Your job contains 1 sequence.
>024873
MSSVSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRGSRRGYSQSNLCKNCKRPGHFAREC
PNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAP
PLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARH
CPKSGGLGDRYSGGSGARGSGGSGARGGGYRDIVCRNCQQLGHMSRDCMGPLMVCHNCGG
RGHLAYECPSGRFLDRYSRRY
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024873
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005719 - symbol:AT1G75560 species:3702 "Arabi... 812 6.6e-81 1
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer... 235 1.5e-26 2
POMBASE|SPAC13D6.02c - symbol:byr3 "zinc finger protein B... 244 2.5e-26 2
SGD|S000005199 - symbol:GIS2 "Translational activator for... 294 5.2e-26 1
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer... 236 2.7e-25 2
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim... 280 1.6e-24 1
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica... 212 7.9e-24 2
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ... 212 7.9e-24 2
TAIR|locus:2135139 - symbol:CSDP1 "cold shock domain prot... 197 1.1e-23 2
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ... 261 4.3e-23 2
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ... 242 5.4e-23 2
UNIPROTKB|G4N4A8 - symbol:MGG_05948 "Zinc knuckle domain-... 232 1.1e-22 2
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin... 262 1.3e-22 1
UNIPROTKB|G4MRA3 - symbol:MGG_13778 "Zinc finger protein ... 175 2.9e-22 2
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin... 256 5.5e-22 1
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei... 254 9.0e-22 1
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin... 252 1.5e-21 1
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei... 248 3.9e-21 1
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin... 245 8.0e-21 1
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA... 245 8.0e-21 1
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin... 245 8.0e-21 1
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ... 245 8.0e-21 1
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin... 245 8.0e-21 1
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ... 243 1.3e-20 1
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin... 243 1.3e-20 1
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin... 243 1.3e-20 1
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai... 227 6.5e-19 1
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 234 3.0e-18 1
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin... 212 2.5e-17 1
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu... 210 4.1e-17 1
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m... 192 3.3e-15 1
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh... 176 1.6e-13 1
TAIR|locus:2827810 - symbol:CSP3 "cold shock domain prote... 153 2.0e-13 2
ZFIN|ZDB-GENE-030102-2 - symbol:zcchc7 "zinc finger, CCHC... 180 7.1e-13 1
TAIR|locus:2078526 - symbol:AT3G42860 species:3702 "Arabi... 170 3.0e-12 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 175 3.3e-12 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 175 3.3e-12 1
SGD|S000001341 - symbol:AIR1 "Zinc knuckle protein" speci... 166 7.6e-12 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 156 1.9e-11 3
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 156 1.9e-11 3
POMBASE|SPBP35G2.08c - symbol:air1 "zinc knuckle TRAMP co... 158 4.0e-11 1
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi... 161 6.4e-11 1
UNIPROTKB|Q65XV7 - symbol:P0016H04.11 "Os05g0111000 prote... 160 1.8e-10 1
POMBASE|SPAC683.02c - symbol:SPAC683.02c "zf-CCHC type zi... 149 3.5e-10 1
CGD|CAL0005378 - symbol:orf19.4844 species:5476 "Candida ... 151 1.2e-09 1
WB|WBGene00017210 - symbol:F07E5.5 species:6239 "Caenorha... 150 2.0e-09 1
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi... 139 6.2e-08 1
SGD|S000002334 - symbol:AIR2 "RNA-binding subunit of the ... 134 1.5e-07 2
ZFIN|ZDB-GENE-031030-9 - symbol:zcchc9 "zinc finger, CCHC... 135 2.0e-07 1
WB|WBGene00043995 - symbol:F40F12.9 species:6239 "Caenorh... 115 7.5e-07 1
UNIPROTKB|F1ST82 - symbol:ZCCHC7 "Uncharacterized protein... 119 1.3e-06 2
UNIPROTKB|F6V033 - symbol:ZCCHC9 "Uncharacterized protein... 129 1.5e-06 1
UNIPROTKB|E2RQ32 - symbol:MEGF10 "Uncharacterized protein... 121 2.4e-06 2
UNIPROTKB|F1PQG8 - symbol:ZCCHC3 "Uncharacterized protein... 127 2.9e-06 1
UNIPROTKB|J9P281 - symbol:ZCCHC3 "Uncharacterized protein... 127 3.2e-06 1
UNIPROTKB|F1RF07 - symbol:ZCCHC9 "Uncharacterized protein... 125 4.8e-06 1
UNIPROTKB|G4MQ81 - symbol:MGG_09256 "Uncharacterized prot... 127 5.1e-06 2
UNIPROTKB|F1S7I8 - symbol:ZCCHC3 "Uncharacterized protein... 127 6.2e-06 1
UNIPROTKB|A1A4J3 - symbol:ZCCHC3 "Zinc finger, CCHC domai... 127 6.2e-06 1
UNIPROTKB|Q9NUD5 - symbol:ZCCHC3 "Zinc finger CCHC domain... 127 6.2e-06 1
UNIPROTKB|F1MAP4 - symbol:Megf10 "Protein Megf10" species... 117 8.1e-06 2
MGI|MGI:2685177 - symbol:Megf10 "multiple EGF-like-domain... 117 8.1e-06 2
UNIPROTKB|F1ML79 - symbol:ZCCHC9 "Uncharacterized protein... 123 8.7e-06 1
UNIPROTKB|E1BZR6 - symbol:ZCCHC9 "Uncharacterized protein... 121 1.0e-05 1
UNIPROTKB|E2RIR0 - symbol:ZCCHC7 "Uncharacterized protein... 115 1.0e-05 2
UNIPROTKB|F1MET4 - symbol:MEGF10 "Uncharacterized protein... 116 1.0e-05 2
UNIPROTKB|Q8N567 - symbol:ZCCHC9 "Zinc finger CCHC domain... 122 1.2e-05 1
RGD|1585203 - symbol:Zcchc3 "zinc finger, CCHC domain con... 124 1.4e-05 1
UNIPROTKB|E1C393 - symbol:MEGF10 "Uncharacterized protein... 114 1.9e-05 2
MGI|MGI:1916335 - symbol:Zcchc9 "zinc finger, CCHC domain... 120 2.1e-05 1
RGD|735084 - symbol:Megf10 "multiple EGF-like domains 10"... 117 2.6e-05 1
TAIR|locus:2057295 - symbol:AT2G12880 species:3702 "Arabi... 101 3.1e-05 1
ASPGD|ASPL0000046912 - symbol:AN1944 species:162425 "Emer... 124 3.3e-05 1
UNIPROTKB|F1M989 - symbol:Zcchc7 "Zinc finger CCHC domain... 114 4.6e-05 2
RGD|1310467 - symbol:Zcchc7 "zinc finger, CCHC domain con... 114 5.3e-05 2
UNIPROTKB|Q96KG7 - symbol:MEGF10 "Multiple epidermal grow... 110 5.8e-05 2
UNIPROTKB|F1MUH8 - symbol:ZCCHC7 "Zinc finger CCHC domain... 118 6.5e-05 2
UNIPROTKB|Q2KIN0 - symbol:ZCCHC7 "Zinc finger CCHC domain... 118 6.5e-05 2
MGI|MGI:2442912 - symbol:Zcchc7 "zinc finger, CCHC domain... 112 7.1e-05 2
UNIPROTKB|P69730 - symbol:gag "Gag polyprotein" species:1... 119 8.1e-05 1
RGD|1307450 - symbol:Zcchc9 "zinc finger, CCHC domain con... 115 8.6e-05 1
UNIPROTKB|A0JM12 - symbol:megf10 "Multiple epidermal grow... 115 9.0e-05 2
TAIR|locus:2183607 - symbol:AT5G36240 species:3702 "Arabi... 88 9.4e-05 2
UNIPROTKB|F1RKL7 - symbol:MEGF10 "Uncharacterized protein... 113 0.00019 1
UNIPROTKB|Q8N3Z6 - symbol:ZCCHC7 "Zinc finger CCHC domain... 116 0.00022 1
TAIR|locus:2149234 - symbol:AT5G20220 species:3702 "Arabi... 114 0.00023 1
TAIR|locus:2083936 - symbol:RS2Z32 "arginine/serine-rich ... 111 0.00029 1
UNIPROTKB|D6RAT4 - symbol:CNBP "Cellular nucleic acid-bin... 92 0.00033 1
UNIPROTKB|P05890 - symbol:gag "Gag polyprotein" species:1... 114 0.00034 1
TAIR|locus:2049766 - symbol:RS2Z33 "arginine/serine-rich ... 110 0.00040 1
TAIR|locus:2047092 - symbol:GRP2B "glycine-rich protein 2... 106 0.00047 1
ZFIN|ZDB-GENE-080506-1 - symbol:megf10 "multiple EGF-like... 111 0.00071 2
UNIPROTKB|P35962 - symbol:gag "Gag polyprotein" species:3... 111 0.00076 1
UNIPROTKB|F1M4B9 - symbol:F1M4B9 "Uncharacterized protein... 100 0.00085 1
>TAIR|locus:2005719 [details] [associations]
symbol:AT1G75560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:BT005709
EMBL:AK118306 EMBL:AK175193 EMBL:AK175269 EMBL:AK175304
EMBL:AK175841 EMBL:AK176208 EMBL:AK176516 EMBL:AK176616
EMBL:AK176626 IPI:IPI00543969 RefSeq:NP_001077828.1
RefSeq:NP_565112.1 UniGene:At.34758 ProteinModelPortal:Q8GXC5
SMR:Q8GXC5 PaxDb:Q8GXC5 PRIDE:Q8GXC5 EnsemblPlants:AT1G75560.1
EnsemblPlants:AT1G75560.2 GeneID:843892 KEGG:ath:AT1G75560
TAIR:At1g75560 InParanoid:Q8GXC5 OMA:NEGICHS PhylomeDB:Q8GXC5
ProtClustDB:CLSN2689214 ArrayExpress:Q8GXC5 Genevestigator:Q8GXC5
Uniprot:Q8GXC5
Length = 257
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 144/250 (57%), Positives = 168/250 (67%)
Query: 16 PLDRKIRSDRFSYRDAPXXXXXX--XXXXQSNLCKNCKRPGHFARECPNVAICHNCGLPG 73
P DR++RS+R SY DAP Q NLC NCKRPGHFAR+C NV++C+NCGLPG
Sbjct: 24 PRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDCSNVSVCNNCGLPG 83
Query: 74 HIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNC 133
HIA+ECT ++ CWNCREPGH+A NC NEGICH+CGK+GHRARDC+ GDLRLCNNC
Sbjct: 84 HIAAECTAESRCWNCREPGHVASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNC 143
Query: 134 YKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPKXXXXXXXXXX 193
+KQGH AADCTNDKAC NCR +GH+ARDC NDP+CN+C++SGHVARHCPK
Sbjct: 144 FKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNICSISGHVARHCPKGDSNYSDRGS 203
Query: 194 XXXXXXXXXXXXXXXXXXXIVCRNCQQLGHMSRDCMG--PLMVCHNCGGRGHLAYECPSG 251
L MSRD G +++CHNCGGRGH AYECPS
Sbjct: 204 RVRDGGMQRGG----------------LSRMSRDREGVSAMIICHNCGGRGHRAYECPSA 247
Query: 252 RFLDRYSRRY 261
R DR RRY
Sbjct: 248 RVADRGFRRY 257
>ASPGD|ASPL0000028407 [details] [associations]
symbol:AN5111 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
cellular fusion" evidence=IEA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
Uniprot:C8VEX3
Length = 171
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 54/151 (35%), Positives = 70/151 (46%)
Query: 47 CKNCKRPGHFAREC---PNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGI 103
C NC GH +REC P C+ CG GHI+ EC E AG E
Sbjct: 29 CYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQAG------ENERPAGG--QE-- 78
Query: 104 CHTCGKAGHRARDCTAPPLPPGDL--------RLCNNCYKQGHFAADCTNDKACNNCRKT 155
C+ CG+ GH AR+C+ G + C +C GH A DCT + C NC +T
Sbjct: 79 CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYNCGET 138
Query: 156 GHLARDCPNDP----ICNLCNVSGHVARHCP 182
GH++RDCP + +C C GH+ CP
Sbjct: 139 GHVSRDCPTEAKGERVCYQCKQPGHIQSACP 169
Score = 227 (85.0 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 50/151 (33%), Positives = 68/151 (45%)
Query: 46 LCKNCKRPGHFARECPN--VAICHNCGLPGHIASECTT---KALCWNCREPGHMAGNCPN 100
+C NC H AR+CP C+NCG GH++ ECT + C+ C GH++ CP
Sbjct: 7 VCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQ 66
Query: 101 EGI---------CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
G C+ CG+ GH AR+C+ Y G + C +
Sbjct: 67 AGENERPAGGQECYKCGRVGHIARNCSQ-----------GGSYGGGFGGGYGGRQQTCYS 115
Query: 152 CRKTGHLARDCPNDPICNLCNVSGHVARHCP 182
C GH+ARDC C C +GHV+R CP
Sbjct: 116 CGGFGHMARDCTQGQKCYNCGETGHVSRDCP 146
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 43/132 (32%), Positives = 58/132 (43%)
Query: 47 CKNCKRPGHFARECPNVAI---------CHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
C C GH +RECP C+ CG GHIA C+ G G
Sbjct: 51 CYRCGAVGHISRECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGG----GFGGGY 106
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND----KACNNCR 153
+ C++CG GH ARDCT G + C NC + GH + DC + + C C+
Sbjct: 107 GGRQQTCYSCGGFGHMARDCTQ-----G--QKCYNCGETGHVSRDCPTEAKGERVCYQCK 159
Query: 154 KTGHLARDCPND 165
+ GH+ CPN+
Sbjct: 160 QPGHIQSACPNN 171
Score = 125 (49.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 128 RLCNNCYKQGHFAADCTND--KACNNCRKTGHLARDC---PNDPICNLCNVSGHVARHCP 182
R+C NC + H A DC C NC GH++R+C P + C C GH++R CP
Sbjct: 6 RVCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECP 65
Query: 183 K 183
+
Sbjct: 66 Q 66
Score = 99 (39.9 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C +C GHM+RDC C+NCG GH++ +CP+
Sbjct: 113 CYSCGGFGHMARDCTQG-QKCYNCGETGHVSRDCPT 147
Score = 87 (35.7 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 215 CRNCQQLGHMSRDCMGPLM---VCHNCGGRGHLAYECPS 250
C NC + GH+SRDC VC+ C GH+ CP+
Sbjct: 132 CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQSACPN 170
Score = 78 (32.5 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 215 CRNCQQLGHMSRDCM--------------GPLMVCHNCGGRGHLAYECPSGR 252
C C ++GH++R+C G C++CGG GH+A +C G+
Sbjct: 79 CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQ 130
Score = 44 (20.5 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 214 VCRNCQQLGHMSRDC 228
VC C+Q GH+ C
Sbjct: 154 VCYQCKQPGHIQSAC 168
>POMBASE|SPAC13D6.02c [details] [associations]
symbol:byr3 "zinc finger protein Byr3" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IGI] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPAC13D6.02c GO:GO:0005829 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0000747 EMBL:S45038 PIR:T37622 RefSeq:NP_593680.1
ProteinModelPortal:P36627 STRING:P36627 PRIDE:P36627
EnsemblFungi:SPAC13D6.02c.1 GeneID:2542829 KEGG:spo:SPAC13D6.02c
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS OrthoDB:EOG4K0TXR
NextBio:20803871 GO:GO:0031137 Uniprot:P36627
Length = 179
Score = 244 (91.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 55/141 (39%), Positives = 68/141 (48%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTT---KALCWNCREPGHMAGNCPN--- 100
C NC GH AREC +IC+NC GH ASECT + C+ C GH+ +CP+
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPN 78
Query: 101 --EGI-CHTCGKAGHRARDCTAPPLPPGDL----RLCNNCY---KQGHFAADCTNDKACN 150
+G C+ CG+ GH ARDC G R NCY GH A DCT C
Sbjct: 79 PRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCY 138
Query: 151 NCRKTGHLARDCPNDPICNLC 171
+C K GH + +C LC
Sbjct: 139 SCGKIGHRSFECQQASDGQLC 159
Score = 236 (88.1 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 52/133 (39%), Positives = 62/133 (46%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNC--PN-EGICHTCGKAGHRARDCTAPPL 122
C+NCG GH A ECT ++C+NC + GH A C P E C+ CG AGH RDC + P
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPN 78
Query: 123 PPGDLRLCNNCYKQGHFAADC-TNDKA-------------CNNCRKTGHLARDCPNDPIC 168
P C C + GH A DC TN + C C GH ARDC C
Sbjct: 79 PRQGAE-CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKC 137
Query: 169 NLCNVSGHVARHC 181
C GH + C
Sbjct: 138 YSCGKIGHRSFEC 150
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 52/153 (33%), Positives = 70/153 (45%)
Query: 43 QSNLCKNCKRPGHFAREC--PNVA-ICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP 99
+ ++C NC + GH A EC P C+ CG GH+ +C + P P
Sbjct: 34 KGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSS--------PN------P 79
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDL----RLCNNCY---KQGHFAADCTNDKACNN 151
+G C+ CG+ GH ARDC G R NCY GH A DCT C +
Sbjct: 80 RQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYS 139
Query: 152 CRKTGHLARDCP--ND-PICNLCNVSGHVARHC 181
C K GH + +C +D +C CN GH+A +C
Sbjct: 140 CGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 45/134 (33%), Positives = 66/134 (49%)
Query: 43 QSNLCKNCKRPGHFARECPNV------AICHNCGLPGHIASECTTKALCWNCREPGHMAG 96
Q C C GH R+CP+ A C+ CG GHIA +C T + G G
Sbjct: 56 QEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQ----QSGGRFGG 111
Query: 97 NCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC---TNDKACNNCR 153
+ N C+ CG GH+ARDCT G ++ C +C K GH + +C ++ + C C
Sbjct: 112 HRSNMN-CYACGSYGHQARDCTM-----G-VK-CYSCGKIGHRSFECQQASDGQLCYKCN 163
Query: 154 KTGHLARDCPNDPI 167
+ GH+A +C + P+
Sbjct: 164 QPGHIAVNCTS-PV 176
Score = 140 (54.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 130 CNNCYKQGHFAADCTNDKACNNCRKTGHLARDC--PN-DPICNLCNVSGHVARHCP 182
C NC + GH A +CT C NC +TGH A +C P + C C +GH+ R CP
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCP 74
Score = 103 (41.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 214 VCRNCQQLGHMSRDCMGPLM--VCHNCGGRGHLAYECPS 250
+C NC Q GH + +C P C+ CG GHL +CPS
Sbjct: 37 ICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPS 75
Score = 88 (36.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 215 CRNCQQLGHMSRDC-MGPLMVCHNCGGRGHLAYEC 248
C C GH +RDC MG + C++CG GH ++EC
Sbjct: 118 CYACGSYGHQARDCTMG--VKCYSCGKIGHRSFEC 150
Score = 76 (31.8 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 213 IVCRNCQQLGHMSRDCMGPL--MVCHNCGGRGHLAYECPS 250
+ C +C ++GH S +C +C+ C GH+A C S
Sbjct: 135 VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTS 174
Score = 68 (29.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 215 CRNCQQLGHMSRDCM-------GPL------MVCHNCGGRGHLAYECPSG 251
C C ++GH++RDC G M C+ CG GH A +C G
Sbjct: 85 CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG 134
Score = 50 (22.7 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 214 VCRNCQQLGHMSRDCMGPLM 233
+C C Q GH++ +C P++
Sbjct: 158 LCYKCNQPGHIAVNCTSPVI 177
Score = 50 (22.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 166 PICNLCNVSGHVARHCPK 183
P C C +GH AR C K
Sbjct: 17 PRCYNCGENGHQARECTK 34
>SGD|S000005199 [details] [associations]
symbol:GIS2 "Translational activator for mRNAs with internal
ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
"translation regulator activity" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
Uniprot:P53849
Length = 153
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/151 (36%), Positives = 79/151 (52%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL-----CWNCREPGHMAGNCPNE 101
C C + GH A +C + +C+NC PGH+ ++CT C+NC E GH+ C +
Sbjct: 6 CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCN-NCYKQG---HFAADCTNDKA-----CNNC 152
C C + GH +R+C P P R +CYK G H A DC + C C
Sbjct: 66 R-CFNCNQTGHISREC---PEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTC 121
Query: 153 RKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+ GH++RDC ND +C CN +GH+++ CPK
Sbjct: 122 GQAGHMSRDCQNDRLCYNCNETGHISKDCPK 152
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 52/131 (39%), Positives = 73/131 (55%)
Query: 46 LCKNCKRPGHFAREC--PNVAI---CHNCGLPGHIASECTTKALCWNCREPGHMAGNCP- 99
LC NC +PGH +C P C+NCG GH+ SECT + C+NC + GH++ CP
Sbjct: 24 LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQR-CFNCNQTGHISRECPE 82
Query: 100 -------NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNC 152
++ C+ CG H A+DC G L+ C C + GH + DC ND+ C NC
Sbjct: 83 PKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISG-LK-CYTCGQAGHMSRDCQNDRLCYNC 140
Query: 153 RKTGHLARDCP 163
+TGH+++DCP
Sbjct: 141 NETGHISKDCP 151
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 53/155 (34%), Positives = 68/155 (43%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND-----KACNNCRKTGHL 158
C+ CGK GH A DC + RLC NC K GH DCT K C NC +TGH+
Sbjct: 6 CYVCGKIGHLAEDCDSE-------RLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHV 58
Query: 159 ARDCPNDPICNLCNVSGHVARHCPKXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXIV 214
+C N CN +GH++R CP+ +
Sbjct: 59 RSECTVQRCFN-CNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLK 117
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECP 249
C C Q GHMSRDC + C+NC GH++ +CP
Sbjct: 118 CYTCGQAGHMSRDCQNDRL-CYNCNETGHISKDCP 151
Score = 117 (46.2 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 128 RLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDC--PND---PICNLCNVSGHVARHC 181
+ C C K GH A DC +++ C NC K GH+ DC P C C +GHV C
Sbjct: 4 KACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC 62
Score = 104 (41.7 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 145 NDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHC 181
+ KAC C K GHLA DC ++ +C CN GHV C
Sbjct: 2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDC 38
Score = 97 (39.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPSGRFLDRYSR 259
C NC + GH+ +C + C NC GH++ ECP + R+S+
Sbjct: 49 CYNCGETGHVRSECT--VQRCFNCNQTGHISRECPEPKKTSRFSK 91
Score = 78 (32.5 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 213 IVCRNCQQLGHMSRDCM---GPL-MVCHNCGGRGHLAYECPSGR 252
+ C C HM++DCM G + C+ CG GH++ +C + R
Sbjct: 92 VSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQNDR 135
>ASPGD|ASPL0000040986 [details] [associations]
symbol:AN9093 species:162425 "Emericella nidulans"
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
OMA:QAGHISR Uniprot:C8VH53
Length = 233
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 60/162 (37%), Positives = 76/162 (46%)
Query: 46 LCKNCKRPGHFARECPNVAI-----CHNC-GLPGHIASECTTKAL------CWNCREPGH 93
LC NCK+PGH + CP C+NC GL GH+ ++C T L C+NC +PGH
Sbjct: 27 LCYNCKQPGHESSSCPRPRTTETKQCYNCQGL-GHVQADCPTLRLNGANGRCYNCSQPGH 85
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQG---HFAADC-TNDKAC 149
+A NCP G R G CYK G HFA DC C
Sbjct: 86 LARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAMKC 145
Query: 150 NNCRKTGHLARDC--PND-P------ICNLCNVSGHVARHCP 182
C K GH++RDC PN P +C C+ +GH++R CP
Sbjct: 146 YACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCP 187
Score = 206 (77.6 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 50/152 (32%), Positives = 68/152 (44%)
Query: 47 CKNCKRPGHFARECPNVA-ICHNCGLPGHIASEC----TTKAL-CWNCREPGHMAGNCPN 100
C C GH+A C + +C+NC PGH +S C TT+ C+NC+ GH+ +CP
Sbjct: 8 CYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPT 67
Query: 101 ------EGICHTCGKAGHRARDCTAP----PLPPGDLRLCNNCYKQGHFAADCTNDKACN 150
G C+ C + GH AR+C AP P G R +G + C
Sbjct: 68 LRLNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGG-YPRAATCY 126
Query: 151 NCRKTGHLARDCPNDPI-CNLCNVSGHVARHC 181
C H ARDC + C C GH++R C
Sbjct: 127 KCGGPNHFARDCQAQAMKCYACGKLGHISRDC 158
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 48/162 (29%), Positives = 66/162 (40%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC-----TNDKACNNCRKTGHL 158
C+ CG GH A C++ RLC NC + GH ++ C T K C NC+ GH+
Sbjct: 8 CYKCGNIGHYAEVCSSSE------RLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHV 61
Query: 159 ARDCPNDPI------CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXX-X 211
DCP + C C+ GH+AR+CP
Sbjct: 62 QADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPR 121
Query: 212 XIVCRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC--PSG 251
C C H +RDC M C+ CG GH++ +C P+G
Sbjct: 122 AATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 163
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/116 (37%), Positives = 56/116 (48%)
Query: 47 CKNCKRPGHFARECPNVA--ICHNCGLP-GHIASECT-------TKALCWNCREPGHMAG 96
C NC +PGH AR CP A G P G A C+ C P H A
Sbjct: 77 CYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFAR 136
Query: 97 NCPNEGI-CHTCGKAGHRARDCTAP---PLPPGDLRLCNNCYKQGHFAADCTNDKA 148
+C + + C+ CGK GH +RDCTAP PL ++C C + GH + DC N++A
Sbjct: 137 DCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAG-KVCYKCSQAGHISRDCPNNEA 191
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 52/181 (28%), Positives = 67/181 (37%)
Query: 66 CHNCGLPGHIASECTT-KALCWNCREPGHMAGNCPNEGI-----CHTCGKAGHRARDCTA 119
C+ CG GH A C++ + LC+NC++PGH + +CP C+ C GH DC
Sbjct: 8 CYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPT 67
Query: 120 PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDC-----------PNDPIC 168
L + R C NC + GH A +C A R TG P C
Sbjct: 68 LRLNGANGR-CYNCSQPGHLARNCPAP-ASGAPRGTGAPRGGFGGGFRGGYGGYPRAATC 125
Query: 169 NLCNVSGHVARHCP-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNCQQLGHMSRD 227
C H AR C + VC C Q GH+SRD
Sbjct: 126 YKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRD 185
Query: 228 C 228
C
Sbjct: 186 C 186
Score = 156 (60.0 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 31/90 (34%), Positives = 44/90 (48%)
Query: 81 TKALCWNCREPGHMAGNCPN-EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHF 139
++ C+ C GH A C + E +C+ C + GH + C P + + C NC GH
Sbjct: 4 SRRACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTT--ETKQCYNCQGLGHV 61
Query: 140 AADCTN------DKACNNCRKTGHLARDCP 163
ADC + C NC + GHLAR+CP
Sbjct: 62 QADCPTLRLNGANGRCYNCSQPGHLARNCP 91
