BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024872
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IF99|LPXB_ARATH Probable lipid-A-disaccharide synthase, mitochondrial
OS=Arabidopsis thaliana GN=LPXB PE=2 SV=1
Length = 460
Score = 357 bits (915), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/257 (67%), Positives = 206/257 (80%), Gaps = 4/257 (1%)
Query: 5 ARYSHERL-NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAA 63
ARY +RL N HFHYVAPSFWAWKGGE+RL L+ FVDH+ CILPNEE +CR +G+ A
Sbjct: 146 ARYKQQRLENCSVHFHYVAPSFWAWKGGESRLGGLSEFVDHLFCILPNEERVCREHGVEA 205
Query: 64 TFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 123
TFVGHPV+ED E +L + +P ELK+EG S +++S+PS +TVIS+LPGSRLQEV R
Sbjct: 206 TFVGHPVLEDASEFDLVRRCKPQELKLEGLS---FSEHSIPSDSTVISVLPGSRLQEVER 262
Query: 124 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 183
MLPIF+K ++LLKD FP+L+T+IHVA N V++YI +WPVP+ILVP GS+ LKYDA
Sbjct: 263 MLPIFSKAMKLLKDPFPKLVTLIHVASNNQVDHYIGESFSEWPVPAILVPSGSTQLKYDA 322
Query: 184 FSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPII 243
F AS+ ALCTSGTVAVELQLA LP +VAYRAHFLTE IRYKAKIPYISLPNILLDSPII
Sbjct: 323 FGASQAALCTSGTVAVELQLAHLPSLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPII 382
Query: 244 PEALLQACTPDTLTHLL 260
PEAL QAC P L +L
Sbjct: 383 PEALFQACNPSNLASIL 399
>sp|B6IST7|LPXB_RHOCS Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain
ATCC 51521 / SW) GN=lpxB PE=3 SV=1
Length = 401
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 20/239 (8%)
Query: 18 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 77
HYVAP+ WAW+ G AR +A F+DH+L +LP E GL TFVGHPVVE +
Sbjct: 118 IHYVAPTVWAWRPGRAR--KVAKFLDHLLALLPFEPPYFEAVGLPCTFVGHPVVESGAD- 174
Query: 78 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 137
G+ E F+ ++ + ATV+++LPGSR EV ++LP F T+E+L
Sbjct: 175 -------------AGDGERFRRRHGIAPDATVLTVLPGSRRSEVTKLLPDFGATLEILAS 221
Query: 138 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 197
+P+L V+ P V + +Q WPVP+I + G + KYDAF+AS AL SGTV
Sbjct: 222 RYPDLQVVVPTVPG--VAETVAEAVQSWPVPAITLLGDAD--KYDAFAASTAALAASGTV 277
Query: 198 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
A+EL LAR+P V+AYR H ++ R ++ Y++L NI+LD P++PE L Q CTPD L
Sbjct: 278 ALELALARVPAVIAYRIHPVSHALYRRFIRVRYVNLVNIMLDRPLVPELLQQDCTPDRL 336
>sp|Q5FUA3|LPXB_GLUOX Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain
621H) GN=lpxB PE=3 SV=1
Length = 415
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 138/247 (55%), Gaps = 22/247 (8%)
Query: 13 NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 72
+G HYVAP WAW+ E R+K D +LC+LP E GL FVGHPV++
Sbjct: 135 SGIKRVHYVAPQVWAWR--ENRVKEFPGLWDRLLCLLPFEPDWFAQRGLEGRFVGHPVLQ 192
Query: 73 DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 132
+ +GN++ F+ ++++P+ A V+ L+PGSR E R+LP+F K +
Sbjct: 193 SGVR--------------QGNAQRFRLRHNIPAHAPVVILMPGSRRSEAPRLLPVFRKML 238
Query: 133 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGSSNLKYDAFSASRVAL 191
++L+ +P++ VI VAP + I LI+KWP+ P I+ + K+DAF+A++ AL
Sbjct: 239 DILRVQYPDICPVIPVAPV--IAPTIRQLIRKWPIQPHIVT---DIHDKHDAFAAAQCAL 293
Query: 192 CTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQAC 251
SGT +EL + +P V YR + +T R K+P++++ N+L ++PE L + C
Sbjct: 294 TKSGTSTLELAMGNVPMAVTYRVNPVTATIARRLIKVPHVAMVNLLAGREVVPELLQENC 353
Query: 252 TPDTLTH 258
TP L
Sbjct: 354 TPKKLAE 360
>sp|Q0BS63|LPXB_GRABC Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=lpxB PE=3 SV=1
Length = 393
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 130/247 (52%), Gaps = 20/247 (8%)
Query: 14 GPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVED 73
G HYVAP WAW+ E R+K + +LC+LP EE + FVGHPV+E
Sbjct: 111 GIKRVHYVAPQVWAWR--EHRVKRFPGLWERMLCLLPFEEKWFAERNVPGQFVGHPVLES 168
Query: 74 CLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 133
+ +G++ F+ ++S+ A VI L+PGSR E R+LP++ +T+
Sbjct: 169 GAD--------------QGDAARFRARHSLADNARVIVLMPGSRANEAGRLLPVYGETLR 214
Query: 134 LLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCT 193
LL + P + VI +A + + + G + WPV I + + K+DAF+A+ AL
Sbjct: 215 LLMQNIPTITPVIPLASS--TAHTVRGAVSSWPVQPIFITDIAD--KHDAFAAAEAALTK 270
Query: 194 SGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTP 253
SGT +EL + +P V YR + +T R ++PY+++ N+L I+PE L + CTP
Sbjct: 271 SGTSTLELAMGGVPMAVTYRVNRITAMMARRLIRVPYVAMVNLLAGREIVPELLQENCTP 330
Query: 254 DTLTHLL 260
+ +L
Sbjct: 331 TKIAAVL 337
>sp|Q5QYW1|LPXB_IDILO Lipid-A-disaccharide synthase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=lpxB PE=3 SV=1
Length = 379
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 127/248 (51%), Gaps = 19/248 (7%)
