------SCSBCHHHHHHSCTTEEEEECSS--T
T ss_pred -hhhhHHHHHcCC---E-eccHHHHHhcCCEEEECC----CC------------cccCCHHHHHhcCCCcEEEEecC--C
Confidence 222233444552 2 357999999999999942 21 23488888999999999887642 2
Q ss_pred Ccccccccc
Q 024871 225 GVEVTEGVI 233 (261)
Q Consensus 225 g~Ev~~~v~ 233 (261)
+.||+-+.+
T Consensus 310 ~~EId~~~L 318 (435)
T 3gvp_A 310 NTEIDVASL 318 (435)
T ss_dssp TTTBTGGGG
T ss_pred CccCCHHHH
Confidence 356665544
No 54
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.65 E-value=0.029 Score=51.11 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=52.0
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHh-cCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMAS-VIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~-~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|++|| .+++..+++..+. .+|++++...|..-. . +.+.+.|. ...++++++++++|+|..-.
T Consensus 160 ~l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~--~---~~~~~~g~---~~~~~l~ell~~aDvVil~v 228 (348)
T 2w2k_A 160 NPRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPAD--A---ETEKALGA---ERVDSLEELARRSDCVSVSV 228 (348)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCC--H---HHHHHHTC---EECSSHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcc--h---hhHhhcCc---EEeCCHHHHhccCCEEEEeC
Confidence 48999999999 5899999999998 999999888764321 1 22334452 34468999999999998853
No 55
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.64 E-value=0.012 Score=52.84 Aligned_cols=92 Identities=14% Similarity=0.069 Sum_probs=64.6
Q ss_pred CCCcEEeCCCCCCChh--HHHHHHHHHHHHh-----------------C-CCCCcEEEEEcCCCchHHHHHHHHhcCCcE
Q 024871 74 ATVPVINGLTDYNHPC--QIMADALTIIEHV-----------------G-RLEGTKVVYVGDGNNIVHSWLLMASVIPFH 133 (261)
Q Consensus 74 ~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~-----------------g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~ 133 (261)
.+++|.|.-+....+. .+++=++.+.+++ + .+.|++|++|| .+++..+++..+..+|++
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~ 149 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLG-LGEIGTRVGKILAALGAQ 149 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEES-CSTHHHHHHHHHHHTTCE
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEc-cCHHHHHHHHHHHHCCCE
Confidence 5799999755333333 4455555553321 1 48899999999 589999999999999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 134 FVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 134 ~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
++...|..- .+ +. ....++++.++++|+|..-.
T Consensus 150 V~~~dr~~~--~~---------~~---~~~~~l~ell~~aDvV~l~~ 182 (303)
T 1qp8_A 150 VRGFSRTPK--EG---------PW---RFTNSLEEALREARAAVCAL 182 (303)
T ss_dssp EEEECSSCC--CS---------SS---CCBSCSHHHHTTCSEEEECC
T ss_pred EEEECCCcc--cc---------Cc---ccCCCHHHHHhhCCEEEEeC
Confidence 988876432 11 21 12457899999999998863
No 56
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.55 E-value=0.016 Score=52.72 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=71.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWAS 183 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~ 183 (261)
.+.|++++++| .+++....+..+..||+++....|.. .+. ..+.+. . ..++++.++++|+|..-. +
T Consensus 138 ~l~g~tvGIiG-~G~IG~~va~~~~~fg~~v~~~d~~~---~~~----~~~~~~---~-~~~l~ell~~sDivslh~--P 203 (334)
T 3kb6_A 138 ELNRLTLGVIG-TGRIGSRVAMYGLAFGMKVLCYDVVK---RED----LKEKGC---V-YTSLDELLKESDVISLHV--P 203 (334)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC---CHH----HHHTTC---E-ECCHHHHHHHCSEEEECC--C
T ss_pred eecCcEEEEEC-cchHHHHHHHhhcccCceeeecCCcc---chh----hhhcCc---e-ecCHHHHHhhCCEEEEcC--C
Confidence 36889999999 48899999999999999998887642 222 223442 2 458999999999998864 2
Q ss_pred cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCcccc
Q 024871 184 MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVT 229 (261)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~ 229 (261)
...+. ..-|+++.++..|+++++.-.. ||.=|+
T Consensus 204 lt~~T----------~~li~~~~l~~mk~~a~lIN~a---RG~iVd 236 (334)
T 3kb6_A 204 YTKET----------HHMINEERISLMKDGVYLINTA---RGKVVD 236 (334)
T ss_dssp CCTTT----------TTCBCHHHHHHSCTTEEEEECS---CGGGBC
T ss_pred CChhh----------ccCcCHHHHhhcCCCeEEEecC---cccccc
Confidence 22221 2458999999999999988753 554443
No 57
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.52 E-value=0.0073 Score=53.97 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=62.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWAS 183 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~ 183 (261)
.+.|+||+++| .+++..+++..+..+|++++...|..-... .+...++++++++++|+|..-. +
T Consensus 119 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~~~~~~~l~ell~~aDiV~l~~--P 182 (290)
T 3gvx_A 119 LLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-------------VDVISESPADLFRQSDFVLIAI--P 182 (290)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT-------------CSEECSSHHHHHHHCSEEEECC--C
T ss_pred eeecchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc-------------cccccCChHHHhhccCeEEEEe--e
Confidence 37899999999 589999999999999999998877532211 1244668999999999999864 1
Q ss_pred cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 184 MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
..... ..-++.+.++..+++++|..+
T Consensus 183 ~t~~t----------~~li~~~~l~~mk~gailIN~ 208 (290)
T 3gvx_A 183 LTDKT----------RGMVNSRLLANARKNLTIVNV 208 (290)
T ss_dssp CCTTT----------TTCBSHHHHTTCCTTCEEEEC
T ss_pred ccccc----------hhhhhHHHHhhhhcCceEEEe
Confidence 11111 122455666666666666654
No 58
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.52 E-value=0.03 Score=50.48 Aligned_cols=67 Identities=6% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC-CCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP-KGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P-~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|++|| .+++.++++..+..+|++++...| .. ... .+++.|. ...++++++++++|+|..-.
T Consensus 143 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~---~~~---~~~~~g~---~~~~~l~ell~~aDvVil~~ 210 (320)
T 1gdh_A 143 KLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA---SSS---DEASYQA---TFHDSLDSLLSVSQFFSLNA 210 (320)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC---CHH---HHHHHTC---EECSSHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCc---Chh---hhhhcCc---EEcCCHHHHHhhCCEEEEec
Confidence 47889999999 589999999999999999988876 43 221 2445563 34558999999999998853
No 59
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.49 E-value=0.011 Score=53.52 Aligned_cols=66 Identities=17% Similarity=0.261 Sum_probs=49.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++..+.+..+..||++++...|..-... +........++++.++++|+|..-.
T Consensus 134 ~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------~~~~~~~~~~l~ell~~aDvV~l~l 199 (324)
T 3evt_A 134 TLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPAD----------HFHETVAFTATADALATANFIVNAL 199 (324)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCT----------TCSEEEEGGGCHHHHHHCSEEEECC
T ss_pred cccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhH----------hHhhccccCCHHHHHhhCCEEEEcC
Confidence 47899999999 589999999999999999988766432211 1122233467899999999999853
No 60
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.48 E-value=0.0076 Score=54.85 Aligned_cols=125 Identities=14% Similarity=0.196 Sum_probs=80.3
Q ss_pred HHhhhCCCcEEeCCCCCCChhHHHHH-----HHHHHHH-------------------hC-CCCCcEEEEEcCCCchHHHH
Q 024871 69 DLAKFATVPVINGLTDYNHPCQIMAD-----ALTIIEH-------------------VG-RLEGTKVVYVGDGNNIVHSW 123 (261)
Q Consensus 69 ~~a~~~~vPVINa~~~~~HPtQ~L~D-----l~Ti~e~-------------------~g-~l~~~~i~~vGd~~~v~~S~ 123 (261)
+.++..+|+|.|+-+-. +++.++ ++.+.++ .| .+.|++|+++| .+++..++
T Consensus 81 ~~~~~~gI~v~n~p~~~---~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG-~G~IG~~v 156 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYS---PESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIG-TGRIGSRV 156 (334)
T ss_dssp HHHHHHTCEEECCTTSC---HHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEEC-CSHHHHHH
T ss_pred HHHHHCCeEEEECCCcC---cHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEEC-cCHHHHHH
Confidence 34455689999975532 334444 4443321 11 37789999999 58999999
Q ss_pred HHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCccc
Q 024871 124 LLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVD 203 (261)
Q Consensus 124 ~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~ 203 (261)
+..+..||++++...|.. .+. ..+.|. . ..+++++++++|+|..-. +...+. ..-++
T Consensus 157 A~~l~~~G~~V~~~d~~~---~~~----~~~~g~---~-~~~l~ell~~aDvV~l~~--P~t~~t----------~~li~ 213 (334)
T 2pi1_A 157 AMYGLAFGMKVLCYDVVK---RED----LKEKGC---V-YTSLDELLKESDVISLHV--PYTKET----------HHMIN 213 (334)
T ss_dssp HHHHHHTTCEEEEECSSC---CHH----HHHTTC---E-ECCHHHHHHHCSEEEECC--CCCTTT----------TTCBC
T ss_pred HHHHHHCcCEEEEECCCc---chh----hHhcCc---e-ecCHHHHHhhCCEEEEeC--CCChHH----------HHhhC
Confidence 999999999998887643 221 113342 3 346999999999998853 111111 12356
Q ss_pred HHHHHhcCCCcEEeeCC
Q 024871 204 EFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 204 ~~~~~~a~~~~~~mH~l 220 (261)
.+.++..+++++|..+.
T Consensus 214 ~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 214 EERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHSCTTEEEEECS
T ss_pred HHHHhhCCCCcEEEECC
Confidence 67777777777776653
No 61
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.39 E-value=0.014 Score=53.43 Aligned_cols=182 Identities=12% Similarity=0.002 Sum_probs=104.3
Q ss_pred eccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeC---Ccc-hHHHHh--------
Q 024871 4 IFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVF---GHQ-DILDLA-------- 71 (261)
Q Consensus 4 lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~---~~~-~~~~~a-------- 71 (261)
+|+.......-.|+.-....|..+.+.+... . .|. +..+ .=+|++++|.. ..+ .+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~----~~~~-~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~ 75 (343)
T 2yq5_A 5 AMYNVSPIEVPYIEDWAKKNDVEIKTTDQAL---T-SAT----VDLA-EGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIG 75 (343)
T ss_dssp EEESCCGGGHHHHHHHHHHHTCEEEEESSCC---S-TTG----GGGG-TTCSEEEECCSSCBCCHHHHHHHHHTTCCEEE
T ss_pred EEEecCcccHHHHHHHHHhCCeEEEECCCCC---C-HHH----HHHh-cCCcEEEEcCCCCcCHHHHHHhccccCceEEE
Confidence 4555555556667766667787777664321 1 122 1111 22688888742 233 333332
Q ss_pred --------------hhCCCcEEeCCCCCCChh--HHHHHHHHHHHH----------hC-----------CCCCcEEEEEc
Q 024871 72 --------------KFATVPVINGLTDYNHPC--QIMADALTIIEH----------VG-----------RLEGTKVVYVG 114 (261)
Q Consensus 72 --------------~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~----------~g-----------~l~~~~i~~vG 114 (261)
+..+|+|.|+-+-...+. .+++=++.+.++ .| .+.|++|++||
T Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiG 155 (343)
T 2yq5_A 76 LRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIG 155 (343)
T ss_dssp ESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEEC
T ss_pred ECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEe
Confidence 123678988754222222 223333433321 12 36789999999
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHH
Q 024871 115 DGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRK 194 (261)
Q Consensus 115 d~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~ 194 (261)
.+++..+++..+..||++++...|..- +. .+.+ +.. .+++++++++|+|..-. +...+.
T Consensus 156 -lG~IG~~vA~~l~~~G~~V~~~d~~~~---~~-----~~~~---~~~-~~l~ell~~aDvV~l~~--Plt~~t------ 214 (343)
T 2yq5_A 156 -VGHIGSAVAEIFSAMGAKVIAYDVAYN---PE-----FEPF---LTY-TDFDTVLKEADIVSLHT--PLFPST------ 214 (343)
T ss_dssp -CSHHHHHHHHHHHHTTCEEEEECSSCC---GG-----GTTT---CEE-CCHHHHHHHCSEEEECC--CCCTTT------
T ss_pred -cCHHHHHHHHHHhhCCCEEEEECCChh---hh-----hhcc---ccc-cCHHHHHhcCCEEEEcC--CCCHHH------
Confidence 589999999999999999998877431 11 0112 232 38999999999999864 111111
Q ss_pred hhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 195 QAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 195 ~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
..-++.+.++..+++++|.-+
T Consensus 215 ----~~li~~~~l~~mk~gailIN~ 235 (343)
T 2yq5_A 215 ----ENMIGEKQLKEMKKSAYLINC 235 (343)
T ss_dssp ----TTCBCHHHHHHSCTTCEEEEC
T ss_pred ----HHHhhHHHHhhCCCCcEEEEC
Confidence 123566666666667666655
No 62
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.38 E-value=0.079 Score=47.86 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=51.0
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++..+++..+..+|++++...|.. .. +.+++.|. . ..+++++++++|+|..-.
T Consensus 147 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~---~~---~~~~~~g~---~-~~~l~~~l~~aDvVil~v 212 (334)
T 2dbq_A 147 DVYGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTR---KE---EVERELNA---E-FKPLEDLLRESDFVVLAV 212 (334)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC---CH---HHHHHHCC---E-ECCHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCc---ch---hhHhhcCc---c-cCCHHHHHhhCCEEEECC
Confidence 48899999999 58999999999999999998887643 12 22345553 3 258999999999998853
No 63
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.37 E-value=0.015 Score=52.15 Aligned_cols=66 Identities=21% Similarity=0.275 Sum_probs=51.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++.++++..+..+|++++...|.. .. +.+.+.|. .. .+++++++++|+|..-.
T Consensus 139 ~l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~---~~---~~~~~~g~---~~-~~l~ell~~aDvV~l~~ 204 (307)
T 1wwk_A 139 ELEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYP---NE---ERAKEVNG---KF-VDLETLLKESDVVTIHV 204 (307)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC---CH---HHHHHTTC---EE-CCHHHHHHHCSEEEECC
T ss_pred ccCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCC---Ch---hhHhhcCc---cc-cCHHHHHhhCCEEEEec
Confidence 47899999999 58999999999999999998887743 22 23445563 22 38999999999998853
No 64
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.37 E-value=0.023 Score=51.33 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=49.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++|- +++...++..+..+|++++...|..-. . +.+.+.| +... +++++++++|+|..-.
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~--~---~~~~~~g---~~~~-~l~e~l~~aDvVi~~v 218 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPR--P---EEAAEFQ---AEFV-STPELAAQSDFIVVAC 218 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCC--H---HHHHTTT---CEEC-CHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcc--h---hHHHhcC---ceeC-CHHHHHhhCCEEEEeC
Confidence 378899999994 899999999999999998877764221 1 2233444 2334 8899999999998854
No 65
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.33 E-value=0.04 Score=49.99 Aligned_cols=63 Identities=11% Similarity=0.068 Sum_probs=49.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|++|| .+++...++..+..+|++++...|..-.. .| +....+++++++++|+|..-.
T Consensus 161 ~l~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------~g---~~~~~~l~ell~~aDvVil~v 223 (333)
T 3ba1_A 161 KFSGKRVGIIG-LGRIGLAVAERAEAFDCPISYFSRSKKPN----------TN---YTYYGSVVELASNSDILVVAC 223 (333)
T ss_dssp CCTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSSCCTT----------CC---SEEESCHHHHHHTCSEEEECS
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCchhc----------cC---ceecCCHHHHHhcCCEEEEec
Confidence 47899999999 58999999999999999988877643211 13 234678999999999998853
No 66
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.32 E-value=0.024 Score=50.88 Aligned_cols=60 Identities=20% Similarity=0.106 Sum_probs=47.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
.+.|++|++|| .+++..+++..+..+|++++...|..-... +. ..++++.++++|+|..-
T Consensus 141 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--------------~~-~~~l~ell~~aDvV~l~ 200 (311)
T 2cuk_A 141 DLQGLTLGLVG-MGRIGQAVAKRALAFGMRVVYHARTPKPLP--------------YP-FLSLEELLKEADVVSLH 200 (311)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSS--------------SC-BCCHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEEE-ECHHHHHHHHHHHHCCCEEEEECCCCcccc--------------cc-cCCHHHHHhhCCEEEEe
Confidence 47889999999 589999999999999999988876432111 11 35789999999999885
No 67
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.10 E-value=0.14 Score=45.13 Aligned_cols=130 Identities=12% Similarity=0.177 Sum_probs=84.7
Q ss_pred cchHHHHhhhCCCcEEeCCCCCCChhHHHHHHHH--------HHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEE
Q 024871 64 HQDILDLAKFATVPVINGLTDYNHPCQIMADALT--------IIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHF 134 (261)
Q Consensus 64 ~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl~T--------i~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~ 134 (261)
+..+.+.+...+++|.|..+. +.-+++--+. ..+..+ .+.|++|+++|- +++....+..+..+|+++
T Consensus 108 ~~d~~~~~~~~gi~v~~~~~~---~~v~~~r~~~~~~g~~~~~~~~~~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V 183 (300)
T 2rir_A 108 NAYLENIAAQAKRKLVKLFER---DDIAIYNSIPTVEGTIMLAIQHTDYTIHGSQVAVLGL-GRTGMTIARTFAALGANV 183 (300)
T ss_dssp CHHHHHHHHHTTCCEEEGGGS---HHHHHHHHHHHHHHHHHHHHHTCSSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHCCCEEEeecCC---CceEEEcCccHHHHHHHHHHHhcCCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEE
Confidence 334356667788999997542 2212221010 112233 599999999994 889999999999999998
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCc
Q 024871 135 VCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKA 214 (261)
Q Consensus 135 ~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~ 214 (261)
++..|.. +-.+.+.+.|. ......++++.++++|+|+... .. .-++++.++..++++
T Consensus 184 ~~~d~~~-----~~~~~~~~~g~-~~~~~~~l~~~l~~aDvVi~~~----p~-------------~~i~~~~~~~mk~g~ 240 (300)
T 2rir_A 184 KVGARSS-----AHLARITEMGL-VPFHTDELKEHVKDIDICINTI----PS-------------MILNQTVLSSMTPKT 240 (300)
T ss_dssp EEEESSH-----HHHHHHHHTTC-EEEEGGGHHHHSTTCSEEEECC----SS-------------CCBCHHHHTTSCTTC
T ss_pred EEEECCH-----HHHHHHHHCCC-eEEchhhHHHHhhCCCEEEECC----Ch-------------hhhCHHHHHhCCCCC
Confidence 8877632 22233344553 2222367899999999999974 11 235666777778888
Q ss_pred EEeeCC
Q 024871 215 YFMHCL 220 (261)
Q Consensus 215 ~~mH~l 220 (261)
++.-+.
T Consensus 241 ~lin~a 246 (300)
T 2rir_A 241 LILDLA 246 (300)
T ss_dssp EEEECS
T ss_pred EEEEEe
Confidence 888774
No 68
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.87 E-value=0.1 Score=50.12 Aligned_cols=100 Identities=22% Similarity=0.193 Sum_probs=67.6
Q ss_pred HhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHH-----------------h-C-CCCCcEEEEEcCCCchHHHHHHHHh
Q 024871 70 LAKFATVPVINGLTDYNHPC--QIMADALTIIEH-----------------V-G-RLEGTKVVYVGDGNNIVHSWLLMAS 128 (261)
Q Consensus 70 ~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~-----------------~-g-~l~~~~i~~vGd~~~v~~S~~~~~~ 128 (261)
.+...+|+|.|+-+....++ .+++=++.+.++ + | .+.|++|++|| .+++..+++..+.
T Consensus 84 ~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG-~G~IG~~vA~~l~ 162 (529)
T 1ygy_A 84 AATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVG-LGRIGQLVAQRIA 162 (529)
T ss_dssp HHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEEC-CSHHHHHHHHHHH
T ss_pred HHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEe-eCHHHHHHHHHHH
Confidence 34556789999754332222 233334443322 1 2 47889999999 5899999999999
Q ss_pred cCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 129 VIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 129 ~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+|++++...|.. .. +.+.+.|. ... +++++++++|+|..-.
T Consensus 163 ~~G~~V~~~d~~~---~~---~~a~~~g~---~~~-~l~e~~~~aDvV~l~~ 204 (529)
T 1ygy_A 163 AFGAYVVAYDPYV---SP---ARAAQLGI---ELL-SLDDLLARADFISVHL 204 (529)
T ss_dssp TTTCEEEEECTTS---CH---HHHHHHTC---EEC-CHHHHHHHCSEEEECC
T ss_pred hCCCEEEEECCCC---Ch---hHHHhcCc---EEc-CHHHHHhcCCEEEECC
Confidence 9999998887643 22 23555663 223 8999999999998853
No 69
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.78 E-value=0.045 Score=50.87 Aligned_cols=164 Identities=18% Similarity=0.182 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhc---cEEEEeeCCc-ch---HHHHhhhCCCcEEeCCCCCCChh--HHHHHHHHHHHHhC-CCCCcEEEE
Q 024871 43 TRDAARVLCRYN---DIIMARVFGH-QD---ILDLAKFATVPVINGLTDYNHPC--QIMADALTIIEHVG-RLEGTKVVY 112 (261)
Q Consensus 43 ~~Dt~~~ls~~~---D~iv~R~~~~-~~---~~~~a~~~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~g-~l~~~~i~~ 112 (261)
+++.+..+.... -.|=+-.+.. .. ++++-+..++||+| |..|=| =+++=++.-.+..| ++++.||++
T Consensus 121 ~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~---DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv 197 (388)
T 1vl6_A 121 EEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFH---DDQQGTAVVVSAAFLNALKLTEKKIEEVKVVV 197 (388)
T ss_dssp HHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEE---HHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEE
T ss_pred HHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhhcCcceec---cccccHHHHHHHHHHHHHHHhCCCCCCcEEEE
Confidence 566655555432 3444433322 22 33444456899999 344533 34555666667777 799999999
Q ss_pred EcCCCchHHHHHHHHhcCCc-EEEEeCCCCCC--------CCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccC
Q 024871 113 VGDGNNIVHSWLLMASVIPF-HFVCACPKGFE--------PDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWAS 183 (261)
Q Consensus 113 vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~--------~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~ 183 (261)
+|-+ .+.-..+..+...|. +++++--+|+- +.+.-...+++.+. .....+++|+++++||++..+
T Consensus 198 ~GAG-aAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--~~~~~~L~eav~~ADVlIG~S--- 271 (388)
T 1vl6_A 198 NGIG-AAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--ERLSGDLETALEGADFFIGVS--- 271 (388)
T ss_dssp ECCS-HHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT--TCCCSCHHHHHTTCSEEEECS---
T ss_pred ECCC-HHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc--cCchhhHHHHHccCCEEEEeC---
Confidence 9975 222222233333476 77777655321 33323344554431 122567999999999999874
Q ss_pred cchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC-CCCCCCccccccc
Q 024871 184 MGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC-LPAERGVEVTEGV 232 (261)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~-lP~~rg~Ev~~~v 232 (261)
.+.-+|+++++..+++.+|+-. =|. .|++.+.
T Consensus 272 --------------ap~l~t~emVk~Ma~~pIIfalSNPt---~E~~p~~ 304 (388)
T 1vl6_A 272 --------------RGNILKPEWIKKMSRKPVIFALANPV---PEIDPEL 304 (388)
T ss_dssp --------------CSSCSCHHHHTTSCSSCEEEECCSSS---CSSCHHH
T ss_pred --------------CCCccCHHHHHhcCCCCEEEEcCCCC---CCCCHHH
Confidence 1456899999888777776543 232 4666543
No 70
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.74 E-value=0.087 Score=47.69 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=49.0
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++.++++..+..||++++...|..-... +.+ +. ..++++.++++|+|..-.
T Consensus 142 ~l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--------~~~---~~-~~~l~ell~~aDvV~~~~ 205 (333)
T 1dxy_A 142 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD--------HPD---FD-YVSLEDLFKQSDVIDLHV 205 (333)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC--------CTT---CE-ECCHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCcchhh--------Hhc---cc-cCCHHHHHhcCCEEEEcC
Confidence 48899999999 589999999999999999998877432110 011 22 348999999999999864
No 71
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=95.65 E-value=0.12 Score=46.65 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=65.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCc
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASM 184 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~ 184 (261)
+.|++|+++| .+++.++++..+..+|++++...|..-.. + +.+ +. ..++++.++++|+|..-. +.
T Consensus 144 l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-------~-~~~---~~-~~~l~ell~~aDvV~~~~--p~ 208 (331)
T 1xdw_A 144 VRNCTVGVVG-LGRIGRVAAQIFHGMGATVIGEDVFEIKG-------I-EDY---CT-QVSLDEVLEKSDIITIHA--PY 208 (331)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCS-------C-TTT---CE-ECCHHHHHHHCSEEEECC--CC
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCccHH-------H-Hhc---cc-cCCHHHHHhhCCEEEEec--CC
Confidence 6789999999 58999999999999999998887643211 0 111 22 348999999999999853 11
Q ss_pred chhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 185 GQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 185 ~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
..+. ..-++++.++..++++++..+.
T Consensus 209 t~~t----------~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 209 IKEN----------GAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp CTTT----------CCSBCHHHHHTSCTTEEEEECS
T ss_pred chHH----------HHHhCHHHHhhCCCCcEEEECC
Confidence 1111 1336788888888888888876
No 72
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.59 E-value=0.059 Score=48.41 Aligned_cols=160 Identities=16% Similarity=0.143 Sum_probs=108.8
Q ss_pred HHHHHHHhcCCeEEEe--CCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcch----HHHHhhhC-------CCcEE
Q 024871 15 SFETGFSLLGGHAIYL--GPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQD----ILDLAKFA-------TVPVI 79 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l--~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~----~~~~a~~~-------~vPVI 79 (261)
+=..++..+|...... +.+.+ .|.+.+.+.-|+.= +|.|.+-.+-... -..+-+.- +.=-+
T Consensus 55 ~k~k~~~~~Gi~~~~~~lp~~~s----~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~ 130 (301)
T 1a4i_A 55 VKLKAAEEIGIKATHIKLPRTTT----ESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSI 130 (301)
T ss_dssp HHHHHHHHHTCEEEEEEECTTCC----HHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHH
T ss_pred HHHHHHHHcCCEEEEEECCCCCC----HHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChh
Confidence 3456899999987654 33322 44566666666653 5888888754322 22221111 11123
Q ss_pred eC----CC---CCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHH
Q 024871 80 NG----LT---DYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEK 151 (261)
Q Consensus 80 Na----~~---~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~ 151 (261)
|. .+ ...-||-+.+ ++.+.++.+ +++|++++++|-.+.|..-++.++...|.+++++.-
T Consensus 131 N~G~l~~g~~~~~~~PcTp~g-i~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs------------ 197 (301)
T 1a4i_A 131 NAGRLARGDLNDCFIPCTPKG-CLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS------------ 197 (301)
T ss_dssp HHHHHHTTCCSSCCCCHHHHH-HHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT------------
T ss_pred hHHHHhcCCCCCCccCchHHH-HHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEEC------------
Confidence 31 12 4578999999 888888887 699999999998767888888888889999988841
Q ss_pred HHHhCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 152 ARKAGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 152 ~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
. +.|+++.+++||+|++-. +.. .+ |+.+++ ++.+++.-..
T Consensus 198 ------~----t~~L~~~~~~ADIVI~Av----g~p-----------~~-I~~~~v---k~GavVIDVg 237 (301)
T 1a4i_A 198 ------K----TAHLDEEVNKGDILVVAT----GQP-----------EM-VKGEWI---KPGAIVIDCG 237 (301)
T ss_dssp ------T----CSSHHHHHTTCSEEEECC----CCT-----------TC-BCGGGS---CTTCEEEECC
T ss_pred ------C----cccHHHHhccCCEEEECC----CCc-----------cc-CCHHHc---CCCcEEEEcc
Confidence 1 468999999999999975 321 13 777775 4777877664
No 73
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.57 E-value=0.1 Score=46.43 Aligned_cols=159 Identities=16% Similarity=0.152 Sum_probs=108.0
Q ss_pred HHHHHHhcCCeEEE--eCCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcchH--HHHhhh------C-CCcEEe-C
Q 024871 16 FETGFSLLGGHAIY--LGPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQDI--LDLAKF------A-TVPVIN-G 81 (261)
Q Consensus 16 Fe~A~~~LGg~~~~--l~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~~--~~~a~~------~-~vPVIN-a 81 (261)
=..++..+|..... ++.+.+ .|.+.+.+.-|+.= +|.|.+-.+-...+ ..+-+. . +.=-+| |
T Consensus 53 k~k~~~~~Gi~~~~~~lp~~~s----~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g 128 (281)
T 2c2x_A 53 KHADCAKVGITSIRRDLPADIS----TATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLG 128 (281)
T ss_dssp HHHHHHHHTCEEEEEEECTTCC----HHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHH
T ss_pred HHHHHHHcCCEEEEEECCCCCC----HHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHH
Confidence 45689999998765 433322 45566677766664 58888887643221 111111 0 111233 1
Q ss_pred ----CCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHHHHHH
Q 024871 82 ----LTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVEKARK 154 (261)
Q Consensus 82 ----~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~~~~~ 154 (261)
+....-||-+.+ ++.+.++.+ +++|++++++|-.+.|..-++..+... |.+++++.-.
T Consensus 129 ~l~~g~~~~~PcTp~g-i~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~-------------- 193 (281)
T 2c2x_A 129 RLVLGTPAPLPCTPRG-IVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG-------------- 193 (281)
T ss_dssp HHHHTCCCCCCHHHHH-HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT--------------
T ss_pred HHhCCCCCCCCChHHH-HHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc--------------
Confidence 124688999999 888888887 799999999997666788888888787 8999887411
Q ss_pred hCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 155 AGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 155 ~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.|+.+.+++||+|++-. +.. .| |+.+++ ++.++++-..
T Consensus 194 --------t~~L~~~~~~ADIVI~Av----g~p-----------~~-I~~~~v---k~GavVIDVg 232 (281)
T 2c2x_A 194 --------TRDLPALTRQADIVVAAV----GVA-----------HL-LTADMV---RPGAAVIDVG 232 (281)
T ss_dssp --------CSCHHHHHTTCSEEEECS----CCT-----------TC-BCGGGS---CTTCEEEECC
T ss_pred --------hhHHHHHHhhCCEEEECC----CCC-----------cc-cCHHHc---CCCcEEEEcc
Confidence 368999999999999986 421 24 787775 5677777654
No 74
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.48 E-value=0.099 Score=47.27 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=49.1
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++.++++..+..+|++++...|.. .+. +++ +. ...+++++.++++|+|..-.
T Consensus 143 ~l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~---~~~----~~~-~~---~~~~~l~ell~~aDvV~l~~ 207 (333)
T 1j4a_A 143 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFR---NPE----LEK-KG---YYVDSLDDLYKQADVISLHV 207 (333)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC---CHH----HHH-TT---CBCSCHHHHHHHCSEEEECS
T ss_pred cCCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCc---chh----HHh-hC---eecCCHHHHHhhCCEEEEcC
Confidence 37789999999 58999999999999999998887643 222 122 21 22358999999999999853
No 75
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.47 E-value=0.07 Score=47.66 Aligned_cols=159 Identities=16% Similarity=0.110 Sum_probs=108.6
Q ss_pred HHHHHHhcCCeEEE--eCCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcchH--HHHhhhC-------CCcEEeC-
Q 024871 16 FETGFSLLGGHAIY--LGPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQDI--LDLAKFA-------TVPVING- 81 (261)
Q Consensus 16 Fe~A~~~LGg~~~~--l~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~~--~~~a~~~-------~vPVINa- 81 (261)
=..++..+|..... +..+.+ .|.+.+.+.-|+.= +|.|.+..+-...+ ..+-+.- +.=-+|.
T Consensus 54 k~k~~~~~Gi~~~~~~lp~~~s----~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g 129 (288)
T 1b0a_A 54 KRKACEEVGFVSRSYDLPETTS----EAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVG 129 (288)
T ss_dssp HHHHHHHHTCEECCEEECTTCC----HHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHH
T ss_pred HHHHHHHcCCEEEEEECCCCCC----HHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchh
Confidence 45688999998754 433322 35566666666654 58898887643322 2221111 1112331
Q ss_pred ----CCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 82 ----LTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 82 ----~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
+....-||-+.+ ++.+.++++ +++|++++++|-.+.|...++.++...|.+++++.-.
T Consensus 130 ~l~~g~~~~~PcTp~g-i~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------------- 192 (288)
T 1b0a_A 130 RLCQRAPRLRPCTPRG-IVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF---------------- 192 (288)
T ss_dssp HHHTTCCSSCCHHHHH-HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS----------------
T ss_pred HHhCCCCCCCCCcHHH-HHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC----------------
Confidence 124678999999 888888877 6999999999986678899988888899999988411
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.|+++.+++||+|++.. +.. .+ |+.+++ ++.+++.-..
T Consensus 193 ------t~~L~~~~~~ADIVI~Av----g~p-----------~l-I~~~~v---k~GavVIDVg 231 (288)
T 1b0a_A 193 ------TKNLRHHVENADLLIVAV----GKP-----------GF-IPGDWI---KEGAIVIDVG 231 (288)
T ss_dssp ------CSCHHHHHHHCSEEEECS----CCT-----------TC-BCTTTS---CTTCEEEECC
T ss_pred ------chhHHHHhccCCEEEECC----CCc-----------Cc-CCHHHc---CCCcEEEEcc
Confidence 368899999999999986 321 13 777765 5777877654
No 76
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.30 E-value=0.1 Score=47.16 Aligned_cols=66 Identities=15% Similarity=0.101 Sum_probs=50.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++| .+++..+++..+..+|++++...|.. .. +.+.+.| +.. .+++++++++|+|..-.
T Consensus 143 ~l~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~---~~---~~~~~~g---~~~-~~l~e~l~~aDiVil~v 208 (333)
T 2d0i_A 143 SLYGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHR---KV---NVEKELK---ARY-MDIDELLEKSDIVILAL 208 (333)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC---CH---HHHHHHT---EEE-CCHHHHHHHCSEEEECC
T ss_pred CCCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCc---ch---hhhhhcC---cee-cCHHHHHhhCCEEEEcC
Confidence 58899999999 58999999999999999998877643 11 2234455 233 38999999999998853
No 77
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.93 E-value=0.14 Score=45.60 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=107.1
Q ss_pred HHHHHHHhcCCeEEEe--CCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcch--HHHHhhh------C-CCcEEe-
Q 024871 15 SFETGFSLLGGHAIYL--GPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQD--ILDLAKF------A-TVPVIN- 80 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l--~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~--~~~~a~~------~-~vPVIN- 80 (261)
+=..++.++|...... +.+. ..|.+.+.++-|+.- .|.|.+-.+-... -..+-+. . +.=-+|
T Consensus 54 ~k~k~~~~~Gi~~~~~~lp~~~----s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~ 129 (285)
T 3l07_A 54 SKEKACAQVGIDSQVITLPEHT----TESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNV 129 (285)
T ss_dssp HHHHHHHHHTCEEEEEEECTTC----CHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHH
T ss_pred HHHHHHHHcCCeEEEEECCCCC----CHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhe
Confidence 3457899999987654 3332 245677777777765 6788887763321 1222111 1 122234
Q ss_pred C----CC-CCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH
Q 024871 81 G----LT-DYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK 154 (261)
Q Consensus 81 a----~~-~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~ 154 (261)
| +. ....||-..+=+ .+.++.+ .++|++++++|-.+-|...++.++...|++++++.-.
T Consensus 130 G~l~~g~~~~~~PcTp~gv~-~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------- 194 (285)
T 3l07_A 130 GRLQLRDKKCLESCTPKGIM-TMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF-------------- 194 (285)
T ss_dssp HHHHHTCTTCCCCHHHHHHH-HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------
T ss_pred eehhcCCCCCCCCCCHHHHH-HHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------
Confidence 1 13 568999998855 5555554 7999999999976668888888888889999887421
Q ss_pred hCCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 155 AGISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 155 ~g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.++++.+++||+|++.. +. ..+ |+.+++ +++++++-..
T Consensus 195 --------t~~L~~~~~~ADIVI~Av----g~-----------p~~-I~~~~v---k~GavVIDvg 233 (285)
T 3l07_A 195 --------TTDLKSHTTKADILIVAV----GK-----------PNF-ITADMV---KEGAVVIDVG 233 (285)
T ss_dssp --------CSSHHHHHTTCSEEEECC----CC-----------TTC-BCGGGS---CTTCEEEECC
T ss_pred --------chhHHHhcccCCEEEECC----CC-----------CCC-CCHHHc---CCCcEEEEec
Confidence 458899999999999985 32 123 777765 5777877654
No 78
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.82 E-value=0.078 Score=49.14 Aligned_cols=96 Identities=13% Similarity=0.045 Sum_probs=68.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE----------------------
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI---------------------- 162 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~---------------------- 162 (261)
+.+.||+++|- +.+....+..+..+|++++.+.+. ++.++.+++.|. .+..
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~lGa-~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVR-----PEVAEQVRSVGA-QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS-----GGGHHHHHHTTC-EECCCC-------------CHHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcCC-eEEeccccccccccchhhhhHHHHhh
Confidence 48899999996 789999999999999998876543 233455566653 2210
Q ss_pred -EcCHHHHhCCCCEEEEec-ccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 163 -TNDPKEVVQGADVVYSDV-WASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 163 -~~d~~~a~~~aDviy~~~-w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
..+++++++++|+|++.. ++ +. ..+.-|++++++..+++++|.-.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iP--g~----------~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVP--GR----------PAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCT--TS----------CCCCCBCHHHHHTSCTTCEEEET
T ss_pred hHHHHHHHHhcCCEEEECCCCC--Cc----------ccceeecHHHHhcCCCCcEEEEE
Confidence 135678999999999864 22 11 13567899999999998887654
No 79
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.66 E-value=0.17 Score=45.11 Aligned_cols=159 Identities=15% Similarity=0.104 Sum_probs=107.2
Q ss_pred HHHHHHhcCCeEEEe--CCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcc-----hH-HHHh--hhC-CCcEEeC-
Q 024871 16 FETGFSLLGGHAIYL--GPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQ-----DI-LDLA--KFA-TVPVING- 81 (261)
Q Consensus 16 Fe~A~~~LGg~~~~l--~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~-----~~-~~~a--~~~-~vPVINa- 81 (261)
=..++.++|...... +.+. ..|.+.+.++-++.- .|.|.+-.+-.. .+ +.+. |-. +.=-+|.
T Consensus 54 k~k~~~~~Gi~~~~~~lp~~~----s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g 129 (285)
T 3p2o_A 54 KAKACEECGIKSLVYHLNENI----TQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVG 129 (285)
T ss_dssp HHHHHHHHTCEEEEEEECTTC----CHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHH
T ss_pred HHHHHHHcCCeEEEEECCCCC----CHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhh
Confidence 456899999987654 3332 245677777777764 678888776332 22 2221 111 2223451
Q ss_pred ---CC-CC-CChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh
Q 024871 82 ---LT-DY-NHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA 155 (261)
Q Consensus 82 ---~~-~~-~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~ 155 (261)
.+ .. ..||-... ++.+.++.+ .++|++++++|-.+-|..-++.++...|++++++.-.
T Consensus 130 ~l~~g~~~g~~PcTp~g-v~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~--------------- 193 (285)
T 3p2o_A 130 YLNLGLESGFLPCTPLG-VMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK--------------- 193 (285)
T ss_dssp HHHTTCCSSCCCHHHHH-HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------
T ss_pred hhhcCCCCCCCCCCHHH-HHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---------------
Confidence 12 34 79999888 456666665 6999999999976668888888888889999888421
Q ss_pred CCCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 156 GISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 156 g~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.++++.+++||+|++.. +. ..+ |+.+++ +++++++-..
T Consensus 194 -------t~~L~~~~~~ADIVI~Av----g~-----------p~~-I~~~~v---k~GavVIDVg 232 (285)
T 3p2o_A 194 -------TKDLSLYTRQADLIIVAA----GC-----------VNL-LRSDMV---KEGVIVVDVG 232 (285)
T ss_dssp -------CSCHHHHHTTCSEEEECS----SC-----------TTC-BCGGGS---CTTEEEEECC
T ss_pred -------chhHHHHhhcCCEEEECC----CC-----------CCc-CCHHHc---CCCeEEEEec
Confidence 458899999999999985 32 123 777765 6778877654
No 80
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.56 E-value=0.096 Score=46.47 Aligned_cols=157 Identities=14% Similarity=0.086 Sum_probs=101.8
Q ss_pred HHHHHHhcCCeEEE--eCCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcchH--HHHhhhC-------CCcEEe-C
Q 024871 16 FETGFSLLGGHAIY--LGPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQDI--LDLAKFA-------TVPVIN-G 81 (261)
Q Consensus 16 Fe~A~~~LGg~~~~--l~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~~--~~~a~~~-------~vPVIN-a 81 (261)
=..++.++|. ... ++.+.+ .|.+.+.++-|+.- +|.|.+-.+-...+ ..+-+.- +.--+| |
T Consensus 48 k~k~~~~~Gi-~~~~~lp~~~s----~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G 122 (276)
T 3ngx_A 48 KIRRGKKIGI-AVDLEKYDDIS----MKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQG 122 (276)
T ss_dssp HHHHHHHHTC-EEEEEEESSCC----HHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHH
T ss_pred HHHHHHHCCe-EEEEECCCCCC----HHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchh
Confidence 4568899999 544 333322 34566666666654 67888877643322 2221111 111233 1
Q ss_pred ----CCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 82 ----LTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 82 ----~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
+.....||-..+=+ .+.|+++ ++|++++++|-.+.+...++..+...|++++++.-.
T Consensus 123 ~l~~g~~~~~PcTp~gv~-~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~----------------- 183 (276)
T 3ngx_A 123 LIALNREFLVPATPRAVI-DIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK----------------- 183 (276)
T ss_dssp HHHTTCCSSCCHHHHHHH-HHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-----------------
T ss_pred hhhcCCCCCCCCcHHHHH-HHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-----------------
Confidence 13456788666644 5556667 999999999986778888888888889999888421
Q ss_pred CeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 158 SKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 158 ~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.++++.+++||+|++.. +. +--|+.+++ ++++++.-..
T Consensus 184 -----t~~L~~~~~~ADIVI~Av----g~------------p~~I~~~~v---k~GavVIDvg 222 (276)
T 3ngx_A 184 -----TKDIGSMTRSSKIVVVAV----GR------------PGFLNREMV---TPGSVVIDVG 222 (276)
T ss_dssp -----CSCHHHHHHHSSEEEECS----SC------------TTCBCGGGC---CTTCEEEECC
T ss_pred -----cccHHHhhccCCEEEECC----CC------------CccccHhhc---cCCcEEEEec
Confidence 468899999999999975 32 112666654 6777777664
No 81
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.48 E-value=0.057 Score=50.46 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=68.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE--------------E-------
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIE--------------I------- 162 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~--------------~------- 162 (261)
++.+.||+++|- +.+....+..+..+|++++.+.+.. ..++.+++.|...+. +
T Consensus 187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~-----~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRP-----AAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSST-----THHHHHHHTTCEECCCCC-----------------CH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHcCCceeecccccccccccccchhhhcchh
Confidence 367899999996 7889999999999999988765432 234455565531111 1
Q ss_pred -----EcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 163 -----TNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 163 -----~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
..+++++++++|||++..-.. +. ..+.-+++++++..+++++|.=.
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlip-g~----------~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIP-GR----------PAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCS-SS----------CCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCC-CC----------CCCEEecHHHHhcCCCCCEEEEE
Confidence 125788999999999874111 21 13566899999999998887754
No 82
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.47 E-value=0.19 Score=44.77 Aligned_cols=161 Identities=17% Similarity=0.114 Sum_probs=108.7
Q ss_pred HHHHHHHhcCCeEEEeC-CCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcch--HHHHhhh------C-CCcEEeC-
Q 024871 15 SFETGFSLLGGHAIYLG-PDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQD--ILDLAKF------A-TVPVING- 81 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~-~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~--~~~~a~~------~-~vPVINa- 81 (261)
+=..++..+|....... |.++ ..|.+.+.++-|+.- .|.|.+-.+-... -..+-+. . +.=-+|.
T Consensus 55 ~k~k~~~~~Gi~~~~~~lp~~~---s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g 131 (286)
T 4a5o_A 55 HKRKDCEEVGFLSQAYDLPAET---SQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIG 131 (286)
T ss_dssp HHHHHHHHTTCEEEEEEECTTC---CHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHH
T ss_pred HHHHHHHHcCCeEEEEECCCCC---CHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhH
Confidence 34678999999876543 2222 245677777777764 5788887764331 1122111 1 1222341
Q ss_pred ----CCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 82 ----LTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 82 ----~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
+.....||-... ++.+.++++ .++|++++++|-.+.|..-++.++...|++++++.-.
T Consensus 132 ~l~~g~~~~~PcTp~g-v~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~---------------- 194 (286)
T 4a5o_A 132 RLAQRMPLLRPCTPKG-IMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF---------------- 194 (286)
T ss_dssp HHHTTCCSSCCHHHHH-HHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred HHhcCCCCCCCCCHHH-HHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC----------------
Confidence 235678998888 566677765 6999999999986778999988888899999988421
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.++++.+++||+|++.. +.. .+ |+.+++ +++++++-..
T Consensus 195 ------T~~L~~~~~~ADIVI~Av----g~p-----------~~-I~~~~v---k~GavVIDvg 233 (286)
T 4a5o_A 195 ------TRDLADHVSRADLVVVAA----GKP-----------GL-VKGEWI---KEGAIVIDVG 233 (286)
T ss_dssp ------CSCHHHHHHTCSEEEECC----CCT-----------TC-BCGGGS---CTTCEEEECC
T ss_pred ------CcCHHHHhccCCEEEECC----CCC-----------CC-CCHHHc---CCCeEEEEec
Confidence 358899999999999985 321 13 777765 6788887665
No 83
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.37 E-value=0.15 Score=45.51 Aligned_cols=81 Identities=21% Similarity=0.081 Sum_probs=53.8
Q ss_pred CChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE
Q 024871 86 NHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARKAGISKIEIT 163 (261)
Q Consensus 86 ~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~ 163 (261)
.|+++.+.++ ......||++|| .+++..|++..+...|. +++...+ +++.++.+++.|.. -..+
T Consensus 19 ~~~~~~~~~~-------~~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr-----~~~~~~~a~~~G~~-~~~~ 84 (314)
T 3ggo_A 19 SHMKNIIKIL-------KSLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-----NPESISKAVDLGII-DEGT 84 (314)
T ss_dssp -----------------CCCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-----CHHHHHHHHHTTSC-SEEE
T ss_pred cCcCcCCchh-------hhcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHCCCc-chhc
Confidence 4556555542 223457999999 69999999999988888 8776644 45566677777732 2457
Q ss_pred cCHHH-HhCCCCEEEEec
Q 024871 164 NDPKE-VVQGADVVYSDV 180 (261)
Q Consensus 164 ~d~~~-a~~~aDviy~~~ 180 (261)
.|+++ +++++|+|+.-.
T Consensus 85 ~~~~~~~~~~aDvVilav 102 (314)
T 3ggo_A 85 TSIAKVEDFSPDFVMLSS 102 (314)
T ss_dssp SCTTGGGGGCCSEEEECS
T ss_pred CCHHHHhhccCCEEEEeC
Confidence 88899 999999998864
No 84
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.21 E-value=0.42 Score=43.17 Aligned_cols=188 Identities=13% Similarity=0.061 Sum_probs=113.4
Q ss_pred HHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcchHHHHh--hhC-------CCcEEe-C-
Q 024871 15 SFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQDILDLA--KFA-------TVPVIN-G- 81 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~~~~~a--~~~-------~vPVIN-a- 81 (261)
+=..++..+|.......-. ..|.+.+.+.-++.= +|.|++-.+-...+.+-. +.- +.=-+| |
T Consensus 56 ~k~k~~~~~Gi~~~~~~l~-----~~~~l~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KDVDG~~~~n~g~ 130 (320)
T 1edz_A 56 WTQKTSESMGFRYDLRVIE-----DKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQN 130 (320)
T ss_dssp HHHHHHHHHTCEEEEEECS-----SGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECC-----ChHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcCChhhhHH
Confidence 3456889999987655321 126688888888875 689999886554443221 110 111122 0
Q ss_pred ------------CCCCCChhHHHHHHHHHHHH---------hC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 82 ------------LTDYNHPCQIMADALTIIEH---------VG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 82 ------------~~~~~HPtQ~L~Dl~Ti~e~---------~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
.....-||-+.+= +.+.++ +| +++|++++++|-++-|....+..+...|.+++++.
T Consensus 131 l~~~~~~l~~~~~~~~~~PcTp~a~-v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~n- 208 (320)
T 1edz_A 131 LYHNVRYLDKENRLKSILPCTPLAI-VKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD- 208 (320)
T ss_dssp HHTTCCBSSSSSCSBCCCCHHHHHH-HHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC-
T ss_pred HhcCCccccccccCCCcCCCcHHHH-HHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEe-
Confidence 0135789988776 555566 67 79999999999766678888888888899988663
Q ss_pred CC----CCCCHHHHHHHHHhCCCeEEE--E--cCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcC
Q 024871 140 KG----FEPDKETVEKARKAGISKIEI--T--NDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAG 211 (261)
Q Consensus 140 ~~----~~~~~~~~~~~~~~g~~~i~~--~--~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~ 211 (261)
.. +...+.+ +... .....+ + +++++++++||+|++-. +. ..+.|+.+++ +
T Consensus 209 R~~~~l~~ra~~l---a~~~-~~~t~~~~t~~~~L~e~l~~ADIVIsAt----g~-----------p~~vI~~e~v---k 266 (320)
T 1edz_A 209 VNNIQKFTRGESL---KLNK-HHVEDLGEYSEDLLKKCSLDSDVVITGV----PS-----------ENYKFPTEYI---K 266 (320)
T ss_dssp SSEEEEEESCCCS---SCCC-CEEEEEEECCHHHHHHHHHHCSEEEECC----CC-----------TTCCBCTTTS---C
T ss_pred CchHHHHhHHHHH---hhhc-ccccccccccHhHHHHHhccCCEEEECC----CC-----------CcceeCHHHc---C
Confidence 22 2111111 0000 011111 2 68999999999999976 32 1255777776 4
Q ss_pred CCcEEeeCCCCCCCccccccccc
Q 024871 212 PKAYFMHCLPAERGVEVTEGVIE 234 (261)
Q Consensus 212 ~~~~~mH~lP~~rg~Ev~~~v~~ 234 (261)
+.+++.-..- +| ++++++.+
T Consensus 267 ~GavVIDVgi-~r--D~d~~v~~ 286 (320)
T 1edz_A 267 EGAVCINFAC-TK--NFSDDVKE 286 (320)
T ss_dssp TTEEEEECSS-SC--CBCGGGGT
T ss_pred CCeEEEEcCC-Cc--ccchhHHh
Confidence 5666555432 24 44444443
No 85
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=94.17 E-value=0.054 Score=51.98 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=49.4
Q ss_pred CCC-cEEEEEcCCCchHHHHHHHHhcC------CcEEEEeCCCCCCCCHHHHHHHHHhCCCe-EEEEcCHHHHhCCCCEE
Q 024871 105 LEG-TKVVYVGDGNNIVHSWLLMASVI------PFHFVCACPKGFEPDKETVEKARKAGISK-IEITNDPKEVVQGADVV 176 (261)
Q Consensus 105 l~~-~~i~~vGd~~~v~~S~~~~~~~~------g~~~~~~~P~~~~~~~~~~~~~~~~g~~~-i~~~~d~~~a~~~aDvi 176 (261)
|+| +||++|| .+++.+|++..+... |+++++..... +...+.+++.|... -....++++++++||+|
T Consensus 51 L~GiKkIgIIG-lGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~----sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVV 125 (525)
T 3fr7_A 51 FKGIKQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKG----SKSFDEARAAGFTEESGTLGDIWETVSGSDLV 125 (525)
T ss_dssp TTTCSEEEEEC-CTTHHHHHHHHHHHHHHHTTCCCEEEEEECTT----CSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEE
T ss_pred hcCCCEEEEEe-EhHHHHHHHHHHHhcccccCCCCEEEEEeCCc----hhhHHHHHHCCCEEecCCCCCHHHHHhcCCEE
Confidence 778 9999999 588999998887776 88877553322 12234566677321 00124789999999999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 126 ILaV 129 (525)
T 3fr7_A 126 LLLI 129 (525)
T ss_dssp EECS
T ss_pred EECC
Confidence 9964
No 86
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.00 E-value=0.24 Score=44.46 Aligned_cols=161 Identities=16% Similarity=0.178 Sum_probs=106.1
Q ss_pred HHHHHHHhcCCeEEEeC-CCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcch--HHHHhhh------C-CCcEEe-C
Q 024871 15 SFETGFSLLGGHAIYLG-PDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQD--ILDLAKF------A-TVPVIN-G 81 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~-~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~--~~~~a~~------~-~vPVIN-a 81 (261)
+=..|+..+|....... |.++ ..|.+.+.++-|+.- +|.|.+-.+-... -..+-+. . +.=-+| |
T Consensus 57 ~k~k~~~~~Gi~~~~~~lp~~~---s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G 133 (300)
T 4a26_A 57 LKHKAAAEVGMASFNVELPEDI---SQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVG 133 (300)
T ss_dssp HHHHHHHHTTCEEEEEEECTTC---CHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHH
T ss_pred HHHHHHHHcCCeEEEEECCCCC---CHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEE
Confidence 44678999999876543 2222 245677777777664 6788887764322 1222221 1 122334 1
Q ss_pred -----C-CCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH
Q 024871 82 -----L-TDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK 154 (261)
Q Consensus 82 -----~-~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~ 154 (261)
. .....||-..+ ++.+.++.+ .++|++++++|-.+.+...++.++...|++++++.-.
T Consensus 134 ~l~~g~~~~~~~PcTp~g-v~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~-------------- 198 (300)
T 4a26_A 134 LLHYKGREPPFTPCTAKG-VIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG-------------- 198 (300)
T ss_dssp HHHCTTCCCSCCCHHHHH-HHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------
T ss_pred EeecCCCcCCCCCCCHHH-HHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC--------------
Confidence 1 24579999999 556666665 6999999999976778999988888889998887421
Q ss_pred hCCCeEEEEcCHH--HHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 155 AGISKIEITNDPK--EVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 155 ~g~~~i~~~~d~~--~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+.+++ +.+++||+|++.. +.. .+ |+.+++ +++++++-..
T Consensus 199 --------T~~l~l~~~~~~ADIVI~Av----g~p-----------~~-I~~~~v---k~GavVIDvg 239 (300)
T 4a26_A 199 --------TSTEDMIDYLRTADIVIAAM----GQP-----------GY-VKGEWI---KEGAAVVDVG 239 (300)
T ss_dssp --------SCHHHHHHHHHTCSEEEECS----CCT-----------TC-BCGGGS---CTTCEEEECC
T ss_pred --------CCCchhhhhhccCCEEEECC----CCC-----------CC-CcHHhc---CCCcEEEEEe
Confidence 22566 8999999999975 321 12 666664 6777777654
No 87
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.79 E-value=0.17 Score=43.37 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=52.6
Q ss_pred hCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc-C-HHHHhCCCCEEEEe
Q 024871 102 VGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN-D-PKEVVQGADVVYSD 179 (261)
Q Consensus 102 ~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~-d-~~~a~~~aDviy~~ 179 (261)
|-+++|++|.+||. +.|+-+.+..+...|.++++++|. +.+++.+.+++.+ +++.. . .++-++++|+|+.-
T Consensus 26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~---~~~~l~~l~~~~~---i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPT---VSAEINEWEAKGQ---LRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSS---CCHHHHHHHHTTS---CEEECSCCCGGGSSSCSEEEEC
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC---CCHHHHHHHHcCC---cEEEECCCCHhHhCCCCEEEEC
Confidence 44799999999995 789999999999999999999995 4555544444332 23221 1 24568999999986
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
+
T Consensus 99 T 99 (223)
T 3dfz_A 99 T 99 (223)
T ss_dssp C
T ss_pred C
Confidence 4
No 88
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.73 E-value=0.42 Score=45.18 Aligned_cols=69 Identities=22% Similarity=0.270 Sum_probs=43.3
Q ss_pred CCcEEEEEcCCCc-hHHHHHHHHh----cCCcEEEEeCCCCCCCCHHHHHHHHHh------CCCeEEEEcCHHHHhCCCC
Q 024871 106 EGTKVVYVGDGNN-IVHSWLLMAS----VIPFHFVCACPKGFEPDKETVEKARKA------GISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 106 ~~~~i~~vGd~~~-v~~S~~~~~~----~~g~~~~~~~P~~~~~~~~~~~~~~~~------g~~~i~~~~d~~~a~~~aD 174 (261)
++.||+++|.++- -...++..+. ..| ++++... +++.++..... ...+++.+.|+++|+++||
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di-----~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDL-----DFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECS-----SHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeC-----CHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCC
Confidence 4679999997642 1333333322 235 7776653 44444333221 1136888999999999999
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+...
T Consensus 78 fVI~ai 83 (450)
T 3fef_A 78 IVIISI 83 (450)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 999975
No 89
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.65 E-value=0.88 Score=39.05 Aligned_cols=162 Identities=9% Similarity=0.008 Sum_probs=92.6
Q ss_pred eccCCC--hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcch-------HHHHhhh-
Q 024871 4 IFAKPS--MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQD-------ILDLAKF- 73 (261)
Q Consensus 4 lF~~~S--tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~-------~~~~a~~- 73 (261)
+|-+|- ++.-.-+..++..+|....+.... . ..|.+.+.++-+....+.+-+-.+-... +...++.
T Consensus 6 ~~G~pi~hs~sp~~h~~~~~~~g~~~~y~~~~-~---~~~~l~~~i~~l~~~~~G~~vt~P~k~~i~~~~~~l~~~a~~~ 81 (263)
T 2d5c_A 6 VLGHPVAHSLSPAMHAFALESLGLEGSYEAWD-T---PLEALPGRLKEVRRAFRGVNLTLPLKEAALAHLDWVSPEAQRI 81 (263)
T ss_dssp EEESSCTTCSHHHHHHHHHHHTTCCEEEEEEE-C---CGGGHHHHHHHHHHHCSEEEECTTCTTGGGGGCSEECHHHHHH
T ss_pred EECCCcccccCHHHHHHHHHHcCCCCEEEEEe-C---CHHHHHHHHHhccccCceEEEcccCHHHHHHHHHHHhHHHHHh
Confidence 344552 334446788999999988775431 1 2456778777776655554443332222 1222332
Q ss_pred CC-CcEE-eCCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHH
Q 024871 74 AT-VPVI-NGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEK 151 (261)
Q Consensus 74 ~~-vPVI-Na~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~ 151 (261)
.. =+|+ |.+.-..+-|-...=+..+.+....++| +++++|- +++..+.+..+...|.+++++.+.. +...+.
T Consensus 82 gavn~i~~~~g~~~g~ntd~~g~~~~l~~~~~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~----~~~~~l 155 (263)
T 2d5c_A 82 GAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTP----QRALAL 155 (263)
T ss_dssp TCCCEEEEETTEEEEECCHHHHHHHHHHHTTCCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH----HHHHHH
T ss_pred CCCCcEEccCCeEEEeCCCHHHHHHHHHHhCCCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH----HHHHHH
Confidence 11 2444 3221122333332223333333236899 9999995 6688998888888888877776531 112223
Q ss_pred HHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 152 ARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 152 ~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+++.|. . .++++++ +++|+|+...
T Consensus 156 ~~~~~~-~---~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 156 AEEFGL-R---AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp HHHHTC-E---ECCGGGG-GGCSEEEECS
T ss_pred HHHhcc-c---hhhHhhc-cCCCEEEEcc
Confidence 445553 2 4678888 9999999875
No 90
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.57 E-value=0.76 Score=43.88 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=53.0
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|++|+++|- +.+..+.+..+..+|++++.+.| ++.-.+.+++.|. . ..+++++++++|+|+...
T Consensus 271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~-----~~~~~~~A~~~Ga-~---~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEI-----DPINALQAMMEGF-D---VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTC-E---ECCHHHHGGGCSEEEECS
T ss_pred CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHcCC-E---EecHHHHHhCCCEEEECC
Confidence 588999999995 88999999999999999887765 3344455667773 2 347889999999999864
No 91
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.57 E-value=0.15 Score=39.62 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+++|+++|- +++....+..+...|.+++++.+. ++-. +.+++.| ..+...++++++++++|+|+...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~-----~~~~~~~a~~~~-~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRN-----IDHVRAFAEKYE-YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESC-----HHHHHHHHHHHT-CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHHhC-CceEeecCHHHHhcCCCEEEEeC
Confidence 899999995 889998888888889886666542 2222 3355666 35566788999999999999875
No 92
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.56 E-value=0.27 Score=45.59 Aligned_cols=97 Identities=8% Similarity=0.008 Sum_probs=66.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-E--------------------
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-T-------------------- 163 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~-------------------- 163 (261)
+.|.+|+++|- +++....+..+..+|++++.+.+.. +..+.+++.|. .+.. .
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~-----~~~~~~~~lGa-~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRP-----EVKEQVQSMGA-EFLELDFKEEAGSGDGYAKVMSDAFI 242 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCG-----GGHHHHHHTTC-EECCC--------CCHHHHHHSHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHcCC-EEEEecccccccccccchhhccHHHH
Confidence 56899999995 7899999999999999887775532 23344556663 2211 0
Q ss_pred ----cCHHHHhCCCCEEEEec-ccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 164 ----NDPKEVVQGADVVYSDV-WASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 164 ----~d~~~a~~~aDviy~~~-w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
.++++.++++|+|+... |+. . ..+.-++++.++..+++.+|.-..
T Consensus 243 ~~~~~~l~e~~~~aDvVI~~~~~pg--~----------~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 243 KAEMELFAAQAKEVDIIVTTALIPG--K----------PAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCCTT--S----------CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHhCCCCEEEECCccCC--C----------CCCeeeCHHHHhcCCCCcEEEEEc
Confidence 03678888999999875 431 1 023457888888888877776553
No 93
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=93.47 E-value=0.85 Score=40.88 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=106.9
Q ss_pred HHHHHHhcCCeEEE--eCCCCcCCCCCCCHHHHHHHHhhh--ccEEEEeeCCcchH--HHHhhh------C-CCcEEeC-
Q 024871 16 FETGFSLLGGHAIY--LGPDDIQMGKREETRDAARVLCRY--NDIIMARVFGHQDI--LDLAKF------A-TVPVING- 81 (261)
Q Consensus 16 Fe~A~~~LGg~~~~--l~~~~s~~~kgEs~~Dt~~~ls~~--~D~iv~R~~~~~~~--~~~a~~------~-~vPVINa- 81 (261)
=..++.++|..... ++...+ .|.+.+.+.-|+.- +|.|++-.+-...+ ..+-+. . +.=-+|.