Score = 105 (42.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 128 RLCNNCYKQGHFAADCTN-DKACNNCRKTGHLARDCPNDPI-----CNLCNVSGHVARHC 181
R C C GH+A C++ ++ C NC++ GH + CP C C GHV C
Sbjct: 6 RACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADC 65
Query: 182 P 182
P
Sbjct: 66 P 66
Score = 96 (38.9 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 215 CRNCQQLGHMSRDCM----GPLM----VCHNCGGRGHLAYECPS 250
C C +LGH+SRDC GPL VC+ C GH++ +CP+
Sbjct: 145 CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPN 188
>UNIPROTKB|B4DP17 [details] [associations]
symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
nucleic acid-binding protein" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
UCSC:uc011bku.2 Uniprot:B4DP17
Length = 160
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/158 (39%), Positives = 81/158 (51%)
Query: 44 SNLCKNCKRPGHFARECPNVA------------ICHNCGLPGHIASECTTKA-LCWNCRE 90
SN C C R GH+ARECP IC+ CG GH+A +C + C+NC
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCGR 62
Query: 91 PGHMAGNC--PN---EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTN 145
GH+A +C P E C+ CGK GH ARDC D + C +C + GH DCT
Sbjct: 63 GGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH-----ADEQKCYSCGEFGHIQKDCTK 117
Query: 146 DKACNNCRKTGHLARDCP--NDPICNLCNVSGHVARHC 181
K C C +TGH+A +C ++ C C SGH+AR C
Sbjct: 118 VK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 154
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 81 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 139
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 140 NCYRCGESGHLARECT 155
Score = 192 (72.6 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 48/128 (37%), Positives = 58/128 (45%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAG-NCPNEGICHTCGKAGHRARDCTAPPLPP 124
C CG GH A EC T G G IC+ CG++GH A+DC
Sbjct: 6 CFKCGRSGHWARECPTGG--------GRGRGMRSRGRDICYRCGESGHLAKDC------- 50
Query: 125 GDLR--LCNNCYKQGHFAADCTNDK-----ACNNCRKTGHLARDCPN--DPICNLCNVSG 175
DL+ C NC + GH A DC K C NC K GHLARDC + + C C G
Sbjct: 51 -DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 109
Query: 176 HVARHCPK 183
H+ + C K
Sbjct: 110 HIQKDCTK 117
Score = 123 (48.4 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 102 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 157
Score = 83 (34.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV-CHNCGGRGHLAYEC 248
+ C C + GH++ +C V C+ CG GHLA EC
Sbjct: 118 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 154
>CGD|CAL0002417 [details] [associations]
symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
stress" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 53/159 (33%), Positives = 75/159 (47%)
Query: 43 QSNLCKNCKRPGHFARECP----NVAI-CHNCGLPGHIASECTTKAL---CWNCREPGHM 94
+ LC NC +PGH + +CP N A C++CG GHI +EC +A C+NC + GH+
Sbjct: 25 EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHI 84
Query: 95 AGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQG---HFAADC-TNDKACN 150
+ NC + A + + P G CYK G HFA DC N C
Sbjct: 85 SKNCDS---------APSSTNNAPSFKRPSGRAS-GTTCYKCGGPNHFARDCQANTVKCY 134
Query: 151 NCRKTGHLARDCPNDP--------ICNLCNVSGHVARHC 181
C K GH+++DC + C C SGH+++ C
Sbjct: 135 ACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 205 (77.2 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 47 CKNCKRPGHFARECPNVA-ICHNCGLPGHIASEC-----TTKALCWNCREPGHMAGNCPN 100
C C GH A +C +C+NC PGH +++C T C++C + GH+ CPN
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPN 68
Query: 101 E--GI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGH 157
+ G C+ CG+ GH +++C + P + +K+ A T C C H
Sbjct: 69 QAQGAKCYNCGQFGHISKNCDSAPSSTNNAP----SFKRPSGRASGTT---CYKCGGPNH 121
Query: 158 LARDCPNDPI-CNLCNVSGHVARHC 181
ARDC + + C C GH+++ C
Sbjct: 122 FARDCQANTVKCYACGKVGHISKDC 146
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 44/169 (26%), Positives = 67/169 (39%)
Query: 66 CHNCGLPGHIASECTTKA-LCWNCREPGHMAGNCPNEGI-----CHTCGKAGHRARDCTA 119
C+ CG GH+A +C + LC+NC +PGH + +CP+ C++CG GH +C
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC-- 66
Query: 120 PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVAR 179
P G C NC + GH + +C + + N + + C C H AR
Sbjct: 67 PNQAQG--AKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFAR 124
Query: 180 HCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNCQQLGHMSRDC 228
C C NC + GH+S++C
Sbjct: 125 DCQANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/155 (28%), Positives = 63/155 (40%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKA-----CNNCRKTGHL 158
C+ CG+ GH A DC + RLC NC+K GH + DC + K C +C GH+
Sbjct: 9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 159 ARDCPNDPI---CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVC 215
+CPN C C GH++++C C
Sbjct: 63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTT---------C 113
Query: 216 RNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C H +RDC + C+ CG GH++ +C S
Sbjct: 114 YKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 43 QSNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
Q C NC + GH ++ C + N S + C+ C P H A +C
Sbjct: 71 QGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQANT 130
Query: 103 I-CHTCGKAGHRARDCTAPPLPPG-DLRLCNNCYKQGHFAADCT 144
+ C+ CGK GH ++DC + + C NC K GH + +CT
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 47 CKNCKRPGHFARECP-NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICH 105
C C P HFAR+C N C+ CG GHI+ +C + A G+ + C+
Sbjct: 113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHSSA-----------GGSNFSAKTCY 161
Query: 106 TCGKAGHRARDCTA 119
CGK+GH +++CTA
Sbjct: 162 NCGKSGHISKECTA 175
Score = 121 (47.7 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 128 RLCNNCYKQGHFAADCTND-KACNNCRKTGHLARDCPNDPI------CNLCNVSGHVARH 180
R C C + GH A DC + + C NC K GH + DCP DP C C GH+
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCP-DPKQNTAKQCYSCGDVGHIQTE 65
Query: 181 CP 182
CP
Sbjct: 66 CP 67
Score = 83 (34.3 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 213 IVCRNCQQLGHMSRDCMGPL-------MVCHNCGGRGHLAYEC 248
+ C C ++GH+S+DC C+NCG GH++ EC
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
>UNIPROTKB|Q59YJ9 [details] [associations]
symbol:GIS2 "Putative uncharacterized protein GIS2"
species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 53/159 (33%), Positives = 75/159 (47%)
Query: 43 QSNLCKNCKRPGHFARECP----NVAI-CHNCGLPGHIASECTTKAL---CWNCREPGHM 94
+ LC NC +PGH + +CP N A C++CG GHI +EC +A C+NC + GH+
Sbjct: 25 EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHI 84
Query: 95 AGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQG---HFAADC-TNDKACN 150
+ NC + A + + P G CYK G HFA DC N C
Sbjct: 85 SKNCDS---------APSSTNNAPSFKRPSGRAS-GTTCYKCGGPNHFARDCQANTVKCY 134
Query: 151 NCRKTGHLARDCPNDP--------ICNLCNVSGHVARHC 181
C K GH+++DC + C C SGH+++ C
Sbjct: 135 ACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 205 (77.2 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 47 CKNCKRPGHFARECPNVA-ICHNCGLPGHIASEC-----TTKALCWNCREPGHMAGNCPN 100
C C GH A +C +C+NC PGH +++C T C++C + GH+ CPN
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPN 68
Query: 101 E--GI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGH 157
+ G C+ CG+ GH +++C + P + +K+ A T C C H
Sbjct: 69 QAQGAKCYNCGQFGHISKNCDSAPSSTNNAP----SFKRPSGRASGTT---CYKCGGPNH 121
Query: 158 LARDCPNDPI-CNLCNVSGHVARHC 181
ARDC + + C C GH+++ C
Sbjct: 122 FARDCQANTVKCYACGKVGHISKDC 146
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 44/169 (26%), Positives = 67/169 (39%)
Query: 66 CHNCGLPGHIASECTTKA-LCWNCREPGHMAGNCPNEGI-----CHTCGKAGHRARDCTA 119
C+ CG GH+A +C + LC+NC +PGH + +CP+ C++CG GH +C
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC-- 66
Query: 120 PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVAR 179
P G C NC + GH + +C + + N + + C C H AR
Sbjct: 67 PNQAQG--AKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFAR 124
Query: 180 HCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNCQQLGHMSRDC 228
C C NC + GH+S++C
Sbjct: 125 DCQANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/155 (28%), Positives = 63/155 (40%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKA-----CNNCRKTGHL 158
C+ CG+ GH A DC + RLC NC+K GH + DC + K C +C GH+
Sbjct: 9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 159 ARDCPNDPI---CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVC 215
+CPN C C GH++++C C
Sbjct: 63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTT---------C 113
Query: 216 RNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C H +RDC + C+ CG GH++ +C S
Sbjct: 114 YKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 43 QSNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
Q C NC + GH ++ C + N S + C+ C P H A +C
Sbjct: 71 QGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQANT 130
Query: 103 I-CHTCGKAGHRARDCTAPPLPPG-DLRLCNNCYKQGHFAADCT 144
+ C+ CGK GH ++DC + + C NC K GH + +CT
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 47 CKNCKRPGHFARECP-NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICH 105
C C P HFAR+C N C+ CG GHI+ +C + A G+ + C+
Sbjct: 113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHSSA-----------GGSNFSAKTCY 161
Query: 106 TCGKAGHRARDCTA 119
CGK+GH +++CTA
Sbjct: 162 NCGKSGHISKECTA 175
Score = 121 (47.7 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 128 RLCNNCYKQGHFAADCTND-KACNNCRKTGHLARDCPNDPI------CNLCNVSGHVARH 180
R C C + GH A DC + + C NC K GH + DCP DP C C GH+
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCP-DPKQNTAKQCYSCGDVGHIQTE 65
Query: 181 CP 182
CP
Sbjct: 66 CP 67
Score = 83 (34.3 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 213 IVCRNCQQLGHMSRDCMGPL-------MVCHNCGGRGHLAYEC 248
+ C C ++GH+S+DC C+NCG GH++ EC
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
>TAIR|locus:2135139 [details] [associations]
symbol:CSDP1 "cold shock domain protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IGI;IEP] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] [GO:0009631 "cold acclimation" evidence=IGI]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001878 InterPro:IPR002059 InterPro:IPR011129
Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050 PROSITE:PS50158
SMART:SM00343 SMART:SM00357 Prosite:PS00352 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0009651 GO:GO:0009414 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 EMBL:AL161588 GO:GO:0003690
GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL022373
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 GO:GO:0010501
EMBL:AK226815 IPI:IPI00525206 PIR:T05494 RefSeq:NP_195326.1
UniGene:At.23073 HSSP:P15277 ProteinModelPortal:O65639 SMR:O65639
STRING:O65639 PaxDb:O65639 PRIDE:O65639 EnsemblPlants:AT4G36020.1
GeneID:829758 KEGG:ath:AT4G36020 TAIR:At4g36020 eggNOG:COG1278
InParanoid:O65639 OMA:GRACYNC PhylomeDB:O65639
ProtClustDB:CLSN2685328 Genevestigator:O65639 GO:GO:0032508
Uniprot:O65639
Length = 299
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 50/139 (35%), Positives = 59/139 (42%)
Query: 47 CKNCKRPGHFARECPNVAI---------------CHNCGLPGHIASECTTKALCWNCREP 91
C C GH AR+C ++ C+ CG GH A +CT K N R
Sbjct: 166 CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSG 225
Query: 92 GHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT------- 144
G G+ G C++CG GH ARDC P R C C GH A DC
Sbjct: 226 G--GGS----GTCYSCGGVGHIARDCATKRQPS---RGCYQCGGSGHLARDCDQRGSGGG 276
Query: 145 -NDKACNNCRKTGHLARDC 162
ND AC C K GH AR+C
Sbjct: 277 GNDNACYKCGKEGHFAREC 295
Score = 191 (72.3 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 54/156 (34%), Positives = 65/156 (41%)
Query: 47 CKNCKRPGHFARECP-------------NVAICHNCGLPGHIASECTTKALCWNCREPGH 93
C NC GH +++C C+NCG GH A +CT+ N + G
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAG---NGDQRGA 158
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRL--------CNNCYKQGHFAADCTN 145
G N+G C+TCG GH ARDCT + GD R C C GHFA DCT
Sbjct: 159 TKGG--NDG-CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQ 215
Query: 146 DKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHC 181
A N R G C C GH+AR C
Sbjct: 216 KVAAGNVRSGGG------GSGTCYSCGGVGHIARDC 245
Score = 157 (60.3 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 36/105 (34%), Positives = 51/105 (48%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNC-----PNE 101
C C GHFAR+C G++ S C++C GH+A +C P+
Sbjct: 200 CYTCGDVGHFARDCTQKVAA------GNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSR 253
Query: 102 GICHTCGKAGHRARDCTAPPLPPG-DLRLCNNCYKQGHFAADCTN 145
G C+ CG +GH ARDC G + C C K+GHFA +C++
Sbjct: 254 G-CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSS 297
Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/144 (31%), Positives = 59/144 (40%)
Query: 66 CHNCGLPGHIASECTTKAL---------------CWNCREPGHMAGNCPNE--------- 101
C+ CG GH+A +CT K++ C+ C + GH A +C +
Sbjct: 166 CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSG 225
Query: 102 ----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGH 157
G C++CG GH ARDC P R C C GH A DC D+ R +G
Sbjct: 226 GGGSGTCYSCGGVGHIARDCATKRQPS---RGCYQCGGSGHLARDC--DQ-----RGSGG 275
Query: 158 LARDCPNDPICNLCNVSGHVARHC 181
ND C C GH AR C
Sbjct: 276 GG----NDNACYKCGKEGHFAREC 295
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 44 SNLCKNCKRPGHFAREC-----PNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNC 98
S C +C GH AR+C P+ C+ CG GH+A +C + +G
Sbjct: 229 SGTCYSCGGVGHIARDCATKRQPSRG-CYQCGGSGHLARDCDQRG-----------SGGG 276
Query: 99 PNEGICHTCGKAGHRARDCTA 119
N+ C+ CGK GH AR+C++
Sbjct: 277 GNDNACYKCGKEGHFARECSS 297
Score = 97 (39.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 215 CRNCQQLGHMSRDCMG---PLMVCHNCGGRGHLAYEC 248
C +C +GH++RDC P C+ CGG GHLA +C
Sbjct: 232 CYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDC 268
Score = 78 (32.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 215 CRNCQQLGHMSRDCM-------GPLMVCHNCGGRGHLAYECPS 250
C C GH++RDC G C+ CG GH A EC S
Sbjct: 255 CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSS 297
>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
symbol:cnbpb "CCHC-type zinc finger, nucleic acid
binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
Length = 243
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 58/159 (36%), Positives = 78/159 (49%)
Query: 44 SNLCKNCKRPGHFARECPNVA-------------ICHNCGLPGHIASECT-TKALCWNCR 89
SN C C R GH+ + CPN C+ CG PGH+A +C T+ C+NC
Sbjct: 85 SNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDACYNCG 144
Query: 90 EPGHMAGNC--PN---EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT 144
GH++ +C P E +C+ CGKAGH ARDC + + C +C GH C
Sbjct: 145 RGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDH-----ANEQKCYSCGGFGHIQKGCE 199
Query: 145 NDKACNNCRKTGHLARDCP--NDPICNLCNVSGHVARHC 181
K C C + GH+A C ++ C C SGHVA+ C
Sbjct: 200 KVK-CYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKEC 237
Score = 193 (73.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 46/129 (35%), Positives = 57/129 (44%)
Query: 75 IASECTTKALCWNCREPGHMAGNCPNEG-------------ICHTCGKAGHRARDCTAPP 121
+ SE + C+ C GH NCPN G C+ CG+ GH ARDC
Sbjct: 78 VKSEDMSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE 137
Query: 122 LPPGDLRLCNNCYKQGHFAADCTNDK-----ACNNCRKTGHLARDCP--NDPICNLCNVS 174
D C NC + GH + DC K C NC K GH+ARDC N+ C C
Sbjct: 138 ----DA--CYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGF 191
Query: 175 GHVARHCPK 183
GH+ + C K
Sbjct: 192 GHIQKGCEK 200
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 24 DRFSYRDAPXXXXXXXXXXQSNLCKNCKRPGHFAREC--PNVA---ICHNCGLPGHIASE 78
D F YR + C NC R GH +R+C P +C+NCG GH+A +
Sbjct: 117 DLFCYRCGEPGHVARDCERTEDACYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARD 176
Query: 79 C--TTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQ 136
C + C++C GH+ C C+ CG+ GH A C+ ++ C NC K
Sbjct: 177 CDHANEQKCYSCGGFGHIQKGCEKVK-CYRCGEIGHVAVQCSKA----SEVN-CYNCGKS 230
Query: 137 GHFAADCT 144
GH A +CT
Sbjct: 231 GHVAKECT 238
Score = 114 (45.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT--TKALCWNCREPGHMAGNCPNE 101
C +C GH + C V C+ CG GH+A +C+ ++ C+NC + GH+A C E
Sbjct: 185 CYSCGGFGHIQKGCEKVK-CYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKECTIE 240
Score = 88 (36.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV-CHNCGGRGHLAYEC 248
+ C C ++GH++ C V C+NCG GH+A EC
Sbjct: 201 VKCYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKEC 237
>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
symbol:cnbpa "CCHC-type zinc finger, nucleic acid
binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060322 "head development" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
"neural crest cell fate specification" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
ArrayExpress:Q801Z9 Uniprot:Q801Z9
Length = 163
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/156 (35%), Positives = 74/156 (47%)
Query: 47 CKNCKRPGHFARECPNVA-------------ICHNCGLPGHIASECT-TKALCWNCREPG 92
C C R GH+ + CPN C+ CG GHIA +C T+ C+NC G
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 67
Query: 93 HMAGNC--PN---EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDK 147
H++ +C P E C+ CGKAGH ARDC + + C +C GHF C K
Sbjct: 68 HISRDCKEPKKEREQCCYNCGKAGHVARDCDH-----ANEQKCYSCGGFGHFQKLCDKVK 122
Query: 148 ACNNCRKTGHLARDCPN--DPICNLCNVSGHVARHC 181
C C + GH+A C + C C +GH+AR C
Sbjct: 123 -CYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157
Score = 191 (72.3 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 44/119 (36%), Positives = 53/119 (44%)
Query: 85 CWNCREPGHMAGNCPNEG-------------ICHTCGKAGHRARDCTAPPLPPGDLRLCN 131
C+ C GH NCPN G C+ CG+ GH ARDC D C
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE----DA--CY 61
Query: 132 NCYKQGHFAADCTNDK-----ACNNCRKTGHLARDCP--NDPICNLCNVSGHVARHCPK 183
NC++ GH + DC K C NC K GH+ARDC N+ C C GH + C K
Sbjct: 62 NCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDK 120
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 24 DRFSYRDAPXXXXXXXXXXQSNLCKNCKRPGHFAREC--PNVA---ICHNCGLPGHIASE 78
D F YR + C NC R GH +R+C P C+NCG GH+A +
Sbjct: 37 DLFCYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARD 96
Query: 79 C--TTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQ 136
C + C++C GH C ++ C+ CG+ GH A C+ ++ C NC K
Sbjct: 97 CDHANEQKCYSCGGFGHFQKLC-DKVKCYRCGEIGHVAVQCSKAT----EVN-CYNCGKT 150
Query: 137 GHFAADCT 144
GH A DC+
Sbjct: 151 GHLARDCS 158
Score = 125 (49.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT--TKALCWNCREPGHMAGNCPNE 101
C +C GHF + C V C+ CG GH+A +C+ T+ C+NC + GH+A +C E
Sbjct: 105 CYSCGGFGHFQKLCDKVK-CYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDCSIE 160
Score = 103 (41.3 bits), Expect = 0.00042, P = 0.00042
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 215 CRNCQQLGHMSRDCMGPL----MVCHNCGGRGHLAYEC 248
C NC + GH+SRDC P C+NCG GH+A +C
Sbjct: 60 CYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 97
Score = 89 (36.4 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV-CHNCGGRGHLAYEC 248
+ C C ++GH++ C V C+NCG GHLA +C
Sbjct: 121 VKCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157
>UNIPROTKB|G4N4A8 [details] [associations]
symbol:MGG_05948 "Zinc knuckle domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CM001233 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
RefSeq:XP_003711783.1 ProteinModelPortal:G4N4A8
EnsemblFungi:MGG_05948T0 GeneID:2684027 KEGG:mgr:MGG_05948
Uniprot:G4N4A8
Length = 199
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 51/166 (30%), Positives = 70/166 (42%)
Query: 85 CWNCREPGHMAGNCPNEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAAD 142
C+ C +P H A +CPN G C+ CG GH +R C P P D ++C C + GH + D
Sbjct: 16 CYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRAC---PEEPKDQKICYRCSQPGHISRD 72
Query: 143 CTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXX 202
C + A G + C C GH+AR+C K
Sbjct: 73 CPSGGAGGGGGGGGGQSSGAE----CYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYG 128
Query: 203 XXXXXXXXXXIVCRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC 248
C +C +GHMSRDC+ C+NCG GH + +C
Sbjct: 129 GGYGGGAGGK-TCYSCGGVGHMSRDCVNGSK-CYNCGETGHFSRDC 172
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 46/144 (31%), Positives = 63/144 (43%)
Query: 46 LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICH 105
+C C +PGH +R+CP+ G G ++ A C+ C E GH+A NC G
Sbjct: 59 ICYRCSQPGHISRDCPS----GGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGG 114
Query: 106 TCGKAGHRARDCTAPPLPPGDL--RLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP 163
G G+ G + C +C GH + DC N C NC +TGH +RDC
Sbjct: 115 G-GGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSRDCVNGSKCYNCGETGHFSRDCS 173
Query: 164 N-----DPICNLCNVSGHVARHCP 182
+ +C C GHV CP
Sbjct: 174 KRSTTGEKMCYKCQQPGHVQAECP 197
Score = 189 (71.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 45/144 (31%), Positives = 62/144 (43%)
Query: 47 CKNCKRPGHFARECP----NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
C NC GH +R CP + IC+ C PGHI+ +C + G G +
Sbjct: 37 CYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCPSGGAGGG----GGGGGGQSSGA 92
Query: 103 ICHTCGKAGHRARDCTAPPLPPGD---LRLCNNCYKQGHFAADCTNDKACNNCRKTGHLA 159
C+ CG+ GH AR+C+ G Y G+ K C +C GH++
Sbjct: 93 ECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGG--AGGKTCYSCGGVGHMS 150
Query: 160 RDCPNDPICNLCNVSGHVARHCPK 183
RDC N C C +GH +R C K
Sbjct: 151 RDCVNGSKCYNCGETGHFSRDCSK 174
Score = 160 (61.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 47 CKNCKRPGHFARECPN--VAICHNCGLPGHIASECTTKA----LCWNCREPGHMAGNCPN 100
C C +P H AR+CPN A C+NCG GHI+ C + +C+ C +PGH++ +CP+
Sbjct: 16 CYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCPS 75
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDL-RLCNNCYKQGH 138
G G G + A G++ + NC K G+
Sbjct: 76 GGAGG--GGGGGGGQSSGAECYKCGEVGHIARNCSKGGY 112
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 64 AICHNCGLPGHIASECTTKALC------WNCREPGHMAGNCPNEG--ICHTCGKAGHRAR 115
A C+ CG GHIA C+ ++ G+ G G C++CG GH +R
Sbjct: 92 AECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSR 151
Query: 116 DCTAPPLPPGDLRLCNNCYKQGHFAADC-----TNDKACNNCRKTGHLARDCPND 165
DC G C NC + GHF+ DC T +K C C++ GH+ +CPN+
Sbjct: 152 DCVN-----GSK--CYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHVQAECPNN 199
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKA-----LCWNCREPGHMAGNCPN 100
C +C GH +R+C N + C+NCG GH + +C+ ++ +C+ C++PGH+ CPN
Sbjct: 140 CYSCGGVGHMSRDCVNGSKCYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHVQAECPN 198
Score = 135 (52.6 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 128 RLCNNCYKQGHFAADCTNDKA--CNNCRKTGHLARDCPNDP----ICNLCNVSGHVARHC 181
R C C + H A DC N A C NC GH++R CP +P IC C+ GH++R C
Sbjct: 14 RTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDC 73
Query: 182 P 182
P
Sbjct: 74 P 74
Score = 91 (37.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 147 KACNNCRKTGHLARDCPNDPI--CNLCNVSGHVARHCPK 183
+ C C + H ARDCPN C C GH++R CP+
Sbjct: 14 RTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPE 52
Score = 88 (36.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 215 CRNCQQLGHMSRDCM-----GPLMVCHNCGGRGHLAYECPS 250
C NC + GH SRDC G M C+ C GH+ ECP+
Sbjct: 159 CYNCGETGHFSRDCSKRSTTGEKM-CYKCQQPGHVQAECPN 198
Score = 71 (30.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 214 VCRNCQQLGHMSRDC-MGPL-------------MVCHNCGGRGHLAYECPSGRF 253
+C C Q GH+SRDC G C+ CG GH+A C G +
Sbjct: 59 ICYRCSQPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGY 112