Query: 14 GPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVED 73
G + HYV+PS WAW+ E R+K + VDH+LC+LP E+ + L ATFVGHP+ +D
Sbjct: 114 GISTIHYVSPSVWAWR--EGRIKGIKKAVDHVLCLLPFEKDFYDKHQLPATFVGHPLADD 171
Query: 74 CLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 133
+ M+ + +N+ + +++LPGSR E+ARM P+F K
Sbjct: 172 --------------IPMQWQQTEARNELELEPAVMYLAILPGSRKGEIARMAPVFLKVAN 217
Query: 134 LLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCT 193
L + +PEL V + + + Q P +I++P G S +A+ L T
Sbjct: 218 KLAERYPELRFVAPMISEARAAQFRELVDQYSPELNIVLPVGESR---KVMAAANYLLLT 274
Query: 194 SGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTP 253
SGTVA+E L + P VVAYR H+L+ I+ P+ SLPN+L I+PE +
Sbjct: 275 SGTVALEALLIKRPMVVAYRFHWLSYQIIKRLFHAPFFSLPNLLAGKEIVPELAQSDASE 334
Query: 254 DTLTHLLM 261
+ + L+
Sbjct: 335 EAIEQALV 342
>sp|Q3JR42|LPXB_BURP1 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
1710b) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|A3NWL7|LPXB_BURP0 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
1106a) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|A1V555|LPXB_BURMS Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain SAVP1)
GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|Q62JD7|LPXB_BURMA Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain ATCC
23344) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|A2SB86|LPXB_BURM9 Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain NCTC
10229) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|A3MKS9|LPXB_BURM7 Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain NCTC
10247) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|Q63T25|LPXB_BURPS Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
K96243) GN=lpxB PE=3 SV=1
Length = 388
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPDGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPVLRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|Q7NVY1|LPXB_CHRVO Lipid-A-disaccharide synthase OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=lpxB PE=3 SV=1
Length = 386
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 26/244 (10%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
HYV+PS WAW+ R++ + V+H+LC+ P E + R G+ T+VGHP+
Sbjct: 120 HYVSPSVWAWR--PERVQKIGRAVNHVLCLFPMEPPLYRQAGVPVTYVGHPLA------- 170
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
E+ +E + E +++ +P G V +L+PGSR E+ M+PI+ T LL
Sbjct: 171 -------SEIPLEPDREAMRDQLGLPQGVPVFTLMPGSRQSELEYMVPIYLDTARLLLRQ 223
Query: 139 FPELITVIHVAPNRHVENYITGLIQ----KWPVPSILVPGGSSNLKYDAFSASRVALCTS 194
+PE ++ +A ++ + L + P+ + G + + A AS V L TS
Sbjct: 224 YPEAQFLVPLATRATMDQFEQMLYRFKARDLPIRKLF---GHAQM---AMIASDVVLVTS 277
Query: 195 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 254
GT +E+ L + P V++Y+ LT ++ K K+PY+ LPNIL ++PE L + TP
Sbjct: 278 GTATLEVALTKRPMVISYKLSALTYRLVKRKIKLPYVGLPNILCGRFVVPELLQKQATPQ 337
Query: 255 TLTH 258
L
Sbjct: 338 KLAE 341
>sp|A9AIM7|LPXB_BURM1 Lipid-A-disaccharide synthase OS=Burkholderia multivorans (strain
ATCC 17616 / 249) GN=lpxB PE=3 SV=1
Length = 389
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P L V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGLRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|A0K8D0|LPXB_BURCH Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
HI2424) GN=lpxB PE=3 SV=1
Length = 389
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+D + +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 ADD--------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|Q1BHG9|LPXB_BURCA Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
AU 1054) GN=lpxB PE=3 SV=1
Length = 389
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+D + +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 ADD--------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|B4ECL8|LPXB_BURCJ Lipid-A-disaccharide synthase OS=Burkholderia cepacia (strain J2315
/ LMG 16656) GN=lpxB PE=3 SV=1
Length = 389
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+D + +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 ADD--------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|B1JUD7|LPXB_BURCC Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
MC0-3) GN=lpxB PE=3 SV=1
Length = 389
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+D + +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 ADD--------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|A4JF62|LPXB_BURVG Lipid-A-disaccharide synthase OS=Burkholderia vietnamiensis (strain
G4 / LMG 22486) GN=lpxB PE=3 SV=1
Length = 389
