BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024874
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF29|SYP71_ARATH Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1
Length = 266
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/262 (81%), Positives = 235/262 (89%), Gaps = 2/262 (0%)
Query: 1 MSVIDILTRVDSICKKYDKYDVEKQRETNVSGDDAFARLYGAVEADIEAALQKAESASNE 60
M+VIDILTRVDSICKKYDKYDV+KQRE N+SGDDAFARLYGA E IE AL+KAE + E
Sbjct: 1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60
Query: 61 KNRASVVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELVARNDLVLALPDRIQAI 120
KNRA+ VA+NAEIRRTKARL EEVPKLQRLA+K+VKGL+TEEL ARNDLVLALP RI+AI
Sbjct: 61 KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120
Query: 121 PDGTAAAPKQSGGWGASA--SRTEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQ 178
PDGTA PK + W S+ SR +IKFDSDGRFDD+YFQ++ ESSQFRQEYEMRK+KQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180
Query: 179 GLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRS 238
GLDMISEGLD LKNMA DMNEE+DRQVPLMDEIDTKVDRAT+DLKNTNVRLK TV QLRS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240
Query: 239 SRNFCIDIVLLCIILGIAAYLY 260
SRNFCIDIVLLCI+LGIAAYLY
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLY 262
>sp|Q94KK6|SYP72_ARATH Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1
Length = 267
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 218/263 (82%), Gaps = 3/263 (1%)
Query: 1 MSVIDILTRVDSICKKYDKYDVEKQRETNVSGDDAFARLYGAVEADIEAALQKAESASNE 60
M VIDI+ RVD ICKKYDKYD++K RE SGDDAF+RL+ ++++DIEA L+KAE AS E
Sbjct: 1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60
Query: 61 KNRASVVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELVARNDLVLALPDRIQAI 120
KNRA+ VA+NAE+RRTKARL E+V KLQ+LA+KK+KGL+ EE +R DLV+AL DR+QAI
Sbjct: 61 KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120
Query: 121 PDGTAAAPKQSGG-WG-ASASRTEIKFD-SDGRFDDEYFQQTEESSQFRQEYEMRKMKQD 177
PDG KQ+ WG ASA IKFD S+ DD +FQQ+EESSQFRQEYEMR+ KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180
Query: 178 QGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLR 237
+GLD+ISEGLD LKN+A DMNEE+D+QVPLM+E++TKVD AT+DLKNTNVRLK + Q+R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240
Query: 238 SSRNFCIDIVLLCIILGIAAYLY 260
SSRNFCIDI+LLC+ILGI +Y+Y
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIY 263
>sp|Q94KK5|SYP73_ARATH Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1
Length = 263
Score = 335 bits (859), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/263 (68%), Positives = 216/263 (82%), Gaps = 7/263 (2%)
Query: 1 MSVIDILTRVDSICKKYDKYDVEKQRETNVSGDDAFARLYGAVEADIEAALQKAESASNE 60
M VID++TRVDSICKKY+KYD+ +QR+ NVSGDDAF+RLY AVE +E LQK E S+E
Sbjct: 1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60
Query: 61 KNRASVVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELVARNDLVLALPDRIQAI 120
N+A VA+NAEIRRTKARLLE +PKLQRL++KKVKGLS EEL ARNDLVL+L D+I+AI
Sbjct: 61 TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120
Query: 121 PDGTAAAPKQSGGWGASASRTEIKFD---SDGRFDDEYFQQTEESSQFRQEYEMRKMKQD 177
P+ +A GGW AS S + I+FD SD R EYFQ T ES QF+QEYEM+++KQ
Sbjct: 121 PESSAPV---VGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 177
Query: 178 QGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLR 237
+ LD I+EGLDTLKNMA D+NEE+DRQ PLMDEIDTK+D+A DLK+TNVRLK TVT+LR
Sbjct: 178 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 236
Query: 238 SSRNFCIDIVLLCIILGIAAYLY 260
SSRNFCIDI+LLCI+LGIAA++Y
Sbjct: 237 SSRNFCIDIILLCILLGIAAFIY 259
>sp|Q54IX6|STX8B_DICDI Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1