Score = 61 (26.5 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 235 CHNCGGRGHLAYECPSG 251
C++CGG GH++ +C +G
Sbjct: 140 CYSCGGVGHMSRDCVNG 156
Score = 49 (22.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 214 VCRNCQQLGHMSRDC 228
+C CQQ GH+ +C
Sbjct: 182 MCYKCQQPGHVQAEC 196
>UNIPROTKB|F1N8C2 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
ArrayExpress:F1N8C2 Uniprot:F1N8C2
Length = 171
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 56/148 (37%), Positives = 77/148 (52%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLP--GHIASECTTKAL---CWNCREPGHMAGNC 98
SN C C R GH+ARECP I G+ G + + +L C+ C E GH+A +C
Sbjct: 3 SNECFKCGRTGHWARECPT-GIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 99 P-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRKT 155
E C+ CG+ GH A+DC P + C NC K GH A DC +++ C +C +
Sbjct: 62 DLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEF 119
Query: 156 GHLARDCPNDPICNLCNVSGHVARHCPK 183
GH+ +DC C C +GHVA +C K
Sbjct: 120 GHIQKDCTKVK-CYRCGETGHVAINCSK 146
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 47 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 106
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 107 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 160
Query: 177 VARHC 181
+AR C
Sbjct: 161 LAREC 165
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 46 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 106 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 157
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 158 SGHLAREC 165
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 92 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 150
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 151 NCYRCGESGHLARECT 166
Score = 123 (48.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 113 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 168
>UNIPROTKB|G4MRA3 [details] [associations]
symbol:MGG_13778 "Zinc finger protein GIS2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:CM001231 KO:K09250 RefSeq:XP_003710840.1
ProteinModelPortal:G4MRA3 EnsemblFungi:MGG_13778T0 GeneID:5048998
KEGG:mgr:MGG_13778 Uniprot:G4MRA3
Length = 230
Score = 175 (66.7 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 49/151 (32%), Positives = 66/151 (43%)
Query: 46 LCKNCKRPGHFARECP-----NVAICHNC-GLPGHIASECTTKAL--------CWNCREP 91
LC NCK+PGH + CP C++C GL GH+ ++C T L C++C +P
Sbjct: 28 LCYNCKQPGHESNGCPLPRTTEAKQCYHCQGL-GHVQADCPTLRLSGAGSNGRCYSCGQP 86
Query: 92 GHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
GH+A CPN + G A P+P G +G FA C
Sbjct: 87 GHLARACPNPNGANM----GRGA------PVPRGGYG--GGYGGRGGFAGGA-RPATCYK 133
Query: 152 CRKTGHLARDCPNDPI-CNLCNVSGHVARHC 181
C H ARDC + C C GH++R C
Sbjct: 134 CGGPNHFARDCQAQAMKCYACGKLGHISRDC 164
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 49/158 (31%), Positives = 66/158 (41%)
Query: 43 QSNLCKNCKRPGHFARECPNVAI--------CHNCGLPGHIASECTTKALCWNCREPGHM 94
++ C +C+ GH +CP + + C++CG PGH+A C N G
Sbjct: 49 EAKQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNP----NGANMGRG 104
Query: 95 AGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC-TNDKACNNCR 153
A P G G G+ R A P C C HFA DC C C
Sbjct: 105 AP-VPRGGY----G-GGYGGRGGFAGGARPAT---CYKCGGPNHFARDCQAQAMKCYACG 155
Query: 154 KTGHLARDC--PND-PI------CNLCNVSGHVARHCP 182
K GH++RDC PN P+ C C +GH++R CP
Sbjct: 156 KLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCP 193
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 40/121 (33%), Positives = 53/121 (43%)
Query: 47 CKNCKRPGHFARECPNVAICH-NCGLP-------------GHIASECTTKALCWNCREPG 92
C +C +PGH AR CPN + G P G A A C+ C P
Sbjct: 80 CYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARP-ATCYKCGGPN 138
Query: 93 HMAGNCPNEGI-CHTCGKAGHRARDCTAPPLPPGDL--RLCNNCYKQGHFAADCTNDKAC 149
H A +C + + C+ CGK GH +RDCTAP P + + C C + GH + C
Sbjct: 139 HFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCPTKATA 198
Query: 150 N 150
N
Sbjct: 199 N 199
Score = 158 (60.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 47 CKNCKRPGHFARECPNVA-ICHNCGLPGHIASEC----TTKAL-CWNCREPGHMAGNCP- 99
C C GH+A C + +C+NC PGH ++ C TT+A C++C+ GH+ +CP
Sbjct: 9 CYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPT 68
Query: 100 -------NEGICHTCGKAGHRARDCTAP 120
+ G C++CG+ GH AR C P
Sbjct: 69 LRLSGAGSNGRCYSCGQPGHLARACPNP 96
Score = 157 (60.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 33/92 (35%), Positives = 44/92 (47%)
Query: 66 CHNCGLPGHIASECTT-KALCWNCREPGHMAGNCP----NEGI-CHTCGKAGHRARDCTA 119
C+ CG GH A C++ + LC+NC++PGH + CP E C+ C GH DC
Sbjct: 9 CYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPT 68
Query: 120 PPLP-PGDLRLCNNCYKQGHFAADCTNDKACN 150
L G C +C + GH A C N N
Sbjct: 69 LRLSGAGSNGRCYSCGQPGHLARACPNPNGAN 100
Score = 150 (57.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 81 TKALCWNCREPGHMAGNCPN-EGICHTCGKAGHRARDCTAPPLP-PGDLRLCNNCYKQGH 138
++ C+ C GH A C + E +C+ C + GH + C PLP + + C +C GH
Sbjct: 5 SRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGC---PLPRTTEAKQCYHCQGLGH 61
Query: 139 FAADCT--------NDKACNNCRKTGHLARDCPNDPICNL 170
ADC ++ C +C + GHLAR CPN N+
Sbjct: 62 VQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANM 101
Score = 134 (52.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 64 AICHNCGLPGHIASECTTKAL-CWNCREPGHMAGNC--PNEG-------ICHTCGKAGHR 113
A C+ CG P H A +C +A+ C+ C + GH++ +C PN G C+ CG+AGH
Sbjct: 129 ATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHI 188
Query: 114 ARDCTAPPLPPGD 126
+R C GD
Sbjct: 189 SRQCPTKATANGD 201
Score = 124 (48.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 47 CKNCKRPGHFARECPNVAI-CHNCGLPGHIASECTTK---------ALCWNCREPGHMAG 96
C C P HFAR+C A+ C+ CG GHI+ +CT C+ C E GH++
Sbjct: 131 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISR 190
Query: 97 NCPNEGICHTCGKAGHRARDCTAPPLP 123
CP + + A A + P+P
Sbjct: 191 QCPTKATANGDSNAAAPAHNDA--PMP 215
Score = 104 (41.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 128 RLCNNCYKQGHFAADCTN-DKACNNCRKTGHLARDCP-----NDPICNLCNVSGHVARHC 181
R C C GH+A C++ ++ C NC++ GH + CP C C GHV C
Sbjct: 7 RACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 66
Query: 182 P 182
P
Sbjct: 67 P 67
Score = 98 (39.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 215 CRNCQQLGHMSRDCM----GPL----MVCHNCGGRGHLAYECPS 250
C C +LGH+SRDC GPL C+ CG GH++ +CP+
Sbjct: 151 CYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCPT 194
Score = 88 (36.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC--PSG 251
C C H +RDC M C+ CG GH++ +C P+G
Sbjct: 131 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 169
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 215 CRNCQQLGHMSRDCMGP 231
C +C Q GH++R C P
Sbjct: 80 CYSCGQPGHLARACPNP 96
>UNIPROTKB|O42395 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
ArrayExpress:O42395 Uniprot:O42395
Length = 172
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 55/149 (36%), Positives = 77/149 (51%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLP--GHIASECTTKAL---CWNCREPGHMAGNC 98
SN C C R GH+ARECP I G+ G + + +L C+ C E GH+A +C
Sbjct: 3 SNECFKCGRTGHWARECPT-GIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 99 P--NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ C+ CG+ GH A+DC P + C NC K GH A DC +++ C +C +
Sbjct: 62 DLQEDKACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGE 119
Query: 155 TGHLARDCPNDPICNLCNVSGHVARHCPK 183
GH+ +DC C C +GHVA +C K
Sbjct: 120 FGHIQKDCTKVK-CYRCGETGHVAINCSK 147
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 51/126 (40%), Positives = 68/126 (53%)
Query: 65 ICHNCGLPGHIASECTTKA--LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDC 117
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 47 ICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Query: 118 TAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSG 175
D + C +C + GH DCT K C C +TGH+A +C ++ C C SG
Sbjct: 107 DH-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 176 HVARHC 181
H+AR C
Sbjct: 161 HLAREC 166
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 47/129 (36%), Positives = 70/129 (54%)
Query: 45 NLCKNCKRPGHFARECP--NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGN 97
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +
Sbjct: 46 DICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 105
Query: 98 CPN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCR 153
C + E C++CG+ GH +DCT C C + GH A +C T++ C C
Sbjct: 106 CDHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCG 157
Query: 154 KTGHLARDC 162
++GHLAR+C
Sbjct: 158 ESGHLAREC 166
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 93 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 151
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 152 NCYRCGESGHLARECT 167
Score = 123 (48.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 114 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 169
>UNIPROTKB|J9NRQ2 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
Length = 146
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 55/147 (37%), Positives = 74/147 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLPGH-IASECTTKAL---CWNCREPGHMAGNCP 99
S C C R GH+AR CP V G G S C++ L C+ C + GH A NC
Sbjct: 3 SKECFRCGRSGHWARGCPRVGGSRGRGARGRGRGSPCSSTNLPDICYRCGKSGHHAKNCD 62
Query: 100 N-EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTN--DKACNNCRKTG 156
E IC+ CG++GH A+DC P + C C + GH A DC ++ C +C + G
Sbjct: 63 LLEDICYNCGRSGHIAKDCIEPKRERE--QCCYTCGRPGHLARDCDRQEEQKCYSCGEYG 120
Query: 157 HLARDCPNDPICNLCNVSGHVARHCPK 183
H+ +DC C C +GHVA +C K
Sbjct: 121 HIQKDCTQVK-CYRCGETGHVAINCSK 146
Score = 96 (38.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 214 VCRNCQQLGHMSRDCMGPL----MVCHNCGGRGHLAYEC 248
+C NC + GH+++DC+ P C+ CG GHLA +C
Sbjct: 67 ICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDC 105
Score = 86 (35.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 214 VCRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC 248
+C C + GH +++C +C+NCG GH+A +C
Sbjct: 47 ICYRCGKSGHHAKNCDLLEDICYNCGRSGHIAKDC 81
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC 248
C +C + GH+ +DC + C+ CG GH+A C
Sbjct: 113 CYSCGEYGHIQKDCTQ--VKCYRCGETGHVAINC 144
Score = 57 (25.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 145 NDKACNNCRKTGHLARDCP 163
+ K C C ++GH AR CP
Sbjct: 2 SSKECFRCGRSGHWARGCP 20
>UNIPROTKB|Q3T0Q6 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
NextBio:20866851 Uniprot:Q3T0Q6
Length = 170
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 54/147 (36%), Positives = 74/147 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLP----GHIASECTTKALCWNCREPGHMAGNCP 99
SN C C R GH+ARECP G+ G + +C+ C E GH+A +C
Sbjct: 3 SNECFKCGRSGHWARECPTGG-GRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 100 -NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRKTG 156
E C+ CG+ GH A+DC P + C NC K GH A DC +++ C +C + G
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFG 119
Query: 157 HLARDCPNDPICNLCNVSGHVARHCPK 183
H+ +DC C C +GHVA +C K
Sbjct: 120 HIQKDCTKVK-CYRCGETGHVAINCSK 145
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 46 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 105
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 106 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 159
Query: 177 VARHC 181
+AR C
Sbjct: 160 LAREC 164
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 45 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 105 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 156
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 157 SGHLAREC 164
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 149
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 150 NCYRCGESGHLARECT 165
Score = 123 (48.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 112 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 167
>UNIPROTKB|G3MZ41 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
Length = 175
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 56/140 (40%), Positives = 74/140 (52%)
Query: 54 GHFARECPNVA---ICHNCGLPGHIASECTT-KALCWNCREPGHMAGNC--PN-EG--IC 104
GH A +C + IC+ CG GH A +C +C+NC + GH+A +C P EG C
Sbjct: 38 GHGA-QCSSTTLPVICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCAEPKREGERCC 96
Query: 105 HTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP- 163
+TCG+ GH ARDC + R C +C K GH CT K C C + GH+A +C
Sbjct: 97 YTCGRPGHLARDCDRQ-----EERKCYSCGKSGHIQKYCTQVK-CYRCGEIGHVAINCRK 150
Query: 164 -NDPICNLCNVSGHVARHCP 182
N+ C C SGH+ R CP
Sbjct: 151 MNEVNCYRCGESGHLTRECP 170
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/147 (37%), Positives = 73/147 (49%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLPG--HIA--SECTTKALCWNCREPGHMAGNCP 99
S C C R GH+A C G G H A S T +C+ C + GH A +C
Sbjct: 7 SKECFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDCD 66
Query: 100 N-EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTN--DKACNNCRKTG 156
+ IC+ CGK+GH A+DC A P G+ R C C + GH A DC ++ C +C K+G
Sbjct: 67 LLDDICYNCGKSGHIAKDC-AEPKREGE-RCCYTCGRPGHLARDCDRQEERKCYSCGKSG 124
Query: 157 HLARDCPNDPICNLCNVSGHVARHCPK 183
H+ + C C C GHVA +C K
Sbjct: 125 HIQKYCTQVK-CYRCGEIGHVAINCRK 150
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 47/128 (36%), Positives = 69/128 (53%)
Query: 46 LCKNCKRPGHFARECPNVA-ICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNCP 99
+C C + GH+A++C + IC+NCG GHIA +C + C+ C PGH+A +C
Sbjct: 51 ICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCD 110
Query: 100 N--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT--NDKACNNCRKT 155
E C++CGK+GH + CT C C + GH A +C N+ C C ++
Sbjct: 111 RQEERKCYSCGKSGHIQKYCTQVK--------CYRCGEIGHVAINCRKMNEVNCYRCGES 162
Query: 156 GHLARDCP 163
GHL R+CP
Sbjct: 163 GHLTRECP 170
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT--TKALCWNCREPGHMAGNCPNE 101
C +C + GH + C V C+ CG GH+A C + C+ C E GH+ CP E
Sbjct: 117 CYSCGKSGHIQKYCTQVK-CYRCGEIGHVAINCRKMNEVNCYRCGESGHLTRECPIE 172
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC 248
++C C + GH ++DC +C+NCG GH+A +C
Sbjct: 50 VICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDC 85
Score = 93 (37.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 214 VCRNCQQLGHMSRDCMGPLM----VCHNCGGRGHLAYEC 248
+C NC + GH+++DC P C+ CG GHLA +C
Sbjct: 71 ICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 109
Score = 41 (19.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 145 NDKACNNCRKTGHLARDC 162
+ K C C + GH A C
Sbjct: 6 SSKECFKCGRVGHWAPAC 23
>UNIPROTKB|P62633 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
Ensembl:ENST00000451728 Ensembl:ENST00000502976
Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
Length = 177
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 113 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 177 VARHC 181
+AR C
Sbjct: 167 LAREC 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/153 (35%), Positives = 77/153 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACN 150
+A +C E C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120
Query: 151 NCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 SCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 152
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 52 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 112 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 163
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 164 SGHLAREC 171
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 156
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 157 NCYRCGESGHLARECT 172
Score = 123 (48.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 119 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 23/82 (28%), Positives = 31/82 (37%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DCMGPLMVCHNCGGRGHLAYEC 248
DC C+NCG GH+A +C
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDC 87
>UNIPROTKB|Q4R501 [details] [associations]
symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
human zinc finger protein 9 (a cellular retroviral nucleicacid
binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
Uniprot:Q4R501
Length = 177
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 113 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 177 VARHC 181
+AR C
Sbjct: 167 LAREC 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/153 (35%), Positives = 77/153 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACN 150
+A +C E C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120
Query: 151 NCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 SCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 152
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 52 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 112 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 163
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 164 SGHLAREC 171
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 156
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 157 NCYRCGESGHLARECT 172
Score = 123 (48.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 119 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 23/82 (28%), Positives = 31/82 (37%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DCMGPLMVCHNCGGRGHLAYEC 248
DC C+NCG GH+A +C
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDC 87
>UNIPROTKB|Q5R5R5 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
InParanoid:Q5R5R5 Uniprot:Q5R5R5
Length = 177
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 113 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 177 VARHC 181
+AR C
Sbjct: 167 LAREC 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/153 (35%), Positives = 77/153 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACN 150
+A +C E C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120
Query: 151 NCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 SCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 152
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 52 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 112 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 163
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 164 SGHLAREC 171
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 156
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 157 NCYRCGESGHLARECT 172
Score = 123 (48.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 119 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 23/82 (28%), Positives = 31/82 (37%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DCMGPLMVCHNCGGRGHLAYEC 248
DC C+NCG GH+A +C
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDC 87
>RGD|621807 [details] [associations]
symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 113 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 177 VARHC 181
+AR C
Sbjct: 167 LAREC 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/153 (35%), Positives = 77/153 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACN 150
+A +C E C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120
Query: 151 NCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 SCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 152
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 52 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 112 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 163
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 164 SGHLAREC 171
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 156
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 157 NCYRCGESGHLARECT 172
Score = 123 (48.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 119 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 23/82 (28%), Positives = 31/82 (37%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DCMGPLMVCHNCGGRGHLAYEC 248
DC C+NCG GH+A +C
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDC 87
>UNIPROTKB|P62634 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/125 (40%), Positives = 68/125 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSGH 176
D + C +C + GH DCT K C C +TGH+A +C ++ C C SGH
Sbjct: 113 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 177 VARHC 181
+AR C
Sbjct: 167 LAREC 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/153 (35%), Positives = 77/153 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACN 150
+A +C E C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120
Query: 151 NCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 SCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 152
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 52 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCRK 154
+ E C++CG+ GH +DCT C C + GH A +C T++ C C +
Sbjct: 112 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCGE 163
Query: 155 TGHLARDC 162
+GHLAR+C
Sbjct: 164 SGHLAREC 171
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 156
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 157 NCYRCGESGHLARECT 172
Score = 123 (48.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 119 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 174
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 23/82 (28%), Positives = 31/82 (37%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DCMGPLMVCHNCGGRGHLAYEC 248
DC C+NCG GH+A +C
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDC 87
>UNIPROTKB|E2RPD7 [details] [associations]
symbol:CNBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
Length = 179
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/130 (36%), Positives = 72/130 (55%)
Query: 45 NLCKNCKRPGHFARECP---NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAG 96
++C C GH A++C +V C+NCG GHIA +C + C+NC +PGH+A
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 111
Query: 97 NCPN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNC 152
+C + E C++CG+ GH +DCT C C + GH A +C T++ C C
Sbjct: 112 DCDHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRC 163
Query: 153 RKTGHLARDC 162
++GHLAR+C
Sbjct: 164 GESGHLAREC 173
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 51/127 (40%), Positives = 68/127 (53%)
Query: 65 ICHNCGLPGHIASECTTKA---LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARD 116
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARD
Sbjct: 53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112
Query: 117 CTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVS 174
C D + C +C + GH DCT K C C +TGH+A +C ++ C C S
Sbjct: 113 CDH-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGES 166
Query: 175 GHVARHC 181
GH+AR C
Sbjct: 167 GHLAREC 173
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/155 (35%), Positives = 78/155 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKA 148
+A +C E + C+ CG+ GH A+DC P + C NC K GH A DC +++
Sbjct: 63 LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQK 120
Query: 149 CNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
C +C + GH+ +DC C C +GHVA +C K
Sbjct: 121 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 154
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 100 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 158
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 159 NCYRCGESGHLARECT 174
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 121 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 176
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/84 (27%), Positives = 32/84 (38%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DC--MGPLMVCHNCGGRGHLAYEC 248