T Consensus 74 K~k~c~~vGi~s~~~~lp~~~s----e~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G 149 (303)
T 4b4u_A 74 KGNACRRVGMDSLKIELPQETT----TEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFG 149 (303)
T ss_dssp HHHHHHHTTCEEEEEEECTTCC----HHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHH
T ss_pred HHHHHHHcCCeEEEEecCccCC----HHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHH
Confidence 35689999998754 444332 34455555555553 57898887643322 111111 1 1112231
Q ss_pred ----CCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 82 ----LTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 82 ----~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
+....-||-.++ ++.|.++++ .++|+++++||-.+-|..-+..++..-+.++++|..+
T Consensus 150 ~L~~g~~~~~PcTp~g-v~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------------- 212 (303)
T 4b4u_A 150 RMAMGEAAYGSATPAG-IMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------------- 212 (303)
T ss_dssp HHHTTCCCCCCHHHHH-HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred HhcCCCCcccCccHHH-HHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC----------------
Confidence 234577887765 566667766 6999999999987778888888888889999988532
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCC
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLP 221 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP 221 (261)
+.|+++..++||+|++-. |. +.-|+.+++ ++++++.-.+-
T Consensus 213 ------T~dl~~~~~~ADIvV~A~----G~------------p~~i~~d~v---k~GavVIDVGi 252 (303)
T 4b4u_A 213 ------TQNLPELVKQADIIVGAV----GK------------AELIQKDWI---KQGAVVVDAGF 252 (303)
T ss_dssp ------CSSHHHHHHTCSEEEECS----CS------------TTCBCGGGS---CTTCEEEECCC
T ss_pred ------CCCHHHHhhcCCeEEecc----CC------------CCccccccc---cCCCEEEEece
Confidence 458899999999999975 53 233777764 57889888774
No 94
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.31 E-value=0.088 Score=49.05 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=94.5
Q ss_pred HHHHHHHHhhh---ccEEEEeeCCcc-h---HHHHhhhCCCcEEeCCCCCCChhHH--HHHHHHHHHHhC-CCCCcEEEE
Q 024871 43 TRDAARVLCRY---NDIIMARVFGHQ-D---ILDLAKFATVPVINGLTDYNHPCQI--MADALTIIEHVG-RLEGTKVVY 112 (261)
Q Consensus 43 ~~Dt~~~ls~~---~D~iv~R~~~~~-~---~~~~a~~~~vPVINa~~~~~HPtQ~--L~Dl~Ti~e~~g-~l~~~~i~~ 112 (261)
+++.+..+... +-.|=+-.++.. . ++++-+..++||+| |..|=|-+ |+=++.-.+.-| +++..||++
T Consensus 117 ~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~---DDiqGTa~V~lAall~al~l~g~~l~d~kVVi 193 (398)
T 2a9f_A 117 TEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKECHIPVFH---DDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVV 193 (398)
T ss_dssp HHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEE---HHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEE
T ss_pred HHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhcCCcceec---chhhhHHHHHHHHHHHHHHHhCCCCCccEEEE
Confidence 55554554443 245555554332 2 33444445799999 45555533 444554444444 589999999
Q ss_pred EcCCCchHHHHHHHHhcCCc-EEEEeCCCCC-------CCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEecccCc
Q 024871 113 VGDGNNIVHSWLLMASVIPF-HFVCACPKGF-------EPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDVWASM 184 (261)
Q Consensus 113 vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~-------~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~w~~~ 184 (261)
+|-+ ...-..+.++..+|. +++++--+++ .+.+.-..++++... .....+++|++++|||++-.+
T Consensus 194 ~GAG-aAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~--~~~~~~L~eav~~ADV~IG~S---- 266 (398)
T 2a9f_A 194 NGGG-SAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR--EFKSGTLEDALEGADIFIGVS---- 266 (398)
T ss_dssp ECCS-HHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC--TTCCCSCSHHHHTTCSEEECC----
T ss_pred ECCC-HHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc--ccchhhHHHHhccCCEEEecC----
Confidence 9975 222222333333477 8887765542 122222223443321 112457899999999998763
Q ss_pred chhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCCCccccccc
Q 024871 185 GQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAERGVEVTEGV 232 (261)
Q Consensus 185 ~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~rg~Ev~~~v 232 (261)
.+--+|+|+++..+++.+|+-.--. -.|++.+.
T Consensus 267 -------------apgl~T~EmVk~Ma~~pIIfalsNP--t~E~~pe~ 299 (398)
T 2a9f_A 267 -------------APGVLKAEWISKMAARPVIFAMANP--IPEIYPDE 299 (398)
T ss_dssp -------------STTCCCHHHHHTSCSSCEEEECCSS--SCSSCHHH
T ss_pred -------------CCCCCCHHHHHhhCCCCEEEECCCC--CccCCHHH
Confidence 1345899999988889898865321 24666553
No 95
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.09 E-value=0.35 Score=43.02 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+.+||+++|- +++...++..+...|.++++..+ +++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr-----~~~~~~~l~~~g---~~~~~~~~e~~~~aDvVi~~v 95 (320)
T 4dll_A 29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNR-----TPARAASLAALG---ATIHEQARAAARDADIVVSML 95 (320)
T ss_dssp CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHTTT---CEEESSHHHHHTTCSEEEECC
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcC-----CHHHHHHHHHCC---CEeeCCHHHHHhcCCEEEEEC
Confidence 46689999995 88888888888888998876643 445555555555 366889999999999999864
No 96
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.86 E-value=1 Score=39.09 Aligned_cols=158 Identities=19% Similarity=0.137 Sum_probs=92.8
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchH-------HHHhhh--CCCcEE
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDI-------LDLAKF--ATVPVI 79 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~-------~~~a~~--~~vPVI 79 (261)
++...=+..++..+|....+..-. . ..|.+.+.++-+... ++.+-+-.+-...+ ...|+. +--+|+
T Consensus 25 s~sp~~h~~~~~~~g~~~~y~~~~-~---~~~~l~~~i~~l~~~~~~G~nvtiP~k~~i~~~ld~l~~~A~~~gavnti~ 100 (275)
T 2hk9_A 25 SLSPVFQNALIRYAGLNAVYLAFE-I---NPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVK 100 (275)
T ss_dssp CSHHHHHHHHHHHHTCSEEEEEEE-C---CGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSEECHHHHHHTCCCEEE
T ss_pred ccCHHHHHHHHHHcCCCcEEEEEE-C---CHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHHHhhHHHHHhCCcceEE
Confidence 344556778999999987765332 1 246788888777654 45666554432221 223322 222565
Q ss_pred eCCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHH-HHHhCC
Q 024871 80 NGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEK-ARKAGI 157 (261)
Q Consensus 80 Na~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~-~~~~g~ 157 (261)
+-.| -..+-|-...=+..+.+.-..++|++|+++|- +++..+.+..+...|.+++++.+. ++-.+. +++.|
T Consensus 101 ~~~g~~~g~nTd~~G~~~~l~~~~~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~-----~~~~~~l~~~~g- 173 (275)
T 2hk9_A 101 FENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRT-----KEKAIKLAQKFP- 173 (275)
T ss_dssp EETTEEEEECCHHHHHHHHHHHHCTTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS-----HHHHHHHTTTSC-
T ss_pred eeCCEEEeecCCHHHHHHHHHHhCCCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHcC-
Confidence 4222 11222322222222333222588999999995 688888888887778888777543 222222 22233
Q ss_pred CeEEEEcCHHHHhCCCCEEEEec
Q 024871 158 SKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 158 ~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+...++++++++++|+|+...
T Consensus 174 --~~~~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 174 --LEVVNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp --EEECSCGGGTGGGCSEEEECS
T ss_pred --CeeehhHHhhhcCCCEEEEeC
Confidence 455668889999999999875
No 97
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=92.85 E-value=0.51 Score=40.49 Aligned_cols=98 Identities=22% Similarity=0.307 Sum_probs=57.1
Q ss_pred cEEEEE--cCCCchHHHHHHHHhc--CCcEEE-EeCCCCCCCCHHHHHHHHHhCCCeEEEEc-C----------HHHHh-
Q 024871 108 TKVVYV--GDGNNIVHSWLLMASV--IPFHFV-CACPKGFEPDKETVEKARKAGISKIEITN-D----------PKEVV- 170 (261)
Q Consensus 108 ~~i~~v--Gd~~~v~~S~~~~~~~--~g~~~~-~~~P~~~~~~~~~~~~~~~~g~~~i~~~~-d----------~~~a~- 170 (261)
+||+++ |.+.+ +..++..+.. ++.++. +++.+ ++....+.|++.|+..+.+.. + +.+.+
T Consensus 23 ~rI~~l~SG~g~~-~~~~l~~l~~~~~~~~I~~Vvt~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~ 98 (229)
T 3auf_A 23 IRIGVLISGSGTN-LQAILDGCREGRIPGRVAVVISDR---ADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQ 98 (229)
T ss_dssp EEEEEEESSCCHH-HHHHHHHHHTTSSSEEEEEEEESS---TTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred cEEEEEEeCCcHH-HHHHHHHHHhCCCCCeEEEEEcCC---CchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHHH
Confidence 689999 65444 3333333322 355543 22221 233456778888864332211 1 11222
Q ss_pred -CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCCc
Q 024871 171 -QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERGV 226 (261)
Q Consensus 171 -~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg~ 226 (261)
.+.|+|..-.|. ..|.+++++..+..++=+|| ||.+||.
T Consensus 99 ~~~~Dliv~agy~-----------------~IL~~~~l~~~~~~~iNiHpSLLP~yrG~ 140 (229)
T 3auf_A 99 AYGVDLVCLAGYM-----------------RLVRGPMLTAFPNRILNIHPSLLPAFPGL 140 (229)
T ss_dssp HTTCSEEEESSCC-----------------SCCCHHHHHHSTTCEEEEESSCTTSSCSS
T ss_pred hcCCCEEEEcChh-----------------HhCCHHHHhhccCCEEEEccCcCcCCCCc
Confidence 266777776542 45788888888888999999 8998853
No 98
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=92.69 E-value=0.51 Score=42.63 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=58.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCCCCCCHHHHHHHHHhCCCeEEEE---------cCHHHHh--CC
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKGFEPDKETVEKARKAGISKIEIT---------NDPKEVV--QG 172 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~~~~~~~~~~~~~~~g~~~i~~~---------~d~~~a~--~~ 172 (261)
..+||+|+|..+--++++-.+.. -+.++ ++..|+.-.-+..+.+.|+++|+..+... .+..+.+ .+
T Consensus 21 ~~mrIvf~G~~~fa~~~L~~L~~-~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l~~~~ 99 (329)
T 2bw0_A 21 QSMKIAVIGQSLFGQEVYCHLRK-EGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALG 99 (329)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH-TTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTTC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHH-CCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHHHHhcC
Confidence 44899999963222234433322 24443 44445421112345577888886433321 1111223 25
Q ss_pred CCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 173 ADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 173 aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.|+++.-.| ...|.+++++..+-.++-+|| ||++||
T Consensus 100 ~Dliv~a~y-----------------~~ilp~~il~~~~~g~iNiHpSLLP~yRG 137 (329)
T 2bw0_A 100 AELNVLPFC-----------------SQFIPMEIISAPRHGSIIYHPSLLPRHRG 137 (329)
T ss_dssp CSEEEESSC-----------------SSCCCHHHHTCSTTCEEEEESSCTTTTBS
T ss_pred CCEEEEeeh-----------------hhhCCHHHHhhCcCCEEEEcCCcCcCCCC
Confidence 677777643 234788888887778999999 799885
No 99
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=92.66 E-value=0.48 Score=45.45 Aligned_cols=155 Identities=15% Similarity=0.083 Sum_probs=84.7
Q ss_pred HHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCChhHHHHHH
Q 024871 16 FETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADA 95 (261)
Q Consensus 16 Fe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl 95 (261)
...=...+|..++.+ +..|-|++|..+.-++-+.+++-+.......+.+.+.-++|.+... -.=+...-.=|
T Consensus 175 ikrlL~~~Gi~v~~~------~pgg~t~~ei~~~~~A~~niv~~~~~g~~~A~~Le~r~GiP~i~~~--PiG~~~T~~~L 246 (525)
T 3aek_B 175 VTKLLATMGIKVNVC------APLGASPDDLRKLGQAHFNVLMYPETGESAARHLERACKQPFTKIV--PIGVGATRDFL 246 (525)
T ss_dssp HHHHHHTTTCEEEEE------EETTCCHHHHHTGGGSSEEEECCHHHHHHHHHHHHHHSCCCBCCCC--CCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEE------eCCCCCHHHHHhhccCCEEEEEChhhHHHHHHHHHHHcCCCceecC--CcCHHHHHHHH
Confidence 444456788888764 1235677777765555555554332223345566666677777631 11111111111
Q ss_pred HHHHHH----------------------hCCCCCcEEEEEcCCCchHHHHHHHH-hcCCcEEEEeCCCCCCCCHHHHHHH
Q 024871 96 LTIIEH----------------------VGRLEGTKVVYVGDGNNIVHSWLLMA-SVIPFHFVCACPKGFEPDKETVEKA 152 (261)
Q Consensus 96 ~Ti~e~----------------------~g~l~~~~i~~vGd~~~v~~S~~~~~-~~~g~~~~~~~P~~~~~~~~~~~~~ 152 (261)
..|.+. ...+.|+|+++.||. -.+.|++..+ .-+|++++.++-..-...+.+.+.+
T Consensus 247 r~ia~~~g~~~~i~~~r~~~~~~~~~~d~~~l~GKrv~i~gd~-~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~ 325 (525)
T 3aek_B 247 AEVSKITGLPVVTDESTLRQPWWSASVDSTYLTGKRVFIFGDG-THVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAA 325 (525)
T ss_dssp HHHHHHHCCCCCCCCTTCCHHHHHHSGGGGGGTTCEEEECSSH-HHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhhhhhcCCCEEEEEcCc-hHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHH
Confidence 111111 134789999999984 3567777777 6899988765432211222222334
Q ss_pred HHhCCCeEEEEcCHHH---HhC--CCCEEEEec
Q 024871 153 RKAGISKIEITNDPKE---VVQ--GADVVYSDV 180 (261)
Q Consensus 153 ~~~g~~~i~~~~d~~~---a~~--~aDviy~~~ 180 (261)
++.+ ..+.+.+|..+ .++ +.|+++.+.
T Consensus 326 ~~~~-~~v~i~~D~~el~~~i~~~~pDL~ig~~ 357 (525)
T 3aek_B 326 AEYG-LEALITDDYLEVEKAIEAAAPELILGTQ 357 (525)
T ss_dssp HHTT-CCCEECSCHHHHHHHHHHHCCSEEEECH
T ss_pred HhcC-CcEEEeCCHHHHHHHHhhcCCCEEEecc
Confidence 4455 34566667654 343 689999754
No 100
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.62 E-value=0.68 Score=40.28 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=49.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh-----------C--C---------CeEEEEcC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA-----------G--I---------SKIEITND 165 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~-----------g--~---------~~i~~~~d 165 (261)
+||+++|- +++..+++..++..|.++++..+. ++.++.+.+. | . ..+..+.|
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~-----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 78 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDIN-----TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDD 78 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCC
Confidence 68999995 789999999888889998877543 3333333221 1 0 13567899
Q ss_pred HHHHhCCCCEEEEec
Q 024871 166 PKEVVQGADVVYSDV 180 (261)
Q Consensus 166 ~~~a~~~aDviy~~~ 180 (261)
+++++++||+|+.-.
T Consensus 79 ~~~~~~~aDlVi~av 93 (283)
T 4e12_A 79 LAQAVKDADLVIEAV 93 (283)
T ss_dssp HHHHTTTCSEEEECC
T ss_pred HHHHhccCCEEEEec
Confidence 999999999999865
No 101
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.57 E-value=0.17 Score=45.53 Aligned_cols=67 Identities=27% Similarity=0.306 Sum_probs=50.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+++++|++|| .+++.++++..+...|.++++..+.. +...+.+++.|. ..+ +++++++++|+|+.-.
T Consensus 14 l~~~~I~IIG-~G~mG~alA~~L~~~G~~V~~~~~~~----~~~~~~a~~~G~---~~~-~~~e~~~~aDvVilav 80 (338)
T 1np3_A 14 IQGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSG----SATVAKAEAHGL---KVA-DVKTAVAAADVVMILT 80 (338)
T ss_dssp HHTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTT----CHHHHHHHHTTC---EEE-CHHHHHHTCSEEEECS
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHHCcCEEEEEECCh----HHHHHHHHHCCC---EEc-cHHHHHhcCCEEEEeC
Confidence 4578999999 58999999998888898887776542 222445666763 345 8889999999999864
No 102
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=92.57 E-value=0.55 Score=42.15 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCC-----CCC-CHHHHHHHHHhCCCeEEEEcCH-----HHHh--C
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKG-----FEP-DKETVEKARKAGISKIEITNDP-----KEVV--Q 171 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~-----~~~-~~~~~~~~~~~g~~~i~~~~d~-----~~a~--~ 171 (261)
.+||+|+|...--+.++-.+.. -|.++ ++..|+. ..+ +..+.+.|+++|+.-++ .+++ .+.+ .
T Consensus 3 ~mrIvf~Gt~~fa~~~L~~L~~-~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~~~~~~~~~~l~~~ 80 (314)
T 1fmt_A 3 SLRIIFAGTPDFAARHLDALLS-SGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PVSLRPQENQQLVAEL 80 (314)
T ss_dssp CCEEEEEECSHHHHHHHHHHHH-TTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CSCSCSHHHHHHHHHT
T ss_pred CCEEEEEecCHHHHHHHHHHHH-CCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cCCCCCHHHHHHHHhc
Confidence 5899999986544444433332 24554 3344421 111 23566788888864322 2221 1222 3
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|..-.| ...|.+++++..+-.++-+|| ||.+||
T Consensus 81 ~~Dliv~~~y-----------------~~ilp~~il~~~~~g~iNiHpSLLP~yRG 119 (314)
T 1fmt_A 81 QADVMVVVAY-----------------GLILPKAVLEMPRLGCINVHGSLLPRWRG 119 (314)
T ss_dssp TCSEEEEESC-----------------CSCCCHHHHHSSTTCEEEEESSSTTTTBS
T ss_pred CCCEEEEeec-----------------cccCCHHHHhhccCCEEEEcCCcCcCCCC
Confidence 6788887654 234788888887778999999 799885
No 103
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.54 E-value=1.8 Score=39.50 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=64.3
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE---E----------------Ec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIE---I----------------TN 164 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~---~----------------~~ 164 (261)
.+.|.+|+++|- +++....+..+..+|++++.+.+..- ..+.+++.|. .+. . ++
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~-----~~~~~~~~Ga-~~~~i~~~~~~~~~~~~~~~~~~s~ 241 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAA-----TKEQVESLGG-KFITVDDEAMKTAETAGGYAKEMGE 241 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCST-----THHHHHHTTC-EECCC--------------------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCC-eEEeecccccccccccccchhhcCH
Confidence 468999999995 78999999999999999777655332 1233455553 221 1 01
Q ss_pred C--------HHHHhCCCCEEEEec-ccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 165 D--------PKEVVQGADVVYSDV-WASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 165 d--------~~~a~~~aDviy~~~-w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
+ +++.++++|+|+... |+. . -.+.-++++.++..++..++.-..
T Consensus 242 ~~~~~~~~~l~~~~~~aDvVi~~~~~pg--~----------~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 242 EFRKKQAEAVLKELVKTDIAITTALIPG--K----------PAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ---CCHHHHHHHHHTTCSEEEECCCCTT--S----------CCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHhhhHHHHHHHhCCCCEEEECCccCC--C----------CCCeeeCHHHHhcCCCCCEEEEEe
Confidence 1 678899999999764 321 1 012346788888888877766543
No 104
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=92.54 E-value=2.6 Score=38.47 Aligned_cols=133 Identities=17% Similarity=0.120 Sum_probs=80.0
Q ss_pred HHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCChhHHHHH
Q 024871 15 SFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMAD 94 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~D 94 (261)
.|..++..|.|..+ ..+ ..|=+-+|++.+...|. ..++.|+--+++...-|--+.-=
T Consensus 101 ~~~~~~~~l~g~~i-pa~-----D~gt~~~~m~~~~~~~~-----------------~~tGk~~~~GGs~~~~~aTg~Gv 157 (355)
T 1c1d_A 101 IHAENIDKLSGNYW-TGP-----DVNTNSADMDTLNDTTE-----------------FVFGRSLERGGAGSSAFTTAVGV 157 (355)
T ss_dssp HHHHHHHHTTTSEE-EEE-----CTTCCHHHHHHHHHHCS-----------------CBCCCCGGGTSCCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCcc-cCC-----CCCCCHHHHHHHHHhcC-----------------eeeccchhhCCCCCchhHHHHHH
Confidence 45556666655422 111 12333466666666653 14566754454433333444555
Q ss_pred HHHHH---HHhC--CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHH
Q 024871 95 ALTII---EHVG--RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEV 169 (261)
Q Consensus 95 l~Ti~---e~~g--~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a 169 (261)
++.++ ++.| +++|++|+++|- +||....+..+..+|+++++..+. ++-.+.+++.|. +.. +.++.
T Consensus 158 ~~~~~~~~~~~G~~~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~-----~~~~~~a~~~ga---~~v-~~~el 227 (355)
T 1c1d_A 158 FEAMKATVAHRGLGSLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTD-----TERVAHAVALGH---TAV-ALEDV 227 (355)
T ss_dssp HHHHHHHHHHTTCCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHTTC---EEC-CGGGG
T ss_pred HHHHHHHHHhcCCCCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCC-----ccHHHHHHhcCC---EEe-ChHHh
Confidence 55554 3446 499999999994 889999999999999999866543 222334555652 222 55677
Q ss_pred hC-CCCEEEEec
Q 024871 170 VQ-GADVVYSDV 180 (261)
Q Consensus 170 ~~-~aDviy~~~ 180 (261)
++ ++||+....
T Consensus 228 l~~~~DIliP~A 239 (355)
T 1c1d_A 228 LSTPCDVFAPCA 239 (355)
T ss_dssp GGCCCSEEEECS
T ss_pred hcCccceecHhH
Confidence 77 899998643
No 105
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=92.34 E-value=0.73 Score=39.01 Aligned_cols=97 Identities=16% Similarity=0.195 Sum_probs=56.3
Q ss_pred cEEEEE--cCCCchHHHHHHHHhc--CCcEE--EEeCCCCCCCCHHHHHHHHHhCCCeEEEEcC-----------HHHHh
Q 024871 108 TKVVYV--GDGNNIVHSWLLMASV--IPFHF--VCACPKGFEPDKETVEKARKAGISKIEITND-----------PKEVV 170 (261)
Q Consensus 108 ~~i~~v--Gd~~~v~~S~~~~~~~--~g~~~--~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d-----------~~~a~ 170 (261)
+||+++ |.+.+.. .++..+.. ++.++ +++.|+ +....+.|+++|+..+.+... +.+.+
T Consensus 2 ~rI~vl~SG~g~~~~-~~l~~l~~~~~~~~i~~Vvs~~~----~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQ-AIIDAIESGKVNASIELVISDNP----KAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEECSCCHHHH-HHHHHHHTTSSCEEEEEEEESCT----TCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHH-HHHHHHHhCCCCCeEEEEEeCCC----ChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH
Confidence 588988 6554433 33333322 33354 333332 234567888998754332211 11222
Q ss_pred --CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCCc
Q 024871 171 --QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERGV 226 (261)
Q Consensus 171 --~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg~ 226 (261)
.+.|+|..-.| ...|.+++++..+..++=+|| ||.+||.
T Consensus 77 ~~~~~Dliv~a~y-----------------~~il~~~~l~~~~~~~iNiHpSLLP~yrG~ 119 (216)
T 2ywr_A 77 KKKGVELVVLAGF-----------------MRILSHNFLKYFPNKVINIHPSLIPAFQGL 119 (216)
T ss_dssp HHTTCCEEEESSC-----------------CSCCCHHHHTTSTTCEEEEESSCTTTTCST
T ss_pred HhcCCCEEEEeCc-----------------hhhCCHHHHhhccCCeEEEcCCcCcCCCCc
Confidence 26677777644 235788888887778999999 7998853
No 106
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=92.13 E-value=0.59 Score=39.49 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=54.8
Q ss_pred cEEEEE--cCCCchHHHHHHHHhc--CCcEEE--EeCCCCCCCCHHHHHHHHHhCCCeEEEEcC-----------HHHHh
Q 024871 108 TKVVYV--GDGNNIVHSWLLMASV--IPFHFV--CACPKGFEPDKETVEKARKAGISKIEITND-----------PKEVV 170 (261)
Q Consensus 108 ~~i~~v--Gd~~~v~~S~~~~~~~--~g~~~~--~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d-----------~~~a~ 170 (261)
+||+++ |.+.+... ++..+.. ++.++. +.-| ++....+.|+++|+..+.+... ..+.+
T Consensus 4 ~ki~vl~sG~g~~~~~-~l~~l~~~~l~~~I~~Vit~~----~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 4 KRLAVFASGSGTNFQA-IVDAAKRGDLPARVALLVCDR----PGAKVIERAARENVPAFVFSPKDYPSKAAFESEILREL 78 (212)
T ss_dssp EEEEEECCSSCHHHHH-HHHHHHTTCCCEEEEEEEESS----TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred cEEEEEEECCcHHHHH-HHHHHHhCCCCCeEEEEEeCC----CCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHH
Confidence 456555 55444333 3333222 355553 3332 2335677888998753322211 11222
Q ss_pred --CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 171 --QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 171 --~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.+.|+|..-.| ...+.+++++..+..++-+|| ||.+||
T Consensus 79 ~~~~~Dliv~a~y-----------------~~il~~~~l~~~~~~~iNiHpSLLP~yrG 120 (212)
T 3av3_A 79 KGRQIDWIALAGY-----------------MRLIGPTLLSAYEGKIVNIHPSLLPAFPG 120 (212)
T ss_dssp HHTTCCEEEESSC-----------------CSCCCHHHHHHTTTCEEEEESSCTTSSCS
T ss_pred HhcCCCEEEEchh-----------------hhhCCHHHHhhhcCCEEEEecCcCCCCCC
Confidence 25677776643 235788889888888999999 899886
No 107
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.01 E-value=0.56 Score=40.90 Aligned_cols=64 Identities=19% Similarity=0.213 Sum_probs=50.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- +++..+++..+...|.++++..+ +++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 4 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~d~-----~~~~~~~~~~~g---~~~~~~~~~~~~~aDvvi~~v 67 (302)
T 2h78_A 4 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDL-----VQSAVDGLVAAG---ASAARSARDAVQGADVVISML 67 (302)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECS-----SHHHHHHHHHTT---CEECSSHHHHHTTCSEEEECC
T ss_pred CEEEEEee-cHHHHHHHHHHHhCCCeEEEEcC-----CHHHHHHHHHCC---CeEcCCHHHHHhCCCeEEEEC
Confidence 68999994 88999998888888988887654 345555566665 356789999999999999864
No 108
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.01 E-value=0.57 Score=40.32 Aligned_cols=66 Identities=23% Similarity=0.132 Sum_probs=49.5
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC-CCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ-GADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~-~aDviy~~~ 180 (261)
+||+++| .+++..+++..+...|. ++++..+ .++..+.+++.|. ....++|++++++ ++|+|+.-.
T Consensus 2 ~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~-----~~~~~~~~~~~g~-~~~~~~~~~~~~~~~aDvVilav 70 (281)
T 2g5c_A 2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-----NPESISKAVDLGI-IDEGTTSIAKVEDFSPDFVMLSS 70 (281)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-----CHHHHHHHHHTTS-CSEEESCGGGGGGTCCSEEEECS
T ss_pred cEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeC-----CHHHHHHHHHCCC-cccccCCHHHHhcCCCCEEEEcC
Confidence 4899999 68999999988888887 7776654 3455566667773 2234678889999 999999864
No 109
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.01 E-value=0.85 Score=40.86 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=50.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH-----------HhCC-----------CeEEEEc
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR-----------KAGI-----------SKIEITN 164 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~-----------~~g~-----------~~i~~~~ 164 (261)
-.||++||- +.+..+++..++.-|.++++..+ +++.++.+. +.|. ..+..+.
T Consensus 6 ~~kI~vIGa-G~MG~~iA~~la~~G~~V~l~d~-----~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~ 79 (319)
T 2dpo_A 6 AGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDI-----EPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCCEEEECS-----CHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CceEEEEee-CHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeC
Confidence 478999995 88999999988888988887654 344443332 1231 1378899
Q ss_pred CHHHHhCCCCEEEEec
Q 024871 165 DPKEVVQGADVVYSDV 180 (261)
Q Consensus 165 d~~~a~~~aDviy~~~ 180 (261)
|+++++++||+|+.-.
T Consensus 80 ~~~eav~~aDlVieav 95 (319)
T 2dpo_A 80 NLAEAVEGVVHIQECV 95 (319)
T ss_dssp CHHHHTTTEEEEEECC
T ss_pred CHHHHHhcCCEEEEec
Confidence 9999999999999864
No 110
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.83 E-value=1.1 Score=39.70 Aligned_cols=67 Identities=18% Similarity=0.070 Sum_probs=49.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC-cEEEEeCCCCC--CCCHHHHHHHHHhCCCeEEEEc-CHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP-FHFVCACPKGF--EPDKETVEKARKAGISKIEITN-DPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g-~~~~~~~P~~~--~~~~~~~~~~~~~g~~~i~~~~-d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...| .++++..+..- +-.++..+.+.+.|. .. +++++++++|+|+.-.
T Consensus 25 m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-----~~~s~~e~~~~aDvVi~av 95 (317)
T 4ezb_A 25 TTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-----EPLDDVAGIACADVVLSLV 95 (317)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-----EEESSGGGGGGCSEEEECC
T ss_pred CeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-----CCCCHHHHHhcCCEEEEec
Confidence 6899999 5899999999888889 88887765321 111234455555663 55 7899999999999864
No 111
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.45 E-value=0.77 Score=39.17 Aligned_cols=67 Identities=19% Similarity=0.201 Sum_probs=47.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcE-EEEeCCCCCCCCHHHHHHHHHh-CCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFH-FVCACPKGFEPDKETVEKARKA-GISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~-~~~~~P~~~~~~~~~~~~~~~~-g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
++++||+++|- +++..+++..+...|.+ +.++.+ +++..+.+.+. | +..+.|++++++++|+|+.-.
T Consensus 8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~-----~~~~~~~~~~~~g---~~~~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSR-----TEESARELAQKVE---AEYTTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-----SHHHHHHHHHHTT---CEEESCGGGSCSCCSEEEECC
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeC-----CHHHHHHHHHHcC---CceeCCHHHHhcCCCEEEEec
Confidence 45679999995 88888888777777877 555543 34444444443 5 355788999999999999864
No 112
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.40 E-value=1.6 Score=38.13 Aligned_cols=64 Identities=17% Similarity=0.133 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+||+++| .+++..+++..+...|.++++..+..- ..+.+.+.| +..++|++++++ +|+|+.-.
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~-----~~~~~~~~g---~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIE-----AMTPLAEAG---ATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTT-----TSHHHHHTT---CEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHHCC---CEEcCCHHHHHh-CCEEEEEC
Confidence 36899999 588999999988888988887754322 223344555 356889999999 99999864
No 113
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=91.39 E-value=1.1 Score=37.97 Aligned_cols=99 Identities=13% Similarity=0.221 Sum_probs=54.5
Q ss_pred CcEEEEE--cCCCchHHHHHHHHhc-CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc----C-------HHHHh--
Q 024871 107 GTKVVYV--GDGNNIVHSWLLMASV-IPFHFVCACPKGFEPDKETVEKARKAGISKIEITN----D-------PKEVV-- 170 (261)
Q Consensus 107 ~~~i~~v--Gd~~~v~~S~~~~~~~-~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~----d-------~~~a~-- 170 (261)
.+||++. |.+.| ...++..+.. ++.++..+-.. .++..-++.|+++|+..+.+.. + +.+.+
T Consensus 5 ~~riavl~SG~Gsn-l~all~~~~~~~~~eI~~Vis~--~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~ 81 (215)
T 3tqr_A 5 PLPIVVLISGNGTN-LQAIIGAIQKGLAIEIRAVISN--RADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDH 81 (215)
T ss_dssp CEEEEEEESSCCHH-HHHHHHHHHTTCSEEEEEEEES--CTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHT
T ss_pred CcEEEEEEeCCcHH-HHHHHHHHHcCCCCEEEEEEeC--CcchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHh
Confidence 4677766 44333 3344443322 45554432211 1222335667777764333211 1 11233
Q ss_pred CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 171 QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 171 ~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.+.|+|..-.|. ..+.++.++..+..++=+|| ||.+||
T Consensus 82 ~~~Dliv~agy~-----------------~il~~~~l~~~~~~~iNiHpSLLP~yrG 121 (215)
T 3tqr_A 82 YDPKLIVLAGFM-----------------RKLGKAFVSHYSGRMINIHPSLLPKYTG 121 (215)
T ss_dssp TCCSEEEESSCC-----------------SCCCHHHHHHTTTSEEEEESSSTTTTCS
T ss_pred cCCCEEEEccch-----------------hhCCHHHHhhccCCeEEeCcccCCCCCC
Confidence 356888776542 34788888888778999999 899885
No 114
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=91.37 E-value=0.98 Score=40.61 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEE--EeCCC---C--CC-CCHHHHHHHHHhCCCeEEEEcCH-----HHHh--
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFV--CACPK---G--FE-PDKETVEKARKAGISKIEITNDP-----KEVV-- 170 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~--~~~P~---~--~~-~~~~~~~~~~~~g~~~i~~~~d~-----~~a~-- 170 (261)
+.+||+|+|-..--++++-.+... +.+++ +..|+ + .. .+..+.+.|+++|+..++ ..++ .+.+
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~-~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~~~~~~~~~~l~~ 83 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS-EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQ-PENFKSDESKQQLAA 83 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS-SSEEEEEECCCC---------CCCHHHHHHHHTTCCEEC-CSCSCSHHHHHHHHT
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC-CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEc-cCcCCCHHHHHHHHh
Confidence 358999999865556666554433 55543 33342 1 11 133566788888864322 2222 1223
Q ss_pred CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 171 QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 171 ~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.+.|+|+.-.| ...|.+++++..+-.++-+|| ||.+||
T Consensus 84 ~~~Dliv~~~y-----------------~~ilp~~~l~~~~~g~iNiHpSlLP~yRG 123 (318)
T 3q0i_A 84 LNADLMVVVAY-----------------GLLLPKVVLDTPKLGCINVHGSILPRWRG 123 (318)
T ss_dssp TCCSEEEESSC-----------------CSCCCHHHHTSSTTCEEEEESSSTTTTBS
T ss_pred cCCCEEEEeCc-----------------cccCCHHHHhhCcCCEEEeCCccCcCCCC
Confidence 35788887654 245788888877778999999 899885
No 115
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.07 E-value=0.82 Score=42.90 Aligned_cols=80 Identities=18% Similarity=0.115 Sum_probs=49.4
Q ss_pred HHHHHHHHhCC-CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH---------------hCC
Q 024871 94 DALTIIEHVGR-LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK---------------AGI 157 (261)
Q Consensus 94 Dl~Ti~e~~g~-l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~---------------~g~ 157 (261)
-.+|.....++ .+-.||+++| .+++..+++..++. |.+++.... +++.++.+++ .+.
T Consensus 22 ~~~~~~~~~~r~~~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~-----~~~~v~~l~~g~~~i~e~~l~~ll~~~~ 94 (432)
T 3pid_A 22 ASMTGGQQMGRGSEFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDI-----VQAKVDMLNQKISPIVDKEIQEYLAEKP 94 (432)
T ss_dssp -------------CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECS-----CHHHHHHHHTTCCSSCCHHHHHHHHHSC
T ss_pred hhccCCcccccccCCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEec-----CHHHhhHHhccCCccccccHHHHHhhcc
Confidence 34555555553 5567999999 58899999888887 988876543 3333333322 111
Q ss_pred CeEEEEcCHHHHhCCCCEEEEec
Q 024871 158 SKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 158 ~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..+..+.|+++++++||+|+.-.
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaV 117 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIAT 117 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECC
T ss_pred CCeEEEcCHHHHHhCCCEEEEeC
Confidence 35888999999999999988753
No 116
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.00 E-value=0.85 Score=40.43 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+||+||| .+++...++.-+.+-|.++++. ...++-.+.+.+.|. ...+++.|+++++|+|++-.
T Consensus 4 ~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~-----dr~~~~~~~l~~~Ga---~~a~s~~e~~~~~dvv~~~l 67 (300)
T 3obb_A 4 KQIAFIG-LGHMGAPMATNLLKAGYLLNVF-----DLVQSAVDGLVAAGA---SAARSARDAVQGADVVISML 67 (300)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEE-----CSSHHHHHHHHHTTC---EECSSHHHHHTTCSEEEECC
T ss_pred CEEEEee-ehHHHHHHHHHHHhCCCeEEEE-----cCCHHHHHHHHHcCC---EEcCCHHHHHhcCCceeecC
Confidence 5899999 5677777766666678887754 455666666666763 56889999999999999853
No 117
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=90.93 E-value=1.5 Score=36.94 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=53.6
Q ss_pred cEEEEEcCCC-chHHHHHHHHhc--CCcEE--EEeCCCCCCCCHHHHHHHHHhCCCeEEEEc-C----------HHHHhC
Q 024871 108 TKVVYVGDGN-NIVHSWLLMASV--IPFHF--VCACPKGFEPDKETVEKARKAGISKIEITN-D----------PKEVVQ 171 (261)
Q Consensus 108 ~~i~~vGd~~-~v~~S~~~~~~~--~g~~~--~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~-d----------~~~a~~ 171 (261)
+||++++-++ -...+++..+.. ++.++ +++.|+ +....+.|+++|+..+.+.. + +.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~----~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~ 76 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKA----DAFGLERARQAGIATHTLIASAFDSREAYDRELIHEID 76 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCT----TCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCC----chHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHH
Confidence 3566665432 234455544332 24443 333322 22345667777754332211 1 112232
Q ss_pred --CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCCc
Q 024871 172 --GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERGV 226 (261)
Q Consensus 172 --~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg~ 226 (261)
+.|+|..-.|. ..+.+++++..+..++-+|| ||.+||.
T Consensus 77 ~~~~Dliv~agy~-----------------~il~~~~l~~~~~~~iNiHpSlLP~yrG~ 118 (212)
T 1jkx_A 77 MYAPDVVVLAGFM-----------------RILSPAFVSHYAGRLLNIHPSLLPKYPGL 118 (212)
T ss_dssp GGCCSEEEESSCC-----------------SCCCHHHHHHTTTSEEEEESSCTTSCCSS
T ss_pred hcCCCEEEEeChh-----------------hhCCHHHHhhccCCEEEEccCcccCCCCc
Confidence 56777776542 34788888888878999999 7998853
No 118
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=90.89 E-value=0.9 Score=37.77 Aligned_cols=135 Identities=10% Similarity=-0.000 Sum_probs=80.2
Q ss_pred eccCCChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCC
Q 024871 4 IFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT 83 (261)
Q Consensus 4 lF~~~StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~ 83 (261)
+|.-|..+-+--|+..+..++..+...... -|.--..++-+..=+|+|+-|. +....+.++.++|||.-.-
T Consensus 8 ~~iapy~~l~~~~~~i~~e~~~~i~i~~~~------l~~~v~~a~~~~~~~dVIISRG---gta~~lr~~~~iPVV~I~~ 78 (196)
T 2q5c_A 8 ALISQNENLLNLFPKLALEKNFIPITKTAS------LTRASKIAFGLQDEVDAIISRG---ATSDYIKKSVSIPSISIKV 78 (196)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCEEEEEECC------HHHHHHHHHHHTTTCSEEEEEH---HHHHHHHTTCSSCEEEECC
T ss_pred EEEEccHHHHHHHHHHHhhhCCceEEEECC------HHHHHHHHHHhcCCCeEEEECC---hHHHHHHHhCCCCEEEEcC
Confidence 455566666667888888888765433221 1112233444433479999994 3455566778999999643
Q ss_pred CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 84 DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 84 ~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
+. -|++......... +.||++||- .|+....-..+..+|.++.+......+--+..++.+++.|
T Consensus 79 s~-------~Dil~al~~a~~~-~~kIavvg~-~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G 142 (196)
T 2q5c_A 79 TR-------FDTMRAVYNAKRF-GNELALIAY-KHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTEN 142 (196)
T ss_dssp CH-------HHHHHHHHHHGGG-CSEEEEEEE-SSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTT
T ss_pred CH-------hHHHHHHHHHHhh-CCcEEEEeC-cchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCC
Confidence 22 3555444433332 359999996 4444455556666787777665444332345566666666
No 119
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.81 E-value=0.45 Score=41.97 Aligned_cols=67 Identities=7% Similarity=-0.086 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
....||++|| .+++..+++..+...|.++++.. .+++..+.+.+.|. ....+++++++++|+|+.-.
T Consensus 7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~d-----r~~~~~~~~~~~g~---~~~~~~~e~~~~aDvVi~~v 73 (306)
T 3l6d_A 7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWN-----RSPGKAAALVAAGA---HLCESVKAALSASPATIFVL 73 (306)
T ss_dssp CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEC-----SSHHHHHHHHHHTC---EECSSHHHHHHHSSEEEECC
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEe-----CCHHHHHHHHHCCC---eecCCHHHHHhcCCEEEEEe
Confidence 4568999999 58899999888888888877654 34555555666662 55789999999999999864
No 120
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.73 E-value=0.31 Score=42.38 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=49.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+||+++| .+++..+++..+...|.++++..+. ++..+.+.+.| +..+++++++++++|+|+.-.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~~g---~~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRS-----PEKAEELAALG---AERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHHHHHTT---CEECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHCC---CeecCCHHHHHhcCCEEEEEc
Confidence 6899999 4889999998888889988876543 23334455555 356789999999999999864
No 121
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=90.62 E-value=1 Score=40.99 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=62.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhc---CC----cEEEEeC-CCCCCC-CHHHHHHHHHhC---CCeEEEEcCHHHHh
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASV---IP----FHFVCAC-PKGFEP-DKETVEKARKAG---ISKIEITNDPKEVV 170 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~---~g----~~~~~~~-P~~~~~-~~~~~~~~~~~g---~~~i~~~~d~~~a~ 170 (261)
+.....||+++|-.+++..+++.+++. +| .++.+.- |+.... .-..+| +.... ...+..+.|.++++
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~D-L~~~~~~~~~~~~~~~~~~~a~ 98 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAE-LEDCAFPLLDKVVVTADPRVAF 98 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTTCTTEEEEEEESCHHHHT
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhh-hhhcCccCCCcEEEcCChHHHh
Confidence 346778999999889999998776543 44 3565543 111100 001111 22211 24577889999999
Q ss_pred CCCCEEEEec-ccCcchhHHHH---HHHhhhcCCcccHHHHHhcCCCcEEee-CCCC
Q 024871 171 QGADVVYSDV-WASMGQKEEAA---YRKQAFQGFQVDEFLMKLAGPKAYFMH-CLPA 222 (261)
Q Consensus 171 ~~aDviy~~~-w~~~~~~~~~~---~~~~~~~~y~v~~~~~~~a~~~~~~mH-~lP~ 222 (261)
+|||+|+... .++..-++|.+ ...+.+ -.+-+++.+.+.|+++++- .=|+
T Consensus 99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~--~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIF--KEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHH--HHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHhHHHH--HHHHHHHHhhccCceEEEEeCCCc
Confidence 9999988863 22222223321 111111 1134455555678886543 3353
No 122
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.52 E-value=0.43 Score=42.30 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||++||- +++..+++..+...|. ++++..+.. .++..+.+++.| +..+++++++++++|+|+.-.
T Consensus 24 ~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~---~~~~~~~~~~~g---~~~~~~~~e~~~~aDvVi~~v 91 (312)
T 3qsg_A 24 AMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAAS---AESWRPRAEELG---VSCKASVAEVAGECDVIFSLV 91 (312)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSC---HHHHHHHHHHTT---CEECSCHHHHHHHCSEEEECS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCC---CHHHHHHHHHCC---CEEeCCHHHHHhcCCEEEEec
Confidence 479999994 8888888888777788 887765421 234455566666 356789999999999999864
No 123
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.48 E-value=0.75 Score=40.81 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=44.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- +++..+++..+..-|. ++++.....-......++.... .+ ..++..+.| .+++++||+|+...
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECC
Confidence 48999997 8888888777666565 7777654221111111121111 11 235776778 88999999988864
No 124
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.02 E-value=0.76 Score=41.36 Aligned_cols=76 Identities=22% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEE
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy 177 (261)
|+.+..||+++|- +++..+++..+..-|. ++++.....-......++.... .+ ..++..+.|. +++++||+|+
T Consensus 3 ~~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 3 GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp ---CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEE
T ss_pred CCCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEE
Confidence 3456789999996 8888888877766666 8887765332221122222111 11 2456667786 8999999988
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 81 iaa 83 (324)
T 3gvi_A 81 VTA 83 (324)
T ss_dssp ECC
T ss_pred Ecc
Confidence 863
No 125
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.95 E-value=1.2 Score=40.62 Aligned_cols=99 Identities=15% Similarity=0.074 Sum_probs=67.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hCCCeEEE----EcCHHHHhCCCCEEEE
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AGISKIEI----TNDPKEVVQGADVVYS 178 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~~----~~d~~~a~~~aDviy~ 178 (261)
.+.|++|+++|- +++....+..+..+|++++...+. ++-++.+++ .|. .+.. ..++++.++++|+|+.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~-----~~~l~~~~~~~g~-~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDIN-----IDKLRQLDAEFCG-RIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTT-SSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhcCC-eeEeccCCHHHHHHHHcCCCEEEE
Confidence 378999999996 889999999999999988776543 344455555 452 2211 2356788899999998
Q ss_pred ecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCC
Q 024871 179 DVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCL 220 (261)
Q Consensus 179 ~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~l 220 (261)
..-.... -.+..++++.++..++..++.-..
T Consensus 238 ~~~~p~~-----------~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGA-----------KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTS-----------CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCC-----------CCcceecHHHHhcCCCCcEEEEEe
Confidence 6411111 123556888888888877776654
No 126
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.83 E-value=0.93 Score=39.50 Aligned_cols=65 Identities=15% Similarity=0.296 Sum_probs=48.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc---EEEEeCCCCCCCCHHHHHHHHH-hCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF---HFVCACPKGFEPDKETVEKARK-AGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~---~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+||+++|- +++..+++..+..-|. +++++.+. ++..+.+.+ .| +..+.|..++++++|+|+.-.
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~-----~~~~~~l~~~~g---i~~~~~~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRS-----LDKLDFFKEKCG---VHTTQDNRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSS-----SHHHHHHHHTTC---CEEESCHHHHHSSCSEEEECS
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCC-----HHHHHHHHHHcC---CEEeCChHHHHhcCCeEEEEe
Confidence 578999996 8899999888877776 67766553 233444444 35 356789999999999999865
No 127
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.78 E-value=1.2 Score=38.99 Aligned_cols=66 Identities=12% Similarity=-0.036 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++| .+++..+++..+...|.++++..+ +++..+.+.+.|.. ..+.+++++++++|+|+.-.
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-----~~~~~~~~~~~g~~--~~~~~~~e~~~~aDvvi~~v 72 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADL-----NPQACANLLAEGAC--GAAASAREFAGVVDALVILV 72 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTCS--EEESSSTTTTTTCSEEEECC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEEC-----CHHHHHHHHHcCCc--cccCCHHHHHhcCCEEEEEC
Confidence 46899999 588999999888888998886643 45555666666632 23778999999999999864
No 128
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.64 E-value=1.5 Score=39.87 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=50.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCC---CEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGA---DVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~a---Dviy~~~ 180 (261)
++++||++|| .+++..+++..+...|.++++... .++..+.+.+.|. ..+.+++++++++ |+|++-.
T Consensus 20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr-----~~~~~~~l~~~g~---~~~~s~~e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDL-----NVNAVQALEREGI---AGARSIEEFCAKLVKPRVVWLMV 89 (358)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHTTTC---BCCSSHHHHHHHSCSSCEEEECS
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHHCCC---EEeCCHHHHHhcCCCCCEEEEeC
Confidence 4678999999 588999999888888988876643 4455555555552 4578999999999 9998864
No 129
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.57 E-value=9.5 Score=33.31 Aligned_cols=168 Identities=13% Similarity=0.045 Sum_probs=97.0
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCC--cCCCCCCCHHHHHHHHhhh-ccEEEEeeC-Ccch------HHHHhhhCC-C-c
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDD--IQMGKREETRDAARVLCRY-NDIIMARVF-GHQD------ILDLAKFAT-V-P 77 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~--s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~-~~~~------~~~~a~~~~-v-P 77 (261)
+++-.=+..++.++|....|..-.. ..+ ..|.+.+.++.+... ...+-+=.+ +... +.+.|+..+ | -
T Consensus 17 S~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v-~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNT 95 (283)
T 3jyo_A 17 SRTPAMHEAEGLAQGRATVYRRIDTLGSRA-SGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNT 95 (283)
T ss_dssp CSHHHHHHHHHHHTTCCEEEEEEETTSTTT-TTCCHHHHHHHHHHTTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCE
T ss_pred cccHHHHHHHHHHcCCCeEEEEEEccccCC-CHHHHHHHHHHHhhCCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceE
Confidence 3444557788899999877753211 111 357889888876543 344444443 2222 123333221 1 2
Q ss_pred EEeC-CC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHH
Q 024871 78 VING-LT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARK 154 (261)
Q Consensus 78 VINa-~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~ 154 (261)
|++- ++ -..|=|-...=+..+.+....++|++++++|- +.+..+.+..+...|. +++++.-.. .-.+++.+....
T Consensus 96 v~~~~~g~l~G~NTD~~G~~~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~-~~a~~la~~~~~ 173 (283)
T 3jyo_A 96 VVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT-SRAQALADVINN 173 (283)
T ss_dssp EEECTTSCEEEECHHHHHHHHHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSH-HHHHHHHHHHHH
T ss_pred EEECCCCeEEEecCCHHHHHHHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCH-HHHHHHHHHHHh
Confidence 4443 33 23455544444444555545799999999997 6788888888888898 788775421 111122222222
Q ss_pred h-CCCeEEEEc--CHHHHhCCCCEEEEec
Q 024871 155 A-GISKIEITN--DPKEVVQGADVVYSDV 180 (261)
Q Consensus 155 ~-g~~~i~~~~--d~~~a~~~aDviy~~~ 180 (261)
. ....+...+ +++++++++|+|+..+
T Consensus 174 ~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 174 AVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp HHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred hcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 2 112454544 7888999999999875
No 130
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.52 E-value=0.61 Score=41.15 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=50.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+..||+++| .+++..+++..+...|.++++..+. ++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~l~~~g---~~~~~~~~~~~~~aDvvi~~v 85 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRT-----LSKCDELVEHG---ASVCESPAEVIKKCKYTIAML 85 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHHHHHTT---CEECSSHHHHHHHCSEEEECC
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHCC---CeEcCCHHHHHHhCCEEEEEc
Confidence 3457999999 4889999998888889988876543 23334455555 356789999999999999864
No 131
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=89.44 E-value=2 Score=38.49 Aligned_cols=100 Identities=21% Similarity=0.233 Sum_probs=61.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCC-----CC-CCHHHHHHHHHhCCCeEEEEcCH-----HHHh--C
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKG-----FE-PDKETVEKARKAGISKIEITNDP-----KEVV--Q 171 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~-----~~-~~~~~~~~~~~~g~~~i~~~~d~-----~~a~--~ 171 (261)
.+||+|+|-..--+.++-.+... |.++ ++..|+. .. .+..+.+.|+++|+. +....++ .+.+ .
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~-~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~l~~~ 79 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS-SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIP-IIQPFSLRDEVEQEKLIAM 79 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS-SSEEEEEECCCC----------CCHHHHHHHHTTCC-EECCSCSSSHHHHHHHHTT
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCC-EECcccCCCHHHHHHHHhc
Confidence 47999999876666666444432 4443 3333432 11 133466788888864 3222222 1223 3
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|++-.| .+.|.+++++..+-.++-+|| ||.+||
T Consensus 80 ~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 118 (314)
T 3tqq_A 80 NADVMVVVAY-----------------GLILPKKALNAFRLGCVNVHASLLPRWRG 118 (314)
T ss_dssp CCSEEEEESC-----------------CSCCCHHHHTSSTTCEEEEESSCTTTTBS
T ss_pred CCCEEEEcCc-----------------ccccCHHHHhhCcCCEEEecCccccCCCC
Confidence 6788888754 245788888877778999999 899885
No 132
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=89.43 E-value=3.4 Score=34.94 Aligned_cols=38 Identities=24% Similarity=0.174 Sum_probs=29.3
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCCc
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERGV 226 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg~ 226 (261)
+.|+|..-.|. ..|.+++++..+..++-+|| ||.+||.
T Consensus 81 ~~Dliv~agy~-----------------~Il~~~~l~~~~~~~iNiHpSLLP~yrG~ 120 (211)
T 3p9x_A 81 QIDFVVLAGYM-----------------RLVGPTLLGAYEGRIVNIHPSLLPAFPGL 120 (211)
T ss_dssp TCCEEEESSCC-----------------SCCCHHHHHHHTTSEEEEESSCTTSSCSS
T ss_pred CCCEEEEeCch-----------------hhcCHHHHhhccCCeEEECCccCCCCCCc
Confidence 57888877542 45788888888878999999 8998853
No 133
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.38 E-value=0.95 Score=38.46 Aligned_cols=64 Identities=22% Similarity=0.274 Sum_probs=47.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...|.++++..+. -.++..+.+.+.|. . .+++++++++|+|+.-.
T Consensus 1 M~I~iIG-~G~mG~~la~~l~~~g~~V~~~~~~---~~~~~~~~~~~~g~---~--~~~~~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEG---RSPSTIERARTVGV---T--ETSEEDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTT---CCHHHHHHHHHHTC---E--ECCHHHHHTSSEEEECS
T ss_pred CeEEEEe-chHHHHHHHHHHHHCCCeEEEeCCc---cCHHHHHHHHHCCC---c--CCHHHHHhcCCEEEEEC
Confidence 3799999 5889999988887888888875441 14455555666663 2 67788999999999864
No 134
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.34 E-value=1.7 Score=38.54 Aligned_cols=70 Identities=19% Similarity=0.141 Sum_probs=42.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- +++..+++..+..-|. ++++.-.+.- ......+... .....+..+.|. +++++||+|+...
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~-~~~~~i~~t~d~-~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEI-FNLPNVEISKDL-SASAHSKVVIFTV 85 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHH-HTCTTEEEESCG-GGGTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhh-hcCCCeEEeCCH-HHHCCCCEEEEcC
Confidence 479999995 6655555544444344 7777765331 2222233333 222467888887 8899999999874
No 135
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=89.29 E-value=1.9 Score=36.77 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=81.1
Q ss_pred ccCCChhhHHHHHHHHHhcCCeE--EEeCCCCcCCCCCCCHHHHHHH----Hhhh-ccEEEEeeCCcchHHHHhhhCCCc
Q 024871 5 FAKPSMRTRVSFETGFSLLGGHA--IYLGPDDIQMGKREETRDAARV----LCRY-NDIIMARVFGHQDILDLAKFATVP 77 (261)
Q Consensus 5 F~~~StRTR~SFe~A~~~LGg~~--~~l~~~~s~~~kgEs~~Dt~~~----ls~~-~D~iv~R~~~~~~~~~~a~~~~vP 77 (261)
|-=|..|-+--|+..+..++... ..++. ++++.... +..- +|+|+-|. +....+.++.++|
T Consensus 17 ~i~~~~~L~~~~~~i~~e~~~~~~I~vi~~---------~le~av~~a~~~~~~~~~dVIISRG---gta~~Lr~~~~iP 84 (225)
T 2pju_A 17 WTVSVTRLFELFRDISLEFDHLANITPIQL---------GFEKAVTYIRKKLANERCDAIIAAG---SNGAYLKSRLSVP 84 (225)
T ss_dssp EEECCHHHHHHHHHHHTTTTTTCEEEEECC---------CHHHHHHHHHHHTTTSCCSEEEEEH---HHHHHHHTTCSSC
T ss_pred EEEchHHHHHHHHHHHHhhCCCceEEEecC---------cHHHHHHHHHHHHhcCCCeEEEeCC---hHHHHHHhhCCCC
Confidence 44455666667787888877642 22221 23333332 3333 79999994 3455566778999
Q ss_pred EEeCCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 78 VINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 78 VINa~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
||.---+. -|++......... +.||++||- .|+...+-..+..+|+++.+......+--+..++.+++.|.
T Consensus 85 VV~I~vs~-------~Dil~aL~~a~~~-~~kIavVg~-~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~ 155 (225)
T 2pju_A 85 VILIKPSG-------YDVLQFLAKAGKL-TSSIGVVTY-QETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGT 155 (225)
T ss_dssp EEEECCCH-------HHHHHHHHHTTCT-TSCEEEEEE-SSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred EEEecCCH-------HHHHHHHHHHHhh-CCcEEEEeC-chhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCC
Confidence 99964322 4766666555543 459999996 45566666667777877666543332222344556666663
Q ss_pred CeEEEE
Q 024871 158 SKIEIT 163 (261)
Q Consensus 158 ~~i~~~ 163 (261)
.+.+-
T Consensus 156 -~vVVG 160 (225)
T 2pju_A 156 -EAVVG 160 (225)
T ss_dssp -CEEEE
T ss_pred -CEEEC
Confidence 34443
No 136
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.24 E-value=1.5 Score=37.57 Aligned_cols=65 Identities=20% Similarity=0.075 Sum_probs=48.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...|.+++++.+ +++..+.+++.|.. ...+.|++++ +++|+|+.-.
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-----~~~~~~~~~~~g~~-~~~~~~~~~~-~~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSR-----QQSTCEKAVERQLV-DEAGQDLSLL-QTAKIIFLCT 65 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTSC-SEEESCGGGG-TTCSEEEECS
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHHhCCCC-ccccCCHHHh-CCCCEEEEEC
Confidence 3799999 688999999888888888877654 34445556666632 2357788888 9999999864
No 137
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.05 E-value=0.48 Score=40.37 Aligned_cols=70 Identities=10% Similarity=0.103 Sum_probs=46.6
Q ss_pred hCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHH--------------HHH-HHHhCCCeEEEEcCH
Q 024871 102 VGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKET--------------VEK-ARKAGISKIEITNDP 166 (261)
Q Consensus 102 ~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~--------------~~~-~~~~g~~~i~~~~d~ 166 (261)
..++.++||+++| .+++..+++..+...|.++++.... ++. .+. +.+.|. + ...++
T Consensus 14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 84 (245)
T 3dtt_A 14 NLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRD-----PKATLARAEPDAMGAPPFSQWLPEHPH--V-HLAAF 84 (245)
T ss_dssp -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHTCC-------CCHHHHGGGSTT--C-EEEEH
T ss_pred ccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----hhhhhhhhhhhhhcchhhhHHHhhcCc--e-eccCH
Confidence 3468899999999 5889999998888889888876542 221 111 222332 2 35678
Q ss_pred HHHhCCCCEEEEec
Q 024871 167 KEVVQGADVVYSDV 180 (261)
Q Consensus 167 ~~a~~~aDviy~~~ 180 (261)
+++++++|+|+.-.
T Consensus 85 ~e~~~~aDvVilav 98 (245)
T 3dtt_A 85 ADVAAGAELVVNAT 98 (245)
T ss_dssp HHHHHHCSEEEECS
T ss_pred HHHHhcCCEEEEcc
Confidence 99999999999864
No 138
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=88.98 E-value=2.6 Score=35.21 Aligned_cols=99 Identities=12% Similarity=0.230 Sum_probs=60.6
Q ss_pred hHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHH-H----HhCC----------CeEEEEcCHHHHhCCCC-------E
Q 024871 119 IVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKA-R----KAGI----------SKIEITNDPKEVVQGAD-------V 175 (261)
Q Consensus 119 v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~-~----~~g~----------~~i~~~~d~~~a~~~aD-------v 175 (261)
=+|+.+.++..||+ +++++.|...+ .+..... . ..|. ...++.++++||+++++ .
T Consensus 30 dihdiARamkt~Gl~~l~LV~P~~~~--~~~a~~~~~~w~~~~Ga~~np~r~d~L~~a~vv~sL~eAl~~~~~~~g~~p~ 107 (192)
T 3dcm_X 30 DVHDIARTARTYNLKGYYIVTNLRAQ--QDMVSKMLKFWREGFGSRYNPSRAESLKLVKLKSYLEDVLEDIESVEGERPL 107 (192)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCHHH--HHHHHHHHHHHHTSGGGGTCSSSHHHHTTEEEESSHHHHHHHHHHHHSSCCE
T ss_pred cHHHHHHHHHhcCCceEEEECCcccc--HHHHHHHHHhhhcccCcccCcCHHHHhccCeEECCHHHHHHHHHhhcCCccE
Confidence 38999999999996 89999997421 1111111 0 1121 46788999999999999 5
Q ss_pred EEEec----ccCcchhHHHHHHH-hh-------h-cCCcccHHHHHhcCCCcEEeeCCCCC
Q 024871 176 VYSDV----WASMGQKEEAAYRK-QA-------F-QGFQVDEFLMKLAGPKAYFMHCLPAE 223 (261)
Q Consensus 176 iy~~~----w~~~~~~~~~~~~~-~~-------~-~~y~v~~~~~~~a~~~~~~mH~lP~~ 223 (261)
++.++ |.... .++..++. +. | ..|+++.|.|+.+. .++-|.|.+
T Consensus 108 vvaTsAr~~~~~i~-~~el~~~i~~~~~pvalvFG~~~GLtneel~~cd---~~l~~Ip~~ 164 (192)
T 3dcm_X 108 IFFTSAKKRENDIS-FEEGRRIIIETEKPVLILLGTGWGLPDEILEISD---YVLEPIRAQ 164 (192)
T ss_dssp EEECCSSCCSSCBC-HHHHHHHHHHCCSCEEEEECCTTCCCHHHHTTCS---EEBCCTTTT
T ss_pred EEEeCCCcCCCCCC-HHHHHHHHHhCCCCEEEEECCCCCCCHHHHHhcC---EEEccCCCC
Confidence 55543 22222 22221222 11 1 25889999988774 455577764
No 139
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=88.92 E-value=0.62 Score=44.42 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=47.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHH-hcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHH---HhC--CCCEE
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMA-SVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKE---VVQ--GADVV 176 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~-~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~---a~~--~aDvi 176 (261)
..+.|+|+++.||. --+.|++..+ .-+|++++.++-..-...+...+.+++.+ ..+.+.+|+.+ .++ +.|++
T Consensus 299 ~~l~Gkrv~i~gd~-~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~-~~v~~~~D~~el~~~i~~~~pDl~ 376 (511)
T 2xdq_B 299 QNLTGKKAVVFGDN-THAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFC-DEVLITDDHTVVGDAIARVEPAAI 376 (511)
T ss_dssp HTTTTCEEEEEECH-HHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTS-SEEEECCCHHHHHHHHHHHCCSEE
T ss_pred HhccCCEEEEEcCC-hHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcC-CcEEEeCCHHHHHHHHHhcCCCEE
Confidence 35899999999984 3467777777 67899987654332222233333344444 35667777643 333 67988
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 377 ig~~ 380 (511)
T 2xdq_B 377 FGTQ 380 (511)
T ss_dssp EECH
T ss_pred Eecc
Confidence 8864
No 140
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.91 E-value=1.2 Score=40.01 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHH---HHhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKA---RKAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~---~~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|. +.+..+++..++.-|. ++++...+.-.......+.. ...+ ..++..+.|+++++++||+|+...
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 469999996 8888888877776675 77776543311111111111 1112 246778899999999999999864
No 141
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.88 E-value=1.4 Score=39.01 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=49.7
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhc-CCc-EEEEeCCCCCCCCHHHHHHH-HHhCCCeEEEEcCHHHHhCCCCEEE
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASV-IPF-HFVCACPKGFEPDKETVEKA-RKAGISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~-~g~-~~~~~~P~~~~~~~~~~~~~-~~~g~~~i~~~~d~~~a~~~aDviy 177 (261)
++...++++|+++|- +++..+++..+.. +|. ++.+..+ .++-.+.+ ++.+. .+...++++++++++|+|+
T Consensus 129 ~la~~~~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr-----~~~~~~~l~~~~~~-~~~~~~~~~e~v~~aDiVi 201 (312)
T 2i99_A 129 FLKPPSSEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNR-----TKENAEKFADTVQG-EVRVCSSVQEAVAGADVII 201 (312)
T ss_dssp HHSCTTCCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECS-----SHHHHHHHHHHSSS-CCEECSSHHHHHTTCSEEE
T ss_pred HhCCCCCcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcC-----CHHHHHHHHHHhhC-CeEEeCCHHHHHhcCCEEE
Confidence 456678899999995 7777777766544 476 6766644 33333333 33341 3566789999999999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
+-.
T Consensus 202 ~at 204 (312)
T 2i99_A 202 TVT 204 (312)
T ss_dssp ECC
T ss_pred EEe
Confidence 864
No 142
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=88.80 E-value=2 Score=41.26 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=27.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.+.|+|+++.||.. -+++++..+.-+|++++.++
T Consensus 332 ~l~GKrv~i~~~~~-~~~~l~~~l~ElGm~vv~~~ 365 (533)
T 1mio_A 332 KLQGKTACLYVGGS-RSHTYMNMLKSFGVDSLVAG 365 (533)
T ss_dssp HHTTCEEEEEESSS-HHHHHHHHHHHHTCEEEEEE
T ss_pred HhCCCEEEEECCch-HHHHHHHHHHHCCCEEEEEE
Confidence 47899999999864 56777777778899988764
No 143
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=88.79 E-value=2 Score=38.48 Aligned_cols=99 Identities=21% Similarity=0.241 Sum_probs=60.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCC-----CC-CCHHHHHHHHHhCCCeEEEEcCH---H--HHh--CC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKG-----FE-PDKETVEKARKAGISKIEITNDP---K--EVV--QG 172 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~-----~~-~~~~~~~~~~~~g~~~i~~~~d~---~--~a~--~~ 172 (261)
+||+|+|-..--+.++-.+... |.++ ++..|+. .. .+..+.+.|+++|+. +....++ + +.+ .+
T Consensus 5 mrIvf~Gtp~fa~~~L~~L~~~-~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIp-v~~~~~~~~~~~~~~l~~~~ 82 (317)
T 3rfo_A 5 IKVVFMGTPDFSVPVLRRLIED-GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIP-VLQPLRIREKDEYEKVLALE 82 (317)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCC-EECCSCTTSHHHHHHHHHHC
T ss_pred eEEEEEeCCHHHHHHHHHHHHC-CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCC-EEccccCCCHHHHHHHHhcC
Confidence 7999999876656666444432 4443 3444532 11 123466778888864 3222222 1 112 35
Q ss_pred CCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 173 ADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 173 aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.|+|+.-.| ...|.+++++..+-.++-+|| ||.+||
T Consensus 83 ~Dliv~~~y-----------------~~ilp~~~l~~~~~g~iNiHpSlLP~yRG 120 (317)
T 3rfo_A 83 PDLIVTAAF-----------------GQIVPNEILEAPKYGCINVHASLLPELRG 120 (317)
T ss_dssp CSEEEESSC-----------------CSCCCHHHHHSSTTCEEEEESSCTTSSBS
T ss_pred CCEEEEcCc-----------------hhhCCHHHHhhCcCCEEEECCccCcCCCC
Confidence 677777643 235788888887778999999 899885
No 144
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.78 E-value=1.1 Score=38.78 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=48.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++...++..+...|.++++..+ +++..+.+++.| +..+.+++++++++|+|+.-.