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L+++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQEREPGVRFVMPAA-TPALRELLQPLVAAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|A3NAT4|LPXB_BURP6 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
668) GN=lpxB PE=3 SV=1
Length = 388
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+
Sbjct: 113 RGAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ + ++ + +P G VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLAPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL++ P + V+ A + + L+ P S+ + G + + A +A+
Sbjct: 217 AMELMQQREPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TPD L
Sbjct: 333 ATPDAL 338
>sp|Q39F56|LPXB_BURS3 Lipid-A-disaccharide synthase OS=Burkholderia sp. (strain 383)
GN=lpxB PE=3 SV=1
Length = 389
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P+ VI++LPGSR E+A + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRALLQPLVDAHPKLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|B1YS61|LPXB_BURA4 Lipid-A-disaccharide synthase OS=Burkholderia ambifaria (strain
MC40-6) GN=lpxB PE=3 SV=1
Length = 389
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P+ VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIGLIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|Q0BE28|LPXB_BURCM Lipid-A-disaccharide synthase OS=Burkholderia ambifaria (strain
ATCC BAA-244 / AMMD) GN=lpxB PE=3 SV=1
Length = 389
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+
Sbjct: 113 RDAGIPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + +P+ VI++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIGLIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A + + L+ P ++ + G S + A +A+
Sbjct: 217 AMALMQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|Q2SWY5|LPXB_BURTA Lipid-A-disaccharide synthase OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=lpxB
PE=3 SV=1
Length = 388
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 123/238 (51%), Gaps = 20/238 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ ++
Sbjct: 121 HFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLADEI---- 174
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P E M G + +P VI++LPGSR E+ + P F + L++
Sbjct: 175 ------PLEPDMHGA----RIALGLPDSGPVIAVLPGSRRSEIELIGPTFFDAMALMQQR 224
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P + V+ A + + L+ P+ S+ + G + + A +A+ L SGTV
Sbjct: 225 EPGVRFVVPAA-TPALRELLQPLVDAHPLLSVTLTEGRAQV---AMTAADAILVKSGTVT 280
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+ L
Sbjct: 281 LEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPEAL 338
>sp|Q8XZH8|LPXB_RALSO Lipid-A-disaccharide synthase OS=Ralstonia solanacearum (strain
GMI1000) GN=lpxB PE=3 SV=1
Length = 390
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 20/240 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
H+V+PS WAW+ G R+K +A VDHILC+ P E I G+ AT+VGHP+ +
Sbjct: 123 HFVSPSIWAWRAG--RIKTIARAVDHILCLFPFEPEIYARAGIPATYVGHPLAD------ 174
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
E+ +E + E +++ +P G V+++LPGSR EV + P + ++
Sbjct: 175 --------EIPLEPDVEGARSRLGLPLGRKVVAVLPGSRNSEVKLLGPTLFAAMARMQAV 226
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P+L V+ A N + I + + P + V G S + A A+ V L SGT
Sbjct: 227 EPDLAFVLPAA-NAMLRERIDAMRAEHPGLHLWVVDGQS---HAAMEAADVILLASGTAT 282
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 258
+E L + P V+ Y+ +LT ++ K +PY+ LPNIL ++PE L TP+ L
Sbjct: 283 LEAALYKKPMVITYKVPWLTAQIMKRKGYLPYVGLPNILSGRFVVPELLQDDATPEALAR 342
>sp|B2JIB3|LPXB_BURP8 Lipid-A-disaccharide synthase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=lpxB PE=3 SV=1
Length = 389
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K + VDH+LC+ P E+A+ +G+ AT+VGHP+
Sbjct: 113 RDAGIPTIHFVCPSIWAWRGG--RIKKIVKAVDHMLCVFPFEKALLEKSGVTATYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ +E ++ + + +P VI++LPGSR E+A + P F
Sbjct: 171 AD--------------EIPLEPDTAGARLELGLPESGPVIAVLPGSRRSEIALIGPTFFD 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+EL+ P + V+ A E + +P L G + A +A+
Sbjct: 217 AMELMLQREPGVRFVMPAATPALRELLKPLVDAHANLPLTLTDGNAQR----AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHF 332
Query: 251 CTPDTL 256
TP+ L
Sbjct: 333 ATPEAL 338
>sp|Q13XC9|LPXB_BURXL Lipid-A-disaccharide synthase OS=Burkholderia xenovorans (strain
LB400) GN=lpxB PE=3 SV=1
Length = 389
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 123/238 (51%), Gaps = 20/238 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
H+V PS WAW+GG R+K +A VDH+LC+ P E A+ G+AA++VGHP+ +
Sbjct: 121 HFVCPSIWAWRGG--RIKKIAKAVDHMLCVFPFETALLEKAGVAASYVGHPLAD------ 172
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