DC + C+NCG GH+A +C
Sbjct: 66 DCDLQEDVEACYNCGRGGHIAKDC 89
>UNIPROTKB|F8WFK2 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
Length = 179
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/130 (36%), Positives = 72/130 (55%)
Query: 45 NLCKNCKRPGHFARECP---NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAG 96
++C C GH A++C +V C+NCG GHIA +C + C+NC +PGH+A
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 111
Query: 97 NCPN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNC 152
+C + E C++CG+ GH +DCT C C + GH A +C T++ C C
Sbjct: 112 DCDHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRC 163
Query: 153 RKTGHLARDC 162
++GHLAR+C
Sbjct: 164 GESGHLAREC 173
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 51/127 (40%), Positives = 68/127 (53%)
Query: 65 ICHNCGLPGHIASECTTKA---LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARD 116
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARD
Sbjct: 53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112
Query: 117 CTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVS 174
C D + C +C + GH DCT K C C +TGH+A +C ++ C C S
Sbjct: 113 CDH-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGES 166
Query: 175 GHVARHC 181
GH+AR C
Sbjct: 167 GHLAREC 173
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/155 (35%), Positives = 78/155 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKA 148
+A +C E + C+ CG+ GH A+DC P + C NC K GH A DC +++
Sbjct: 63 LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQK 120
Query: 149 CNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
C +C + GH+ +DC C C +GHVA +C K
Sbjct: 121 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 154
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 100 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 158
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 159 NCYRCGESGHLARECT 174
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 121 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 176
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/84 (27%), Positives = 32/84 (38%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DC--MGPLMVCHNCGGRGHLAYEC 248
DC + C+NCG GH+A +C
Sbjct: 66 DCDLQEDVEACYNCGRGGHIAKDC 89
>MGI|MGI:88431 [details] [associations]
symbol:Cnbp "cellular nucleic acid binding protein"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
GermOnline:ENSMUSG00000030057 Uniprot:P53996
Length = 178
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 51/126 (40%), Positives = 68/126 (53%)
Query: 65 ICHNCGLPGHIASECTTKA--LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDC 117
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Query: 118 TAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP--NDPICNLCNVSG 175
D + C +C + GH DCT K C C +TGH+A +C ++ C C SG
Sbjct: 113 DH-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 176 HVARHC 181
H+AR C
Sbjct: 167 HLAREC 172
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/154 (35%), Positives = 77/154 (50%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIAS---ECTTKAL---CWNCREPGH 93
SN C C R GH+ARECP + G G + + + +L C+ C E GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 94 MAGNCP--NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKAC 149
+A +C + C+ CG+ GH A+DC P + C NC K GH A DC +++ C
Sbjct: 63 LAKDCDLQEDEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKC 120
Query: 150 NNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
+C + GH+ +DC C C +GHVA +C K
Sbjct: 121 YSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSK 153
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 47/129 (36%), Positives = 70/129 (54%)
Query: 45 NLCKNCKRPGHFARECP--NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGN 97
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +
Sbjct: 52 DICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 111
Query: 98 CPN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC--TNDKACNNCR 153
C + E C++CG+ GH +DCT C C + GH A +C T++ C C
Sbjct: 112 CDHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINCSKTSEVNCYRCG 163
Query: 154 KTGHLARDC 162
++GHLAR+C
Sbjct: 164 ESGHLAREC 172
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 47 CKNCKRPGHFARECPNV--AICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP--NEG 102
C NC +PGH AR+C + C++CG GHI +CT K C+ C E GH+A NC +E
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETGHVAINCSKTSEV 157
Query: 103 ICHTCGKAGHRARDCT 118
C+ CG++GH AR+CT
Sbjct: 158 NCYRCGESGHLARECT 173
Score = 123 (48.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC--TTKALCWNCREPGHMAGNCPNE 101
C +C GH ++C V C+ CG GH+A C T++ C+ C E GH+A C E
Sbjct: 120 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 175
Score = 106 (42.4 bits), Expect = 0.00028, P = 0.00028
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 168 CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-VCRNCQQLGHMSR 226
C C SGH AR CP +C C + GH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 227 DC-MGPLMVCHNCGGRGHLAYEC 248
DC + C+NCG GH+A +C
Sbjct: 66 DCDLQEDEACYNCGRGGHIAKDC 88
>UNIPROTKB|Q8WW36 [details] [associations]
symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
Length = 166
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 54/141 (38%), Positives = 68/141 (48%)
Query: 50 CKRPGHFARECPNVAICHNCGLPGH-IASECTTKAL---CWNCREPGHMAGNCPNEG-IC 104
C GH+AR CP G GH S+C + L C+ C E G A NC G IC
Sbjct: 9 CGHSGHWARGCPRGGAGGRRG-GGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNIC 67
Query: 105 HTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKA--CNNCRKTGHLARDC 162
+ CG++GH A+DC P + C C + GH A DC K C +C K GH+ +DC
Sbjct: 68 YNCGRSGHIAKDCKDPKRERR--QHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC 125
Query: 163 PNDPICNLCNVSGHVARHCPK 183
C C GHVA +C K
Sbjct: 126 AQVK-CYRCGEIGHVAINCSK 145
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 45 NLCKNCKRPGHFARECPNVAI-----CHNCGLPGHIASECTTKA--LCWNCREPGHMAGN 97
N+C NC R GH A++C + C+ CG GH+A +C + C++C + GH+ +
Sbjct: 65 NICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKD 124
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPGDL 127
C C+ CG+ GH A +C+ PG L
Sbjct: 125 CAQVK-CYRCGEIGHVAINCSKAR--PGQL 151
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 234 (87.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 47/116 (40%), Positives = 58/116 (50%)
Query: 66 CHNCGLPGHIASECTTKAL----CWNCREPGHMAGNC--PN--EGICHTCGKAGHRARDC 117
CHNCG GHI+ EC + C NC + GH A +C P G C CG GH A DC
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 118 TAPPLPPGDLRLCNNCYKQGHFAADCTNDKA-------CNNCRKTGHLARDCPNDP 166
P +P G C NC ++GHFA DC N++ C C + GH +CP P
Sbjct: 632 DQPKVPRGP---CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRP 684
Score = 205 (77.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 42/113 (37%), Positives = 52/113 (46%)
Query: 85 CWNCREPGHMAGNCPNEGI----CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFA 140
C NC E GH++ C + C C + GH A DC P +P G C NC +GHFA
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP---CRNCGIEGHFA 628
Query: 141 ADCTNDKA----CNNCRKTGHLARDCPNDPI-------CNLCNVSGHVARHCP 182
DC K C NC + GH A+DC N+ + C C GH CP
Sbjct: 629 VDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 39/109 (35%), Positives = 51/109 (46%)
Query: 47 CKNCKRPGHFAREC--PNVAI--CHNCGLPGHIASEC----TTKALCWNCREPGHMAGNC 98
C NC GH ++EC P V C NC GH AS+C + C NC GH A +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 99 --PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC 143
P G C CG+ GH A+DC + C C ++GH+ +C
Sbjct: 632 DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 123 (48.4 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 128 RLCNNCYKQGHFAADCTNDKA----CNNCRKTGHLARDC-----PNDPICNLCNVSGHVA 178
R C+NC ++GH + +C K C NC + GH A DC P P C C + GH A
Sbjct: 570 RGCHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFA 628
Query: 179 RHC--PK 183
C PK
Sbjct: 629 VDCDQPK 635
Score = 109 (43.4 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 23/55 (41%), Positives = 27/55 (49%)
Query: 215 CRNCQQLGHMSRDC------MGPLMVCHNCGGRGHLAYECPS------GRFLDRY 257
CRNC Q GH ++DC M P C C GH YECP+ G FL+ Y
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKDLQGNFLESY 695
Score = 35 (17.4 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 92 GHMAGNCPNEGI-CHTCGKAG 111
GH AG N G+ T G G
Sbjct: 278 GHGAGAAENSGLPTETTGFGG 298
>UNIPROTKB|F1NI84 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
Uniprot:F1NI84
Length = 105
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 39/101 (38%), Positives = 56/101 (55%)
Query: 84 LCWNCREPGHMAGNCP-NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAAD 142
+C+ C E GH+A +C E C+ CG+ GH A+DC P + C NC K GH A D
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARD 65
Query: 143 C--TNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHC 181
C +++ C +C + GH+ +DC C C +GHVA +C
Sbjct: 66 CDHADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINC 105
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 43/104 (41%), Positives = 57/104 (54%)
Query: 65 ICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNC--PN---EGICHTCGKAGHRARDCT 118
IC+ CG GH+A +C + C+NC GH+A +C P E C+ CGK GH ARDC
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 67
Query: 119 APPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDC 162
D + C +C + GH DCT K C C +TGH+A +C
Sbjct: 68 H-----ADEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINC 105
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/107 (35%), Positives = 56/107 (52%)
Query: 45 NLCKNCKRPGHFARECP-NVAICHNCGLPGHIASECTT-----KALCWNCREPGHMAGNC 98
++C C GH A++C C+NCG GHIA +C + C+NC +PGH+A +C
Sbjct: 7 DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 66
Query: 99 PN--EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC 143
+ E C++CG+ GH +DCT C C + GH A +C
Sbjct: 67 DHADEQKCYSCGEFGHIQKDCTKVK--------CYRCGETGHVAINC 105
Score = 173 (66.0 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 39/99 (39%), Positives = 52/99 (52%)
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLR--LCNNCYKQGHFAADCTNDK---- 147
M+ + P+ IC+ CG++GH A+DC DL+ C NC + GH A DC K
Sbjct: 1 MSSSLPD--ICYRCGESGHLAKDC--------DLQEDACYNCGRGGHIAKDCKEPKRERE 50
Query: 148 -ACNNCRKTGHLARDCPN--DPICNLCNVSGHVARHCPK 183
C NC K GHLARDC + + C C GH+ + C K
Sbjct: 51 QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK 89
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 43 QSNLCKNCKRPGHFAREC--PN---VAICHNCGLPGHIASEC--TTKALCWNCREPGHMA 95
Q + C NC R GH A++C P C+NCG PGH+A +C + C++C E GH+
Sbjct: 25 QEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 84
Query: 96 GNCPNEGICHTCGKAGHRARDC 117
+C C+ CG+ GH A +C
Sbjct: 85 KDCTKVK-CYRCGETGHVAINC 105
Score = 95 (38.5 bits), Expect = 0.00015, P = 0.00015
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 215 CRNCQQLGHMSRDCMGPL----MVCHNCGGRGHLAYEC 248
C NC + GH+++DC P C+NCG GHLA +C
Sbjct: 29 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 66
Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 214 VCRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYEC 248
+C C + GH+++DC C+NCG GH+A +C
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 42
Score = 39 (18.8 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 213 IVCRNCQQLGHMSRDC 228
+ C C + GH++ +C
Sbjct: 90 VKCYRCGETGHVAINC 105
>DICTYBASE|DDB_G0293328 [details] [associations]
symbol:DDB_G0293328 "Cellular nucleic acid-binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
Length = 131
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 44/126 (34%), Positives = 62/126 (49%)
Query: 77 SECTTKALCWNCREPGHMAGNCPN-----EGICHTCGKAGHRARDCTAPPLPPGDLR--- 128
SE K+ C+ C+E GH++ NCP + C+ C GH +R+C P P + +
Sbjct: 2 SEIKEKS-CYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPI 60
Query: 129 LCNNCYKQGHFAADCTN--DKACNNCRKTGHLARDCPNDPI---------CNLCNVSGHV 177
C C GHFA DC D C NC GH+++DCP+ C CN GH+
Sbjct: 61 KCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHI 120
Query: 178 ARHCPK 183
A+ CP+
Sbjct: 121 AKACPE 126
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 41/133 (30%), Positives = 56/133 (42%)
Query: 47 CKNCKRPGHFARECPNVA-----ICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNE 101
C CK GH +R CP C+ C + GH++ EC +P + P +
Sbjct: 9 CYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNP------QPTFEKKD-PIK 61
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTN--------DKA-CNNC 152
C+ C GH ARDC G C NC GH + DC + D A C C
Sbjct: 62 --CYQCNGFGHFARDCRR-----GRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKC 114
Query: 153 RKTGHLARDCPND 165
+ GH+A+ CP +
Sbjct: 115 NQPGHIAKACPEN 127
Score = 127 (49.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 45 NLCKNC-KRPGHFARECPNVAICHNCGLPGHIASECTTKAL----------CWNCREPGH 93
++ +NC K P E + A C+ C + GH++ EC C+ C GH
Sbjct: 17 HISRNCPKNP-----EAGDRA-CYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGH 70
Query: 94 MAGNCPN--EGICHTCGKAGHRARDCTAPPLP-PG-DLRLCNNCYKQGHFAADCTNDKAC 149
A +C + C+ CG GH ++DC +P G D C C + GH A C +++
Sbjct: 71 FARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKACPENQSE 130
Query: 150 N 150
N
Sbjct: 131 N 131
Score = 110 (43.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 213 IVCRNCQQLGHMSRDCM-GPLMVCHNCGGRGHLAYECPS 250
I C C GH +RDC G C+NCGG GH++ +CPS
Sbjct: 60 IKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPS 98
>FB|FBgn0034802 [details] [associations]
symbol:CG3800 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
Length = 165
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 50/150 (33%), Positives = 67/150 (44%)
Query: 44 SNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGI 103
S C C RPGHFAR+C G PG + + G M N
Sbjct: 4 SATCYKCNRPGHFARDCS----LGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREK--- 56
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT--NDKACNNCRKTGHLARD 161
C+ C + GH AR C P + C C GH + DCT ++ C C KTGH R+
Sbjct: 57 CYKCNQFGHFARAC------PEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRN 110
Query: 162 CP---ND--PI---CNLCNVSGHVARHCPK 183
CP N+ P C CN +GH++++CP+
Sbjct: 111 CPEAVNERGPTNVSCYKCNRTGHISKNCPE 140
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 85 CWNCREPGHMAGNCPNEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC 143
C+ C + GH A CP E C+ C GH ++DCT P C C K GH+ +C
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPT-----CYRCNKTGHWVRNC 111
Query: 144 ---TNDK-----ACNNCRKTGHLARDCPN-DPICNLCNVSGHVARHC 181
N++ +C C +TGH++++CP C C SGH+ R C
Sbjct: 112 PEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 66 CHNCGLPGHIASECTTKA-LCWNCREPGHMAGNCP--NEGICHTCGKAGHRARDCTAPPL 122
C+ C GH A C +A C+ C GH++ +C + C+ C K GH R+C
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVN 116
Query: 123 PPGDLRL-CNNCYKQGHFAADCTN-DKACNNCRKTGHLARDC 162
G + C C + GH + +C K C C K+GHL R+C
Sbjct: 117 ERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 43 QSNLCKNCKRPGHFARECPNV--AICHNCGLPGHIASECT--------TKALCWNCREPG 92
++ C C GH +++C C+ C GH C T C+ C G
Sbjct: 73 EAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTG 132
Query: 93 HMAGNCPNEG-ICHTCGKAGHRARDC 117
H++ NCP C+ CGK+GH R+C
Sbjct: 133 HISKNCPETSKTCYGCGKSGHLRREC 158
Score = 114 (45.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 47 CKNCKRPGHFARECP---------NVAICHNCGLPGHIASECT-TKALCWNCREPGHMAG 96
C C + GH+ R CP NV+ C+ C GHI+ C T C+ C + GH+
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVS-CYKCNRTGHISKNCPETSKTCYGCGKSGHLRR 156
Query: 97 NCPNEG 102
C +G
Sbjct: 157 ECDEKG 162
>WB|WBGene00019537 [details] [associations]
symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
ArrayExpress:Q966I7 Uniprot:Q966I7
Length = 151
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGI--- 103
C C++PGH +R CPN + G G + C+NC+E GH + +CP G
Sbjct: 6 CYKCQQPGHISRNCPNGE--SDGGRRGGGGG-----STCYNCQETGHFSRDCPKGGSGGG 58
Query: 104 ----------CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCR 153
C+ CG GH +RDC + G +G K C NC
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGS----GGYGGRGGEGRSFGGQK-CYNCG 113
Query: 154 KTGHLARDCPN-----DPICNLCNVSGHVARHCP 182
++GH++R+C + C C +GH++R CP
Sbjct: 114 RSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHT 106
C NC+ GHF+R+CP G G C+NC GH + +CP+
Sbjct: 37 CYNCQETGHFSRDCPKG------GSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSAR--SE 88
Query: 107 CGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTN-----DKACNNCRKTGHLARD 161
G G+ R G + C NC + GH + +CT +K C C++TGH++RD
Sbjct: 89 GGSGGYGGRGGEGRSF--GGQK-CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRD 145
Query: 162 CPN 164
CP+
Sbjct: 146 CPS 148
Score = 110 (43.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 215 CRNCQQLGHMSRDCM------------GPLMVCHNCGGRGHLAYECPSGR 252
C NCQ+ GH SRDC G C+NCGGRGH + +CPS R
Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSAR 86
Score = 105 (42.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 66 CHNCGLPGHIASECTTKAL-----CWNCREPGHMAGNCPNE 101
C+NCG GHI+ ECT C+ C+E GH++ +CP++
Sbjct: 109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQ 149
Score = 87 (35.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 128 RLCNNCYKQGHFAADCTNDKA------------CNNCRKTGHLARDCP 163
R C C + GH + +C N ++ C NC++TGH +RDCP
Sbjct: 4 RNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCP 51
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 145 NDKACNNCRKTGHLARDCPNDP------------ICNLCNVSGHVARHCPK 183
+D+ C C++ GH++R+CPN C C +GH +R CPK
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPK 52
Score = 83 (34.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 215 CRNCQQLGHMSRDCM--GPLMV--CHNCGGRGHLAYECPS 250
C NC + GH+SR+C G C+ C GH++ +CPS
Sbjct: 109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPS 148
>TAIR|locus:2827810 [details] [associations]
symbol:CSP3 "cold shock domain protein 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEP;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 eggNOG:COG1278
ProtClustDB:CLSN2685328 GO:GO:0032508 HSSP:O54310 EMBL:AB308041
EMBL:AY035133 EMBL:AY062985 IPI:IPI00519047 PIR:T00837
RefSeq:NP_565427.1 UniGene:At.19464 ProteinModelPortal:Q94C69
SMR:Q94C69 PaxDb:Q94C69 PRIDE:Q94C69 EnsemblPlants:AT2G17870.1
GeneID:816297 KEGG:ath:AT2G17870 TAIR:At2g17870 InParanoid:Q94C69
OMA:MEDQSAA PhylomeDB:Q94C69 Genevestigator:Q94C69 Uniprot:Q94C69
Length = 301
Score = 153 (58.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 45/138 (32%), Positives = 55/138 (39%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC--TAPPLP 123
C++CG GH+A +C + R G +G C+ CG GH ARDC
Sbjct: 163 CYSCGEVGHLAKDC--RGGSGGNRYGGGGGRGSGGDG-CYMCGGVGHFARDCRQNGGGNV 219
Query: 124 PGDLRLCNNCYKQGHFAADCTND---------KACNNCRKTGHLARDCPN---------- 164
G C C GH A CT+ +AC C TGHLARDC
Sbjct: 220 GGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGG 279
Query: 165 -DPICNLCNVSGHVARHC 181
C +C GH AR C
Sbjct: 280 GSNKCFICGKEGHFAREC 297
Score = 145 (56.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/112 (36%), Positives = 51/112 (45%)
Query: 47 CKNCKRPGHFARECP-----NV----AICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
C C GHFAR+C NV + C+ CG GHIA CT+K P +G
Sbjct: 198 CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKI-------P---SGG 247
Query: 98 CPNEGICHTCGKAGHRARDC----TAPPLPPGDLRLCNNCYKQGHFAADCTN 145
C+ CG GH ARDC + G C C K+GHFA +CT+
Sbjct: 248 GGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
Score = 142 (55.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 42/122 (34%), Positives = 50/122 (40%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGN-CPNEGICHTCGKAGHRARDCTAPPLPP 124
C NCG GH+A +C + + G G EG C+ CG GH ARDC
Sbjct: 96 CFNCGEVGHMAKDCDGGS---GGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGN 152
Query: 125 -----GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVAR 179
G R C +C + GH A DC N R G R D C +C GH AR
Sbjct: 153 SGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN--RYGGGGGRGSGGDG-CYMCGGVGHFAR 209
Query: 180 HC 181
C
Sbjct: 210 DC 211
Score = 122 (48.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 44/151 (29%), Positives = 56/151 (37%)
Query: 47 CKNCKRPGHFARECPNVA------------ICHNCGLPGHIASECTTKALCWNCREPGHM 94
C C GHFAR+C C++CG GH+A +C + R G
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC--RGGSGGNRYGGGG 189
Query: 95 AGNCPNEGICHTCGKAGHRARDC--TAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNC 152
+G C+ CG GH ARDC G C C GH A CT+
Sbjct: 190 GRGSGGDG-CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGG- 247
Query: 153 RKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G R C C +GH+AR C +
Sbjct: 248 ---GGGGRACYE------CGGTGHLARDCDR 269
Score = 83 (34.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 28/90 (31%), Positives = 34/90 (37%)
Query: 102 GICHTCGKAGHRARDCTA----PPLPPGDLRL------CNNCYKQGHFAADCTNDKACNN 151
G C CG+ GH A+DC G R C C GHFA DC N+
Sbjct: 94 GNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNS 153
Query: 152 CRKTGHLARDCPNDPICNLCNVSGHVARHC 181
G R C + C GH+A+ C
Sbjct: 154 GGGGGG-GRPCYS------CGEVGHLAKDC 176
Score = 78 (32.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 215 CRNCQQLGHMSRDCM--------GPLMVCHNCGGRGHLAYECPS 250
C C +GH +RDC G C+ CGG GH+A C S
Sbjct: 198 CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTS 241
Score = 75 (31.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 215 CRNCQQLGHMSRDCMGPL--------MVCHNCGGRGHLAYEC 248
C C +GH+++ C + C+ CGG GHLA +C
Sbjct: 226 CYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDC 267
Score = 67 (28.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 215 CRNCQQLGHMSRDCM----------GPLMVCHNCGGRGHLAYECPS 250
C C GH++RDC G C CG GH A EC S
Sbjct: 254 CYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
>ZFIN|ZDB-GENE-030102-2 [details] [associations]
symbol:zcchc7 "zinc finger, CCHC domain containing 7"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 ZFIN:ZDB-GENE-030102-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000048226 EMBL:BX511134
EMBL:BX284619 EMBL:CR786570 IPI:IPI00996291
Ensembl:ENSDART00000129066 ArrayExpress:F1QLY2 Bgee:F1QLY2
Uniprot:F1QLY2
Length = 627
Score = 180 (68.4 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/142 (28%), Positives = 54/142 (38%)
Query: 29 RDAPXXXXXXXXXXQSNLCKNCKRPGHFARECPN---VAICHNCGLPGHIASECTTKALC 85
R P +S C+NC + GH ++ CP V C CGL GH+ C + C
Sbjct: 258 RHVPNRSTYRYYTEKSITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCPNRH-C 316
Query: 86 WNCREPGHMAGNCPNEGI----CHTCGKAGHRARDCTAPPL-PPGDLRLCNNCYKQGHFA 140
NC PGH + +C CH CG GH C P + L ++
Sbjct: 317 SNCSLPGHTSDDCLERAFWYKRCHRCGMTGHFIDAC--PQIWRQYHLTTTAGPIRKSADP 374
Query: 141 ADCTNDKACNNCRKTGHLARDC 162
C C NC + GH C
Sbjct: 375 KACQKRAYCYNCSRKGHFGHQC 396
Score = 151 (58.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/109 (33%), Positives = 45/109 (41%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH R CPN C NC LPGH + +C +A C C GH CP
Sbjct: 298 CSLCGLRGHLLRTCPN-RHCSNCSLPGHTSDDCLERAFWYKRCHRCGMTGHFIDACPQIW 356
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACN 150
H AG + +A P C NC ++GHF C+ + N
Sbjct: 357 RQYHLTTTAGPIRK--SADPKACQKRAYCYNCSRKGHFGHQCSQRRMYN 403
Score = 143 (55.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 34/92 (36%), Positives = 44/92 (47%)
Query: 80 TTKAL-CWNCREPGHMAGNCPN-EGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
T K++ C NC + GH++ NCP + + C CG GH R C P R C+NC
Sbjct: 270 TEKSITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTC------PN--RHCSNCSL 321