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-----~~~~~~~~~~~g---~~~~~~~~~~~~~~D~vi~~v 69 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-----NPEAIADVIAAG---AETASTAKAIAEQCDVIITML 69 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTT---CEECSSHHHHHHHCSEEEECC
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHHCC---CeecCCHHHHHhCCCEEEEEC
Confidence 5899999 588888888877777888876644 344445555555 356788999999999999864
No 145
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.75 E-value=0.43 Score=42.21 Aligned_cols=64 Identities=14% Similarity=0.232 Sum_probs=43.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+||| .+++...++.-+.+-|.++++.- ..++..+.+.+.| ....+++.|+++++|+|++-.
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~d-----r~~~~~~~l~~~G---~~~~~s~~e~~~~~dvvi~~l 69 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWN-----RTASKAEPLTKLG---ATVVENAIDAITPGGIVFSVL 69 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC------------CTTTTTT---CEECSSGGGGCCTTCEEEECC
T ss_pred CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEe-----CCHHHHHHHHHcC---CeEeCCHHHHHhcCCceeeec
Confidence 5899999 57777777777777788877543 2222222233445 356889999999999999864
No 146
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.44 E-value=1.4 Score=41.27 Aligned_cols=67 Identities=13% Similarity=0.229 Sum_probs=48.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh-----------------CCCeEEEEcCHHHHh
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA-----------------GISKIEITNDPKEVV 170 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~-----------------g~~~i~~~~d~~~a~ 170 (261)
.||+++|- +++..+++..++..|.++++... +++.++.+++. ..+.+..+.|+++++
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~-----~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~ 76 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDT-----DRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV 76 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHG
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEEC-----CHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHH
Confidence 58999994 88998998888888988886653 33333333320 013578899999999
Q ss_pred CCCCEEEEec
Q 024871 171 QGADVVYSDV 180 (261)
Q Consensus 171 ~~aDviy~~~ 180 (261)
++||+|+.-.
T Consensus 77 ~~aDvViiaV 86 (450)
T 3gg2_A 77 PEADIIFIAV 86 (450)
T ss_dssp GGCSEEEECC
T ss_pred hcCCEEEEEc
Confidence 9999998754
No 147
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.42 E-value=1.1 Score=38.82 Aligned_cols=65 Identities=9% Similarity=0.151 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+||+++| .+++...++..+...|.+++++.+ +++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-----~~~~~~~~~~~g---~~~~~~~~~~~~~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDL-----MEANVAAVVAQG---AQACENNQKVAAASDIIFTSL 68 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECS-----SHHHHHHHHTTT---CEECSSHHHHHHHCSEEEECC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-----CHHHHHHHHHCC---CeecCCHHHHHhCCCEEEEEC
Confidence 36899999 578888888877777888876644 344444444444 356788999999999999864
No 148
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.35 E-value=1.9 Score=39.09 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=64.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hCCCeEEE----EcCHHHHhCCCCEEEE
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AGISKIEI----TNDPKEVVQGADVVYS 178 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~~----~~d~~~a~~~aDviy~ 178 (261)
.+.+++|+++|- +++....+..+..+|++++.+.+. ++-.+.+++ .| ..+.. .++++++++++|+|+.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~-----~~~~~~~~~~~g-~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVN-----HKRLQYLDDVFG-GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTT-TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHhcC-ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 378899999997 899999999999999998877543 333444544 44 33321 2346678899999988
Q ss_pred ecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC
Q 024871 179 DVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC 219 (261)
Q Consensus 179 ~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~ 219 (261)
.. +.... ..++.++++.++..++..++.-.
T Consensus 236 ~~----g~~~~-------~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 236 AV----LVPGA-------KAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp CC----C--------------CCSCHHHHTTSCTTCEEEEC
T ss_pred CC----CCCcc-------ccchhHHHHHHHhhcCCCEEEEE
Confidence 64 21110 12355677887777776665543
No 149
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.27 E-value=0.65 Score=41.85 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=43.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARKAGI--SKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~g~--~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+..||+++|- +++..+++..+...|. ++++.-...-......++....... ..+.++.+..+++++||+|+...
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICA 81 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEec
Confidence 3579999994 8888888877766565 7777654210011111111111110 13344444467999999988864
No 150
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.25 E-value=1.6 Score=39.93 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=48.7
Q ss_pred hC--CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHH-HHHHHHhCCCeEEEEcCHHHHhC-CCCEEE
Q 024871 102 VG--RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKET-VEKARKAGISKIEITNDPKEVVQ-GADVVY 177 (261)
Q Consensus 102 ~g--~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~-~~~~~~~g~~~i~~~~d~~~a~~-~aDviy 177 (261)
+| +++|++|+++|- +||....+..+..+|++++++-+ +++- .+.+++.|. +.. +.++.+. ++||+.
T Consensus 166 ~G~~~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~-----~~~~l~~~a~~~ga---~~v-~~~~ll~~~~DIvi 235 (364)
T 1leh_A 166 FGSDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDV-----NKAAVSAAVAEEGA---DAV-APNAIYGVTCDIFA 235 (364)
T ss_dssp HSSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHHHCC---EEC-CGGGTTTCCCSEEE
T ss_pred ccccCCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcC-----CHHHHHHHHHHcCC---EEE-ChHHHhccCCcEee
Confidence 57 699999999995 88999999999999999886543 3332 234555562 222 4455554 899998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
.-.
T Consensus 236 p~a 238 (364)
T 1leh_A 236 PCA 238 (364)
T ss_dssp ECS
T ss_pred ccc
Confidence 754
No 151
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=88.24 E-value=4.3 Score=38.77 Aligned_cols=164 Identities=9% Similarity=0.029 Sum_probs=92.7
Q ss_pred HHHHHHHhcCCeEEEeCC-CC----------cCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCC
Q 024871 15 SFETGFSLLGGHAIYLGP-DD----------IQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT 83 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~~-~~----------s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~ 83 (261)
....=...+|..++.+.. +. +.+..|-+++|..+.-++-+.+++-+.......+.+.+.-++|.|.+..
T Consensus 235 eik~lL~~~Gi~v~~lpd~s~~ld~~~~~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~~A~~Le~r~GiP~i~~~~ 314 (519)
T 1qgu_B 235 VLKRMMEQMAVPCSLLSDPSEVLDTPADGHYRMYSGGTTQQEMKEAPDAIDTLLLQPWQLLKSKKVVQEMWNQPATEVAI 314 (519)
T ss_dssp HHHHHHHHHTCCEEESSCTTTTTSCCCSSCCCSCCCCBCHHHHHHGGGEEEEEESSTTTCHHHHHHHHHTSCCCCCCCCC
T ss_pred HHHHHHHHcCCeEEEecCccccccCcccCcccccCCCCCHHHHHhhhcCCEEEEECHHHHHHHHHHHHHHcCCCeEecCC
Confidence 344456789999986532 11 3445678999998876666666665544455667888888999887532
Q ss_pred C-CCChh----HHHHHHHH------H-----------HHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC
Q 024871 84 D-YNHPC----QIMADALT------I-----------IEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG 141 (261)
Q Consensus 84 ~-~~HPt----Q~L~Dl~T------i-----------~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~ 141 (261)
. +-..| +.|+.++- + ......+.|+|+++.|| ...+.|++..+.-+|++++.++-..
T Consensus 315 PiG~~~T~~~L~~la~~~g~~~~~~i~~er~~~~~~l~d~~~~l~Gkrv~i~gd-~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 315 PLGLAATDELLMTVSQLSGKPIADALTLERGRLVDMMLDSHTWLHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp CBSHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CcchHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC-chHHHHHHHHHHHCCCEEEEEEeCC
Confidence 0 00101 11111110 0 01112368999999998 3456677777778999876443322
Q ss_pred CCCCHHHHH----HHHHh--C-CCeEEEEcCHHH---HhC--CCCEEEEecc
Q 024871 142 FEPDKETVE----KARKA--G-ISKIEITNDPKE---VVQ--GADVVYSDVW 181 (261)
Q Consensus 142 ~~~~~~~~~----~~~~~--g-~~~i~~~~d~~~---a~~--~aDviy~~~w 181 (261)
. +++..+ .+++. | ...+....|..+ .++ +.|+++...+
T Consensus 394 ~--~~~~~~~~~~ll~~~~~~~~~~v~~~~d~~~l~~~i~~~~pDLiig~~~ 443 (519)
T 1qgu_B 394 A--NKRWQKAMNKMLDASPYGRDSEVFINCDLWHFRSLMFTRQPDFMIGNSY 443 (519)
T ss_dssp C--CHHHHHHHHHHHHHSTTCTTCEEEESCCHHHHHHHHHHHCCSEEEECGG
T ss_pred C--CHHHHHHHHHHHHhcCCCCCCEEEECCCHHHHHHHHhhcCCCEEEECcc
Confidence 2 332222 23333 2 134444446543 343 5899998753
No 152
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.15 E-value=0.4 Score=41.63 Aligned_cols=64 Identities=13% Similarity=0.082 Sum_probs=47.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+||+++| .+++..+++..+...|.++++..+. ++..+.+.+.| +..+++++++++++|+|+.-.
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~~g---~~~~~~~~~~~~~advvi~~v 65 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRN-----PAKCAPLVALG---ARQASSPAEVCAACDITIAML 65 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSS-----GGGGHHHHHHT---CEECSCHHHHHHHCSEEEECC
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHCC---CeecCCHHHHHHcCCEEEEEc
Confidence 4799999 5888888888877778888776543 23334455555 356789999999999999864
No 153
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.15 E-value=0.49 Score=44.61 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=53.1
Q ss_pred HHHhCCCCCcEEEEEcCC-----Cch----HHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEcCHHH
Q 024871 99 IEHVGRLEGTKVVYVGDG-----NNI----VHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR-KAGISKIEITNDPKE 168 (261)
Q Consensus 99 ~e~~g~l~~~~i~~vGd~-----~~v----~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d~~~ 168 (261)
.+.++.++|+||++.|=. ..+ +..++..+...|.++.+.-|.- .+.++ ..| ..+...+|+++
T Consensus 325 ~~~~~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~-------~~~~~~~~~-~~~~~~~~~~~ 396 (444)
T 3vtf_A 325 EERLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMA-------MEKARAVLG-DSVTYVEDPQA 396 (444)
T ss_dssp HHHHTCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSST-------HHHHHHHHG-GGSEECSCHHH
T ss_pred HHHccccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCC-------ChHHHHhcC-CCceecCCHHH
Confidence 455678999999999932 123 4446677778899999888843 12222 234 35778899999
Q ss_pred HhCCCCEEEE-eccc
Q 024871 169 VVQGADVVYS-DVWA 182 (261)
Q Consensus 169 a~~~aDviy~-~~w~ 182 (261)
++++||+|.. +.|.
T Consensus 397 a~~~aDavvi~t~h~ 411 (444)
T 3vtf_A 397 LLDQVEGVIIATAWP 411 (444)
T ss_dssp HHHHCSEEEECSCCG
T ss_pred HHhCCCEEEEccCCH
Confidence 9999997665 5574
No 154
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.15 E-value=0.69 Score=41.72 Aligned_cols=70 Identities=19% Similarity=0.157 Sum_probs=44.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-HHHH--hCC---CeEEEEcCHHHHhCCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-KARK--AGI---SKIEITNDPKEVVQGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~~~~--~g~---~~i~~~~d~~~a~~~aDvi 176 (261)
-.+.||+++|- ++|..+++..+..-|. ++++.-. .++..+ .+.+ .+. ..+.++.+..+++++||+|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-----~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiV 80 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-----FKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-----CHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-----ChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEE
Confidence 45689999994 8899888877766554 7777654 222221 1111 110 2345556667899999998
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 81 vi~a 84 (326)
T 3vku_A 81 VITA 84 (326)
T ss_dssp EECC
T ss_pred EECC
Confidence 8864
No 155
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.13 E-value=1.1 Score=39.81 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=49.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh----CCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA----GISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~----g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.-+||+++|- +.+..+++..++ -|.++++.- ..++.++.+.+. ..+.+..++|+++ +++||+|+.-.
T Consensus 11 ~~~~V~vIG~-G~MG~~iA~~la-aG~~V~v~d-----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieav 81 (293)
T 1zej_A 11 HHMKVFVIGA-GLMGRGIAIAIA-SKHEVVLQD-----VSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAV 81 (293)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHH-TTSEEEEEC-----SCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECC
T ss_pred CCCeEEEEee-CHHHHHHHHHHH-cCCEEEEEE-----CCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcC
Confidence 3589999994 788999988888 899988664 345555655554 0014677888876 99999999964
No 156
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.04 E-value=1.7 Score=38.78 Aligned_cols=72 Identities=13% Similarity=0.046 Sum_probs=43.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH--hCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK--AGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~--~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- ++|..+++..+..-|. ++++.--+.-.......+.... .. ..++++.+..+++++||+|+...
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~-~~~~i~~~~~~a~~~aDvVii~~ 82 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM-GQMSLYAGDYSDVKDCDVIVVTA 82 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT-TCEEEC--CGGGGTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhc-CCeEEEECCHHHhCCCCEEEEcC
Confidence 479999996 8888888877766665 7887765432233223222111 11 23444434478899999999874
No 157
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.89 E-value=0.71 Score=39.15 Aligned_cols=64 Identities=19% Similarity=0.339 Sum_probs=48.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc----EEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF----HFVCACPKGFEPDKETVEKAR-KAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~----~~~~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+||+++| .+++..+++..+..-|. ++++..+ .++..+.+. +.| +..+.|.+++++++|+|+.-.
T Consensus 3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r-----~~~~~~~~~~~~g---~~~~~~~~e~~~~aDvVilav 71 (247)
T 3gt0_A 3 KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDL-----NTANLKNASEKYG---LTTTTDNNEVAKNADILILSI 71 (247)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECS-----CHHHHHHHHHHHC---CEECSCHHHHHHHCSEEEECS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeC-----CHHHHHHHHHHhC---CEEeCChHHHHHhCCEEEEEe
Confidence 5899999 58899999888877776 7776654 344444443 456 356789999999999999865
No 158
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.85 E-value=0.83 Score=42.08 Aligned_cols=74 Identities=20% Similarity=0.162 Sum_probs=53.2
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
.++.+.|++|+++|- +.+....+..+..+|+ +++++.+.. +...+.+++.|. ...-.+++++.++++|+|+..
T Consensus 161 ~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~----~ra~~la~~~g~-~~~~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY----ERAVELARDLGG-EAVRFDELVDHLARSDVVVSA 234 (404)
T ss_dssp HHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH----HHHHHHHHHHTC-EECCGGGHHHHHHTCSEEEEC
T ss_pred HhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHcCC-ceecHHhHHHHhcCCCEEEEc
Confidence 356789999999996 8899998888888898 888876531 111234556663 221135778889999999987
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 235 t 235 (404)
T 1gpj_A 235 T 235 (404)
T ss_dssp C
T ss_pred c
Confidence 4
No 159
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=87.82 E-value=1.7 Score=36.82 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=55.7
Q ss_pred CcEEEEE--cCCCchHHHHHHHHhc-CCcEEE--EeCCCCCCCCHHHHHHHHHhCCCeEEEEc-----------CHHHHh
Q 024871 107 GTKVVYV--GDGNNIVHSWLLMASV-IPFHFV--CACPKGFEPDKETVEKARKAGISKIEITN-----------DPKEVV 170 (261)
Q Consensus 107 ~~~i~~v--Gd~~~v~~S~~~~~~~-~g~~~~--~~~P~~~~~~~~~~~~~~~~g~~~i~~~~-----------d~~~a~ 170 (261)
.+||++. |-+. .+..++..... ++.+++ +.-|+ ...++.|+++|+..+.... .+.+.+
T Consensus 12 ~~ri~vl~SG~gs-nl~all~~~~~~~~~eI~~Vis~~~-----a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 85 (215)
T 3da8_A 12 PARLVVLASGTGS-LLRSLLDAAVGDYPARVVAVGVDRE-----CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAAT 85 (215)
T ss_dssp SEEEEEEESSCCH-HHHHHHHHSSTTCSEEEEEEEESSC-----CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CcEEEEEEeCChH-HHHHHHHHHhccCCCeEEEEEeCCc-----hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH
Confidence 3578877 4433 33444444322 444543 22232 2346678888865444311 011222
Q ss_pred --CCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 171 --QGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 171 --~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.+.|+|..-.|. ..+.+++++..+..++=+|| ||.+||
T Consensus 86 ~~~~~Dlivlagy~-----------------~iL~~~~l~~~~~~~iNiHpSLLP~yrG 127 (215)
T 3da8_A 86 AAHEPDLVVSAGFM-----------------RILGPQFLSRFYGRTLNTHPALLPAFPG 127 (215)
T ss_dssp HTTCCSEEEEEECC-----------------SCCCHHHHHHHTTTEEEEESSCTTSSCS
T ss_pred HhhCCCEEEEcCch-----------------hhCCHHHHhhccCCeEEeCcccccCCCC
Confidence 356777776542 34788888888878999999 899886
No 160
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.80 E-value=1.9 Score=39.94 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=48.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC-----------------CCeEEEEcCHHHHh
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG-----------------ISKIEITNDPKEVV 170 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g-----------------~~~i~~~~d~~~a~ 170 (261)
.||+++| .+++..+++..++..|.+++++.. +++.++.+++.+ .+.+..+.|+++++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~-----~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~ 74 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV-----SSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAV 74 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHh
Confidence 3799999 588999998888888988877643 233333333210 12578899999999
Q ss_pred CCCCEEEEec
Q 024871 171 QGADVVYSDV 180 (261)
Q Consensus 171 ~~aDviy~~~ 180 (261)
+++|+|+...
T Consensus 75 ~~aDvviiaV 84 (436)
T 1mv8_A 75 LDSDVSFICV 84 (436)
T ss_dssp HTCSEEEECC
T ss_pred ccCCEEEEEc
Confidence 9999998764
No 161
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.74 E-value=2.2 Score=39.95 Aligned_cols=72 Identities=6% Similarity=-0.025 Sum_probs=49.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+++|++|++||. +.++.+.+..+...|.++++++|+ ..+++.+..++.+. .+....-.++-++++|.|+.-+
T Consensus 9 ~l~~~~vlVvGg-G~va~~k~~~L~~~ga~V~vi~~~---~~~~~~~l~~~~~i-~~~~~~~~~~~l~~~~lVi~at 80 (457)
T 1pjq_A 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALT---FIPQFTVWANEGML-TLVEGPFDETLLDSCWLAIAAT 80 (457)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESS---CCHHHHHHHTTTSC-EEEESSCCGGGGTTCSEEEECC
T ss_pred ECCCCEEEEECC-CHHHHHHHHHHHhCcCEEEEEcCC---CCHHHHHHHhcCCE-EEEECCCCccccCCccEEEEcC
Confidence 588999999995 789999999999999999999985 33444333222222 2222221244588999999864
No 162
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.73 E-value=1.2 Score=38.52 Aligned_cols=67 Identities=24% Similarity=0.109 Sum_probs=47.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||++|| .+++..+++..+... |.++++..+ +++..+.+++.|.. ...+.|++++++++|+|+.-.
T Consensus 6 ~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~-----~~~~~~~~~~~g~~-~~~~~~~~~~~~~aDvVilav 74 (290)
T 3b1f_A 6 EKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNR-----SDRSRDIALERGIV-DEATADFKVFAALADVIILAV 74 (290)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECS-----SHHHHHHHHHTTSC-SEEESCTTTTGGGCSEEEECS
T ss_pred cceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcC-----CHHHHHHHHHcCCc-ccccCCHHHhhcCCCEEEEcC
Confidence 46899999 688888888776654 677776544 34555556666631 145678888999999999864
No 163
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=87.72 E-value=5.6 Score=38.07 Aligned_cols=163 Identities=11% Similarity=0.021 Sum_probs=90.5
Q ss_pred HHHHHHhcCCeEEEeC-CCC----------cCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCC-
Q 024871 16 FETGFSLLGGHAIYLG-PDD----------IQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT- 83 (261)
Q Consensus 16 Fe~A~~~LGg~~~~l~-~~~----------s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~- 83 (261)
...=...+|..++.+. .+. ..+..|-|++|..+.=.+-+.+++-+.......+.+.+.-++|.+....
T Consensus 240 lkrlL~~~Gi~v~~lpd~s~~ld~p~~~~~~~~~ggtt~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~~P 319 (523)
T 3u7q_B 240 IKRMLSEMGVGYSLLSDPEEVLDTPADGQFRMYAGGTTQEEMKDAPNALNTVLLQPWHLEKTKKFVEGTWKHEVPKLNIP 319 (523)
T ss_dssp HHHHHHHTTCCEEESSCCTTTTSCCCSSCCCSCCCCBCHHHHHHGGGSSEEEESSGGGCHHHHHHHHHTSCCCCCCCCCS
T ss_pred HHHHHHHcCCeEEEecCchhcccccccccccccCCCCCHHHHHHhhcCcEEEEEccchHHHHHHHHHHHhCCCeeecCCc
Confidence 3445678999998763 221 1234678999988876666666554434455667777778889876321
Q ss_pred CCCChh----HHHHHHH------HHHH-----------HhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCC
Q 024871 84 DYNHPC----QIMADAL------TIIE-----------HVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGF 142 (261)
Q Consensus 84 ~~~HPt----Q~L~Dl~------Ti~e-----------~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~ 142 (261)
-+-.-| +.|+.++ .+.+ ....+.|+|+++.||. --+.|++..+.-+|++++.+.-...
T Consensus 320 iG~~~T~~~l~~la~~~g~~~~~~i~~er~r~~~~l~d~~~~l~GKrvaI~gd~-~~~~~la~fL~elGm~vv~v~~~~~ 398 (523)
T 3u7q_B 320 MGLDWTDEFLMKVSEISGQPIPASLTKERGRLVDMMTDSHTWLHGKRFALWGDP-DFVMGLVKFLLELGCEPVHILCHNG 398 (523)
T ss_dssp CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSH-HHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCHHHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCc-hHHHHHHHHHHHcCCEEEEEEeCCC
Confidence 001111 2222222 0111 1123789999999983 3456677777779998776542221
Q ss_pred CCCHHHH----HHHHH--hCC-CeEEEEcCHHH---Hh--CCCCEEEEecc
Q 024871 143 EPDKETV----EKARK--AGI-SKIEITNDPKE---VV--QGADVVYSDVW 181 (261)
Q Consensus 143 ~~~~~~~----~~~~~--~g~-~~i~~~~d~~~---a~--~~aDviy~~~w 181 (261)
+++.. +.+++ .|. ..+....|..+ .+ .+.|+|+...|
T Consensus 399 --~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~ 447 (523)
T 3u7q_B 399 --NKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSY 447 (523)
T ss_dssp --CHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTT
T ss_pred --CHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECcc
Confidence 22222 22222 121 23444445543 33 36899999764
No 164
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.70 E-value=2.3 Score=38.54 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC-----------CeEEEEcCHHHHhCCCCE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI-----------SKIEITNDPKEVVQGADV 175 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~-----------~~i~~~~d~~~a~~~aDv 175 (261)
..||+++|- +++..+++..++.-|.++++... +++..+.+++.+. ..+..+.|++++++++|+
T Consensus 29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r-----~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSY-----ESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECS-----CHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeC-----CHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 478999995 88888998888888888877654 3444555554431 136788999999999999
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
|+.-.
T Consensus 103 VilaV 107 (356)
T 3k96_A 103 ILIVV 107 (356)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99864
No 165
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.67 E-value=1.1 Score=38.12 Aligned_cols=64 Identities=9% Similarity=0.199 Sum_probs=47.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR-KAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...|.++.++.+ +++..+.+. +.|. ..+.|++++++++|+|+.-.
T Consensus 4 m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~-----~~~~~~~~~~~~g~---~~~~~~~~~~~~~D~Vi~~v 68 (259)
T 2ahr_A 4 MKIGIIG-VGKMASAIIKGLKQTPHELIISGS-----SLERSKEIAEQLAL---PYAMSHQDLIDQVDLVILGI 68 (259)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-----SHHHHHHHHHHHTC---CBCSSHHHHHHTCSEEEECS
T ss_pred cEEEEEC-CCHHHHHHHHHHHhCCCeEEEECC-----CHHHHHHHHHHcCC---EeeCCHHHHHhcCCEEEEEe
Confidence 6899999 588999998888888877766654 334344333 3463 34678999999999999864
No 166
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.56 E-value=0.79 Score=39.61 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=46.9
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...|.++++..+. ++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~~~g---~~~~~~~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVF-----PDACKEFQDAG---EQVVSSPADVAEKADRIITML 64 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSS-----THHHHHHHTTT---CEECSSHHHHHHHCSEEEECC
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcC---CeecCCHHHHHhcCCEEEEeC
Confidence 3799999 5888888888877778888776542 33344444554 356788999999999999864
No 167
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=87.35 E-value=4.1 Score=38.66 Aligned_cols=69 Identities=19% Similarity=0.194 Sum_probs=42.5
Q ss_pred CcEEEEEcCCC-chHHHHHHHHhc---C-CcEEEEeCCCCCCCCHHHHHH----HH----HhC-CCeEEEEcCHHHHhCC
Q 024871 107 GTKVVYVGDGN-NIVHSWLLMASV---I-PFHFVCACPKGFEPDKETVEK----AR----KAG-ISKIEITNDPKEVVQG 172 (261)
Q Consensus 107 ~~~i~~vGd~~-~v~~S~~~~~~~---~-g~~~~~~~P~~~~~~~~~~~~----~~----~~g-~~~i~~~~d~~~a~~~ 172 (261)
..||+++|.++ .....++..++. + +-++++..-. ++.++. +. ..+ ..++..+.|+++++++
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~-----~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d 77 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID-----EERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID 77 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC-----HHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCC-----HHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC
Confidence 47999999754 223433333332 2 6688877543 332221 11 111 2468888999999999
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
||+|+...
T Consensus 78 AD~VIiaa 85 (480)
T 1obb_A 78 ADFVINTA 85 (480)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999874
No 168
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=86.88 E-value=1.4 Score=39.23 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=56.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCCC--C-CCHHHHHHHHHhCCCeEEEEcCH-----HHHh--CCCCE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKGF--E-PDKETVEKARKAGISKIEITNDP-----KEVV--QGADV 175 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~~--~-~~~~~~~~~~~~g~~~i~~~~d~-----~~a~--~~aDv 175 (261)
+||+|+|...--+.++-.+.. -+.++ ++..|+.- . .+..+.+.|+++|+. +...++. .+.+ .+.|+
T Consensus 1 mrivf~gt~~fa~~~L~~L~~-~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~l~~~~~Dl 78 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLA-AGYEISAIFTHTDNPGEKAFYGSVARLAAERGIP-VYAPDNVNHPLWVERIAQLSPDV 78 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-TTCEEEEEECCCC------CCCCHHHHHHHHTCC-EECCSCCCSHHHHHHHHHTCCSE
T ss_pred CEEEEEEcCHHHHHHHHHHHH-CCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCC-EECCCcCCcHHHHHHHHhcCCCE
Confidence 489999974323333332222 25444 34444321 0 112356778888864 3222221 1222 36788
Q ss_pred EEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 176 VYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 176 iy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
|..-.| ...|.+++++..+-.++-+|| ||.+||
T Consensus 79 iv~~~y-----------------~~ilp~~il~~~~~g~iNiHpSLLP~yRG 113 (305)
T 2bln_A 79 IFSFYY-----------------RHLIYDEILQLAPAGAFNLHGSLLPKYRG 113 (305)
T ss_dssp EEEESC-----------------CSCCCHHHHTTCTTCEEEEESSCTTTTEE
T ss_pred EEEecc-----------------ccccCHHHHhcCcCCEEEecCCcCcCCCC
Confidence 887654 234788888887778999999 799874
No 169
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=86.87 E-value=4.7 Score=33.82 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=28.8
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|..-.|. ..|.+++++..+..++-+|| ||.+||
T Consensus 79 ~~Dliv~a~y~-----------------~il~~~~l~~~~~~~iNiHpSLLP~yrG 117 (209)
T 1meo_A 79 SIDIVCLAGFM-----------------RILSGPFVQKWNGKMLNIHPSLLPSFKG 117 (209)
T ss_dssp TCCEEEEESCC-----------------SCCCHHHHHHTTTSEEEEESSSTTSSCS
T ss_pred CCCEEEEcchh-----------------hhCCHHHHhhhcCCEEEEccCcCcCCCC
Confidence 57888877542 35788888888778999999 799886
No 170
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=86.69 E-value=5.3 Score=37.75 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=41.4
Q ss_pred cEEEEEcCCC-chHHHHHHHHhc---C---CcEEEEeCCCCCCCCHHHHH--------HHHHhC-CCeEEEEcCHHHHhC
Q 024871 108 TKVVYVGDGN-NIVHSWLLMASV---I---PFHFVCACPKGFEPDKETVE--------KARKAG-ISKIEITNDPKEVVQ 171 (261)
Q Consensus 108 ~~i~~vGd~~-~v~~S~~~~~~~---~---g~~~~~~~P~~~~~~~~~~~--------~~~~~g-~~~i~~~~d~~~a~~ 171 (261)
.||++||.++ ...-.++..+.. + +.++++.-. +++.++ .++..| ..+++.+.|.++|++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di-----~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~ 75 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDV-----HERRLNASYILARKYVEELNSPVKVVKTESLDEAIE 75 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECS-----CHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHT
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECC-----CHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhC
Confidence 4899999764 233344433322 2 246776643 333222 122334 246888999999999
Q ss_pred CCCEEEEec
Q 024871 172 GADVVYSDV 180 (261)
Q Consensus 172 ~aDviy~~~ 180 (261)
+||+|++..
T Consensus 76 gAD~Vi~~~ 84 (477)
T 3u95_A 76 GADFIINTA 84 (477)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEECc
Confidence 999999873
No 171
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.53 E-value=3 Score=37.31 Aligned_cols=73 Identities=22% Similarity=0.203 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHH---HhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKAR---KAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~---~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+..||+++| .+++..+++..+..-|. ++++.-...-......++... -.+ ..++..+.| .+++++||+|+...
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTA 81 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcC
Confidence 457999999 58888888877766555 887775433111111112111 111 135555666 57999999988863
No 172
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.37 E-value=0.97 Score=37.66 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=45.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
++||+++| .+++..+++..+...|.+++++.+. ++..+.+.+.|. ..+ +.+++++++|+|+...
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~g~---~~~-~~~~~~~~~DvVi~av 91 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN-----PKRTARLFPSAA---QVT-FQEEAVSSPEVIFVAV 91 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS-----HHHHHHHSBTTS---EEE-EHHHHTTSCSEEEECS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcCC---cee-cHHHHHhCCCEEEECC
Confidence 47899999 6899999988888888887766542 333333333342 334 7888999999999864
No 173
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.08 E-value=1.6 Score=38.09 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=48.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHH-----------HHhCC---------------CeEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKA-----------RKAGI---------------SKIE 161 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~-----------~~~g~---------------~~i~ 161 (261)
+||+++|- +++..+++..++.-|.++++..+. ++.++.+ .+.|. ..+.
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~-----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQT-----EDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 58999995 889999988888889998877653 2322221 11221 1477
Q ss_pred EEcCHHHHhCCCCEEEEec
Q 024871 162 ITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 162 ~~~d~~~a~~~aDviy~~~ 180 (261)
.+.|+++++++||+|+.-.
T Consensus 90 ~~~~~~~~~~~aD~Vi~av 108 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAI 108 (302)
T ss_dssp EESCHHHHTTSCSEEEECC
T ss_pred EecCHHHhhcCCCEEEEcC
Confidence 8899999999999999865
No 174
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=85.99 E-value=3.8 Score=34.49 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=28.5
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|..-.|. ..+.+++++..+..++=+|| ||.+||
T Consensus 86 ~~Dliv~agy~-----------------~il~~~~l~~~~~~~iNiHpSLLP~yrG 124 (209)
T 4ds3_A 86 KPDIICLAGYM-----------------RLLSGRFIAPYEGRILNIHPSLLPLFPG 124 (209)
T ss_dssp CCSEEEESSCC-----------------SCCCHHHHGGGTTCEEEEESSCTTSSCS
T ss_pred CCCEEEEeccc-----------------cCcCHHHHhhccCCeEEECCccccCCCC
Confidence 57777776542 34788888888878999999 899885
No 175
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.98 E-value=1 Score=40.90 Aligned_cols=71 Identities=21% Similarity=0.193 Sum_probs=48.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-H---HHHh--CCCeEEEEcCHHHHhCCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-K---ARKA--GISKIEITNDPKEVVQGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~---~~~~--g~~~i~~~~d~~~a~~~aDvi 176 (261)
+.+.||+++|-.++|..+++..+...|. +++++-. .++.++ . +... ....+..+.|.++++++||+|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi-----~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvV 80 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP-----FAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYI 80 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS-----CHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC-----CchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEE
Confidence 5678999999878888888877766663 6766543 222211 1 1111 113577788999999999999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 81 vita 84 (343)
T 3fi9_A 81 VSSG 84 (343)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9864
No 176
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=85.96 E-value=0.95 Score=40.66 Aligned_cols=69 Identities=19% Similarity=0.153 Sum_probs=42.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-HHHH--hC---CCeEEEEcCHHHHhCCCCEEE
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-KARK--AG---ISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~~~~--~g---~~~i~~~~d~~~a~~~aDviy 177 (261)
+..||+++|- ++|..+++..+..-+. ++++.-- +++.++ .+.+ .+ ...+.++.+..+++++||+|+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di-----~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVi 81 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-----FKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVV 81 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-----CHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-----CchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEE
Confidence 4579999997 8888887766654443 6766643 222221 1111 11 023445556788999999998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 82 i~a 84 (326)
T 2zqz_A 82 ITA 84 (326)
T ss_dssp ECC
T ss_pred EcC
Confidence 874
No 177
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=85.79 E-value=4.7 Score=37.70 Aligned_cols=163 Identities=15% Similarity=0.091 Sum_probs=90.7
Q ss_pred HHHHHHHhcCCeEEEeC-CCC----------cCCC-CCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCC
Q 024871 15 SFETGFSLLGGHAIYLG-PDD----------IQMG-KREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGL 82 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~-~~~----------s~~~-kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~ 82 (261)
-...=...+|..++.+. .+. +.+. .|-+++|..+.-++-+.+++-+.......+.+.+.-++|.|...
T Consensus 186 eik~lL~~~Gi~v~~l~d~s~~ld~~~~~~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~~~~~ 265 (458)
T 1mio_B 186 EIKRLFEAMDIPYIMFPDTSGVLDGPTTGEYKMYPEGGTKIEDLKDTGNSDLTLSLGSYASDLGAKTLEKKCKVPFKTLR 265 (458)
T ss_dssp HHHHHHHHHTCCEEESSCCTTTSSCCCCSSCCSSCSCSBCHHHHHTTSSCSEEEEESHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHcCCcEEEeccccccccCcccCccceeCCCCCcHHHHHhhccCCEEEEEchhhHHHHHHHHHHHhCCCEEecC
Confidence 33444668999998753 221 2344 57788888886666666655332234566777778899988753
Q ss_pred CC-CCChh----HHHHHHH-----------------HHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCC
Q 024871 83 TD-YNHPC----QIMADAL-----------------TIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPK 140 (261)
Q Consensus 83 ~~-~~HPt----Q~L~Dl~-----------------Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~ 140 (261)
.. +-.-| +.|+.++ .+.+....+.|+|+++.||. -.+.|++..+.-+|++++.++-.
T Consensus 266 ~p~G~~~T~~~l~~la~~~g~~~~~~i~~e~~~~~~~~~d~~~~l~gkrv~i~~~~-~~~~~l~~~L~elG~~vv~v~~~ 344 (458)
T 1mio_B 266 TPIGVSATDEFIMALSEATGKEVPASIEEERGQLIDLMIDAQQYLQGKKVALLGDP-DEIIALSKFIIELGAIPKYVVTG 344 (458)
T ss_dssp CCBHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHTHHHHTTCEEEEEECH-HHHHHHHHHHHTTTCEEEEEEES
T ss_pred CCcCHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCc-hHHHHHHHHHHHCCCEEEEEEeC
Confidence 10 00000 1111110 01111123689999999994 56777887777899987765432
Q ss_pred CCCCCHHHHHH----HHHhC-C-CeEEEEcCHH---HHhC--CCCEEEEec
Q 024871 141 GFEPDKETVEK----ARKAG-I-SKIEITNDPK---EVVQ--GADVVYSDV 180 (261)
Q Consensus 141 ~~~~~~~~~~~----~~~~g-~-~~i~~~~d~~---~a~~--~aDviy~~~ 180 (261)
.. +++..+. +++.+ . ..+....|+. +.++ +.|+++...
T Consensus 345 ~~--~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~pDl~ig~~ 393 (458)
T 1mio_B 345 TP--GMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLISNT 393 (458)
T ss_dssp SC--CHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEEESG
T ss_pred CC--CHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCCCEEEeCc
Confidence 22 3332222 22332 1 2454444654 3344 789888875
No 178
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.72 E-value=2.9 Score=37.30 Aligned_cols=73 Identities=14% Similarity=0.018 Sum_probs=46.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCC--CCCCCHHHHHHHHH---h-CCCeEEEEcCHHHHhCCCCEEEE
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPK--GFEPDKETVEKARK---A-GISKIEITNDPKEVVQGADVVYS 178 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~--~~~~~~~~~~~~~~---~-g~~~i~~~~d~~~a~~~aDviy~ 178 (261)
+..||+++|- +.+..+++..++..|. ++++.... .-......++.... . ....+..+.| .+++++||+|+.
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIi 84 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVI 84 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEE
Confidence 4679999995 8899998888777787 88877543 10011111111111 1 1245666666 578999999888
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 85 aa 86 (315)
T 3tl2_A 85 TA 86 (315)
T ss_dssp CC
T ss_pred eC
Confidence 64
No 179
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.59 E-value=0.83 Score=40.87 Aligned_cols=67 Identities=22% Similarity=0.205 Sum_probs=42.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-HHH---H---hCCCeEEEEcCHHHHhCCCCEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-KAR---K---AGISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~~~---~---~g~~~i~~~~d~~~a~~~aDviy 177 (261)
..||+++|- ++|..+++..+..-+. ++++.-- +++.++ .+. + .. ..++++.+..+++++||+|+
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-----~~~~~~g~~~dl~~~~~~~-~~~~v~~~~~~a~~~aDvVi 77 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-----VKDRTKGDALDLEDAQAFT-APKKIYSGEYSDCKDADLVV 77 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-----SHHHHHHHHHHHHGGGGGS-CCCEEEECCGGGGTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-----CchHHHHHHHHHHHHHHhc-CCeEEEECCHHHhCCCCEEE
Confidence 479999997 8888888776655453 6776643 222222 111 1 11 24445556788999999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 78 i~a 80 (318)
T 1ez4_A 78 ITA 80 (318)
T ss_dssp ECC
T ss_pred ECC
Confidence 874
No 180
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.55 E-value=1 Score=39.40 Aligned_cols=64 Identities=16% Similarity=0.181 Sum_probs=46.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...|.+++++.+. ++..+.+.+.| +..+.+++++++++|+|+.-.
T Consensus 31 ~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~~~g---~~~~~~~~~~~~~~DvVi~av 94 (316)
T 2uyy_A 31 KKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRT-----AEKCDLFIQEG---ARLGRTPAEVVSTCDITFACV 94 (316)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----GGGGHHHHHTT---CEECSCHHHHHHHCSEEEECC
T ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHcC---CEEcCCHHHHHhcCCEEEEeC
Confidence 6899999 5888888888877778888776543 22233344555 245778999999999998864
No 181
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=84.97 E-value=3.6 Score=36.74 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=49.2
Q ss_pred EEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC-----------CeEEEEcCHHHHhCCCCEEE
Q 024871 109 KVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI-----------SKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 109 ~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~-----------~~i~~~~d~~~a~~~aDviy 177 (261)
||+++|- +++..+++..+..-|.++++.... ++.++.+++.+. ..+..++|++++++++|+|+
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVi 90 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL 90 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEE
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEE
Confidence 8999995 889999998888888888877543 344444444320 13677889999999999988
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
.-.
T Consensus 91 lav 93 (366)
T 1evy_A 91 FVI 93 (366)
T ss_dssp ECC
T ss_pred ECC
Confidence 864
No 182
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.87 E-value=1.7 Score=38.61 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=43.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH--hCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK--AGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~--~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+..||+++|- ++|..+++..+..-|. ++++.--+.-.......+.... .....++++.+..+++++||+|+...
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~a 82 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICA 82 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECC
Confidence 4579999997 8888888776655453 6776643210011111111111 11123344446688999999999875
No 183
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=84.65 E-value=3 Score=39.21 Aligned_cols=70 Identities=16% Similarity=0.262 Sum_probs=49.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC-------------CCCCCCC-HHHHHHHHHhCCCeEEEEcCHHHHhCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC-------------PKGFEPD-KETVEKARKAGISKIEITNDPKEVVQG 172 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~-------------P~~~~~~-~~~~~~~~~~g~~~i~~~~d~~~a~~~ 172 (261)
-.+|++|| .+.|.-.++..++..|.+++.+- ++-++|. +++++.+.+.| ++.++.|.++++++
T Consensus 21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g--~l~~tt~~~~ai~~ 97 (444)
T 3vtf_A 21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSG--RLSFAESAEEAVAA 97 (444)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEECSSHHHHHHT
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcC--CeeEEcCHHHHHhc
Confidence 46899999 57888777777777788887553 1223443 33444333444 68899999999999
Q ss_pred CCEEEEe
Q 024871 173 ADVVYSD 179 (261)
Q Consensus 173 aDviy~~ 179 (261)
+|+++..
T Consensus 98 ad~~~I~ 104 (444)
T 3vtf_A 98 TDATFIA 104 (444)
T ss_dssp SSEEEEC
T ss_pred CCceEEE
Confidence 9998864
No 184
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=84.61 E-value=9.3 Score=36.23 Aligned_cols=177 Identities=18% Similarity=0.188 Sum_probs=101.8
Q ss_pred EEEeCCCCcCCCCCCCHHHHHHHHhhh---ccEEEEeeCCcch----HHHHhhhCCCcEEeCCCCCCChhH--HHHHHHH
Q 024871 27 AIYLGPDDIQMGKREETRDAARVLCRY---NDIIMARVFGHQD----ILDLAKFATVPVINGLTDYNHPCQ--IMADALT 97 (261)
Q Consensus 27 ~~~l~~~~s~~~kgEs~~Dt~~~ls~~---~D~iv~R~~~~~~----~~~~a~~~~vPVINa~~~~~HPtQ--~L~Dl~T 97 (261)
++.+|.++-. .-+..++.+..+... +-.|=.-.++... ++++-+...+||+| |..|=|- +|+=|+.
T Consensus 134 PI~LD~gt~~--~~~d~defve~v~~~~P~fG~InlEDf~ap~af~il~ryr~~~~ipvFn---DD~qGTA~V~lAglln 208 (487)
T 3nv9_A 134 PICIDSKNKE--GKNDPDAVIEFVQRIQHTFGAINLEDISQPNCYKILDVLRESCDIPVWH---DDQQGTASVTLAGLLN 208 (487)
T ss_dssp EEECCCBCTT--SCBCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEE---TTTHHHHHHHHHHHHH
T ss_pred eeEEeCCCcc--ccCCHHHHHHHHHHhCCCCCeecHhhcCCchHHHHHHHHHhhccCCccc---cccchHHHHHHHHHHH
Confidence 4567665322 123455555444443 3456666555432 34454556899999 3355554 4566666
Q ss_pred HHHHhC-CCCCcEEEEEcCCC-chHHHHHHHHhcCCc---EEEEeCCCCCCC--CHHH---------HHHHHHhCCCeEE
Q 024871 98 IIEHVG-RLEGTKVVYVGDGN-NIVHSWLLMASVIPF---HFVCACPKGFEP--DKET---------VEKARKAGISKIE 161 (261)
Q Consensus 98 i~e~~g-~l~~~~i~~vGd~~-~v~~S~~~~~~~~g~---~~~~~~P~~~~~--~~~~---------~~~~~~~g~~~i~ 161 (261)
-.+..| +++..||++.|-+. .+.-.-+ +...|+ +++++--+|+-- .+++ .+.++..+ ..
T Consensus 209 Alki~gk~l~d~riV~~GAGaAGigia~l--l~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n-~~-- 283 (487)
T 3nv9_A 209 ALKLVKKDIHECRMVFIGAGSSNTTCLRL--IVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTN-PS-- 283 (487)
T ss_dssp HHHHHTCCGGGCCEEEECCSHHHHHHHHH--HHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSC-TT--
T ss_pred HHHHhCCChhhcEEEEECCCHHHHHHHHH--HHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcc-cc--
Confidence 666655 59999999999752 3332222 223565 677765555321 1222 12233332 11
Q ss_pred EEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC-CCCCCCcccccc
Q 024871 162 ITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC-LPAERGVEVTEG 231 (261)
Q Consensus 162 ~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~-lP~~rg~Ev~~~ 231 (261)
...++.|+++++||++-.+- . .+=-+|+++++...++.||+-. =|. .|++.+
T Consensus 284 ~~~~L~eav~~adVlIG~S~----~-----------~pg~ft~e~V~~Ma~~PIIFaLSNPt---pEi~pe 336 (487)
T 3nv9_A 284 KFGSIAEACVGADVLISLST----P-----------GPGVVKAEWIKSMGEKPIVFCCANPV---PEIYPY 336 (487)
T ss_dssp CCCSHHHHHTTCSEEEECCC----S-----------SCCCCCHHHHHTSCSSCEEEECCSSS---CSSCHH
T ss_pred cCCCHHHHHhcCCEEEEecc----c-----------CCCCCCHHHHHhhcCCCEEEECCCCC---ccCCHH
Confidence 24589999999999988741 1 0124788888877788888764 342 377643
No 185
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=84.60 E-value=2.4 Score=37.38 Aligned_cols=72 Identities=19% Similarity=0.177 Sum_probs=46.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- +.+..+++..++.-|. ++++.....-.......+.... .+ ...+..+.|. +++++||+|+...
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~av 80 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITA 80 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 579999996 7888888877776676 8877765431111111111111 11 2467777887 7999999999864
No 186
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.55 E-value=3.1 Score=39.28 Aligned_cols=68 Identities=15% Similarity=0.244 Sum_probs=49.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC-----------------CCeEEEEcCHHHH
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG-----------------ISKIEITNDPKEV 169 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g-----------------~~~i~~~~d~~~a 169 (261)
..||+++| .+.+..+++..++..|.++++... +++.++.+++.+ .+.+..++|++++
T Consensus 8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~-----~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDV-----DQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEEC-----CHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH
Confidence 48999999 488999998888888988887643 233333333211 1257889999999
Q ss_pred hCCCCEEEEec
Q 024871 170 VQGADVVYSDV 180 (261)
Q Consensus 170 ~~~aDviy~~~ 180 (261)
+++||+|+.-.
T Consensus 82 ~~~aDvviiaV 92 (478)
T 2y0c_A 82 VAHGDVQFIAV 92 (478)
T ss_dssp HHHCSEEEECC
T ss_pred hhcCCEEEEEe
Confidence 99999998864
No 187
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.28 E-value=4.6 Score=37.85 Aligned_cols=70 Identities=23% Similarity=0.302 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC-------------CCCC-HHHHHHHHHhCCCeEEEEcCHHHHhCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG-------------FEPD-KETVEKARKAGISKIEITNDPKEVVQG 172 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~-------------~~~~-~~~~~~~~~~g~~~i~~~~d~~~a~~~ 172 (261)
..+|+++| .+++.-.++..++..|.++++..-.. |+|. +++++..... +.++.+.|+++++++
T Consensus 8 ~~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~--g~l~~ttd~~ea~~~ 84 (446)
T 4a7p_A 8 SVRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKA--GRLSFTTDLAEGVKD 84 (446)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHT--TCEEEESCHHHHHTT
T ss_pred ceEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhccc--CCEEEECCHHHHHhc
Confidence 37899999 57888888888888898888765321 1221 1111111112 358889999999999
Q ss_pred CCEEEEe
Q 024871 173 ADVVYSD 179 (261)
Q Consensus 173 aDviy~~ 179 (261)
||+|+.-
T Consensus 85 aDvvii~ 91 (446)
T 4a7p_A 85 ADAVFIA 91 (446)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 9999885
No 188
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=84.22 E-value=4.2 Score=36.25 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=44.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhc---CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE----cCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASV---IPFHFVCACPKGFEPDKETVEKARKAGISKIEIT----NDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~---~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~----~d~~~a~~~aDviy~~~ 180 (261)
.||+++|-.++|..+++.++.. +.-+++++-.+. ......++. +... ....++ ++..+++++||+|+...
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl-~~~~-~~~~v~~~~~~~~~~~~~~aDivii~a 77 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDL-SHIP-TAVKIKGFSGEDATPALEGADVVLISA 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHH-HTSC-SSEEEEEECSSCCHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHh-hCCC-CCceEEEecCCCcHHHhCCCCEEEEeC
Confidence 4899999778898888776643 456788776544 222333332 2222 223333 36688999999988763
No 189
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=84.20 E-value=4.1 Score=36.22 Aligned_cols=111 Identities=12% Similarity=0.144 Sum_probs=68.9
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhc-CCc-EEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEcCHHHHhCCCCEEE
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASV-IPF-HFVCACPKGFEPDKETVEKAR-KAGISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~-~g~-~~~~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d~~~a~~~aDviy 177 (261)
++..-+.++++++|- +..+.+.+..+.. .+. ++.+.... -.+.+.+..+ +.| ..++.. |+++++++||+|+
T Consensus 115 ~La~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g-~~~~~~-~~~eav~~aDIVi 188 (313)
T 3hdj_A 115 ALARPRSSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCG-VPARMA-APADIAAQADIVV 188 (313)
T ss_dssp HHSCTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHT-SCEEEC-CHHHHHHHCSEEE
T ss_pred hhccCCCcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcC-CeEEEe-CHHHHHhhCCEEE
Confidence 444456799999995 6677776665543 454 67777766 3344444333 346 356667 9999999999999
Q ss_pred EecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC-CcccccccccC
Q 024871 178 SDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER-GVEVTEGVIEA 235 (261)
Q Consensus 178 ~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r-g~Ev~~~v~~~ 235 (261)
+-+-. .+ ++ +..+ ..+++..+.-.+.... -.|++++++..
T Consensus 189 ~aT~s--~~------------pv-l~~~---~l~~G~~V~~vGs~~p~~~El~~~~~~~ 229 (313)
T 3hdj_A 189 TATRS--TT------------PL-FAGQ---ALRAGAFVGAIGSSLPHTRELDDEALRR 229 (313)
T ss_dssp ECCCC--SS------------CS-SCGG---GCCTTCEEEECCCSSTTCCCCCHHHHHH
T ss_pred EccCC--CC------------cc-cCHH---HcCCCcEEEECCCCCCchhhcCHHHHhc
Confidence 87521 10 11 3333 3467778776654322 25888887753
No 190
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=83.74 E-value=2.9 Score=37.37 Aligned_cols=73 Identities=19% Similarity=0.125 Sum_probs=47.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHH---HHHhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEK---ARKAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~---~~~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
...||+++|- +.+..+++..++.-|. ++++...+.-.......+. ....+ ..++..+.|. +++++||+|+...
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence 3469999996 7888888887777776 8777655432121111111 11111 2468888898 8999999999864
No 191
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=83.36 E-value=4 Score=35.88 Aligned_cols=161 Identities=11% Similarity=0.029 Sum_probs=92.1
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchH-------HHHhhh--CCCcEE
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDI-------LDLAKF--ATVPVI 79 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~-------~~~a~~--~~vPVI 79 (261)
.+...=+..++..+|....+..-. + ..|.+.+.++-+... ++.+-+=.+-...+ ...|+. +-=+|+
T Consensus 36 S~Sp~~hn~~~~~~Gl~~~Y~~~~---~-~~~~l~~~v~~l~~~~~~G~nVTiP~K~~i~~~ld~~~~~A~~iGavNti~ 111 (297)
T 2egg_A 36 SLSPLMHNDAFARLGIPARYHLFS---V-EPGQVGAAIAGVRALGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTII 111 (297)
T ss_dssp CSHHHHHHHHHHHTTCCEEEEEEE---C-CTTCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECHHHHHHTCCCEEE
T ss_pred ccCHHHHHHHHHHcCcCcEEEEEE---c-CHHHHHHHHHHHhhCCCCeEEECCcCHHHHHHHHHHHhHHHHHhCCCCeEE
Confidence 345555678999999987765332 1 247889988877654 45555554432221 222222 112455
Q ss_pred e-CCCCCCChhHHHHHHHHHHHHhC--CCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHh
Q 024871 80 N-GLTDYNHPCQIMADALTIIEHVG--RLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKA 155 (261)
Q Consensus 80 N-a~~~~~HPtQ~L~Dl~Ti~e~~g--~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~ 155 (261)
| .+.-..+=|-...=+..+ +.++ .++|++++++|- +.+....+..+...|. +++++.... +...+.+++.
T Consensus 112 ~~~g~l~g~nTd~~G~~~~l-~~~~~~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~----~ka~~la~~~ 185 (297)
T 2egg_A 112 NNDGRLVGYNTDGLGYVQAL-EEEMNITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTV----EKAERLVREG 185 (297)
T ss_dssp EETTEEEEECCHHHHHHHHH-HHHTTCCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSH----HHHHHHHHHS
T ss_pred CcCCeEeeccCCHHHHHHHH-HHhCCCCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHh
Confidence 4 221111222221112222 3444 689999999996 6789998888888997 888875421 1222233343
Q ss_pred CCC--eEEEEcCHHHHhCCCCEEEEec
Q 024871 156 GIS--KIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 156 g~~--~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+.. .+.-.+++.++++++|+|+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~aDivIn~t 212 (297)
T 2egg_A 186 DERRSAYFSLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp CSSSCCEECHHHHHHTGGGCSEEEECS
T ss_pred hhccCceeeHHHHHhhhccCCEEEECC
Confidence 321 2211235677889999999975
No 192
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.24 E-value=2.9 Score=37.39 Aligned_cols=166 Identities=14% Similarity=0.086 Sum_probs=90.4
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeC-CcchH------HHHhhhCC-C-cEE
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVF-GHQDI------LDLAKFAT-V-PVI 79 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~-~~~~~------~~~a~~~~-v-PVI 79 (261)
++...=+..++.++|....|..-. + ..|.+.+..+.+... ...+-+=.+ +...+ .+.|+..+ | .|+
T Consensus 50 S~SP~ihn~~f~~~Gl~~~Y~~~~---v-~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~ls~~A~~iGAVNTi~ 125 (315)
T 3tnl_A 50 SLSPTMHNEAFAKLGLDYVYLAFE---V-GDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVV 125 (315)
T ss_dssp CSHHHHHHHHHHHHTCCEEEEEEE---C-CHHHHHHHHHHHHHTTCCEEEECTTSTTTGGGGCSEECHHHHHHTCCSEEE
T ss_pred cccHHHHHHHHHHcCCCcEEEEEe---c-CHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHhcCHHHHHhCccceEE
Confidence 344555677888999887775321 1 135677777777654 445544443 22222 22333211 1 345
Q ss_pred eCCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCC--CCCCHHHHHHHHHh
Q 024871 80 NGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKG--FEPDKETVEKARKA 155 (261)
Q Consensus 80 Na~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~--~~~~~~~~~~~~~~ 155 (261)
|-++ -..|=|-...=+..+.+...+++|++++++|- +.+..+.+..+...|. +++++.-.. ..-.+++.+...+.
T Consensus 126 ~~~g~l~G~NTD~~Gf~~~L~~~~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~ 204 (315)
T 3tnl_A 126 NDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK 204 (315)
T ss_dssp EETTEEEEECCHHHHHHHHHHHTTCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred ecCCEEEEeCCCHHHHHHHHHHcCCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh
Confidence 5222 11222333222333344333689999999996 6888998888888998 888775431 11111222222222
Q ss_pred CCCeEEEE--c---CHHHHhCCCCEEEEec
Q 024871 156 GISKIEIT--N---DPKEVVQGADVVYSDV 180 (261)
Q Consensus 156 g~~~i~~~--~---d~~~a~~~aDviy~~~ 180 (261)
....+... + ++.++++++|+|+..+
T Consensus 205 ~~~~~~~~~~~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 205 TDCKAQLFDIEDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp SSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred cCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence 11233332 2 2557788999999875
No 193
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.97 E-value=4.2 Score=35.46 Aligned_cols=69 Identities=14% Similarity=0.050 Sum_probs=47.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC--------CeEEEEc--CHHHHhCCCCEEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI--------SKIEITN--DPKEVVQGADVVY 177 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~--------~~i~~~~--d~~~a~~~aDviy 177 (261)
.||+++|- +++..+++..+..-|.++++...+ .+++..+.+++.|. ..+..++ +++++++++|+|+
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi 76 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTE---FDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL 76 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCG---GGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEcc---CCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEE
Confidence 37999995 788888887777778888877541 02344455555442 1246676 8888999999998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 77 ~~v 79 (335)
T 1txg_A 77 LGV 79 (335)
T ss_dssp ECS
T ss_pred EcC
Confidence 864
No 194
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.96 E-value=3.3 Score=36.65 Aligned_cols=73 Identities=15% Similarity=0.020 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCC-------cEEEEeCCCCCCCCHHHHHHHHHhC-----------CCeEEEEcCHHH
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIP-------FHFVCACPKGFEPDKETVEKARKAG-----------ISKIEITNDPKE 168 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g-------~~~~~~~P~~~~~~~~~~~~~~~~g-----------~~~i~~~~d~~~ 168 (261)
..||+++|- +++..+++..+..-| .++++.....-.......+.+++.+ ...+..++|+++
T Consensus 8 ~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 8 SKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 468999994 788888877776666 7787776543211001223333321 023677889999
Q ss_pred HhCCCCEEEEec
Q 024871 169 VVQGADVVYSDV 180 (261)
Q Consensus 169 a~~~aDviy~~~ 180 (261)
+++++|+|+.-.
T Consensus 87 ~~~~aD~Vilav 98 (354)
T 1x0v_A 87 AAEDADILIFVV 98 (354)
T ss_dssp HHTTCSEEEECC
T ss_pred HHcCCCEEEEeC
Confidence 999999998864
No 195
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=82.54 E-value=4.7 Score=36.94 Aligned_cols=66 Identities=18% Similarity=0.107 Sum_probs=47.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC---------------CeEEEEcCHHHHhCC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI---------------SKIEITNDPKEVVQG 172 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~---------------~~i~~~~d~~~a~~~ 172 (261)
.||+++|- +++...++..++. |.+++++.. +++.++.+++.+. ..+..+.|+++++++
T Consensus 1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~-----~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~ 73 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDI-----LPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE 73 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEECS-----CHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHhC-CCEEEEEEC-----CHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcC
Confidence 37999995 8899999888888 988877643 2333333333221 246778899899999
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
+|+|+...
T Consensus 74 aDvviiav 81 (402)
T 1dlj_A 74 AELVIIAT 81 (402)
T ss_dssp CSEEEECC
T ss_pred CCEEEEec
Confidence 99998864
No 196
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=82.41 E-value=1.5 Score=39.72 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=49.5
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCC----CCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQG----ADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~----aDviy~~~ 180 (261)
.||++|| .+++..|++..+...|.+++... .+++..+.+++.|. ..+.|+++++++ +|+|+.-.
T Consensus 9 ~kIgIIG-~G~mG~slA~~L~~~G~~V~~~d-----r~~~~~~~a~~~G~---~~~~~~~e~~~~a~~~aDlVilav 76 (341)
T 3ktd_A 9 RPVCILG-LGLIGGSLLRDLHAANHSVFGYN-----RSRSGAKSAVDEGF---DVSADLEATLQRAAAEDALIVLAV 76 (341)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEC-----SCHHHHHHHHHTTC---CEESCHHHHHHHHHHTTCEEEECS
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEe-----CCHHHHHHHHHcCC---eeeCCHHHHHHhcccCCCEEEEeC
Confidence 6899999 68999999999988898877654 34566677777774 346788887764 79988864
No 197
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=82.35 E-value=8.7 Score=36.27 Aligned_cols=69 Identities=19% Similarity=0.247 Sum_probs=41.3
Q ss_pred CcEEEEEcCCCchHHHHHHHH--h--cC-CcEEEEeCCCCCCCCHHHHH----HHH----HhC-CCeEEEEcCHHHHhCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMA--S--VI-PFHFVCACPKGFEPDKETVE----KAR----KAG-ISKIEITNDPKEVVQG 172 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~--~--~~-g~~~~~~~P~~~~~~~~~~~----~~~----~~g-~~~i~~~~d~~~a~~~ 172 (261)
..||+++|.++-....++..+ . .+ +-++++..-. ++.++ ..+ ..+ ..++..+.|+++++++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~-----~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~ 102 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDND-----KERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD 102 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSC-----HHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCC-----HHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC
Confidence 569999998652133233222 2 34 4567776532 22221 111 222 2468888899999999
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
||+|+...
T Consensus 103 AD~VViaa 110 (472)
T 1u8x_X 103 VDFVMAHI 110 (472)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcC
Confidence 99999874
No 198
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=82.33 E-value=5.8 Score=33.51 Aligned_cols=98 Identities=17% Similarity=0.202 Sum_probs=55.1
Q ss_pred cEEEEE--cCCCchHHHHHHHHhc--CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc------CHHHHh--CCCCE
Q 024871 108 TKVVYV--GDGNNIVHSWLLMASV--IPFHFVCACPKGFEPDKETVEKARKAGISKIEITN------DPKEVV--QGADV 175 (261)
Q Consensus 108 ~~i~~v--Gd~~~v~~S~~~~~~~--~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~------d~~~a~--~~aDv 175 (261)
+||+++ |.+. -+..++..+.. ++.+++.+-.+ .++...++.|+++|+..+.+.. .+.+.+ .+.|+
T Consensus 9 ~ri~vl~SG~gs-nl~all~~~~~~~~~~~I~~Vis~--~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dl 85 (215)
T 3kcq_A 9 LRVGVLISGRGS-NLEALAKAFSTEESSVVISCVISN--NAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDL 85 (215)
T ss_dssp EEEEEEESSCCH-HHHHHHHHTCCC-CSEEEEEEEES--CTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSE
T ss_pred CEEEEEEECCcH-HHHHHHHHHHcCCCCcEEEEEEeC--CcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCE
Confidence 466554 3333 34455555432 34554432211 1112235678888865443221 122233 35788
Q ss_pred EEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 176 VYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 176 iy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
|..-.|. ..+.+++++..+..++=+|| ||.+||
T Consensus 86 ivlagy~-----------------~IL~~~~l~~~~~~~iNiHpSLLP~yrG 120 (215)
T 3kcq_A 86 VCLAGFM-----------------SILPEKFVTDWHHKIINIHPSLLPSFKG 120 (215)
T ss_dssp EEESSCC-----------------SCCCHHHHHHTTTSEEEEESSCTTTTCS
T ss_pred EEEeCCc-----------------eEeCHHHHhhccCCeEEECcccccCCCC
Confidence 8887542 34788888888778999999 899885
No 199
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=82.31 E-value=1.7 Score=38.79 Aligned_cols=74 Identities=15% Similarity=0.036 Sum_probs=45.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-------EEEEeCCC----CCCCCHHHHHHHHH-hC-CCeEEEEcCHHHHhCCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-------HFVCACPK----GFEPDKETVEKARK-AG-ISKIEITNDPKEVVQGA 173 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-------~~~~~~P~----~~~~~~~~~~~~~~-~g-~~~i~~~~d~~~a~~~a 173 (261)
..||+++|-.+.|..+++..+..-|. ++++.-.+ .-.......+.... .. ...+..+.|..+++++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 47999999878898888877655553 67665321 00000111111111 01 13567778999999999
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+|+...
T Consensus 85 D~Vi~~a 91 (329)
T 1b8p_A 85 DVALLVG 91 (329)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999864
No 200
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=81.91 E-value=2.3 Score=38.01 Aligned_cols=71 Identities=15% Similarity=0.126 Sum_probs=42.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- +++..+++..+..-|. ++++.-.+.-......++.... .+ ..++.-+ +..+++++||+|+...