E+ + ++ + + +I++LPGSR E+ + P F +E+++
Sbjct: 173 --------EIPLVPDTLGARRALGLAEEGPIIAVLPGSRRSEIDLIGPTFFAAIEMMQHQ 224
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P L V+ A + + L+ P ++ + G S L A +A+ L SGTV
Sbjct: 225 EPALRFVMPAA-TPALREMLRPLVDSHPGLALTITDGQSQL---AMTAADAILVKSGTVT 280
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP L
Sbjct: 281 LEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHFATPQAL 338
>sp|Q1D393|LPXB_MYXXD Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK
1622) GN=lpxB PE=3 SV=1
Length = 383
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
+YV+P WAW+ G R++ + VD +LCILP EE R G++A +VG PVVE
Sbjct: 117 YYVSPMIWAWRRG--RVRTIKRLVDRMLCILPFEEDFYREAGVSARYVGSPVVEQV---- 170
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P P + F+ + + A ++LLPGSR+ E+ R+LP + + L
Sbjct: 171 ----PSP------DTATAFRERLGLSKDAPTLALLPGSRMGEIRRLLPDMVEAAKRLSAE 220
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P L V+ +AP E IT + V ILV G + + AS A+ SGT
Sbjct: 221 RPGLQVVVPLAPTIDREE-ITSRFEGSGVTPILVEGRAP----EVVGASDAAVVASGTAV 275
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 258
+E L + P VV YR +T W R K+ ++SL N+L ++PE L TP+ +
Sbjct: 276 LEAGLMQRPLVVVYRVSLITYWVGRLMLKVAFVSLINLLAGRRVVPELLQGEMTPERIAE 335
>sp|B2T5I1|LPXB_BURPP Lipid-A-disaccharide synthase OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=lpxB PE=3 SV=1
Length = 389
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G H+V PS WAW+GG R+K +A VDH+LC+ P E A+ G+AA++VGHP+
Sbjct: 113 REAGIPTVHFVCPSIWAWRGG--RIKKIAKAVDHMLCVFPFETALLEKAGVAASYVGHPL 170
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ E+ + ++ + + +I++LPGSR E+ + P F
Sbjct: 171 AD--------------EIPLVPDTLGARRALGLAQDGPIIAVLPGSRRSEIDLIGPTFFA 216
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+E+++ P L V+ A + + L+ P ++ + G + L A +A+
Sbjct: 217 AMEMMQHQEPNLRFVMPAA-TPALREMLRPLVDSHPGLALTITDGQAQL---AMTAADAI 272
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 273 LVKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHF 332
Query: 251 CTPDTL 256
TP L
Sbjct: 333 ATPQAL 338
>sp|Q2W4D7|LPXB_MAGSA Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=lpxB PE=3 SV=1
Length = 390
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 130/252 (51%), Gaps = 31/252 (12%)
Query: 17 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 76
HYVAP WAWK G R K LA +D +L +LPNE GL VGHPV+E
Sbjct: 114 RIHYVAPMVWAWKSG--RTKTLARVLDLLLTLLPNEPEWFEKEGLKTLHVGHPVIEGAAS 171
Query: 77 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 136
G+ F+ ++ ++ +LPGSR E A++L F +T+ LL
Sbjct: 172 --------------RGDGAAFRVRHGFAPDRKLLCVLPGSRHSETAKLLAPFGETIALLA 217
Query: 137 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 196
FP+L V+ V + ++ ++ W +PS++V G KYDAF+A AL SGT
Sbjct: 218 RRFPDLAVVVPTVET--VADEVSQAVKSWALPSMVVRGPE---KYDAFAACDAALAASGT 272
Query: 197 VAVELQLARLPCVVAYR----AHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 252
VA+EL +ARLP V+ Y+ + F+ F+ K +++L NIL+D ++PE L C
Sbjct: 273 VALELAMARLPAVITYKVSPVSAFIATRFLGLSLK--FVTLVNILVDEAVMPELLQDDCR 330
Query: 253 PDTLT----HLL 260
PD L HLL
Sbjct: 331 PDKLAAAVEHLL 342
>sp|Q1LNE5|LPXB_RALME Lipid-A-disaccharide synthase OS=Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839) GN=lpxB PE=3 SV=1
Length = 401
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 24/242 (9%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
H+V+PS WAW+GG R++ +A VDHILC+ P E I G+ AT+VGHP+ +
Sbjct: 134 HFVSPSIWAWRGG--RIRTIARAVDHILCLFPFEPEIYAKAGIPATYVGHPLAD------ 185
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
+ M + + K ++P G ++++LPGSR EV + F ++ +
Sbjct: 186 --------VIPMVPDVAGARAKLALPEGKRIVAVLPGSRQSEVRNLGATFFAAMDRMHRM 237
Query: 139 FPELITVIHVA--PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 196
L V+ VA P R + + GL ++P + V G S+L A ++ V L SGT
Sbjct: 238 DGNLAFVLPVASAPLREI---VAGLHAQYPDIDLTVVDGQSHL---AMESADVVLLASGT 291
Query: 197 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+E L + P V++Y+ +LT ++ + +PY+ LPNIL ++PE L TP+ L
Sbjct: 292 ATLEAALYKKPMVISYKVPWLTAQIMKRQGYLPYVGLPNILSGRFVVPELLQDDATPEAL 351
Query: 257 TH 258
Sbjct: 352 AR 353
>sp|Q470F0|LPXB_CUPPJ Lipid-A-disaccharide synthase OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=lpxB PE=3 SV=1
Length = 402
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 123/242 (50%), Gaps = 24/242 (9%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
H+V+PS WAW+GG R++ +A VDHILC+ P E I G+ AT+VGHP+ +
Sbjct: 135 HFVSPSIWAWRGG--RIRTIARAVDHILCLFPFEPEIYAKAGIPATYVGHPLAD------ 186
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