Query: 136 QGHFAADCTND----KACNNCRKTGHLARDCP 163
GH + DC K C+ C TGH CP
Sbjct: 322 PGHTSDDCLERAFWYKRCHRCGMTGHFIDACP 353
Score = 138 (53.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 33/129 (25%), Positives = 47/129 (36%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP 163
C C K GH +++C P L + C+ C +GH C N + C+NC GH + DC
Sbjct: 276 CRNCNKTGHLSKNC--PTLKK--VPCCSLCGLRGHLLRTCPN-RHCSNCSLPGHTSDDCL 330
Query: 164 NDPI----CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNCQ 219
C+ C ++GH CP+ C NC
Sbjct: 331 ERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKACQKRAY---CYNCS 387
Query: 220 QLGHMSRDC 228
+ GH C
Sbjct: 388 RKGHFGHQC 396
Score = 55 (24.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 235 CHNCGGRGHLAYECPSGR 252
C+NC +GH ++C R
Sbjct: 383 CYNCSRKGHFGHQCSQRR 400
>TAIR|locus:2078526 [details] [associations]
symbol:AT3G42860 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010212 "response to ionizing radiation"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001878
InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL138654 EMBL:AY065276 EMBL:AY133785
IPI:IPI00532574 PIR:T47344 RefSeq:NP_189872.1 UniGene:At.28534
ProteinModelPortal:Q9M1L9 SMR:Q9M1L9 EnsemblPlants:AT3G42860.1
GeneID:823332 KEGG:ath:AT3G42860 TAIR:At3g42860
HOGENOM:HOG000006218 InParanoid:Q9M1L9 OMA:CGFFKWC PhylomeDB:Q9M1L9
ProtClustDB:CLSN2684249 ArrayExpress:Q9M1L9 Genevestigator:Q9M1L9
Uniprot:Q9M1L9
Length = 372
Score = 170 (64.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/126 (33%), Positives = 60/126 (47%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTA----PP 121
C+ CG GH A +CT ++ + G + G C CGK GH +RDCTA P
Sbjct: 239 CYKCGKEGHWARDCTVQS------DTGPVKSTSA-AGDCFKCGKPGHWSRDCTAQSGNPK 291
Query: 122 LPPGDLRL------CNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSG 175
PG ++ C C KQGH++ DCT + N ++G A+ + C C +G
Sbjct: 292 YEPGQMKSSSSSGECYKCGKQGHWSRDCTGQSS-NQQFQSGQ-AKSTSSTGDCYKCGKAG 349
Query: 176 HVARHC 181
H +R C
Sbjct: 350 HWSRDC 355
Score = 167 (63.8 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 47 CKNCKRPGHFAREC-------PNVAI-----CHNCGLPGHIASECTTKALCWNCR-EPGH 93
C C + GH+AR+C P + C CG PGH + +CT ++ N + EPG
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQS--GNPKYEPGQ 296
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCR 153
M + + G C+ CGK GH +RDCT + N ++ G A ++ C C
Sbjct: 297 MKSSS-SSGECYKCGKQGHWSRDCTG--------QSSNQQFQSGQ-AKSTSSTGDCYKCG 346
Query: 154 KTGHLARDC 162
K GH +RDC
Sbjct: 347 KAGHWSRDC 355
Score = 134 (52.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 39/143 (27%), Positives = 49/143 (34%)
Query: 104 CHTCGKAGHRARDCTA-----PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
C+ CGK GH ARDCT P C C K GH++ DCT N + G +
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSG-NPKYEPGQM 297
Query: 159 ARDCPNDPICNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNC 218
+ + C C GH +R C C C
Sbjct: 298 -KSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGD-----------CYKC 345
Query: 219 QQLGHMSRDCMGPLMVCHNCGGR 241
+ GH SRDC P + G R
Sbjct: 346 GKAGHWSRDCTSPAQTTNTPGKR 368
Score = 127 (49.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 47 CKNCKRPGHFAREC------PNV-----------AICHNCGLPGHIASECTTKALCWNCR 89
C C +PGH++R+C P C+ CG GH + +CT ++ N +
Sbjct: 270 CFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTGQSS--NQQ 327
Query: 90 EPGHMAGNCPNEGICHTCGKAGHRARDCTAP 120
A + + G C+ CGKAGH +RDCT+P
Sbjct: 328 FQSGQAKSTSSTGDCYKCGKAGHWSRDCTSP 358
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 175 (66.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASECTTKALCWNCREPGHMAG 96
++N C NC++PGH + +CP +C+NC PGH + ECT + RE G G
Sbjct: 156 RNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER---KPRE-GRTGG 211
Query: 97 NCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND-KACNNCRKT 155
G + G G G ++ C NC +GH +A+C + C NC +
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 270
Query: 156 GHLARDCPN 164
GH + +CPN
Sbjct: 271 GHRSNECPN 279
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/137 (28%), Positives = 54/137 (39%)
Query: 54 GHFARECPNVAICHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNEGICHTC 107
GH E N C NC PGH +S+C +C+NC++PGH + C E
Sbjct: 150 GHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPRE- 206
Query: 108 GKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAA-DCTNDKACNNCRKTGHLARDCPNDP 166
G+ G G+ + G F + C NC+ GH + +CP P
Sbjct: 207 GRTGGFGGGAGF-----GNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPP 261
Query: 167 I-CNLCNVSGHVARHCP 182
C C GH + CP
Sbjct: 262 RGCFNCGEQGHRSNECP 278
Score = 103 (41.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 70 GLPGHIASECTTKALCWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDCTAPPLP 123
G GH E C+NC++PGH + +CP +C+ C + GH +R+CT P
Sbjct: 147 GEGGHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Score = 101 (40.6 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C NC+ GH S +C P C NCG +GH + ECP+
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279
Score = 66 (28.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 230 GPLMVCHNCGGRGHLAYECP 249
GP M C NC G GH + ECP
Sbjct: 240 GP-MKCFNCKGEGHRSAECP 258
Score = 56 (24.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECP 249
C NC + GH S +C P G G A P
Sbjct: 264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 175 (66.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASECTTKALCWNCREPGHMAG 96
++N C NC++PGH + +CP +C+NC PGH + ECT + RE G G
Sbjct: 156 RNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER---KPRE-GRTGG 211
Query: 97 NCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND-KACNNCRKT 155
G + G G G ++ C NC +GH +A+C + C NC +
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 270
Query: 156 GHLARDCPN 164
GH + +CPN
Sbjct: 271 GHRSNECPN 279
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/137 (28%), Positives = 54/137 (39%)
Query: 54 GHFARECPNVAICHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNEGICHTC 107
GH E N C NC PGH +S+C +C+NC++PGH + C E
Sbjct: 150 GHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPRE- 206
Query: 108 GKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAA-DCTNDKACNNCRKTGHLARDCPNDP 166
G+ G G+ + G F + C NC+ GH + +CP P
Sbjct: 207 GRTGGFGGGAGF-----GNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPP 261
Query: 167 I-CNLCNVSGHVARHCP 182
C C GH + CP
Sbjct: 262 RGCFNCGEQGHRSNECP 278
Score = 103 (41.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 70 GLPGHIASECTTKALCWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDCTAPPLP 123
G GH E C+NC++PGH + +CP +C+ C + GH +R+CT P
Sbjct: 147 GEGGHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Score = 101 (40.6 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C NC+ GH S +C P C NCG +GH + ECP+
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279
Score = 66 (28.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 230 GPLMVCHNCGGRGHLAYECP 249
GP M C NC G GH + ECP
Sbjct: 240 GP-MKCFNCKGEGHRSAECP 258
Score = 56 (24.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECP 249
C NC + GH S +C P G G A P
Sbjct: 264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298
>SGD|S000001341 [details] [associations]
symbol:AIR1 "Zinc knuckle protein" species:4932
"Saccharomyces cerevisiae" [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
processing" evidence=IGI] [GO:0043629 "ncRNA polyadenylation"
evidence=IDA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071037 "nuclear polyadenylation-dependent snRNA
catabolic process" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 SGD:S000001341 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 EMBL:BK006942 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 OrthoDB:EOG4F21BK GO:GO:0031499 Gene3D:4.10.60.10
InterPro:IPR016713 PIRSF:PIRSF018162 SUPFAM:SSF57756 EMBL:Z37997
PIR:S48365 RefSeq:NP_012186.1 ProteinModelPortal:P40507 SMR:P40507
DIP:DIP-2700N IntAct:P40507 MINT:MINT-518330 STRING:P40507
PaxDb:P40507 PeptideAtlas:P40507 EnsemblFungi:YIL079C GeneID:854731
KEGG:sce:YIL079C CYGD:YIL079c GeneTree:ENSGT00510000048226
HOGENOM:HOG000000966 KO:K12597 OMA:HISADCK NextBio:977425
Genevestigator:P40507 GermOnline:YIL079C GO:GO:0043629
GO:GO:0071031 GO:GO:0071039 GO:GO:0071035 GO:GO:0071036
GO:GO:0071037 GO:GO:0071038 Uniprot:P40507
Length = 360
Score = 166 (63.5 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 40/133 (30%), Positives = 50/133 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCG-LPGHIASECTTKALCWNCREPGHMAGNCPNEG--- 102
C NC + GH R CP+V IC CG + H + C +C NC GH CP++
Sbjct: 76 CNNCSQRGHLKRNCPHV-ICTYCGFMDDHYSQHCPKAIICTNCNANGHYKSQCPHKWKKV 134
Query: 103 ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDC 162
C C H C P + L + QG F C NC GH DC
Sbjct: 135 FCTLCNSKRHSRERC--PSIWRSYLLKTKDA-NQGDFDFQTV---FCYNCGNAGHFGDDC 188
Query: 163 PNDPICNLCNVSG 175
+ N G
Sbjct: 189 AERRSSRVPNTDG 201
Score = 130 (50.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/129 (24%), Positives = 42/129 (32%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNC-YKQGHFAADCTNDKACNNCRKTGHLARDC 162
C+ C + GH R+C P + +C C + H++ C C NC GH C
Sbjct: 76 CNNCSQRGHLKRNC--PHV------ICTYCGFMDDHYSQHCPKAIICTNCNANGHYKSQC 127
Query: 163 PND---PICNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVCRNCQ 219
P+ C LCN H CP + C NC
Sbjct: 128 PHKWKKVFCTLCNSKRHSRERCPSIWRSYLLKTKDANQGDFDFQT--------VFCYNCG 179
Query: 220 QLGHMSRDC 228
GH DC
Sbjct: 180 NAGHFGDDC 188
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 156 (60.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASECTTKALCWNCREPGHMAG 96
++N C NC++PGH + +CP +C+NC PGH + +C + R G +G
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRN-GFTSG 427
Query: 97 -NCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND-KACNNCRK 154
N+G G G A G ++ C NC +GH +A+C + C NC +
Sbjct: 428 FGGGNDG-----GFGGGNAEGFGNNE-ERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGE 480
Query: 155 TGHLARDCPN 164
GH + +CPN
Sbjct: 481 QGHRSNECPN 490
Score = 134 (52.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 33/124 (26%), Positives = 51/124 (41%)
Query: 66 CHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTA 119
C NC PGH +++C +C+NC++PGH + +CP E + R+
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE-------RKPREGRNGFT 425
Query: 120 PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPI-CNLCNVSGHVA 178
G+ +G + C NC+ GH + +CP P C C GH +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRS 485
Query: 179 RHCP 182
CP
Sbjct: 486 NECP 489
Score = 111 (44.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 30/106 (28%), Positives = 44/106 (41%)
Query: 85 CWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGH 138
C+NC++PGH + +CP +C+ C + GH +RDC P R N + G
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP----REGRNGFTSG- 427
Query: 139 FAADCTNDKACNNCRKTGHLARDCPNDPI-CNLCNVSGHVARHCPK 183
F ND G + P+ C C GH + CP+
Sbjct: 428 FGGG--NDGGFGGGNAEG-FGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 102 (41.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 85 CWNCREPGHMAGNCPN--EGICHTCGKAGHRARDCTAPPLP 123
C+NC+ GH + CP G C CG+ GHR+ +C P P
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-CFNCGEQGHRSNECPNPAKP 494
Score = 101 (40.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C NC+ GH S +C P C NCG +GH + ECP+
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490
Score = 100 (40.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 85 CWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDC 117
C+NC++PGH + +CP +C+ C + GH +RDC
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDC 297
Score = 98 (39.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 215 CRNCQQLGHMSRDCMGPLM-----VCHNCGGRGHLAYECPSGR 252
C NCQQ GH S DC P VC+NC GH + +CP R
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 97 (39.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASEC 79
++N C NC++PGH + +CP +C+NC PGH + +C
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDC 297
Score = 97 (39.2 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 66 CHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNE 101
C NC PGH +++C +C+NC++PGH + +CP E
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDK 147
C C + GHR+ DC P + R+C NC + GH + DC ++
Sbjct: 259 CFNCQQPGHRSNDCPEPK-KEREPRVCYNCQQPGHNSRDCPEER 301
Score = 93 (37.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 130 CNNCYKQGHFAADCTNDK------ACNNCRKTGHLARDCPND 165
C NC + GH + DC K C NC++ GH +RDCP +
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 86 (35.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 149 CNNCRKTGHLARDCPN-----DP-ICNLCNVSGHVARHCPK 183
C NC++ GH + DCP +P +C C GH +R CP+
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 69 (29.3 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 214 VCRNCQQLGHMSRDC 228
VC NCQQ GH SRDC
Sbjct: 397 VCYNCQQPGHNSRDC 411
Score = 68 (29.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 43 QSNLCKNCKRPGHFARECP 61
+ +C NC++PGH +R+CP
Sbjct: 280 EPRVCYNCQQPGHNSRDCP 298
Score = 66 (28.3 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 230 GPLMVCHNCGGRGHLAYECP 249
GP M C NC G GH + ECP
Sbjct: 451 GP-MKCFNCKGEGHRSAECP 469
Score = 57 (25.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECP 249
C NC + GH S +C P G G A P
Sbjct: 475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 156 (60.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASECTTKALCWNCREPGHMAG 96
++N C NC++PGH + +CP +C+NC PGH + +C + R G +G
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRN-GFTSG 427
Query: 97 -NCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTND-KACNNCRK 154
N+G G G A G ++ C NC +GH +A+C + C NC +
Sbjct: 428 FGGGNDG-----GFGGGNAEGFGNNE-ERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGE 480
Query: 155 TGHLARDCPN 164
GH + +CPN
Sbjct: 481 QGHRSNECPN 490
Score = 134 (52.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 33/124 (26%), Positives = 51/124 (41%)
Query: 66 CHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTA 119
C NC PGH +++C +C+NC++PGH + +CP E + R+
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE-------RKPREGRNGFT 425
Query: 120 PPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPI-CNLCNVSGHVA 178
G+ +G + C NC+ GH + +CP P C C GH +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRS 485
Query: 179 RHCP 182
CP
Sbjct: 486 NECP 489
Score = 111 (44.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 30/106 (28%), Positives = 44/106 (41%)
Query: 85 CWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGH 138
C+NC++PGH + +CP +C+ C + GH +RDC P R N + G
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP----REGRNGFTSG- 427
Query: 139 FAADCTNDKACNNCRKTGHLARDCPNDPI-CNLCNVSGHVARHCPK 183
F ND G + P+ C C GH + CP+
Sbjct: 428 FGGG--NDGGFGGGNAEG-FGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 102 (41.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 85 CWNCREPGHMAGNCPN--EGICHTCGKAGHRARDCTAPPLP 123
C+NC+ GH + CP G C CG+ GHR+ +C P P
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-CFNCGEQGHRSNECPNPAKP 494
Score = 101 (40.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPS 250
C NC+ GH S +C P C NCG +GH + ECP+
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490
Score = 100 (40.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 85 CWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDC 117
C+NC++PGH + +CP +C+ C + GH +RDC
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDC 297
Score = 98 (39.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 215 CRNCQQLGHMSRDCMGPLM-----VCHNCGGRGHLAYECPSGR 252
C NCQQ GH S DC P VC+NC GH + +CP R
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 97 (39.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 43 QSNLCKNCKRPGHFARECPNVA------ICHNCGLPGHIASEC 79
++N C NC++PGH + +CP +C+NC PGH + +C
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDC 297
Score = 97 (39.2 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 66 CHNCGLPGHIASECTTKA------LCWNCREPGHMAGNCPNE 101
C NC PGH +++C +C+NC++PGH + +CP E
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDK 147
C C + GHR+ DC P + R+C NC + GH + DC ++
Sbjct: 259 CFNCQQPGHRSNDCPEPK-KEREPRVCYNCQQPGHNSRDCPEER 301
Score = 93 (37.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 130 CNNCYKQGHFAADCTNDK------ACNNCRKTGHLARDCPND 165
C NC + GH + DC K C NC++ GH +RDCP +
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 86 (35.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 149 CNNCRKTGHLARDCPN-----DP-ICNLCNVSGHVARHCPK 183
C NC++ GH + DCP +P +C C GH +R CP+
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 69 (29.3 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 214 VCRNCQQLGHMSRDC 228
VC NCQQ GH SRDC
Sbjct: 397 VCYNCQQPGHNSRDC 411
Score = 68 (29.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 43 QSNLCKNCKRPGHFARECP 61
+ +C NC++PGH +R+CP
Sbjct: 280 EPRVCYNCQQPGHNSRDCP 298
Score = 66 (28.3 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 230 GPLMVCHNCGGRGHLAYECP 249
GP M C NC G GH + ECP
Sbjct: 451 GP-MKCFNCKGEGHRSAECP 469
Score = 57 (25.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECP 249
C NC + GH S +C P G G A P
Sbjct: 475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509
>POMBASE|SPBP35G2.08c [details] [associations]
symbol:air1 "zinc knuckle TRAMP complex subunit Air1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016075 "rRNA catabolic
process" evidence=ISO] [GO:0016076 "snRNA catabolic process"
evidence=ISO] [GO:0016077 "snoRNA catabolic process" evidence=ISO]
[GO:0016078 "tRNA catabolic process" evidence=ISO] [GO:0031499
"TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA polyadenylation
involved in polyadenylation-dependent ncRNA catabolic process"
evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPBP35G2.08c GO:GO:0005730 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0003676
RefSeq:NP_595383.2 HSSP:Q9H9Z2 STRING:Q9P795
EnsemblFungi:SPBP35G2.08c.1 GeneID:2541349 eggNOG:COG5082
OrthoDB:EOG4F21BK NextBio:20802458 GO:GO:0031499 GO:GO:0043630
GO:GO:0016075 GO:GO:0016077 GO:GO:0016076 GO:GO:0016078
Gene3D:4.10.60.10 InterPro:IPR016713 PIRSF:PIRSF018162
SUPFAM:SSF57756 Uniprot:Q9P795
Length = 315
Score = 158 (60.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 44/148 (29%), Positives = 63/148 (42%)
Query: 43 QSNLCKNCKRPGHFARECPNVAICHNCG-LPGHIASECTTKALCWNCREPGHMAGNC--P 99
+S +C NCK GH +++CP+V +C CG + HI+ C C NC GH+A C P
Sbjct: 87 ESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSEP 145
Query: 100 NE-G--ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGH-FAADCTN-DKACNNCRK 154
+ G +C TC H + C PL + ++ H D + K C NC
Sbjct: 146 RKRGPRVCRTCHTDTHTSSTC---PL------IWRYYVEKEHPVRIDVSEVRKFCYNCAS 196
Query: 155 TGHLARDCPNDPICNLCNVSGHVARHCP 182
H DC N + +CP
Sbjct: 197 DEHFGDDCTLPSRSNYPESTAFCEANCP 224
Score = 136 (52.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 30/93 (32%), Positives = 42/93 (45%)
Query: 52 RPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCRE-PGHMAGNCPNEGICHTCGKA 110
R +F + +CHNC GHI+ +C LC C H++ CP C CG
Sbjct: 77 RGRYFGSDPSESIVCHNCKGNGHISKDCP-HVLCTTCGAIDDHISVRCPWTKKCMNCGLL 135
Query: 111 GHRARDCTAPPLPPGDLRLCNNCYKQGHFAADC 143
GH A C+ P G R+C C+ H ++ C
Sbjct: 136 GHIAARCSEPR-KRGP-RVCRTCHTDTHTSSTC 166
Score = 132 (51.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 37/126 (29%), Positives = 48/126 (38%)
Query: 46 LCKNCKR-PGHFARECPNVAICHNCGLPGHIASECTTKA-----LCWNCREPGHMAGNCP 99
LC C H + CP C NCGL GHIA+ C+ +C C H + CP
Sbjct: 108 LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCP 167
Query: 100 NEGICHTCGKAGHRARDCTAPPLPPGDLR-LCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
I + H R + ++R C NC HF DCT N T
Sbjct: 168 L--IWRYYVEKEHPVR------IDVSEVRKFCYNCASDEHFGDDCTLPSRSNYPESTAFC 219
Query: 159 ARDCPN 164
+CP+
Sbjct: 220 EANCPS 225
Score = 103 (41.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 138 HFAADCTNDKACNNCRKTGHLARDCPNDPICNLCN-VSGHVARHCP 182
+F +D + C+NC+ GH+++DCP+ +C C + H++ CP
Sbjct: 80 YFGSDPSESIVCHNCKGNGHISKDCPH-VLCTTCGAIDDHISVRCP 124
Score = 66 (28.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 215 CRNCQQLGHMSRDCMGPLM----VCHNCGGRGHLAYECP 249
C NC LGH++ C P VC C H + CP
Sbjct: 129 CMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCP 167
Score = 39 (18.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 11/37 (29%), Positives = 12/37 (32%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRGHLAYECPSG 251
C NC H DC P + CPSG
Sbjct: 191 CYNCASDEHFGDDCTLPSRSNYP-ESTAFCEANCPSG 226
Score = 39 (18.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 214 VCRNCQQLGHMSRDCMGPLM 233
VCR C H S C PL+
Sbjct: 152 VCRTCHTDTHTSSTC--PLI 169
>TAIR|locus:2079859 [details] [associations]
symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
Genevestigator:Q9FYD1 Uniprot:Q9FYD1
Length = 551
Score = 161 (61.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 56/240 (23%), Positives = 84/240 (35%)
Query: 47 CKNCKRPGHFARECPNVAI----CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNE- 101
C +C GH + CP C CG H A +C+ C+ C++ GH A +CP++
Sbjct: 168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKY 227
Query: 102 ------GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKT 155
+C CG GH D+ LC Y+ ++ + D C C+
Sbjct: 228 KNGSKGAVCLRCGDFGH-------------DMILCK--YE---YSKEDLKDVQCYICKSF 269
Query: 156 GHLARDCPNDPI-----CNLCNVSGHVARHCPKXXXXXXXXXXXXXXXXXXXXXXXXXXX 210
GHL P + + C C GH C +
Sbjct: 270 GHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSREASE--- 326
Query: 211 XXIVCRNCQQLGHMSRDCMGPLMV-----------CHNCGGRGHLAYECPSGRFLDRYSR 259
C C + GH +R+C + C+ C G GH A ECP+ + + R
Sbjct: 327 ----CYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQVSKRDR 382
>UNIPROTKB|Q65XV7 [details] [associations]
symbol:P0016H04.11 "Os05g0111000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001878 InterPro:IPR004365
InterPro:IPR004591 InterPro:IPR007199 Pfam:PF00098 Pfam:PF01336
Pfam:PF04057 PROSITE:PS50158 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
EMBL:AP008211 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:CM000142 InterPro:IPR013955
Pfam:PF08646 eggNOG:COG1599 KO:K07466 TIGRFAMs:TIGR00617
HOGENOM:HOG000162322 EMBL:AC079356 RefSeq:NP_001054445.1
UniGene:Os.53618 IntAct:Q65XV7 EnsemblPlants:LOC_Os05g02040.1
GeneID:4337594 KEGG:osa:4337594 OMA:RWTIKVR ProtClustDB:CLSN2695308
Uniprot:Q65XV7
Length = 951
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/115 (36%), Positives = 52/115 (45%)
Query: 62 NVAICHNCGLPGHIASEC---------TTKALCWNCREPGHMAGNCPNEGICHTCGKAGH 112
N+ C CG GH A C T A + +AGN +E C+ C + GH
Sbjct: 812 NLQTCSICGANGHSAQICHVGADMDMQETSAGGSSMGNYNSIAGNGSSE--CYKCKQPGH 869
Query: 113 RARDCTAPPLPPGDLRLCNNCYKQGHFAADC----TNDKACNNCRKTGHLARDCP 163
ARDC P G L C C + GHF+ DC T C C++ GH ARDCP
Sbjct: 870 YARDC--PGQSTGGLE-CFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDCP 921
Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIASECTTKAL----CWNCREPGHMA 95
S+ C CK+PGH+AR+CP + C C PGH + +C ++ C+ C++PGH A
Sbjct: 858 SSECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFA 917
Query: 96 GNCPNE 101
+CP +
Sbjct: 918 RDCPGQ 923
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 24/61 (39%), Positives = 29/61 (47%)
Query: 130 CNNCYKQGHFAADC----TNDKACNNCRKTGHLARDCPNDPI----CNLCNVSGHVARHC 181
C C + GH+A DC T C C++ GH +RDCP C C GH AR C
Sbjct: 861 CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDC 920