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCCCCEEEECC
Confidence 48999994 8888888877665554 7777754331122222222111 11 1234334 5578999999988864
No 201
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=81.72 E-value=2.5 Score=35.63 Aligned_cols=63 Identities=22% Similarity=0.258 Sum_probs=44.9
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC-cEEEEeCCCCCCCCHHHHHHHHH-hCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP-FHFVCACPKGFEPDKETVEKARK-AGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g-~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++..+++..+...| .+++++.+ +++..+.+.+ .| +..+.|+++++ ++|+|+.-.
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~r-----~~~~~~~~~~~~g---~~~~~~~~~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANR-----GAEKRERLEKELG---VETSATLPELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECS-----SHHHHHHHHHHTC---CEEESSCCCCC-TTSEEEECS
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCeEEEECC-----CHHHHHHHHHhcC---CEEeCCHHHHh-cCCEEEEEe
Confidence 3799999 4888888887777778 78776654 3344444444 35 34577888888 999999864
No 202
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=81.42 E-value=3.8 Score=36.28 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=42.1
Q ss_pred EEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 109 KVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 109 ~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
||+++|- ++|..+++..+..-+. ++++.-.+.-.......+.... .+ ..++..+.|. +++++||+|+...
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTA 75 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeC
Confidence 6899996 7888887766554454 5776654321121112222221 12 2357766786 7999999998864
No 203
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=81.35 E-value=6.7 Score=35.29 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=61.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE-E---EcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIE-I---TNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~-~---~~d~~~a~~~aDviy~~~ 180 (261)
+++.+|+++|- +.+.+..+..+..+|.+++.+... ++-.+.+++.+...+. . .+++.+.++++|+|+...
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~-----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECC
Confidence 67789999997 889999999999999988776542 3344455544322221 1 124567788999998865
Q ss_pred ccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEee
Q 024871 181 WASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMH 218 (261)
Q Consensus 181 w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH 218 (261)
-.... ..+..++++.++..+++..+.-
T Consensus 239 ~~~~~-----------~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 239 LVPGR-----------RAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp CCTTS-----------SCCCCBCHHHHTTSCTTCEEEE
T ss_pred CcCCC-----------CCCeecCHHHHhhCCCCCEEEE
Confidence 11110 1234456677776666655544
No 204
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.30 E-value=5 Score=28.79 Aligned_cols=68 Identities=13% Similarity=0.140 Sum_probs=45.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCC-cEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE-----cCHHHHhCCCCEEEEe
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIP-FHFVCACPKGFEPDKETVEKARKAGISKIEIT-----NDPKEVVQGADVVYSD 179 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g-~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~-----~d~~~a~~~aDviy~~ 179 (261)
.+++|+++|- +.+...++..+...| .+++.+... ++-.+.+...+. .+... ++++++++++|+|+..
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~-----~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~ 76 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHD-----LAALAVLNRMGV-ATKQVDAKDEAGLAKALGGFDAVISA 76 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESC-----HHHHHHHHTTTC-EEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHhCCC-cEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 4689999998 999999998888888 788776542 333333443342 22211 2345678899998876
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 77 ~ 77 (118)
T 3ic5_A 77 A 77 (118)
T ss_dssp S
T ss_pred C
Confidence 4
No 205
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.28 E-value=5.1 Score=35.89 Aligned_cols=67 Identities=19% Similarity=0.232 Sum_probs=48.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHH-----------HHHhCC-----------CeEEEEcC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEK-----------ARKAGI-----------SKIEITND 165 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~-----------~~~~g~-----------~~i~~~~d 165 (261)
.||++||- +-+.++|+..++.-|.+|++.-|. ++.++. ..+.|. +.+..+.|
T Consensus 7 ~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~-----~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~ 80 (319)
T 3ado_A 7 GDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIE-----PRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSC-----HHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccc
Confidence 58999996 778999999988889998887653 222221 112220 24778899
Q ss_pred HHHHhCCCCEEEEec
Q 024871 166 PKEVVQGADVVYSDV 180 (261)
Q Consensus 166 ~~~a~~~aDviy~~~ 180 (261)
+++++++||+|+=-.
T Consensus 81 l~~a~~~ad~ViEav 95 (319)
T 3ado_A 81 LAEAVEGVVHIQECV 95 (319)
T ss_dssp HHHHTTTEEEEEECC
T ss_pred hHhHhccCcEEeecc
Confidence 999999999988654
No 206
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.28 E-value=2.4 Score=36.43 Aligned_cols=63 Identities=13% Similarity=0.153 Sum_probs=44.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .+++...++..+...|.++++.. .. .-. +.+.+.| +..+.+++++++++|+|+.-.
T Consensus 4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~-~~~----~~~~~~g---~~~~~~~~~~~~~~D~vi~~v 66 (295)
T 1yb4_A 4 MKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IG-PVA----DELLSLG---AVNVETARQVTEFADIIFIMV 66 (295)
T ss_dssp CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SS-CCC----HHHHTTT---CBCCSSHHHHHHTCSEEEECC
T ss_pred CEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CH-HHH----HHHHHcC---CcccCCHHHHHhcCCEEEEEC
Confidence 5899999 58888888887777788887664 22 111 2233344 244678999999999999864
No 207
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=81.26 E-value=11 Score=35.24 Aligned_cols=73 Identities=19% Similarity=0.149 Sum_probs=42.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHh----cC-CcEEEEeCCCC--CCCCHHHHHHHH----HhC-CCeEEEEcCHHHHhCCCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMAS----VI-PFHFVCACPKG--FEPDKETVEKAR----KAG-ISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~----~~-g~~~~~~~P~~--~~~~~~~~~~~~----~~g-~~~i~~~~d~~~a~~~aD 174 (261)
..||+++|.++-....++..+. .+ +-++++..-.. -.. +...+.++ ..+ ..++..+.|.++++++||
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~-~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD 85 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKL-EIVGALAKRMVEKAGVPIEIHLTLDRRRALDGAD 85 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHH-HHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHH-HHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCC
Confidence 4799999986533555543333 24 44677765422 110 01111111 222 246777889999999999
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+...
T Consensus 86 ~VVita 91 (450)
T 1s6y_A 86 FVTTQF 91 (450)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
No 208
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=81.23 E-value=2.5 Score=37.31 Aligned_cols=69 Identities=25% Similarity=0.386 Sum_probs=48.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCC----cEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIP----FHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g----~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+..||+++|- +++..+++..+..-| .++++..+.. ..+..+.+++.| +..+.+..++++++|+|+.-.
T Consensus 20 ~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~---~~~~~~~l~~~G---~~~~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 20 FQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDM---DLATVSALRKMG---VKLTPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp --CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCT---TSHHHHHHHHHT---CEEESCHHHHHHHCSEEEECS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCc---cHHHHHHHHHcC---CEEeCChHHHhccCCEEEEEe
Confidence 34568999994 889999988877777 5777665432 101334455666 345778899999999999864
No 209
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=80.94 E-value=4.3 Score=35.85 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=45.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHH---HhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKAR---KAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~---~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- ++|..+++..++..|. ++++.-.+.-.......+..+ ..+ ..++..+.|. +++++||+|+...
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999997 8888888887777775 766664332111111111111 111 2457777887 8899999999874
No 210
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=80.68 E-value=2.7 Score=37.34 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=43.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC--cEEEEeCCCCCCCCHHHHHHHHHhC-CCeEEEE---cCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP--FHFVCACPKGFEPDKETVEKARKAG-ISKIEIT---NDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g--~~~~~~~P~~~~~~~~~~~~~~~~g-~~~i~~~---~d~~~a~~~aDviy~~~ 180 (261)
.||+++|-.++|..+++..+..-| -++++.--+. ......+ +.+.. ...++.+ +|+++++++||+|+...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~d-L~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAAD-LSHIETRATVKGYLGPEQLPDCLKGCDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHH-HTTSSSSCEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHH-HhccCcCceEEEecCCCCHHHHhCCCCEEEECC
Confidence 489999976888888877766656 4676664332 1111111 11111 1245553 57899999999999864
No 211
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=80.35 E-value=5 Score=37.91 Aligned_cols=152 Identities=16% Similarity=0.172 Sum_probs=83.1
Q ss_pred HHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCC--C--CCCChhHHHHHH
Q 024871 20 FSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGL--T--DYNHPCQIMADA 95 (261)
Q Consensus 20 ~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~--~--~~~HPtQ~L~Dl 95 (261)
...+|..++.. +..|-+++|..+.-.+-+.+++.+.......+.+.+.-++|.|.+. | ...-=.+.|+.+
T Consensus 225 L~~~Gi~v~~~------~~gg~~~~el~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~p~Gi~~T~~~L~~ia~~ 298 (483)
T 3pdi_A 225 LDELGLRVLCT------LAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTPWFEGSFYGITDTSQALRDFARL 298 (483)
T ss_dssp HHHHTEEEEEE------ETSSBCHHHHTTGGGCSEEEEESCCTTHHHHHHHHHHHCCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHCCCcEEEE------CCCcCCHHHHHhhhcCCEEEEEchhhHHHHHHHHHHHhCCCEeecCCCCHHHHHHHHHHHHHH
Confidence 45677776532 1245677887776555556655554445566677677788988742 1 000111222222
Q ss_pred HH-----------H-----------HHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH
Q 024871 96 LT-----------I-----------IEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR 153 (261)
Q Consensus 96 ~T-----------i-----------~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~ 153 (261)
+- | ......|.|+|+++.||... +.+++..+.-+|++++.++-.. ..++..+..+
T Consensus 299 ~g~~~i~~~~e~~i~~er~~~~~al~~~~~~l~GKrv~i~~~~~~-~~~l~~~L~ElGmevv~~gt~~--~~~~d~~~~~ 375 (483)
T 3pdi_A 299 LDDPDLTARTEALIAREEAKVRAALEPWRARLEGKRVLLYTGGVK-SWSVVSALQDLGMKVVATGTKK--STEEDKARIR 375 (483)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSSC-HHHHHHHHHHHTCEEEEECBSS--SCHHHHHHHH
T ss_pred hCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCCch-HHHHHHHHHHCCCEEEEEecCC--CCHHHHHHHH
Confidence 20 1 00112378999999999654 4577777777899988775322 2333333333
Q ss_pred H-hCCCeEEEEc-CHH---HHh--CCCCEEEEec
Q 024871 154 K-AGISKIEITN-DPK---EVV--QGADVVYSDV 180 (261)
Q Consensus 154 ~-~g~~~i~~~~-d~~---~a~--~~aDviy~~~ 180 (261)
+ .+...+.+.+ |+. +.+ .+.|+++...
T Consensus 376 ~~l~~~~~i~~d~d~~el~~~i~~~~pDL~ig~~ 409 (483)
T 3pdi_A 376 ELMGDDVKMLDEGNARVLLKTVDEYQADILIAGG 409 (483)
T ss_dssp HHSCSSCCBCCSCSHHHHHHHHHHTTCSEEECCG
T ss_pred HhcCCCCEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 3 2321122222 343 334 4689998864
No 212
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.28 E-value=7.2 Score=36.83 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=47.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-----------hCC----------CeEEEEcC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-----------AGI----------SKIEITND 165 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-----------~g~----------~~i~~~~d 165 (261)
-+||++||- +++..+++..++.-|.++++.. .+++.++.+.+ .|. ..+..+.|
T Consensus 5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D-----~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (483)
T 3mog_A 5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYD-----ISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTD 78 (483)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCCEEEEC-----SCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEE-----CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCC
Confidence 368999995 8899999888888898887654 34444444332 221 14677888
Q ss_pred HHHHhCCCCEEEEec
Q 024871 166 PKEVVQGADVVYSDV 180 (261)
Q Consensus 166 ~~~a~~~aDviy~~~ 180 (261)
++ ++++||+|+.-.
T Consensus 79 ~~-~~~~aDlVIeAV 92 (483)
T 3mog_A 79 IH-ALAAADLVIEAA 92 (483)
T ss_dssp GG-GGGGCSEEEECC
T ss_pred HH-HhcCCCEEEEcC
Confidence 85 799999999865
No 213
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=80.21 E-value=5.1 Score=35.67 Aligned_cols=72 Identities=21% Similarity=0.129 Sum_probs=45.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHH---HHHHhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVE---KARKAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~---~~~~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- +.+..+++..++.-|. ++++.-.+.-.......+ .+...+ ..++..+.|. +++++||+|+...
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 369999996 8888888887777676 776665432111111111 111112 2467777888 8999999999874
No 214
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.10 E-value=12 Score=35.33 Aligned_cols=71 Identities=10% Similarity=0.144 Sum_probs=47.9
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCC---HHHHHHHHHhCC----------CeEEEEcCHHHHhCCCC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPD---KETVEKARKAGI----------SKIEITNDPKEVVQGAD 174 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~---~~~~~~~~~~g~----------~~i~~~~d~~~a~~~aD 174 (261)
.||++||- +.+..+++..++.-|.+|++.....-.-. ...++.+.+.|. ..+..+.|++ ++++||
T Consensus 55 ~kVaVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aD 132 (460)
T 3k6j_A 55 NSVAIIGG-GTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCD 132 (460)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCC
Confidence 68999995 77888998888888999887754321000 001222223331 2477888985 899999
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+.-.
T Consensus 133 lVIeAV 138 (460)
T 3k6j_A 133 LIVESV 138 (460)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999975
No 215
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=79.84 E-value=3.1 Score=39.49 Aligned_cols=71 Identities=25% Similarity=0.257 Sum_probs=45.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC-CCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG-FEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~-~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
|+|+||+++|-+ .-.|..+.=+.=-|++|++.--++ ..-.....++|++.|. ++. +++||++.||+|+...
T Consensus 35 lkgK~IaVIGyG-sQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf---~v~-~~~eA~~~ADvV~~L~ 106 (491)
T 3ulk_A 35 LQGKKVVIVGCG-AQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGF---KVG-TYEELIPQADLVINLT 106 (491)
T ss_dssp GTTSEEEEESCS-HHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTC---EEE-EHHHHGGGCSEEEECS
T ss_pred HcCCEEEEeCCC-hHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCC---Eec-CHHHHHHhCCEEEEeC
Confidence 899999999974 344444444444588887663211 1111133456777774 322 6899999999999974
No 216
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=79.74 E-value=3.4 Score=37.42 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=46.2
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHH-hcCCc-EEEEeCCCCCCCCHHHHH-HHHHh----CCCeEEEEcCHHHHhCCC
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMA-SVIPF-HFVCACPKGFEPDKETVE-KARKA----GISKIEITNDPKEVVQGA 173 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~-~~~g~-~~~~~~P~~~~~~~~~~~-~~~~~----g~~~i~~~~d~~~a~~~a 173 (261)
++...+.++|+++|- ++.+.+.+..+ ...+. ++.++.. +++-.+ .+++. | ..+..+++++++++++
T Consensus 123 ~la~~~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r-----~~~~a~~la~~~~~~~g-~~~~~~~~~~eav~~a 195 (350)
T 1x7d_A 123 ALARPNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDT-----DPLATAKLIANLKEYSG-LTIRRASSVAEAVKGV 195 (350)
T ss_dssp HHSCTTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECS-----SHHHHHHHHHHHTTCTT-CEEEECSSHHHHHTTC
T ss_pred HhccccCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcC-----CHHHHHHHHHHHHhccC-ceEEEeCCHHHHHhcC
Confidence 345567899999996 55666655443 23343 5666543 222222 23332 3 2466788999999999
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+|++-.
T Consensus 196 DiVi~aT 202 (350)
T 1x7d_A 196 DIITTVT 202 (350)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9999865
No 217
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=79.57 E-value=2.6 Score=37.62 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=43.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCC--cEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEE---EcCHHHHhCCCCEEEEe
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIP--FHFVCACPKGFEPDKETVEKARKAGI-SKIEI---TNDPKEVVQGADVVYSD 179 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g--~~~~~~~P~~~~~~~~~~~~~~~~g~-~~i~~---~~d~~~a~~~aDviy~~ 179 (261)
+..||+++|-.+.|..+++..+..-| -++++.-.+.- .....+ +..... ..+.. ++|++++++++|+|+..
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~d-L~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTAD-ISHMDTGAVVRGFLGQQQLEAALTGMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHH-HHTSCSSCEEEEEESHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHH-hhcccccceEEEEeCCCCHHHHcCCCCEEEEc
Confidence 35799999977888888877665556 56666532110 111111 122111 14444 34778999999999986
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 84 a 84 (326)
T 1smk_A 84 A 84 (326)
T ss_dssp C
T ss_pred C
Confidence 4
No 218
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=79.41 E-value=3.2 Score=36.23 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=41.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||++||..+++..+++..+...|.++++..+..- .+.+++++++|+|+.-.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~---------------------~~~~~~~~~aDvVilav 73 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW---------------------AVAESILANADVVIVSV 73 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG---------------------GGHHHHHTTCSEEEECS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc---------------------cCHHHHhcCCCEEEEeC
Confidence 58999997799999999999888988887765320 25677889999988754
No 219
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.40 E-value=2.3 Score=35.33 Aligned_cols=65 Identities=14% Similarity=0.082 Sum_probs=44.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEE-eCCCCCCCCHHHHHH-HHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVC-ACPKGFEPDKETVEK-ARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~-~~P~~~~~~~~~~~~-~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
-.||+++| .+++..+++..+...|.++++ ..+. ++..+. +++.|. .. +.+..++++++|+|+.-.
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~-----~~~~~~l~~~~g~-~~--~~~~~~~~~~aDvVilav 89 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRG-----PASLSSVTDRFGA-SV--KAVELKDALQADVVILAV 89 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTC-----GGGGHHHHHHHTT-TE--EECCHHHHTTSSEEEEES
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCC-----HHHHHHHHHHhCC-Cc--ccChHHHHhcCCEEEEeC
Confidence 36899999 689999999888888888887 4332 222222 344563 22 234456799999998864
No 220
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.31 E-value=6.1 Score=33.93 Aligned_cols=64 Identities=19% Similarity=0.208 Sum_probs=47.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|-.+++..+++..+...|.++++..+ .++..+.+.+.|. .. .++.++++++|+|+.-.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r-----~~~~~~~~~~~g~---~~-~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEI-----APEGRDRLQGMGI---PL-TDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECC-----SHHHHHHHHHTTC---CC-CCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-----CHHHHHHHHhcCC---Cc-CCHHHHhcCCCEEEEcC
Confidence 58999996588999999888888888876654 3444455555653 22 36778999999999864
No 221
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.06 E-value=11 Score=33.08 Aligned_cols=67 Identities=18% Similarity=0.129 Sum_probs=47.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCe-----------E-EEEcCHHHHhCCCCE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISK-----------I-EITNDPKEVVQGADV 175 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~-----------i-~~~~d~~~a~~~aDv 175 (261)
.||+++|- +++...++..+...|.+++++.. +++..+.+++.+.-. + ..++|++++++++|+
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDI-----DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADV 78 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCE
Confidence 68999995 78888888877778888877653 334445555542111 1 357789999999999
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
|+...
T Consensus 79 vi~~v 83 (359)
T 1bg6_A 79 ILIVV 83 (359)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 98864
No 222
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.65 E-value=5.2 Score=31.76 Aligned_cols=69 Identities=12% Similarity=0.008 Sum_probs=47.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cC---HHHH--hCCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEIT--ND---PKEV--VQGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d---~~~a--~~~aDvi 176 (261)
+.+.+|+++| .+++...++..+... |.+++++.. +++..+.+++.|. .+..- .+ ++++ ++++|+|
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~-----~~~~~~~~~~~g~-~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEI-----REEAAQQHRSEGR-NVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES-----CHHHHHHHHHTTC-CEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC-----CHHHHHHHHHCCC-CEEEcCCCCHHHHHhccCCCCCCEE
Confidence 5678999999 588999999888887 888887754 3455556666663 33221 12 3444 7889999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 110 i~~~ 113 (183)
T 3c85_A 110 LLAM 113 (183)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9853
No 223
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.29 E-value=4.2 Score=33.05 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=46.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hC----CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AG----ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g----~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|-.+++...++..+...|.++++.... ++..+.+.+ .+ ...+. ..+++++++++|+|+...
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence 379999966899999998888888888876542 222222222 12 01344 467889999999999864
No 224
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=78.27 E-value=5.4 Score=35.45 Aligned_cols=108 Identities=7% Similarity=-0.025 Sum_probs=60.6
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhc-CCc-EEEEeCCCCCCCCHHHHH-HHHHhC--CCeEEEEcCHHHHhCCCCE
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASV-IPF-HFVCACPKGFEPDKETVE-KARKAG--ISKIEITNDPKEVVQGADV 175 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~-~g~-~~~~~~P~~~~~~~~~~~-~~~~~g--~~~i~~~~d~~~a~~~aDv 175 (261)
++..-+.++++++|- +.++++.+..+.. .+. ++.++... ++-.+ .+++.+ ...+. .+|+++++ ++|+
T Consensus 119 ~la~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~-----~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDv 190 (322)
T 1omo_A 119 YLARKNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVR-----EKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDV 190 (322)
T ss_dssp HHSCTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSE
T ss_pred hccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCC-----HHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCE
Confidence 345567899999996 5666666655443 344 55555432 22222 222221 01356 78999999 9999
Q ss_pred EEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeCCCCCC-Cccccccccc
Q 024871 176 VYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHCLPAER-GVEVTEGVIE 234 (261)
Q Consensus 176 iy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~lP~~r-g~Ev~~~v~~ 234 (261)
|++-+-. .. ++ ++.+ ..+++..+....+-.. -.|++++++.
T Consensus 191 Vi~aTp~--~~------------pv-~~~~---~l~~G~~V~~ig~~~p~~~el~~~~~~ 232 (322)
T 1omo_A 191 LVTTTPS--RK------------PV-VKAE---WVEEGTHINAIGADGPGKQELDVEILK 232 (322)
T ss_dssp EEECCCC--SS------------CC-BCGG---GCCTTCEEEECSCCSTTCCCBCHHHHH
T ss_pred EEEeeCC--CC------------ce-ecHH---HcCCCeEEEECCCCCCCccccCHHHHh
Confidence 9997521 11 11 2322 2356667776654322 2577765554
No 225
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.43 E-value=4.3 Score=38.24 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCCCcEEEEEcCC-----Cc----hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC---------CeEEEEcC
Q 024871 104 RLEGTKVVYVGDG-----NN----IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI---------SKIEITND 165 (261)
Q Consensus 104 ~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~---------~~i~~~~d 165 (261)
.++|+||++.|=. .. -+..++..+...|.++.+.-|.. .++..+ .++. ..+.+.++
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 398 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVA---QEEARR---VIALDLADHPSWLERLSFVDD 398 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTT---HHHHHH---HHHHHTTTCHHHHTTEEECSS
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCc---cHHHHH---hhccccccccccccceeecCC
Confidence 5899999999931 12 34456677777899999888852 122111 1110 13677889
Q ss_pred HHHHhCCCCEEEE-ecccC
Q 024871 166 PKEVVQGADVVYS-DVWAS 183 (261)
Q Consensus 166 ~~~a~~~aDviy~-~~w~~ 183 (261)
+++++++||+|.. +.|..
T Consensus 399 ~~~~~~~ad~~vi~t~~~~ 417 (478)
T 2y0c_A 399 EAQAARDADALVIVTEWKI 417 (478)
T ss_dssp HHHHTTTCSEEEECSCCGG
T ss_pred HHHHHhCCCEEEEecCChH
Confidence 9999999999854 56753
No 226
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=76.86 E-value=2.7 Score=37.24 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=42.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHHhC--CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARKAG--ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~g--~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- +.+..|++..+..-|. ++++.-.+.-.......+...... ...++++.+..+++++||+|+...
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA 82 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECC
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcC
Confidence 479999996 8888888877655453 677664421001111112222111 013444456678999999998864
No 227
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=76.73 E-value=3.3 Score=34.59 Aligned_cols=59 Identities=10% Similarity=0.079 Sum_probs=41.4
Q ss_pred CCCCCcEEEEEcCCC------chHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEE
Q 024871 103 GRLEGTKVVYVGDGN------NIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVV 176 (261)
Q Consensus 103 g~l~~~~i~~vGd~~------~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDvi 176 (261)
..++|.+|+||.-.. .-.+|...+...+|+++....... .+ .+++.+.+++||.|
T Consensus 23 ~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~--~~-----------------~~~~~~~l~~ad~I 83 (206)
T 3l4e_A 23 SNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT--ES-----------------LGEITTKLRKNDFI 83 (206)
T ss_dssp CCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT--SC-----------------HHHHHHHHHHSSEE
T ss_pred HHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC--CC-----------------hHHHHHHHHhCCEE
Confidence 568899999997432 367899999999999877653211 00 12344678899999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
|...
T Consensus 84 ~l~G 87 (206)
T 3l4e_A 84 YVTG 87 (206)
T ss_dssp EECC
T ss_pred EECC
Confidence 9874
No 228
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=76.07 E-value=6.4 Score=38.16 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=55.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEE--EEeCCCCC--C-CCHHHHHHHHHhCCCeEEEEcCH-----HHHhC--CCCE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHF--VCACPKGF--E-PDKETVEKARKAGISKIEITNDP-----KEVVQ--GADV 175 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~--~~~~P~~~--~-~~~~~~~~~~~~g~~~i~~~~d~-----~~a~~--~aDv 175 (261)
+||+++|-..--++++-.+.. -+.++ ++..|+.- . .+..+.+.|+++|+..+ ..++. .+.++ +.|+
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~-~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~-~~~~~~~~~~~~~l~~~~~d~ 78 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLA-AGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVY-APDNVNHPLWVERIAQLSPDV 78 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-TTCEEEEEECCCC--------CCHHHHHHHHTCCEE-CCSCTTSHHHHHHHHHHCCSE
T ss_pred CEEEEEEeCHHHHHHHHHHHh-CCCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEe-ccCCCCcHHHHHHHHhcCCCE
Confidence 479999953222333322222 25554 33334321 0 11235677888886433 22222 12232 6788
Q ss_pred EEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 176 VYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 176 iy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
|..-.|. ..|.+++++..+..++-+|| ||.+||
T Consensus 79 iv~~~~~-----------------~il~~~~l~~~~~~~iNiH~slLP~~rG 113 (660)
T 1z7e_A 79 IFSFYYR-----------------HLIYDEILQLAPAGAFNLHGSLLPKYRG 113 (660)
T ss_dssp EEEESCC-----------------SCCCHHHHTTCTTCEEEEESSSTTTTCS
T ss_pred EEEcCcc-----------------cccCHHHHhcCCCCeEEecCCcCCCCCC
Confidence 8876542 34788888887778999999 799885
No 229
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=75.49 E-value=28 Score=30.60 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=28.5
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|..-.|. ..+++++++..+..++=+|| ||.+||
T Consensus 171 ~~Dlivla~y~-----------------~il~~~~l~~~~~~~iNiHpSlLP~~rG 209 (292)
T 3lou_A 171 GAELVILARYM-----------------QVLSPEASARLANRAINIHHSFLPGFKG 209 (292)
T ss_dssp TCSEEEESSCC-----------------SCCCHHHHHHTTTSEEEEEEECSSCCCS
T ss_pred CCCEEEecCch-----------------hhCCHHHHhhhcCCeEEeCCCcCcCCCC
Confidence 56777776542 34788888888888999999 899885
No 230
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=75.44 E-value=3.9 Score=36.74 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=45.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC-------cEEEEeCCCCCCCCHHHHHHHHHhC-----------CCeEEEEcCHHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP-------FHFVCACPKGFEPDKETVEKARKAG-----------ISKIEITNDPKEV 169 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g-------~~~~~~~P~~~~~~~~~~~~~~~~g-----------~~~i~~~~d~~~a 169 (261)
.||+++|- +++..+++..+..-| .++++.....-.-.+...+..++.+ ...+..++|++++
T Consensus 22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 22 LKISILGS-GNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 58999995 778888776665555 6777765432100000223333321 0246778899999
Q ss_pred hCCCCEEEEec
Q 024871 170 VQGADVVYSDV 180 (261)
Q Consensus 170 ~~~aDviy~~~ 180 (261)
++++|+|+.-.
T Consensus 101 ~~~aDvVilav 111 (375)
T 1yj8_A 101 INDADLLIFIV 111 (375)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEEcC
Confidence 99999998864
No 231
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=74.86 E-value=10 Score=35.09 Aligned_cols=69 Identities=13% Similarity=0.101 Sum_probs=41.7
Q ss_pred CcEEEEEcCCCchHHHHHHHH----hcC-CcEEEEeCCCCCCCCHHHHH----HHHH--hCCCeEEEEcCHHHHhCCCCE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMA----SVI-PFHFVCACPKGFEPDKETVE----KARK--AGISKIEITNDPKEVVQGADV 175 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~----~~~-g~~~~~~~P~~~~~~~~~~~----~~~~--~g~~~i~~~~d~~~a~~~aDv 175 (261)
..||+++|.++-....++..+ ..+ +-++++.-- +++.++ .+.. ....++..+.|.+++++|||+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di-----~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~ 76 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDI-----DEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKY 76 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECS-----CHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeC-----CHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCE
Confidence 469999998653444443222 234 457777643 333222 2221 111467767898899999999
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
|+...
T Consensus 77 Viita 81 (417)
T 1up7_A 77 VIFQF 81 (417)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99975
No 232
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=74.30 E-value=19 Score=33.65 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=50.3
Q ss_pred CCCCcEEEEEc--------CCCc-hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hCC----CeEEEEcCHHHH
Q 024871 104 RLEGTKVVYVG--------DGNN-IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AGI----SKIEITNDPKEV 169 (261)
Q Consensus 104 ~l~~~~i~~vG--------d~~~-v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g~----~~i~~~~d~~~a 169 (261)
.++|+||++.| |..+ -+..++..+...|.++.+.-|.- ..++..+..++ .+. ..+++.++++++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKV--QKSQMLNDLASVTSAQDVERLITVESDPYAA 409 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSS--CHHHHHHHHHHHSCHHHHHHHEEEESSHHHH
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCC--CchhhHHHHHhhhccccccCceeecCCHHHH
Confidence 48999999999 3222 45556777777899998887742 12222222222 110 136777899999
Q ss_pred hCCCCEEEEe-cccC
Q 024871 170 VQGADVVYSD-VWAS 183 (261)
Q Consensus 170 ~~~aDviy~~-~w~~ 183 (261)
+++||+|... .|..
T Consensus 410 ~~~ad~~vi~t~~~~ 424 (481)
T 2o3j_A 410 ARGAHAIVVLTEWDE 424 (481)
T ss_dssp HTTCSEEEECSCCGG
T ss_pred HcCCCEEEEcCCcHH
Confidence 9999997765 4743
No 233
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=74.20 E-value=9.6 Score=33.63 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=40.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC--cEEEEeCCCCCCCCHHHHHHHHH---hC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP--FHFVCACPKGFEPDKETVEKARK---AG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g--~~~~~~~P~~~~~~~~~~~~~~~---~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++| .++|..+++.++..-+ -+++++--..-...-+.+|.... .+ ..++.-+.|. +++++||+|+.+.
T Consensus 1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-HHhCCCCEEEEec
Confidence 4899999 5888877766554333 36776642210111122222221 11 2345556664 5899999998864
No 234
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=74.14 E-value=26 Score=30.69 Aligned_cols=26 Identities=23% Similarity=0.222 Sum_probs=21.7
Q ss_pred cccHHHHHhcCCCcEEeeC--CCCCCCc
Q 024871 201 QVDEFLMKLAGPKAYFMHC--LPAERGV 226 (261)
Q Consensus 201 ~v~~~~~~~a~~~~~~mH~--lP~~rg~ 226 (261)
.+++++++..+..++=+|| ||.+||-
T Consensus 178 il~~~~l~~~~~~~iNiHpSlLP~~rG~ 205 (286)
T 3n0v_A 178 VLSPELCRRLDGWAINIHHSLLPGFKGA 205 (286)
T ss_dssp CCCHHHHHHTTTSEEEEEECSSTTCCCS
T ss_pred ccCHHHHhhhcCCeEEeccccccCCCCc
Confidence 4788888888888999999 8998853
No 235
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=73.93 E-value=6.1 Score=32.52 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=27.1
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
.+.+.||+++| .+++..+++..+...|.++++..+
T Consensus 16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECT
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcC
Confidence 37889999999 689999999988888988887754
No 236
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=73.91 E-value=6.4 Score=36.75 Aligned_cols=67 Identities=9% Similarity=0.168 Sum_probs=45.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHHHH----------------HHhCCCeEEEEcCHHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVEKA----------------RKAGISKIEITNDPKEV 169 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~~~----------------~~~g~~~i~~~~d~~~a 169 (261)
.||+++| .+++..+++..++.. |.++++... +++.++.+ ++.....+..+.|++++
T Consensus 6 mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~-----~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~ 79 (467)
T 2q3e_A 6 KKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDV-----NESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDA 79 (467)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECS-----CHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHH
T ss_pred cEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEEC-----CHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHH
Confidence 5899999 588888887777666 788876643 22222221 11100247788999999
Q ss_pred hCCCCEEEEec
Q 024871 170 VQGADVVYSDV 180 (261)
Q Consensus 170 ~~~aDviy~~~ 180 (261)
++++|+|+.-.
T Consensus 80 ~~~aDvViiaV 90 (467)
T 2q3e_A 80 IKEADLVFISV 90 (467)
T ss_dssp HHHCSEEEECC
T ss_pred HhcCCEEEEEc
Confidence 99999998753
No 237
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=73.57 E-value=9.7 Score=33.46 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=47.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCC--------eEEEEcCHHHHhCCCCEEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGIS--------KIEITNDPKEVVQGADVVYS 178 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~--------~i~~~~d~~~a~~~aDviy~ 178 (261)
-.||+++|- +++...++..+..-|.++++.... ++..+.+++.|.. .+..++|+++ ++++|+|+.
T Consensus 14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~-----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil 86 (335)
T 1z82_A 14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARR-----KEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVI 86 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEE
T ss_pred CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEE
Confidence 379999995 788888887777778888877642 3334445555410 2466788888 999999888
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
-.
T Consensus 87 ~v 88 (335)
T 1z82_A 87 AI 88 (335)
T ss_dssp CS
T ss_pred EC
Confidence 64
No 238
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=73.40 E-value=35 Score=30.20 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=28.5
Q ss_pred CCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 172 GADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 172 ~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
+.|+|..-.|. ..+++++++..+..++=+|| ||.+||
T Consensus 181 ~~DliVlagym-----------------~IL~~~~l~~~~~~~INiHpSlLP~frG 219 (302)
T 3o1l_A 181 QADVVVLARYM-----------------QILPPQLCREYAHQVINIHHSFLPSFVG 219 (302)
T ss_dssp TCSEEEESSCC-----------------SCCCTTHHHHTTTCEEEEESSCTTSSCS
T ss_pred CCCEEEHhHhh-----------------hhcCHHHHhhhhCCeEEeCcccccCCCC
Confidence 56777776542 34788888888888999999 899885
No 239
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=73.12 E-value=15 Score=34.68 Aligned_cols=68 Identities=13% Similarity=0.049 Sum_probs=48.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC--CCeEEEEcCHHHHhC---CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG--ISKIEITNDPKEVVQ---GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g--~~~i~~~~d~~~a~~---~aDviy~~~ 180 (261)
..+|++|| .+++..+++..+...|.++++..+ +++.++.+.+.+ ...+..+.+++++++ ++|+|+.-.
T Consensus 4 ~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr-----~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 4 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNR-----TVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-----STHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECS
T ss_pred CCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEec
Confidence 46899999 588999998888888988776643 334445554432 134556789999876 599988754
No 240
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=73.09 E-value=8.9 Score=33.69 Aligned_cols=71 Identities=14% Similarity=0.112 Sum_probs=44.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhc--CCcEEEEeCCCCCCCCHHHHHHHH---HhC-CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASV--IPFHFVCACPKGFEPDKETVEKAR---KAG-ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~--~g~~~~~~~P~~~~~~~~~~~~~~---~~g-~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- +++..+++..++. +|.++++...+.-.......+..+ ..+ ..++..+.|.++ +++||+|+...
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeC
Confidence 48999996 8888888776665 577888876543111111001111 111 235777788876 99999998864
No 241
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=73.06 E-value=8.9 Score=36.06 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=49.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh-CCCeEEEEcCHHHHhCC---CCEEEEe
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA-GISKIEITNDPKEVVQG---ADVVYSD 179 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~-g~~~i~~~~d~~~a~~~---aDviy~~ 179 (261)
....++|+++| .+++..+++..+..-|.++++... .++.++.+.+. +...+..+.|+++++++ +|+|+.-
T Consensus 12 ~~~~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~~r-----~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 12 HMSKQQIGVVG-MAVMGRNLALNIESRGYTVSIFNR-----SREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp ---CBSEEEEC-CSHHHHHHHHHHHTTTCCEEEECS-----SHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEEC
T ss_pred ccCCCeEEEEc-cHHHHHHHHHHHHhCCCeEEEEeC-----CHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEE
Confidence 35678999999 588899998888888888776643 34444444433 11236778899999887 9999886
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 86 V 86 (480)
T 2zyd_A 86 V 86 (480)
T ss_dssp S
T ss_pred C
Confidence 4
No 242
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=72.95 E-value=20 Score=31.14 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=52.1
Q ss_pred HHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc--C-HHHHhCCCCEE
Q 024871 100 EHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN--D-PKEVVQGADVV 176 (261)
Q Consensus 100 e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~--d-~~~a~~~aDvi 176 (261)
+..+--.|.+|++.|..+.+....+.++..+|.+++..+. ++-.+.+++.|...+.-++ + ..+.++++|++
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~------~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v 219 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS------KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAV 219 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC------HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec------cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEE
Confidence 4334457899999987788999999999999998776542 1225678888854332222 3 56667889998
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-..
T Consensus 220 ~d~~ 223 (321)
T 3tqh_A 220 IDLV 223 (321)
T ss_dssp EESS
T ss_pred EECC
Confidence 8653
No 243
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=72.92 E-value=6 Score=37.51 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=80.0
Q ss_pred HHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCChh----HHH
Q 024871 17 ETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPC----QIM 92 (261)
Q Consensus 17 e~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPt----Q~L 92 (261)
..=...+|..++.+ +..|-|++|..+.=.+-+.+++-+.......+.+.+.-++|.|...--+-..| +.|
T Consensus 239 k~lL~~~Gi~v~~~------~~g~~t~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~p~G~~~T~~~L~~i 312 (492)
T 3u7q_A 239 RILLEEMGLRCVAQ------WSGDGSISEIELTPKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYNFFGPTKTIESLRAI 312 (492)
T ss_dssp HHHHHHTTCEEEEE------EETTCCHHHHHHGGGCSEEEESCHHHHHHHHHHHHHHHCCCEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEE------eCCCCCHHHHHhhhcCcEEEEEChHHHHHHHHHHHHHhCCceEecCccCHHHHHHHHHHH
Confidence 33456778877653 12356677776654444444332222334455666667899887421011111 111
Q ss_pred HHHHH----------HH----------H-HhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHH
Q 024871 93 ADALT----------II----------E-HVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEK 151 (261)
Q Consensus 93 ~Dl~T----------i~----------e-~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~ 151 (261)
++++- |. + ....|.|+|+++.||.. -+.+++..+.-+|++++.++.+.- ..+..+.
T Consensus 313 a~~~g~~~~~~~e~~i~~e~~~~~~~l~~~~~~l~GKrv~i~g~~~-~~~~la~~L~ElGm~vv~~gt~~~--~~~d~~~ 389 (492)
T 3u7q_A 313 AAKFDESIQKKCEEVIAKYKPEWEAVVAKYRPRLEGKRVMLYIGGL-RPRHVIGAYEDLGMEVVGTGYEFA--HNDDYDR 389 (492)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECBSSS-HHHHTHHHHHTTTCEEEEEEESSC--CHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCc-hHHHHHHHHHHCCCEEEEEeCCCC--CHHHHHH
Confidence 11110 11 1 11238899999999965 467787788889999887653321 2333333
Q ss_pred HHHh-CCCeEEEEc-CHH---HHhC--CCCEEEEec
Q 024871 152 ARKA-GISKIEITN-DPK---EVVQ--GADVVYSDV 180 (261)
Q Consensus 152 ~~~~-g~~~i~~~~-d~~---~a~~--~aDviy~~~ 180 (261)
..+. +...+.+.+ |+. +.++ +.|+++...
T Consensus 390 l~~~~~~~~~i~~~~d~~el~~~i~~~~pDL~ig~~ 425 (492)
T 3u7q_A 390 TMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSGI 425 (492)
T ss_dssp HHTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEECH
T ss_pred HHHhCCCCcEEEcCCCHHHHHHHHHhcCCcEEEeCc
Confidence 3332 212222221 333 3333 578888863
No 244
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=72.76 E-value=36 Score=28.10 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCCh-
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHP- 88 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HP- 88 (261)
+-...++.++.++|.+++..+.... .+...+..+.+ ++-+|.|++-........+..+..++|||..+....++
T Consensus 24 ~~~~gi~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~l~~~~iPvV~i~~~~~~~~ 99 (276)
T 3jy6_A 24 ELFKGISSILESRGYIGVLFDANAD----IEREKTLLRAIGSRGFDGLILQSFSNPQTVQEILHQQMPVVSVDREMDACP 99 (276)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECTTC----HHHHHHHHHHHHTTTCSEEEEESSCCHHHHHHHHTTSSCEEEESCCCTTCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCC----HHHHHHHHHHHHhCCCCEEEEecCCcHHHHHHHHHCCCCEEEEecccCCCC
Confidence 4456788999999999887754311 12223344443 44589888876554333444456799988754332222
Q ss_pred -hHHHHHHH----HHHHHhCCCCCcEEEEEcCC
Q 024871 89 -CQIMADAL----TIIEHVGRLEGTKVVYVGDG 116 (261)
Q Consensus 89 -tQ~L~Dl~----Ti~e~~g~l~~~~i~~vGd~ 116 (261)
..+..|-+ .+-+++-..-..+|++++..
T Consensus 100 ~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~ 132 (276)
T 3jy6_A 100 WPQVVTDNFEAAKAATTAFRQQGYQHVVVLTSE 132 (276)
T ss_dssp SCEEECCHHHHHHHHHHHHHTTTCCEEEEEEEC
T ss_pred CCEEEEChHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 11222211 12233333335799999864
No 245
>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI038; APC63004, methylase family protein, haemophilus influenzae R structural genomics; 2.01A {Haemophilus influenzae}
Probab=72.72 E-value=5.1 Score=34.52 Aligned_cols=72 Identities=19% Similarity=0.282 Sum_probs=50.6
Q ss_pred CCCCcEEEEEcC--CCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEcCHHHHhCCCCEE
Q 024871 104 RLEGTKVVYVGD--GNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGI----SKIEITNDPKEVVQGADVV 176 (261)
Q Consensus 104 ~l~~~~i~~vGd--~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~----~~i~~~~d~~~a~~~aDvi 176 (261)
-++++.|+.++- +.|+. +.+..|..||+ .++++.|. .+.++.+.. ..|. ..+.+.++++++++++..|
T Consensus 4 ~l~~l~vVL~~~~dP~NiG-ai~Rta~a~G~~~l~lv~p~--~~~~~a~r~--A~GA~~~l~~~~~~~~l~eal~~~~~v 78 (244)
T 3ilk_A 4 MLENIRIVLIETSHSGNIG-SAARAMKTMGLTQLCLVSPK--SVDEQSYAL--SAGAENIVKNARVVDSFDEAVDDCSLV 78 (244)
T ss_dssp SSTTEEEEEESCCSHHHHH-HHHHHHHHHTCCEEEEESCS--CCSHHHHHT--TTTCHHHHHHCEEESSHHHHTTTCSEE
T ss_pred cccCcEEEEECCCCcChHH-HHHHHHHHhCCCEEEEECCC--CCCHHHHHH--cCChhheeceeEEeCCHHHHHHhCCeE
Confidence 367889999984 45655 67778888998 78888887 455554322 1231 1345678999999999988
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
|.+.
T Consensus 79 vatt 82 (244)
T 3ilk_A 79 IGTS 82 (244)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8764
No 246
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=72.70 E-value=7.7 Score=30.06 Aligned_cols=63 Identities=21% Similarity=0.136 Sum_probs=45.8
Q ss_pred CCCcEEEEEcCC---CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDG---NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
++-++|++||-. +++.+.++.-+...|++++.+.|+.-.. .| +..+.++++..+.+|+++.-.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------~G---~~~~~s~~el~~~vDlvii~v 77 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------EG---LKCYRSVRELPKDVDVIVFVV 77 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------TT---EECBSSGGGSCTTCCEEEECS
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------CC---eeecCCHHHhCCCCCEEEEEe
Confidence 567899999963 5677777766667788999888864111 13 466889999989999988864
No 247
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=72.69 E-value=8.2 Score=35.60 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=44.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHH----HhCCCeEEEEc----CHHHHhC--CC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKAR----KAGISKIEITN----DPKEVVQ--GA 173 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~----~~g~~~i~~~~----d~~~a~~--~a 173 (261)
-+.+||++||- +++.+..+..+... +++++-++-. +++..+.+. +.|......+. |.++.++ +.
T Consensus 18 ~~~~rvgiIG~-G~~g~~h~~~l~~~~~~~lvav~d~----~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~v 92 (444)
T 2ixa_A 18 PKKVRIAFIAV-GLRGQTHVENMARRDDVEIVAFADP----DPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNI 92 (444)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECS----CHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTC
T ss_pred CCCceEEEEec-CHHHHHHHHHHHhCCCcEEEEEEeC----CHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCC
Confidence 35689999995 66666666666555 6787755532 233333222 34532345677 9999997 58
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+|+.-.
T Consensus 93 D~V~i~t 99 (444)
T 2ixa_A 93 DAVFVSS 99 (444)
T ss_dssp CEEEECC
T ss_pred CEEEEcC
Confidence 9888754
No 248
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=72.51 E-value=4.5 Score=35.83 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=40.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC--cEEEEeCCCCCCCCHHHHH-HHHH--hC---CCeEEEEcCHHHHhCCCCEEEEe
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP--FHFVCACPKGFEPDKETVE-KARK--AG---ISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g--~~~~~~~P~~~~~~~~~~~-~~~~--~g---~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
.||+++|- ++|..+++..+..-+ -++++.-- +++.++ .+.+ .+ ...+.++.+..+++++||+|+..
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-----~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ 74 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDL-----DRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLA 74 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-----SHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-----ChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEEC
Confidence 48999996 888888877665544 36666643 232222 1221 11 01233333458899999999886
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 75 a 75 (310)
T 2xxj_A 75 A 75 (310)
T ss_dssp C
T ss_pred C
Confidence 4
No 249
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=74.88 E-value=0.75 Score=38.20 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=45.1
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+...++||+++| .+++..+++..+...|.++++..+..- . +.+.+.| +... +++++++++|+|+.-.
T Consensus 15 ~~~~~~~I~iIG-~G~mG~~la~~L~~~G~~V~~~~r~~~--~----~~~~~~g---~~~~-~~~~~~~~aDvVilav 81 (201)
T 2yjz_A 15 SSEKQGVVCIFG-TGDFGKSLGLKMLQCGYSVVFGSRNPQ--V----SSLLPRG---AEVL-CYSEAASRSDVIVLAV 81 (201)
Confidence 336678999999 478888888877777888777655321 1 1122233 2334 6788899999988753
No 250
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=72.29 E-value=7.2 Score=36.12 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCC-CCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQG-ADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~-aDviy~~~ 180 (261)
.++|+||.++|= +.+..|.+..+...|.+|+..-.+....+ ...+.+++.|+ .+..-++.++.+++ +|+|+..+
T Consensus 6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~-~~~~~L~~~gi-~~~~g~~~~~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDEN-PTAQSLLEEGI-KVVCGSHPLELLDEDFCYMIKNP 80 (451)
T ss_dssp TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGC-HHHHHHHHTTC-EEEESCCCGGGGGSCEEEEEECT
T ss_pred hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCC-hHHHHHHhCCC-EEEECCChHHhhcCCCCEEEECC
Confidence 478999999995 66777888888899999887644332222 33456667774 56666666666676 89877764
No 251
>3onp_A TRNA/RRNA methyltransferase (SPOU); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.90A {Rhodobacter sphaeroides}
Probab=72.07 E-value=6 Score=34.12 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=48.2
Q ss_pred CcEEEEEcC--CCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEcCHHHHhCCCCEEEEe
Q 024871 107 GTKVVYVGD--GNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGI----SKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 107 ~~~i~~vGd--~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~----~~i~~~~d~~~a~~~aDviy~~ 179 (261)
++.|+.++- +.|+. +.+.++..||+ +++++.|..-.+.++.... ..|. ..+++.+++++++++++.+|.+
T Consensus 4 ~~~vVL~~~~dP~NiG-ai~Rta~a~G~~~l~Lv~p~~~~~~~~a~~~--a~GA~~~l~~~~~~~~l~eal~~~~~v~at 80 (249)
T 3onp_A 4 EPVFILVRPQMGENIG-AAARAMLNFGLGRLRIVDPRDGWPNPKAVAM--ASGAGRLLDHAGLFPTVAEAIRDCDYVFAT 80 (249)
T ss_dssp CCEEEEESCCCHHHHH-HHHHHHHHTTCCCEEEESCTTCSSCHHHHHH--HGGGHHHHHTCEEESSHHHHHTTCSEEEEE
T ss_pred ceEEEEeCCCCCChHH-HHHHHHHHcCCCEEEEeCCCcCCCcHHHHHH--cCCccccCceEEEeCCHHHHHHhCCeEEEE
Confidence 467788884 45655 67788889998 7888888732234444332 2331 2356678999999999988776
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 81 t 81 (249)
T 3onp_A 81 T 81 (249)
T ss_dssp E
T ss_pred c
Confidence 4
No 252
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=71.99 E-value=5.9 Score=37.47 Aligned_cols=70 Identities=21% Similarity=0.155 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-Cc-EEEEeCCCCC-------------------CCC-HHHHHHHHHhCCCeEEEEc
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PF-HFVCACPKGF-------------------EPD-KETVEKARKAGISKIEITN 164 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~-~~~~~~P~~~-------------------~~~-~~~~~~~~~~g~~~i~~~~ 164 (261)
-.||+++|- +.+...++..++.. |. ++++.....- ++. +++++..... +.+..++
T Consensus 18 ~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~--g~l~~tt 94 (478)
T 3g79_A 18 IKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKA--GKFECTP 94 (478)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHT--TCEEEES
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhccc--CCeEEeC
Confidence 369999994 77888888877777 88 8887764321 111 1111111123 3588888
Q ss_pred CHHHHhCCCCEEEEec
Q 024871 165 DPKEVVQGADVVYSDV 180 (261)
Q Consensus 165 d~~~a~~~aDviy~~~ 180 (261)
| .+++++||+|+.-.
T Consensus 95 d-~ea~~~aDvViiaV 109 (478)
T 3g79_A 95 D-FSRISELDAVTLAI 109 (478)
T ss_dssp C-GGGGGGCSEEEECC
T ss_pred c-HHHHhcCCEEEEec
Confidence 8 78999999999854
No 253
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=71.67 E-value=7.7 Score=34.64 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=46.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+.+||++||- +++.+..+..+... +++++-++- .+++..+.+++.|. ..++|.++.++ +.|+|+.-.
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d----~~~~~~~~a~~~g~---~~~~~~~~ll~~~~~D~V~i~t 73 (359)
T 3e18_A 4 KKYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFD----ILAEKREAAAQKGL---KIYESYEAVLADEKVDAVLIAT 73 (359)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEEC----SSHHHHHHHHTTTC---CBCSCHHHHHHCTTCCEEEECS
T ss_pred CcCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEc----CCHHHHHHHHhcCC---ceeCCHHHHhcCCCCCEEEEcC
Confidence 4589999996 66777777666666 678775543 23444455556663 45789999987 789988754
No 254
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=70.96 E-value=16 Score=30.17 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCChh
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPC 89 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPt 89 (261)
+-...++.++..+|.+++.++.... .+...+..+.+ ++-+|.|++-......+....+..++|||-.+.....+.
T Consensus 25 ~~~~gi~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~~~~~~ 100 (277)
T 3e61_A 25 LIARGVEDVALAHGYQVLIGNSDND----IKKAQGYLATFVSHNCTGMISTAFNENIIENTLTDHHIPFVFIDRINNEHN 100 (277)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTTC----HHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGCC----
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCC----HHHHHHHHHHHHhCCCCEEEEecCChHHHHHHHHcCCCCEEEEeccCCCCC
Confidence 3456788999999999887654321 12223344433 455899998653333333045567999998654433333
Q ss_pred HHHHHHHHH----HHHhCCCCCcEEEEEcCCCc--h----HHHHHHHHhcCCcEEE
Q 024871 90 QIMADALTI----IEHVGRLEGTKVVYVGDGNN--I----VHSWLLMASVIPFHFV 135 (261)
Q Consensus 90 Q~L~Dl~Ti----~e~~g~l~~~~i~~vGd~~~--v----~~S~~~~~~~~g~~~~ 135 (261)
.+..|-+.. -+++...-..+|++++.... . ...+...+...|..+.
T Consensus 101 ~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~ 156 (277)
T 3e61_A 101 GISTNHFKGGQLQAEVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQRIDYK 156 (277)
T ss_dssp -----HHHHHHHHHHHHHHTTCCSEEEEESCTTSHHHHHHHHHHHHHHHC---CEE
T ss_pred eEEechHHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHcCCCcc
Confidence 566664433 23332233478999975322 2 2334555666676544
No 255
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=70.91 E-value=22 Score=33.60 Aligned_cols=68 Identities=12% Similarity=0.025 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-h-CCCeEEEEcCHHHHhCC---CCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-A-GISKIEITNDPKEVVQG---ADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~-g~~~i~~~~d~~~a~~~---aDviy~~~ 180 (261)
..+|+++| .+++..+++..+..-|.++++... .++.++.+.+ . +...+..+.|+++++++ +|+|+.-.
T Consensus 10 ~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~dr-----~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~V 82 (497)
T 2p4q_A 10 SADFGLIG-LAVMGQNLILNAADHGFTVCAYNR-----TQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLV 82 (497)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-----SSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECC
T ss_pred CCCEEEEe-eHHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEc
Confidence 36899999 588888888888788888776643 2334444444 2 10236678899998877 99998864
No 256
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=70.61 E-value=6 Score=33.62 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=43.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|- +++...++..+.. |.++++..+. ++..+.+.+.|. ..++ ++++++++|+|+.-.
T Consensus 2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~-----~~~~~~~~~~g~---~~~~-~~~~~~~~D~vi~~v 63 (289)
T 2cvz_A 2 EKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRT-----FEKALRHQEEFG---SEAV-PLERVAEARVIFTCL 63 (289)
T ss_dssp CCEEEECC-STTHHHHHHHHHT-TSCEEEECSS-----THHHHHHHHHHC---CEEC-CGGGGGGCSEEEECC
T ss_pred CeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHHCCC---cccC-HHHHHhCCCEEEEeC
Confidence 47999994 7888888888778 9888776542 233344444453 2344 778899999999864
No 257
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=70.55 E-value=42 Score=27.34 Aligned_cols=124 Identities=13% Similarity=0.133 Sum_probs=66.3
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCC--cchHHHHhhhCCCcEEeCCCCCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFG--HQDILDLAKFATVPVINGLTDYNH 87 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~--~~~~~~~a~~~~vPVINa~~~~~H 87 (261)
+-.-.++.++..+|.+++.++... ..+...+..+.+ ++-+|.|++-... .....+..+..++|||-.+....+
T Consensus 19 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~ 94 (272)
T 3o74_A 19 RIAKQLEQGARARGYQLLIASSDD----QPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDP 94 (272)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC----CHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCCCc
Confidence 345678889999999988775431 112223344433 4458988886443 233444456679998875443222
Q ss_pred h--hHHHHHH----HHHHHHhCCCCCcEEEEEcCCC--chH----HHHHHHHhcCCcEEEEeC
Q 024871 88 P--CQIMADA----LTIIEHVGRLEGTKVVYVGDGN--NIV----HSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 88 P--tQ~L~Dl----~Ti~e~~g~l~~~~i~~vGd~~--~v~----~S~~~~~~~~g~~~~~~~ 138 (261)
+ ..+..|- ..+-+++-..-..+|++++... ... ..+...+...|.+.....
T Consensus 95 ~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~ 157 (272)
T 3o74_A 95 AHFCSVISDDRDASRQLAASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQ 157 (272)
T ss_dssp TTCEEEEECHHHHHHHHHHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccCEEEEchHHHHHHHHHHHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheee
Confidence 2 0111221 1222333333348999997532 222 234455666677655443
No 258
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=69.90 E-value=14 Score=34.30 Aligned_cols=74 Identities=22% Similarity=0.344 Sum_probs=50.4
Q ss_pred CCCCCcEEEEEcCC-----Cc----hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCC
Q 024871 103 GRLEGTKVVYVGDG-----NN----IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGA 173 (261)
Q Consensus 103 g~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~a 173 (261)
+.++|+||++.|=. .. -+..++..+...|.++.+.-|.-. ++. -+.+| ..+++.+++++++++|
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~---~~~---~~~~~-~~~~~~~~~~~~~~~a 386 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM---KEA---QKRLG-DKVEYTTDMYDAVRGA 386 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH---HHH---HHHHG-GGSEECSSHHHHTTTC
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCc---HHH---HHhcC-ccceecCCHHHHhcCC
Confidence 35899999999931 12 345566777778999998888531 111 11234 2467788999999999
Q ss_pred CEEEEe-cccC
Q 024871 174 DVVYSD-VWAS 183 (261)
Q Consensus 174 Dviy~~-~w~~ 183 (261)
|+|... .|..
T Consensus 387 d~~vi~t~~~~ 397 (450)
T 3gg2_A 387 EALFHVTEWKE 397 (450)
T ss_dssp SCEEECSCCGG
T ss_pred CEEEEccCCHH
Confidence 997765 5753
No 259
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=69.57 E-value=17 Score=31.97 Aligned_cols=70 Identities=14% Similarity=0.070 Sum_probs=47.3
Q ss_pred CCcEEEEEcCCCchHHH-HHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh-CCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHS-WLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S-~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
+.+||.++|= +.+..| ++..+...|.+|...--.... +..+.+++.|+ .+..-++.++.. .++|+|+..+
T Consensus 3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~---~~~~~L~~~gi-~v~~g~~~~~l~~~~~d~vV~Sp 74 (326)
T 3eag_A 3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYP---PMSTQLEALGI-DVYEGFDAAQLDEFKADVYVIGN 74 (326)
T ss_dssp CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCT---THHHHHHHTTC-EEEESCCGGGGGSCCCSEEEECT
T ss_pred CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCc---HHHHHHHhCCC-EEECCCCHHHcCCCCCCEEEECC
Confidence 3578999994 667776 788888899998876433221 23445667774 566556766655 5899888754
No 260
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=69.47 E-value=5.3 Score=36.02 Aligned_cols=72 Identities=13% Similarity=0.019 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH--h-CCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK--A-GISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~--~-g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
...||+++|- ++|..+++..++.-|. ++++.-...-......++.... . ...++..+.|.++ +++||+|+..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIit 96 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVIT 96 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEe
Confidence 4589999997 8888888877766665 7777643211111111111111 1 1246666778765 9999998875
No 261
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=69.37 E-value=12 Score=32.85 Aligned_cols=72 Identities=18% Similarity=0.114 Sum_probs=40.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCC--CCCCCCHHHHHHHHH--hCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACP--KGFEPDKETVEKARK--AGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P--~~~~~~~~~~~~~~~--~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||+++|-.+++..+++..+..-|. ++++.-. ..-.......+..+. .+ ..+.++.+..++++++|+|+...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~-~~~~v~~~~~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYD-SNTRVRQGGYEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTT-CCCEEEECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhC-CCcEEEeCCHHHhCCCCEEEEcC
Confidence 4899999778888888766654443 5666543 110000111121111 12 23344334488999999999875
No 262
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=69.34 E-value=3.3 Score=36.32 Aligned_cols=156 Identities=10% Similarity=0.016 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeC-Ccch------HHHHhhhCC-C-cEEe
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVF-GHQD------ILDLAKFAT-V-PVIN 80 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~-~~~~------~~~~a~~~~-v-PVIN 80 (261)
++-.=+..++.++|....|..-. + ..|.+.+..+.+... ...+-+=.+ +... +.+.|+..+ | -|++
T Consensus 14 ~SP~~hn~~f~~~gl~~~Y~~~~---v-~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAVNTv~~ 89 (277)
T 3don_A 14 LSPLMHHANFQSLNLENTYEAIN---V-PVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLV 89 (277)
T ss_dssp CHHHHHHHHHHHTTCCCEEEEEE---C-CGGGGGGHHHHHHHTTCSEEEECTTCTTTTGGGCSEECHHHHHHTCCCEEEE
T ss_pred ccHHHHHHHHHHcCcCcEEEEEE---c-CHHHHHHHHHHHhhCCCCEEEECcCCHHHHHHHhhhCCHHHHHhCceeEEEe
Confidence 44455778888999876664221 1 134567776666543 344444433 2222 123333221 1 1333
Q ss_pred -CCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHh--C
Q 024871 81 -GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKA--G 156 (261)
Q Consensus 81 -a~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~--g 156 (261)
.+.-..|=|-...=+..+++...+++|++++++|- +.+..+.+..+...|. +++++....- ++++. .
T Consensus 90 ~~g~l~G~NTD~~G~~~~L~~~~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~--------~a~~la~~ 160 (277)
T 3don_A 90 KDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMS--------RFNNWSLN 160 (277)
T ss_dssp ETTEEEEECCHHHHHHHHHHHHSTTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGG--------GGTTCCSC
T ss_pred cCCEEEEECChHHHHHHHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHH--------HHHHHHHh
Confidence 22122333333333334445444689999999996 6889999888888898 7877764321 11111 1
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
. .....++++++++++|+|+..+
T Consensus 161 ~-~~~~~~~~~~~~~~aDiVInaT 183 (277)
T 3don_A 161 I-NKINLSHAESHLDEFDIIINTT 183 (277)
T ss_dssp C-EEECHHHHHHTGGGCSEEEECC
T ss_pred c-ccccHhhHHHHhcCCCEEEECc
Confidence 1 1222356777899999999875
No 263
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=69.01 E-value=17 Score=34.21 Aligned_cols=66 Identities=20% Similarity=0.236 Sum_probs=46.8
Q ss_pred CCCCcEEEEEcC--------CCc-hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCC
Q 024871 104 RLEGTKVVYVGD--------GNN-IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 104 ~l~~~~i~~vGd--------~~~-v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aD 174 (261)
.++|+||++.|= ..+ -+..++..+...|.++.+.-|.--.. ..+.++.++++++++||
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~-------------~~~~~~~~~~~~~~~ad 416 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY-------------PGVEISDNLEEVVRNAD 416 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB-------------TTBCEESCHHHHHTTCS
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc-------------cCcceecCHHHHHhcCC
Confidence 589999999992 111 34556667777899999888854321 12345789999999999
Q ss_pred EEEEe-ccc
Q 024871 175 VVYSD-VWA 182 (261)
Q Consensus 175 viy~~-~w~ 182 (261)
+|... .|.
T Consensus 417 ~vvi~t~~~ 425 (478)
T 3g79_A 417 AIVVLAGHS 425 (478)
T ss_dssp EEEECSCCH
T ss_pred EEEEecCCH
Confidence 98765 464
No 264
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=68.99 E-value=17 Score=31.28 Aligned_cols=67 Identities=19% Similarity=0.295 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCCchHHH-HHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHS-WLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S-~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+.+||++||- +++... ++..+... +.+++.++- .+++..+ .+++.|... ++|.++.++++|+|+.-.
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d----~~~~~~~~~a~~~~~~~---~~~~~~ll~~~D~V~i~t 74 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFT----PNKVKREKICSDYRIMP---FDSIESLAKKCDCIFLHS 74 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEEC----SCHHHHHHHHHHHTCCB---CSCHHHHHTTCSEEEECC
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEC----CCHHHHHHHHHHcCCCC---cCCHHHHHhcCCEEEEeC
Confidence 4589999996 667775 66666554 678774432 2333333 345566432 789999999999999854
No 265
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.57 E-value=15 Score=34.19 Aligned_cols=72 Identities=21% Similarity=0.277 Sum_probs=49.1
Q ss_pred CCCCcEEEEEcCC-----Cc----hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCC
Q 024871 104 RLEGTKVVYVGDG-----NN----IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 104 ~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aD 174 (261)
.++|+||++.|=. .. -+..++..+...|.++.+.-|.-. +.+++.- ..+++.+++++++++||
T Consensus 319 ~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~-------~~~~~~~-~~~~~~~~~~~~~~~ad 390 (446)
T 4a7p_A 319 DVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV-------EQASKML-TDVEFVENPYAAADGAD 390 (446)
T ss_dssp CCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH-------HHHGGGC-SSCCBCSCHHHHHTTBS
T ss_pred cCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC-------HhHHHhc-CCceEecChhHHhcCCC
Confidence 5899999999931 11 345567777778999998888531 1222211 23566789999999999
Q ss_pred EEEEe-cccC
Q 024871 175 VVYSD-VWAS 183 (261)
Q Consensus 175 viy~~-~w~~ 183 (261)
+|... .|..