+ M + + +P+G V+++LPGSR EV + F + +
Sbjct: 187 --------VIPMVPDVAGARAALDLPAGCRVVAVLPGSRQSEVRNLGATFFAAMARMHRM 238
Query: 139 FPELITVIHVA--PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 196
P L V+ A P R + + L Q++P + + G+S + A A+ V L SGT
Sbjct: 239 DPNLAFVLPAASAPLRAI---VEELHQQYPELRLTIVDGNS---HQAMEAADVVLLASGT 292
Query: 197 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+E L + P V++Y+ +LT ++ + +PY+ LPNIL ++PE L TP+ L
Sbjct: 293 ATLEAALYKKPMVISYKVPWLTAQIMKRQGYLPYVGLPNILSGRFVVPELLQDDATPEAL 352
Query: 257 TH 258
Sbjct: 353 AR 354
>sp|Q47F79|LPXB_DECAR Lipid-A-disaccharide synthase OS=Dechloromonas aromatica (strain
RCB) GN=lpxB PE=3 SV=1
Length = 382
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 23/251 (9%)
Query: 14 GPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVED 73
G HYV+PS WAW+GG R+K +A V+ +L + P E A+ + T+VGHP+ D
Sbjct: 112 GVRTIHYVSPSIWAWRGG--RVKKIAKAVNRVLALFPMEPALYEKERVPVTYVGHPLA-D 168
Query: 74 CLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 133
+ L K + + K S+P + ++LPGSR E+A M F +T +
Sbjct: 169 IIPLQTSK-------------QAVREKLSLPRDYPIFAMLPGSRQGELAMMAETFVETAK 215
Query: 134 LLKDS-FPELITVIHVAPNRHVENYITGLI--QKWPVPSILVPGGSSNLKYDAFSASRVA 190
++++ P + V+ +A + + Q VP L+ G + DA A+ V+
Sbjct: 216 IIRERHLPNAMFVVPLATRETRLQFELAIYNRQAGDVPFRLLFGHAQ----DALGAADVS 271
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGT +E L + P V+ Y+ + W ++ A +PY+ LPN+L ++PE L
Sbjct: 272 LVASGTATLEAALIKRPMVITYKIAKFSYWLMKRMAYLPYVGLPNVLAGRFVVPEILQDE 331
Query: 251 CTPDTLTHLLM 261
TP+ L L+
Sbjct: 332 ATPENLAEALV 342
>sp|Q1QMM4|LPXB_NITHX Lipid-A-disaccharide synthase OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=lpxB PE=3 SV=1
Length = 396
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 119/238 (50%), Gaps = 23/238 (9%)
Query: 20 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVGHPVVEDCLELN 78
YV+PS WAW+ G AR + +VDH+L +LP E E RL G T+VGHP++E L
Sbjct: 127 YVSPSVWAWRPGRAR--AMRRYVDHVLALLPFEPEEYRRLAGPPCTYVGHPLIEQVGMLR 184
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P+ E + + P A ++ LPGSR E+ + +F +T+ L+
Sbjct: 185 ----PDAQE----------RQRRDAPPPALLV--LPGSRRSEIDHHMAVFGETLRTLQLD 228
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
E+ V+ P H+ + + WP+ +V G K AF +R AL SGTV
Sbjct: 229 AGEMDVVLLTMP--HLIEKVKAAVASWPLQPRIVVGEQG--KQAAFRVARAALTKSGTVT 284
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+EL LA +P V AYR + W + + + L N+++ +IPE L + CTP+ L
Sbjct: 285 LELALAGVPMVTAYRGGAVEAWIAQRVIRTSSVILANLVIGENVIPEFLQENCTPENL 342
>sp|Q3SRI5|LPXB_NITWN Lipid-A-disaccharide synthase OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=lpxB PE=3 SV=1
Length = 396
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 123/239 (51%), Gaps = 23/239 (9%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVGHPVVEDCLEL 77
YV+PS WAW+ G AR + ++VDH+L +LP E EA RL G T+VGHP++E L
Sbjct: 126 DYVSPSVWAWRSGRAR--AMRSYVDHVLALLPFEPEAYRRLGGPPCTYVGHPLLEQIGVL 183
Query: 78 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 137
D + + + + +LPGSR E+ L +F +T+ +L+
Sbjct: 184 R----------------PDAQERQRRDADPPTLLVLPGSRRSEIRHHLSVFGETIGMLQQ 227
Query: 138 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 197
S PE+ V+ P H+ + IT + WP +V G + K AF +R AL SGTV
Sbjct: 228 SIPEIEVVLPTTP--HLVDEITPAVATWPRRPRVVIG--EDDKRAAFRVARAALAKSGTV 283
Query: 198 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+EL LA +P V AY+A + W R ++ + L N+++ +IPE L + C P L
Sbjct: 284 TLELALAGVPMVAAYKAGSVEAWIARRVIRVSSVILANLVIRENVIPEFLQEDCVPGKL 342
>sp|Q2IL69|LPXB_ANADE Lipid-A-disaccharide synthase OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=lpxB PE=3 SV=1
Length = 383
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
+YV+P+ WAW+ G A K +A VD +LCILP EE G++A FVGHP E
Sbjct: 121 YYVSPTIWAWRQGRA--KQIARVVDRMLCILPFEERFYEGTGVSARFVGHPFAER----- 173
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P P G E +++ +P+ T I+++PGSR E+ R+LP + E L+ +
Sbjct: 174 ----PPP------GTPESYRSALGLPAARTTIAMVPGSRPSELKRLLPPMLEAAERLRAA 223
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P+ V+ VAP L + LV G + + AS AL SGT
Sbjct: 224 HPDAQFVVPVAPTLDRAALEPYLAAHRTLEVRLVDGRTEEV----VGASDAALVKSGTST 279
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 257
+E L P VV Y+ +L+ R KI +++L NIL I+PE L + +P+ +
Sbjct: 280 LEAGLMLRPMVVVYKLSWLSYAVARMLVKIAHVALVNILAGRGIVPELLQRDASPERMA 338
>sp|B4UHR6|LPXB_ANASK Lipid-A-disaccharide synthase OS=Anaeromyxobacter sp. (strain K)
GN=lpxB PE=3 SV=1
Length = 383
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 120/246 (48%), Gaps = 25/246 (10%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