Query: 182 P 182
P
Sbjct: 921 P 921
>POMBASE|SPAC683.02c [details] [associations]
symbol:SPAC683.02c "zf-CCHC type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 PomBase:SPAC683.02c
EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
PIR:T50246 RefSeq:NP_594481.1 EnsemblFungi:SPAC683.02c.1
GeneID:2543491 KEGG:spo:SPAC683.02c HOGENOM:HOG000059608
OMA:FICHENG OrthoDB:EOG4P8JTN NextBio:20804503 Uniprot:Q9HFF2
Length = 218
Score = 149 (57.5 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 43 QSNLCKNCKRPGHFARECP----NVAICHNCGLPGHIASECTTK-----ALCWNCREPGH 93
+ C C++ GH ++CP NV+IC CG H + C+ K A C+ C E GH
Sbjct: 75 RDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHENGH 134
Query: 94 MAGNC--------PNEGICHTCGKAGHRARDC 117
++G C P G C C H A+DC
Sbjct: 135 LSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166
Score = 133 (51.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 36/106 (33%), Positives = 47/106 (44%)
Query: 85 CWNCREPGHMAGNCP----NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFA 140
C+ CR+ GH+ +CP N IC CG H C+ P C C++ GH +
Sbjct: 79 CFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKG--PLKFAKCFICHENGHLS 136
Query: 141 ADCT-NDKA-------CNNCRKTGHLARDCPNDPICNLCNVS-GHV 177
C N K C C HLA+DC D + N +VS GHV
Sbjct: 137 GQCEQNPKGLYPKGGCCKFCSSVHHLAKDC--DQV-NKDDVSFGHV 179
>CGD|CAL0005378 [details] [associations]
symbol:orf19.4844 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IEA]
[GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
process" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 CGD:CAL0005378 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000001 EMBL:AACQ01000002
eggNOG:COG5082 Gene3D:4.10.60.10 InterPro:IPR016713
PIRSF:PIRSF018162 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_723340.1
RefSeq:XP_723530.1 STRING:Q5APC1 GeneID:3634843 GeneID:3634974
KEGG:cal:CaO19.12307 KEGG:cal:CaO19.4844 Uniprot:Q5APC1
Length = 381
Score = 151 (58.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/146 (28%), Positives = 54/146 (36%)
Query: 46 LCKNCKRPGHFARECPNVAICHNCG-LPGHIASECTTKALCWNCREPGHMAGNCPNE--- 101
LC NC + GH +C V ICH CG + H S+C T +C C E GH+ C ++
Sbjct: 87 LCANCYKRGHTRAKC-TVVICHKCGAIDDHYESQCPTTIICSRCGEKGHIVSQCKSKIRK 145
Query: 102 -GICHTCGKAGHRARDCTAPPLPPGDLR-LCNNCYKQGHFAADCTNDKA-CNNCRKTGHL 158
C TC H +C P R QG + C NC H
Sbjct: 146 RQYCRTCDSFKHGDENC------PSIWRSYITKSPSQGENEESSVLPRIYCYNCASNEHF 199
Query: 159 ARDCPNDPICNLCNV-SGHVARHCPK 183
+C + N S + PK
Sbjct: 200 GDECDKPRSSRIPNFGSAFSGNNLPK 225
>WB|WBGene00017210 [details] [associations]
symbol:F07E5.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0006898
GO:GO:0040010 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:FO080110 PIR:T34410 RefSeq:NP_494168.1
ProteinModelPortal:P91223 SMR:P91223 STRING:P91223 PaxDb:P91223
EnsemblMetazoa:F07E5.5 GeneID:173564 KEGG:cel:CELE_F07E5.5
UCSC:F07E5.5 CTD:173564 WormBase:F07E5.5
GeneTree:ENSGT00510000047308 HOGENOM:HOG000021839 InParanoid:P91223
OMA:INDWRAA NextBio:880195 Uniprot:P91223
Length = 384
Score = 150 (57.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 31/97 (31%), Positives = 43/97 (44%)
Query: 81 TKALCWNCREPGHMAGNCP------NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCY 134
T + C++CREPGH +CP ++G+C CG H +C + C C
Sbjct: 227 TGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCK 286
Query: 135 KQGHFAADCTNDK--------ACNNCRKTGHLARDCP 163
+ GH + DC + CN C HL RDCP
Sbjct: 287 QVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCP 323
>TAIR|locus:2156647 [details] [associations]
symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
Uniprot:Q9FHC2
Length = 268
Score = 139 (54.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 85 CWNCREPGHMAGNCPNEG------ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGH 138
C+ C H+A CP + IC C + GH ++C + +LC NC GH
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGH 135
Query: 139 FAADC--------TNDKACNNCRKTGHLARDCPND-----PI---CNLCNVSGHVARHCP 182
+ C T +C C+ GH++++CP + P+ C +C H+ + CP
Sbjct: 136 SLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCP 195
Score = 123 (48.4 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 34/111 (30%), Positives = 49/111 (44%)
Query: 89 REPGHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDL-RLCNNCYKQGHFAADC---T 144
R P + G P EG C C H A+ C P + ++C C ++GH +C
Sbjct: 62 RHPLRVPGMKPGEG-CFICHSKTHIAKLC--PEKSEWERNKICLQCRRRGHSLKNCPEKN 118
Query: 145 ND----KACNNCRKTGHLARDCP---ND-----PICNLCNVSGHVARHCPK 183
N+ K C NC TGH CP D C +C GH++++CP+
Sbjct: 119 NESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPE 169
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 43 QSNLCKNCKRPGHFARECP---NVA----ICHNCGLPGHIASECT-------TK-ALCWN 87
++ +C C+R GH + CP N + +C+NCG GH S C TK A C+
Sbjct: 97 RNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFI 156
Query: 88 CREPGHMAGNCP 99
C+ GH++ NCP
Sbjct: 157 CKGQGHISKNCP 168
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 34/131 (25%), Positives = 47/131 (35%)
Query: 47 CKNCKRPGHFARECPNVA------ICHNCGLPGHIASEC-------TTKALCWNCREPGH 93
C C H A+ CP + IC C GH C + K LC+NC + GH
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGH 135
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCR 153
+CP + G + C + G + NC + H C C
Sbjct: 136 SLSHCP-----YPMEDGGTKFASCF---ICKGQGHISKNCPENKHGIYPMGG--CCKVCG 185
Query: 154 KTGHLARDCPN 164
HL +DCP+
Sbjct: 186 SVAHLVKDCPD 196
>SGD|S000002334 [details] [associations]
symbol:AIR2 "RNA-binding subunit of the TRAMP nuclear RNA
surveillance complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030674 "protein binding, bridging" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;IDA] [GO:0043629 "ncRNA
polyadenylation" evidence=IDA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IGI]
[GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
process" evidence=IGI] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IGI]
[GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end processing"
evidence=IGI] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IDA] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IGI]
[GO:0006400 "tRNA modification" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000002334 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0030674
GO:GO:0003723 GO:GO:0006400 eggNOG:COG5082 OrthoDB:EOG4F21BK
GO:GO:0031499 Gene3D:4.10.60.10 InterPro:IPR016713
PIRSF:PIRSF018162 SUPFAM:SSF57756 GeneTree:ENSGT00510000048226
HOGENOM:HOG000000966 KO:K12597 GO:GO:0043629 GO:GO:0071031
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 EMBL:Z74223 EMBL:Z67750 PIR:S61037 RefSeq:NP_010106.1
PDB:2LLI PDB:3NYB PDBsum:2LLI PDBsum:3NYB ProteinModelPortal:Q12476
SMR:Q12476 DIP:DIP-2543N IntAct:Q12476 MINT:MINT-543316
STRING:Q12476 PaxDb:Q12476 PeptideAtlas:Q12476 EnsemblFungi:YDL175C
GeneID:851379 KEGG:sce:YDL175C CYGD:YDL175c
EvolutionaryTrace:Q12476 NextBio:968516 Genevestigator:Q12476
GermOnline:YDL175C Uniprot:Q12476
Length = 344
Score = 134 (52.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 36/133 (27%), Positives = 50/133 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPG-HIASECTTKALCWNCREPGHMAGNCPNEGI-- 103
C NC + GH ++CP++ IC CG H + C C C E GH CP++
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQCPHKWKKV 121
Query: 104 -CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDC 162
C C H C P + + + +N + T C NC GH DC
Sbjct: 122 QCTLCKSKKHSKERC--PSIWRAYILVDDNEKAKPKVLPFHTI--YCYNCGGKGHFGDDC 177
Query: 163 PNDPICNLCNVSG 175
+ N G
Sbjct: 178 KEKRSSRVPNEDG 190
Score = 114 (45.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 149 CNNCRKTGHLARDCPNDPICNLCNVSG-HVARHCPK 183
CNNC + GHL +DCP+ IC+ C + H +RHCPK
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPK 97
Score = 114 (45.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 130 CNNCYKQGHFAADCTNDKACNNCRKTG-HLARDCPNDPICNLCNVSGHVARHCP 182
CNNC ++GH DC + C+ C T H +R CP C+ C+ GH CP
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQCP 115
Score = 64 (27.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 235 CHNCGGRGHLAYECPSGR 252
C+NCGG+GH +C R
Sbjct: 164 CYNCGGKGHFGDDCKEKR 181
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 213 IVCRNCQQLGHMSRDC 228
I C NC GH DC
Sbjct: 162 IYCYNCGGKGHFGDDC 177
>ZFIN|ZDB-GENE-031030-9 [details] [associations]
symbol:zcchc9 "zinc finger, CCHC domain containing 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 ZFIN:ZDB-GENE-031030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 HOGENOM:HOG000059608 CTD:84240
HOVERGEN:HBG056034 OrthoDB:EOG49W2G3 EMBL:BC049028 IPI:IPI00484605
RefSeq:NP_938184.1 UniGene:Dr.79609 ProteinModelPortal:Q7ZUI6
STRING:Q7ZUI6 GeneID:386639 KEGG:dre:386639 InParanoid:Q7ZUI6
NextBio:20813967 ArrayExpress:Q7ZUI6 Uniprot:Q7ZUI6
Length = 256
Score = 135 (52.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/129 (30%), Positives = 51/129 (39%)
Query: 43 QSNL-CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKALCWNCREPGH 93
+SN+ C NC++PGH +CP IC+ CG H C K +P
Sbjct: 112 KSNMICFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKV------DPA- 164
Query: 94 MAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRL---CNNCYKQGHFAADCTNDKACN 150
GN P C CG+ GH ++ C P P G C C HF DC +
Sbjct: 165 -MGNYPYAK-CFVCGQTGHLSKAC--PDNPKGLYAAGGCCRVCGSVEHFQKDCPEHQNST 220
Query: 151 NCRKTGHLA 159
N G L+
Sbjct: 221 NSITLGRLS 229
Score = 129 (50.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 84 LCWNCREPGHMAGNCP---NE-----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C+NCR+PGH +CP N+ GIC+ CG H + C A P + N Y
Sbjct: 116 ICFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPA----MGNYPYA 171
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDP--------ICNLCNVSGHVARHCPK 183
+ C C +TGHL++ CP++P C +C H + CP+
Sbjct: 172 K------------CFVCGQTGHLSKACPDNPKGLYAAGGCCRVCGSVEHFQKDCPE 215
>WB|WBGene00043995 [details] [associations]
symbol:F40F12.9 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:Z30215
GeneTree:ENSGT00390000010943 RefSeq:NP_001255048.1
ProteinModelPortal:D5MCP3 SMR:D5MCP3 EnsemblMetazoa:F40F12.9a.1
EnsemblMetazoa:F40F12.9a.2 GeneID:259311 KEGG:cel:CELE_F40F12.9
CTD:259311 WormBase:F40F12.9a Uniprot:D5MCP3
Length = 113
Score = 115 (45.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 214 VCRNCQQLGHMSRDCMGPL-MVCHNCGGRGHLAYECPS 250
+C NC +LGHMSRDC C CG RGH ECPS
Sbjct: 28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPS 65
Score = 103 (41.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 149 CNNCRKTGHLARDCPND-P-ICNLCNVSGHVARHCP 182
C NC K GH++RDCP + P C C GH R CP
Sbjct: 29 CYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECP 64
Score = 101 (40.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 129 LCNNCYKQGHFAADCTND--KACNNCRKTGHLARDCPN 164
+C NC+K GH + DC + KAC C GH R+CP+
Sbjct: 28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPS 65
Score = 98 (39.6 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 82 KALCWNCREPGHMAGNCPNEG--ICHTCGKAGHRARDC 117
+++C+NC + GHM+ +CP E C CG GH R+C
Sbjct: 26 QSICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYREC 63
Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 43 QSNLCKNCKRPGHFARECPNVA--ICHNCGLPGHIASECTTK 82
+ ++C NC + GH +R+CP C CG GH EC ++
Sbjct: 25 EQSICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPSQ 66
>UNIPROTKB|F1ST82 [details] [associations]
symbol:ZCCHC7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 KO:K12597 OMA:EAQIANN EMBL:CU855828
EMBL:CU861930 RefSeq:XP_003122068.1 Ensembl:ENSSSCT00000005885
GeneID:100520354 KEGG:ssc:100520354 Uniprot:F1ST82
Length = 545
Score = 119 (46.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 34/111 (30%), Positives = 43/111 (38%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC----TTKALCWNCREPGHMAGNCPNEG 102
C C GH CP C +C LP A C + + C C GH A CP
Sbjct: 265 CCLCSERGHLQYACP-ARFCLDCSLPMSSAHRCLERPSWRKRCDRCDMIGHYADACPEIW 323
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACN 150
H K G + P P G L C NC ++GH+ +CT + N
Sbjct: 324 RQYHLTTKPGPPKK----PKTPSGQSTLVYCYNCGQEGHYGHECTERRMFN 370
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRFLD 255
+ CRNC + GH+S++C P V C C RGHL Y CP+ LD
Sbjct: 241 VTCRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLD 285
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 34/124 (27%), Positives = 48/124 (38%)
Query: 47 CKNCKRPGHFARECP---NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNC---PN 100
C+NC + GH ++ CP V C C GH+ C + C +C P A C P+
Sbjct: 243 CRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPAR-FCLDCSLPMSSAHRCLERPS 301
Query: 101 -EGICHTCGKAGHRARDCTAPPL-PPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
C C GH A C P + L K+ + + C NC + GH
Sbjct: 302 WRKRCDRCDMIGHYADAC--PEIWRQYHLTTKPGPPKKPKTPSGQSTLVYCYNCGQEGHY 359
Query: 159 ARDC 162
+C
Sbjct: 360 GHEC 363
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C P P +R C C ++GH C + C +C
Sbjct: 238 NKNVTCRNCNKCGHLSKNC---PFPQ-KVRPCCLCSERGHLQYACPA-RFCLDCSLPMSS 292
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
A C P C+ C++ GH A CP+
Sbjct: 293 AHRCLERPSWRKRCDRCDMIGHYADACPE 321
Score = 67 (28.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NCG GH +EC R ++
Sbjct: 347 LVYCYNCGQEGHYGHECTERRMFNQ 371
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 213 IVCRNCQQLGHMSRDC 228
+ C NC Q GH +C
Sbjct: 348 VYCYNCGQEGHYGHEC 363
>UNIPROTKB|F6V033 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:AAEX03002099 RefSeq:XP_536305.1 Ensembl:ENSCAFT00000013818
GeneID:479161 KEGG:cfa:479161 Uniprot:F6V033
Length = 271
Score = 129 (50.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/131 (28%), Positives = 51/131 (38%)
Query: 46 LCKNCKRPGHFARECP--------NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP IC+ CG H ++C K +P G
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKV------DPA--LGE 180
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P P G D C C HF DC + +
Sbjct: 181 FPFAK-CFVCGEMGHLSRSC--PDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVT 237
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 238 VGRWAKGMSAD 248
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/116 (30%), Positives = 48/116 (41%)
Query: 84 LCWNCREPGHMAGNCP----NE----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C++CR+PGH +CP N+ GIC+ CG H C A P
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPA----------- 177
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDP--------ICNLCNVSGHVARHCPK 183
G F C C + GHL+R CP++P C LC H + CP+
Sbjct: 178 LGEFPF-----AKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPE 228
Score = 115 (45.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/132 (27%), Positives = 48/132 (36%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C P + G
Sbjct: 107 LKKDSRREGRRLKRQAAKKNAMVCFHCRKPGHGIADC-----------PAALENQDMGTG 155
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDKA-------CNN 151
IC+ CG H C A P L C C + GH + C N K C
Sbjct: 156 ICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRL 215
Query: 152 CRKTGHLARDCP 163
C H +DCP
Sbjct: 216 CGSVEHFKKDCP 227
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 121 (47.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 38/143 (26%), Positives = 53/143 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKA--LCWNCREP---GHMAGNCPNE 101
C++ PG +C C N G+ H+ EC+ + L C +P G NC E
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQNGGICHHVTGECSCPSGWLGTVCGQPCPEGRFGKNCSQE 280
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARD 161
CH G C P G+ R + C G + C C N K H++
Sbjct: 281 CQCHNGGTCDAATGQCHCSPGYTGE-RCQDEC-PVGTYGVRCAETCQCVNGGKCYHVSGS 338
Query: 162 CPNDPICNLCNVSGHV-ARHCPK 183
C +C H AR CP+
Sbjct: 339 C----LCEAGFAGEHCEARLCPE 357
Score = 100 (40.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 26/110 (23%), Positives = 40/110 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNE 101
C++ G + +C C N H+ EC T A C + PG C
Sbjct: 178 CEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQR 237
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C+ P G + C +G F +C+ + C+N
Sbjct: 238 CPCQNGGICHHVTGECSCPSGWLGTV--CGQPCPEGRFGKNCSQECQCHN 285
Score = 57 (25.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 626 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 665
>UNIPROTKB|F1PQG8 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
Ensembl:ENSCAFT00000039080 OMA:ILIRNET Uniprot:F1PQG8
Length = 280
Score = 127 (49.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 207 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 264
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 212 CFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 262
>UNIPROTKB|J9P281 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
Ensembl:ENSCAFT00000048621 Uniprot:J9P281
Length = 291
Score = 127 (49.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 218 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 275
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 223 CFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 273
>UNIPROTKB|F1RF07 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:CU928538 RefSeq:NP_001231149.1 UniGene:Ssc.1803
Ensembl:ENSSSCT00000015433 GeneID:100514154 KEGG:ssc:100514154
Uniprot:F1RF07
Length = 270
Score = 125 (49.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/131 (28%), Positives = 50/131 (38%)
Query: 46 LCKNCKRPGHFARECP--------NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP IC+ CG H +C + +P G
Sbjct: 128 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQV------DPA--LGE 179
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P P G D C C HF DC K +
Sbjct: 180 FPFAK-CFVCGEMGHLSRSC--PDNPKGLYADGGCCRLCGSVEHFKKDCPESKNSDQMVT 236
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 237 VGRWAKGMSAD 247
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/116 (30%), Positives = 48/116 (41%)
Query: 84 LCWNCREPGHMAGNCP----NE----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C++CR+PGH +CP N+ GIC+ CG H C A P
Sbjct: 128 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPA----------- 176
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDP--------ICNLCNVSGHVARHCPK 183
G F C C + GHL+R CP++P C LC H + CP+
Sbjct: 177 LGEFPF-----AKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPE 227
Score = 112 (44.5 bits), Expect = 0.00020, P = 0.00020
Identities = 39/132 (29%), Positives = 51/132 (38%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C AL +E G G
Sbjct: 106 LKKDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADCPA-AL--ENQEMG--------TG 154
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDKA-------CNN 151
IC+ CG H C A P L C C + GH + C N K C
Sbjct: 155 ICYRCGSTEHEIIKCKAQVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRL 214
Query: 152 CRKTGHLARDCP 163
C H +DCP
Sbjct: 215 CGSVEHFKKDCP 226
>UNIPROTKB|G4MQ81 [details] [associations]
symbol:MGG_09256 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597
EMBL:CM001231 RefSeq:XP_003709886.1 ProteinModelPortal:G4MQ81
EnsemblFungi:MGG_09256T0 GeneID:2680192 KEGG:mgr:MGG_09256
Uniprot:G4MQ81
Length = 695
Score = 127 (49.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/78 (34%), Positives = 34/78 (43%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCP 163
C C K GHRA DC PP P C +C Q H +A C C C+ GH+ + CP
Sbjct: 401 CVICAKNGHRANDC--PP--P----TCRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCP 452
Query: 164 NDPICNLCNVSGHVARHC 181
L + +G C
Sbjct: 453 E----KLASAAGEAELEC 466
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 31/122 (25%), Positives = 48/122 (39%)
Query: 43 QSNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
+++ C C + GH A +CP C +C H +++C + C C+ GH+ +CP E
Sbjct: 397 KTDFCVICAKNGHRANDCPPPT-CRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCP-EK 454
Query: 103 ICHTCGKAGHRARDCTAPPLPPGDLR-LCNNCYKQGHFAADCTNDKA-CNNCRKTGHLAR 160
+ G+A C A D L Y + A C +C H
Sbjct: 455 LASAAGEAELECAVCCATDHLEDDCESLWCTYYPDPENIVKVQSIPAFCYSCGADNHFGG 514
Query: 161 DC 162
DC
Sbjct: 515 DC 516
Score = 110 (43.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 130 CNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
C C K GH A DC C +C+ H + CP C C GH+ + CP+
Sbjct: 401 CVICAKNGHRANDCP-PPTCRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCPE 453
Score = 41 (19.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 235 CHNCGGRGHLAYEC 248
C++CG H +C
Sbjct: 503 CYSCGADNHFGGDC 516
>UNIPROTKB|F1S7I8 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:ERPLQDE GeneTree:ENSGT00530000063983 EMBL:CU606854
RefSeq:XP_003134416.1 Ensembl:ENSSSCT00000007891 GeneID:100519451
KEGG:ssc:100519451 Uniprot:F1S7I8
Length = 402
Score = 127 (49.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 329 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 386
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 334 CFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 384
>UNIPROTKB|A1A4J3 [details] [associations]
symbol:ZCCHC3 "Zinc finger, CCHC domain containing 3"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 CTD:85364 eggNOG:NOG263295 HOGENOM:HOG000115679
HOVERGEN:HBG068441 OMA:ERPLQDE OrthoDB:EOG461443 EMBL:DAAA02036379
EMBL:BC126595 IPI:IPI00716774 RefSeq:NP_001073703.1 UniGene:Bt.923
Ensembl:ENSBTAT00000002733 GeneID:507116 KEGG:bta:507116
GeneTree:ENSGT00530000063983 InParanoid:A1A4J3 NextBio:20867907
Uniprot:A1A4J3
Length = 404
Score = 127 (49.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 336 CFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 386
>UNIPROTKB|Q9NUD5 [details] [associations]
symbol:ZCCHC3 "Zinc finger CCHC domain-containing protein
3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL034548 EMBL:BC069238 IPI:IPI00011550
RefSeq:NP_149080.2 UniGene:Hs.28608 UniGene:Hs.603608
ProteinModelPortal:Q9NUD5 SMR:Q9NUD5 IntAct:Q9NUD5
PhosphoSite:Q9NUD5 DMDM:23396534 PaxDb:Q9NUD5 PRIDE:Q9NUD5
Ensembl:ENST00000382352 GeneID:85364 KEGG:hsa:85364 UCSC:uc002wdf.3
CTD:85364 GeneCards:GC20P000278 H-InvDB:HIX0015550
H-InvDB:HIX0138064 HGNC:HGNC:16230 HPA:HPA042972 neXtProt:NX_Q9NUD5
PharmGKB:PA25806 eggNOG:NOG263295 HOGENOM:HOG000115679
HOVERGEN:HBG068441 InParanoid:Q9NUD5 OMA:ERPLQDE OrthoDB:EOG461443
PhylomeDB:Q9NUD5 GenomeRNAi:85364 NextBio:75891 Bgee:Q9NUD5
CleanEx:HS_ZCCHC3 Genevestigator:Q9NUD5 GermOnline:ENSG00000177764
Uniprot:Q9NUD5
Length = 404
Score = 127 (49.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 336 CFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 386
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 117 (46.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 39/145 (26%), Positives = 54/145 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN---CREP---GHMAGNCPN 100
C++ PG +C C N G+ H+ EC+ + W C +P G NC
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPS-GWMGTVCGQPCPEGRFGKNCSQ 279
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLAR 160
E CH G C P G+ R + C G + C C N K H++
Sbjct: 280 ECQCHNGGACDAATGQCHCSPGYTGE-RCQDEC-PVGTYGVRCAETCRCVNGGKCYHVSG 337
Query: 161 DCPNDPICNLCNVSGHV--ARHCPK 183
C +C SG AR CP+
Sbjct: 338 TC----LCE-AGFSGEFCEARLCPE 357
Score = 103 (41.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/110 (24%), Positives = 40/110 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNE 101
C++ G + +C C N HI EC T A C + PG C
Sbjct: 178 CEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPQCEQR 237