T Consensus 391 ~vvi~t~~~~ 400 (446)
T 4a7p_A 391 ALVIVTEWDA 400 (446)
T ss_dssp EEEECSCCTT
T ss_pred EEEEeeCCHH
Confidence 98774 5754
No 266
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=68.02 E-value=10 Score=34.59 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=48.6
Q ss_pred CCCCcEEEEEcCC-----Cc----hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCC
Q 024871 104 RLEGTKVVYVGDG-----NN----IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 104 ~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aD 174 (261)
.++|++|++.|=. .. -+..++..+...|.++.+.-|. ...... .++ +.+.+++++++++||
T Consensus 306 ~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~-~~~~~~------~~~---~~~~~~~~~~~~~~d 375 (402)
T 1dlj_A 306 ESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPM-LNKLES------EDQ---SVLVNDLENFKKQAN 375 (402)
T ss_dssp CCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTT-CSCCCT------TCC---SEECCCHHHHHHHCS
T ss_pred CCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCC-CChHHH------HcC---CeecCCHHHHHhCCc
Confidence 5899999999931 12 4555677777889999988884 221101 122 245678999999999
Q ss_pred EEEEecccC
Q 024871 175 VVYSDVWAS 183 (261)
Q Consensus 175 viy~~~w~~ 183 (261)
+|...+|.+
T Consensus 376 ~~v~~~~h~ 384 (402)
T 1dlj_A 376 IIVTNRYDN 384 (402)
T ss_dssp EEECSSCCG
T ss_pred EEEEecCCh
Confidence 999987654
No 267
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=67.93 E-value=42 Score=31.11 Aligned_cols=66 Identities=14% Similarity=0.202 Sum_probs=45.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-----------hC--------CCeEEEEcCHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-----------AG--------ISKIEITNDPKE 168 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-----------~g--------~~~i~~~~d~~~ 168 (261)
.||+++|- +.+..+++..++.-|.++++..+. ++.++.+++ .| .....++.|+ +
T Consensus 38 ~kV~VIGa-G~MG~~iA~~la~~G~~V~l~D~~-----~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~ 110 (463)
T 1zcj_A 38 SSVGVLGL-GTMGRGIAISFARVGISVVAVESD-----PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-K 110 (463)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-G
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-H
Confidence 58999995 788999988888889998877542 333332221 11 0124557887 6
Q ss_pred HhCCCCEEEEec
Q 024871 169 VVQGADVVYSDV 180 (261)
Q Consensus 169 a~~~aDviy~~~ 180 (261)
++++||+|+.-.
T Consensus 111 ~~~~aDlVIeaV 122 (463)
T 1zcj_A 111 ELSTVDLVVEAV 122 (463)
T ss_dssp GGTTCSEEEECC
T ss_pred HHCCCCEEEEcC
Confidence 799999999875
No 268
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=67.73 E-value=10 Score=35.50 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=44.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHHHHHH----------------hCCCeEEEEcCHHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVEKARK----------------AGISKIEITNDPKEV 169 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~~~~~----------------~g~~~i~~~~d~~~a 169 (261)
.||+++| .+++..+++..++.. |.+++++.. +++.++.+++ .....+..++|++++
T Consensus 10 mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~-----~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~ 83 (481)
T 2o3j_A 10 SKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDM-----NTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKA 83 (481)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECS-----CHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEEC-----CHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHH
Confidence 5899999 477888877666655 678776642 2222222221 001247889999999
Q ss_pred hCCCCEEEEec
Q 024871 170 VQGADVVYSDV 180 (261)
Q Consensus 170 ~~~aDviy~~~ 180 (261)
++++|+|+...
T Consensus 84 ~~~aDvvii~V 94 (481)
T 2o3j_A 84 IAEADLIFISV 94 (481)
T ss_dssp HHHCSEEEECC
T ss_pred hhcCCEEEEec
Confidence 99999998863
No 269
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=67.60 E-value=16 Score=32.07 Aligned_cols=69 Identities=10% Similarity=0.104 Sum_probs=45.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+.+||++||- +++...++..+... +++++.++-.. .+...+.+++.|.. ..+.|.++.++ ++|+|+.-.
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~---~~~~~~~~~~~~~~--~~~~~~~~ll~~~~~D~V~i~t 75 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRR---LENAQKMAKELAIP--VAYGSYEELCKDETIDIIYIPT 75 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSS---SHHHHHHHHHTTCC--CCBSSHHHHHHCTTCSEEEECC
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCC---HHHHHHHHHHcCCC--ceeCCHHHHhcCCCCCEEEEcC
Confidence 4579999996 66777777776665 67877444322 12222334556632 35789999987 789988754
No 270
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=67.34 E-value=21 Score=31.53 Aligned_cols=67 Identities=9% Similarity=0.056 Sum_probs=45.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHh--CCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVV--QGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~--~~aDviy~~~ 180 (261)
+.+||++||- +++.+..+..+... +++++.++- ++++..+ .+++.|.. .++|+++.+ .++|+|+.-.
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d----~~~~~~~~~~~~~g~~---~~~~~~~~l~~~~~D~V~i~t 74 (354)
T 3db2_A 4 NPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYS----RTEDKREKFGKRYNCA---GDATMEALLAREDVEMVIITV 74 (354)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEC----SSHHHHHHHHHHHTCC---CCSSHHHHHHCSSCCEEEECS
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEEC----CCHHHHHHHHHHcCCC---CcCCHHHHhcCCCCCEEEEeC
Confidence 3579999996 66888888887777 678774432 2333333 34556642 378999999 6789988754
No 271
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=67.26 E-value=24 Score=30.83 Aligned_cols=66 Identities=20% Similarity=0.223 Sum_probs=45.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
.+||++||- +++....+..+... +++++.++- .+++..+ .+++.| +..++|+++.++ ++|+|+.-.
T Consensus 4 ~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d----~~~~~~~~~a~~~g---~~~~~~~~~~l~~~~~D~V~i~t 73 (344)
T 3euw_A 4 TLRIALFGA-GRIGHVHAANIAANPDLELVVIAD----PFIEGAQRLAEANG---AEAVASPDEVFARDDIDGIVIGS 73 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEEC----SSHHHHHHHHHTTT---CEEESSHHHHTTCSCCCEEEECS
T ss_pred ceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEEC----CCHHHHHHHHHHcC---CceeCCHHHHhcCCCCCEEEEeC
Confidence 479999996 67777777776665 678774432 2333333 344455 356899999998 899998864
No 272
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=66.98 E-value=15 Score=32.43 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=45.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+.+||++||- +++....+..+... +++++.++- ++++..+ .+++.|. ..++|.++.++ ++|+|+.-.
T Consensus 12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d----~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~~D~V~i~t 83 (354)
T 3q2i_A 12 RKIRFALVGC-GRIANNHFGALEKHADRAELIDVCD----IDPAALKAAVERTGA---RGHASLTDMLAQTDADIVILTT 83 (354)
T ss_dssp SCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEEC----SSHHHHHHHHHHHCC---EEESCHHHHHHHCCCSEEEECS
T ss_pred CcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEc----CCHHHHHHHHHHcCC---ceeCCHHHHhcCCCCCEEEECC
Confidence 3579999996 56777777666665 678774432 2333333 3445663 66899999987 899998854
No 273
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=66.81 E-value=27 Score=30.14 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHH---H-HHHhh-hccEEEEeeCC--cchHHHHhhhCCCcEEeCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDA---A-RVLCR-YNDIIMARVFG--HQDILDLAKFATVPVINGLT 83 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt---~-~~ls~-~~D~iv~R~~~--~~~~~~~a~~~~vPVINa~~ 83 (261)
..+..++.|+...+|..+.+-..++ +.+.... + +.+++ -+|+|+.=..+ ...+..+++..++|+|...+
T Consensus 46 ~~~~g~~~a~~~i~G~~i~l~~~d~----~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~ 121 (386)
T 3sg0_A 46 PQSKTVAALPKEIGGEKVTYFALDD----ESDPTKAAQNARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAA 121 (386)
T ss_dssp HHHHHGGGSCSEETTEEEEEEEEEC----TTCHHHHHHHHHHHHHTSCCSEEECCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHHcCCEEEEEEEecC----CCCHHHHHHHHHHHHhhcCceEEECCCCchhHHHHHHHHHhcCCeEEEecC
Confidence 3455667777777776554422111 1122222 2 23444 36777642111 12345666778999998532
Q ss_pred --------CCCCh---------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHHHHHHHHhcCCcEEE
Q 024871 84 --------DYNHP---------CQIMADALTIIEHVGRLEGTKVVYVGDGNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 84 --------~~~HP---------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~S~~~~~~~~g~~~~ 135 (261)
...+| .+.-.-+......+ ..+||+++++... ....+...+...|.+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~ 191 (386)
T 3sg0_A 122 AAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKT---GAKKVGYIGFSDAYGEGYYKVLAAAAPKLGFELT 191 (386)
T ss_dssp CGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHHHT---TCCEEEEEEESSHHHHHHHHHHHHHHHHHTCEEC
T ss_pred CCccccccCCCCCcEEecCCCcHHHHHHHHHHHHhc---CCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEE
Confidence 11111 12222222222233 4689999985433 33444455556677653
No 274
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=66.48 E-value=14 Score=34.54 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=46.4
Q ss_pred CcEEEEEcCC---CchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEEE
Q 024871 107 GTKVVYVGDG---NNIVHSWLLMASVI--PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVYS 178 (261)
Q Consensus 107 ~~~i~~vGd~---~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy~ 178 (261)
.+||++||-+ +.+....+..+... +++++-++-. +++.. +.++++|...+..+.|.++.++ +.|+|+.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~----~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP----TLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS----CHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC----CHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEE
Confidence 4799999973 66776666666665 6787654432 23333 3345566443456889999985 6899998
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
-.
T Consensus 115 ~t 116 (479)
T 2nvw_A 115 SV 116 (479)
T ss_dssp CS
T ss_pred cC
Confidence 64
No 275
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=65.91 E-value=36 Score=31.07 Aligned_cols=74 Identities=18% Similarity=0.142 Sum_probs=43.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCc-----EEEEeCCCCCCCCHHHHH-HHH--HhCC----CeEEEEcCHHHHhCCC
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPF-----HFVCACPKGFEPDKETVE-KAR--KAGI----SKIEITNDPKEVVQGA 173 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~-----~~~~~~P~~~~~~~~~~~-~~~--~~g~----~~i~~~~d~~~a~~~a 173 (261)
+..||+++|-.++|..|++..+..-++ .+.+.-- .....++.++ .+- ..+. ..+.++.+..++++||
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~-d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~da 109 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLL-GSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV 109 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEec-CccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCC
Confidence 458999999778899998876654332 1332210 1111111111 111 1221 2567788889999999
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+|+...
T Consensus 110 DvVVita 116 (375)
T 7mdh_A 110 DWALLIG 116 (375)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9988864
No 276
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=65.84 E-value=51 Score=27.05 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCC-CCh-
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDY-NHP- 88 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~-~HP- 88 (261)
+-...++.++.++|.+++..+.. ...+..+.-+.+ +++-+|.|+ .+.......+.+ .++|||-.+... ..+
T Consensus 22 ~~~~gi~~~a~~~g~~~~~~~~~--~~~~~~~~~~~l--~~~~vdgiI--~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~ 94 (280)
T 3gyb_A 22 DLIQSLSDVLTPKGYRLSVIDSL--TSQAGTDPITSA--LSMRPDGII--IAQDIPDFTVPD-SLPPFVIAGTRITQAST 94 (280)
T ss_dssp HHHHHHHHHHGGGTCEEEEECSS--SSCSSSCHHHHH--HTTCCSEEE--EESCC---------CCCEEEESCCCSSSCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC--CchHHHHHHHHH--HhCCCCEEE--ecCCCChhhHhh-cCCCEEEECCCCCCCCC
Confidence 45667899999999999888765 333444444433 466789988 333322333334 899988754332 111
Q ss_pred --------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCchH----HHHHHHHhcCCcEEE
Q 024871 89 --------CQIMADALTIIEHVGRLEGTKVVYVGDGNNIV----HSWLLMASVIPFHFV 135 (261)
Q Consensus 89 --------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~----~S~~~~~~~~g~~~~ 135 (261)
.++--.+....-..| ..+|++++...... ..+...+...|..+.
T Consensus 95 ~~~V~~D~~~~g~~a~~~L~~~G---~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~ 150 (280)
T 3gyb_A 95 HDSVANDDFRGAEIATKHLIDLG---HTHIAHLRVGSGAGLRRFESFEATMRAHGLEPL 150 (280)
T ss_dssp TTEEEECHHHHHHHHHHHHHHTT---CCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCE
T ss_pred CCEEEechHHHHHHHHHHHHHCC---CCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCC
Confidence 222222222222223 47899999754322 223444555665443
No 277
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=65.77 E-value=15 Score=29.95 Aligned_cols=75 Identities=19% Similarity=0.149 Sum_probs=47.3
Q ss_pred hCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE---EcCHHHHhCCCCEEEE
Q 024871 102 VGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI---TNDPKEVVQGADVVYS 178 (261)
Q Consensus 102 ~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~---~~d~~~a~~~aDviy~ 178 (261)
...++|++|.+.|..+.+...++..+..-|.+++.+.-.. +-.+.....+...+.. ++++.++++++|+|+.
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE-----EQGPELRERGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh-----HHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 3458899999999988899999888877898888775321 1122233333202211 1456788999999998
Q ss_pred ecc
Q 024871 179 DVW 181 (261)
Q Consensus 179 ~~w 181 (261)
...
T Consensus 91 ~ag 93 (236)
T 3e8x_A 91 AAG 93 (236)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 278
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=65.57 E-value=4.9 Score=29.88 Aligned_cols=69 Identities=9% Similarity=0.094 Sum_probs=42.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCH---HHH-hCCCCEEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDP---KEV-VQGADVVYS 178 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~---~~a-~~~aDviy~ 178 (261)
+++++|+++|- +++...++..+...|.+++++... ++..+.+++.|. .+... .+. +++ ++++|+|+.
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~-----~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKVNAYASYAT-HAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHHHTTTTTCS-EEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhCC-EEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 56788999996 889999998888888887776542 233333333342 22211 122 233 678999988
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 77 ~~ 78 (144)
T 2hmt_A 77 AI 78 (144)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 279
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=65.18 E-value=11 Score=34.73 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=45.0
Q ss_pred CCcEEEEEcC---CCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEE
Q 024871 106 EGTKVVYVGD---GNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVY 177 (261)
Q Consensus 106 ~~~~i~~vGd---~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy 177 (261)
+.+||++||- ++++.+..+..+... +++++-++- ++++.. +.++++|...+..+.|.++.++ +.|+|+
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d----~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~ 94 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS----PKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIV 94 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC----SSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEe----CCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEE
Confidence 3589999997 355555555555555 677765543 223333 3345566443456889999986 689999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
.-.
T Consensus 95 i~t 97 (438)
T 3btv_A 95 IAI 97 (438)
T ss_dssp ECS
T ss_pred EeC
Confidence 864
No 280
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=65.15 E-value=33 Score=31.96 Aligned_cols=121 Identities=10% Similarity=-0.008 Sum_probs=70.3
Q ss_pred HHHHHHhcCCeEEEeCC-----------CC--cCCCCCCCHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCC
Q 024871 16 FETGFSLLGGHAIYLGP-----------DD--IQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGL 82 (261)
Q Consensus 16 Fe~A~~~LGg~~~~l~~-----------~~--s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~ 82 (261)
...=...+|..++.+.+ .. .-...|-|++|..+.=++-+.++ +........+.+.+.-++|.+...
T Consensus 188 ik~lL~~~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~-~~~~~~~~A~~Le~~~GiP~~~~~ 266 (458)
T 3pdi_B 188 IAESIESFGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLV-VGQSLAGAADALAERTGVPDRRFG 266 (458)
T ss_dssp HHHHHHTTTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEE-ESGGGHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHcCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEE-ecHHHHHHHHHHHHHHCCCEEecC
Confidence 34446689999887631 11 11245778898888766666653 433334456677777899988732
Q ss_pred CC-CCCh----hHHHHHHH------HH-----------HHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 83 TD-YNHP----CQIMADAL------TI-----------IEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 83 ~~-~~HP----tQ~L~Dl~------Ti-----------~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.. +-.- -+.|+.++ .| .+....+.|+|+++.||. --+.+++..+.-+|++++.++
T Consensus 267 ~p~G~~~T~~~l~~la~~~g~~~~~~i~~er~r~~~~~~d~~~~l~Gkrv~i~~~~-~~~~~l~~~L~elGm~vv~~~ 343 (458)
T 3pdi_B 267 MLYGLDAVDAWLMALAEISGNPVPDRYKRQRAQLQDAMLDTHFMLSSARTAIAADP-DLLLGFDALLRSMGAHTVAAV 343 (458)
T ss_dssp CSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCH-HHHHHHHHHHHTTTCEEEEEE
T ss_pred CCcCHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEE
Confidence 10 0000 01111111 01 111123789999999994 355677777788999877654
No 281
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=65.06 E-value=16 Score=32.72 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=43.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE---EcC---HHHHhCCCCEEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI---TND---PKEVVQGADVVYS 178 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~---~~d---~~~a~~~aDviy~ 178 (261)
+.|+||+++|. +...+.++.++..+|++++++.|....+...+ ....+ ..| +.+.++++|+|..
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~---------ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV---------ADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT---------CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh---------CCceEecCcCCHHHHHHHHHhCCEeee
Confidence 68899999996 55788899999999999998887543332111 11111 122 4567788998844
No 282
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=64.90 E-value=14 Score=34.62 Aligned_cols=67 Identities=13% Similarity=0.038 Sum_probs=47.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh-CCCeEEEEcCHHHHhCC---CCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA-GISKIEITNDPKEVVQG---ADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~-g~~~i~~~~d~~~a~~~---aDviy~~~ 180 (261)
.+|++|| .+++..+++..+...|.++.+..+ .++..+.+.+. +...+..++|+++++++ +|+|+.-.
T Consensus 6 ~~IgvIG-~G~mG~~lA~~L~~~G~~V~v~dr-----~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilav 76 (474)
T 2iz1_A 6 ANFGVVG-MAVMGKNLALNVESRGYTVAIYNR-----TTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMV 76 (474)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-----SHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECC
T ss_pred CcEEEEe-eHHHHHHHHHHHHhCCCEEEEEcC-----CHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEc
Confidence 6899999 588888888887777888776643 34444444433 11236778899998876 99998864
No 283
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=64.68 E-value=4.7 Score=35.34 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=33.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG 141 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~ 141 (261)
+++|++|++||. ++|+.+.+..+...|.++++++|..
T Consensus 10 ~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 589999999996 7899999999999999999999854
No 284
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=64.56 E-value=23 Score=30.70 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=43.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHh-CCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
+||++||- +++...++..+... +.+++.++- .+++..+ .+++.|. ...+.|.++.+ +++|+|+.-.
T Consensus 2 ~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d----~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 2 LKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYS----RKLETAATFASRYQN--IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSEEEEEEEC----SSHHHHHHHGGGSSS--CEEESCHHHHHTSSCSEEEECS
T ss_pred eEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEe----CCHHHHHHHHHHcCC--CeEeCCHHHHhCCCCCEEEEeC
Confidence 58999996 66777777666655 577764432 2233222 2334452 35678999999 7899999864
No 285
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=64.38 E-value=21 Score=31.42 Aligned_cols=61 Identities=20% Similarity=0.300 Sum_probs=43.6
Q ss_pred HHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 100 EHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 100 e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..|.++ +.+|+-.+ .+|...+++.+++.+|++.+++-|++ .++.-++.++..| +.+..+.
T Consensus 65 ~~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~~~ 126 (325)
T 3dwg_A 65 EADGLLRPGATILEPT-SGNTGISLAMAARLKGYRLICVMPEN--TSVERRQLLELYG-AQIIFSA 126 (325)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEESS--SCHHHHHHHHHHT-CEEEEEC
T ss_pred HHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHCC-CEEEEEC
Confidence 3445544 34554443 48999999999999999999888987 3445566777888 5777665
No 286
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=64.10 E-value=6.2 Score=33.12 Aligned_cols=59 Identities=10% Similarity=0.130 Sum_probs=41.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCC----cEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIP----FHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g----~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..||+++|- +++..+++..+..-| .++++..+..-. .| +..+.+++++++++|+|+.-.
T Consensus 4 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------~g---~~~~~~~~~~~~~~D~vi~~v 66 (262)
T 2rcy_A 4 NIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN-----------TT---LNYMSSNEELARHCDIIVCAV 66 (262)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------SS---SEECSCHHHHHHHCSEEEECS
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------Cc---eEEeCCHHHHHhcCCEEEEEe
Confidence 468999995 888888877766656 466666543211 23 345778889999999988864
No 287
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=63.39 E-value=15 Score=28.48 Aligned_cols=61 Identities=16% Similarity=0.036 Sum_probs=45.2
Q ss_pred CcEEEEEcCC---CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDG---NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
-.+|++||-. ++..+.++..+...|++++.+.|+.-.+ .| +..+.++++..+..|+++.-.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i----------~G---~~~y~sl~~l~~~vDlvvi~v 85 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------LG---RKCYPSVLDIPDKIEVVDLFV 85 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------TT---EECBSSGGGCSSCCSEEEECS
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeE----------CC---eeccCCHHHcCCCCCEEEEEe
Confidence 5799999974 4677777776777788998888874111 12 566788999888999988764
No 288
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=63.35 E-value=9.6 Score=33.26 Aligned_cols=66 Identities=20% Similarity=0.094 Sum_probs=41.9
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC--cEEEEeCCCCCCCCHHHHHH-HHHhC------CCeEEE-EcCHHHHhCCCCEEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP--FHFVCACPKGFEPDKETVEK-ARKAG------ISKIEI-TNDPKEVVQGADVVY 177 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g--~~~~~~~P~~~~~~~~~~~~-~~~~g------~~~i~~-~~d~~~a~~~aDviy 177 (261)
.||+++| .+++..+++..+..-| .++++.... ++..+. +.+.+ ...+.+ +.|+ ++++++|+|+
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvVi 74 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDAN-----EAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVI 74 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCC-----HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEE
Confidence 4899999 6888888877766656 577777543 222221 11110 012333 5677 7899999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 75 iav 77 (309)
T 1hyh_A 75 STL 77 (309)
T ss_dssp ECC
T ss_pred Eec
Confidence 865
No 289
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=63.20 E-value=39 Score=28.25 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=46.2
Q ss_pred CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCC------chHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhC
Q 024871 83 TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGN------NIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAG 156 (261)
Q Consensus 83 ~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~------~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g 156 (261)
+...|-...|-+++. ++.||++|.-.. .-.+|...+...+|+++..+.-
T Consensus 15 ~~l~~~~~~l~~~~~--------~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~----------------- 69 (229)
T 1fy2_A 15 AWLEHALPLIANQLN--------GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHR----------------- 69 (229)
T ss_dssp CTTTTTHHHHHHHHT--------TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTS-----------------
T ss_pred cHHHHHHHHHHHHhc--------CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEec-----------------
Confidence 345677777766652 468999996432 3577888888888887665421
Q ss_pred CCeEEEEcCHHHHhCCCCEEEEec
Q 024871 157 ISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 157 ~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+|..+.+++||.|+...
T Consensus 70 ------~~d~~~~l~~ad~I~lpG 87 (229)
T 1fy2_A 70 ------VADPLAAIEKAEIIIVGG 87 (229)
T ss_dssp ------SSCHHHHHHHCSEEEECC
T ss_pred ------cccHHHHHhcCCEEEECC
Confidence 135557788999999974
No 290
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=63.13 E-value=25 Score=30.54 Aligned_cols=64 Identities=16% Similarity=0.051 Sum_probs=43.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+||++||- +++.+..+..+... +++++.++- ++++..+ .+++.|. . ++|.++.++ ++|+|+.-.
T Consensus 4 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d----~~~~~~~~~~~~~~~---~-~~~~~~~l~~~~~D~V~i~t 71 (331)
T 4hkt_A 4 VRFGLLGA-GRIGKVHAKAVSGNADARLVAVAD----AFPAAAEAIAGAYGC---E-VRTIDAIEAAADIDAVVICT 71 (331)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCTTEEEEEEEC----SSHHHHHHHHHHTTC---E-ECCHHHHHHCTTCCEEEECS
T ss_pred eEEEEECC-CHHHHHHHHHHhhCCCcEEEEEEC----CCHHHHHHHHHHhCC---C-cCCHHHHhcCCCCCEEEEeC
Confidence 68999996 67777877776665 678774432 2333333 3445553 3 789999998 899998854
No 291
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=62.89 E-value=34 Score=29.93 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=50.3
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+.+--.|.+|++.|. +.+.+..+.++..+|.+++.+....- -++.+++.|...+ + .+.++..+++|+++-..
T Consensus 171 ~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~v-~-~~~~~~~~~~D~vid~~ 242 (348)
T 3two_A 171 FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEH-----KKQDALSMGVKHF-Y-TDPKQCKEELDFIISTI 242 (348)
T ss_dssp HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSST-----THHHHHHTTCSEE-E-SSGGGCCSCEEEEEECC
T ss_pred hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHhcCCCee-c-CCHHHHhcCCCEEEECC
Confidence 334356899999995 78999999999999999887654332 2456778885433 3 56555455789888643
No 292
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=62.72 E-value=26 Score=30.76 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=45.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+||++||- +++..+.+..+... +.+++.++- ++++..+ .+++.|.. ..++|.++.++ ++|+|+.-.
T Consensus 3 ~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d----~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~~D~V~i~t 72 (344)
T 3ezy_A 3 LRIGVIGL-GRIGTIHAENLKMIDDAILYAISD----VREDRLREMKEKLGVE--KAYKDPHELIEDPNVDAVLVCS 72 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHGGGSTTEEEEEEEC----SCHHHHHHHHHHHTCS--EEESSHHHHHHCTTCCEEEECS
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEEC----CCHHHHHHHHHHhCCC--ceeCCHHHHhcCCCCCEEEEcC
Confidence 68999996 77888887777665 577774432 2333333 34556642 45789999988 799999854
No 293
>3ic6_A Putative methylase family protein; putative methylase family Pro structural genomics, PSI-2, protein structure initiative; 2.59A {Neisseria gonorrhoeae fa 1090}
Probab=62.60 E-value=6.8 Score=33.36 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=49.8
Q ss_pred CCCcEEEEEcC--CCchHHHHHHHHhcCCc-EEEEeCCCCCCCC-------------------HHHHHHHHHhCC----C
Q 024871 105 LEGTKVVYVGD--GNNIVHSWLLMASVIPF-HFVCACPKGFEPD-------------------KETVEKARKAGI----S 158 (261)
Q Consensus 105 l~~~~i~~vGd--~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~-------------------~~~~~~~~~~g~----~ 158 (261)
+.++.|+.++- +.|+. +.++.+..||+ .++++.|..+..+ ++.... ..|. .
T Consensus 15 l~~l~vVLd~~~dP~NiG-aI~Rta~afG~~~l~Lv~p~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~~--aaGA~~~l~ 91 (223)
T 3ic6_A 15 LGNIRIILTRTSHPANIG-SAARAMKTMGLHRLTIVTPNLMATPMTENPPVFNPDDVQSFALPEESFIL--ASGAADVLH 91 (223)
T ss_dssp GGGEEEEEESCCCHHHHH-HHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHH--HGGGHHHHH
T ss_pred hCCEEEEEeCCCCCChHH-HHHHHHHHcCCCEEEEeCCCccccccccccccccccccccccCCHHHHHH--hCCccccCc
Confidence 56788999884 45654 67778888998 7888888775321 344332 2231 2
Q ss_pred eEEEEcCHHHHhCCCCEEEEec
Q 024871 159 KIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 159 ~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+++.++++++++++..||.+.
T Consensus 92 ~~~v~~~l~eal~~~~~vvatt 113 (223)
T 3ic6_A 92 NAEIVATLDEALADTTIACALT 113 (223)
T ss_dssp TCEEESCHHHHHTTEEEEEEEC
T ss_pred eEEEeCCHHHHHHhCCeEEEEe
Confidence 3466889999999998777754
No 294
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=62.40 E-value=25 Score=30.58 Aligned_cols=136 Identities=10% Similarity=0.042 Sum_probs=73.3
Q ss_pred CCHHHHHHHHhhh-ccEEEEeeCCcch--HHHHhhhCCCcEEeCC-CCCCChhHHHHH--------HHH-----------
Q 024871 41 EETRDAARVLCRY-NDIIMARVFGHQD--ILDLAKFATVPVINGL-TDYNHPCQIMAD--------ALT----------- 97 (261)
Q Consensus 41 Es~~Dt~~~ls~~-~D~iv~R~~~~~~--~~~~a~~~~vPVINa~-~~~~HPtQ~L~D--------l~T----------- 97 (261)
+..+|+...+..+ .|++|+=|+.-+. ...+.+..+++++.-+ ....|++-.|+| .|.
T Consensus 56 ~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~~~~~~Dllin~~~~~~~~~Y~~~~p~~~~~l~ 135 (282)
T 3hbm_A 56 ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIKPHHCDILLNVNAYAKASDYEGLVPFKCEVRC 135 (282)
T ss_dssp SCHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSCCCCCCSEEEECSTTCCGGGGTTTCC-CCEEEE
T ss_pred cCHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCCCcccCCEEEeCCcccchhhccccCCCCCeEee
Confidence 5678899988887 7999999886433 3444444455554432 123455544444 110
Q ss_pred ------HHHHh----CC--CCCcEEEEE-cC--CCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE-
Q 024871 98 ------IIEHV----GR--LEGTKVVYV-GD--GNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIE- 161 (261)
Q Consensus 98 ------i~e~~----g~--l~~~~i~~v-Gd--~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~- 161 (261)
+++.| .. -+..+|.++ |. ..+.....+..+...+ .+.+++-++....+++.+.+++.+ +++
T Consensus 136 G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~--~v~v 212 (282)
T 3hbm_A 136 GFSYALIREEFYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHN--NIRL 212 (282)
T ss_dssp SGGGCCCCHHHHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCS--SEEE
T ss_pred CCcccccCHHHHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCC--CEEE
Confidence 11111 11 123456544 43 3565555666655543 344444334333344433343332 333
Q ss_pred --EEcCHHHHhCCCCEEEEe
Q 024871 162 --ITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 162 --~~~d~~~a~~~aDviy~~ 179 (261)
..+++.+.++.||++++-
T Consensus 213 ~~~~~~m~~~m~~aDlvI~~ 232 (282)
T 3hbm_A 213 FIDHENIAKLMNESNKLIIS 232 (282)
T ss_dssp EESCSCHHHHHHTEEEEEEE
T ss_pred EeCHHHHHHHHHHCCEEEEC
Confidence 357889999999999994
No 295
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=62.30 E-value=21 Score=31.76 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=42.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhCC--CCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQG--ADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~~--aDviy~~~ 180 (261)
+.+||++||-+..-...++..+..-+++++-++- ++++.. +.+++.|. ...+.|.++.+++ .|+||.-.
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d----~~~~~a~~~a~~~~~--~~~~~~~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHE----KDDALAAEFSAVYAD--ARRIATAEEILEDENIGLIVSAA 96 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEEC----SCHHHHHHHHHHSSS--CCEESCHHHHHTCTTCCEEEECC
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEc----CCHHHHHHHHHHcCC--CcccCCHHHHhcCCCCCEEEEeC
Confidence 4589999997543223344444456788775553 233333 33455653 3568899999976 89988754
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=62.27 E-value=42 Score=24.37 Aligned_cols=66 Identities=20% Similarity=0.160 Sum_probs=42.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hCCCeEEEEcC---HH----HHhCCCCEEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AGISKIEITND---PK----EVVQGADVVYS 178 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~~~~d---~~----~a~~~aDviy~ 178 (261)
+.+|+++|- +++...++..+...|.+++++.+ +++..+.+++ .|. .+ +..| .+ ..++++|+|+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~-----~~~~~~~~~~~~~~-~~-~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-----DKDICKKASAEIDA-LV-INGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-----CHHHHHHHHHHCSS-EE-EESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-----CHHHHHHHHHhcCc-EE-EEcCCCCHHHHHHcCcccCCEEEE
Confidence 578999995 88888888888888988887754 2333444443 342 22 2222 22 22789999888
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 76 ~~ 77 (140)
T 1lss_A 76 VT 77 (140)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 297
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=61.56 E-value=26 Score=29.66 Aligned_cols=62 Identities=18% Similarity=0.079 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEcCC--CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH
Q 024871 90 QIMADALTIIEHVGRLEGTKVVYVGDG--NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK 154 (261)
Q Consensus 90 Q~L~Dl~Ti~e~~g~l~~~~i~~vGd~--~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~ 154 (261)
+--.+...-.++.+.++|+++.+.|.. ..+...++..+..-|.++++++-.. .++.++.+.+
T Consensus 9 ~~~~~~~~~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~l~~ 72 (280)
T 3nrc_A 9 HHSSGLVPRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ---FKDRVEKLCA 72 (280)
T ss_dssp -------------CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT---CHHHHHHHHG
T ss_pred cccCCCCCCCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch---HHHHHHHHHH
Confidence 333333344455577999999999976 4599999998888899988876543 3344444443
No 298
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=61.27 E-value=5.7 Score=34.90 Aligned_cols=65 Identities=14% Similarity=0.077 Sum_probs=42.6
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-HHHHh--C-----CCeEEEEcCHHHHhCCCCEEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-KARKA--G-----ISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~~~~~--g-----~~~i~~~~d~~~a~~~aDviy 177 (261)
.||+++|- +++..+++..++.-|. ++++...+ ++.++ .+.+. + ..++.. .+ .+++++||+|+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~-----~~~~~~~~~~l~~~~~~~~~~~i~~-~~-~~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRD-----EDRAQAEAEDIAHAAPVSHGTRVWH-GG-HSELADAQVVI 72 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHTTSCCTTSCCEEEE-EC-GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----HHHHHHHHHhhhhhhhhcCCeEEEE-CC-HHHhCCCCEEE
Confidence 48999996 8899999888877787 88877543 22221 12221 1 123433 45 57899999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 73 i~~ 75 (304)
T 2v6b_A 73 LTA 75 (304)
T ss_dssp ECC
T ss_pred EcC
Confidence 874
No 299
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=61.24 E-value=78 Score=27.09 Aligned_cols=118 Identities=16% Similarity=0.101 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHhcC---CeEEEeCCCCcCCCCCCCHHHHH----HHHhhh-ccEEEEeeCC--cchHHHHhhhCCCcEEe
Q 024871 11 RTRVSFETGFSLLG---GHAIYLGPDDIQMGKREETRDAA----RVLCRY-NDIIMARVFG--HQDILDLAKFATVPVIN 80 (261)
Q Consensus 11 RTR~SFe~A~~~LG---g~~~~l~~~~s~~~kgEs~~Dt~----~~ls~~-~D~iv~R~~~--~~~~~~~a~~~~vPVIN 80 (261)
..+-.++.|+..++ |..+.+-..++ +.+..... +.+++- +|+|+-=..+ ...+..+++..++|+|.
T Consensus 35 ~~~~g~~~a~~~in~i~G~~i~l~~~D~----~~~~~~~~~~~~~l~~~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~ 110 (366)
T 3td9_A 35 MVWEGIQIAHEEKPTVLGEEVELVLLDT----RSEKTEAANAAARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVT 110 (366)
T ss_dssp HHHHHHHHHHHHCCEETTEEEEEEEEEC----TTCHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhhhcCCeEEEEEEecC----CCCHHHHHHHHHHHhccCCeEEEEccCCchhHHHHHHHHHhCCCeEEe
Confidence 34668899999988 44433321111 11222222 233443 6777642211 12345666778999998
Q ss_pred CCC-C----C-------CChh--HHHHHHHHHH-HHhCCCCCcEEEEEcC-CC----chHHHHHHHHhcCCcEEE
Q 024871 81 GLT-D----Y-------NHPC--QIMADALTII-EHVGRLEGTKVVYVGD-GN----NIVHSWLLMASVIPFHFV 135 (261)
Q Consensus 81 a~~-~----~-------~HPt--Q~L~Dl~Ti~-e~~g~l~~~~i~~vGd-~~----~v~~S~~~~~~~~g~~~~ 135 (261)
... . . ..|+ +.-.-+.... ++ +..++|+++.+ .+ .....+...+...|.+++
T Consensus 111 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~---~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~ 182 (366)
T 3td9_A 111 PASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKN---LGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVK 182 (366)
T ss_dssp SSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHT---SCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHh---cCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEE
Confidence 532 1 1 1122 1111122222 33 34689999943 22 134445566677787654
No 300
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=61.17 E-value=22 Score=31.13 Aligned_cols=88 Identities=8% Similarity=0.128 Sum_probs=47.3
Q ss_pred CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcC-Cc-EEEEeCCCCCCCCHHHHHH-HHHhCCCeE
Q 024871 84 DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVI-PF-HFVCACPKGFEPDKETVEK-ARKAGISKI 160 (261)
Q Consensus 84 ~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~-g~-~~~~~~P~~~~~~~~~~~~-~~~~g~~~i 160 (261)
.+.||-|. ++-...+.++|++|.+.|..+.+...++..+... |. +++..+-. +.-.+. .++.....+
T Consensus 3 ~~~~~~~~-----~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~-----~~~~~~~~~~~~~~~v 72 (344)
T 2gn4_A 3 HHHHHGSM-----SMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD-----ELKQSEMAMEFNDPRM 72 (344)
T ss_dssp ------------------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC-----HHHHHHHHHHHCCTTE
T ss_pred CccCCCCC-----CCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC-----hhhHHHHHHHhcCCCE
Confidence 34566653 4444556689999999999888888888776666 86 87766532 111111 112111123
Q ss_pred EE-E------cCHHHHhCCCCEEEEecc
Q 024871 161 EI-T------NDPKEVVQGADVVYSDVW 181 (261)
Q Consensus 161 ~~-~------~d~~~a~~~aDviy~~~w 181 (261)
+. . ++++++++++|+|+-...
T Consensus 73 ~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 73 RFFIGDVRDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp EEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred EEEECCCCCHHHHHHHHhcCCEEEECCC
Confidence 22 1 224568899999998764
No 301
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=61.10 E-value=15 Score=34.48 Aligned_cols=67 Identities=13% Similarity=0.000 Sum_probs=47.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh-C----CCeEEEEcCHHHHhC---CCCEEEEe
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA-G----ISKIEITNDPKEVVQ---GADVVYSD 179 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~-g----~~~i~~~~d~~~a~~---~aDviy~~ 179 (261)
.||+++| .+++..+++..+...|.++.+... .++..+.+.+. | ...+..+.|++++++ ++|+|+.-
T Consensus 2 MkIgVIG-~G~mG~~lA~~La~~G~~V~v~dr-----~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVila 75 (478)
T 1pgj_A 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR-----TYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALIL 75 (478)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-----SHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEEC
T ss_pred CEEEEEC-hHHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEe
Confidence 4799999 588888888888788888776643 33444444433 3 123677889998887 59999886
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 76 V 76 (478)
T 1pgj_A 76 V 76 (478)
T ss_dssp C
T ss_pred c
Confidence 4
No 302
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=61.08 E-value=13 Score=32.68 Aligned_cols=70 Identities=14% Similarity=0.046 Sum_probs=44.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCC-CCCHHHHHHHHHhCCCeEEEEcCHHHHhCC--CCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGF-EPDKETVEKARKAGISKIEITNDPKEVVQG--ADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~-~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~--aDviy~~~ 180 (261)
+||++||-++ .....+..+ .-+++++-++-..- .-.+...+.++++|. ....++|.++.+++ .|+||.-.
T Consensus 3 ~rvgiiG~G~-~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 3 LKICVIGSSG-HFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNI-KPKKYNNWWEMLEKEKPDILVINT 75 (337)
T ss_dssp EEEEEECSSS-CHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTC-CCEECSSHHHHHHHHCCSEEEECS
T ss_pred eEEEEEccch-hHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCC-CCcccCCHHHHhcCCCCCEEEEeC
Confidence 6899999643 344444444 45678876554332 233444445555663 23578999999874 89988754
No 303
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=61.03 E-value=64 Score=27.89 Aligned_cols=160 Identities=9% Similarity=-0.013 Sum_probs=89.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHHH-------hhh---CCCcEE
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILDL-------AKF---ATVPVI 79 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~~-------a~~---~~vPVI 79 (261)
++-.=+..++.++|....|..-. +. .|.+.+.++.+... ...+-+=.+-...+..+ |+. .+.-++
T Consensus 22 ~SP~~hn~~f~~~gl~~~Y~~~~---v~-~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~ 97 (281)
T 3o8q_A 22 KSPFIHTLFARQTQQSMIYTAQC---VP-VDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKK 97 (281)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEEC---CC-TTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred CcHHHHHHHHHHcCCCcEEEEee---cC-HHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEE
Confidence 44455678889999987775322 11 46788888866543 45555544433333222 222 233344
Q ss_pred eCCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 80 NGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 80 Na~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
|-++ -..|=|-...=+..+.+...+++|++++++|- +.+..+.+..+...|. +++++.-.. +...+.+++.+.
T Consensus 98 ~~~g~l~G~NTD~~G~~~~L~~~~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~----~~a~~la~~~~~ 172 (281)
T 3o8q_A 98 LDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTF----AKAEQLAELVAA 172 (281)
T ss_dssp CTTSCEEEECCHHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSH----HHHHHHHHHHGG
T ss_pred cCCCcEEEEecHHHHHHHHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCH----HHHHHHHHHhhc
Confidence 4322 22333333222233333323689999999996 5788888888888896 888775321 111122222220
Q ss_pred -CeEEEEcCHHHHhCCCCEEEEec
Q 024871 158 -SKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 158 -~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..+... +.++..+++|+|+..+
T Consensus 173 ~~~~~~~-~~~~l~~~aDiIInaT 195 (281)
T 3o8q_A 173 YGEVKAQ-AFEQLKQSYDVIINST 195 (281)
T ss_dssp GSCEEEE-EGGGCCSCEEEEEECS
T ss_pred cCCeeEe-eHHHhcCCCCEEEEcC
Confidence 123333 4455558999999875
No 304
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=60.97 E-value=11 Score=34.86 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHH-hcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMA-SVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~-~~~g~~~~~~~P 139 (261)
.+.|+|+++.||. -.+.|++..+ .-+|++++.++.
T Consensus 304 ~l~Gkrv~i~g~~-~~~~~l~~~L~~elG~~vv~~~~ 339 (437)
T 3aek_A 304 TLTGKSLFMFPDS-QLEIPLARFLARECGMKTTEIAT 339 (437)
T ss_dssp HHTTCEEEECSSS-SCHHHHHHHHHHTTCCEEEEEEE
T ss_pred HhCCCEEEEEcCc-hHHHHHHHHHHHHcCCEEEEEEe
Confidence 3789999999995 4667888887 789999887754
No 305
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=60.80 E-value=4.3 Score=38.07 Aligned_cols=157 Identities=14% Similarity=0.096 Sum_probs=83.4
Q ss_pred HHHHHH--HHhc-CCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeCC----cchHHHHhhhCCCcEEeCCCCCC
Q 024871 14 VSFETG--FSLL-GGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFG----HQDILDLAKFATVPVINGLTDYN 86 (261)
Q Consensus 14 ~SFe~A--~~~L-Gg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~~----~~~~~~~a~~~~vPVINa~~~~~ 86 (261)
..+..+ ++.+ |-+..++.-.. ..-|.+.++++-+..-+..+-+-.+. ...+..+.+..++||+|-++
T Consensus 89 vmh~ka~lf~~~gGid~~yi~ldv---~d~de~~~~v~~l~~~f~GinvED~T~P~k~~il~~l~~avNt~vf~dD~--- 162 (439)
T 2dvm_A 89 VMEGKALLFKRFGGVDAFPIMIKE---QEPNKFIDIVKAIAPTFGGINLEDIASPKCFYILERLREELDIPVFHDDQ--- 162 (439)
T ss_dssp HHHHHHHHHHHHHCCEEEEEECSC---CSHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHH---
T ss_pred HHHHHHHHHHHhCCCCCeeeeeec---CCHHHHHHHHHHhCccCcEEEEEeCCCchHHHHHHHHHHhcCEEEEeCCC---
Confidence 344545 7888 56655542221 11233444444433112455553222 23455555667899997332
Q ss_pred ChhHHHHHHHHHH---HHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCc---EEEEeC----CCCCC-CCHH---HH--
Q 024871 87 HPCQIMADALTII---EHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPF---HFVCAC----PKGFE-PDKE---TV-- 149 (261)
Q Consensus 87 HPtQ~L~Dl~Ti~---e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~---~~~~~~----P~~~~-~~~~---~~-- 149 (261)
|=|- -.|+..+. +..| +++++|++++|- +....+.+..+...|. +++++- -.|+. ..++ +.
T Consensus 163 ~gtg-ntd~aG~~~AL~~~g~~l~~~rvlvlGA-GgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~ 240 (439)
T 2dvm_A 163 QGTA-AVVLAGLLNALKVVGKKISEITLALFGA-GAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPY 240 (439)
T ss_dssp HHHH-HHHHHHHHHHHHHHTCCTTTCCEEEECC-SHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTT
T ss_pred cEEe-ehHHHHHHHHHHHhCCCccCCEEEEECc-cHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHH
Confidence 3333 55555543 3344 699999999996 5556666666666676 677665 22211 1111 10
Q ss_pred --HHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 150 --EKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 150 --~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..++..+. .. ...++.++++++|+|+..+
T Consensus 241 ~~~~a~~~~~-~~-~~~~L~e~l~~aDVlInaT 271 (439)
T 2dvm_A 241 RGWLLKKTNG-EN-IEGGPQEALKDADVLISFT 271 (439)
T ss_dssp CHHHHTTSCT-TC-CCSSHHHHHTTCSEEEECS
T ss_pred HHHHhhcccc-cc-ccccHHHHhccCCEEEEcC
Confidence 11111110 00 1357889999999999876
No 306
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=60.70 E-value=18 Score=31.78 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=46.4
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEE
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVY 177 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy 177 (261)
+.-+.+||++||-+..+....+..+... +++++-++- ++++.. +.++++|. ...++|.++.++ +.|+||
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d----~~~~~~~~~a~~~~~--~~~~~~~~~ll~~~~vD~V~ 87 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS----RTRSHAEEFAKMVGN--PAVFDSYEELLESGLVDAVD 87 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC----SSHHHHHHHHHHHSS--CEEESCHHHHHHSSCCSEEE
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc----CCHHHHHHHHHHhCC--CcccCCHHHHhcCCCCCEEE
Confidence 3456689999997546666666666665 477765543 233333 33455663 356889999986 589998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
.-.
T Consensus 88 i~t 90 (340)
T 1zh8_A 88 LTL 90 (340)
T ss_dssp ECC
T ss_pred EeC
Confidence 864
No 307
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=60.51 E-value=39 Score=30.25 Aligned_cols=70 Identities=29% Similarity=0.303 Sum_probs=46.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhc-CCcEEEEeCCCCCCCCHHHHHHH-HHhCC--------C-------eE-EEEcCHHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASV-IPFHFVCACPKGFEPDKETVEKA-RKAGI--------S-------KI-EITNDPKEV 169 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~-~g~~~~~~~P~~~~~~~~~~~~~-~~~g~--------~-------~i-~~~~d~~~a 169 (261)
.||+++|- +++..+++..++. -|.++++... +..+++.++.+ ++.|. . .+ ..+.|++++
T Consensus 3 mkI~ViGa-G~~G~~~a~~La~~~G~~V~~~~~--~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 3 VKVCVCGG-GNGAHTLSGLAASRDGVEVRVLTL--FADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSTTEEEEEECC--STTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCEEEEEeC--CCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 58999995 8899999888877 4888887751 11223344442 22220 1 11 267789999
Q ss_pred hCCCCEEEEec
Q 024871 170 VQGADVVYSDV 180 (261)
Q Consensus 170 ~~~aDviy~~~ 180 (261)
++++|+|+...
T Consensus 80 ~~~aD~Vilav 90 (404)
T 3c7a_A 80 ISGADVVILTV 90 (404)
T ss_dssp HTTCSEEEECS
T ss_pred hCCCCEEEEeC
Confidence 99999988864
No 308
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=60.45 E-value=23 Score=31.07 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=41.1
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhc--------CCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--C
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASV--------IPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--G 172 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~--------~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~ 172 (261)
.+-+.+||++||- +++.+..+.+... -+.+++-+|-..-+- ..+.++++|.. ..++|.++.++ +
T Consensus 21 ~~MkkirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~---a~~~a~~~g~~--~~y~d~~ell~~~~ 94 (393)
T 4fb5_A 21 QSMKPLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGL---AEARAGEFGFE--KATADWRALIADPE 94 (393)
T ss_dssp ---CCCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TT---HHHHHHHHTCS--EEESCHHHHHHCTT
T ss_pred cCCCCccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHH---HHHHHHHhCCC--eecCCHHHHhcCCC
Confidence 3457799999996 4554443333222 146777555322211 12345677754 46889999986 5
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
.|+|+.-+
T Consensus 95 iDaV~Iat 102 (393)
T 4fb5_A 95 VDVVSVTT 102 (393)
T ss_dssp CCEEEECS
T ss_pred CcEEEECC
Confidence 78887754
No 309
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=60.43 E-value=20 Score=26.85 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=45.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCH---HH-HhCCCCEEEEe
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDP---KE-VVQGADVVYSD 179 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~---~~-a~~~aDviy~~ 179 (261)
.+.+|+++|- +++..+++..+...|.+++++.. +++..+.+++.|. .+..- .|. ++ .++++|+|+..
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~-----~~~~~~~~~~~~~-~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDK-----SKEKIELLEDEGF-DAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES-----CHHHHHHHHHTTC-EEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEEC-----CHHHHHHHHHCCC-cEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4578999996 77999999988888988887754 4455566666663 22221 121 12 15789998876
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 78 ~ 78 (141)
T 3llv_A 78 G 78 (141)
T ss_dssp C
T ss_pred c
Confidence 4
No 310
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=60.21 E-value=14 Score=32.43 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=21.7
Q ss_pred CcccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 200 FQVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 200 y~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
..+++++++..+..++=+|| ||.+||
T Consensus 176 ~il~~~~l~~~~~~~iNiHpSlLP~~rG 203 (287)
T 3nrb_A 176 QILSDDLSAFLSGRCINIHHSFLPGFKG 203 (287)
T ss_dssp SCCCHHHHHHHTTSEEEEESSCTTTTCS
T ss_pred hhcCHHHHhhccCCeEEECcccccCCCC
Confidence 34788888888888999999 899875
No 311
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=60.03 E-value=14 Score=28.50 Aligned_cols=61 Identities=11% Similarity=0.055 Sum_probs=45.3
Q ss_pred CcEEEEEcCC---CchHHHHHHHHhcCCcEEEEeCCC--CCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDG---NNIVHSWLLMASVIPFHFVCACPK--GFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~~P~--~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
-++|++||-. ++..+.++.-+...|++++.+.|+ +-.+ ..+..++++++..+..|++..-.
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i-------------~G~~~~~sl~el~~~vDlavi~v 78 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEEL-------------FGEEAVASLLDLKEPVDILDVFR 78 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEE-------------TTEECBSSGGGCCSCCSEEEECS
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcC-------------CCEEecCCHHHCCCCCCEEEEEe
Confidence 5799999964 467777777777788899888886 3111 12566788999888999887754
No 312
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=59.81 E-value=40 Score=31.22 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=48.3
Q ss_pred CCCCCcEEEEEcCC-----Cc----hHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHH---H-----HhCCCeEEEEcC
Q 024871 103 GRLEGTKVVYVGDG-----NN----IVHSWLLMASVIPFHFVCACPKGFEPDKETVEKA---R-----KAGISKIEITND 165 (261)
Q Consensus 103 g~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~---~-----~~g~~~i~~~~d 165 (261)
+.++|+||++.|=. .. -+..++..+...|.++.+.-|.- ..++..+.. + +.. ..+.+.++
T Consensus 325 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 401 (467)
T 2q3e_A 325 NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKV--PREQIVVDLSHPGVSEDDQVS-RLVTISKD 401 (467)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSS--CHHHHHHHHCC------CHHH-HHEEECSS
T ss_pred cccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCcc--CHHHHhhhhcccccccccccc-CceeecCC
Confidence 45899999999931 12 34446667777899998887742 111111110 0 000 14677788
Q ss_pred HHHHhCCCCEEEEe-ccc
Q 024871 166 PKEVVQGADVVYSD-VWA 182 (261)
Q Consensus 166 ~~~a~~~aDviy~~-~w~ 182 (261)
+++++++||+|... .|.
T Consensus 402 ~~~~~~~ad~~vi~t~~~ 419 (467)
T 2q3e_A 402 PYEACDGAHAVVICTEWD 419 (467)
T ss_dssp HHHHHTTCSEEEECSCCG
T ss_pred HHHHHhCCcEEEEecCCh
Confidence 99999999997765 464
No 313
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=59.76 E-value=18 Score=30.96 Aligned_cols=150 Identities=16% Similarity=0.136 Sum_probs=84.0
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccEEEEeeC-CcchH-----HHHhhhCC-C-cEEeC
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVF-GHQDI-----LDLAKFAT-V-PVING 81 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~iv~R~~-~~~~~-----~~~a~~~~-v-PVINa 81 (261)
+++-.=+..++.++|....|..-. + ..|.+++..+.+..-...+-+=.| +...+ .+.|+..+ | -|++-
T Consensus 13 S~SP~~hn~~~~~~gl~~~Y~~~~---v-~~~~l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~A~~iGAvNTi~~~ 88 (253)
T 3u62_A 13 SISPRLYNEYFKRAGMNHSYGMEE---I-PPESFDTEIRRILEEYDGFNATIPHKERVMRYVEPSEDAQRIKAVNCVFRG 88 (253)
T ss_dssp CSHHHHHHHHHHHHTCCCEEEEEE---C-CGGGHHHHHHHHHHHCSEEEECTTCTTGGGGGSEECHHHHHHTCCCEEETT
T ss_pred cccHHHHHHHHHHcCCCCEEEeEe---c-CHHHHHHHHHHHhhCCCceeecCChHHHHHHHhCCCHHHHHcCcceEeecC
Confidence 344455778888999887664321 1 136788888776522455544443 22222 12222211 1 13331
Q ss_pred CCCCCChhHHHHHHHHHHHHhC--CCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCC
Q 024871 82 LTDYNHPCQIMADALTIIEHVG--RLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGIS 158 (261)
Q Consensus 82 ~~~~~HPtQ~L~Dl~Ti~e~~g--~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~ 158 (261)
..|=| |..-+.+.+. +++| +++++|- ++++.+.+..+...|. +++++... + +++++....
T Consensus 89 ---~G~NT----D~~G~~~~l~~~~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~-----~---~ka~~la~~ 151 (253)
T 3u62_A 89 ---KGYNT----DWVGVVKSLEGVEVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRT-----I---ERAKALDFP 151 (253)
T ss_dssp ---EEECC----HHHHHHHHTTTCCCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESC-----H---HHHHTCCSS
T ss_pred ---EEEcc----hHHHHHHHHHhcCCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----H---HHHHHHHHH
Confidence 22222 3333332221 5789 9999996 7888888888888887 78777542 1 223332100
Q ss_pred -eEEEEcCHHHHhCCCCEEEEec
Q 024871 159 -KIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 159 -~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.....++++++++++|+|+...
T Consensus 152 ~~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 152 VKIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CEEEEGGGHHHHHHTCSEEEECS
T ss_pred cccCCHHHHHhhhcCCCEEEECC
Confidence 1123567788899999999754
No 314
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=59.72 E-value=12 Score=33.55 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=43.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHHH--h-CCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKARK--A-GISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~--~-g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
....||+++|- ++|..+.+..+..-|. ++++.-...-......++...- . +...+..+.|.+ ++++||+|+..
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 56789999996 7788777766655564 7777654210011111121111 1 123455566765 79999998875
No 315
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=59.53 E-value=30 Score=30.16 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=44.5
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCC---cEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIP---FHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g---~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+||++||- +++.+.++..+...+ ++++-++- .+++.. +.+++.|.. ..+.|.++.++ +.|+||.-.
T Consensus 3 ~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av~d----~~~~~a~~~a~~~~~~--~~~~~~~~ll~~~~vD~V~i~t 74 (334)
T 3ohs_X 3 LRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAVAA----RDLSRAKEFAQKHDIP--KAYGSYEELAKDPNVEVAYVGT 74 (334)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEEEC----SSHHHHHHHHHHHTCS--CEESSHHHHHHCTTCCEEEECC
T ss_pred cEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEEEc----CCHHHHHHHHHHcCCC--cccCCHHHHhcCCCCCEEEECC
Confidence 68999995 777777777776654 46665443 233332 345566643 34789999987 689999864
No 316
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=59.44 E-value=41 Score=29.21 Aligned_cols=68 Identities=15% Similarity=0.272 Sum_probs=44.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHh-cC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMAS-VI-PFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~-~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+.+||++||- +++.+..+..+. .. +++++.++- .+++..+ .+++.|.. ..++|.++.++ ++|+|+.-.
T Consensus 7 ~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d----~~~~~~~~~a~~~g~~--~~~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 7 KPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACA----LDSNQLEWAKNELGVE--TTYTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp CCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEEC----SCHHHHHHHHHTTCCS--EEESCHHHHHTTSCCSEEEECS
T ss_pred CcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEec----CCHHHHHHHHHHhCCC--cccCCHHHHhcCCCCCEEEEeC
Confidence 3479999996 667777776665 43 677664432 2333333 34445632 45789999987 699998754
No 317
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=59.09 E-value=94 Score=27.33 Aligned_cols=130 Identities=12% Similarity=0.143 Sum_probs=72.1
Q ss_pred CEeeccCCChhhHHHHHHHHHhc--------CCeEEEeCCCCcCC-CCCCCHHHHHHHHhhhccEEEEeeCCcc---hHH
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLL--------GGHAIYLGPDDIQM-GKREETRDAARVLCRYNDIIMARVFGHQ---DIL 68 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~L--------Gg~~~~l~~~~s~~-~kgEs~~Dt~~~ls~~~D~iv~R~~~~~---~~~ 68 (261)
++.+|...+...+..|+.|+.+. +|..+.+...++.- ...+.+.-.-+.++.-+.+|+= +.... .+.
T Consensus 8 IG~i~~~sg~~~~~a~~lAv~eiN~~g~ill~g~~l~~~~~D~~~~d~~~a~~~a~~li~~~V~aiiG-~~~S~~~~a~~ 86 (389)
T 3o21_A 8 IGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFG-FYDQMSMNTLT 86 (389)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHSCCCTTTCSSEEEEEEEECCTTCHHHHHHHHHHHHTTTCSCEEE-CCCTTTHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHhcCccccCCCcEEEEEEEecCCCChHHHHHHHHHHHhcCcEEEEe-CCChhHHHHHH
Confidence 47788888888999999999873 44444432222211 1112222222333332333332 33332 355
Q ss_pred HHhhhCCCcEEeC--C--CCC-----CChh--HHHHHHHHHHHHhCCCCCcEEEEEcCC---CchHHHHHHHHhcCCcEE
Q 024871 69 DLAKFATVPVING--L--TDY-----NHPC--QIMADALTIIEHVGRLEGTKVVYVGDG---NNIVHSWLLMASVIPFHF 134 (261)
Q Consensus 69 ~~a~~~~vPVINa--~--~~~-----~HPt--Q~L~Dl~Ti~e~~g~l~~~~i~~vGd~---~~v~~S~~~~~~~~g~~~ 134 (261)
.+++..++|+|.. . +.. ..|. +++++++ +++| .++|+++.|. ......+...+...|..+
T Consensus 87 ~i~~~~~iP~Is~s~~~~~~~~~~~~~~p~~~~a~~~~~---~~~g---w~~vaii~d~~~g~~~~~~~~~~~~~~g~~v 160 (389)
T 3o21_A 87 SFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLL---SYYK---WEKFVYLYDTERGFSVLQAIMEAAVQNNWQV 160 (389)
T ss_dssp HHHHHHTCCEEECSCCCSSCCSSEEECSCCSHHHHHHHH---HHHT---CCEEEEEECSTTCSHHHHHHHHHHHHTTCEE
T ss_pred HHhccCCCceeecCCCCccCCceEEEEccCHHHHHHHHH---HhCC---CCEEEEEEcCcHHHHHHHHHHHHhhcCCCeE
Confidence 7778889999942 1 111 1243 4555653 4554 6788888863 235666777777778776
Q ss_pred EEe
Q 024871 135 VCA 137 (261)
Q Consensus 135 ~~~ 137 (261)
+..
T Consensus 161 ~~~ 163 (389)
T 3o21_A 161 TAR 163 (389)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 318
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=58.79 E-value=47 Score=31.16 Aligned_cols=69 Identities=16% Similarity=0.086 Sum_probs=48.0
Q ss_pred CCcEEeCCCCCCChhHHHHHHHHHHHH---hC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC--------CCCC
Q 024871 75 TVPVINGLTDYNHPCQIMADALTIIEH---VG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC--------PKGF 142 (261)
Q Consensus 75 ~vPVINa~~~~~HPtQ~L~Dl~Ti~e~---~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~--------P~~~ 142 (261)
+.|+--|++...-+.-+.-=++.+++. .| +++|+||++-|- +||....++.+...|.+++.++ |.|+
T Consensus 199 Gk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gi 277 (450)
T 4fcc_A 199 GKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGS-GNVAQYAIEKAMEFGARVITASDSSGTVVDESGF 277 (450)
T ss_dssp SCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCC
T ss_pred CCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCC
Confidence 345544554444455566666666543 33 699999999995 8999999999889999987654 6666
Q ss_pred CC
Q 024871 143 EP 144 (261)
Q Consensus 143 ~~ 144 (261)
.+
T Consensus 278 d~ 279 (450)
T 4fcc_A 278 TK 279 (450)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 319
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=58.71 E-value=32 Score=34.04 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=46.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-----------hC----------CCeEEEEcCH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-----------AG----------ISKIEITNDP 166 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-----------~g----------~~~i~~~~d~ 166 (261)
.||++||- +.+..+++..++.-|.++++.-. +++.++.+++ .| ...+..+.|+
T Consensus 313 ~kV~VIGa-G~MG~~iA~~la~aG~~V~l~D~-----~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~ 386 (725)
T 2wtb_A 313 KKVAIIGG-GLMGSGIATALILSNYPVILKEV-----NEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY 386 (725)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCCEEEECS-----SHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS
T ss_pred cEEEEEcC-CHhhHHHHHHHHhCCCEEEEEEC-----CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH
Confidence 47999995 78899998888888988887643 2333322211 12 1347788888
Q ss_pred HHHhCCCCEEEEec
Q 024871 167 KEVVQGADVVYSDV 180 (261)
Q Consensus 167 ~~a~~~aDviy~~~ 180 (261)
+++++||+|+.-.
T Consensus 387 -~~~~~aDlVIeaV 399 (725)
T 2wtb_A 387 -ESFRDVDMVIEAV 399 (725)
T ss_dssp -GGGTTCSEEEECC
T ss_pred -HHHCCCCEEEEcC
Confidence 6899999999875
No 320
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=58.63 E-value=53 Score=27.87 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=60.1
Q ss_pred hHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhh-hccEEEEeeCCc--chHHHHhhhCCCcEEeCCCC----
Q 024871 12 TRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCR-YNDIIMARVFGH--QDILDLAKFATVPVINGLTD---- 84 (261)
Q Consensus 12 TR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~-~~D~iv~R~~~~--~~~~~~a~~~~vPVINa~~~---- 84 (261)
.+..++.|+.+.+|..+.+-..++.-...+..+-.-+.+++ -+|+|+.=..+. ..+..+++..++|+|.....
T Consensus 27 ~~~g~~~a~~~i~g~~i~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~ 106 (362)
T 3snr_A 27 ERNALEFVVKEISGHPIKIIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITP 106 (362)
T ss_dssp HHHGGGGSCSEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCT
T ss_pred HHHHHHHHHHHhCCeEEEEEEecCCCCHHHHHHHHHHHHhccCceEEEcCCCcHHHHHHHHHHHHcCccEEEecCCcccc
Confidence 45566667777777655442211111111111222234455 478877532221 23445667779999985421
Q ss_pred CCCh---------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHHHHHHHHhcCCcEEE
Q 024871 85 YNHP---------CQIMADALTIIEHVGRLEGTKVVYVGDGNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 85 ~~HP---------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~S~~~~~~~~g~~~~ 135 (261)
...| .+.-..+......+ ..+||+++++... ....+...+...|.+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~ 167 (362)
T 3snr_A 107 ERAKWSVVMPQPIPIMGKVLYEHMKKN---NVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIV 167 (362)
T ss_dssp TTTTTEEECSCCHHHHHHHHHHHHHHT---TCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCcEEecCCChHHHHHHHHHHHHhc---CCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEE
Confidence 1112 23333333333333 3689999976433 33444556667787754
No 321
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=58.49 E-value=27 Score=30.43 Aligned_cols=69 Identities=6% Similarity=0.025 Sum_probs=40.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
.+||++||-+..-....+..+..-+++++-++-..-.-.+ +.++++++ ...+.|.++.++ +.|+||...