Length = 250
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 34 DAFARLYGAVEADIEAALQKAESASNEKNRASVVALN--AEIRRTKARLLEEVPKLQ-RL 90
D +L ++ ADI+ E + ++N +V N A++R + E+ +LQ L
Sbjct: 10 DNIVKLINSLTADIK------EYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSL 63
Query: 91 AIKKVKGLSTEELVARNDLV---LALPDRIQAIPDGTAAAPKQSGGWGASASRTEIKFDS 147
+ + +EL+ R + V +++ +++ + D Q + + I + S
Sbjct: 64 TYGNNRNIQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGY-S 122
Query: 148 DGRFDDEYFQQTEESSQF-------RQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEE 200
+ +F ++TE + QF Q++ MR+ QD+ LD++S+ + KNMAH M+ E
Sbjct: 123 NRQFGKP--KETEATKQFDNQQLFTNQQHIMRE--QDESLDLLSQSIMRQKNMAHAMSNE 178
Query: 201 VDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQ 235
+D+ ++D+++ D + L+N N R++ T+ Q
Sbjct: 179 LDQHNEMLDDVEIGTDAVSMRLRNANRRME-TIKQ 212
>sp|Q9LMG8|SNP30_ARATH Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana
GN=SNAP30 PE=3 SV=1
Length = 263
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 167 QEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTN 226
Q+ E K KQD GL +S+ L LK+MA DM E+D+Q +D + VD + ++ N
Sbjct: 195 QKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGAN 254
Query: 227 VRLKHTVTQ 235
R +H +++
Sbjct: 255 QRARHLLSK 263
>sp|Q9S7P9|SNP33_ARATH SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33
PE=1 SV=1
Length = 300
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 140 RTEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNE 199
R ++ +S R + ES+ Q EM K KQD GL +S+ L LKNMA DM
Sbjct: 205 REKLGLNSAPRGQSRTREPLPESADAYQRVEMEKAKQDDGLSDLSDILGELKNMAVDMGS 264
Query: 200 EVDRQVPLMDEIDTKVDRATADLKNTNVR 228
E+++Q +D + VD ++ +N R
Sbjct: 265 EIEKQNKGLDHLHDDVDELNFRVQQSNQR 293
>sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600
PE=2 SV=1
Length = 137
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 190 LKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFCIDIVLL 249
LKN+A ++ E Q +DE+ + RA A +KN N+R K ++ +RS N + +VL
Sbjct: 63 LKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKN-NIR-KLNMSIIRSGNNHIMHVVLF 120
Query: 250 CIILGIAAYLY 260
+++ Y++
Sbjct: 121 ALLVFFVLYIW 131
>sp|Q553P5|STX8A_DICDI Syntaxin-8A OS=Dictyostelium discoideum GN=syn8A PE=1 SV=1
Length = 152
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 168 EYEMRKMK-QDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTN 226
E + R M+ QD+ LD +S + +K+ A +N+ Q ++DE+D VD +A ++NT
Sbjct: 57 EKQKRDMEEQDKMLDALSGSISRVKDTAITINKTAQEQTDMLDELDVHVDSTSARMRNTT 116
Query: 227 VRLKHTVTQLRSSRNFCIDIVL 248
L T+TQ + +C I
Sbjct: 117 KNL-ITLTQQSKTTGYCSAICF 137
>sp|Q94KK7|SYP52_ARATH Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1
Length = 233
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 59 NEKNRASVVALNAE-----IRRTKARLLEEVPKLQRLAIKKVKG---LSTEELVARNDLV 110
+E+N + + +A+ IRR L + LQ L +K V G +S +E+ R D+V
Sbjct: 27 SERNASGLTGPDAQRRASAIRRKITILGTRLDSLQSLLVK-VPGKQHVSEKEMNRRKDMV 85
Query: 111 LALPDRIQAIPDGTAAAPKQSGGWGASASRTEIKFDSDGRFDDEYFQQTEESSQFRQEYE 170
L + + A+A S A+R + F +D + DD + + +Q ++
Sbjct: 86 GNLRSKTNQV----ASALNMSN----FANRDSL-FGTDLKPDDAINRVSGMDNQGIVVFQ 136
Query: 171 MRKMK-QDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRL 229
+ M+ QD+GL+ + E + + K++A +NEE+ Q L+D++D VD + L+ R+
Sbjct: 137 RQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLR----RV 192
Query: 230 KHTVTQL-RSSRNFCIDIVLLCIILGIAA 257
+ ++ + +S ++ C + +L +LGI
Sbjct: 193 QKSLALMNKSMKSGCSCMSMLLSVLGIVG 221
>sp|Q94CG2|BET12_ARATH Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4
Length = 130