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C+ P G + C +G F +C+ + C+N
Sbjct: 238 CPCQNGGVCHHVTGECSCPSGWMGTV--CGQPCPEGRFGKNCSQECQCHN 285
Score = 57 (25.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 626 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 665
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 117 (46.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 39/145 (26%), Positives = 54/145 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN---CREP---GHMAGNCPN 100
C++ PG C C N G+ H+ EC+ + W C +P G NC
Sbjct: 221 CEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECSCPS-GWMGTVCGQPCPEGRFGKNCSQ 279
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLAR 160
E CH G C P G+ R + C G + C C N K H++
Sbjct: 280 ECQCHNGGTCDAATGQCHCSPGYTGE-RCQDEC-PVGSYGVRCAEACRCVNGGKCYHVSG 337
Query: 161 DCPNDPICNLCNVSGHV--ARHCPK 183
C +C SG + AR CP+
Sbjct: 338 TC----LCE-AGFSGELCEARLCPE 357
Score = 104 (41.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 27/110 (24%), Positives = 41/110 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNE 101
C++ G + +C C N HI EC T A C + PG +C
Sbjct: 178 CEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHCEQR 237
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C+ P G + C +G F +C+ + C+N
Sbjct: 238 CPCQNGGVCHHVTGECSCPSGWMGTV--CGQPCPEGRFGKNCSQECQCHN 285
Score = 57 (25.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 626 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 665
>UNIPROTKB|F1ML79 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:DSQEVRE GeneTree:ENSGT00510000047308 EMBL:DAAA02021025
IPI:IPI00689669 UniGene:Bt.61596 Ensembl:ENSBTAT00000006931
Uniprot:F1ML79
Length = 271
Score = 123 (48.4 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 84 LCWNCREPGHMAGNCP----NE----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C++CR+PGH +CP N+ GIC+ CG H C A P
Sbjct: 129 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPA----------- 177
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDPI--------CNLCNVSGHVARHCPK 183
G F C C + GHL+R CP++P C LC H+ + CP+
Sbjct: 178 LGEFPF-----AKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPE 228
Score = 119 (46.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/131 (27%), Positives = 50/131 (38%)
Query: 46 LCKNCKRPGHFARECP--------NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP IC+ CG H ++C K +P G
Sbjct: 129 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKV------DPA--LGE 180
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P P G D C C H DC + +
Sbjct: 181 FPFAK-CFVCGEMGHLSRSC--PDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRVVT 237
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 238 VGRWAKGMSAD 248
Score = 116 (45.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/132 (29%), Positives = 52/132 (39%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C AL +E G G
Sbjct: 107 LKKDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADCPA-AL--ENQEMG--------TG 155
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDKA-------CNN 151
IC+ CG H C A P L C C + GH + C N K C
Sbjct: 156 ICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRL 215
Query: 152 CRKTGHLARDCP 163
C H+ +DCP
Sbjct: 216 CGSVEHMKKDCP 227
>UNIPROTKB|E1BZR6 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010923 "negative
regulation of phosphatase activity" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0010923 CTD:84240 OMA:DSQEVRE
GeneTree:ENSGT00510000047308 EMBL:AADN02047870 IPI:IPI00571897
RefSeq:XP_424900.1 UniGene:Gga.34920 Ensembl:ENSGALT00000025157
GeneID:427320 KEGG:gga:427320 NextBio:20828598 Uniprot:E1BZR6
Length = 235
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/116 (30%), Positives = 47/116 (40%)
Query: 84 LCWNCREPGHMAGNCP--------NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C++CREPGH +CP GIC+ CG H C A + P
Sbjct: 94 VCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAK-IDPA---------- 142
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDP--------ICNLCNVSGHVARHCPK 183
G F C C + GHL+R CP++P C LC H + CP+
Sbjct: 143 VGAFPY-----AKCFICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEHYRKDCPE 193
Score = 117 (46.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/113 (29%), Positives = 46/113 (40%)
Query: 46 LCKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C+ PGH +CP V IC+ CG H +C K +P G
Sbjct: 94 VCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKI------DPA--VGA 145
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDK 147
P C CG+ GH +R C P P G + C C H+ DC ++
Sbjct: 146 FPYAK-CFICGEMGHLSRSC--PDNPKGLYAEGGCCRLCGSVEHYRKDCPENQ 195
>UNIPROTKB|E2RIR0 [details] [associations]
symbol:ZCCHC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 OMA:EAQIANN EMBL:AAEX03007966
Ensembl:ENSCAFT00000003709 Uniprot:E2RIR0
Length = 418
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 33/111 (29%), Positives = 41/111 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH CP C C LP C ++ C C GH A CP
Sbjct: 265 CCLCSERGHLQYACP-ARFCLGCSLPMSSTHRCLERSSWRKRCDRCDMIGHYADACPEIW 323
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACN 150
H K G + P P G L C NC ++GH+ +CT + N
Sbjct: 324 RQYHLTTKPGPPKK----PKTPSGQSALVYCYNCGQEGHYGHECTERRMFN 370
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRF 253
+ CRNC + GH+S++C P V C C RGHL Y CP+ RF
Sbjct: 241 VTCRNCDKCGHLSKNCPLPQKVRPCCLCSERGHLQYACPA-RF 282
Score = 99 (39.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C PLP +R C C ++GH C + C C
Sbjct: 238 NKNVTCRNCDKCGHLSKNC---PLPQ-KVRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
C C+ C++ GH A CP+
Sbjct: 293 THRCLERSSWRKRCDRCDMIGHYADACPE 321
Score = 91 (37.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 85 CWNCREPGHMAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNC---YKQGH 138
C NC + GH++ NCP + + C C + GH C A R C C H
Sbjct: 243 CRNCDKCGHLSKNCPLPQKVRPCCLCSERGHLQYACPA--------RFCLGCSLPMSSTH 294
Query: 139 FAADCTN-DKACNNCRKTGHLARDCP 163
+ ++ K C+ C GH A CP
Sbjct: 295 RCLERSSWRKRCDRCDMIGHYADACP 320
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NCG GH +EC R ++
Sbjct: 347 LVYCYNCGQEGHYGHECTERRMFNQ 371
Score = 48 (22.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 213 IVCRNCQQLGHMSRDC 228
+ C NC Q GH +C
Sbjct: 348 VYCYNCGQEGHYGHEC 363
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 116 (45.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/144 (27%), Positives = 53/144 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKA--LCWNCREP---GHMAGNCPNE 101
C++ PG +C C N G+ H+ EC+ L C +P G NC E
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPPGWLGTVCGQPCPEGRFGKNCSQE 280
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARD 161
CH G C P G+ R + C G + C C N K H++
Sbjct: 281 CQCHNGGTCDAATGQCHCSPGYTGE-RCQDEC-PVGTYGVHCAETCQCINGGKCYHVSGS 338
Query: 162 CPNDPICNLCNVSGH--VARHCPK 183
C +C SG AR CP+
Sbjct: 339 C----LCE-AGFSGDRCEARLCPE 357
Score = 108 (43.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 27/109 (24%), Positives = 42/109 (38%)
Query: 48 KNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNEG 102
+ C++ G + +C C N H+ EC T A C + PG C
Sbjct: 180 ERCEQ-GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRC 238
Query: 103 ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C+ PP G + C +G F +C+ + C+N
Sbjct: 239 PCQNGGVCHHVTGECSCPPGWLGTV--CGQPCPEGRFGKNCSQECQCHN 285
Score = 57 (25.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 626 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 665
>UNIPROTKB|Q8N567 [details] [associations]
symbol:ZCCHC9 "Zinc finger CCHC domain-containing protein
9" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IDA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CH471084 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 EMBL:AK314160 EMBL:AL512712
EMBL:BC032736 IPI:IPI00410284 RefSeq:NP_001124507.1
RefSeq:NP_001124508.1 RefSeq:NP_115656.1 UniGene:Hs.15536
ProteinModelPortal:Q8N567 SMR:Q8N567 IntAct:Q8N567
PhosphoSite:Q8N567 DMDM:116242852 PaxDb:Q8N567 PRIDE:Q8N567
Ensembl:ENST00000254037 Ensembl:ENST00000380199
Ensembl:ENST00000407610 Ensembl:ENST00000438268 GeneID:84240
KEGG:hsa:84240 UCSC:uc003khi.3 CTD:84240 GeneCards:GC05P080597
HGNC:HGNC:25424 HPA:HPA038404 neXtProt:NX_Q8N567
PharmGKB:PA134931870 HOVERGEN:HBG056034 InParanoid:Q8N567
OMA:DSQEVRE OrthoDB:EOG49W2G3 PhylomeDB:Q8N567 GenomeRNAi:84240
NextBio:73713 Bgee:Q8N567 CleanEx:HS_ZCCHC9 Genevestigator:Q8N567
GermOnline:ENSG00000131732 Uniprot:Q8N567
Length = 271
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 84 LCWNCREPGHMAGNCP----NE----GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYK 135
+C++CR+PGH +CP N+ GIC+ CG H C A P
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPA----------- 177
Query: 136 QGHFAADCTNDKACNNCRKTGHLARDCPNDPI--------CNLCNVSGHVARHCPK 183
G F C C + GHL+R CP++P C LC H+ + CP+
Sbjct: 178 LGEFPF-----AKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 119 (46.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/131 (27%), Positives = 49/131 (37%)
Query: 46 LCKNCKRPGHFARECP--------NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP IC+ CG H ++C K +P G
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKV------DPA--LGE 180
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P P G D C C H DC +
Sbjct: 181 FPFAK-CFVCGEMGHLSRSC--PDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVT 237
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 238 VGRWAKGMSAD 248
Score = 119 (46.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/132 (28%), Positives = 49/132 (37%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C P + G
Sbjct: 107 LKKDSRREGRRLKRQAAKKNAMVCFHCRKPGHGIADC-----------PAALENQDMGTG 155
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDKA-------CNN 151
IC+ CG H C A P L C C + GH + C N K C
Sbjct: 156 ICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKL 215
Query: 152 CRKTGHLARDCP 163
C HL +DCP
Sbjct: 216 CGSVEHLKKDCP 227
>RGD|1585203 [details] [associations]
symbol:Zcchc3 "zinc finger, CCHC domain containing 3"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:1585203 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH474050
Gene3D:4.10.60.10 SUPFAM:SSF57756 CTD:85364 OMA:ERPLQDE
OrthoDB:EOG461443 GeneTree:ENSGT00530000063983 IPI:IPI00957928
RefSeq:XP_001072887.2 RefSeq:XP_002726297.1
Ensembl:ENSRNOT00000009859 GeneID:690005 KEGG:rno:690005
UCSC:RGD:1585203 NextBio:739977 Uniprot:D3ZZ10
Length = 400
Score = 124 (48.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 125 GDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
G + C C + H + CT D+ C C + GHL+ C +CNLC GH CPK
Sbjct: 327 GQPKTCFKCGSRTHMSGTCTQDR-CFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPK 384
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEGICHTCGKAGHRARDC 117
C CG H++ CT C+ C E GH++ C +C+ CGK GH C
Sbjct: 332 CFKCGSRTHMSGTCTQDR-CFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQC 382
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 114 (45.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 38/143 (26%), Positives = 50/143 (34%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------TTKALCWN-CREPGHMAGNC 98
C++ PG +C C N G+ H+ EC T +C C E G NC
Sbjct: 221 CEDLCPPGKHGPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPE-GRYGNNC 279
Query: 99 PNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
E CH G C P G+ R + C G + C C N K H+
Sbjct: 280 SQECQCHNGGICDSATGQCHCSPGYTGE-RCQDEC-PVGTYGVRCAETCQCMNGGKCYHI 337
Query: 159 ARDCPNDPICNLCNVSGHVARHC 181
+ C LC G+ HC
Sbjct: 338 SGAC-------LCE-PGYTGEHC 352
Score = 101 (40.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 25/109 (22%), Positives = 39/109 (35%)
Query: 48 KNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNEG 102
+ C + G + +C C N H+ EC T A C + PG C
Sbjct: 180 ERCDQ-GTYGNDCHQKCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEERC 238
Query: 103 ICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C PP +C +G + +C+ + C+N
Sbjct: 239 PCQNGGICHHVTGECACPPGWMTQGMVCGQPCPEGRYGNNCSQECQCHN 287
Score = 57 (25.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 628 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 667
Score = 46 (21.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRG-HLAYECPSGRF 253
CRN H+S C C G G H +CP G +
Sbjct: 763 CRNGADCDHISGQC-----TCRT-GFMGKHCEQKCPQGTY 796
>MGI|MGI:1916335 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010923 "negative regulation of
phosphatase activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1916335 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
EMBL:BC010687 EMBL:BC024496 IPI:IPI00122218 RefSeq:NP_663428.2
UniGene:Mm.52356 ProteinModelPortal:Q8R1J3 SMR:Q8R1J3
PhosphoSite:Q8R1J3 PRIDE:Q8R1J3 GeneID:69085 KEGG:mmu:69085
UCSC:uc007rkb.1 InParanoid:Q8R1J3 NextBio:328566 Bgee:Q8R1J3
CleanEx:MM_ZCCHC9 Genevestigator:Q8R1J3
GermOnline:ENSMUSG00000021621 Uniprot:Q8R1J3
Length = 273
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/131 (28%), Positives = 51/131 (38%)
Query: 46 LCKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP V IC+ CG H S+C +P G
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANV------DPA--LGE 180
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P G D C C HF DC ++ +
Sbjct: 181 FPFAK-CFVCGEMGHLSRSC--PDNTKGVYADGGSCKLCGSVEHFKKDCRENQNSDRIIT 237
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 238 VGRWAKGMSAD 248
Score = 108 (43.1 bits), Expect = 0.00061, P = 0.00061
Identities = 35/131 (26%), Positives = 48/131 (36%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C P + G
Sbjct: 107 LKKDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADC-----------PAVLESQDMGTG 155
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDK-------ACNN 151
IC+ CG H C A P L C C + GH + C N K +C
Sbjct: 156 ICYRCGSTEHEMSKCRANVDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKL 215
Query: 152 CRKTGHLARDC 162
C H +DC
Sbjct: 216 CGSVEHFKKDC 226
>RGD|735084 [details] [associations]
symbol:Megf10 "multiple EGF-like domains 10" species:10116
"Rattus norvegicus" [GO:0001891 "phagocytic cup" evidence=ISO]
[GO:0014719 "satellite cell activation" evidence=ISO] [GO:0014816
"satellite cell differentiation" evidence=ISO] [GO:0014841
"satellite cell proliferation" evidence=ISO] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042552 "myelination"
evidence=NAS] [GO:0043654 "recognition of apoptotic cell"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:735084 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130 Pfam:PF12661
HSSP:P01132 OrthoDB:EOG42JNQJ IPI:IPI00371424 UniGene:Rn.224926
EMBL:L41686 ProteinModelPortal:Q63404 PhosphoSite:Q63404
UCSC:RGD:735084 HOVERGEN:HBG072163 InParanoid:Q63404
Genevestigator:Q63404 Uniprot:Q63404
Length = 220
Score = 117 (46.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/145 (26%), Positives = 54/145 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN---CREP---GHMAGNCPN 100
C++ PG +C C N G+ H+ EC+ + W C +P G NC
Sbjct: 23 CEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPS-GWMGTVCGQPCPEGRFGKNCSQ 81
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLAR 160
E CH G C P G+ R + C G + C C N K H++
Sbjct: 82 ECQCHNGGACDAATGQCHCSPGYTGE-RCQDEC-PVGTYGVRCAETCRCVNGGKCYHVSG 139
Query: 161 DCPNDPICNLCNVSGHV--ARHCPK 183
C +C SG AR CP+
Sbjct: 140 TC----LCE-AGFSGEFCEARLCPE 159
>TAIR|locus:2057295 [details] [associations]
symbol:AT2G12880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AC006437
EMBL:AC007155 IPI:IPI00547403 PIR:C84504 RefSeq:NP_178944.1
UniGene:At.52721 ProteinModelPortal:Q9SKG2 SMR:Q9SKG2 PRIDE:Q9SKG2
EnsemblPlants:AT2G12880.1 GeneID:815767 KEGG:ath:AT2G12880
TAIR:At2g12880 eggNOG:KOG4400 InParanoid:Q9SKG2 PhylomeDB:Q9SKG2
ArrayExpress:Q9SKG2 Genevestigator:Q9SKG2 Uniprot:Q9SKG2
Length = 119
Score = 101 (40.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL-CWNCREPGHMAGNCPNE---- 101
C C + GHFAR C H+ ++ TT + C+ C E GH + CPN+
Sbjct: 36 CYKCGKLGHFARSC-------------HVVTQPTTAYITCYFCSEEGHRSNGCPNKRTDQ 82
Query: 102 ----GICHTCGKAGHR 113
G C+ CG HR
Sbjct: 83 VNPKGHCYWCGNQDHR 98
Score = 91 (37.1 bits), Expect = 0.00042, P = 0.00042
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGH 157
C+ CGK GH AR C P C C ++GH + C N K + GH
Sbjct: 36 CYKCGKLGHFARSCHVVTQPTTAYITCYFCSEEGHRSNGCPN-KRTDQVNPKGH 88
>ASPGD|ASPL0000046912 [details] [associations]
symbol:AN1944 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:BN001307
GO:GO:0008270 GO:GO:0003676 EMBL:AACD01000029 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_659548.1
EnsemblFungi:CADANIAT00008604 GeneID:2875623 KEGG:ani:AN1944.2
HOGENOM:HOG000192719 OMA:SASEIPC OrthoDB:EOG498Z8B Uniprot:Q5BBY6
Length = 690
Score = 124 (48.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 39/127 (30%), Positives = 49/127 (38%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPG-HIASECTTKALCWNCREPGHMAGNCPN----- 100
C C + GH A CP C +CG H +S C C CR GH A +CP+
Sbjct: 362 CMECLQEGHLAEVCPTRE-CVHCGAWNKHQSSLCPKFRRCQRCRGRGHDAKDCPSALKSS 420
Query: 101 --EGICHTCGKAGHRARDCTAP-PLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGH 157
E C CG A H DC LP +Q + +C +C H
Sbjct: 421 ASEIPCDLCGSADHLEYDCDYLWKLP-----------RQDTTSLPVLVSISCAHCTSNRH 469
Query: 158 LARDCPN 164
L DCP+
Sbjct: 470 LIGDCPS 476
>UNIPROTKB|F1M989 [details] [associations]
symbol:Zcchc7 "Zinc finger CCHC domain-containing protein
7" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:1310467 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 IPI:IPI00768279
Ensembl:ENSRNOT00000017707 ArrayExpress:F1M989 Uniprot:F1M989
Length = 512
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 34/116 (29%), Positives = 43/116 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH CP C +C LP C ++ C C GH A CP
Sbjct: 232 CCLCSERGHLQYGCP-ARYCLDCSLPMSSTHRCFERSSWRKRCDRCDMIGHYADACPEIW 290
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACNNCRKT 155
H K G + P P G L C NC ++GH+ +CT + N T
Sbjct: 291 RQYHLTTKPGPPKK----PKTPSGQSALVYCYNCAQKGHYGHECTERRMFNQAFPT 342
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRFLD 255
+ CRNC + GH+S++C P V C C RGHL Y CP+ LD
Sbjct: 208 VTCRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARYCLD 252
Score = 99 (39.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C PLP +R C C ++GH C + C +C
Sbjct: 205 NKNVTCRNCDKRGHLSKNC---PLPQ-KVRPCCLCSERGHLQYGCPA-RYCLDCSLPMSS 259
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
C C+ C++ GH A CP+
Sbjct: 260 THRCFERSSWRKRCDRCDMIGHYADACPE 288
Score = 92 (37.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 85 CWNCREPGHMAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNN--CYKQGHF 139
C NC + GH++ NCP + + C C + GH C A L + + C+++ +
Sbjct: 210 CRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARYCLDCSLPMSSTHRCFERSSW 269
Query: 140 AADCTNDKACNNCRKTGHLARDCP 163
K C+ C GH A CP
Sbjct: 270 R------KRCDRCDMIGHYADACP 287
Score = 63 (27.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NC +GH +EC R ++
Sbjct: 314 LVYCYNCAQKGHYGHECTERRMFNQ 338
Score = 50 (22.7 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 213 IVCRNCQQLGHMSRDC 228
+ C NC Q GH +C
Sbjct: 315 VYCYNCAQKGHYGHEC 330
>RGD|1310467 [details] [associations]
symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:1310467 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K12597 EMBL:CH473962 CTD:84186 HOGENOM:HOG000155768
OrthoDB:EOG4P5KBB EMBL:BC161967 IPI:IPI00768279
RefSeq:NP_001100128.1 UniGene:Rn.56971 ProteinModelPortal:B1WC15
PhosphoSite:B1WC15 PRIDE:B1WC15 GeneID:298086 KEGG:rno:298086
UCSC:RGD:1310467 NextBio:643136 ArrayExpress:B1WC15
Genevestigator:B1WC15 Uniprot:B1WC15
Length = 542
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 34/116 (29%), Positives = 43/116 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH CP C +C LP C ++ C C GH A CP
Sbjct: 262 CCLCSERGHLQYGCP-ARYCLDCSLPMSSTHRCFERSSWRKRCDRCDMIGHYADACPEIW 320
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACNNCRKT 155
H K G + P P G L C NC ++GH+ +CT + N T
Sbjct: 321 RQYHLTTKPGPPKK----PKTPSGQSALVYCYNCAQKGHYGHECTERRMFNQAFPT 372
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRFLD 255
+ CRNC + GH+S++C P V C C RGHL Y CP+ LD
Sbjct: 238 VTCRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARYCLD 282
Score = 99 (39.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C PLP +R C C ++GH C + C +C
Sbjct: 235 NKNVTCRNCDKRGHLSKNC---PLPQ-KVRPCCLCSERGHLQYGCPA-RYCLDCSLPMSS 289
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
C C+ C++ GH A CP+
Sbjct: 290 THRCFERSSWRKRCDRCDMIGHYADACPE 318
Score = 92 (37.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 85 CWNCREPGHMAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNN--CYKQGHF 139
C NC + GH++ NCP + + C C + GH C A L + + C+++ +
Sbjct: 240 CRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARYCLDCSLPMSSTHRCFERSSW 299
Query: 140 AADCTNDKACNNCRKTGHLARDCP 163
K C+ C GH A CP
Sbjct: 300 R------KRCDRCDMIGHYADACP 317
Score = 63 (27.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NC +GH +EC R ++
Sbjct: 344 LVYCYNCAQKGHYGHECTERRMFNQ 368
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 110 (43.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 38/145 (26%), Positives = 54/145 (37%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN---CREP---GHMAGNCPN 100
C++ PG +C C N G+ H+ EC+ + W C +P G NC
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPS-GWMGTVCGQPCPEGRFGKNCSQ 279
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLAR 160
E CH G C P G+ R + C G + C C N K H++
Sbjct: 280 ECQCHNGGTCDAATGQCHCSPGYTGE-RCQDEC-PVGTYGVLCAETCQCVNGGKCYHVSG 337
Query: 161 DCPNDPICNLCNVSGH--VARHCPK 183
C +C +G AR CP+
Sbjct: 338 AC----LCE-AGFAGERCEARLCPE 357
Score = 102 (41.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 26/110 (23%), Positives = 40/110 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNE 101
C++ G + +C C N H+ EC T A C + PG C
Sbjct: 178 CEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQR 237
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNN 151
C G H +C+ P G + C +G F +C+ + C+N
Sbjct: 238 CPCQNGGVCHHVTGECSCPSGWMGTV--CGQPCPEGRFGKNCSQECQCHN 285
Score = 57 (25.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 216 RNCQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
+ C Q H S C +C +C G G L E CPSGRF
Sbjct: 626 QTCPQCVHSSGPCHHITGLC-DCLPGFTGALCNEVCPSGRF 665
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 215 CRNCQQLGHMSRDCMGPLMVCHNCGGRG-HLAYECPSGRF 253
C+N H+S C C G G H +CPSG +
Sbjct: 761 CQNGADCDHISGQC-----TCRT-GFMGRHCEQKCPSGTY 794
>UNIPROTKB|F1MUH8 [details] [associations]
symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
7" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 IPI:IPI00700472 OMA:EAQIANN
EMBL:DAAA02023167 EMBL:DAAA02023168 EMBL:DAAA02023169
EMBL:DAAA02023170 EMBL:DAAA02023171 EMBL:DAAA02023172
EMBL:DAAA02023173 EMBL:DAAA02023174 Ensembl:ENSBTAT00000028791
Uniprot:F1MUH8
Length = 546
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 34/111 (30%), Positives = 41/111 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH CP C C LP C +A C C GH A CP
Sbjct: 265 CCLCSERGHLQYACP-ARFCLGCSLPMSSTHRCLERASWRKRCDRCDMIGHYADACPEIW 323
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACN 150
H K G + P P G L C NC ++GH+ +CT + N
Sbjct: 324 RQYHLTTKPGPPKK----PKTPSGQSTLVYCYNCGQEGHYGHECTERRMFN 370
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRF 253
+ CRNC + GH+S++C P V C C RGHL Y CP+ RF