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~---~~a~~~~~--~~~~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRA---KFTSLFPS--VPFAASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCH---HHHHHSTT--CCBCSCHHHHHTCTTCCEEEECS
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHH---HHHHhcCC--CcccCCHHHHhhCCCCCEEEEeC
Confidence 4799999974321123343333457887644432222222 23455542 245789999997 689988754
No 322
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=58.35 E-value=24 Score=28.79 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEe
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~ 137 (261)
++|+++.+.|..+.+...++..+..-|.+++++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN 35 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 678999999988889999998888889998877
No 323
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=58.32 E-value=68 Score=27.52 Aligned_cols=79 Identities=9% Similarity=0.042 Sum_probs=39.8
Q ss_pred hccEEEEeeCC--cchHHH--HhhhCCCcEEeCCCCCC-------------ChhHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 024871 53 YNDIIMARVFG--HQDILD--LAKFATVPVINGLTDYN-------------HPCQIMADALTIIEHVGRLEGTKVVYVGD 115 (261)
Q Consensus 53 ~~D~iv~R~~~--~~~~~~--~a~~~~vPVINa~~~~~-------------HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd 115 (261)
-+|+|+.=..+ ...+.. +++..++|+|...+... .+.+....+......+ ..+||+++++
T Consensus 73 ~v~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~---g~~~iaii~~ 149 (364)
T 3lop_A 73 NPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTI---GVTRIGVLYQ 149 (364)
T ss_dssp CEEEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHT---TCCCEEEEEE
T ss_pred CcEEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHc---CCceEEEEEe
Confidence 35666542111 123445 66678899998542111 1222222222222233 3689999986
Q ss_pred CCc----hHHHHHHHHhcCCcEE
Q 024871 116 GNN----IVHSWLLMASVIPFHF 134 (261)
Q Consensus 116 ~~~----v~~S~~~~~~~~g~~~ 134 (261)
... ....+...+...|.++
T Consensus 150 ~~~~g~~~~~~~~~~~~~~G~~v 172 (364)
T 3lop_A 150 EDALGKEAITGVERTLKAHALAI 172 (364)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCC
T ss_pred CchhhHHHHHHHHHHHHHcCCcE
Confidence 433 3444555666667653
No 324
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=58.13 E-value=20 Score=31.48 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=21.3
Q ss_pred cccHHHHHhcCCCcEEeeC--CCCCCC
Q 024871 201 QVDEFLMKLAGPKAYFMHC--LPAERG 225 (261)
Q Consensus 201 ~v~~~~~~~a~~~~~~mH~--lP~~rg 225 (261)
.+++++++..+..++=+|| ||.+||
T Consensus 178 il~~~~l~~~~~~~iNiHpSlLP~~rG 204 (288)
T 3obi_A 178 ILSDEMSARLAGRCINIHHSFLPGFKG 204 (288)
T ss_dssp CCCHHHHHHTTTSEEEEEEECSSCCCS
T ss_pred hCCHHHHhhhcCCeEEeCcccccCCCC
Confidence 4788888888888999999 899875
No 325
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=58.03 E-value=19 Score=33.75 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=46.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-h--CCCeEEEEcCHHHHh---CCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-A--GISKIEITNDPKEVV---QGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~--g~~~i~~~~d~~~a~---~~aDviy~~~ 180 (261)
.+|++|| .+++..+++..+...|.++.+..+ .++.++.+.+ . | ..+..+.|+++++ +++|+|+.-.
T Consensus 3 m~IgvIG-~G~mG~~lA~~La~~G~~V~v~dr-----~~~~~~~l~~~~~~g-~gi~~~~~~~e~v~~l~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNR-----TVSKVDDFLANEAKG-TKVLGAHSLEEMVSKLKKPRRIILLV 74 (482)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-----STHHHHHHHHTTTTT-SSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred CeEEEEC-hHHHHHHHHHHHHHCCCeEEEEeC-----CHHHHHHHHhccccC-CCeEEeCCHHHHHhhccCCCEEEEeC
Confidence 5799999 588888888888778888776643 2333444444 1 1 1356688999887 5999998864
No 326
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=57.89 E-value=25 Score=31.42 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=32.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEP 144 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~ 144 (261)
+.+++|+++|. +...+.++..+..+|++++++.|..-.|
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p 48 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP 48 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 57899999996 6678899999999999999888755444
No 327
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=57.79 E-value=28 Score=30.34 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=49.8
Q ss_pred CChhHHHHHH-----HHHHHHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCe
Q 024871 86 NHPCQIMADA-----LTIIEHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISK 159 (261)
Q Consensus 86 ~HPtQ~L~Dl-----~Ti~e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~ 159 (261)
.+||-+.=|- +.-.+..|.++ |.+|+-.+ .+|...|++..++.+|++.+++-|++ .++.-++.++..| +.
T Consensus 35 ~~ptGSfK~R~a~~~i~~a~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~ 110 (316)
T 1y7l_A 35 RNPSYSVKCRIGANMVWQAEKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPET--MSLERKRLLCGLG-VN 110 (316)
T ss_dssp SSGGGBTHHHHHHHHHHHHHHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTT-CE
T ss_pred CCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcC-CE
Confidence 4677643331 11123345443 34444433 48999999999999999999888977 4455566778888 57
Q ss_pred EEEEcC
Q 024871 160 IEITND 165 (261)
Q Consensus 160 i~~~~d 165 (261)
+..++.
T Consensus 111 v~~~~~ 116 (316)
T 1y7l_A 111 LVLTEG 116 (316)
T ss_dssp EEEECG
T ss_pred EEEeCC
Confidence 776654
No 328
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=57.78 E-value=8.5 Score=33.85 Aligned_cols=68 Identities=10% Similarity=-0.060 Sum_probs=44.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh-----------CCCCE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV-----------QGADV 175 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~-----------~~aDv 175 (261)
.+||++||-++++.+..+..+...+.+++-++-..-.- . ..+++.+ ....+.|.++.+ .+.|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~-~---~~~~~~~--~~~~~~~~~~ll~~~~~l~~~~~~~vD~ 76 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV-G---IIDSISP--QSEFFTEFEFFLDHASNLKRDSATALDY 76 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC-G---GGGGTCT--TCEEESSHHHHHHHHHHHTTSTTTSCCE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH-H---HHHhhCC--CCcEECCHHHHHHhhhhhhhccCCCCcE
Confidence 37999999867777777776666688877665332211 1 1122333 346688988876 57899
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
||.-+
T Consensus 77 V~I~t 81 (318)
T 3oa2_A 77 VSICS 81 (318)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 88854
No 329
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=57.62 E-value=19 Score=31.87 Aligned_cols=165 Identities=13% Similarity=0.061 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchH-------HHHhhhCC-C-cEEe
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDI-------LDLAKFAT-V-PVIN 80 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~-------~~~a~~~~-v-PVIN 80 (261)
++-.=+..++.++|....|..-. + ..|.+.+..+.+... ...+-+=.+-...+ .+.|+..+ | -|+|
T Consensus 45 ~SP~ihn~~f~~~gl~~~Y~~~~---v-~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~ls~~A~~iGAVNTi~~ 120 (312)
T 3t4e_A 45 LSPEMQNKALEKAGLPYTYMAFE---V-DNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN 120 (312)
T ss_dssp SHHHHHHHHHHHHTCSEEEEEEE---C-CTTTHHHHHHHHHHTTCCEEEECTTSHHHHGGGCSEECHHHHHHTCCSEEEE
T ss_pred ccHHHHHHHHHHcCCCcEEEeEe---c-CHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHhhhcCHHHHHhCceeEEEe
Confidence 44455778888999887775321 1 247788888877654 45555444322222 22233221 1 1344
Q ss_pred CCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCC--CCCCHHHHHHHHHhC
Q 024871 81 GLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKG--FEPDKETVEKARKAG 156 (261)
Q Consensus 81 a~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~--~~~~~~~~~~~~~~g 156 (261)
-++ -..|=|-...=+..+.+...+++|++++++|- +.++.+.+..+...|. +++++.-.. ..-.+++.+......
T Consensus 121 ~~g~l~G~NTD~~Gf~~~L~~~~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~ 199 (312)
T 3t4e_A 121 DDGYLRGYNTDGTGHIRAIKESGFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT 199 (312)
T ss_dssp ETTEEEEECHHHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS
T ss_pred cCCEEEEeCCcHHHHHHHHHhcCCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc
Confidence 222 23444544443444444434689999999996 6788888888888898 787775421 111111222222221
Q ss_pred CCeEEEE--cCH---HHHhCCCCEEEEec
Q 024871 157 ISKIEIT--NDP---KEVVQGADVVYSDV 180 (261)
Q Consensus 157 ~~~i~~~--~d~---~~a~~~aDviy~~~ 180 (261)
...+... .++ .+.++++|+|+..+
T Consensus 200 ~~~v~~~~~~~l~~~~~~l~~~DiIINaT 228 (312)
T 3t4e_A 200 DCVVTVTDLADQHAFTEALASADILTNGT 228 (312)
T ss_dssp SCEEEEEETTCHHHHHHHHHHCSEEEECS
T ss_pred CcceEEechHhhhhhHhhccCceEEEECC
Confidence 1233332 343 56788999999875
No 330
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.58 E-value=36 Score=28.13 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=47.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-EcC------HHHHhC------
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-TND------PKEVVQ------ 171 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~~d------~~~a~~------ 171 (261)
++|+++.+.|..+.+...++..+..-|.++++.+-.. .++..+.+++.| ..+.. .-| ++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD---PAPALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC---CHHHHHHHHTTS-CCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 6789999999888899999988888899988775322 244444444444 23332 112 234454
Q ss_pred -CCCEEEEec
Q 024871 172 -GADVVYSDV 180 (261)
Q Consensus 172 -~aDviy~~~ 180 (261)
+.|+|+...
T Consensus 78 g~id~lv~~A 87 (255)
T 2q2v_A 78 GGVDILVNNA 87 (255)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 789999864
No 331
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=57.46 E-value=43 Score=28.26 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=43.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE-----------EEcCHHHHh---CCC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIE-----------ITNDPKEVV---QGA 173 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~-----------~~~d~~~a~---~~a 173 (261)
.||+++|- +++..+++..+..-|.++++... +++..+.+++.|. .+. .+ +.+++. +++
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r-----~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQ-----WPAHIEAIRKNGL-IADFNGEEVVANLPIF-SPEEIDHQNEQV 75 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHHCE-EEEETTEEEEECCCEE-CGGGCCTTSCCC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEEEEEC-----CHHHHHHHHhCCE-EEEeCCCeeEecceee-cchhhcccCCCC
Confidence 58999994 88999998888888888887754 3444555555552 221 11 233444 499
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+|+...
T Consensus 76 d~vi~~v 82 (316)
T 2ew2_A 76 DLIIALT 82 (316)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 9999864
No 332
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=57.28 E-value=39 Score=28.81 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=48.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hCCCeEE--EE--cCHHHHhCCCCEEE
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AGISKIE--IT--NDPKEVVQGADVVY 177 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~--~~--~d~~~a~~~aDviy 177 (261)
..++|+++.++|..+.+..+.+..+...|.+++++.-.. .-.+++.+.... .+...+. ++ ++++++++++|+|+
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~-~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL-DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 458999999999778899999888888899877664321 101112222222 2311121 11 22467788999999
Q ss_pred Eecc
Q 024871 178 SDVW 181 (261)
Q Consensus 178 ~~~w 181 (261)
....
T Consensus 194 n~ag 197 (287)
T 1lu9_A 194 TAGA 197 (287)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8763
No 333
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=57.01 E-value=29 Score=28.35 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=48.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-EcC------HHHHhC-----
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-TND------PKEVVQ----- 171 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~~d------~~~a~~----- 171 (261)
.++|+++.+.|..+.+...++..+..-|.++++++-..-...++..+..+..+ ..+.. .-| ++++++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 36789999999888899999988888899988765431111223333344444 23332 112 334454
Q ss_pred --CCCEEEEecc
Q 024871 172 --GADVVYSDVW 181 (261)
Q Consensus 172 --~aDviy~~~w 181 (261)
+.|+|+...+
T Consensus 83 ~g~id~vi~~Ag 94 (258)
T 3afn_B 83 FGGIDVLINNAG 94 (258)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7999998654
No 334
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=56.89 E-value=22 Score=30.71 Aligned_cols=67 Identities=25% Similarity=0.329 Sum_probs=44.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHH-H-HH-HhC-----CCeEEEEcCHHHHhCCCCEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVE-K-AR-KAG-----ISKIEITNDPKEVVQGADVV 176 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~-~-~~-~~g-----~~~i~~~~d~~~a~~~aDvi 176 (261)
..||+++|- +++..+++..+..-|. +++++... ++..+ . .+ +.+ ...+..+.+. ++++++|+|
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~V 79 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA-----KERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMV 79 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEE
Confidence 479999996 8888888887777777 88877653 22222 1 11 121 1345555564 689999999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 80 ii~v 83 (319)
T 1lld_A 80 VITA 83 (319)
T ss_dssp EECC
T ss_pred EECC
Confidence 8864
No 335
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=55.89 E-value=31 Score=29.93 Aligned_cols=60 Identities=13% Similarity=0.252 Sum_probs=44.6
Q ss_pred HhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 101 HVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 101 ~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
..|.++ |.+|+-.+ .+|...+++..++.+|++.+++-|++ .++.-++.++..| +.+..+.
T Consensus 54 ~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~G-a~v~~~~ 114 (303)
T 2v03_A 54 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDN--MSQERRAAMRAYG-AELILVT 114 (303)
T ss_dssp HTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcC-CEEEEEC
Confidence 345443 45665555 48999999999999999999999987 4455566778888 6777765
No 336
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=55.87 E-value=95 Score=26.41 Aligned_cols=169 Identities=11% Similarity=0.110 Sum_probs=91.4
Q ss_pred eccCC--ChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchH----H---HHhhh
Q 024871 4 IFAKP--SMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDI----L---DLAKF 73 (261)
Q Consensus 4 lF~~~--StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~----~---~~a~~ 73 (261)
+|-.| -++...=+..++..+|....+..-. . ..|.+.+.++-+... ++.+-+=.+-...+ . +.|+.
T Consensus 16 viG~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~-~---~~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~~~~a~~ 91 (287)
T 1nvt_A 16 LIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFD-V---LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQL 91 (287)
T ss_dssp EEESSCTTCSHHHHHHHHHHHTTCCEEEEEEE-C---CGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEECHHHHH
T ss_pred EECCCcccccCHHHHHHHHHHcCCCcEEEEEE-c---CHHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhcCHHHHH
Confidence 44455 3445555688999999987765332 1 136777887777553 45666654433222 1 22221
Q ss_pred --CCCcEEeCCCC-CCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHH
Q 024871 74 --ATVPVINGLTD-YNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVE 150 (261)
Q Consensus 74 --~~vPVINa~~~-~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~ 150 (261)
+-=+++|-.+. ..+=|-...=+..+.+...+++|++++++|-+ .+..+.+..+...| +++++.-.. .-.+++.+
T Consensus 92 igavnt~~~~~g~l~g~nTd~~G~~~~L~~~~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~-~~~~~l~~ 168 (287)
T 1nvt_A 92 IGAVNTIKIEDGKAIGYNTDGIGARMALEEEIGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTV-EKAEALAK 168 (287)
T ss_dssp HTCCCEEEEETTEEEEECCHHHHHHHHHHHHHCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSH-HHHHHHHH
T ss_pred hCceeeEEeeCCEEEEecCCHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCH-HHHHHHHH
Confidence 22255542221 11112111111122233236899999999975 99999999999999 988875321 00012222
Q ss_pred HHHHhCC-C---eEEEEcCHHHHhCCCCEEEEec
Q 024871 151 KARKAGI-S---KIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 151 ~~~~~g~-~---~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.....+. . .+... ++.+.+.++|+|+...
T Consensus 169 ~~~~~~~~~~~~~~d~~-~~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 169 EIAEKLNKKFGEEVKFS-GLDVDLDGVDIIINAT 201 (287)
T ss_dssp HHHHHHTCCHHHHEEEE-CTTCCCTTCCEEEECS
T ss_pred HHhhhcccccceeEEEe-eHHHhhCCCCEEEECC
Confidence 2111110 0 23333 3466788999999875
No 337
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=55.60 E-value=19 Score=31.42 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeC-CCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCAC-PKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~-P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+.+||++||- +++...++..+... +++++.++ +..-... +.+++.|.. ..+.|.++.++ ++|+||.-.
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~----~~a~~~~~~--~~~~~~~~ll~~~~~D~V~i~t 75 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTLESAQ----AFANKYHLP--KAYDKLEDMLADESIDVIYVAT 75 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCSSTTC----C---CCCCS--CEESCHHHHHTCTTCCEEEECS
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCHHHHH----HHHHHcCCC--cccCCHHHHhcCCCCCEEEECC
Confidence 3579999997 55666666655544 56766444 3221111 123445532 35789999998 789998754
No 338
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=55.38 E-value=52 Score=28.82 Aligned_cols=127 Identities=13% Similarity=0.166 Sum_probs=72.9
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCe-EEEeCCCCcCCCCCCCHHHHHHHHhhh----ccEEEEeeCCcc---hHHHHhh
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGH-AIYLGPDDIQMGKREETRDAARVLCRY----NDIIMARVFGHQ---DILDLAK 72 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~-~~~l~~~~s~~~kgEs~~Dt~~~ls~~----~D~iv~R~~~~~---~~~~~a~ 72 (261)
++.+|...+...+.+|+.|+.+.++. .+.+...+. .+......++....+ +++|+ =+..+. ++..+++
T Consensus 13 IG~~~~~sg~~~~~a~~lAv~~iN~~g~l~~~~~D~---~~~d~~~a~~~~~~l~~~~V~aii-G~~~S~~~~a~~~~~~ 88 (384)
T 3saj_A 13 IGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQIDIV---NISDSFEMTYRFCSQFSKGVYAIF-GFYERRTVNMLTSFCG 88 (384)
T ss_dssp EEEEESCSSSHHHHHHHHHHTTCCSSSEEEEEEEEC---CTTCHHHHHHHHHHHHHTTCSCEE-ECCCHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhcCCccceeeEec---ccCchhhHHHHHHHHHhcCeEEEE-CCCCHHHHHHHHHHhc
Confidence 46788888889999999999999885 332211111 111223444444333 33333 333332 3456677
Q ss_pred hCCCcEEeCCC----CC-----CChh--HHHHHHHHHHHHhCCCCCcEEEEEcCC---CchHHHHHHHHhcCCcEEEEe
Q 024871 73 FATVPVINGLT----DY-----NHPC--QIMADALTIIEHVGRLEGTKVVYVGDG---NNIVHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 73 ~~~vPVINa~~----~~-----~HPt--Q~L~Dl~Ti~e~~g~l~~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~ 137 (261)
..++|+|.... .. ..|+ +++++++ +++| .++|+++.|. ......+...+...|..+...
T Consensus 89 ~~~iP~is~~~~~~~~~~~~~~~~p~~~~a~~~~~---~~~g---~~~v~ii~d~~~g~~~~~~~~~~~~~~g~~v~~~ 161 (384)
T 3saj_A 89 ALHVCFITPSFPVDTSNQFVLQLRPELQEALISII---DHYK---WQTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAV 161 (384)
T ss_dssp HHTCCEEECSCCCSSCCTTEEECSCCCHHHHHHHH---HHTT---CCEEEEEECSTTCSHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCCeEeccccCcCccCceEEecccHHHHHHHHH---HHCC---CcEEEEEEeCchhHHHHHHHHHHhhhcCceEEEE
Confidence 88999998421 11 1344 3555653 4443 6889888863 235666666666667666543
No 339
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=55.31 E-value=36 Score=29.52 Aligned_cols=60 Identities=15% Similarity=0.167 Sum_probs=43.2
Q ss_pred HhCCCCC-cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 101 HVGRLEG-TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 101 ~~g~l~~-~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
..|.++. .+| +.+-.+|...+++..++.+|++.+++-|++ .++.-++.++..| +.+..+.
T Consensus 60 ~~g~~~~g~~v-v~assGN~g~alA~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~G-a~v~~~~ 120 (313)
T 2q3b_A 60 QAGLIKPDTII-LEPTSGNTGIALAMVCAARGYRCVLTMPET--MSLERRMLLRAYG-AELILTP 120 (313)
T ss_dssp HTTCCCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HcCCCCCCCEE-EEeCCCHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHCC-CEEEEeC
Confidence 3454432 343 445568999999999999999999999987 3455566777888 5777665
No 340
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=55.06 E-value=44 Score=29.54 Aligned_cols=71 Identities=18% Similarity=0.114 Sum_probs=45.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHh-cC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMAS-VI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~-~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
-+.+||++||- +++....+..+. .. +++++.++-..- +...+.+++.|. ....++|+++.++ +.|+|+.-.
T Consensus 21 m~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~---~~~~~~a~~~g~-~~~~~~~~~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 21 GMTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVA---GRAQAALDKYAI-EAKDYNDYHDLINDKDVEVVIITA 95 (357)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSST---THHHHHHHHHTC-CCEEESSHHHHHHCTTCCEEEECS
T ss_pred CCeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCH---HHHHHHHHHhCC-CCeeeCCHHHHhcCCCCCEEEEcC
Confidence 34589999996 667777776665 43 678774443221 122234556662 2466889999987 589988754
No 341
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=55.01 E-value=8.4 Score=30.02 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=43.3
Q ss_pred CcEEEEEcCC---CchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDG---NNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
-++|++||-. +++.+.++.-+...|++++.+.|+... +++ .| +..+.++++..+.+|+++.-.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g--~~i------~G---~~~~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAG--KTL------LG---QQGYATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTT--SEE------TT---EECCSSTTTCSSCCSEEECCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccc--ccc------CC---eeccCCHHHcCCCCCEEEEEe
Confidence 5789999974 456666665555667788888886420 000 12 466788888888999988865
No 342
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=54.81 E-value=56 Score=30.48 Aligned_cols=66 Identities=15% Similarity=0.112 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhCC---CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 92 MADALTIIEHVGR---LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 92 L~Dl~Ti~e~~g~---l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
+.=|+.++|+|+. |+|.||+-+=-..--.--+++.+...|.++..++.+-|...++...-+.+.|+
T Consensus 25 mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi 93 (436)
T 3h9u_A 25 MPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAKRGI 93 (436)
T ss_dssp CHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCcHHHHHHHHhcCC
Confidence 3447888998863 99999887655444344577888889999999888888888887665566674
No 343
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=54.49 E-value=45 Score=28.77 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=38.2
Q ss_pred cCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcC
Q 024871 114 GDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITND 165 (261)
Q Consensus 114 Gd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d 165 (261)
.-.+|...+++..++.+|++++++-|++ .++.-++.++..| +.+..++.
T Consensus 68 assGN~g~a~A~~a~~~G~~~~i~~p~~--~~~~k~~~~~~~G-a~V~~~~~ 116 (304)
T 1ve1_A 68 PTSGNTGIGLAMIAASRGYRLILTMPAQ--MSEERKRVLKAFG-AELVLTDP 116 (304)
T ss_dssp SCCSHHHHHHHHHHHHHTCEEEEEEETT--CCHHHHHHHHHTT-CEEEEECT
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEEeCCC--CCHHHHHHHHHcC-CEEEEECC
Confidence 4458999999999999999999998987 3455566777888 57776654
No 344
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=54.30 E-value=25 Score=30.67 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh----------CCCCEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV----------QGADVV 176 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~----------~~aDvi 176 (261)
-+||++||-++++.+..+..+...+.+++-++-..-.- . ..++..+ ....+.|.++.+ .+.|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~-~---~~~~~~~--~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV-G---LVDSFFP--EAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC-G---GGGGTCT--TCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH-H---HHHhhCC--CCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 37999999866777777776666688877555322111 1 1122233 346788988877 678998
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
|.-+
T Consensus 77 ~I~t 80 (312)
T 3o9z_A 77 SIAS 80 (312)
T ss_dssp EECS
T ss_pred EECC
Confidence 8754
No 345
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=54.08 E-value=40 Score=28.72 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=47.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE---cCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT---NDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~---~d~~~a~~~aDviy~~~ 180 (261)
.|.+|++.|..+.+.+..+.++...|.+++.++... +-++.+++.|...+.-. ++..+.++++|+++- .
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~ 196 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP-----EKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-V 196 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG-----GGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-C
Confidence 578999999878899999999988999887766532 22345667774332212 223445578999887 5
No 346
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=54.05 E-value=59 Score=30.61 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=48.9
Q ss_pred HHHHHHHHhC---CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 94 DALTIIEHVG---RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 94 Dl~Ti~e~~g---~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
=|+.++|+|+ .|+|.||+-+=-..--..-+++.+...|.++..++.+-|...++...-+.+.|+
T Consensus 29 ~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~STqd~~aaal~~~gi 95 (464)
T 3n58_A 29 GLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGT 95 (464)
T ss_dssp HHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCCcHHHHHHHHhcCC
Confidence 3788889886 399999887655444344578888889999999998888888877665556674
No 347
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=54.03 E-value=42 Score=29.16 Aligned_cols=68 Identities=25% Similarity=0.375 Sum_probs=45.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC----------CeEEEEcCHHHHhCCCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI----------SKIEITNDPKEVVQGAD 174 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~----------~~i~~~~d~~~a~~~aD 174 (261)
+...||+++|- +++...++..++.-|.++++. .. ++.++..++.|. ..+..++|+++ ++++|
T Consensus 17 ~~~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~-~~-----~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 17 FQGMKVAIMGA-GAVGCYYGGMLARAGHEVILI-AR-----PQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp ---CEEEEESC-SHHHHHHHHHHHHTTCEEEEE-CC-----HHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCS
T ss_pred ccCCcEEEECc-CHHHHHHHHHHHHCCCeEEEE-Ec-----HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCC
Confidence 56789999995 778888888777778888776 42 444555665541 11234667654 69999
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+...
T Consensus 89 ~vilav 94 (318)
T 3hwr_A 89 LVLFCV 94 (318)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 988864
No 348
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=53.99 E-value=22 Score=32.20 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=43.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC--CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI--PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~--g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
..+||++||-+ ...-.+.+.... +++++-++-.. .+...+.++++|+ ..+.|.++.+++.|++|.-.
T Consensus 6 ~~~rv~VvG~G--~g~~h~~a~~~~~~~~elvav~~~~---~~~a~~~a~~~gv---~~~~~~~~l~~~~D~v~i~~ 74 (372)
T 4gmf_A 6 PKQRVLIVGAK--FGEMYLNAFMQPPEGLELVGLLAQG---SARSRELAHAFGI---PLYTSPEQITGMPDIACIVV 74 (372)
T ss_dssp -CEEEEEECST--TTHHHHHTTSSCCTTEEEEEEECCS---SHHHHHHHHHTTC---CEESSGGGCCSCCSEEEECC
T ss_pred CCCEEEEEehH--HHHHHHHHHHhCCCCeEEEEEECCC---HHHHHHHHHHhCC---CEECCHHHHhcCCCEEEEEC
Confidence 35899999964 344455555555 47877444322 1233445677874 35789999999999988743
No 349
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=53.81 E-value=44 Score=28.87 Aligned_cols=184 Identities=12% Similarity=0.050 Sum_probs=94.5
Q ss_pred HHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhhccE--EEEeeCCcchH-------HHHhhh---CCCcEEeC
Q 024871 14 VSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDI--IMARVFGHQDI-------LDLAKF---ATVPVING 81 (261)
Q Consensus 14 ~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~~D~--iv~R~~~~~~~-------~~~a~~---~~vPVINa 81 (261)
.=+..++.++|....++.-. + ..+.+.+.+..+..+-++ +-+=.+--..+ .+.|+. .+.=+.+.
T Consensus 23 ~ihn~~f~~~gl~~~Y~~~~---v-~~~~l~~~~~~l~~~~~~~G~nVTiP~K~~~~~~lD~ls~~A~~iGAVNTi~~~~ 98 (269)
T 3tum_A 23 QNFNTWFNHNNCNLAMLPID---L-HEAALDSFADTLRGWQNLRGCVVTVPYKQALANRVDGLSERAAALGSINVIRRER 98 (269)
T ss_dssp HHHHHHHHHTTCSEEEEEEE---B-CGGGHHHHHHHHHHBTTEEEEEECTTCHHHHHTTSSEECHHHHHHTCCSEEEECT
T ss_pred HHHHHHHHHcCCCeEEEEee---c-CHhhHHHHHHHHHhccCCCeeEeccccHHHHHHHhccCCHHHHHcCceeEEEECC
Confidence 34677888999988775322 1 135577777776655333 22222211111 122322 22223333
Q ss_pred CC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCe
Q 024871 82 LT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISK 159 (261)
Q Consensus 82 ~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~ 159 (261)
+| -..|=|-...=+..+++....+++++++++|- +..+++.+..+...|. +++++... ..-.+++.+...... ..
T Consensus 99 dG~l~G~NTD~~Gf~~~L~~~g~~~~~~~~lilGa-GGaarai~~aL~~~g~~~i~i~nRt-~~ra~~la~~~~~~~-~~ 175 (269)
T 3tum_A 99 DGRLLGDNVDGAGFLGAAHKHGFEPAGKRALVIGC-GGVGSAIAYALAEAGIASITLCDPS-TARMGAVCELLGNGF-PG 175 (269)
T ss_dssp TSCEEEECCHHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-HHHHHHHHHHHHHHC-TT
T ss_pred CCEEEEEEcChHHHHHHHHHhCCCcccCeEEEEec-HHHHHHHHHHHHHhCCCeEEEeCCC-HHHHHHHHHHHhccC-Cc
Confidence 43 23344433333344445434689999999996 6677888777777785 77777532 111112222222222 22
Q ss_pred EEEEcCHHHHhCCCCEEEEecccCcchhHHHHHHHhhhcCCcccHHHHHhcCCCcE
Q 024871 160 IEITNDPKEVVQGADVVYSDVWASMGQKEEAAYRKQAFQGFQVDEFLMKLAGPKAY 215 (261)
Q Consensus 160 i~~~~d~~~a~~~aDviy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~~~~a~~~~~ 215 (261)
..+... .+.++++|+|+-.+=..|... .+.-++.+.++..+++.+
T Consensus 176 ~~~~~~-~~~~~~~dliiNaTp~Gm~~~----------~~~p~~~~~~~~l~~~~~ 220 (269)
T 3tum_A 176 LTVSTQ-FSGLEDFDLVANASPVGMGTR----------AELPLSAALLATLQPDTL 220 (269)
T ss_dssp CEEESC-CSCSTTCSEEEECSSTTCSTT----------CCCSSCHHHHHTCCTTSE
T ss_pred ceehhh-hhhhhcccccccCCccccCCC----------CCCCCChHHHhccCCCcE
Confidence 333333 456889999988752233211 123466666655544443
No 350
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=53.77 E-value=56 Score=28.77 Aligned_cols=70 Identities=21% Similarity=0.216 Sum_probs=48.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh------CCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV------QGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~------~~aDvi 176 (261)
-.|.+|++.| .+.+....+.++..+|.+++.++. .++-++.+++.|...+.-. ++..+.+ +++|++
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~-----~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS-----SREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES-----CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec-----CchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 3678999999 788999999999999998877654 3455677888885332211 2333333 268888
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-..
T Consensus 262 id~~ 265 (363)
T 3uog_A 262 LEIA 265 (363)
T ss_dssp EEET
T ss_pred EECC
Confidence 8654
No 351
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=53.74 E-value=1.1e+02 Score=26.30 Aligned_cols=160 Identities=13% Similarity=0.033 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHHH-------hhh---CCCcEE
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILDL-------AKF---ATVPVI 79 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~~-------a~~---~~vPVI 79 (261)
++-.=+..++.++|....|..-. +. .|.+.+.++.+... ...+-+=.+-...+..+ |+. .+.-+.
T Consensus 16 ~SP~~hn~~f~~~gl~~~Y~~~~---v~-~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~ 91 (272)
T 3pwz_A 16 KSPLIHGLFAQASNQQLEYGAIE---GS-LDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQLARAANALKF 91 (272)
T ss_dssp SHHHHHHHHHHHTTCCEEEEEEE---CC-TTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred ccHHHHHHHHHHcCCCcEEEEEE---cC-HHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEc
Confidence 44455778889999987775322 11 46788888766543 35555544433232222 222 222232
Q ss_pred eCCCCCCChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 80 NGLTDYNHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 80 Na~~~~~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
..+.-..|=|-...=+..|.+..| +++|++++++|- +.+..+.+..+...|+ +++++.-.. +...+.+++.+.
T Consensus 92 ~~g~l~G~NTD~~G~~~~lL~~~~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~----~~a~~la~~~~~ 166 (272)
T 3pwz_A 92 EDGRIVAENFDGIGLLRDIEENLGEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM----AKALALRNELDH 166 (272)
T ss_dssp ETTEEEEECCHHHHHHHHHHTTSCCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH----HHHHHHHHHHCC
T ss_pred cCCeEEEecCCHHHHHHHHHHHcCCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhcc
Confidence 222122233322222222123444 689999999996 5788888888888896 888775421 122222333331
Q ss_pred CeEEEEcCHHHHh-CCCCEEEEec
Q 024871 158 SKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 158 ~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
..+... +.++.- +++|+|+..+
T Consensus 167 ~~~~~~-~~~~l~~~~~DivInaT 189 (272)
T 3pwz_A 167 SRLRIS-RYEALEGQSFDIVVNAT 189 (272)
T ss_dssp TTEEEE-CSGGGTTCCCSEEEECS
T ss_pred CCeeEe-eHHHhcccCCCEEEECC
Confidence 123332 223322 7899999875
No 352
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=53.60 E-value=42 Score=29.11 Aligned_cols=65 Identities=11% Similarity=0.186 Sum_probs=45.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC-------Ce-----EEEEcCHHHHhCCCCE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI-------SK-----IEITNDPKEVVQGADV 175 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~-------~~-----i~~~~d~~~a~~~aDv 175 (261)
.||+++|- +++.-+++..++.-|.++++.+.+.+ +..++.|. +. +..+.|++++.+++|+
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~~-------~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGT-GAIGSFYGALLAKTGHCVSVVSRSDY-------ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDC 74 (320)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHTTCEEEEECSTTH-------HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCChH-------HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCE
Confidence 58999995 77888888777777889998876531 33344331 11 2246788887779999
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
|+...
T Consensus 75 Vilav 79 (320)
T 3i83_A 75 TLLCI 79 (320)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88854
No 353
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=53.48 E-value=68 Score=26.36 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=49.8
Q ss_pred HHHHHHHHhhh-ccEEEEeeCC-cchHHHHhhhCCCcEEeCCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCch-
Q 024871 43 TRDAARVLCRY-NDIIMARVFG-HQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNI- 119 (261)
Q Consensus 43 ~~Dt~~~ls~~-~D~iv~R~~~-~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v- 119 (261)
+.+.++-|.+. +|+|++=.+. |..+.++.+..++|||+ +.++.+... .. ..+.||+++|-..-+
T Consensus 62 l~~~~~~L~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~-------i~~a~~~~~--~~----~~~~rigvlaT~~T~~ 128 (226)
T 2zsk_A 62 LINAAKALERAGAELIAFAANTPHLVFDDVQREVNVPMVS-------IIDAVAEEI--LK----RGVRKVLLLGTKTTMT 128 (226)
T ss_dssp HHHHHHHHHHHTCSEEEESSSGGGGGHHHHHHHCSSCBCC-------HHHHHHHHH--HH----TTCCEEEEESSTTTTS
T ss_pred HHHHHHHHHHcCCCEEEECCCcHHHHHHHHHHhCCCCEec-------cHHHHHHHH--HH----cCCCeEEEEeCHHHHh
Confidence 34455555554 7999998875 44578888888999998 334444433 11 237899999853211
Q ss_pred HHHHHHHHhcCCcEEEEe
Q 024871 120 VHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 120 ~~S~~~~~~~~g~~~~~~ 137 (261)
..-+-..+..+|+++++.
T Consensus 129 ~~~y~~~l~~~g~~v~~~ 146 (226)
T 2zsk_A 129 ADFYIKTLEEKGLEVVVP 146 (226)
T ss_dssp CHHHHHHHHTTTCEEECC
T ss_pred hhHHHHHHHHCCCEEEcc
Confidence 112233445568887633
No 354
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=53.28 E-value=28 Score=30.76 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=42.8
Q ss_pred CCCcEEEEEcCCCchHH-HHHHHHhcC-CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEEEe
Q 024871 105 LEGTKVVYVGDGNNIVH-SWLLMASVI-PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVYSD 179 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~-S~~~~~~~~-g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~ 179 (261)
-+.+||++||- +++.. ..+..+... +++++.++- .+++.. +.+++.|. ..+.|+++.++ +.|+||.-
T Consensus 25 m~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d----~~~~~~~~~a~~~g~---~~~~~~~~ll~~~~~D~V~i~ 96 (350)
T 3rc1_A 25 ANPIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIAS----RRWDRAKRFTERFGG---EPVEGYPALLERDDVDAVYVP 96 (350)
T ss_dssp -CCEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEE----SSHHHHHHHHHHHCS---EEEESHHHHHTCTTCSEEEEC
T ss_pred CCceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEc----CCHHHHHHHHHHcCC---CCcCCHHHHhcCCCCCEEEEC
Confidence 34689999996 55555 455555555 678774432 222322 34456664 33479999997 58999985
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 97 t 97 (350)
T 3rc1_A 97 L 97 (350)
T ss_dssp C
T ss_pred C
Confidence 4
No 355
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=53.25 E-value=32 Score=26.33 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=44.2
Q ss_pred cEEEEEcCCCchHHHHH-HHH--hcC--CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE--EEcCH-HHHhCCCCEEEEe
Q 024871 108 TKVVYVGDGNNIVHSWL-LMA--SVI--PFHFVCACPKGFEPDKETVEKARKAGISKIE--ITNDP-KEVVQGADVVYSD 179 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~-~~~--~~~--g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~--~~~d~-~~a~~~aDviy~~ 179 (261)
++|.||.- +|+++|-+ ++. ... .+.+.-++-....+++..++.+++.|+. +. ....+ ++-++++|+|++-
T Consensus 4 ~~VLFVC~-gN~cRSpmAEai~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid-~s~~~sr~l~~~~~~~~D~Ii~m 81 (139)
T 1jl3_A 4 KIIYFLCT-GNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGID-ISNQTSDIIDSDILNNADLVVTL 81 (139)
T ss_dssp EEEEEEES-SSSSHHHHHHHHHHHHSCTTEEEEEEESSCCCCCHHHHHHHHHTTCC-CTTCCCCBCCHHHHTTCSEEEEC
T ss_pred CeEEEEcC-CchHHHHHHHHHHHHhCCCCEEEEcCcCCCCCCCHHHHHHHHHcCCC-cccCccCcCCHHHhhcCCEEEEe
Confidence 58999984 77888853 322 122 3566655544446888888889998841 11 01112 3457899999996
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 82 ~ 82 (139)
T 1jl3_A 82 C 82 (139)
T ss_dssp S
T ss_pred C
Confidence 3
No 356
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=53.07 E-value=14 Score=31.05 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-EcC------HHHHhC-----
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-TND------PKEVVQ----- 171 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~~d------~~~a~~----- 171 (261)
+++|+++.+.|..+.+...++..+..-|.++++++-..-...+.+.+..++.|. .+.+ .-| .+++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHh
Confidence 589999999998888999999988888999887764322222223333444442 3332 222 223333
Q ss_pred --CCCEEEEec
Q 024871 172 --GADVVYSDV 180 (261)
Q Consensus 172 --~aDviy~~~ 180 (261)
..|+|+...
T Consensus 105 ~g~id~li~nA 115 (271)
T 4iin_A 105 DGGLSYLVNNA 115 (271)
T ss_dssp HSSCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 789988754
No 357
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=52.93 E-value=50 Score=28.83 Aligned_cols=67 Identities=9% Similarity=0.133 Sum_probs=44.8
Q ss_pred cEEEEEcCCCchHHHHHHHHh-c-CCcEEEEeCCCCCCCCHHHHH-HHHHhCCCeEEEEcCHHHHhCC--CCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMAS-V-IPFHFVCACPKGFEPDKETVE-KARKAGISKIEITNDPKEVVQG--ADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~-~-~g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~i~~~~d~~~a~~~--aDviy~~~ 180 (261)
+||++||- +++....+..+. . -+++++.++- ++++..+ .+++.|. ....++|+++.+++ +|+|+.-.
T Consensus 3 ~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d----~~~~~~~~~~~~~g~-~~~~~~~~~~ll~~~~~D~V~i~t 74 (344)
T 3mz0_A 3 LRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTD----VNQEAAQKVVEQYQL-NATVYPNDDSLLADENVDAVLVTS 74 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEEC----SSHHHHHHHHHHTTC-CCEEESSHHHHHHCTTCCEEEECS
T ss_pred EEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEc----CCHHHHHHHHHHhCC-CCeeeCCHHHHhcCCCCCEEEECC
Confidence 68999996 667777776665 4 3678774432 2333333 3445552 24668999999876 89988854
No 358
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=52.20 E-value=29 Score=32.07 Aligned_cols=63 Identities=19% Similarity=0.135 Sum_probs=45.0
Q ss_pred CCcEEeCCCCCCChhHHHHHHHHHHHH---hC-C-CCCcEEEEEcCCCchHHHHHHHHhc-CCcEEEEeC
Q 024871 75 TVPVINGLTDYNHPCQIMADALTIIEH---VG-R-LEGTKVVYVGDGNNIVHSWLLMASV-IPFHFVCAC 138 (261)
Q Consensus 75 ~vPVINa~~~~~HPtQ~L~Dl~Ti~e~---~g-~-l~~~~i~~vGd~~~v~~S~~~~~~~-~g~~~~~~~ 138 (261)
+.|+--|++...-+.-+..=++.+++. .| + ++|++|+++| .+||....+..+.. ||++++.++
T Consensus 175 Gk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G-~G~VG~~vA~~l~~~~G~kVv~~s 243 (419)
T 1gtm_A 175 GKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVS 243 (419)
T ss_dssp SCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEc-CCHHHHHHHHHHHHhcCCEEEEEe
Confidence 445544444444455566656666544 45 4 8899999999 48899988988888 999998774
No 359
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=52.04 E-value=15 Score=36.30 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=46.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHH-----------HHhCC----------CeEEEEcCH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKA-----------RKAGI----------SKIEITNDP 166 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~-----------~~~g~----------~~i~~~~d~ 166 (261)
.||++||- +++..+++..++.-|.++++.-.. ++.++.+ .+.|. ..+..+.|+
T Consensus 315 ~kV~VIGa-G~MG~~iA~~la~aG~~V~l~D~~-----~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~ 388 (715)
T 1wdk_A 315 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDIN-----EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY 388 (715)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS
T ss_pred CEEEEECC-ChhhHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH
Confidence 57999995 788888888888889888776442 2332221 12231 137778888
Q ss_pred HHHhCCCCEEEEec
Q 024871 167 KEVVQGADVVYSDV 180 (261)
Q Consensus 167 ~~a~~~aDviy~~~ 180 (261)
+++++||+|+.-.
T Consensus 389 -~~~~~aDlVIeaV 401 (715)
T 1wdk_A 389 -GDFGNVDLVVEAV 401 (715)
T ss_dssp -TTGGGCSEEEECC
T ss_pred -HHHCCCCEEEEcC
Confidence 7899999999865
No 360
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=52.04 E-value=1.7e+02 Score=28.25 Aligned_cols=127 Identities=13% Similarity=0.153 Sum_probs=75.1
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCe--EEEeCCCCcCCCCCCCHHHHHHHHhhh----ccEEEEeeCCcc---hHHHHh
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGH--AIYLGPDDIQMGKREETRDAARVLCRY----NDIIMARVFGHQ---DILDLA 71 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~--~~~l~~~~s~~~kgEs~~Dt~~~ls~~----~D~iv~R~~~~~---~~~~~a 71 (261)
+|.+|.......+.+|+.|+.+.... .+.+...++ .+......++....+ +.+|+ =..... ++..++
T Consensus 5 IG~l~~~tg~~~~~a~~lAveeiN~~~~~l~~~~~D~---~~~~~~~a~~~~~~l~~~~V~aii-G~~~S~~~~a~~~i~ 80 (823)
T 3kg2_A 5 IGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDNL---EVANSFAVTNAFCSQFSRGVYAIF-GFYDKKSVNTITSFC 80 (823)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHTCCSSCEEEEEEEEE---CTTCHHHHHHHHHHHHHTTCSEEE-ECCCTTTHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHHHhcCCeEEEEEEEEc---CCCChHHHHHHHHHHHhcCcEEEE-cCCChhHHHHHHHHh
Confidence 47788888889999999999998764 232222111 122223334433333 23332 233322 356777
Q ss_pred hhCCCcEEeCCCC--C-------CChhH--HHHHHHHHHHHhCCCCCcEEEEEcCC---CchHHHHHHHHhcCCcEEEEe
Q 024871 72 KFATVPVINGLTD--Y-------NHPCQ--IMADALTIIEHVGRLEGTKVVYVGDG---NNIVHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 72 ~~~~vPVINa~~~--~-------~HPtQ--~L~Dl~Ti~e~~g~l~~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~ 137 (261)
+..++|.|..... . ..|+| +++++ .+++| .++|+++.|. ...+..+...+...|..+...
T Consensus 81 ~~~~iP~is~~~~~~~~~~~~~r~~p~~~~a~~~l---~~~~g---w~~v~ii~d~~~g~~~~~~~~~~~~~~g~~v~~~ 154 (823)
T 3kg2_A 81 GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSL---IEYYQ---WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAI 154 (823)
T ss_dssp HHTTCEEEECSCCCSSCCSSEEECSCCCHHHHHHH---HHHTT---CSEEEEEECGGGCTHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCCceeecccCCCCCCceEEEeCCCHHHHHHHH---HHHCC---CCEEEEEEeCChhHHHHHHHHHHhhccCCceEEE
Confidence 8889999985211 1 14544 44544 34553 6889988863 346677777788888877644
No 361
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=52.00 E-value=41 Score=29.61 Aligned_cols=69 Identities=10% Similarity=0.120 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHH-HHHHHhCCC-eEEEEcCHHHHhC--CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETV-EKARKAGIS-KIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~-~~~~~~g~~-~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
.+||++||- +++.+.++..+... +++++.++-. +++.. +.+++.|.. ....+.|.++.++ ++|+||.-.
T Consensus 6 ~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~----~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~t 79 (362)
T 1ydw_A 6 QIRIGVMGC-ADIARKVSRAIHLAPNATISGVASR----SLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPL 79 (362)
T ss_dssp CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECS----SHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECC
T ss_pred ceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcC----CHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcC
Confidence 479999996 56666666655554 5777644432 23322 334555531 2456889999986 589999865
No 362
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=51.92 E-value=37 Score=25.92 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=46.7
Q ss_pred cEEEEEcCCCchHHHHH-HHH-h-cC--CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE--EEcCH-HHHhCCCCEEEEe
Q 024871 108 TKVVYVGDGNNIVHSWL-LMA-S-VI--PFHFVCACPKGFEPDKETVEKARKAGISKIE--ITNDP-KEVVQGADVVYSD 179 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~-~~~-~-~~--g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~--~~~d~-~~a~~~aDviy~~ 179 (261)
+||.||.- +|+++|-+ ++. . .. .+.+.-++-.+-.+++..++.+++.|+. +. ....+ ++-++++|+|++-
T Consensus 5 ~~VLFVC~-gN~cRSpmAEa~~~~~~~~~~~v~SAGt~g~~~~~~a~~~l~e~Gid-~s~~~sr~l~~~~~~~~DlIi~m 82 (134)
T 2l17_A 5 KKVMFVCK-RNSCRSQMAEGFAKTLGAGKIAVTSCGLESSRVHPTAIAMMEEVGID-ISGQTSDPIENFNADDYDVVISL 82 (134)
T ss_dssp EEEEEECC-SSTHHHHHHHHHHHHHSBTTEEEEEECCTTSSCCHHHHHHHHTTTCC-CSSCCCCCGGGCCGGGCSEEEEC
T ss_pred CEEEEEeC-CchHHHHHHHHHHHHHcCCCEEEEcccCCCCCCCHHHHHHHHHcCCC-cccCccccCChHHhccCCEEEEe
Confidence 48999984 88999954 332 1 12 3677777777777888888889998842 11 12223 2346789999996
No 363
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=51.62 E-value=59 Score=28.36 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=45.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCC----------eEEEEcCHHHHhCCCCEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGIS----------KIEITNDPKEVVQGADVV 176 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~----------~i~~~~d~~~a~~~aDvi 176 (261)
..||+++|- +++..+++..++.-|.++++...+ +..+.+++.|.. .+..++|+++ ++++|+|
T Consensus 3 ~mkI~IiGa-G~~G~~~a~~L~~~g~~V~~~~r~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 3 LTRICIVGA-GAVGGYLGARLALAGEAINVLARG------ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCCEEEESC-CHHHHHHHHHHHHTTCCEEEECCH------HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEEEEECh------HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 468999995 788888888887778888877642 233445555521 1234568776 6999999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 75 ilav 78 (335)
T 3ghy_A 75 IVAV 78 (335)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8864
No 364
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=51.60 E-value=25 Score=32.62 Aligned_cols=66 Identities=15% Similarity=0.084 Sum_probs=45.1
Q ss_pred HhCCCCCcEEEEEcCC-----Cc----hHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh
Q 024871 101 HVGRLEGTKVVYVGDG-----NN----IVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV 170 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~-----~~----v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~ 170 (261)
.++.++|+||++.|=. .. -+..++..+... |.++.+.-|.--. + ....++++++
T Consensus 309 ~l~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~--~--------------~~~~~~~~~~ 372 (431)
T 3ojo_A 309 IIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVEL--D--------------FVEHDMSHAV 372 (431)
T ss_dssp HHHHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCC--T--------------TBCSTTHHHH
T ss_pred HhhhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCccc--c--------------cccCCHHHHH
Confidence 3456899999999931 12 344466666667 9999988884321 0 1246789999
Q ss_pred CCCCEEEEe-ccc
Q 024871 171 QGADVVYSD-VWA 182 (261)
Q Consensus 171 ~~aDviy~~-~w~ 182 (261)
+++|+|... .|.
T Consensus 373 ~~ad~vvi~t~~~ 385 (431)
T 3ojo_A 373 KDASLVLILSDHS 385 (431)
T ss_dssp TTCSEEEECSCCG
T ss_pred hCCCEEEEecCCH
Confidence 999998765 464
No 365
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=50.96 E-value=21 Score=31.48 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=41.0
Q ss_pred cEEEEEcCCCchHH-HHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCC--CCEEEEec
Q 024871 108 TKVVYVGDGNNIVH-SWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQG--ADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~-S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~--aDviy~~~ 180 (261)
+||++||- +++.. -.+..+... +++++-++-.. ..+. .+++.+...+..+.|+++.+++ .|+||.-.
T Consensus 3 ~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~---~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~t 73 (349)
T 3i23_A 3 VKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLH--VNEK---AAAPFKEKGVNFTADLNELLTDPEIELITICT 73 (349)
T ss_dssp EEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTT--CCHH---HHHHHHTTTCEEESCTHHHHSCTTCCEEEECS
T ss_pred eEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCC--HHHH---HHHhhCCCCCeEECCHHHHhcCCCCCEEEEeC
Confidence 68999997 45554 334444444 67887444333 2332 2344322234678999999986 89988864
No 366
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=50.91 E-value=77 Score=29.57 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=61.6
Q ss_pred CCCcEEeCCCCCCChhHHHHHHHHHHH---HhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC--------CCC
Q 024871 74 ATVPVINGLTDYNHPCQIMADALTIIE---HVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC--------PKG 141 (261)
Q Consensus 74 ~~vPVINa~~~~~HPtQ~L~Dl~Ti~e---~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~--------P~~ 141 (261)
++.|+--|++...-+--+.-=++.+++ ++| +++|++|++.|. +||....++.+...|.+++-++ |+|
T Consensus 198 TGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGf-GnVG~~~a~~L~e~GakvVavsD~~G~i~dp~G 276 (440)
T 3aog_A 198 TGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGF-GNVGNAAARAFHDHGARVVAVQDHTGTVYNEAG 276 (440)
T ss_dssp SSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCEEECTTC
T ss_pred eccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEecc-CHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCC
Confidence 455655555544445555666666544 345 589999999995 8899999988888899887333 555
Q ss_pred CCCCHHHHHHHHHhCC----CeEEEEcCHHHHh-CCCCEEEEec
Q 024871 142 FEPDKETVEKARKAGI----SKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 142 ~~~~~~~~~~~~~~g~----~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
+.++ .+.+..++.|. ...+.. +.++.+ -+|||++.-.
T Consensus 277 ld~~-~l~~~~~~~g~i~~y~~a~~i-~~~ei~~~~~DIlvPcA 318 (440)
T 3aog_A 277 IDPY-DLLRHVQEFGGVRGYPKAEPL-PAADFWGLPVEFLVPAA 318 (440)
T ss_dssp CCHH-HHHHHHHHTSSSTTCTTSEEC-CHHHHTTCCCSEEEECS
T ss_pred CCHH-HHHHHHHhcCCcccCCCceEc-CchhhhcCCCcEEEecC
Confidence 5432 23333333330 001222 334443 3788888753
No 367
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=50.75 E-value=31 Score=31.48 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=31.0
Q ss_pred CChhHHHHHHHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC
Q 024871 86 NHPCQIMADALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG 141 (261)
Q Consensus 86 ~HPtQ~L~Dl~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~ 141 (261)
+--||+=.|+.+.....- -+.|+||+++|. +...+-++..+..+|.+++++.|..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 13 EAQTQGPGSMTATPDSVSPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp ----------------CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred hhhccChhhhccCccccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 334455555533333322 367899999996 5577888899999999998887654
No 368
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=50.37 E-value=7.1 Score=33.06 Aligned_cols=102 Identities=7% Similarity=-0.019 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCCh-
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHP- 88 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HP- 88 (261)
+-...++.++.++|-+++..+... ..+...+..+.+ ++-+|.|++-........+..+..++|||-.+.....+
T Consensus 31 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~ 106 (301)
T 3miz_A 31 DIVRGIQDWANANGKTILIANTGG----SSEREVEIWKMFQSHRIDGVLYVTMYRRIVDPESGDVSIPTVMINCRPQTRE 106 (301)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEEEEEEEEECCCCCTTCCCCEEEEEEECSSTT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC----ChHHHHHHHHHHHhCCCCEEEEecCCccHHHHHHHhCCCCEEEECCCCCCCC
Confidence 566789999999999988775331 122233444443 44589888765443332233456789988754322222
Q ss_pred --hHHHHHHH----HHHHHhCCCCCcEEEEEcCC
Q 024871 89 --CQIMADAL----TIIEHVGRLEGTKVVYVGDG 116 (261)
Q Consensus 89 --tQ~L~Dl~----Ti~e~~g~l~~~~i~~vGd~ 116 (261)
..+..|-+ .+-+++-..-..+|++++..
T Consensus 107 ~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~ 140 (301)
T 3miz_A 107 LLPSIEPDDYQGARDLTRYLLERGHRRIGYIRLN 140 (301)
T ss_dssp SSCEEEECHHHHHHHHHHHHHTTTCCSEEEEECC
T ss_pred CCCEEeeChHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 11222211 12233333334789999864
No 369
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=50.21 E-value=18 Score=32.98 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=43.7
Q ss_pred CCCcEEEEEcCCC--chHHHHHHHHhcCC-cEEEE-eCCCCCCCCHHH-HHHHHHhCCCeEEEEcCHHHHhCC-------
Q 024871 105 LEGTKVVYVGDGN--NIVHSWLLMASVIP-FHFVC-ACPKGFEPDKET-VEKARKAGISKIEITNDPKEVVQG------- 172 (261)
Q Consensus 105 l~~~~i~~vGd~~--~v~~S~~~~~~~~g-~~~~~-~~P~~~~~~~~~-~~~~~~~g~~~i~~~~d~~~a~~~------- 172 (261)
-+.+||++||-+. -+.+..+..+...+ ++++. ++- ++++. .+.+++.|......+.|.++.+++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALS----STPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECC----SSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTC
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeC----CCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCC
Confidence 3568999999754 16556555555554 67763 432 22333 234556664322357899998875
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
.|+|+.-.
T Consensus 111 vD~V~I~t 118 (417)
T 3v5n_A 111 IEAVAIVT 118 (417)
T ss_dssp CSEEEECS
T ss_pred CcEEEECC
Confidence 89988754
No 370
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=50.18 E-value=50 Score=27.21 Aligned_cols=56 Identities=18% Similarity=0.134 Sum_probs=38.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEE-EeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh-CCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFV-CACPKGFEPDKETVEKARKAGISKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~-~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
.||+++|- +++...++..+..-|++++ ++.+.. ... . .++|+++.+ .++|+|+.-.
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~-------------~--~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG-EHE-------------K--MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC-CCT-------------T--EESSHHHHTTSCCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc-chh-------------h--hcCCHHHHhcCCCCEEEECC
Confidence 48999996 7777777666555678874 444432 110 1 477899888 6899998864
No 371
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.14 E-value=41 Score=25.52 Aligned_cols=68 Identities=4% Similarity=0.028 Sum_probs=43.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH---HhCCCeEEEE-----cCHHHH-hCCCCEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR---KAGISKIEIT-----NDPKEV-VQGADVVY 177 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~---~~g~~~i~~~-----~d~~~a-~~~aDviy 177 (261)
+.+|.++|- +++...++..+...|.+++++.+.. ++..+.++ ..|. .+..- +.++++ ++++|+|+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNA-DVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTC-EEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCC-eEEEcCCCCHHHHHHcChhhCCEEE
Confidence 568999995 8899999988888899888887631 12112222 2232 22211 123444 89999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 77 ~~~ 79 (153)
T 1id1_A 77 ALS 79 (153)
T ss_dssp ECS
T ss_pred Eec
Confidence 874
No 372
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=49.89 E-value=19 Score=32.31 Aligned_cols=67 Identities=19% Similarity=0.194 Sum_probs=43.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhCC--CCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQG--ADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~~--aDviy~~~ 180 (261)
.+||++||-+.++....+..+... +++++-++- ++++.. +.++++|. ..+.|.++.+++ .|+|+.-.
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d----~~~~~~~~~a~~~g~---~~~~~~~ell~~~~vD~V~i~t 72 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD----PNEDVRERFGKEYGI---PVFATLAEMMQHVQMDAVYIAS 72 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC----SCHHHHHHHHHHHTC---CEESSHHHHHHHSCCSEEEECS
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe----CCHHHHHHHHHHcCC---CeECCHHHHHcCCCCCEEEEcC
Confidence 479999998656665555555454 577775542 233333 33456664 357899999874 89998864
No 373
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=49.79 E-value=55 Score=28.26 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=42.4
Q ss_pred HhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 101 HVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 101 ~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
..|.++.-+..+.+-.+|...+++..++.+|++.+++-|++. ++.-++.++..| +.+..++
T Consensus 58 ~~g~~~~g~~vv~assGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~k~~~~~~~G-A~v~~~~ 118 (308)
T 2egu_A 58 KAGKLKPGDTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTM--SLERRNLLRAYG-AELVLTP 118 (308)
T ss_dssp HTTCCCTTCEEEEECCHHHHHHHHHHHHHHTCEEEEEEESCS--CHHHHHHHHHTT-CEEEEEC
T ss_pred HcCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCC--CHHHHHHHHHcC-CEEEEEC
Confidence 345443212333455589999999999999999999889773 455556677888 5777665
No 374
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=49.64 E-value=23 Score=31.05 Aligned_cols=65 Identities=23% Similarity=0.193 Sum_probs=41.7
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCCCCCCCCHHHHHHHH---HhC-----CCeEEEEcCHHHHhCCCCEEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACPKGFEPDKETVEKAR---KAG-----ISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~---~~g-----~~~i~~~~d~~~a~~~aDviy 177 (261)
.||+++|- +++..+++..+..-|. ++++.... ++.++... ..+ ...+.. .| .+++++||+|+
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~-----~~~~~~~~~~l~~~~~~~~~~~i~~-~d-~~~~~~aDvVi 72 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVD-----KKRAEGDALDLIHGTPFTRRANIYA-GD-YADLKGSDVVI 72 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC-----hHHHHHHHHHHHhhhhhcCCcEEEe-CC-HHHhCCCCEEE
Confidence 48999996 8888888877766676 88877543 23222211 111 124544 46 56899999998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 73 iav 75 (319)
T 1a5z_A 73 VAA 75 (319)
T ss_dssp ECC
T ss_pred Ecc
Confidence 864
No 375
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=49.31 E-value=28 Score=30.49 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=40.5
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc--EEEEeCC-CCCC-CCHHHHHHHHH---hC-CCeEEEEc-CHHHHhCCCCEEEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF--HFVCACP-KGFE-PDKETVEKARK---AG-ISKIEITN-DPKEVVQGADVVYS 178 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~--~~~~~~P-~~~~-~~~~~~~~~~~---~g-~~~i~~~~-d~~~a~~~aDviy~ 178 (261)
.||+++|..+.+..+++..+..-|. ++.+.-. +.-. ......+.... .| ...+.-.+ ++.++++++|+|+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 3899999878888888776655453 4555432 1100 01111111111 11 11343333 36889999999998
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 81 ~A 82 (313)
T 1hye_A 81 TS 82 (313)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 376
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=49.14 E-value=30 Score=29.97 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=31.9
Q ss_pred hCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 102 VGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 102 ~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.+.++|+++.+.|....+...++..+..-|.+++++.
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVND 58 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3568999999999888899999998888899998875
No 377
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=49.12 E-value=1e+02 Score=26.84 Aligned_cols=70 Identities=14% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-EcCHHHHh-----CCCCEEEEe
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-TNDPKEVV-----QGADVVYSD 179 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~~d~~~a~-----~~aDviy~~ 179 (261)
.|.+|++.|..+.+....+.++...|.+++.++.. ++-++.+++.|...+.- .++..+.+ +++|+++-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR-----NETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS-----HHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEEC
Confidence 58999999877889999999999999998877642 44567788888432221 12333333 257888765
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 225 ~ 225 (346)
T 3fbg_A 225 F 225 (346)
T ss_dssp S
T ss_pred C
Confidence 3
No 378
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=49.07 E-value=1.3e+02 Score=25.77 Aligned_cols=129 Identities=12% Similarity=0.173 Sum_probs=73.6
Q ss_pred CEeeccCCChhhHHHHHHHHHhc-------CCeEEEeCCCCcCCCCCCCHHHHHHHHhhh----ccEEEEeeCCc---ch
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLL-------GGHAIYLGPDDIQMGKREETRDAARVLCRY----NDIIMARVFGH---QD 66 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~L-------Gg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~----~D~iv~R~~~~---~~ 66 (261)
++-||...+..-..+|+.|+... |-++ .|.........+++ ...++.+..+ +.+|+= ...+ ..
T Consensus 8 IG~lf~~~~~~~~~a~~~Av~~iN~~~~ilg~~~-~l~~~~~~~~~~~~-~~~~~~~~~l~~~~V~aiiG-~~~S~~~~~ 84 (389)
T 4gpa_A 8 IGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPF-NLVPHVDNIETANS-FAVTNAFCSQYSRGVFAIFG-LYDKRSVHT 84 (389)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHTCSCTTTCSS-EEEEEEEECSSCCH-HHHHHHHHHHHHTTCSEEEE-CCCTTTHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHHHHhCCCCCCCCE-EEEEEEecCCCchH-HHHHHHHHHHHhcCCEEEEe-CCccHHHHH
Confidence 46789888888888999998764 2221 11111111112332 2333433332 333332 2322 23
Q ss_pred HHHHhhhCCCcEEeCC---CCC--------CChhHHHHHHHHHHHHhCCCCCcEEEEEcCC---CchHHHHHHHHhcCCc
Q 024871 67 ILDLAKFATVPVINGL---TDY--------NHPCQIMADALTIIEHVGRLEGTKVVYVGDG---NNIVHSWLLMASVIPF 132 (261)
Q Consensus 67 ~~~~a~~~~vPVINa~---~~~--------~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~---~~v~~S~~~~~~~~g~ 132 (261)
+..+++..+||.|... ++. ..|.++++|++ ++|| ..+|+++-|. ......+...+...|.
T Consensus 85 v~~i~~~~~ip~is~~~~~~~~~~~~~~~~~~~~~a~~~l~---~~~~---w~~vaii~~~d~~~~~~~~~~~~~~~~g~ 158 (389)
T 4gpa_A 85 LTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLL---DHYE---WNCFVFLYDTDRGYSILQAIMEKAGQNGW 158 (389)
T ss_dssp HHHHHHHTTCEEEECSCCCSSCCSSEEECSCCCHHHHHHHH---HHTT---CCEEEEEECSTTCSHHHHHHHHHHHTTTC
T ss_pred HHHHHHHhCCCceeccccccccccCCccccCCHHHHHHHHH---HHcC---CcEEEEEEecchhhHHHHHHHHHHHhcCc
Confidence 5677788899999842 111 25778888864 4544 6788888653 2355667777777887
Q ss_pred EEEEeC
Q 024871 133 HFVCAC 138 (261)
Q Consensus 133 ~~~~~~ 138 (261)
.+....