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 176 QDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQ 235
D+ L+ + + + LK + D++EEV+ L+D++ K+D A + T R K V +
Sbjct: 39 NDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFK-LVFE 97
Query: 236 LRSSRNFCIDIVLLCIILGIAAYL 259
+S+R C I ++ I YL
Sbjct: 98 KKSNRKSCKLIAYFVLLFLIMYYL 121
>sp|Q9SA23|SYP51_ARATH Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1
Length = 232
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 148 DGRFDDEYFQQTEESSQFRQEYEMRKMK-QDQGLDMISEGLDTLKNMAHDMNEEVDRQVP 206
D + DD + T +Q Y+ + M+ QD+GL+ + + + K++A ++EE+D Q
Sbjct: 113 DIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTR 172
Query: 207 LMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFCIDIVLLCI-ILGIAAYLY 260
L+D++D VD + L+ L +RS + C+ ++L + I+G+A ++
Sbjct: 173 LIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCS-CMSMLLSVLGIVGLAVVIW 226
>sp|Q5R5K4|SNP29_PONAB Synaptosomal-associated protein 29 OS=Pongo abelii GN=SNAP29 PE=2
SV=1
Length = 258
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
K D LD +S GL LK++A M E++ Q ++D + TKVD+ ++K+T +++
Sbjct: 201 KIDSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQ 257
>sp|Q9Z2P6|SNP29_RAT Synaptosomal-associated protein 29 OS=Rattus norvegicus GN=Snap29
PE=1 SV=1
Length = 257
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
K D LD +S GL LK++A M E++ Q ++D + TKVD+ ++K+T +++
Sbjct: 200 KIDSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQ 256
>sp|Q9ERB0|SNP29_MOUSE Synaptosomal-associated protein 29 OS=Mus musculus GN=Snap29 PE=1
SV=1
Length = 260
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
K D LD +S GL LK++A M E++ Q ++D + TKVD+ ++K+T +++
Sbjct: 203 KIDSNLDELSVGLGHLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQ 259
>sp|O95721|SNP29_HUMAN Synaptosomal-associated protein 29 OS=Homo sapiens GN=SNAP29 PE=1
SV=1
Length = 258
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
K D LD +S GL LK++A M E++ Q ++D + TKVD+ ++K+T +++
Sbjct: 201 KIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQ 257
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 36.6 bits (83), Expect = 0.20, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 98/227 (43%), Gaps = 31/227 (13%)
Query: 8 TRVDSICKKYDKY--DVEKQRETNVSGDDAFARLYGAVEADIEAALQKAESASNEKNRAS 65
T + +I YD+ ++ +E S + L A I+AAL++A+ + N S
Sbjct: 2211 TTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQINGTS 2270
Query: 66 V-VALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELVARNDLVLALPDRIQAIPDGT 124
+ + N ++ +L EEV L + +K + +ND + D ++ + + +
Sbjct: 2271 IELTPNEQVLEKARKLYEEVNTL----VLPIKAQNKSLNALKND-IGEFSDHLEDLFNWS 2325
Query: 125 AAAPKQSGGWGASASRTEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQG----- 179
A+ +S A R + + FD+ F E Q+ + K +D G
Sbjct: 2326 EASQAKS----ADVERRNVA--NQKAFDNSKFDTVSE-----QKLQAEKNIKDAGNFLIN 2374
Query: 180 ----LDMISEGLDTLKNMAHDM---NEEVDRQVPLMDEIDTKVDRAT 219
L+ I++ LD L++ +++ N+ VD ++P+ ++ + D T
Sbjct: 2375 GDLTLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALT 2421
>sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1
Length = 245
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 97 GLSTEELVARNDLVLALPDRIQAIPDGTAAAPKQSGGWGASASRTEI----------KFD 146
G+ EL R +++ + G A SG AS R E+ ++D
Sbjct: 75 GIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYD 134
Query: 147 SDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEVDRQVP 206
G DD+ F Q+E Q + +QD+ LD +S+ + + + +++E+ Q
Sbjct: 135 QYGGRDDDGFVQSESDRQM-----LLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQER 189