+YV+P+ WAW+ G A K +A VD +LCILP EE G++A FVGHP E
Sbjct: 121 YYVSPTIWAWRQGRA--KKIARVVDRMLCILPFEERFYEGTGVSARFVGHPFAER----- 173
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P P G +E +++ +P+ T I+++PGSR E+ R+LP + E L+ +
Sbjct: 174 ----PPP------GPAEAYRSALGLPASRTTIAMVPGSRPSELKRLLPPMLQAAERLRAA 223
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P+ V+ VAP L + LV G + + AS AL SGT
Sbjct: 224 HPDAQFVVPVAPTLDRAALEPYLAAHRTLEVRLVDGRTE----EVVGASDAALVKSGTST 279
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT- 257
+E L P VV Y+ +L+ R KI +++L NIL I+PE L +P+ +
Sbjct: 280 LEAGLMLRPMVVVYKLSWLSYAVARMLVKIAHVALVNILAGRGIVPELLQGDASPERMAA 339
Query: 258 ---HLL 260
HLL
Sbjct: 340 EVEHLL 345
>sp|B8JE78|LPXB_ANAD2 Lipid-A-disaccharide synthase OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=lpxB PE=3 SV=1
Length = 383
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
+YV+P+ WAW+ G A K +A VD +LCILP EE G++A FVGHP E
Sbjct: 121 YYVSPTIWAWRQGRA--KKIARVVDRMLCILPFEERFYEGTGVSARFVGHPFAER----- 173
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P P G +E +++ +P+ T I+++PGSR E+ R+LP + E L+ +
Sbjct: 174 ----PPP------GPAEAYRSALGLPASRTTIAMVPGSRPSELKRLLPPMLQAAERLRAA 223
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P+ V+ VAP L + LV G + + AS AL SGT
Sbjct: 224 HPDAQFVVPVAPTLDRAALEPYLAAHRTLEVRLVDGRTE----EVVGASDAALVKSGTST 279
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 257
+E L P VV Y+ +L+ R KI +++L NIL I+PE L +P+ +
Sbjct: 280 LEAGLMLRPMVVVYKLSWLSYAVARMLVKIAHVALVNILAGRGIVPELLQGDASPERMA 338
>sp|Q7VRD3|LPXB_BLOFL Lipid-A-disaccharide synthase OS=Blochmannia floridanus GN=lpxB
PE=3 SV=1
Length = 384
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 20/243 (8%)
Query: 14 GPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVED 73
G HYV+PS WAW+ R+ L ++L + P E++I G+ F+GHP+ +
Sbjct: 114 GITTIHYVSPSIWAWRSN--RVFALKEATHNVLLLFPFEKSIYARCGIPNQFIGHPLAD- 170
Query: 74 CLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVE 133
E+ + N + K+ +PS +++LPGSR +E+ + IF +
Sbjct: 171 -------------EIPLYPNKIALRQKFDIPSNRCCLAILPGSRPKEIQILTKIFMHCAK 217
Query: 134 LLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCT 193
LL+D+ P L +I + H + I + S+ + ++ +A+ AL T
Sbjct: 218 LLQDTIPNLEILIPL----HDTDLINQFVTLTSFISVKFRVLHTLTAWEVMAAADAALLT 273
Query: 194 SGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTP 253
SGT +E LA+ P VVAYR + + IR+ K+ +ISLPN+L PI+ E + + C P
Sbjct: 274 SGTATLECMLAKCPMVVAYRMNPVIFMLIRHLIKVKWISLPNLLAGKPIVQEFIQKKCDP 333
Query: 254 DTL 256
L
Sbjct: 334 QRL 336
>sp|Q4ZWR5|LPXB_PSEU2 Lipid-A-disaccharide synthase OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=lpxB PE=3 SV=1
Length = 380
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+
Sbjct: 109 RRAGIKTVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPL 166
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
+ + +E + + + V++L+PGSR EV R+ +F
Sbjct: 167 AD--------------TIPLESDRAGARAGLGLAQETPVVALMPGSRGGEVGRLGGLFFD 212
Query: 131 TVELLKDSFPELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRV 189
T E L PEL V+ A P R + + L+Q +P L+ G S + A +A
Sbjct: 213 TAERLLARCPELRFVLPCASPQRRAQ--VEQLLQGRDLPVTLLDGQS----HVALAACDA 266
Query: 190 ALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQ 249
L SGT +E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L
Sbjct: 267 VLIASGTATLEALLYKRPMVVAYRLAPLTFWILKRMVKSPYVSLPNLLAQRLLVPELLQD 326
Query: 250 ACTPDTLTHLLM 261
TP+ L L+
Sbjct: 327 DATPEALARTLL 338
>sp|Q1H152|LPXB_METFK Lipid-A-disaccharide synthase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=lpxB PE=3 SV=1
Length = 378
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 24/246 (9%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
HYV+PS WAW+ G ++K + V H+L + P E I R G+A ++VGHP+ D L
Sbjct: 114 HYVSPSIWAWRRG--KIKKIQQAVSHMLALFPFEPEIYRQAGVAVSYVGHPLA-DML--- 167
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
P E MEG E+ K +P + V+++LPGSR EV ++ ++ KT +L+
Sbjct: 168 ------PMEPDMEGAREELK----LPQDSLVVAMLPGSRQSEVQQLADLYIKTAKLILSE 217
Query: 139 FPE---LITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSG 195
P+ L+ +I R + + + +P ++ G + + A A+ + SG
Sbjct: 218 RPDARFLVPLI-TRETRAIFERALYANEGYDLPVSIMFGHA----HQAMEAANAVIVASG 272
Query: 196 TVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDT 255
T +E L + P ++ YR L+ ++ +PY+ LPN+L I+PE L PD
Sbjct: 273 TATLEAALIKRPMIITYRMPNLSWQILKRMKYLPYVGLPNVLAGRFIVPELLQHDAVPDK 332
Query: 256 LTHLLM 261
L L+
Sbjct: 333 LAATLL 338
>sp|A8GID3|LPXB_SERP5 Lipid-A-disaccharide synthase OS=Serratia proteamaculans (strain
568) GN=lpxB PE=3 SV=1
Length = 382