T Consensus 159 ~v~~~~ 164 (389)
T 4gpa_A 159 HVSAIC 164 (389)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 766543
No 379
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=49.01 E-value=60 Score=28.91 Aligned_cols=111 Identities=10% Similarity=0.074 Sum_probs=58.1
Q ss_pred hHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHH-HHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCC-----
Q 024871 12 TRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAAR-VLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDY----- 85 (261)
Q Consensus 12 TR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~-~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~----- 85 (261)
-.-.++.++..+|-+++...... .+ +.++ .+++-+|.|++. .......+..+..++|||..+...
T Consensus 42 l~~gi~~~a~~~g~~~~i~~~~~-----~~---~~i~~l~~~~vDGiIi~-~~~~~~~~~l~~~~iPvV~i~~~~~~~~~ 112 (412)
T 4fe7_A 42 VVEGVGEYLQASQSEWDIFIEED-----FR---ARIDKIKDWLGDGVIAD-FDDKQIEQALADVDVPIVGVGGSYHLAES 112 (412)
T ss_dssp HHHHHHHHHHHHTCCEEEEECC------CC-----------CCCSEEEEE-TTCHHHHHHHTTCCSCEEEEEECCSSGGG
T ss_pred HHHHHHHHHHhcCCCeEEEecCC-----cc---chhhhHhcCCCCEEEEe-cCChHHHHHHhhCCCCEEEecCCcccccc
Confidence 45578889999999987765321 11 1123 334568999983 444444455567799988754321
Q ss_pred --CCh------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHH----HHHHHHhcCCcEE
Q 024871 86 --NHP------CQIMADALTIIEHVGRLEGTKVVYVGDGNN----IVH----SWLLMASVIPFHF 134 (261)
Q Consensus 86 --~HP------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~----S~~~~~~~~g~~~ 134 (261)
..| .++--.+....-..| ..+|++++.... ... .+..++...|...
T Consensus 113 ~~~~~~V~~D~~~~g~~a~~~L~~~G---~r~I~~i~~~~~~~~~~~~~R~~Gf~~al~~~g~~~ 174 (412)
T 4fe7_A 113 YPPVHYIATDNYALVESAFLHLKEKG---VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRG 174 (412)
T ss_dssp SCSSEEEEECHHHHHHHHHHHHHHTT---CCEEEEECCCTTSCCHHHHHHHHHHHHHHTTSSSCC
T ss_pred CCCCCEEEeCHHHHHHHHHHHHHHcC---CceEEEecccccccccHHHHHHHHHHHHHHHcCCCc
Confidence 111 233322222222223 479999986421 122 2445566666543
No 380
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=48.84 E-value=31 Score=30.13 Aligned_cols=71 Identities=17% Similarity=0.237 Sum_probs=46.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh------CCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV------QGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~------~~aDvi 176 (261)
-.|.+|++.|..+.+....+.++...|.+++.+....- -++.+++.|...+.-. .+..+.+ +++|++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvv 217 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK-----HTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAA 217 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST-----THHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEE
Confidence 46799999998778999999888888998877664332 2456677774322211 2333332 268888
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-..
T Consensus 218 id~~ 221 (340)
T 3gms_A 218 IDSI 221 (340)
T ss_dssp EESS
T ss_pred EECC
Confidence 7653
No 381
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=48.70 E-value=38 Score=28.49 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=44.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCC-CHHHHH---HHHHhCCCeEEE-----EcCHHHHhCCCCEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEP-DKETVE---KARKAGISKIEI-----TNDPKEVVQGADVVY 177 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~-~~~~~~---~~~~~g~~~i~~-----~~d~~~a~~~aDviy 177 (261)
.++|++.|..+.+..+++..+..-|.+++...-+.-.. .++..+ .....|. .+.. .+++.++++++|+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v-~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCC-EEEEeccCCHHHHHHHHcCCCEEE
Confidence 47899999888899998888777787776654322111 122211 1222332 2211 123567889999999
Q ss_pred Eecc
Q 024871 178 SDVW 181 (261)
Q Consensus 178 ~~~w 181 (261)
....
T Consensus 83 ~~a~ 86 (308)
T 1qyc_A 83 STVG 86 (308)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8753
No 382
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=48.67 E-value=1.3e+02 Score=26.00 Aligned_cols=127 Identities=14% Similarity=0.183 Sum_probs=73.7
Q ss_pred CEeeccCCChhhHHHHHHHHHhcCCe--EEEeCCCCcCCCCCCCHHHHHHHHh----hhccEEEEeeCCcc---hHHHHh
Q 024871 1 MSMIFAKPSMRTRVSFETGFSLLGGH--AIYLGPDDIQMGKREETRDAARVLC----RYNDIIMARVFGHQ---DILDLA 71 (261)
Q Consensus 1 l~~lF~~~StRTR~SFe~A~~~LGg~--~~~l~~~~s~~~kgEs~~Dt~~~ls----~~~D~iv~R~~~~~---~~~~~a 71 (261)
++.+|...+.-.+..|+.|+.+.... .+.+....+ ........++... .-+++|+= +..+. .+..++
T Consensus 5 IG~i~~~sg~~~~~~~~lAv~~iN~~g~~l~~~~~d~---~~~d~~~a~~~~~~li~~~V~aiiG-~~~S~~~~av~~~~ 80 (376)
T 3hsy_A 5 IGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDNL---EVANSFAVTNAFCSQFSRGVYAIFG-FYDKKSVNTITSFC 80 (376)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHTCCSSCEEEEEEEEE---CTTCHHHHHHHHHHHHHTTCSEEEE-CCCTTTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHhcCCeEEEEEEeec---CCCChHHHHHHHHHHHhcCcEEEEC-CCchhHHHHHHHHh
Confidence 57899999889999999999998763 222211111 1112233333333 32344333 33332 356777
Q ss_pred hhCCCcEEeCCC--CCC-------Chh--HHHHHHHHHHHHhCCCCCcEEEEEcCC---CchHHHHHHHHhcCCcEEEEe
Q 024871 72 KFATVPVINGLT--DYN-------HPC--QIMADALTIIEHVGRLEGTKVVYVGDG---NNIVHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 72 ~~~~vPVINa~~--~~~-------HPt--Q~L~Dl~Ti~e~~g~l~~~~i~~vGd~---~~v~~S~~~~~~~~g~~~~~~ 137 (261)
+..++|+|.... ... .|. +++++++ +++| .++|+++.|. ......+...+...|.+++..
T Consensus 81 ~~~~ip~is~~~~~~~~~~~~~~~~p~~~~a~~~~~---~~~g---w~~vaii~d~~~g~~~~~~~~~~~~~~g~~v~~~ 154 (376)
T 3hsy_A 81 GTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLI---EYYQ---WDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAI 154 (376)
T ss_dssp HHHTCEEEECSCCCCSCCTTEEECSCCCHHHHHHHH---HHTT---CCEEEEEECSTTCSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCcCceeecCCCCcccCCceEEeCccHHHHHHHHH---HhcC---CCEEEEEEeCchhHHHHHHHHHHhhhcCCeEEEE
Confidence 888999997321 111 233 4566653 4443 6889998863 236666777777778777643
No 383
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=48.66 E-value=1.2e+02 Score=25.24 Aligned_cols=118 Identities=8% Similarity=0.088 Sum_probs=65.2
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHh-hhccEEEEeeCC-cchHHHHhhhCCCcEEeCCCCCCCh
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLC-RYNDIIMARVFG-HQDILDLAKFATVPVINGLTDYNHP 88 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls-~~~D~iv~R~~~-~~~~~~~a~~~~vPVINa~~~~~HP 88 (261)
+-...++.++...|-+++...... ..+...+..+.+. +-+|.|++-... .....+..+..++|||-.+.....+
T Consensus 29 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~~~iPvV~i~~~~~~~ 104 (295)
T 3hcw_A 29 NVLLGISETCNQHGYGTQTTVSNN----MNDLMDEVYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDI 104 (295)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCCS----HHHHHHHHHHHHHTTCCSEEEESCCCTTCHHHHHHHHTTCCEEEESCCCSSG
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC----ChHHHHHHHHHHHhCCcCEEEEcCcccChHHHHHHHhCCCCEEEECCCCccc
Confidence 345568889999999988765431 1222334455444 458988885432 2334444566789988755433322
Q ss_pred -----------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCc--h----HHHHHHHHhcCCcEEE
Q 024871 89 -----------CQIMADALTIIEHVGRLEGTKVVYVGDGNN--I----VHSWLLMASVIPFHFV 135 (261)
Q Consensus 89 -----------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~--v----~~S~~~~~~~~g~~~~ 135 (261)
.++--.+....-..| ..+|++++.... . ...+...+...|..+.
T Consensus 105 ~~~~~~V~~D~~~~~~~a~~~L~~~G---~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~ 165 (295)
T 3hcw_A 105 DHQFTHIDNDNILASENLTRHVIEQG---VDELIFITEKGNFEVSKDRIQGFETVASQFNLDYQ 165 (295)
T ss_dssp GGGSCEEEECHHHHHHHHHHHHHHHC---CSEEEEEEESSCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCceEEecCcHHHHHHHHHHHHHcC---CccEEEEcCCccchhHHHHHHHHHHHHHHcCCCee
Confidence 122222222222233 479999985422 2 2234455666777654
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.60 E-value=36 Score=25.54 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=45.4
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcC------HHH-HhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITND------PKE-VVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d------~~~-a~~~aDviy~~~ 180 (261)
.+|+++|- +++..+++..+...|.+++++.. +++..+.+++.|. .+. .-| +++ .++++|+++...
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~-----~~~~~~~~~~~g~-~~i-~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIET-----SRTRVDELRERGV-RAV-LGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEES-----CHHHHHHHHHTTC-EEE-ESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEEC-----CHHHHHHHHHcCC-CEE-ECCCCCHHHHHhcCcccCCEEEEEC
Confidence 57999995 88999999988888998887754 3555666677663 332 222 122 367999988753
No 385
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=48.55 E-value=1.2e+02 Score=25.50 Aligned_cols=167 Identities=10% Similarity=-0.004 Sum_probs=93.7
Q ss_pred eccCC--ChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHH-------Hhhh
Q 024871 4 IFAKP--SMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILD-------LAKF 73 (261)
Q Consensus 4 lF~~~--StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~-------~a~~ 73 (261)
+|-+| -++...=+..++.++|....+..-. + ..|.+.+.++.+... .+.+.+=.+-...+.. .|+.
T Consensus 6 viG~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~---~-~~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~ld~~~~~A~~ 81 (271)
T 1nyt_A 6 VFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVL---A-PINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL 81 (271)
T ss_dssp EEESSCTTCSHHHHHHHHHHHHTCCCCEEEEE---C-CTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred EECCCcccccCHHHHHHHHHHCCCCcEEEEEE---c-CHHHHHHHHHHHHhCCCCeEEEccCCHHHHHHHHhhcCHHHHH
Confidence 44444 3556666888999999876554322 1 247788888877643 4666665554333322 2222
Q ss_pred --CCCcEEe-CCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHH
Q 024871 74 --ATVPVIN-GLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETV 149 (261)
Q Consensus 74 --~~vPVIN-a~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~ 149 (261)
+-=+|++ -+| -..+-|-...=+..+.+....++|++++++|- +.+..+.+..+...|.+++++.-.. +...
T Consensus 82 igavNti~~~~~g~l~G~ntD~~G~~~~L~~~~~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~----~~~~ 156 (271)
T 1nyt_A 82 AGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV----SRAE 156 (271)
T ss_dssp HTCCSEEEECTTSCEEEECCHHHHHHHHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH----HHHH
T ss_pred hCCceEEEEcCCCeEEEeCCCHHHHHHHHHhcCcCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH----HHHH
Confidence 1224554 222 11222322222222334323689999999997 5799999988888898888775321 1111
Q ss_pred HHHHHhCC-CeEEEEcCHHHHh-CCCCEEEEec
Q 024871 150 EKARKAGI-SKIEITNDPKEVV-QGADVVYSDV 180 (261)
Q Consensus 150 ~~~~~~g~-~~i~~~~d~~~a~-~~aDviy~~~ 180 (261)
+.+++.+. ..+.. .+.++.. .++|+|+...
T Consensus 157 ~la~~~~~~~~~~~-~~~~~~~~~~~DivVn~t 188 (271)
T 1nyt_A 157 ELAKLFAHTGSIQA-LSMDELEGHEFDLIINAT 188 (271)
T ss_dssp HHHHHTGGGSSEEE-CCSGGGTTCCCSEEEECC
T ss_pred HHHHHhhccCCeeE-ecHHHhccCCCCEEEECC
Confidence 22333321 12333 3444333 5899999875
No 386
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=48.51 E-value=49 Score=28.83 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=42.8
Q ss_pred cEEEEEcCCCchHHHH-HHHHhcC-CcEEEEeCCCCCCCCHHH-HHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEecc
Q 024871 108 TKVVYVGDGNNIVHSW-LLMASVI-PFHFVCACPKGFEPDKET-VEKARKAGISKIEITNDPKEVVQ--GADVVYSDVW 181 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~-~~~~~~~-g~~~~~~~P~~~~~~~~~-~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~w 181 (261)
+||++||- +++.+.. +.+.... +++++-+|- ++++. .+.++++|+. ..++|.++.++ +.|+||.-+.
T Consensus 24 irigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d----~~~~~a~~~a~~~g~~--~~y~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 24 LRFGIIST-AKIGRDNVVPAIQDAENCVVTAIAS----RDLTRAREMADRFSVP--HAFGSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp EEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEEC----SSHHHHHHHHHHHTCS--EEESSHHHHHHCSSCSEEEECSC
T ss_pred cEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEEC----CCHHHHHHHHHHcCCC--eeeCCHHHHhcCCCCCEEEEeCC
Confidence 79999996 4555443 4444444 678875543 22333 3346677754 45889999885 5799988653
No 387
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=48.51 E-value=65 Score=30.03 Aligned_cols=64 Identities=11% Similarity=0.078 Sum_probs=48.4
Q ss_pred HHHHHHHHhC---CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 94 DALTIIEHVG---RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 94 Dl~Ti~e~~g---~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
=|+.++|+|+ .|+|.||+.+=-..--..-+++.+...|.++..++-+-|...+++...+.+.|+
T Consensus 38 ~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi 104 (435)
T 3gvp_A 38 ALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGF 104 (435)
T ss_dssp HHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCCCcChHHHHHHHHhcCC
Confidence 4778888886 399999887665544444577888889999998887778888887766666674
No 388
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=48.25 E-value=42 Score=31.97 Aligned_cols=64 Identities=11% Similarity=-0.020 Sum_probs=46.0
Q ss_pred CCCcEEeCCCCCCChhHHHHHHHHHHH---------HhC---CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 74 ATVPVINGLTDYNHPCQIMADALTIIE---------HVG---RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 74 ~~vPVINa~~~~~HPtQ~L~Dl~Ti~e---------~~g---~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
++.|+--|++...-+--+.-=++.+++ .+| +|+|++|++-|. +||....++.+...|.+++.++
T Consensus 199 TGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~-GNVG~~aa~~L~e~GakVVavs 274 (501)
T 3mw9_A 199 TGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGF-GNVGLHSMRYLHRFGAKCITVG 274 (501)
T ss_dssp SSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred eCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 345665555544445556666666654 456 489999999995 8999999988888999988654
No 389
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=48.18 E-value=46 Score=27.99 Aligned_cols=74 Identities=15% Similarity=0.134 Sum_probs=44.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHH---HHhCCCeEEE-----EcCHHHHhCCCCEEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKA---RKAGISKIEI-----TNDPKEVVQGADVVYS 178 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~---~~~g~~~i~~-----~~d~~~a~~~aDviy~ 178 (261)
.++|++.|..+.+...++..+..-|.+++..+-+.-...++..+.+ ...|. .+.. .+++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 4689999988888888888777778877766532211112221111 22232 1211 1235678999999998
Q ss_pred ecc
Q 024871 179 DVW 181 (261)
Q Consensus 179 ~~w 181 (261)
...
T Consensus 83 ~a~ 85 (313)
T 1qyd_A 83 ALA 85 (313)
T ss_dssp CCC
T ss_pred CCc
Confidence 653
No 390
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=48.14 E-value=18 Score=32.36 Aligned_cols=26 Identities=38% Similarity=0.836 Sum_probs=20.3
Q ss_pred eEEEEcCHHHHhCCCCEEEEecccCcch
Q 024871 159 KIEITNDPKEVVQGADVVYSDVWASMGQ 186 (261)
Q Consensus 159 ~i~~~~d~~~a~~~aDviy~~~w~~~~~ 186 (261)
.+++++|-.||++++|++++ |-..|.
T Consensus 128 GVkVtsDD~EAvk~AEi~Il--ftPfG~ 153 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVIT--WLPKGN 153 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEE--CCTTCT
T ss_pred CcEeecchHHHhcCCCEEEE--ecCCCC
Confidence 36778888999999999987 445554
No 391
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=48.13 E-value=31 Score=30.52 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=45.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh----CCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV----QGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~----~~aDviy~~~ 180 (261)
|.+|++.|. +.+.+..+.++..+|.+++.+....- +++-.+.+++.|...+ -.++..+.+ .++|+|+-..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~~~~ga~~v-~~~~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREP--TEVEQTVIEETKTNYY-NSSNGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCC--CHHHHHHHHHHTCEEE-ECTTCSHHHHHHHCCEEEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCcc--chHHHHHHHHhCCcee-chHHHHHHHHHhCCCCCEEEECC
Confidence 999999998 88999999998888998877654320 2234466777774322 111222222 4688888654
No 392
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=48.12 E-value=17 Score=32.78 Aligned_cols=72 Identities=17% Similarity=0.058 Sum_probs=43.3
Q ss_pred CCCcEEEEEcCCC--chHHHHHHHHhcCC-cEEEE-eCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhCC-------
Q 024871 105 LEGTKVVYVGDGN--NIVHSWLLMASVIP-FHFVC-ACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQG------- 172 (261)
Q Consensus 105 l~~~~i~~vGd~~--~v~~S~~~~~~~~g-~~~~~-~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~~------- 172 (261)
.+.+||++||-+. .+.+..+..+...+ ++++. ++- ++++.. +.+++.|......+.|.++.+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFD----IDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECC----SSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeC----CCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCC
Confidence 3568999999653 15555555444444 67764 332 233333 34556664322457899998864
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
.|+|+.-.
T Consensus 86 vD~V~i~t 93 (398)
T 3dty_A 86 IQAVSIAT 93 (398)
T ss_dssp CSEEEEES
T ss_pred CCEEEECC
Confidence 99988754
No 393
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=48.10 E-value=89 Score=27.15 Aligned_cols=55 Identities=16% Similarity=0.039 Sum_probs=41.6
Q ss_pred cEEEEEc-CCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 108 TKVVYVG-DGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 108 ~~i~~vG-d~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
.+|+-.| -.+|...+++..++.+|++.+++-|+... ++.-++.++.+| +.+..++
T Consensus 71 ~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~-~~~k~~~~~~~G-A~v~~~~ 126 (325)
T 1j0a_A 71 DVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEE-LKGNYLLDKIMG-IETRVYD 126 (325)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCCC-SCHHHHHHHHTT-CEEEEES
T ss_pred CEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCCC-CCchHHHHHHCC-CEEEEeC
Confidence 4666665 45899999999999999999998887652 334456677888 5677654
No 394
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=48.08 E-value=16 Score=32.64 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=43.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCc-------EEEEeCCCC-C-CCCHHHHHHHHHhC---CCeEEEEcCHHHHhCCCCE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPF-------HFVCACPKG-F-EPDKETVEKARKAG---ISKIEITNDPKEVVQGADV 175 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~-------~~~~~~P~~-~-~~~~~~~~~~~~~g---~~~i~~~~d~~~a~~~aDv 175 (261)
+||+++|-.++|..+++..+..-+. .++++--+. . ......++. .... ...+..+.+..+++++||+
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL-~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL-QDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH-HHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhh-HhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 6899999878898888877655432 266553221 0 001111221 1211 1246677888999999999
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
|+...
T Consensus 83 VvitA 87 (333)
T 5mdh_A 83 AILVG 87 (333)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 88863
No 395
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=47.95 E-value=31 Score=31.00 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=41.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC---------CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CC
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI---------PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GA 173 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~---------g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~a 173 (261)
+.+||++||- +++.+..+...... +.+++-+|- ++++.. +.++++|.. ..++|.++.++ +.
T Consensus 25 ~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d----~~~~~a~~~a~~~~~~--~~y~d~~~ll~~~~v 97 (412)
T 4gqa_A 25 ARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALAD----QDQAMAERHAAKLGAE--KAYGDWRELVNDPQV 97 (412)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC----SSHHHHHHHHHHHTCS--EEESSHHHHHHCTTC
T ss_pred ccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEc----CCHHHHHHHHHHcCCC--eEECCHHHHhcCCCC
Confidence 3489999996 45554444433221 456665542 333433 345667754 45889999986 57
Q ss_pred CEEEEec
Q 024871 174 DVVYSDV 180 (261)
Q Consensus 174 Dviy~~~ 180 (261)
|+||.-+
T Consensus 98 D~V~I~t 104 (412)
T 4gqa_A 98 DVVDITS 104 (412)
T ss_dssp CEEEECS
T ss_pred CEEEECC
Confidence 8887743
No 396
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=47.71 E-value=1.3e+02 Score=25.60 Aligned_cols=118 Identities=16% Similarity=0.109 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHhcC----CeEEEeCCCCcCCCCCCCHHHHHHHHhh-----hccEEEEeeCC--cchHHHHhhhCCCcEE
Q 024871 11 RTRVSFETGFSLLG----GHAIYLGPDDIQMGKREETRDAARVLCR-----YNDIIMARVFG--HQDILDLAKFATVPVI 79 (261)
Q Consensus 11 RTR~SFe~A~~~LG----g~~~~l~~~~s~~~kgEs~~Dt~~~ls~-----~~D~iv~R~~~--~~~~~~~a~~~~vPVI 79 (261)
..+..++.|+.+.| |..+.+-..+ .+.+.......+.. -+|+|+.=..+ ...+...++..++|+|
T Consensus 35 ~~~~g~~~a~~~~ng~~~g~~~~l~~~d----~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v 110 (375)
T 4evq_A 35 AITRGLELYVQSQGGKLGGRSISFVKVD----DESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTI 110 (375)
T ss_dssp HHHHHHHHHHHHTTTEETTEEEEEEEEE----CTTCHHHHHHHHHCCCCCSCCSEEEECSSHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHHhCCCcCCEEEEEEEec----CCCCHHHHHHHHHHHHhcCCceEEEcCCccHHHHHHHHHHHHcCceEE
Confidence 45678999999998 3333321111 12233344444433 35666652221 1234456667799999
Q ss_pred eCCC-C------CCCh---------hHHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHHHHHHHHhcCCcEEE
Q 024871 80 NGLT-D------YNHP---------CQIMADALTIIEHVGRLEGTKVVYVGDGNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 80 Na~~-~------~~HP---------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~S~~~~~~~~g~~~~ 135 (261)
...+ . ..+| .+.-..+......+ ..+||+++++... ....+...+...|.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~ia~i~~~~~~~~~~~~~~~~~l~~~G~~v~ 183 (375)
T 4evq_A 111 VPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKA---GLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVV 183 (375)
T ss_dssp ESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHT---TCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHc---CCcEEEEEecCchHHHHHHHHHHHHHHHcCCeEE
Confidence 7431 0 0122 22222233333333 3689999986433 33445556667787654
No 397
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=47.63 E-value=19 Score=29.92 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=30.0
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.++|+++.+.|..+.+...++..+..-|.++++..
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~ 52 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNY 52 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 47899999999888899999988888899887764
No 398
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=47.61 E-value=71 Score=30.05 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=48.0
Q ss_pred CCCcEEEEEcCCCchHHH-HHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHS-WLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S-~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
+.+++|.++|= +.+..| ++.++...|.+|...--+...+ ..+.+++.|+ .+..-++.+....++|+|+..+
T Consensus 17 ~~~~~i~~iGi-Gg~Gms~lA~~l~~~G~~V~~sD~~~~~~---~~~~L~~~gi-~~~~G~~~~~~~~~~d~vV~Sp 88 (524)
T 3hn7_A 17 FQGMHIHILGI-CGTFMGSLALLARALGHTVTGSDANIYPP---MSTQLEQAGV-TIEEGYLIAHLQPAPDLVVVGN 88 (524)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCCTT---HHHHHHHTTC-EEEESCCGGGGCSCCSEEEECT
T ss_pred ecCCEEEEEEe-cHhhHHHHHHHHHhCCCEEEEECCCCCcH---HHHHHHHCCC-EEECCCCHHHcCCCCCEEEECC
Confidence 77899999994 556666 6888888999988764433322 3455667774 5666667666557899887754
No 399
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=47.60 E-value=14 Score=31.34 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=28.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKG 141 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~ 141 (261)
+|++.+|+++|- +.+....+..++..|+ +++++-+..
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 467899999995 5677777777777786 888887765
No 400
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=47.49 E-value=58 Score=28.76 Aligned_cols=38 Identities=29% Similarity=0.305 Sum_probs=33.0
Q ss_pred hCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 102 VGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 102 ~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
.++++|+++.+.|-...+...++..++.-|.++++++-
T Consensus 40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAK 77 (346)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEEC
Confidence 35699999999999888999999998888999888764
No 401
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=47.40 E-value=1.2e+02 Score=26.77 Aligned_cols=76 Identities=18% Similarity=0.196 Sum_probs=50.4
Q ss_pred HHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEE--EcCHHHHhC----
Q 024871 99 IEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEI--TNDPKEVVQ---- 171 (261)
Q Consensus 99 ~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~--~~d~~~a~~---- 171 (261)
.+..+--.|.+|++.|. +.+....+.++..+|. .++.+.. .++-.+.+++.|...+.- .+|..+.++
T Consensus 175 l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~-----~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTR-----QATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-----CHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTS
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-----CHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhh
Confidence 34434456899999996 7899999999999998 7776644 245566788888533321 234444443
Q ss_pred ----CCCEEEEec
Q 024871 172 ----GADVVYSDV 180 (261)
Q Consensus 172 ----~aDviy~~~ 180 (261)
++|+++-..
T Consensus 249 ~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 249 LVPGGVDVVIECA 261 (370)
T ss_dssp SSTTCEEEEEECS
T ss_pred ccCCCCCEEEECC
Confidence 478888653
No 402
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=47.14 E-value=1.3e+02 Score=25.48 Aligned_cols=119 Identities=13% Similarity=-0.043 Sum_probs=62.0
Q ss_pred hhHHHHHHHHHhcCC-------eEEEeCCCCcCCCCCCCHHHHHHHHh-hhccEEEEeeCC--cchHHHHhhhCCCcEEe
Q 024871 11 RTRVSFETGFSLLGG-------HAIYLGPDDIQMGKREETRDAARVLC-RYNDIIMARVFG--HQDILDLAKFATVPVIN 80 (261)
Q Consensus 11 RTR~SFe~A~~~LGg-------~~~~l~~~~s~~~kgEs~~Dt~~~ls-~~~D~iv~R~~~--~~~~~~~a~~~~vPVIN 80 (261)
..+-.++.|+...|+ .++..+.+.. ..+..+-.-+.++ .-+|+|+-=..+ ...+..+++..++|+|.
T Consensus 25 ~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~~---~~~~~~~~~~li~~~~v~~iiG~~~s~~~~~~~~~~~~~~ip~i~ 101 (368)
T 4eyg_A 25 QIDNAIKLYIKKHGDTVAGKKIEVILKDDAAI---PDNTKRLAQELIVNDKVNVIAGFGITPAALAAAPLATQAKVPEIV 101 (368)
T ss_dssp HHHHHHHHHHHHHCSEETTEEEEEEEEECTTC---HHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHcCCCCCCeEEEEEEeCCCCC---HHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHHHhCCceEEe
Confidence 456789999999887 4444443211 0111111222333 346777632111 12344666778999998
Q ss_pred CCC-CC-------------CChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHHHHHHHHhcCCcEEE
Q 024871 81 GLT-DY-------------NHPCQIMADALTIIEHVGRLEGTKVVYVGDGNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 81 a~~-~~-------------~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~S~~~~~~~~g~~~~ 135 (261)
... .. ..+.|.-..+..+...+ ..+||+++++... ....+...+...|.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~ 171 (368)
T 4eyg_A 102 MAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKN---GIKKVATLTSDYAPGNDALAFFKERFTAGGGEIV 171 (368)
T ss_dssp SSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHT---TCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHc---CCCEEEEEecCchHhHHHHHHHHHHHHHcCCEEE
Confidence 532 11 12233333333333343 3689999985432 34445556667787654
No 403
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=46.94 E-value=43 Score=28.90 Aligned_cols=66 Identities=20% Similarity=0.279 Sum_probs=40.9
Q ss_pred cEEEEEcCCCchHHHH-HHHHhcCCcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSW-LLMASVIPFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~-~~~~~~~g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
+||++||- +++.+.. +..+..-+.+++.++- .+++.. +.+++.|.. ..++|.++.++ ++|+|+...
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d----~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~D~V~i~t 70 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRATGGEVVSMMS----TSAERGAAYATENGIG--KSVTSVEELVGDPDVDAVYVST 70 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHHTTCEEEEEEC----SCHHHHHHHHHHTTCS--CCBSCHHHHHTCTTCCEEEECS
T ss_pred CeEEEEcc-cHHHHHhhhHHhhcCCCeEEEEEC----CCHHHHHHHHHHcCCC--cccCCHHHHhcCCCCCEEEEeC
Confidence 48999996 6666665 4444335677764432 223333 234455632 24678999987 599999865
No 404
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=46.86 E-value=6.6 Score=33.67 Aligned_cols=62 Identities=11% Similarity=0.064 Sum_probs=35.8
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEE-EeCCCCCCCCHHHHHHHH-HhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFV-CACPKGFEPDKETVEKAR-KAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~-~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.||++||- +++..+++..+..- .+++ +.. ..++..+.+. +.|. .+.|++++++++|+|+.-.
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~-~~v~~v~~-----~~~~~~~~~~~~~g~----~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGT-GTLTRFFLECLKDR-YEIGYILS-----RSIDRARNLAEVYGG----KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESC-CHHHHHHHHTTC-----CCCEEC-----SSHHHHHHHHHHTCC----CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeC-CHHHHHHHHHHHHc-CcEEEEEe-----CCHHHHHHHHHHcCC----ccCCHHHHHhcCCEEEEeC
Confidence 47999994 88888888776554 4442 333 3344444443 3452 4667888899999999864
No 405
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=46.78 E-value=21 Score=30.40 Aligned_cols=31 Identities=6% Similarity=-0.085 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
..||++||- +++..|++..+..-|.+++...
T Consensus 6 ~mkI~IIG~-G~~G~sLA~~L~~~G~~V~~~~ 36 (232)
T 3dfu_A 6 RLRVGIFDD-GSSTVNMAEKLDSVGHYVTVLH 36 (232)
T ss_dssp CCEEEEECC-SCCCSCHHHHHHHTTCEEEECS
T ss_pred CcEEEEEee-CHHHHHHHHHHHHCCCEEEEec
Confidence 368999995 7787888877777788877654
No 406
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=46.74 E-value=61 Score=28.28 Aligned_cols=70 Identities=23% Similarity=0.415 Sum_probs=47.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHh------CCCCEEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVV------QGADVVYS 178 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~------~~aDviy~ 178 (261)
-.|.+|++.|..+.+....+.++...|.+++.+ . .++-++.+++.|...+.-.++..+.+ +++|+++-
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~-----~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-A-----RGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E-----CHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e-----CHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEE
Confidence 467999999987889999999999999987755 3 23446778888843222112333333 36888876
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 223 ~~ 224 (343)
T 3gaz_A 223 TL 224 (343)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 407
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=46.65 E-value=19 Score=33.54 Aligned_cols=67 Identities=15% Similarity=0.041 Sum_probs=45.0
Q ss_pred CCCcEEEEEcCC-----Cch----HHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCE
Q 024871 105 LEGTKVVYVGDG-----NNI----VHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADV 175 (261)
Q Consensus 105 l~~~~i~~vGd~-----~~v----~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDv 175 (261)
..|++|++.|=. .++ +..++..+...|.++.+.-|.-- .+ +. ....+.+|+++++++||+
T Consensus 330 ~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~--~~-------~~--~~~~~~~~~~~~~~~aD~ 398 (432)
T 3pid_A 330 RKPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQ--ED-------EF--FNSRVVRDLNAFKQEADV 398 (432)
T ss_dssp TCCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCC--SS-------EE--TTEEECCCHHHHHHHCSE
T ss_pred hcCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCC--hh-------hc--CCceEECCHHHHHhcCCE
Confidence 358899999931 223 34456666778999988877431 11 11 124568899999999999
Q ss_pred EEEeccc
Q 024871 176 VYSDVWA 182 (261)
Q Consensus 176 iy~~~w~ 182 (261)
|+..+|.
T Consensus 399 iv~~~~~ 405 (432)
T 3pid_A 399 IISNRMA 405 (432)
T ss_dssp EECSSCC
T ss_pred EEECCCC
Confidence 9998863
No 408
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=46.52 E-value=41 Score=30.79 Aligned_cols=71 Identities=14% Similarity=0.036 Sum_probs=45.4
Q ss_pred CCCcEEEEEcCCCchHH-HHHHHHhcC-CcEEEEeCCCCCCCCHHHHH-HHHHhCCCe--EEEEcCHHHHhC--CCCEEE
Q 024871 105 LEGTKVVYVGDGNNIVH-SWLLMASVI-PFHFVCACPKGFEPDKETVE-KARKAGISK--IEITNDPKEVVQ--GADVVY 177 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~-S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~-~~~~~g~~~--i~~~~d~~~a~~--~aDviy 177 (261)
-+.+||++||- +++.. .++..+... +++++.++- .+++..+ .++++|... +..++|.++.++ ++|+||
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d----~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVS----GNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEEC----SCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEc----CCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEE
Confidence 34589999997 66664 666666555 577764442 2233332 344566432 456789999887 789998
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
.-.
T Consensus 156 iat 158 (433)
T 1h6d_A 156 IIL 158 (433)
T ss_dssp ECS
T ss_pred EcC
Confidence 854
No 409
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=46.01 E-value=51 Score=28.01 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=42.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC-----C-cEEEEeCCCCCCCCHHHHHHHHH-hCCCeEE------------EEcCHHH
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI-----P-FHFVCACPKGFEPDKETVEKARK-AGISKIE------------ITNDPKE 168 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~-----g-~~~~~~~P~~~~~~~~~~~~~~~-~g~~~i~------------~~~d~~~ 168 (261)
.||+++| .+++...++..+..- | .++++... ++..+.+++ .|. .+. .+++ .+
T Consensus 9 m~I~iiG-~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r------~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~-~~ 79 (317)
T 2qyt_A 9 IKIAVFG-LGGVGGYYGAMLALRAAATDGLLEVSWIAR------GAHLEAIRAAGGL-RVVTPSRDFLARPTCVTDN-PA 79 (317)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHHHHTTSSEEEEEECC------HHHHHHHHHHTSE-EEECSSCEEEECCSEEESC-HH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCccccCCCCCEEEEEc------HHHHHHHHhcCCe-EEEeCCCCeEEecceEecC-cc
Confidence 5899999 477888887776666 7 78887753 234455555 552 121 1234 45
Q ss_pred HhCCCCEEEEec
Q 024871 169 VVQGADVVYSDV 180 (261)
Q Consensus 169 a~~~aDviy~~~ 180 (261)
+++++|+|+...
T Consensus 80 ~~~~~D~vil~v 91 (317)
T 2qyt_A 80 EVGTVDYILFCT 91 (317)
T ss_dssp HHCCEEEEEECC
T ss_pred ccCCCCEEEEec
Confidence 689999998865
No 410
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=45.98 E-value=20 Score=26.38 Aligned_cols=41 Identities=0% Similarity=0.024 Sum_probs=27.5
Q ss_pred CCCCHHHHHHHHhhh-ccEEEEeeCCcchHHHHhhhCCCcEE
Q 024871 39 KREETRDAARVLCRY-NDIIMARVFGHQDILDLAKFATVPVI 79 (261)
Q Consensus 39 kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~~a~~~~vPVI 79 (261)
.|...+...+..... +|+||+-+......+.+..++.+||+
T Consensus 94 ~g~~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~~PVl 135 (138)
T 1q77_A 94 IGPLSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLNLASL 135 (138)
T ss_dssp CSCHHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSSSEEE
T ss_pred cCCHHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCCCceE
Confidence 454444445554443 79988876665667788888889875
No 411
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=45.82 E-value=37 Score=28.79 Aligned_cols=36 Identities=8% Similarity=0.004 Sum_probs=31.3
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
..++|+++.+.|....+...++..+..-|.++++++
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEe
Confidence 458899999999888899999998888899988775
No 412
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=45.67 E-value=12 Score=34.81 Aligned_cols=116 Identities=11% Similarity=0.011 Sum_probs=61.0
Q ss_pred HHHHHHhcCCeEEEeCCCCc--CC----------CCCCCHHHHHHHHhhhccEEEEeeC-------CcchHHHHhhhCCC
Q 024871 16 FETGFSLLGGHAIYLGPDDI--QM----------GKREETRDAARVLCRYNDIIMARVF-------GHQDILDLAKFATV 76 (261)
Q Consensus 16 Fe~A~~~LGg~~~~l~~~~s--~~----------~kgEs~~Dt~~~ls~~~D~iv~R~~-------~~~~~~~~a~~~~v 76 (261)
...=...+|.++..+.+..+ .+ .-+.....+++.|..-..+=.+..+ ....+.++++..++
T Consensus 213 i~~lL~~~Gi~v~~~~~~~~~~el~~~~~A~~ni~~~~~~~~~A~~Le~~~giP~~~~~~P~G~~~T~~~Lr~ia~~~g~ 292 (460)
T 2xdq_A 213 LTLELKKQGIKVSGWLPAKRYTELPVIDEGYYVAGVNPFLSRTATTLIRRRKCQLITAPFPIGPDGTRTWIEQICATFGI 292 (460)
T ss_dssp HHHHHGGGTCCEEEEESCSSGGGCCCCCTTCEEEESSTTCHHHHHHHHHTTCCEEECCCCSBHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHccccCcEEEEcCHhHHHHHHHHHHHcCCCceecCcCccHHHHHHHHHHHHHHHCc
Confidence 34456678888877644310 00 1123334677777554443333322 11235566666665
Q ss_pred cEEeCCCCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 77 PVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 77 PVINa~~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
|- . ...--.+.+.|.+.-. ...+.|+|+++.||.. .+.|++..+.-+|++++.++
T Consensus 293 ~~---e-~i~~e~~~~~~~l~~~--~~~l~GKrv~i~g~~~-~~~~la~~L~elGm~vv~~g 347 (460)
T 2xdq_A 293 QP---Q-GLAEREAETWQKLSDY--LELVRGKSVFFMGDNL-LEISLARFLIRCGMRVLEIG 347 (460)
T ss_dssp CC---C-SCHHHHHHHHHTTHHH--HHHHTTCEEEECCCSS-CHHHHHHHHHHTTCEEEEEE
T ss_pred CH---H-HHHHHHHHHHHHHHHH--HHHhcCCEEEEECCch-HHHHHHHHHHHCCCEEEEeC
Confidence 41 0 0111122222322221 1237899999999854 55677777778999888665
No 413
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=45.63 E-value=1.3e+02 Score=24.99 Aligned_cols=98 Identities=9% Similarity=0.060 Sum_probs=54.3
Q ss_pred hHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCC-cchHHHHhhhCCCcEEeCCCCCCCh-
Q 024871 12 TRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFG-HQDILDLAKFATVPVINGLTDYNHP- 88 (261)
Q Consensus 12 TR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~-~~~~~~~a~~~~vPVINa~~~~~HP- 88 (261)
-...++.++..+|-+++....... .+......+.+ ++-+|.|++-... .....+..+..++|||..+.....+
T Consensus 45 ~~~gi~~~a~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~~~~~~ 120 (305)
T 3huu_A 45 VLNGINQACNVRGYSTRMTVSENS----GDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKSLNYEN 120 (305)
T ss_dssp HHHHHHHHHHHHTCEEEECCCSSH----HHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCCCSSTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCC----hHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCCCcccC
Confidence 345788899999999887654311 12223344444 3458988886432 2334444566799988854432211
Q ss_pred --------hHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 024871 89 --------CQIMADALTIIEHVGRLEGTKVVYVGDG 116 (261)
Q Consensus 89 --------tQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~ 116 (261)
.++--.+....-..| ..+|++++..
T Consensus 121 ~~~V~~D~~~~g~~a~~~L~~~G---~~~I~~i~~~ 153 (305)
T 3huu_A 121 IIHIDNDNIDAAYQLTQYLYHLG---HRHILFLQES 153 (305)
T ss_dssp CCEEECCHHHHHHHHHHHHHHTT---CCSEEEEEES
T ss_pred CcEEEeCHHHHHHHHHHHHHHCC---CCeEEEEcCC
Confidence 223222222222223 4789999754
No 414
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=45.57 E-value=40 Score=31.51 Aligned_cols=70 Identities=20% Similarity=0.267 Sum_probs=43.6
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHH-HHHhCCCeEEEE-----cCHHHHhCCCCEE
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEK-ARKAGISKIEIT-----NDPKEVVQGADVV 176 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~-~~~~g~~~i~~~-----~d~~~a~~~aDvi 176 (261)
.+++++|+++|- +.+....+..+... +.+++++... ++-.+. +++.+. ..... +++.++++++|+|
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~-----~~ka~~la~~~~~-~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT-----LANAQALAKPSGS-KAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS-----HHHHHHHHGGGTC-EEEECCTTCHHHHHHHHHTSSEE
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC-----HHHHHHHHHhcCC-cEEEEecCCHHHHHHHHcCCCEE
Confidence 478899999995 88999988887776 6788877643 221222 222232 22111 1456778999999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 93 In~t 96 (467)
T 2axq_A 93 ISLI 96 (467)
T ss_dssp EECS
T ss_pred EECC
Confidence 9875
No 415
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=45.46 E-value=21 Score=29.94 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
++.++++.+.|..+.+...++..+..-|.++++..
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 47889999999888899999999888999986654
No 416
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=44.88 E-value=65 Score=28.03 Aligned_cols=62 Identities=16% Similarity=0.206 Sum_probs=43.6
Q ss_pred HHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 100 EHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 100 e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..|.++ |.+..+..-.+|...+++..++.+|++.+++-|++ .++.-++.++.+| +.+..++
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~~~ 120 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPAS--MSTERRIILLAFG-VELVLTD 120 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHcC-CEEEEeC
Confidence 3445443 32233333358999999999999999999998977 4455566778888 5777765
No 417
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=44.86 E-value=34 Score=26.04 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=44.1
Q ss_pred CcEEEEEcCCCchHHHHH-HHH----hcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEE--EEcCH-HHHhCCCCEEEE
Q 024871 107 GTKVVYVGDGNNIVHSWL-LMA----SVIPFHFVCACPKGFEPDKETVEKARKAGISKIE--ITNDP-KEVVQGADVVYS 178 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~-~~~----~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~--~~~d~-~~a~~~aDviy~ 178 (261)
.++|.||.- +|+++|-+ ++. ..-++.+.-++-....+++..++.+++.|+. +. ....+ ++-+.++|+|++
T Consensus 3 ~~~VLFVC~-gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid-~s~~~ar~l~~~~~~~~D~Ii~ 80 (131)
T 1jf8_A 3 KKTIYFIST-GNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDID-ISNHTSDLIDNDILKQSDLVVT 80 (131)
T ss_dssp CEEEEEEES-SSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCC-CTTCCCCBCCHHHHHHCSEEEE
T ss_pred CCEEEEEcC-CcchHHHHHHHHHHHhcCCCEEEEcCcCCCCCCCHHHHHHHHHcCCC-cccCccccCChHHhccCCEEEE
Confidence 368999984 77888853 322 2224566655544446888888889998841 11 01111 344678999998
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
-.
T Consensus 81 m~ 82 (131)
T 1jf8_A 81 LC 82 (131)
T ss_dssp CS
T ss_pred cC
Confidence 63
No 418
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=44.62 E-value=35 Score=30.18 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=43.1
Q ss_pred cEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCC---------------eEEEEcCHHHHhC
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGIS---------------KIEITNDPKEVVQ 171 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~---------------~i~~~~d~~~a~~ 171 (261)
+||+++|- +++.+.++.++... +++++.++-.. + +.....++..|.. .+.+..|+++.++
T Consensus 3 irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~--~-~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~ 78 (334)
T 2czc_A 3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTK--P-DFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE 78 (334)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESS--C-SHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred cEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCC--H-HHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc
Confidence 58999996 88888888777655 46776554221 1 1222233333311 1234568888889
Q ss_pred CCCEEEEec
Q 024871 172 GADVVYSDV 180 (261)
Q Consensus 172 ~aDviy~~~ 180 (261)
++|+|+--.
T Consensus 79 ~vDvV~~aT 87 (334)
T 2czc_A 79 KVDIIVDAT 87 (334)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEECC
Confidence 999999854
No 419
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=44.45 E-value=32 Score=29.18 Aligned_cols=37 Identities=11% Similarity=-0.048 Sum_probs=31.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
.+++|+++.+.|..+.+...++..+..-|.++++++-
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999998888999999998889999888753
No 420
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=44.21 E-value=54 Score=28.97 Aligned_cols=60 Identities=18% Similarity=0.233 Sum_probs=43.6
Q ss_pred HhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 101 HVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 101 ~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
..|.++ |.+|+-.+. +|...+++..++.+|++.+++-|++ .++.-++.++..| +.+..+.
T Consensus 71 ~~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~~~ 131 (343)
T 2pqm_A 71 KDGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPST--MSVERQMIMKAFG-AELILTE 131 (343)
T ss_dssp HHTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCC--CCHHHHHHHHHCC-CEEEEEC
Confidence 345443 345555554 8999999999999999999888977 3455566778888 5777765
No 421
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=44.07 E-value=83 Score=29.07 Aligned_cols=62 Identities=24% Similarity=0.296 Sum_probs=43.8
Q ss_pred HHHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 99 IEHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 99 ~e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
.++.|.++ |.+|+-.. .+|...+++.+++.+|++++++-|+. .+..-++.++..| +.+..+.
T Consensus 152 a~~~G~l~~g~tVV~aS-sGN~G~AlA~aaa~~Gi~~~IvmP~~--~s~~k~~~l~~~G-AeVv~v~ 214 (435)
T 1jbq_A 152 AERDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEK--MSSEKVDVLRALG-AEIVRTP 214 (435)
T ss_dssp HHHHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSC--CCHHHHHHHHHTT-CEEEECC
T ss_pred HHHcCCCCCCCEEEEeC-CCHHHHHHHHHHHHcCCeEEEEeCCC--CCHHHHHHHHhCC-CEEEEec
Confidence 34456655 34444333 36999999999999999999999987 3455566778888 5676653
No 422
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=43.92 E-value=18 Score=33.24 Aligned_cols=71 Identities=14% Similarity=0.034 Sum_probs=46.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.++++||.++| .+....|.+..+...|.+++..--....+... .++ .| ..+..-+...++++++|+|+..+
T Consensus 2 ~~~~~~v~viG-~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~---~l~-~G-~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 2 DYQGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLD---KLP-EA-VERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp CCTTCCEEEEC-CHHHHHHHHHHHHTTTCCCEEEESSSSCTTGG---GSC-TT-SCEEESSCCHHHHHTCSEEEECT
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHhCCCEEEEEECCCCcchhH---Hhh-CC-CEEEECCCcHHHhccCCEEEeCC
Confidence 36789999999 46677777888888898887664444333221 123 45 34544443366778999988865
No 423
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=43.88 E-value=32 Score=30.10 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=39.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHh----cC----CcEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEcCHHHHhCC--CC
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMAS----VI----PFHFVCACPKGFEPDKETV-EKARKAGISKIEITNDPKEVVQG--AD 174 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~----~~----g~~~~~~~P~~~~~~~~~~-~~~~~~g~~~i~~~~d~~~a~~~--aD 174 (261)
+.+||++||- +++.+..+.... .+ +.+++-+|- ++++.. +.++++|.. ..+.|.++.+++ .|
T Consensus 5 ~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d----~~~~~a~~~a~~~g~~--~~~~d~~~ll~~~~iD 77 (390)
T 4h3v_A 5 TNLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG----RDAEAVRAAAGKLGWS--TTETDWRTLLERDDVQ 77 (390)
T ss_dssp CEEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC----SSHHHHHHHHHHHTCS--EEESCHHHHTTCTTCS
T ss_pred CcCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEc----CCHHHHHHHHHHcCCC--cccCCHHHHhcCCCCC
Confidence 4589999996 344433333222 11 246665543 233333 345567754 458899999864 78
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+||.-+
T Consensus 78 aV~I~t 83 (390)
T 4h3v_A 78 LVDVCT 83 (390)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 888754
No 424
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=43.77 E-value=1.4e+02 Score=27.73 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=48.3
Q ss_pred HHHHHHHhC-CCCCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHh-C---------------
Q 024871 95 ALTIIEHVG-RLEGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKA-G--------------- 156 (261)
Q Consensus 95 l~Ti~e~~g-~l~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~-g--------------- 156 (261)
|++.++.+. .-+.+||++||- +++.+.++...... +++++-++-... +...+.+++. |
T Consensus 10 l~~~l~~r~~~~k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~---era~~~a~~~yG~~~~~~~~~~~~~i~ 85 (446)
T 3upl_A 10 LARDLAARAETGKPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRL---PNTFKAIRTAYGDEENAREATTESAMT 85 (446)
T ss_dssp HHHHHHHHHHTTCCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSST---HHHHHHHHHHHSSSTTEEECSSHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCH---HHHHHHHHHhcCCccccccccchhhhh
Confidence 444443332 234589999997 66777777666555 678877764321 1111222222 3
Q ss_pred ----CCeEEEEcCHHHHhC--CCCEEEE
Q 024871 157 ----ISKIEITNDPKEVVQ--GADVVYS 178 (261)
Q Consensus 157 ----~~~i~~~~d~~~a~~--~aDviy~ 178 (261)
.+.+.+++|.++.++ +.|+||-
T Consensus 86 ~a~~~g~~~v~~D~eeLL~d~dIDaVvi 113 (446)
T 3upl_A 86 RAIEAGKIAVTDDNDLILSNPLIDVIID 113 (446)
T ss_dssp HHHHTTCEEEESCHHHHHTCTTCCEEEE
T ss_pred hhhccCCceEECCHHHHhcCCCCCEEEE
Confidence 013677999999997 5899984
No 425
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=43.55 E-value=1.3e+02 Score=24.49 Aligned_cols=119 Identities=8% Similarity=-0.012 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCCc-ch-HHHHhhhCCCcEEeCCCCCC-
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFGH-QD-ILDLAKFATVPVINGLTDYN- 86 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~~-~~-~~~~a~~~~vPVINa~~~~~- 86 (261)
+-...++.++..+|-+++..+... ..+...+.++.+ +.-+|.|++=.... .. +..+.+..++|||..+....
T Consensus 24 ~~~~gi~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~~iPvV~~~~~~~~ 99 (289)
T 1dbq_A 24 EIIEAVEKNCFQKGYTLILGNAWN----NLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAK 99 (289)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHHTTTSCEEEEECSSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCC----ChHHHHHHHHHHHhCCCCEEEEEeccCCHHHHHHHHhccCCCEEEEccCCCc
Confidence 345678889999999887764321 112233344443 44589888754332 23 33444447899877533211
Q ss_pred -C-hhHHHHHHHH----HHHHhCCCCCcEEEEEcCCCc------hHHHHHHHHhcCCcE
Q 024871 87 -H-PCQIMADALT----IIEHVGRLEGTKVVYVGDGNN------IVHSWLLMASVIPFH 133 (261)
Q Consensus 87 -H-PtQ~L~Dl~T----i~e~~g~l~~~~i~~vGd~~~------v~~S~~~~~~~~g~~ 133 (261)
. ......|-+. +-+++...-..+|++++.... -...+...+...|.+
T Consensus 100 ~~~~~~V~~d~~~~~~~~~~~L~~~G~~~i~~i~~~~~~~~~~~R~~g~~~~l~~~g~~ 158 (289)
T 1dbq_A 100 ADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIK 158 (289)
T ss_dssp SSSCEEEEECHHHHHHHHHHHHHHTTCCSEEEECCC------CHHHHHHHHHHHHTTCC
T ss_pred cCcCCEEEeCcHHHHHHHHHHHHHCCCCeEEEEecCCccccHHHHHHHHHHHHHHCCCC
Confidence 1 1122222111 112221122478999975321 123345555556654
No 426
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=43.52 E-value=43 Score=28.95 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=42.3
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC------Ce-----EEEEcCHHHHhCCCCEE
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI------SK-----IEITNDPKEVVQGADVV 176 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~------~~-----i~~~~d~~~a~~~aDvi 176 (261)
.||+++|- +++.-+++..++.-|.++++.+.+. .+..++.|. +. +..++++++ ++++|+|
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~-------~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~v 73 (312)
T 3hn2_A 3 LRIAIVGA-GALGLYYGALLQRSGEDVHFLLRRD-------YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLV 73 (312)
T ss_dssp -CEEEECC-STTHHHHHHHHHHTSCCEEEECSTT-------HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEEcCc-------HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEE
Confidence 58999995 7788888777777788888887643 133445442 11 223567654 7899998
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+...
T Consensus 74 ilav 77 (312)
T 3hn2_A 74 LVGL 77 (312)
T ss_dssp EECC
T ss_pred EEec
Confidence 8864
No 427
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=43.41 E-value=61 Score=27.91 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=47.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh------CCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV------QGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~------~~aDvi 176 (261)
-.|.+|++.|..+.+.+..+.++...|.+++.++. .++-++.+++.|...+.-. .+..+.+ +++|++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-----~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS-----SPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-----SHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEE
Confidence 35789999997788999999998889998877654 3445567778874322211 2233332 368888
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-..
T Consensus 214 id~~ 217 (325)
T 3jyn_A 214 YDGV 217 (325)
T ss_dssp EESS
T ss_pred EECC
Confidence 7653
No 428
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.24 E-value=82 Score=25.31 Aligned_cols=65 Identities=23% Similarity=0.208 Sum_probs=43.2
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEcC------HHHH-hCCCCEEEEe
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKAR-KAGISKIEITND------PKEV-VQGADVVYSD 179 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~-~~g~~~i~~~~d------~~~a-~~~aDviy~~ 179 (261)
.||+++|. +++..+++..+...|.+++++.. +++..+.+. +.|. .+ +.-| ++++ +++||+|+..
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~-----~~~~~~~l~~~~~~-~~-i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINK-----DRELCEEFAKKLKA-TI-IHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEES-----CHHHHHHHHHHSSS-EE-EESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-----CHHHHHHHHHHcCC-eE-EEcCCCCHHHHHhcCcccCCEEEEe
Confidence 37899994 88999999888888988888764 344444433 3342 22 2222 3343 7899999886
Q ss_pred c
Q 024871 180 V 180 (261)
Q Consensus 180 ~ 180 (261)
.
T Consensus 73 ~ 73 (218)
T 3l4b_C 73 T 73 (218)
T ss_dssp C
T ss_pred c
Confidence 4
No 429
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=43.05 E-value=57 Score=30.91 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=43.2
Q ss_pred HHHHHHHhC---CCCCcEEEE-EcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 95 ALTIIEHVG---RLEGTKVVY-VGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 95 l~Ti~e~~g---~l~~~~i~~-vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
|+.++|+|+ .|+|.+|+. ++-..++ --+++.+...|.++..++.+-|...++......+.|.
T Consensus 60 l~~~~~~~~~~~pl~G~ri~~~lh~~~~t-a~li~tL~~~GA~V~~~~~n~~stqd~~aaal~~~gi 125 (494)
T 3d64_A 60 LVQIRDEYKAQQPLKGARIAGSLHMTIQT-GVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGT 125 (494)
T ss_dssp HHHHHHHTTTTCTTTTCEEEEESCCSHHH-HHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCCCCEEEEEeCCcHHH-HHHHHHHHhCCCEEEEEecCCcccchHHHHHHHhCCc
Confidence 778889886 399999987 4431222 2367778888999999988777777766444444564
No 430
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=42.98 E-value=79 Score=27.26 Aligned_cols=71 Identities=15% Similarity=0.202 Sum_probs=48.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh------CCCCEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV------QGADVV 176 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~------~~aDvi 176 (261)
-.|.+|++.|..+.+....+.++...|.+++.++. .++-++.+++.|...+.-. ++..+.+ ++.|++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-----~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS-----TDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-----SHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence 46799999997788999999999899999877764 2445567788874322211 2233322 357888
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-..
T Consensus 222 id~~ 225 (334)
T 3qwb_A 222 FDSV 225 (334)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 431
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.76 E-value=61 Score=27.25 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=47.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcC------HHHHhC------
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITND------PKEVVQ------ 171 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d------~~~a~~------ 171 (261)
+++|+++.+.|..+.+...++..+..-|.+++++.-..-...+.+.+..++.|.....+.-| ++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 58999999999888899999998888899988763221111122333344445222222222 233444
Q ss_pred -CCCEEEEec
Q 024871 172 -GADVVYSDV 180 (261)
Q Consensus 172 -~aDviy~~~ 180 (261)
..|+++...
T Consensus 108 g~iD~lvnnA 117 (271)
T 3v2g_A 108 GGLDILVNSA 117 (271)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 789998853
No 432
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=42.73 E-value=59 Score=29.75 Aligned_cols=23 Identities=13% Similarity=0.297 Sum_probs=20.1
Q ss_pred CeEEEEcCHHHHhCCCCEEEEec
Q 024871 158 SKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 158 ~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.++..++|++++++++|+|+.-.
T Consensus 103 ~~i~~t~dl~~al~~ad~ii~av 125 (391)
T 4fgw_A 103 DNLVANPDLIDSVKDVDIIVFNI 125 (391)
T ss_dssp SSEEEESCHHHHHTTCSEEEECS
T ss_pred CCcEEeCCHHHHHhcCCEEEEEC
Confidence 46889999999999999998853
No 433
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=42.71 E-value=77 Score=26.79 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=43.9
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE-----cCHHHHhCCCCEEEEec
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT-----NDPKEVVQGADVVYSDV 180 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~-----~d~~~a~~~aDviy~~~ 180 (261)
++|+++|..+.+..+++..+..-|.+++..+-+.- .....++.....|. .+... +++.++++++|+|+...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~~~~~~~l~~~~v-~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS-SKTTLLDEFQSLGA-IIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC-SCHHHHHHHHHTTC-EEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC-chhhHHHHhhcCCC-EEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 58999998888888888877777877765542211 12222222333442 22221 23567899999999865
No 434
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=42.70 E-value=1.1e+02 Score=26.66 Aligned_cols=70 Identities=21% Similarity=0.065 Sum_probs=46.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc---CHHHHh-CCCCEEEEec
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN---DPKEVV-QGADVVYSDV 180 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~---d~~~a~-~~aDviy~~~ 180 (261)
-.|.+|+++|. +.+.+..+.++..+|.+++.++...- -++.+++.|...+.-.. +..+.+ .++|+|+-..
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~ 251 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSR-----KREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCA 251 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSST-----THHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECC
Confidence 46899999998 88999999998889998776654322 23556777743322111 433444 4789887653
No 435
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=42.65 E-value=41 Score=29.21 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=39.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+.+|+-.+. +|...|++..++.+|++++++-|++ .++..++.++..| +.+..++
T Consensus 54 ~~~vv~~ss-GN~g~alA~~a~~~G~~~~i~~p~~--~~~~k~~~~~~~G-a~V~~~~ 107 (318)
T 2rkb_A 54 CRHLVCSSG-GNAGIAAAYAARKLGIPATIVLPES--TSLQVVQRLQGEG-AEVQLTG 107 (318)
T ss_dssp CCEEEECCC-SHHHHHHHHHHHHHTCCEEEEECTT--CCHHHHHHHHHTT-CEEEECC
T ss_pred CCEEEEECC-chHHHHHHHHHHHcCCCEEEEECCC--CcHHHHHHHHhcC-CEEEEEC
Confidence 445554443 8999999999999999988888977 3455566777888 5676654
No 436
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=42.32 E-value=77 Score=27.19 Aligned_cols=66 Identities=14% Similarity=0.261 Sum_probs=41.3
Q ss_pred CcEEEEEcCCCchHHH-HHHHHhcC-CcEEE-EeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHS-WLLMASVI-PFHFV-CACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S-~~~~~~~~-g~~~~-~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+||++||- +++... .+..+... +++++ ++.+.. . ...+.+++.|.. .++|.++...++|+|+...
T Consensus 5 ~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~-~---~~~~~~~~~g~~---~~~~~~~l~~~~D~V~i~t 73 (319)
T 1tlt_A 5 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTR-A---KALPICESWRIP---YADSLSSLAASCDAVFVHS 73 (319)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSC-T---THHHHHHHHTCC---BCSSHHHHHTTCSEEEECS
T ss_pred cceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCH-H---HHHHHHHHcCCC---ccCcHHHhhcCCCEEEEeC
Confidence 479999996 667765 66655444 67877 444422 1 111234556642 5678776667899999764
No 437
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=42.30 E-value=72 Score=26.20 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=39.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
+.+++|+++|. +.+.-.++..+...| +++++.+....+.+.+.+.+++.|+
T Consensus 139 ~~~~~v~vvG~-G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~~l~~~gv 189 (297)
T 3fbs_A 139 LDQGKIGVIAA-SPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHALLAARGV 189 (297)
T ss_dssp GTTCEEEEECC-STTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHHHHHHTTC
T ss_pred hcCCEEEEEec-CccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHHHHHHCCc
Confidence 56899999996 566777777777778 9998887666777877777877774
No 438
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=41.50 E-value=57 Score=27.40 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=43.7
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHH-HHhhhccEEEEeeCCcc---hHHHHhhhCCCcEEeCCC
Q 024871 10 MRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAAR-VLCRYNDIIMARVFGHQ---DILDLAKFATVPVINGLT 83 (261)
Q Consensus 10 tRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~-~ls~~~D~iv~R~~~~~---~~~~~a~~~~vPVINa~~ 83 (261)
.+-.-.++.++..+|.+++..+.... .+...+.++ .+++-+|.|++-..... ...+.++..++|||..+.
T Consensus 18 ~~~~~gi~~~a~~~g~~~~~~~~~~~----~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 18 QKDRDIFVKKAESLGAKVFVQSANGN----EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECTTC----HHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESS
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCC----HHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECC
Confidence 34566789999999999888754311 122233333 33455898888765443 234445667999988543
No 439
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=41.40 E-value=34 Score=28.15 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=30.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
+++|+++.+.|..+.+...++..+..-|.++++++-
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 477899999998888999999888888999887653
No 440
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=41.35 E-value=72 Score=29.90 Aligned_cols=62 Identities=23% Similarity=0.264 Sum_probs=44.2
Q ss_pred HHHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 99 IEHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 99 ~e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
.+..|.++ |.+| +.+-.+|...+++.+++.+|++.+++-|+. .++.-++.++.+| +.+..+.
T Consensus 104 a~~~g~~~~g~~v-v~~ssGN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~v~~~~ 166 (527)
T 3pc3_A 104 AEEQGLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVMPEK--MSNEKVSALRTLG-AKIIRTP 166 (527)
T ss_dssp HHHHTCCCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HHHcCCCCCCCEE-EEeCCCHHHHHHHHHHHHhCCeEEEEEcCC--CCHHHHHHHHHCC-CEEEEeC
Confidence 34556554 3444 445458999999999999999999888975 4455566777888 5676654
No 441
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=41.32 E-value=1.5e+02 Score=26.05 Aligned_cols=70 Identities=9% Similarity=0.132 Sum_probs=46.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHhC-----CCCEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVVQ-----GADVVY 177 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~~-----~aDviy 177 (261)
-.|.+|++.|..+.+....+.++...|.+++..+ . ++-++.+++.|...+.-+ .|..+.++ ++|+++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~-----~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-S-----PHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-C-----GGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-C-----HHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEE
Confidence 4688999999878899999999989999876553 1 233567888885333222 23333332 478888
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
-..
T Consensus 237 d~~ 239 (371)
T 3gqv_A 237 DCI 239 (371)
T ss_dssp ESS
T ss_pred ECC
Confidence 654
No 442
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=41.21 E-value=1.1e+02 Score=28.84 Aligned_cols=83 Identities=18% Similarity=0.113 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEE-EEEcCCCchHHHH--HHHHhcCCcEEEEeCCCCCCCCHHH---HHHHHHhCCCeEEEE
Q 024871 90 QIMADALTIIEHVGRLEGTKV-VYVGDGNNIVHSW--LLMASVIPFHFVCACPKGFEPDKET---VEKARKAGISKIEIT 163 (261)
Q Consensus 90 Q~L~Dl~Ti~e~~g~l~~~~i-~~vGd~~~v~~S~--~~~~~~~g~~~~~~~P~~~~~~~~~---~~~~~~~g~~~i~~~ 163 (261)
+++++. +.+.++..++.+| +++|.+||=.--+ +..+...|.++.+..|..- .+++. ++.+++.|+ .+. .