Sbjct: 241 VTCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA-RF 282
Score = 95 (38.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 25/89 (28%), Positives = 38/89 (42%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C P P +R C C ++GH C + C C
Sbjct: 238 NKNVTCRNCDKCGHLSKNC---PFPQ-KVRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
C C+ C++ GH A CP+
Sbjct: 293 THRCLERASWRKRCDRCDMIGHYADACPE 321
Score = 90 (36.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/86 (30%), Positives = 35/86 (40%)
Query: 85 CWNCREPGHMAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNC---YKQGH 138
C NC + GH++ NCP + + C C + GH C A R C C H
Sbjct: 243 CRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA--------RFCLGCSLPMSSTH 294
Query: 139 FAADCTN-DKACNNCRKTGHLARDCP 163
+ + K C+ C GH A CP
Sbjct: 295 RCLERASWRKRCDRCDMIGHYADACP 320
Score = 67 (28.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NCG GH +EC R ++
Sbjct: 347 LVYCYNCGQEGHYGHECTERRMFNQ 371
>UNIPROTKB|Q2KIN0 [details] [associations]
symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
7" species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597 EMBL:BC112578
IPI:IPI00700472 RefSeq:NP_001039565.1 UniGene:Bt.21210
GeneID:511821 KEGG:bta:511821 CTD:84186 HOGENOM:HOG000155768
InParanoid:Q2KIN0 OrthoDB:EOG4P5KBB NextBio:20870113 Uniprot:Q2KIN0
Length = 546
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 34/111 (30%), Positives = 41/111 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKAL----CWNCREPGHMAGNCPNEG 102
C C GH CP C C LP C +A C C GH A CP
Sbjct: 265 CCLCSERGHLQYACP-ARFCLGCSLPMSSTHRCLERASWRKRCDRCDMIGHYADACPEIW 323
Query: 103 I-CHTCGKAGHRARDCTAPPLPPGDLRL--CNNCYKQGHFAADCTNDKACN 150
H K G + P P G L C NC ++GH+ +CT + N
Sbjct: 324 RQYHLTTKPGPPKK----PKTPSGQSTLVYCYNCGQEGHYGHECTERRMFN 370
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRF 253
+ CRNC + GH+S++C P V C C RGHL Y CP+ RF
Sbjct: 241 VTCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA-RF 282
Score = 95 (38.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 25/89 (28%), Positives = 38/89 (42%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHL 158
N+ + C C K GH +++C P P +R C C ++GH C + C C
Sbjct: 238 NKNVTCRNCDKCGHLSKNC---PFPQ-KVRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292
Query: 159 ARDCPNDPI----CNLCNVSGHVARHCPK 183
C C+ C++ GH A CP+
Sbjct: 293 THRCLERASWRKRCDRCDMIGHYADACPE 321
Score = 90 (36.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/86 (30%), Positives = 35/86 (40%)
Query: 85 CWNCREPGHMAGNCP-NEGI--CHTCGKAGHRARDCTAPPLPPGDLRLCNNC---YKQGH 138
C NC + GH++ NCP + + C C + GH C A R C C H
Sbjct: 243 CRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA--------RFCLGCSLPMSSTH 294
Query: 139 FAADCTN-DKACNNCRKTGHLARDCP 163
+ + K C+ C GH A CP
Sbjct: 295 RCLERASWRKRCDRCDMIGHYADACP 320
Score = 67 (28.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NCG GH +EC R ++
Sbjct: 347 LVYCYNCGQEGHYGHECTERRMFNQ 371
>MGI|MGI:2442912 [details] [associations]
symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:2442912 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH466565
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 KO:K12597 CTD:84186
HOGENOM:HOG000155768 OrthoDB:EOG4P5KBB OMA:EAQIANN EMBL:AK013175
EMBL:AK043238 EMBL:AK050430 EMBL:AK157728 EMBL:AL805896
EMBL:AL805914 EMBL:BC054405 EMBL:BC117020 EMBL:BC117022
EMBL:BC144774 IPI:IPI00112298 IPI:IPI00227238 RefSeq:NP_613056.2
UniGene:Mm.331576 UniGene:Mm.486647 ProteinModelPortal:B1AX39
SMR:B1AX39 STRING:B1AX39 PhosphoSite:B1AX39 PRIDE:B1AX39
Ensembl:ENSMUST00000107824 Ensembl:ENSMUST00000147272 GeneID:319885
KEGG:mmu:319885 UCSC:uc008sry.2 UCSC:uc008ssa.2 InParanoid:B1AX39
ChiTaRS:ZCCHC7 NextBio:395583 Bgee:B1AX39 Genevestigator:B1AX39
Uniprot:B1AX39
Length = 541
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPSGRFLD 255
+ CRNC + GH+S++C P V C C RGHL Y CP+ LD
Sbjct: 236 VTCRNCDKRGHLSKNCPLPQKVRACCLCSERGHLQYGCPARYCLD 280
Score = 98 (39.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 100 NEGI-CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCR---KT 155
N+ + C C K GH +++C PLP +R C C ++GH C + C +C +
Sbjct: 233 NKNVTCRNCDKRGHLSKNC---PLPQ-KVRACCLCSERGHLQYGCPA-RYCLDCSLPMSS 287
Query: 156 GHLARDCPN-DPICNLCNVSGHVARHCPK 183
H + + C+ C++ GH A CP+
Sbjct: 288 NHRCFERLSWRKRCDRCDMIGHHADACPE 316
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/84 (29%), Positives = 36/84 (42%)
Query: 85 CWNCREPGHMAGNCP---NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNN--CYKQGHF 139
C NC + GH++ NCP C C + GH C A L + +N C+++ +
Sbjct: 238 CRNCDKRGHLSKNCPLPQKVRACCLCSERGHLQYGCPARYCLDCSLPMSSNHRCFERLSW 297
Query: 140 AADCTNDKACNNCRKTGHLARDCP 163
K C+ C GH A CP
Sbjct: 298 R------KRCDRCDMIGHHADACP 315
Score = 63 (27.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLDR 256
L+ C+NC +GH +EC R ++
Sbjct: 342 LVYCYNCAQKGHYGHECTERRMFNQ 366
>UNIPROTKB|P69730 [details] [associations]
symbol:gag "Gag polyprotein" species:11670 "Equine
infectious anemia virus (CLONE 1369)" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00607 PROSITE:PS50158
SMART:SM00343 GO:GO:0019048 GO:GO:0046872 GO:GO:0005198
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019028 EMBL:M16575 PIR:A03949 RefSeq:NP_056901.1
ProteinModelPortal:P69730 SMR:P69730 IntAct:P69730 GeneID:1489984
GO:GO:0019076 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
Gene3D:1.10.375.10 InterPro:IPR014834 Pfam:PF08723 SUPFAM:SSF47353
SUPFAM:SSF47943 SUPFAM:SSF47836 Uniprot:P69730
Length = 486
Score = 119 (46.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 66 CHNCGLPGHIASECTTKALCWNCREPGHMAGNC 98
C+NCG PGH++S+C +C+ C++PGH + C
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQC 415
>RGD|1307450 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA;ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:1307450 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0010923
EMBL:CH473955 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
OMA:DSQEVRE OrthoDB:EOG49W2G3 GeneTree:ENSGT00510000047308
EMBL:BC083695 IPI:IPI00555221 RefSeq:NP_001013174.1
UniGene:Rn.94285 Ensembl:ENSRNOT00000020111 GeneID:309986
KEGG:rno:309986 UCSC:RGD:1307450 InParanoid:Q5XII6 NextBio:661527
Genevestigator:Q5XII6 Uniprot:Q5XII6
Length = 271
Score = 115 (45.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/131 (27%), Positives = 51/131 (38%)
Query: 46 LCKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKALCWNCREPGHMAGN 97
+C +C++PGH +CP V IC+ CG H ++C +P G
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANV------DPA--LGE 180
Query: 98 CPNEGICHTCGKAGHRARDCTAPPLPPG---DLRLCNNCYKQGHFAADCTNDKACNNCRK 154
P C CG+ GH +R C P G D C C HF DC ++ +
Sbjct: 181 FPFAK-CFVCGEMGHLSRSC--PDNTKGVYADGGGCKLCGSVEHFKKDCPENQNSDRIIT 237
Query: 155 TGHLARDCPND 165
G A+ D
Sbjct: 238 VGRWAKGMSAD 248
Score = 115 (45.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/134 (26%), Positives = 49/134 (36%)
Query: 46 LCKNCKRPGH-FARECP--NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCPNEG 102
L K+ +R G R+ N +C +C PGH ++C P + G
Sbjct: 107 LKKDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADC-----------PAVLESQDMGTG 155
Query: 103 ICHTCGKAGHRARDCTA---PPLPPGDLRLCNNCYKQGHFAADCT-NDKA-------CNN 151
IC+ CG H C A P L C C + GH + C N K C
Sbjct: 156 ICYRCGSTEHEMTKCRANVDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGGCKL 215
Query: 152 CRKTGHLARDCPND 165
C H +DCP +
Sbjct: 216 CGSVEHFKKDCPEN 229
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 31/111 (27%), Positives = 44/111 (39%)
Query: 84 LCWNCREPGHMAGNCP--------NEGICHTCGKAGHRARDCTA---PPLPPGDLRLCNN 132
+C++CR+PGH +CP GIC+ CG H C A P L C
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAKCFV 188
Query: 133 CYKQGHFAADCTNDKACNNCRKTGHLARDCPNDPICNLCNVSGHVARHCPK 183
C + GH + C ++ T + D C LC H + CP+
Sbjct: 189 CGEMGHLSRSCPDN--------TKGVYADGGG---CKLCGSVEHFKKDCPE 228
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 115 (45.5 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 34/126 (26%), Positives = 46/126 (36%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN---CREP---GHMAGNCPN 100
C++ PG +C C N G+ H+ EC+ A W C +P G NC
Sbjct: 220 CEDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPA-GWMGTVCGQPCPEGRYGRNCSQ 278
Query: 101 EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLAR 160
E CH G C P G+ R C G + C C N K H++
Sbjct: 279 ECQCHNGGTCDSATGQCYCSPGYNGE-RCQEEC-PVGLYGVKCAQTCQCLNGGKCYHISG 336
Query: 161 DCPNDP 166
C +P
Sbjct: 337 ACLCEP 342
Score = 49 (22.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 218 CQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
C Q H + C C +C G G L E CPSGR+
Sbjct: 627 CPQCVHSNGPCHHVTGQC-DCLAGFMGSLCNEVCPSGRY 664
>TAIR|locus:2183607 [details] [associations]
symbol:AT5G36240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AB026661
IPI:IPI00533303 RefSeq:NP_198473.1 UniGene:At.55159
ProteinModelPortal:Q9FG62 SMR:Q9FG62 PaxDb:Q9FG62 PRIDE:Q9FG62
EnsemblPlants:AT5G36240.1 GeneID:833621 KEGG:ath:AT5G36240
TAIR:At5g36240 eggNOG:NOG310171 HOGENOM:HOG000152454
InParanoid:Q9FG62 OMA:EGHFEHQ PhylomeDB:Q9FG62
ProtClustDB:CLSN2916402 Genevestigator:Q9FG62 Uniprot:Q9FG62
Length = 254
Score = 88 (36.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 43/197 (21%), Positives = 59/197 (29%)
Query: 43 QSNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKA-LCWNCREPGHMAGNCPNE 101
++ +C C GH C H L C + LC C EPGH +
Sbjct: 24 EAEVCLRCGGFGHDMTLC-KYEYSHE-DLKNIKCYVCNSLGHLC--CIEPGHTQSWTVS- 78
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARD 161
C+ CG+ GH C C C ++GHF C N + C +
Sbjct: 79 --CYRCGQLGHTGLAC-GRHYDDSVSPSCFICGREGHFEHQCHNSFSV--CFPEDSSEDE 133
Query: 162 C--PNDPICNLC-NV----SGHVARHCPKXXXX---XXXXXXXXXXXXXXXXXXXXXXXX 211
C P+ N GH CP
Sbjct: 134 CQGPDSSSVRFQENTREEEEGHFEHQCPDSSSVCFQEISREEGFISLNSSSKSTSKGRET 193
Query: 212 XIVCRNCQQLGHMSRDC 228
+C C+ GH++RDC
Sbjct: 194 RRLCYECKGKGHIARDC 210
Score = 64 (27.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 234 VCHNCGGRGHLAYECPS 250
+C+ C G+GH+A +CP+
Sbjct: 196 LCYECKGKGHIARDCPN 212
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 29/110 (26%), Positives = 43/110 (39%)
Query: 48 KNCKRPGHFARECPNVAICHNCGLPGHIASECT-----TKALCWNCREPGHMAGNCPNEG 102
+ C++ G + +C C N H+ EC T A C + PG C
Sbjct: 180 ERCEQ-GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRC 238
Query: 103 ICHTCGKAGHRARDCTAPPLPPGDL-RLCNNCYKQGHFAADCTNDKACNN 151
C G H +C P PPG L +C +G F +C+ + C+N
Sbjct: 239 PCQNGGVCHHVTGEC---PCPPGWLGTVCGQPCPEGRFGKNCSQECQCHN 285
>UNIPROTKB|Q8N3Z6 [details] [associations]
symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
7" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:CH471071 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K12597 EMBL:AL158155 CTD:84186 OrthoDB:EOG4P5KBB EMBL:AK026264
EMBL:AK074608 EMBL:AK315128 EMBL:AL512604 EMBL:BC022434
EMBL:BC036940 EMBL:AF161349 IPI:IPI00166710 IPI:IPI00871360
RefSeq:NP_115602.2 UniGene:Hs.654700 ProteinModelPortal:Q8N3Z6
SMR:Q8N3Z6 MINT:MINT-1182798 STRING:Q8N3Z6 PhosphoSite:Q8N3Z6
DMDM:226693603 PaxDb:Q8N3Z6 PRIDE:Q8N3Z6 DNASU:84186
Ensembl:ENST00000322831 Ensembl:ENST00000336755 GeneID:84186
KEGG:hsa:84186 UCSC:uc003zzq.3 UCSC:uc003zzs.1
GeneCards:GC09P037120 HGNC:HGNC:26209 HPA:HPA020600 HPA:HPA021088
HPA:HPA029522 neXtProt:NX_Q8N3Z6 PharmGKB:PA128394734
eggNOG:NOG249334 HOVERGEN:HBG094757 InParanoid:Q8N3Z6 OMA:EAQIANN
GenomeRNAi:84186 NextBio:73566 ArrayExpress:Q8N3Z6 Bgee:Q8N3Z6
CleanEx:HS_ZCCHC7 Genevestigator:Q8N3Z6 GermOnline:ENSG00000147905
Uniprot:Q8N3Z6
Length = 543
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 213 IVCRNCQQLGHMSRDCMGPLMV--CHNCGGRGHLAYECPS 250
I+CRNC + GH+S++C P V C C RGHL Y CP+
Sbjct: 241 IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPA 280
Score = 87 (35.7 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 134 YKQGHFAADCTNDKACNNCRKTGHLARDCP---NDPICNLCNVSGHVARHCP 182
+ Q +++A+ + C NC K GHL+++CP C LC+ GH+ CP
Sbjct: 230 WTQRYYSAN--KNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279
Score = 61 (26.5 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 232 LMVCHNCGGRGHLAYECPSGRFLD 255
L C++C +GH +ECP D
Sbjct: 347 LAYCYHCAQKGHYGHECPEREVYD 370
Score = 39 (18.8 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 215 CRNCQQLGHMSRDC 228
C C LGH + C
Sbjct: 306 CDRCHMLGHYTDAC 319
>TAIR|locus:2149234 [details] [associations]
symbol:AT5G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
IPI:IPI00540792 RefSeq:NP_001078608.1 RefSeq:NP_568393.1
UniGene:At.31217 ProteinModelPortal:F4K466 SMR:F4K466
EnsemblPlants:AT5G20220.1 EnsemblPlants:AT5G20220.2 GeneID:832144
KEGG:ath:AT5G20220 OMA:SIDERPW Uniprot:F4K466
Length = 393
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 38/131 (29%), Positives = 50/131 (38%)
Query: 47 CKNCKRPGHFARECPNVAI-------CHNCGLPGHIASECT-TKALCWNCREPGHMAGNC 98
CKNC + GH CP + C CG GH C +K++ G
Sbjct: 266 CKNCGQEGHRRHYCPELGTNADRKFRCRGCGGKGHNRRTCPKSKSIVTK--------GIS 317
Query: 99 PNEGICHTCGKAGHRARDCTAPPLPPGDLRLCN--NCYKQGHFAADCTNDKACNNCRKTG 156
C CG+ GH +R C P G C+ N + G T AC C+K G
Sbjct: 318 TRYHKCGICGERGHNSRTCRKPT---GVNPSCSGENSGEDG--VGKITY--ACGFCKKMG 370
Query: 157 HLARDCPNDPI 167
H R CP+ +
Sbjct: 371 HNVRTCPSKQV 381
>TAIR|locus:2083936 [details] [associations]
symbol:RS2Z32 "arginine/serine-rich zinc
knuckle-containing protein 32" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA;TAS] [GO:0008380 "RNA
splicing" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0030422 "production of siRNA
involved in RNA interference" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132966
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0000398 HSSP:P52298
HOGENOM:HOG000276234 KO:K12896 EMBL:AY095996 EMBL:BT001034
EMBL:AK316697 IPI:IPI00525747 PIR:F84791 PIR:T45890
RefSeq:NP_190918.3 RefSeq:NP_851015.1 UniGene:At.26777
ProteinModelPortal:Q9FYB7 SMR:Q9FYB7 STRING:Q9FYB7 PRIDE:Q9FYB7
EnsemblPlants:AT3G53500.2 GeneID:824518 KEGG:ath:AT3G53500
TAIR:At3g53500 InParanoid:Q9FYB7 OMA:GSPKENG PhylomeDB:Q9FYB7
ProtClustDB:CLSN2680397 Genevestigator:Q9FYB7 Uniprot:Q9FYB7
Length = 284
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 96 GNCPNEGICHTCGKAGHRARDCTAPPLPPGDLR-LCNNCYKQGHFAADCTNDKACNNCRK 154
G P G C CG GH ARDCTA GD + C C ++GH +C N + R+
Sbjct: 93 GPPPGSGRCFNCGVDGHWARDCTA-----GDWKNKCYRCGERGHIERNCKNSPSPKKARQ 147
Query: 155 TGHLAR 160
G +R
Sbjct: 148 GGSYSR 153
Score = 109 (43.4 bits), Expect = 0.00051, P = 0.00051
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 114 ARDCTAPPLPPGDLRLCNNCYKQGHFAADCT-ND--KACNNCRKTGHLARDCPNDPICNL 170
+RD + PPG R C NC GH+A DCT D C C + GH+ R+C N P
Sbjct: 86 SRDNGSRGPPPGSGR-CFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKK 144
Query: 171 CNVSGHVAR 179
G +R
Sbjct: 145 ARQGGSYSR 153
>UNIPROTKB|D6RAT4 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AC108673 EMBL:AC135587 HGNC:HGNC:13164
ChiTaRS:CNBP IPI:IPI00965541 ProteinModelPortal:D6RAT4 SMR:D6RAT4
Ensembl:ENST00000512338 ArrayExpress:D6RAT4 Bgee:D6RAT4
Uniprot:D6RAT4
Length = 114
Score = 92 (37.4 bits), Expect = 0.00033, P = 0.00033
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 44 SNLCKNCKRPGHFARECPNVAI----CHNCGLPGHIASECTTKALCWNCREPGHMAGNC 98
SN C C R GH+ARECP + G G + +C+ C E GH+A +C
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61
Score = 91 (37.1 bits), Expect = 0.00042, P = 0.00042
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 104 CHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQG-HFAADCTNDKACNNCRKTGHLARDC 162
C CG++GH AR+C P G R + + G F + D C C ++GHLA+DC
Sbjct: 6 CFKCGRSGHWAREC---PTGGGRGRGMRSRGRGGFQFVSSSLPD-ICYRCGESGHLAKDC 61
Score = 90 (36.7 bits), Expect = 0.00055, P = 0.00055
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 66 CHNCGLPGHIASECTT---KALCWNCREPG---HMAGNCPNEGICHTCGKAGHRARDC 117
C CG GH A EC T + R G ++ + P+ IC+ CG++GH A+DC
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPD--ICYRCGESGHLAKDC 61
>UNIPROTKB|P05890 [details] [associations]
symbol:gag "Gag polyprotein" species:11701 "Human
immunodeficiency virus type 1 (RF/HAT ISOLATE)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019061 "uncoating of virus"
evidence=TAS] [GO:0030260 "entry into host cell" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
InterPro:IPR000071 InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343 GO:GO:0005829
Reactome:REACT_116125 GO:GO:0005654 GO:GO:0030430 GO:GO:0046872
GO:GO:0005198 GO:GO:0008270 GO:GO:0003723 GO:GO:0010008
GO:GO:0020002 GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0030260 GO:GO:0042025 GO:GO:0019028 EMBL:M17451 GO:GO:0019076
Gene3D:1.10.1200.30 Gene3D:1.10.150.90 Gene3D:1.10.375.10
SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836 GO:GO:0046788
GO:GO:0019061 InterPro:IPR014817 Pfam:PF08705
ProteinModelPortal:P05890 SMR:P05890 Uniprot:P05890
Length = 501
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 54 GHFARECPNVAICHNCGLPGHIASECTT--KALCWNCREPGHMAGNCPNEG 102
G+F R+ + C NCG GHIA C K CW C + GH +C NEG
Sbjct: 381 GNF-RDQRKIVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTNEG 430
>TAIR|locus:2049766 [details] [associations]
symbol:RS2Z33 "arginine/serine-rich zinc
knuckle-containing protein 33" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0000245 "spliceosomal
complex assembly" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0008380
"RNA splicing" evidence=NAS] [GO:0005829 "cytosol" evidence=RCA]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 SMART:SM00360 EMBL:CP002685 GO:GO:0000166
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
EMBL:AC005896 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
UniGene:At.48558 UniGene:At.71153 GO:GO:0000245 HSSP:P52298
HOGENOM:HOG000276234 KO:K12896 PIR:F84791 EMBL:AJ293801
EMBL:AY072315 EMBL:AY114563 EMBL:AK176551 EMBL:BX842463
EMBL:BX842467 EMBL:AK176666 IPI:IPI00543174 RefSeq:NP_850280.1
RefSeq:NP_973619.1 RefSeq:NP_973620.1 ProteinModelPortal:Q8VYA5
SMR:Q8VYA5 IntAct:Q8VYA5 STRING:Q8VYA5 PRIDE:Q8VYA5 ProMEX:Q8VYA5
EnsemblPlants:AT2G37340.1 GeneID:818311 KEGG:ath:AT2G37340
TAIR:At2g37340 InParanoid:Q8VYA5 OMA:NNGDDPS PhylomeDB:Q8VYA5
ProtClustDB:CLSN2680093 Genevestigator:Q8VYA5 Uniprot:Q8VYA5
Length = 290
Score = 110 (43.8 bits), Expect = 0.00040, P = 0.00040
Identities = 26/59 (44%), Positives = 30/59 (50%)
Query: 111 GHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT-ND--KACNNCRKTGHLARDCPNDP 166
G R D PP PG R C NC GH+A DCT D C C + GH+ R+C N P
Sbjct: 85 GSRDFDSRGPP--PGAGR-CFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSP 140
>TAIR|locus:2047092 [details] [associations]
symbol:GRP2B "glycine-rich protein 2B" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IEP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0009409 GO:GO:0008270 GO:GO:0003723 GO:GO:0009790
GO:GO:0010154 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
InterPro:IPR019844 EMBL:AC006264 eggNOG:COG1278
ProtClustDB:CLSN2683565 EMBL:U39072 EMBL:AY057693 EMBL:BT021142
IPI:IPI00516457 PIR:F84596 RefSeq:NP_179702.1 UniGene:At.1680
ProteinModelPortal:Q38896 SMR:Q38896 PaxDb:Q38896 PRIDE:Q38896
EnsemblPlants:AT2G21060.1 GeneID:816641 KEGG:ath:AT2G21060
TAIR:At2g21060 InParanoid:Q38896 OMA:CFKCGEP PhylomeDB:Q38896
Genevestigator:Q38896 GermOnline:AT2G21060 Uniprot:Q38896
Length = 201
Score = 106 (42.4 bits), Expect = 0.00047, P = 0.00047
Identities = 25/64 (39%), Positives = 31/64 (48%)
Query: 85 CWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCT 144
C+ C EPGHMA C G ++ G G R G L C +C + GHFA DCT
Sbjct: 138 CFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGLS-CYSCGESGHFARDCT 196
Query: 145 NDKA 148
+ A
Sbjct: 197 SGGA 200
>ZFIN|ZDB-GENE-080506-1 [details] [associations]
symbol:megf10 "multiple EGF-like-domains 10"
species:7955 "Danio rerio" [GO:0030239 "myofibril assembly"
evidence=IMP] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 ZFIN:ZDB-GENE-080506-1
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:CR396586
IPI:IPI00512925 Ensembl:ENSDART00000043936 Uniprot:E9QJQ6
Length = 1119
Score = 111 (44.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 31/121 (25%), Positives = 47/121 (38%)
Query: 47 CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKALCWN--CREP---GHMAGNCPNE 101
C++ PG ++C C N G+ H+ EC+ A W C +P G NC E
Sbjct: 218 CEDLCPPGKHGQQCEERCPCQNGGVCHHVTGECSCPA-GWGMVCGQPCPTGRFGKNCSQE 276
Query: 102 GICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNCRKTGHLARD 161
CH G C G+ R + C + G + C+ C N + H++
Sbjct: 277 CQCHNGGICSPSTGQCVCSSGYTGE-RCQDQC-QVGTYGIGCSQACRCVNGAQCYHVSGA 334
Query: 162 C 162
C
Sbjct: 335 C 335
Score = 45 (20.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 218 CQQLGHMSRDCMGPLMVCHNC--GGRGHLAYE-CPSGRF 253
C H + C C C G +G L E CPSG+F
Sbjct: 624 CPHCVHSNGPCHHVTGQCE-CLPGFKGALCNEVCPSGKF 661
>UNIPROTKB|P35962 [details] [associations]
symbol:gag "Gag polyprotein" species:362651 "Human
immunodeficiency virus type 1 (isolate YU2)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019061 "uncoating of virus"
evidence=TAS] [GO:0030260 "entry into host cell" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
InterPro:IPR000071 InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343 GO:GO:0005829
Reactome:REACT_116125 GO:GO:0005654 GO:GO:0030430 GO:GO:0046872
GO:GO:0005198 GO:GO:0008270 GO:GO:0003723 GO:GO:0010008
GO:GO:0020002 GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0030260 GO:GO:0042025 GO:GO:0019028 EMBL:M93258 GO:GO:0019076
Gene3D:1.10.1200.30 Gene3D:1.10.150.90 Gene3D:1.10.375.10
SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836 GO:GO:0046788
GO:GO:0019061 InterPro:IPR014817 Pfam:PF08705 PIR:A44001 PDB:1F6U
PDB:1MFS PDB:2R05 PDBsum:1F6U PDBsum:1MFS PDBsum:2R05
ProteinModelPortal:P35962 SMR:P35962 EvolutionaryTrace:P35962
Uniprot:P35962
Length = 500
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 47 CKNCKRPGHFARECPNVA--ICHNCGLP---GHIASECTTKALCWNCREPGHMAGNC--P 99
C+ PGH AR + ++ + G+ ++ T C+NC + GH+A NC P
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKT-VKCFNCGKEGHIAKNCRAP 408
Query: 100 NEGICHTCGKAGHRARDCT 118
+ C CGK GH+ +DCT
Sbjct: 409 RKKGCWKCGKEGHQMKDCT 427
>UNIPROTKB|F1M4B9 [details] [associations]
symbol:F1M4B9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 IPI:IPI00391685 Ensembl:ENSRNOT00000032465
Uniprot:F1M4B9
Length = 157
Score = 100 (40.3 bits), Expect = 0.00085, P = 0.00085
Identities = 44/155 (28%), Positives = 60/155 (38%)
Query: 50 CKRPGHFARECP-----NVAICHNCGLPGHIASECTTKALCWNCREPGHMAGNCP----- 99
C GH+ARECP I +CG+ + + + C E GH+A C
Sbjct: 9 CGWLGHWARECPIGDSRGYKI-RSCGIQRFQCVFSSLPGIYYFCGESGHLAKVCDLYFGK 67
Query: 100 -------NEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHFAADCTNDKACNNC 152
E C++CGK G A C D C+ C K G D T K C
Sbjct: 68 GGYIAKEQEQCCYSCGKGG--ASGCDHDH---SDEHFCS-CGKFGCIQRDFTKVKCCRG- 120
Query: 153 RKTGHLARDCPN-DPICNLC-NVSGHV---ARHCP 182
+T ++ DC + C + SG + ARH P
Sbjct: 121 EETDRISIDCSKASEVSYYCFSESGSLTQNARHSP 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.518 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 208 0.00077 112 3 12 22 0.43 32
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 94
No. of states in DFA: 571 (61 KB)
Total size of DFA: 159 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.57u 0.15s 15.72t Elapsed: 00:00:01
Total cpu time: 15.59u 0.15s 15.74t Elapsed: 00:00:01
Start: Sat May 11 05:12:06 2013 End: Sat May 11 05:12:07 2013