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 117/249 (46%), Gaps = 19/249 (7%)
Query: 13 NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 72
G HYV+PS WAW+ + R+ + D +L LP E+A + F+GH +
Sbjct: 112 RGIRTIHYVSPSVWAWR--QKRVFKIGKATDLVLAFLPFEKAFYDRFNVPCRFIGH-TMA 168
Query: 73 DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 132
D + L +P +L + K + + A ++LLPGSR EV + F KT
Sbjct: 169 DAMPL------QPDKLAA-------RAKLGIAADARCLALLPGSRGAEVEMLSADFLKTA 215
Query: 133 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 192
+LL+ +PEL V+ + + E + + P + + G +A AS AL
Sbjct: 216 QLLRTRYPELELVVPLVNAKRREQFERIKAEVAPELRVHLLNGQGR---EAMIASDAALL 272
Query: 193 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 252
SGT A+E LA+ P VV YR T W + K PY+SLPN+L I+ E L C
Sbjct: 273 ASGTAALECMLAKCPMVVGYRMKPFTFWIAQRLVKTPYVSLPNLLAGREIVTELLQHDCV 332
Query: 253 PDTLTHLLM 261
PD L +M
Sbjct: 333 PDKLAASVM 341
>sp|B5Y1I9|LPXB_KLEP3 Lipid-A-disaccharide synthase OS=Klebsiella pneumoniae (strain 342)
GN=lpxB PE=3 SV=1
Length = 383
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 13 NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 72
G HYV+PS WAW+ + R+ + D +L LP E+A + F+GH +
Sbjct: 113 QGIKTIHYVSPSVWAWR--QKRVFKIGRATDLVLAFLPFEKAFYDKFNVPCRFIGHTMA- 169
Query: 73 DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 132
D + L+ KG +++ +P ++LLPGSR EV + F KT
Sbjct: 170 DAMPLDPDKGAA-------------RDRLGIPHNVRCLALLPGSRGAEVEMLSADFLKTA 216
Query: 133 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 192
+LL+ ++P+L V+ + + E + I+ P ++V + DA AS AL
Sbjct: 217 QLLRVTYPDLQVVVPLVNAKRREQFER--IKAETAPDMIVHMLDGQAR-DAMIASDAALL 273
Query: 193 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 252
SGT A+E LA+ P VV YR T W + K Y+SLPN+L ++ E L C
Sbjct: 274 ASGTAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQDECE 333
Query: 253 P 253
P
Sbjct: 334 P 334
>sp|Q5ZRD7|LPXB2_LEGPH Lipid-A-disaccharide synthase 2 OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=lpxB2 PE=3 SV=1
Length = 385
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 19/240 (7%)
Query: 18 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 77
H V+P WAW+ + R+ + VD +L + P EEA R +G++A F+GHP+ D +E+
Sbjct: 118 IHLVSPKVWAWR--QKRVHLIKKAVDLVLTLFPFEEAFYRQHGVSAQFIGHPLA-DLIEI 174
Query: 78 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 137
N + + KY+ S T++++LPGSR+ E+ M P+F + ++ +
Sbjct: 175 N-------------PSCSTLRKKYNYHSDDTILAVLPGSRVGEIKYMGPLFLEVMQRIAV 221
Query: 138 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 197
P + ++ +A + L ++ I + G++ +A + S V L SGT
Sbjct: 222 ERPHVHFIVPIACQDLYPVFFKQLHAEYGHLKIQIIQGNAR---EAMAISDVVLTKSGTA 278
Query: 198 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 257
+E L + P VVA++ LT I + K+PYI+LPN+L +IPE + + D++T
Sbjct: 279 TLEAMLLKRPMVVAFKWGILTHAIIAPQVKVPYIALPNLLAGKKLIPEFVQEKANVDSIT 338
>sp|Q6ALW0|LPXB_DESPS Lipid-A-disaccharide synthase OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=lpxB PE=3 SV=1
Length = 386
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 18 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 77
F+Y+ P WAW+ G R+K + D + ILP EE R G AA++VGHP++ D + +
Sbjct: 121 FYYITPQVWAWRSG--RIKTIGERTDQLGVILPFEEEFFRQRGQAASYVGHPLL-DNVSI 177
Query: 78 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 137
L + E+F K+ + A + LLPGSR +E++ +LP F + + L+D
Sbjct: 178 KLSR-------------EEFLTKHRIGPAAKYVGLLPGSREKEISALLPDFLRAAKRLQD 224
Query: 138 SFPELIT-VIHVAPNRHVENYI-TGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSG 195
E I+ ++ +A E + GL + + I V S +Y+ + + SG
Sbjct: 225 ECSEKISFLLPIAATIDREQLLENGLAEYQDLLDIHVI---SEDRYELMACCDAVVAASG 281
Query: 196 TVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDT 255
TV +EL + +P +V YR ++ W R KI + SL N++ ++ E L TP+
Sbjct: 282 TVTLELAILEVPMLVVYRTSPISYWVGRKLVKIEFFSLVNLIAGREVVTELLQDEVTPER 341
Query: 256 LT 257
++
Sbjct: 342 IS 343
>sp|Q1I639|LPXB_PSEE4 Lipid-A-disaccharide synthase OS=Pseudomonas entomophila (strain
L48) GN=lpxB PE=3 SV=1
Length = 375
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 22/250 (8%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+
Sbjct: 108 RQAGIKTVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPL 165
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
D + L +G EL + + VI+L+PGSR EV R+ +F
Sbjct: 166 A-DTIPLESDRGAARAELGL--------------AEGPVIALMPGSRGGEVGRLGALFLD 210
Query: 131 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 190
+ L++ P + V+ A N + +++ +P L+ G S + A +A
Sbjct: 211 AAQRLRELVPGVRFVLPCA-NAARRAQVEQMLEGRDLPLTLLDGRS----HQALAACDAV 265
Query: 191 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 250