T Consensus 37 ~a~a~~--i~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~g~-~~~-~ 111 (502)
T 3rss_A 37 ISVVLA--MEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKK-KTPDCEYNYGLYKKFGG-KVV-E 111 (502)
T ss_dssp HHHHHH--HHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSS-CCHHHHHHHHHHHHTTC-CEE-S
T ss_pred HHHHHH--HHHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCC-CCHHHHHHHHHHHhCCC-cee-c
Confidence 444443 3556665555555 5788888844444 4456667776665544322 44443 344556664 343 2
Q ss_pred cCHHHHhCCCCEEE
Q 024871 164 NDPKEVVQGADVVY 177 (261)
Q Consensus 164 ~d~~~a~~~aDviy 177 (261)
++++..++++|+|+
T Consensus 112 ~~~~~~~~~~dliV 125 (502)
T 3rss_A 112 QFEPSILNEFDVVV 125 (502)
T ss_dssp CCCGGGGGGCSEEE
T ss_pred ccccccCCCCCEEE
Confidence 23445577888765
No 443
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=41.21 E-value=39 Score=29.47 Aligned_cols=74 Identities=18% Similarity=0.119 Sum_probs=45.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCc-------EEEEeCCCCC-C-CCHHHHHHHHHhC---CCeEEEEcCHHHHhCCCC
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPF-------HFVCACPKGF-E-PDKETVEKARKAG---ISKIEITNDPKEVVQGAD 174 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~-------~~~~~~P~~~-~-~~~~~~~~~~~~g---~~~i~~~~d~~~a~~~aD 174 (261)
..||+++|..+.+..+++..+..-|. ++++...... . ......+ ....+ ...+....++.++++++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~d-l~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVME-LEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhh-hhcccccccCCeEeccChHHHhCCCC
Confidence 46899999878888888877665564 6776642210 0 0000111 11111 124666678899999999
Q ss_pred EEEEecc
Q 024871 175 VVYSDVW 181 (261)
Q Consensus 175 viy~~~w 181 (261)
+|+...-
T Consensus 83 ~Vih~Ag 89 (327)
T 1y7t_A 83 YALLVGA 89 (327)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999753
No 444
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=41.07 E-value=38 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
++|+++.+.|..+.+...++..+..-|.++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 6789999999888899999988888899988764
No 445
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=41.06 E-value=1.3e+02 Score=26.25 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=47.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh-----CCCCEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV-----QGADVVY 177 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~-----~~aDviy 177 (261)
-.|.+|++.|..+.+....+.++...|.+++.++.. ++-++.+++.|...+.-. ++..+.+ +++|+++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS-----DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 468999999977889999999988899987766542 445566777774322211 2333333 3578887
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
-..
T Consensus 237 d~~ 239 (362)
T 2c0c_A 237 ESV 239 (362)
T ss_dssp ECS
T ss_pred ECC
Confidence 654
No 446
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=40.57 E-value=90 Score=27.42 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=46.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE----cCHHHHhC-----CCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEIT----NDPKEVVQ-----GAD 174 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~----~d~~~a~~-----~aD 174 (261)
-.|.+|++.| .+.+.+..+.++..+|. +++.+.+. ++-++.+++.|...+.-. ++..+.++ ++|
T Consensus 190 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 190 TPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH-----KDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC-----HHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCC
Confidence 4678999999 47899999999888898 77766543 233566778885332211 23444332 689
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+-..
T Consensus 264 vvid~~ 269 (373)
T 1p0f_A 264 YAVECA 269 (373)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 988654
No 447
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=40.47 E-value=40 Score=29.93 Aligned_cols=116 Identities=10% Similarity=-0.041 Sum_probs=62.5
Q ss_pred CHHHHHHHHhhhccEEEEeeCCcchHHHHhhhCCCcEEeCCCCCCChhHHHHHH--HHHHH---HhCCCCC-cEEEEEcC
Q 024871 42 ETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADA--LTIIE---HVGRLEG-TKVVYVGD 115 (261)
Q Consensus 42 s~~Dt~~~ls~~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQ~L~Dl--~Ti~e---~~g~l~~-~~i~~vGd 115 (261)
|++|+-....+..+.+ .+++-.. +..+.+..++.|. .--....||-+.=|- +.+.. ..|..++ .+|+-.+
T Consensus 8 ~~~~i~~a~~~i~~~i-~~TPL~~-~~~l~~~~g~~i~-~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~vv~~S- 83 (346)
T 3l6b_A 8 SFADVEKAHINIRDSI-HLTPVLT-SSILNQLTGRNLF-FKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTHS- 83 (346)
T ss_dssp CHHHHHHHHHHHGGGS-CCCCEEC-CHHHHHHHTSEEE-EEEGGGSGGGBTHHHHHHHHHHTTC-----CCCSCEEEEC-
T ss_pred CHHHHHHHHHHHhccc-CCCCeEE-chhhHHHhCCeEE-EEeCCCCCCCCcHHHHHHHHHHHHHHhccccCCCEEEEeC-
Confidence 5666666555555543 2343322 2334444343332 112334577554441 11111 1222223 3444444
Q ss_pred CCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 116 GNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 116 ~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
.+|...+++.+++.+|++.+++-|++ .++.-++.++..| +.+..+.
T Consensus 84 sGNhg~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~v~ 129 (346)
T 3l6b_A 84 SGNHGQALTYAAKLEGIPAYIVVPQT--APDCKKLAIQAYG-ASIVYCE 129 (346)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCC--CCHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999988888987 3444556677888 5666553
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=40.29 E-value=46 Score=28.59 Aligned_cols=63 Identities=14% Similarity=0.079 Sum_probs=39.4
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCC--CCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 103 GRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPK--GFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 103 g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~--~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
|.++|.||+++|+..+-. .++..+...|.++.+...+ .|. +.| ....+++.+.++++|+|++.
T Consensus 1 ~~~~~m~i~v~~~~~~~~-~~~~~L~~~g~~v~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~d~ii~~ 65 (293)
T 3d4o_A 1 GMLTGKHVVIIGGDARQL-EIIRKLSTFDAKISLVGFDQLDDG----------FIG---VTKMRIDEVDWNTVDAILLP 65 (293)
T ss_dssp CCCTTCEEEEECBCHHHH-HHHHHHHHTTCEEEEESCTTCC------------CTT---CEEECGGGCCGGGCSEEECC
T ss_pred CCccCcEEEEECCCHHHH-HHHHHHHhCCCEEEEecccccccc----------ccc---cccccchHHHHhcCCEEEec
Confidence 457899999999654432 3345556678887765321 111 112 23456778889999999973
No 449
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=40.20 E-value=82 Score=27.68 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=43.0
Q ss_pred HHhCCC-CCcEE-EEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 100 EHVGRL-EGTKV-VYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 100 e~~g~l-~~~~i-~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..|.+ .|.+| +-.+ .+|...+++.+++.+|++.+++-|++ .+..-++.++..| +.+..++
T Consensus 63 ~~~g~l~~g~~vvv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~~~ 125 (334)
T 3tbh_A 63 EKEGKLIPGKSIVVESS-SGNTGVSLAHLGAIRGYKVIITMPES--MSLERRCLLRIFG-AEVILTP 125 (334)
T ss_dssp HHTTSCCTTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HHcCCCCCCCeEEEEeC-CCHHHHHHHHHHHHhCCCEEEEECCC--CCHHHHHHHHHCC-CEEEEEC
Confidence 444553 34553 3333 48999999999999999999888987 3445556677888 5777664
No 450
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=40.19 E-value=1.5e+02 Score=24.17 Aligned_cols=69 Identities=9% Similarity=-0.041 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHh-hhccEEEEeeCC-cchHHHHhhhCCCcEEeCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLC-RYNDIIMARVFG-HQDILDLAKFATVPVINGLT 83 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls-~~~D~iv~R~~~-~~~~~~~a~~~~vPVINa~~ 83 (261)
+-.-.++.++.++|-+++...... ..+......+.+. +-+|.|++-... .....+..+..++|||-.+.
T Consensus 30 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 100 (292)
T 3k4h_A 30 EVIRGISSFAHVEGYALYMSTGET----EEEIFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGK 100 (292)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCS----HHHHHHHHHHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCC----CHHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECC
Confidence 445678889999999888765431 1222334444443 458988885432 23344555667999887543
No 451
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=40.14 E-value=74 Score=27.70 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=47.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE-cCHHHHh------CCCCEEE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT-NDPKEVV------QGADVVY 177 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~-~d~~~a~------~~aDviy 177 (261)
-.|.+|++.|..+.+....+.++..+|.+++.++... +-++.+++.|...+.-. ++..+.+ +++|+++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT-----AATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEE
Confidence 4689999999878899999999999999887766432 23456777774322211 2333333 2588888
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
-..
T Consensus 233 d~~ 235 (342)
T 4eye_A 233 DPI 235 (342)
T ss_dssp ESC
T ss_pred ECC
Confidence 654
No 452
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=40.08 E-value=30 Score=29.85 Aligned_cols=65 Identities=11% Similarity=0.129 Sum_probs=39.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
.+||++||- +++...++..+... +.+++.++-. +++ .+++.. ..+..++|.++.++ ++|+|+.-.
T Consensus 10 ~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~----~~~---~~~~~~-~~~~~~~~~~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 10 PVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASS----NPD---NLALVP-PGCVIESDWRSVVSAPEVEAVIIAT 77 (315)
T ss_dssp CEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEES----CHH---HHTTCC-TTCEEESSTHHHHTCTTCCEEEEES
T ss_pred cceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeC----CHH---HHHHHH-hhCcccCCHHHHhhCCCCCEEEEeC
Confidence 479999996 44555555555444 5776633321 222 122222 11456789999986 799998864
No 453
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=40.02 E-value=33 Score=30.43 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=22.2
Q ss_pred HHHHHhhhccEEEEeeCCc-chHHHHhhhCCCcEE-eC
Q 024871 46 AARVLCRYNDIIMARVFGH-QDILDLAKFATVPVI-NG 81 (261)
Q Consensus 46 t~~~ls~~~D~iv~R~~~~-~~~~~~a~~~~vPVI-Na 81 (261)
.-.+...-+|+|++-.... +.+.++++..++|++ |.
T Consensus 181 a~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~ 218 (305)
T 3ih1_A 181 ANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANM 218 (305)
T ss_dssp HHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEee
Confidence 3334444567777765443 556777777778865 64
No 454
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=39.76 E-value=50 Score=28.01 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=44.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC-CCCCHHH---HHHHHHhCCCeEEEE-----cCHHHHhCCCCEEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG-FEPDKET---VEKARKAGISKIEIT-----NDPKEVVQGADVVY 177 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~-~~~~~~~---~~~~~~~g~~~i~~~-----~d~~~a~~~aDviy 177 (261)
.++|++.|..+.+..+++..+..-|.+++..+-+. -...++. ++.....+. .+... +++.++++++|+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v-~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV-TIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTC-EEEECCTTCHHHHHHHHTTCSEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCc-EEEEecCCCHHHHHHHHcCCCEEE
Confidence 46899999888888888887777787777654322 1111111 111223342 22211 23567899999999
Q ss_pred Eec
Q 024871 178 SDV 180 (261)
Q Consensus 178 ~~~ 180 (261)
...
T Consensus 83 ~~a 85 (321)
T 3c1o_A 83 SAL 85 (321)
T ss_dssp ECC
T ss_pred ECC
Confidence 875
No 455
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=39.75 E-value=40 Score=30.23 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=39.0
Q ss_pred cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 108 TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 108 ~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
.+|+-.+ .+|...+++.+++++|++.+++-|++ .++..++.++..| +.+..+.
T Consensus 94 ~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~Vv~v~ 146 (364)
T 4h27_A 94 AHFVCSS-SGNAGMAAAYAARQLGVPATIVVPGT--TPALTIERLKNEG-ATVKVVG 146 (364)
T ss_dssp CEEEECC-SSHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEeC-CChHHHHHHHHHHHhCCceEEEECCC--CCHHHHHHHHHcC-CEEEEEC
Confidence 3444444 48999999999999999988888987 4455566777788 5666654
No 456
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=39.62 E-value=1e+02 Score=27.16 Aligned_cols=65 Identities=15% Similarity=0.292 Sum_probs=40.5
Q ss_pred CcEEEEEcCCCchHHH-HHHHHhcC-CcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhC--CCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHS-WLLMASVI-PFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQ--GADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S-~~~~~~~~-g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~--~aDviy~~~ 180 (261)
.+||++||- +++... .+..+... +++++-++-. +++.. .++.+ ....+.|.++.++ +.|+||.-.
T Consensus 7 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~----~~~~~--~~~~~--~~~~~~~~~~ll~~~~~D~V~i~t 75 (364)
T 3e82_A 7 TINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASR----DEEKV--KRDLP--DVTVIASPEAAVQHPDVDLVVIAS 75 (364)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECS----CHHHH--HHHCT--TSEEESCHHHHHTCTTCSEEEECS
T ss_pred cceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcC----CHHHH--HhhCC--CCcEECCHHHHhcCCCCCEEEEeC
Confidence 479999997 555554 44444444 6787744422 22221 12333 2466899999998 789988864
No 457
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.40 E-value=89 Score=25.67 Aligned_cols=122 Identities=15% Similarity=0.068 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHH-HHhhhccEEEEeeCCcc---hHHHHhhhCCCcEEeCCCCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAAR-VLCRYNDIIMARVFGHQ---DILDLAKFATVPVINGLTDYN 86 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~-~ls~~~D~iv~R~~~~~---~~~~~a~~~~vPVINa~~~~~ 86 (261)
+-...++.++..+|.+++..+... ..+...+.++ .+++-+|.|++=..... ...+.+...++|||..+....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~ 100 (293)
T 3l6u_A 25 RLINAFKAEAKANKYEALVATSQN----SRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMIR 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSS----CHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCCC
T ss_pred HHHHHHHHHHHHcCCEEEEECCCC----CHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCCC
Confidence 445678899999999988875431 1122233333 33455898888554433 233444567999888544322
Q ss_pred C----h------hHHHHHHHH-HHHHh-C--CCCCcEEEEEcCC-Cc-h----HHHHHHHHhcC-CcEEEE
Q 024871 87 H----P------CQIMADALT-IIEHV-G--RLEGTKVVYVGDG-NN-I----VHSWLLMASVI-PFHFVC 136 (261)
Q Consensus 87 H----P------tQ~L~Dl~T-i~e~~-g--~l~~~~i~~vGd~-~~-v----~~S~~~~~~~~-g~~~~~ 136 (261)
. | .++--.+.. +.+++ | .....+|++++.. .. . ...+...+... |.++..
T Consensus 101 ~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g~~~~~ 171 (293)
T 3l6u_A 101 SDAVVSSITSNNQMIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPTLSIVD 171 (293)
T ss_dssp CTTCSEEEEECHHHHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCcceeEEecCHHHHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCCcEEee
Confidence 2 1 122221111 12212 2 1122499999743 22 2 23355566777 877654
No 458
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=39.39 E-value=58 Score=27.90 Aligned_cols=77 Identities=9% Similarity=-0.031 Sum_probs=48.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh------CCCeEEE-----EcCHHHHhCCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA------GISKIEI-----TNDPKEVVQGA 173 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~------g~~~i~~-----~~d~~~a~~~a 173 (261)
+.+++|.+.|..+.+...++..+..-|.+++.+.-..- ......+..+.. +...+.. .++++++++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST-GHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-CCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC-CchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 56899999999888999998887777888776642221 122223333321 1111111 12246788999
Q ss_pred CEEEEeccc
Q 024871 174 DVVYSDVWA 182 (261)
Q Consensus 174 Dviy~~~w~ 182 (261)
|+|+-..+.
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999988753
No 459
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=39.38 E-value=73 Score=27.44 Aligned_cols=48 Identities=10% Similarity=0.148 Sum_probs=37.6
Q ss_pred CCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcC
Q 024871 115 DGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITND 165 (261)
Q Consensus 115 d~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d 165 (261)
-.+|...+++..++.+|++.+++-|++ .++.-++.++..| +.+..++.
T Consensus 72 SsGN~g~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~V~~~~~ 119 (303)
T 1o58_A 72 TSGNMGIAIAMIGAKRGHRVILTMPET--MSVERRKVLKMLG-AELVLTPG 119 (303)
T ss_dssp CSSHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTT-CEEEEECG
T ss_pred CchHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcC-CEEEEECC
Confidence 348999999999999999999888977 3455566777888 57776653
No 460
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=39.35 E-value=1.1e+02 Score=25.43 Aligned_cols=68 Identities=7% Similarity=-0.020 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhh-hccEEEEeeCCc-chHHHHhhhCCCcEEeCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCR-YNDIIMARVFGH-QDILDLAKFATVPVINGLT 83 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~-~~D~iv~R~~~~-~~~~~~a~~~~vPVINa~~ 83 (261)
+-...++.++..+|-+++...... .+......+.+.. -+|.|++-.... ....+..+..++|||..+.
T Consensus 27 ~~~~gi~~~a~~~g~~~~~~~~~~-----~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 96 (294)
T 3qk7_A 27 EMISWIGIELGKRGLDLLLIPDEP-----GEKYQSLIHLVETRRVDALIVAHTQPEDFRLQYLQKQNFPFLALGR 96 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECT-----TCCCHHHHHHHHHTCCSEEEECSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC-----hhhHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHhCCCCEEEECC
Confidence 345678889999999988775432 3334555665554 589888865432 2334445667899887543
No 461
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=39.30 E-value=46 Score=29.85 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=41.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE----EcCHHHHhCCCCEEEEec
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI----TNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~----~~d~~~a~~~aDviy~~~ 180 (261)
.+++|+++|- +++....+..+... .+++++... ++-.+.+.+.+ ..+.. .++++++++++|+|+...
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~-----~~~a~~la~~~-~~~~~d~~~~~~l~~ll~~~DvVIn~~ 85 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVN-----NENLEKVKEFA-TPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESC-----HHHHHHHTTTS-EEEECCTTCHHHHHHHHTTCSCEEECC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECC-----HHHHHHHHhhC-CeEEEecCCHHHHHHHHhCCCEEEECC
Confidence 3589999995 78888888777666 777777542 22222221222 11211 234678899999999863
No 462
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=38.93 E-value=1.9e+02 Score=24.93 Aligned_cols=155 Identities=10% Similarity=0.018 Sum_probs=84.4
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeC-CcchH------HHHhhhC-CC-cEEe
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVF-GHQDI------LDLAKFA-TV-PVIN 80 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~-~~~~~------~~~a~~~-~v-PVIN 80 (261)
+...=+..++.++|....|..-. +. .|.+.+.++-+... ...+-+=.+ +...+ ...|+.. .| .|++
T Consensus 19 ~SP~~hn~~f~~~gl~~~Y~~~~---v~-~~~l~~~v~~l~~~~~~G~nVTiP~K~~v~~~ld~ls~~A~~iGAVNTv~~ 94 (282)
T 3fbt_A 19 HSSYIHKLIFEKVGIKGIYNLFE---VP-KEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEISEKARKIGAVNTLKF 94 (282)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEE---CC-GGGHHHHHHHHHHTTCCEEEECTTCTTGGGGGCSEECHHHHHHTCCCEEEE
T ss_pred chHHHHHHHHHHcCCCcEEEEEE---CC-HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhcCHHHHHcCCcceEEe
Confidence 34445677888999987765321 22 37788888766643 455555443 22222 2223221 11 3444
Q ss_pred CCC-CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCC
Q 024871 81 GLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGIS 158 (261)
Q Consensus 81 a~~-~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~ 158 (261)
-++ -..+=|-...=+..+.+....++|++++++|- +.++.+.+..+...|. +++++.-. . +++++....
T Consensus 95 ~~g~l~G~NTD~~G~~~~L~~~~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt-----~---~ka~~La~~ 165 (282)
T 3fbt_A 95 SREGISGFNTDYIGFGKMLSKFRVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRN-----P---EKTSEIYGE 165 (282)
T ss_dssp CSSCEEEECCHHHHHHHHHHHTTCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESC-----H---HHHHHHCTT
T ss_pred eCCEEEeeCCcHHHHHHHHHHcCCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCC-----H---HHHHHHHHh
Confidence 222 11222333222233334333589999999996 5788888888888898 88877632 1 223332100
Q ss_pred -eEEEEcCHHHHhCCCCEEEEec
Q 024871 159 -KIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 159 -~i~~~~d~~~a~~~aDviy~~~ 180 (261)
...-.+++++ + ++|+|+..+
T Consensus 166 ~~~~~~~~l~~-l-~~DivInaT 186 (282)
T 3fbt_A 166 FKVISYDELSN-L-KGDVIINCT 186 (282)
T ss_dssp SEEEEHHHHTT-C-CCSEEEECS
T ss_pred cCcccHHHHHh-c-cCCEEEECC
Confidence 1122234444 5 899999875
No 463
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=38.85 E-value=16 Score=35.17 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=69.6
Q ss_pred HHHHHHHHhhhc--c-EEEEeeCCcchH-HHHhhh-CCCcEEeCCCCCCChh--HHHHHHHHHHHHhC-CCCCcEEEEEc
Q 024871 43 TRDAARVLCRYN--D-IIMARVFGHQDI-LDLAKF-ATVPVINGLTDYNHPC--QIMADALTIIEHVG-RLEGTKVVYVG 114 (261)
Q Consensus 43 ~~Dt~~~ls~~~--D-~iv~R~~~~~~~-~~~a~~-~~vPVINa~~~~~HPt--Q~L~Dl~Ti~e~~g-~l~~~~i~~vG 114 (261)
+.+.+..+..-+ . +|=.-.++.... +-+.++ ..+||+| |..|=| =+|+=|+.-.+..| +|+..||++.|
T Consensus 213 vdefv~av~~~fGp~~~I~~EDf~~~~af~il~ryr~~ipvFn---DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~G 289 (555)
T 1gq2_A 213 LDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFN---DDIQGTASVAVAGLLAALRITKNRLSDHTVLFQG 289 (555)
T ss_dssp HHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEE---TTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEC
T ss_pred HHHHHHHHHHhhCCCcEEeecccCCccHHHHHHHHhccCCEec---CccchHHHHHHHHHHHHHHHhCCChhhcEEEEEC
Confidence 444555554432 2 444544443322 222222 2799999 345544 34666776666666 59999999999
Q ss_pred CCC-c--hHHHHHHHHhcCCc-------EEEEeCCCCCC------CCHHHHHHHHHhCCCeEEEEcCHHHHhCC--CCEE
Q 024871 115 DGN-N--IVHSWLLMASVIPF-------HFVCACPKGFE------PDKETVEKARKAGISKIEITNDPKEVVQG--ADVV 176 (261)
Q Consensus 115 d~~-~--v~~S~~~~~~~~g~-------~~~~~~P~~~~------~~~~~~~~~~~~g~~~i~~~~d~~~a~~~--aDvi 176 (261)
-+. . ++.=++......|+ +++++--+|+- +.+....+++... ...++.|++++ +||+
T Consensus 290 AGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~-----~~~~L~eav~~vkp~vl 364 (555)
T 1gq2_A 290 AGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHC-----EMKNLEDIVKDIKPTVL 364 (555)
T ss_dssp CSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCC-----CCCCHHHHHHHHCCSEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcC-----CCCCHHHHHhhcCCCEE
Confidence 862 2 44444443333342 45554333321 2221112222211 13479999995 9999
Q ss_pred EEec
Q 024871 177 YSDV 180 (261)
Q Consensus 177 y~~~ 180 (261)
+-.+
T Consensus 365 IG~S 368 (555)
T 1gq2_A 365 IGVA 368 (555)
T ss_dssp EECS
T ss_pred EEec
Confidence 9875
No 464
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=38.53 E-value=45 Score=27.14 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
+++|+++.+.|..+.+...++..+..-|.+++++.-
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence 478999999998888999999888888999887653
No 465
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=38.35 E-value=65 Score=28.09 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=41.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeC-CCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVI-PFHFVCAC-PKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~-P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.+||+++|- +|+....+..+... +++++.++ +..-. .+ . .| +..++|+++.+.++|+|+.-.
T Consensus 3 ~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~---~~----~-~g---v~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL---DT----K-TP---VFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC---SS----S-SC---EEEGGGGGGTTTTCSEEEECS
T ss_pred CCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHH---hh----c-CC---CceeCCHHHHhcCCCEEEEcC
Confidence 479999994 88888888877665 57766433 32111 00 0 22 556788888778999988653
No 466
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=38.29 E-value=95 Score=25.54 Aligned_cols=103 Identities=9% Similarity=-0.102 Sum_probs=53.5
Q ss_pred hhhHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCCHHHHHHH-HhhhccEEEEeeCCcch---HHHHhhhCCCcEEeCCCC
Q 024871 10 MRTRVSFETGFSLL-GGHAIYLGPDDIQMGKREETRDAARV-LCRYNDIIMARVFGHQD---ILDLAKFATVPVINGLTD 84 (261)
Q Consensus 10 tRTR~SFe~A~~~L-Gg~~~~l~~~~s~~~kgEs~~Dt~~~-ls~~~D~iv~R~~~~~~---~~~~a~~~~vPVINa~~~ 84 (261)
.+-.-.++.++..+ |-.+......... ...+...+.++. +++-+|.|++-...... ..+.+...++|||..+..
T Consensus 25 ~~~~~gi~~~a~~~~g~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 103 (304)
T 3gbv_A 25 TDVQKGIREAVTTYSDFNISANITHYDP-YDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQ 103 (304)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEEEEEECS-SCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEEcCCC-CCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34566789999999 7676654211000 111222333443 35558999987654432 233345568998875432
Q ss_pred CC----C------hhHHHHHHHHHHHHhCCCCCcEEEEEc
Q 024871 85 YN----H------PCQIMADALTIIEHVGRLEGTKVVYVG 114 (261)
Q Consensus 85 ~~----H------PtQ~L~Dl~Ti~e~~g~l~~~~i~~vG 114 (261)
.. . ..++--.+....-..|. .+.+|++++
T Consensus 104 ~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~-~~~~i~~i~ 142 (304)
T 3gbv_A 104 IKDAPPLAFFGQNSHQSGYFAARMLMLLAV-NDREIVIFR 142 (304)
T ss_dssp CTTSCCSEEEECCHHHHHHHHHHHHHHHST-TCSEEEEEE
T ss_pred CCCCCceEEEecChHHHHHHHHHHHHHHhC-CCCeEEEEE
Confidence 21 1 12333223222223332 458999995
No 467
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.30A {Bordetella pertussis}
Probab=38.28 E-value=33 Score=27.36 Aligned_cols=73 Identities=14% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCcEEEEEcC--CCchHHHHHHHHhcCCc-EEEEeCCCCCC--CCHHHHHHHHHhCC----CeEEEEcCHHHHhCCCCE
Q 024871 105 LEGTKVVYVGD--GNNIVHSWLLMASVIPF-HFVCACPKGFE--PDKETVEKARKAGI----SKIEITNDPKEVVQGADV 175 (261)
Q Consensus 105 l~~~~i~~vGd--~~~v~~S~~~~~~~~g~-~~~~~~P~~~~--~~~~~~~~~~~~g~----~~i~~~~d~~~a~~~aDv 175 (261)
+.++.|+..+- +.|+ -+.+..|..||+ .++++.|.... +.++.++.+ .|. ..+++.+++++++++...
T Consensus 8 ~~~~~vvL~~~~dp~N~-Gai~Rta~a~G~~~l~lv~~~~~d~~~~~~~~r~a--~Ga~~~l~~~~~~~~l~~~l~~~~~ 84 (173)
T 3kty_A 8 FSRVRFIMTQPSHPGNV-GSAARAIKTMGFGELVLVAPRFPDMTAQPEAVALA--SGALDVLERAAVHDTLEEALAPVTL 84 (173)
T ss_dssp HTTEEEEEESCCCHHHH-HHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHH--TTCHHHHHTCEEESCHHHHHTTCSE
T ss_pred hCCeEEEEeCCCCCCcH-HHHHHHHHHcCCCEEEEeCCCccccCCCHHHHHHc--CCHHHhhchheecCCHHHHHHhCCe
Confidence 45678888884 3454 467788889997 78888898775 456555432 231 224567899999999987
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
+|.+.
T Consensus 85 v~~t~ 89 (173)
T 3kty_A 85 AFALT 89 (173)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77653
No 468
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=38.10 E-value=1.7e+02 Score=24.92 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=47.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE----cCHHHHhC-----CCCE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEIT----NDPKEVVQ-----GADV 175 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~----~d~~~a~~-----~aDv 175 (261)
-.|.+|.+.|..+.+....+..+...|.+++.+.. .++-++.+++.|.. ..+. ++..+.++ +.|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-----~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-----SDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES-----SHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeE
Confidence 46899999998788999999999999998877654 23445566666642 2221 33434332 5788
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
++-..
T Consensus 218 vi~~~ 222 (333)
T 1v3u_A 218 YFDNV 222 (333)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 87654
No 469
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=37.80 E-value=1e+02 Score=23.28 Aligned_cols=85 Identities=12% Similarity=0.135 Sum_probs=50.9
Q ss_pred hHHHHhhhCCCcEEeCCCCCC------ChhHHHHHHHHHHHHhCCCCCcEEEEE-cCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 66 DILDLAKFATVPVINGLTDYN------HPCQIMADALTIIEHVGRLEGTKVVYV-GDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 66 ~~~~~a~~~~vPVINa~~~~~------HPtQ~L~Dl~Ti~e~~g~l~~~~i~~v-Gd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.+.++++..+.-|+++..... =|.-.+.+++...+. -+| .+.++ ||.. .+++.++...+...++.
T Consensus 9 tv~~i~~~l~~~vl~g~~~~~~i~~i~~~a~~~~~~~~~~~~---~~~-~l~I~~G~r~---~~~l~a~~~~~~~~iIl- 80 (139)
T 2ioj_A 9 SVEEIREAVSGEYLIEPREEKMVEQVVIGAMSPQSALRYLRE---ARN-AALVTGGDRS---DLLLTALEMPNVRCLIL- 80 (139)
T ss_dssp EHHHHHHHTTCEEEECCSSCCEECEEEECSSCHHHHHHHHHT---CSS-EEEEEETTCH---HHHHHHTTCTTEEEEEE-
T ss_pred CHHHHHHHcCCEEEEcCCCCeEEeeEEEEeCCHHHHHHHHhc---CCC-EEEEEcCCHH---HHHHHHHhCCCCcEEEE-
Confidence 467778888888888632211 122234444433322 122 78888 8843 33333333356655555
Q ss_pred CCCCCCCHHHHHHHHHhCCC
Q 024871 139 PKGFEPDKETVEKARKAGIS 158 (261)
Q Consensus 139 P~~~~~~~~~~~~~~~~g~~ 158 (261)
..++.|++++++.|+++|..
T Consensus 81 t~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 81 TGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp ETTCCCCHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHHHCCCe
Confidence 45899999999999998864
No 470
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=37.57 E-value=54 Score=28.62 Aligned_cols=70 Identities=20% Similarity=0.197 Sum_probs=48.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--cCHHHHh------CCCCE
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEIT--NDPKEVV------QGADV 175 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~--~d~~~a~------~~aDv 175 (261)
+.|.+|++.|. +.+.+..+.++..+|. +++.+... ++-++.+++.|...+.-. ++..+.+ +++|+
T Consensus 166 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 166 ISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS-----DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC-----HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 48899999998 8899999999998998 77766542 445567777874322211 2333333 25898
Q ss_pred EEEec
Q 024871 176 VYSDV 180 (261)
Q Consensus 176 iy~~~ 180 (261)
++-..
T Consensus 240 vid~~ 244 (348)
T 2d8a_A 240 FLEFS 244 (348)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 88654
No 471
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=37.33 E-value=1.6e+02 Score=24.31 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHhcCCeEEEe-CCCCcCCCCCCCHHHHHH-HHhhhccEEEEeeCCcc---hHHHHhhhCCCcEEeCC
Q 024871 11 RTRVSFETGFSLLGGHAIYL-GPDDIQMGKREETRDAAR-VLCRYNDIIMARVFGHQ---DILDLAKFATVPVINGL 82 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l-~~~~s~~~kgEs~~Dt~~-~ls~~~D~iv~R~~~~~---~~~~~a~~~~vPVINa~ 82 (261)
+-.-.++.++..+|.+++.+ +... ..+.....++ .+++-+|.|++-..... ...+.+...++|||-.+
T Consensus 21 ~~~~gi~~~a~~~g~~~~~~~~~~~----~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 21 RCLKGFEDAAQALNVTVEYRGAAQY----DIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSS----CHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcC----CHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 34567889999999999874 3221 1122223333 34455899888654333 23333456789988754
No 472
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=37.14 E-value=1.3e+02 Score=26.26 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=46.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE----cCHHHHhC-----CCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEIT----NDPKEVVQ-----GAD 174 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~----~d~~~a~~-----~aD 174 (261)
-.|.+|++.| .+.+.+..+.++..+|. +++.+... ++-++.+++.|...+.-. ++..+.++ ++|
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 194 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDIN-----GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC-----HHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCcc
Confidence 3678999999 47899999999999998 77766543 233566778885322211 23444332 689
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+|+-..
T Consensus 268 vvid~~ 273 (376)
T 1e3i_A 268 YSLDCA 273 (376)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 888653
No 473
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=37.05 E-value=1e+02 Score=29.02 Aligned_cols=63 Identities=8% Similarity=0.005 Sum_probs=47.3
Q ss_pred HHHHHHHHhCC---CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHH-hC
Q 024871 94 DALTIIEHVGR---LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARK-AG 156 (261)
Q Consensus 94 Dl~Ti~e~~g~---l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~g 156 (261)
=|+.++|+|+. |+|.||+-+=-..--.--+++.+...|.++..++.+-|...++...-..+ .|
T Consensus 30 ~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stqd~~aaal~~~~g 96 (479)
T 1v8b_A 30 GLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTADYAAAAVSTLEN 96 (479)
T ss_dssp HHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHTTSTT
T ss_pred HHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCchHHHHHHHhhcCC
Confidence 47889999863 99999886655444344578888889999999998888888877654444 45
No 474
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=36.89 E-value=1.9e+02 Score=24.33 Aligned_cols=164 Identities=12% Similarity=0.006 Sum_probs=92.1
Q ss_pred eccCC--ChhhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHHhhh-ccEEEEeeCCcchHHHH-------hhh
Q 024871 4 IFAKP--SMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILDL-------AKF 73 (261)
Q Consensus 4 lF~~~--StRTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~ls~~-~D~iv~R~~~~~~~~~~-------a~~ 73 (261)
+|-+| ..+.-.=+..++..+|....+..-. + ..|.+.+.++.+... .+.+-+=.+-...+..+ |+.
T Consensus 6 viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~---~-~~~~l~~~i~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~ 81 (272)
T 1p77_A 6 VWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKL---G-DLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKL 81 (272)
T ss_dssp EEESSCTTCCHHHHHHHHHHHTTCCEEEEEEE---C-CTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred EECCCcccccCHHHHHHHHHHCCcCeEEEEEE---c-CHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHHhhcCHHHHH
Confidence 34444 3455566888999999987775332 1 147788888877643 46666665543333322 222
Q ss_pred --CCCcEEe-CC----CCCCChhHHHHHHHHHHHHhCCCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCH
Q 024871 74 --ATVPVIN-GL----TDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDK 146 (261)
Q Consensus 74 --~~vPVIN-a~----~~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~ 146 (261)
+-=+|++ -. |++.-+ ..+.. .+++....+++++++++|- +.+..+.+..+...|.+++++.-.. +
T Consensus 82 igavNti~~~~~g~l~g~NTD~-~G~~~--~L~~~~~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~----~ 153 (272)
T 1p77_A 82 AEACNTLKKLDDGKLYADNTDG-IGLVT--DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF----S 153 (272)
T ss_dssp HTCCSEEEECTTSCEEEECCHH-HHHHH--HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH----H
T ss_pred hCCceEEEEccCCEEEEecCCH-HHHHH--HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH----H
Confidence 1124554 22 222222 23322 2333223689999999996 6788888888888888888775321 1
Q ss_pred HHHHHHHHhCC-CeEEEEcCHHHHhC-CCCEEEEec
Q 024871 147 ETVEKARKAGI-SKIEITNDPKEVVQ-GADVVYSDV 180 (261)
Q Consensus 147 ~~~~~~~~~g~-~~i~~~~d~~~a~~-~aDviy~~~ 180 (261)
...+.+++.+. ..+... ++++..+ ++|+|+...
T Consensus 154 ~a~~l~~~~~~~~~~~~~-~~~~~~~~~~DivIn~t 188 (272)
T 1p77_A 154 KTKELAERFQPYGNIQAV-SMDSIPLQTYDLVINAT 188 (272)
T ss_dssp HHHHHHHHHGGGSCEEEE-EGGGCCCSCCSEEEECC
T ss_pred HHHHHHHHccccCCeEEe-eHHHhccCCCCEEEECC
Confidence 11122223221 123332 4444334 899999975
No 475
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=36.87 E-value=48 Score=29.13 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=38.7
Q ss_pred cEEEEEcC-CCchHHHHHHHHhcCCcEEEEeCCCCCC-----CC----HHHHHHHHHhCCCeEEEEc
Q 024871 108 TKVVYVGD-GNNIVHSWLLMASVIPFHFVCACPKGFE-----PD----KETVEKARKAGISKIEITN 164 (261)
Q Consensus 108 ~~i~~vGd-~~~v~~S~~~~~~~~g~~~~~~~P~~~~-----~~----~~~~~~~~~~g~~~i~~~~ 164 (261)
.+|+-+|. .+|...+++.+++.+|++.+++-|+.-. +. ..-++.++.+| +.+..++
T Consensus 68 ~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~G-A~v~~~~ 133 (341)
T 1f2d_A 68 THLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMG-ADVRVIE 133 (341)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTT-CEEEECC
T ss_pred CEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCC-CEEEEeC
Confidence 35555554 5899999999999999998888887654 11 22445677788 5666543
No 476
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.83 E-value=1.5e+02 Score=24.85 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=31.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
+++|+++.+.|....+...++..+..-|.++++++-
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAK 41 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 378999999998888999999988888999887764
No 477
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=36.64 E-value=27 Score=29.05 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=30.9
Q ss_pred CCCCcEEEEEcCC--CchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDG--NNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~--~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
+++|+++.+.|.. ..+...++..+..-|.++++++-
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~ 54 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYA 54 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBS
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeC
Confidence 4889999999987 68999999988888999887754
No 478
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=36.58 E-value=48 Score=27.79 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=43.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCC-CCCCH-HH---HHHHHHhCCCeEEEE-----cCHHHHhCCCCEE
Q 024871 107 GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKG-FEPDK-ET---VEKARKAGISKIEIT-----NDPKEVVQGADVV 176 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~-~~~~~-~~---~~~~~~~g~~~i~~~-----~d~~~a~~~aDvi 176 (261)
+++|++.|..+.+..+++..+..-|.+++...-+. -...+ +- ++.....|. .+... +++.++++++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v-~~v~~D~~d~~~l~~~~~~~d~v 80 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGV-ILLEGDINDHETLVKAIKQVDIV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTC-EEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCC-EEEEeCCCCHHHHHHHHhCCCEE
Confidence 57899999888888888877666677666554221 11111 11 112223342 22211 2346789999999
Q ss_pred EEecc
Q 024871 177 YSDVW 181 (261)
Q Consensus 177 y~~~w 181 (261)
+....
T Consensus 81 i~~a~ 85 (307)
T 2gas_A 81 ICAAG 85 (307)
T ss_dssp EECSS
T ss_pred EECCc
Confidence 98754
No 479
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=36.54 E-value=80 Score=29.40 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=45.6
Q ss_pred CcEEEEEcCCCchHHH-HHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEec
Q 024871 107 GTKVVYVGDGNNIVHS-WLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSDV 180 (261)
Q Consensus 107 ~~~i~~vGd~~~v~~S-~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~~ 180 (261)
.++|.++|= +.+..| ++..+...|.+|...--. .. ...+.+++.|+ .+..-++.+ -+.++|+|+..+
T Consensus 22 ~~~v~viGi-G~sG~s~~A~~l~~~G~~V~~~D~~---~~-~~~~~l~~~gi-~~~~g~~~~-~~~~~d~vV~Sp 89 (494)
T 4hv4_A 22 VRHIHFVGI-GGAGMGGIAEVLANEGYQISGSDLA---PN-SVTQHLTALGA-QIYFHHRPE-NVLDASVVVVST 89 (494)
T ss_dssp CCEEEEETT-TSTTHHHHHHHHHHTTCEEEEECSS---CC-HHHHHHHHTTC-EEESSCCGG-GGTTCSEEEECT
T ss_pred CCEEEEEEE-cHhhHHHHHHHHHhCCCeEEEEECC---CC-HHHHHHHHCCC-EEECCCCHH-HcCCCCEEEECC
Confidence 579999994 556665 788888999998866322 22 23455677774 555445644 478899888764
No 480
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=36.50 E-value=2e+02 Score=24.58 Aligned_cols=114 Identities=12% Similarity=-0.001 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHhcCCe----EEEeCCCCcCCCCCCCHHHHHHH----Hh-hhccEEEEeeCCcc---hHHHHhhhCCCcE
Q 024871 11 RTRVSFETGFSLLGGH----AIYLGPDDIQMGKREETRDAARV----LC-RYNDIIMARVFGHQ---DILDLAKFATVPV 78 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~----~~~l~~~~s~~~kgEs~~Dt~~~----ls-~~~D~iv~R~~~~~---~~~~~a~~~~vPV 78 (261)
..+..++.|+.+.+|. .+.+-..+. +-+....... ++ .-+|+|+- ..... .+..+++..++|+
T Consensus 26 ~~~~g~~~a~~~i~ggi~G~~i~l~~~D~----~~~~~~a~~~~~~li~~~~v~~iiG-~~~s~~~~a~~~~~~~~~ip~ 100 (379)
T 3n0w_A 26 GSVAAVQLAIEDVGGKALGQPVKLVSADY----QMKTDVALSIAREWFDRDGVDAIFD-VVNSGTALAINNLVKDKKKLA 100 (379)
T ss_dssp HHHHHHHHHHHHTTTEETTEECEEEEEEC----TTCHHHHHHHHHHHHHHSCCCEEEE-CCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEEeCC----CCCHHHHHHHHHHHHHhCCceEEEc-CCCcHHHHHHHHHHHHcCceE
Confidence 4678899999998743 222211111 1122333332 33 23566654 22222 3456667789999
Q ss_pred EeCC-C--CCC----C-------h--h---HHHHHHHHHHHHhCCCCCcEEEEEcCCCc----hHHHHHHHHhcCCcEEE
Q 024871 79 INGL-T--DYN----H-------P--C---QIMADALTIIEHVGRLEGTKVVYVGDGNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 79 INa~-~--~~~----H-------P--t---Q~L~Dl~Ti~e~~g~l~~~~i~~vGd~~~----v~~S~~~~~~~~g~~~~ 135 (261)
|+.. + ... + | . +++++. ..++ ..+||+++.+... ....+...+...|.+++
T Consensus 101 i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~---l~~~---g~~~vaii~~~~~~g~~~~~~~~~~~~~~G~~v~ 174 (379)
T 3n0w_A 101 FITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQA---QLAK---GYKTWFLMLPDAAYGDLMNAAIRRELTAGGGQIV 174 (379)
T ss_dssp EECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHH---HHHT---TCCEEEEEEESSHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHH---HHHc---CCcEEEEEecccchhHHHHHHHHHHHHHcCCEEE
Confidence 9842 1 111 1 1 1 233332 2233 3689999986433 34445555666677654
No 481
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=36.44 E-value=66 Score=28.37 Aligned_cols=54 Identities=17% Similarity=0.162 Sum_probs=37.7
Q ss_pred EEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 109 KVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 109 ~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..+..-.+|...+++..++.+|++++++-|++. .++.-++.++..| +.+..++
T Consensus 78 ~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~-~~~~k~~~~~~~G-A~V~~v~ 131 (351)
T 3aey_A 78 QAVACASTGNTAASAAAYAARAGILAIVVLPAGY-VALGKVAQSLVHG-ARIVQVE 131 (351)
T ss_dssp SEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTC-SCHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCC-CCHHHHHHHHHcC-CEEEEEC
Confidence 3334444588999999999999999888888763 3444556677788 4565543
No 482
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=36.37 E-value=56 Score=29.54 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=39.0
Q ss_pred EEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 110 VVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 110 i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
..+.+-.+|...+++.+++.+|++.+++-|++ .++.-++.++..| +.+..++
T Consensus 114 ~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~G-A~Vv~v~ 165 (398)
T 4d9i_A 114 TFATTTDGNHGRGVAWAAQQLGQNAVIYMPKG--SAQERVDAILNLG-AECIVTD 165 (398)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTT--CCHHHHHHHHTTT-CEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC--CCHHHHHHHHHcC-CEEEEEC
Confidence 34445558999999999999999999998976 4455566677788 5666543
No 483
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=36.25 E-value=60 Score=27.84 Aligned_cols=114 Identities=11% Similarity=0.047 Sum_probs=64.5
Q ss_pred HHHHHHHhcCCeEEEeCCCCcCCCCCC-----CHHHHHHHHhhhccEEEEee------CCcchHHHHhhhCCCcEEeCCC
Q 024871 15 SFETGFSLLGGHAIYLGPDDIQMGKRE-----ETRDAARVLCRYNDIIMARV------FGHQDILDLAKFATVPVINGLT 83 (261)
Q Consensus 15 SFe~A~~~LGg~~~~l~~~~s~~~kgE-----s~~Dt~~~ls~~~D~iv~R~------~~~~~~~~~a~~~~vPVINa~~ 83 (261)
+|..|...-|...+..+.+..|..||. .+.+.++.....+.+|-+-+ .+...+....+..++||+- -.
T Consensus 30 ~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLr-KD 108 (251)
T 1i4n_A 30 RFLEVLSGKERVKIIAEFKKASPSAGDINADASLEDFIRMYDELADAISILTEKHYFKGDPAFVRAARNLTCRPILA-KD 108 (251)
T ss_dssp HHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHHCSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEE-EC
T ss_pred CHHHHHhhCCCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHhCCceEEEecccccCCCHHHHHHHHHhCCCCEEE-ee
Confidence 798888654433444444445556665 88889987776665554422 2344567777888999993 22
Q ss_pred CCCChhHHHHHHHHHHHHhCCCCCcEEEEEcC-CC-chHHHHHHHHhcCCcEEEEe
Q 024871 84 DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD-GN-NIVHSWLLMASVIPFHFVCA 137 (261)
Q Consensus 84 ~~~HPtQ~L~Dl~Ti~e~~g~l~~~~i~~vGd-~~-~v~~S~~~~~~~~g~~~~~~ 137 (261)
-..+|.|..- . ...|- --|+.++- .. .....++..+..+|+.+.+.
T Consensus 109 fi~~~~qi~e----a-~~~GA---D~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvE 156 (251)
T 1i4n_A 109 FYIDTVQVKL----A-SSVGA---DAILIIARILTAEQIKEIYEAAEELGMDSLVE 156 (251)
T ss_dssp CCCSTHHHHH----H-HHTTC---SEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCHHHHHH----H-HHcCC---CEEEEecccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 3456666321 1 22231 22333332 22 35666666666667765544
No 484
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=36.23 E-value=1.2e+02 Score=28.73 Aligned_cols=64 Identities=6% Similarity=0.013 Sum_probs=47.7
Q ss_pred HHHHHHHHhC---CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCC
Q 024871 94 DALTIIEHVG---RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGI 157 (261)
Q Consensus 94 Dl~Ti~e~~g---~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~ 157 (261)
=|+.++|+|+ .|+|.||+-+=-..-=..-|++.+...|.++..++-+-|...++...-..+.|+
T Consensus 41 ~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~v~~~~~n~~stqd~~aaa~~~~g~ 107 (488)
T 3ond_A 41 GLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA 107 (488)
T ss_dssp HHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCeEEEecCCCCCCcHHHHHHHHhcCC
Confidence 4788888886 499999887655444344578888899999998887778887777655555674
No 485
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=36.22 E-value=2.1e+02 Score=24.66 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=43.2
Q ss_pred hhccEEEEeeCCcch---HHHHhhhCCCcEEeCCCC-C--CC---------hhHHHHHHHH-HHHHhCCCCCcEEEEEcC
Q 024871 52 RYNDIIMARVFGHQD---ILDLAKFATVPVINGLTD-Y--NH---------PCQIMADALT-IIEHVGRLEGTKVVYVGD 115 (261)
Q Consensus 52 ~~~D~iv~R~~~~~~---~~~~a~~~~vPVINa~~~-~--~H---------PtQ~L~Dl~T-i~e~~g~l~~~~i~~vGd 115 (261)
.-+|+|+. . .... +...++..++|+|...+. . .+ +.+...-+.. +.+.+| .+||+++.+
T Consensus 75 ~~V~~iiG-~-~s~~~~a~~~~~~~~~iP~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g---~~~iaii~~ 149 (391)
T 3eaf_A 75 YGVIAIIG-W-GTADTEKLSDQVDTDKITYISASYSAKLLVKPFNFYPAPDYSTQACSGLAFLASEFG---QGKLALAYD 149 (391)
T ss_dssp TCCSEEEE-C-CHHHHHHHHHHHHHHTCEEEESCCCGGGTTSTTEECSSCCHHHHHHHHHHHHHHHHC---SEEEEEEEC
T ss_pred cCcEEEEE-c-CcHHHHHHHHHHhhcCCeEEecccchhhcCCCcEEEeCCCHHHHHHHHHHHHHHhcC---CCEEEEEEe
Confidence 34788887 4 3332 345556779999985321 0 11 2222222222 233343 689999987
Q ss_pred -CCc----hHHHHHHHHhcCCcEEE
Q 024871 116 -GNN----IVHSWLLMASVIPFHFV 135 (261)
Q Consensus 116 -~~~----v~~S~~~~~~~~g~~~~ 135 (261)
... ....+...+...|.+++
T Consensus 150 ~~~~~g~~~~~~~~~~l~~~G~~v~ 174 (391)
T 3eaf_A 150 SKVAYSRSPIGAIKKAAPSLGLQVV 174 (391)
T ss_dssp TTCHHHHTTHHHHHHHTGGGTEEEE
T ss_pred cCChhHHHHHHHHHHHHHHcCCcee
Confidence 332 34455566677787765
No 486
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=36.20 E-value=49 Score=27.83 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACP 139 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P 139 (261)
.++|+++.+.|..+.+...++..+..-|.++++++-
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 61 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999999998888999999888888999887653
No 487
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=36.18 E-value=96 Score=28.65 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=41.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh------------------CCCeEEEEcCHH
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA------------------GISKIEITNDPK 167 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~------------------g~~~i~~~~d~~ 167 (261)
.|-|+.++| .+.+.-.++..++..|.++++.. .+++.++.+++. . +.+..+.|
T Consensus 10 ~~~~~~ViG-lGyvGlp~A~~La~~G~~V~~~D-----~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~-g~l~~ttd-- 80 (431)
T 3ojo_A 10 HGSKLTVVG-LGYIGLPTSIMFAKHGVDVLGVD-----INQQTIDKLQNGQISIEEPGLQEVYEEVLSS-GKLKVSTT-- 80 (431)
T ss_dssp --CEEEEEC-CSTTHHHHHHHHHHTTCEEEEEC-----SCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT-TCEEEESS--
T ss_pred cCCccEEEe-eCHHHHHHHHHHHHCCCEEEEEE-----CCHHHHHHHHCCCCCcCCCCHHHHHHhhccc-CceEEeCc--
Confidence 578999999 47788788777778898887654 233333322221 1 35777777
Q ss_pred HHhCCCCEEEEec
Q 024871 168 EVVQGADVVYSDV 180 (261)
Q Consensus 168 ~a~~~aDviy~~~ 180 (261)
+++||+|++-.
T Consensus 81 --~~~aDvvii~V 91 (431)
T 3ojo_A 81 --PEASDVFIIAV 91 (431)
T ss_dssp --CCCCSEEEECC
T ss_pred --hhhCCEEEEEe
Confidence 46899988853
No 488
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=35.98 E-value=1.3e+02 Score=26.58 Aligned_cols=70 Identities=14% Similarity=0.228 Sum_probs=47.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCC-cEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc-----CHHHHh------CC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIP-FHFVCACPKGFEPDKETVEKARKAGISKIEITN-----DPKEVV------QG 172 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g-~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~-----d~~~a~------~~ 172 (261)
-.|.+|++.| .+.+....+.++..+| .+++.+++. ++-++.+++.|...+.-.. +..+.+ ++
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGS-----PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESC-----HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCC-----HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCC
Confidence 3578999999 7889999999999999 488777643 4556778888853332221 222222 25
Q ss_pred CCEEEEec
Q 024871 173 ADVVYSDV 180 (261)
Q Consensus 173 aDviy~~~ 180 (261)
+|+|+-..
T Consensus 268 ~Dvvid~~ 275 (380)
T 1vj0_A 268 ADFILEAT 275 (380)
T ss_dssp EEEEEECS
T ss_pred CcEEEECC
Confidence 78888654
No 489
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=35.96 E-value=66 Score=26.72 Aligned_cols=75 Identities=12% Similarity=0.093 Sum_probs=46.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-EcC------HHHHhC-----
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI-TND------PKEVVQ----- 171 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~-~~d------~~~a~~----- 171 (261)
+++|+++.+.|..+.+...++..+..-|.++++++-.. ...+...+..++.+ ..+.. .-| ++++++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH-PADEKAEHLQKTYG-VHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS-CCHHHHHHHHHHHC-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcC-CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 47899999999888899998888777798888765322 11223333334444 23332 122 234444
Q ss_pred --CCCEEEEec
Q 024871 172 --GADVVYSDV 180 (261)
Q Consensus 172 --~aDviy~~~ 180 (261)
..|+|+...
T Consensus 109 ~g~id~li~~A 119 (279)
T 3ctm_A 109 FGTIDVFVANA 119 (279)
T ss_dssp HSCCSEEEECG
T ss_pred hCCCCEEEECC
Confidence 489998864
No 490
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=35.93 E-value=85 Score=25.88 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHHH-hhhccEEEEeeCC-cchHHHHhhhCCCcEEeCCCCCCCh
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFG-HQDILDLAKFATVPVINGLTDYNHP 88 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~l-s~~~D~iv~R~~~-~~~~~~~a~~~~vPVINa~~~~~HP 88 (261)
+-...++.++.++|.+++.++... ..+...+..+.+ ++-+|.|++-... .....+..+..++|||-.+.....|
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~ 100 (291)
T 3egc_A 25 EVASGVESEARHKGYSVLLANTAE----DIVREREAVGQFFERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIP 100 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEECCCSSCCHHHHHSSCTTSCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC----CHHHHHHHHHHHHHCCCCEEEEeCCCCChHHHHHhhccCCCEEEEecccCCC
Confidence 446678899999999988775432 122223344433 4458988875543 3344455566799988754322211
Q ss_pred --hHHHHHHH----HHHHHhCCCCCcEEEEEcCC
Q 024871 89 --CQIMADAL----TIIEHVGRLEGTKVVYVGDG 116 (261)
Q Consensus 89 --tQ~L~Dl~----Ti~e~~g~l~~~~i~~vGd~ 116 (261)
..+..|-+ .+-+++-.....+|++++..
T Consensus 101 ~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~ 134 (291)
T 3egc_A 101 GCGAVLSENVRGARTAVEYLIARGHTRIGAIVGS 134 (291)
T ss_dssp TCEEEEECHHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CCCEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 11112211 11222222235789999864
No 491
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=35.92 E-value=71 Score=26.74 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=30.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeC
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCAC 138 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~ 138 (261)
.++|+++.+.|..+.+...++..+..-|.++++..
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~ 59 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNY 59 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 48899999999888899999998888899987754
No 492
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=35.88 E-value=1.1e+02 Score=27.09 Aligned_cols=62 Identities=19% Similarity=0.233 Sum_probs=43.1
Q ss_pred HHhCCCC-CcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 100 EHVGRLE-GTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 100 e~~g~l~-~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..|.+. |.+..+..-.+|...|++..++.+|++.+++-|+.- ++.-++.++.+| +.+..++
T Consensus 78 ~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~--~~~k~~~~~~~G-A~Vv~v~ 140 (344)
T 3vc3_A 78 EEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYT--SLERRVTMRAFG-AELILTD 140 (344)
T ss_dssp HHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTS--CHHHHHHHHHTT-CEEEEEC
T ss_pred HHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCC--hHHHHHHHHHcC-CEEEEEC
Confidence 3445544 343333444589999999999999999999989753 444556677888 5776653
No 493
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=35.68 E-value=98 Score=26.40 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEEEe
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDPKEVVQGADVVYSD 179 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy~~ 179 (261)
-.|.+|++.|. +.+.+..+.++..+|.+++.++ ..- -.+.+++.|. ...+ +|.++.-+++|+++-.
T Consensus 141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~-----~~~~~~~lGa-~~v~-~d~~~v~~g~Dvv~d~ 206 (315)
T 3goh_A 141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASL-----SQALAAKRGV-RHLY-REPSQVTQKYFAIFDA 206 (315)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSC-----CHHHHHHHTE-EEEE-SSGGGCCSCEEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-Chh-----hHHHHHHcCC-CEEE-cCHHHhCCCccEEEEC
Confidence 46899999999 8899999999988999887776 322 2356778884 3323 4522223567887754
No 494
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=35.47 E-value=1.7e+02 Score=23.95 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhcCCeEEEeCCCCcCCCCCCCHHHHHHH-HhhhccEEEEeeCCc-c-hHHHHhhhCCCcEEeCCCCCCC
Q 024871 11 RTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARV-LCRYNDIIMARVFGH-Q-DILDLAKFATVPVINGLTDYNH 87 (261)
Q Consensus 11 RTR~SFe~A~~~LGg~~~~l~~~~s~~~kgEs~~Dt~~~-ls~~~D~iv~R~~~~-~-~~~~~a~~~~vPVINa~~~~~H 87 (261)
+-.-.++.++..+|.+++..+... ..+...+.++. +++-+|.|++-.... . .+.+..+..++|||-.+.....
T Consensus 37 ~~~~gi~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~ 112 (293)
T 2iks_A 37 RIANYLERQARQRGYQLLIACSED----QPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDR 112 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESCCCT
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC----CHHHHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCccCc
Confidence 344577888999999987764321 11222233433 345589888854332 1 2323345578998764332111
Q ss_pred h--hHHHHH----HHHHHHHhCCCCCcEEEEEcCC-Cc-hH----HHHHHHHhcCCc
Q 024871 88 P--CQIMAD----ALTIIEHVGRLEGTKVVYVGDG-NN-IV----HSWLLMASVIPF 132 (261)
Q Consensus 88 P--tQ~L~D----l~Ti~e~~g~l~~~~i~~vGd~-~~-v~----~S~~~~~~~~g~ 132 (261)
+ ..+..| ...+-+++-..-..+|++++.. .. .. ..+...+...|.
T Consensus 113 ~~~~~V~~d~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~ 169 (293)
T 2iks_A 113 EHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPR 169 (293)
T ss_dssp TTCEEEEECHHHHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCEEEecCHHHHHHHHHHHHHCCCCEEEEEecCcccccHHHHHHHHHHHHHHcCC
Confidence 1 111112 1122233323334789999754 22 22 224445555665
No 495
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=35.32 E-value=1.4e+02 Score=26.19 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=46.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHhcCCc-EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE----cCHHHHhC-----CCC
Q 024871 105 LEGTKVVYVGDGNNIVHSWLLMASVIPF-HFVCACPKGFEPDKETVEKARKAGISKIEIT----NDPKEVVQ-----GAD 174 (261)
Q Consensus 105 l~~~~i~~vGd~~~v~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~----~d~~~a~~-----~aD 174 (261)
-.|.+|++.| .+.+.+..+.++..+|. +++.+... ++-++.+++.|...+.-. ++..+.++ ++|
T Consensus 191 ~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~-----~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 191 EPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLN-----PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC-----HHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCC
Confidence 4678999999 48899999999999998 77766543 233466778874322111 23444443 589
Q ss_pred EEEEec
Q 024871 175 VVYSDV 180 (261)
Q Consensus 175 viy~~~ 180 (261)
+++-..
T Consensus 265 ~vid~~ 270 (374)
T 1cdo_A 265 FSLECV 270 (374)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 888654
No 496
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=35.29 E-value=58 Score=30.20 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=43.5
Q ss_pred HHhCCCC-C-cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEc
Q 024871 100 EHVGRLE-G-TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITN 164 (261)
Q Consensus 100 e~~g~l~-~-~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~ 164 (261)
+..|.++ | .+|+-.+ .+|...+++.+++.+|++.+++-|++ .++.-++.++.+| +.+..++
T Consensus 166 ~~~G~l~~g~~~VV~aS-sGNhG~AlA~aAa~~Gl~~~IvmP~~--~s~~k~~~~r~~G-AeVv~v~ 228 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPT-SGNTGIGLAFIAASRGYRLILTMPAS--MSMERRVLLKAFG-AELVLTD 228 (430)
T ss_dssp HHTTSCCTTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTT-CEEEEEC
T ss_pred HHcCCCCCCCcEEEEEC-CCHHHHHHHHHHHHhCCEEEEEEcCC--CCHHHHHHHHHCC-CEEEEEC
Confidence 3455543 3 3344434 48999999999999999999888987 4455566777888 5777764
No 497
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=35.27 E-value=1.8e+02 Score=27.36 Aligned_cols=62 Identities=6% Similarity=0.001 Sum_probs=46.6
Q ss_pred HHHHHHHHhC---CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHh
Q 024871 94 DALTIIEHVG---RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKA 155 (261)
Q Consensus 94 Dl~Ti~e~~g---~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~ 155 (261)
=|+.++|+|+ .|+|.||+-+=-..--.--+++.+...|.++..++.+-|...++...-+.+.
T Consensus 44 ~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~stqd~~aaa~~~~ 108 (494)
T 3ce6_A 44 GLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVG 108 (494)
T ss_dssp HHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHC
T ss_pred HHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCCCchHHHHHHHhhh
Confidence 4778889886 3999998865544433344788888899999999988888888776554445
No 498
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=35.26 E-value=32 Score=30.22 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHhcC-CcEEEEeC-CCCC-CCCHHHHHHHHHhCCCeEEEEcCHHHHhCCCCEEE
Q 024871 106 EGTKVVYVGDGNNIVHSWLLMASVI-PFHFVCAC-PKGF-EPDKETVEKARKAGISKIEITNDPKEVVQGADVVY 177 (261)
Q Consensus 106 ~~~~i~~vGd~~~v~~S~~~~~~~~-g~~~~~~~-P~~~-~~~~~~~~~~~~~g~~~i~~~~d~~~a~~~aDviy 177 (261)
..+||+++|-.+++.+-++.....- +++++-+. +++- ....+.-+.+ ..+...+.+++|+++.++++|||+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~-G~~~~gv~v~~dl~~ll~~aDVvI 93 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILI-GSDFLGVRITDDPESAFSNTEGIL 93 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGT-TCSCCSCBCBSCHHHHTTSCSEEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhh-ccCcCCceeeCCHHHHhcCCCEEE
Confidence 3479999998899999998876544 67877553 2110 0100000000 001123567899999999999986
No 499
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.22 E-value=1.2e+02 Score=25.78 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=50.7
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEcCH------HHHh--CCCCE
Q 024871 104 RLEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEITNDP------KEVV--QGADV 175 (261)
Q Consensus 104 ~l~~~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~~~d~------~~a~--~~aDv 175 (261)
+|+||++.+.|-...+....++.++.-|.+++++.-+ ..++..+.+++.|.....+.-|+ ++++ -..|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~---~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR---APDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCC---cHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 6999999999988889999999999999999887532 34566677777764323333332 1222 23688
Q ss_pred EEEe
Q 024871 176 VYSD 179 (261)
Q Consensus 176 iy~~ 179 (261)
++.-
T Consensus 83 LVNN 86 (247)
T 4hp8_A 83 LVNN 86 (247)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8874
No 500
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=35.18 E-value=62 Score=28.61 Aligned_cols=68 Identities=21% Similarity=0.310 Sum_probs=40.2
Q ss_pred CCC--cEEEEEcCCCchHHHHHHHHhcCCcEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE----EcCHHHHhCCCCEEEE
Q 024871 105 LEG--TKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDKETVEKARKAGISKIEI----TNDPKEVVQGADVVYS 178 (261)
Q Consensus 105 l~~--~~i~~vGd~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~i~~----~~d~~~a~~~aDviy~ 178 (261)
++| +||+++|- ++|....+..++. ..+++++. ...+.++.+++.. ..+.+ .+++.+.++++|+|+.
T Consensus 12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~-----~~~~~~~~~~~~~-~~~~~d~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGD-----VNNENLEKVKEFA-TPLKVDASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEE-----SCHHHHHHHTTTS-EEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEE-----cCHHHHHHHhccC-CcEEEecCCHHHHHHHHhCCCEEEE
Confidence 555 58999997 8888887776655 34565553 2333344444432 22322 1235678899999998
Q ss_pred ec
Q 024871 179 DV 180 (261)
Q Consensus 179 ~~ 180 (261)
..
T Consensus 84 ~~ 85 (365)
T 3abi_A 84 AL 85 (365)
T ss_dssp CC
T ss_pred ec
Confidence 65
Done!