L SGT +E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L A
Sbjct: 266 LIASGTATLEAMLYKRPMVVAYRLAPLTYWILKRMVKSPYVSLPNLLAQRMLVPELLQDA 325
Query: 251 CTPDTLTHLL 260
T + L L
Sbjct: 326 ATSEALAQTL 335
>sp|B3PBR1|LPXB_CELJU Lipid-A-disaccharide synthase OS=Cellvibrio japonicus (strain
Ueda107) GN=lpxB PE=3 SV=1
Length = 384
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 117/243 (48%), Gaps = 20/243 (8%)
Query: 19 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 78
HYV+PS WAW+ + R+ N+A VD +L +LP E +G+ FVGH + D + N
Sbjct: 117 HYVSPSVWAWR--QKRIINIARSVDLMLTLLPFEARFYEEHGVPVEFVGHHLA-DAIPDN 173
Query: 79 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 138
+ K + +P +++LLPGSR EV RM +F +T +
Sbjct: 174 VDKTAA-------------RQLLGLPGQGRIVALLPGSRSSEVERMAELFFRTAVFCIEQ 220
Query: 139 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 198
P L V+ A + L P LV G S DA +A+ V L SGTV
Sbjct: 221 DPSLHFVVPAANSDRYRQLHIELNDFVDFPIHLVNGHSQ----DAMAAADVLLVASGTVT 276
Query: 199 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 258
+E L + P VVAY+ LT + + K P++SLPN+L ++PE L TP+ L+
Sbjct: 277 LEALLLKKPMVVAYKMAPLTYRILSWLVKTPFVSLPNLLAQKMLVPELLQDKATPEALSA 336
Query: 259 LLM 261
+M
Sbjct: 337 AVM 339
>sp|Q89KQ7|LPXB_BRAJA Lipid-A-disaccharide synthase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=lpxB PE=3 SV=1
Length = 392
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 25/239 (10%)
Query: 20 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVGHPVVEDCLELN 78
YV+P WAW+ G AR + +VDH+L +LP E E +L G ++VGHP++E
Sbjct: 125 YVSPQLWAWRPGRAR--TMLGYVDHVLGLLPFEPEEYRKLGGPPCSYVGHPLIE-----Q 177
Query: 79 LGKGPEPCELKMEGNSEDFKNKYS-VPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 137
LG + N+E+ K + S +P V+ +LPGSR E+ + +F + L+
Sbjct: 178 LGS--------LRPNAEEQKRRNSELP----VLLVLPGSRRSEIRHHIEVFGAALGRLQA 225
Query: 138 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 197
++ P H+E + I WPV +V G + K AF + AL SGTV
Sbjct: 226 EGRAFELMLPTMP--HLEATVREGIASWPVKPQIVIGEAE--KRAAFRIAHAALAKSGTV 281
Query: 198 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 256
+EL L+ +P V AYR + + +R ++ + L N+++ +IPE L + CTP+ L
Sbjct: 282 TLELALSGIPMVTAYRVGAIEAFILRRAIRVSSVILANLVIGEDVIPEFLQEDCTPEKL 340
>sp|Q886N0|LPXB_PSESM Lipid-A-disaccharide synthase OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=lpxB PE=3 SV=1
Length = 380
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 11 RLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPV 70
R G HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+
Sbjct: 109 RRAGIKTVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHPL 166
Query: 71 VEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAK 130
D + L +G EL G S D V++L+PGSR EV R+ +F
Sbjct: 167 A-DTIPLESDRGATRAEL---GLSVD----------GPVVALMPGSRGGEVGRLGALFFD 212
Query: 131 TVELLKDSFPELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRV 189
E L P L V+ A P R + + L+Q +P L+ G S + A +A
Sbjct: 213 AAERLLVERPGLRFVLPCASPQRRAQ--VEQLLQGRDLPITLLDGRS----HVALAACDA 266
Query: 190 ALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQ 249
L SGT +E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L
Sbjct: 267 VLIASGTATLEALLYKRPMVVAYRMAPLTFWVLKRLVKSPYVSLPNLLAQRLLVPELLQD 326
Query: 250 ACTPDTLTHLLM 261
TP+ L L+
Sbjct: 327 DATPEALARTLL 338
>sp|Q667K2|LPXB_YERPS Lipid-A-disaccharide synthase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=lpxB PE=3 SV=1
Length = 394
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 13 NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVE 72
G HYV+PS WAW+ + R+ + D +L LP E+A + F+GH + +
Sbjct: 124 RGIRTIHYVSPSVWAWR--QKRVFKIGKATDMVLAFLPFEKAFYDRFNVPCRFIGHTMAD 181
Query: 73 DCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTV 132
+ + + + + + + AT ++LLPGSR EV + F +T
Sbjct: 182 --------------AMPLVPDQQAARAELGIAPNATCLALLPGSRHSEVEMLSADFLRTA 227
Query: 133 ELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALC 192
+L+D P L V+ + ++ E + + P S+ + G + + A AS AL
Sbjct: 228 VILRDKLPNLEVVVPLVNSKRREQFERIKAEIAPDLSVHLLDGKARV---AMIASDAALL 284
Query: 193 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 252
SGT A+E LA+ P VV YR T W K PY+SLPN+L ++ E L Q C
Sbjct: 285 ASGTAALECMLAKCPMVVGYRMKPFTFWLAERLVKTPYVSLPNLLAGEELVTELLQQECQ 344
Query: 253 PDTLTHLLM 261
P L L+
Sbjct: 345 PQKLAGALL 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,675,662
Number of Sequences: 539616
Number of extensions: 4231873
Number of successful extensions: 9489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 8447
Number of HSP's gapped (non-prelim): 263
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)