Query: 207 LMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNF---CIDIVLLCIILGIAAYL 259
++DE+DT++D L+ ++ + + + C +VL IIL + +L
Sbjct: 190 IIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLF-IILFVLVFL 244
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 169 YEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVR 228
+E+ + + ++ L+ + + + LK ++ D+NEEVD ++D + +D + L T R
Sbjct: 31 HEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDR 90
Query: 229 LKHTVTQLRSSRNFCIDIVLLCIILGIAAYLY 260
K TV + +SSR + L+ +G+ +Y
Sbjct: 91 FK-TVFETKSSRRM---LTLVASFVGLFLVIY 118
>sp|Q9JKK1|STX6_MOUSE Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1
Length = 255
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 131 SGGWGASASRTEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMISEGLDTL 190
S W A + + D + + + +F + +++ Q ++ +QD+ L+++S + L
Sbjct: 129 SQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVL 183
Query: 191 KNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFC 243
KNM+ + E++ Q ++D+ +++ + L N +L R +C
Sbjct: 184 KNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|Q9SD96|SNP29_ARATH SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana GN=SNAP29
PE=2 SV=1
Length = 251
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
KQD+ L +S L LKNMA DM ++RQ +D + D +K +N R ++
Sbjct: 191 KQDEALTDLSALLGELKNMAVDMGTAIERQTNELDHLQDNADELNYRVKQSNQRARY 247
>sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1
Length = 249
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVT 234
+QDQ L+M+S + LK+M+ + EE+D Q ++D ++D + + +L
Sbjct: 162 EQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSH 221
Query: 235 QLRSSRNFC 243
R +C
Sbjct: 222 MTSDRRQWC 230
>sp|Q5ZL19|STX6_CHICK Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1
Length = 254
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 175 KQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVT 234
+QD+ L+++S + LKNM+ + E++ Q ++D+ ++D + L N +L
Sbjct: 167 QQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLAKVSH 226
Query: 235 QLRSSRNFC 243
R +C
Sbjct: 227 MTSDRRQWC 235
>sp|Q63635|STX6_RAT Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1
Length = 255
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 131 SGGWGASASRTEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMISEGLDTL 190
S W A + + D + + + +F + +++ Q ++ +QD+ L+++S + L
Sbjct: 129 SQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVL 183
Query: 191 KNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFC 243
KNM+ + E++ Q ++D+ +++ + L N +L R +C
Sbjct: 184 KNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|Q9YA91|METE_AERPE Probable methylcobalamin:homocysteine methyltransferase
OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 /
JCM 9820 / NBRC 100138 / K1) GN=metE PE=3 SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 154 EYFQQTEE---SSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDE 210
EY Q E + F++E E+ K + LD+I +G+ K + H E++R +P +
Sbjct: 178 EYIQVDEPALSTRPFKEEAELLK----EALDIIFKGVGA-KRIVHICYGELERILPYI-- 230
Query: 211 IDTKVDRATADLKNTNVRL 229
+D VD+ ++KN+N RL
Sbjct: 231 LDYPVDQFDLEMKNSNFRL 249
>sp|Q6P6S0|SNP47_RAT Synaptosomal-associated protein 47 OS=Rattus norvegicus GN=Snap47
PE=2 SV=1
Length = 419
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 158 QTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDR 217
Q + SQ ++++ + + Q L I L LK +A D E++RQ +D I VDR
Sbjct: 347 QEGQQSQLQKDWPLLSEGEAQELTQI---LSKLKGLALDTEAELERQDAALDGITVAVDR 403
Query: 218 ATADLKNTNVRLK 230
AT + N R++
Sbjct: 404 ATLTVDKHNRRMR 416
>sp|Q8L9S0|BETL2_ARATH Bet1-like protein At1g29060 OS=Arabidopsis thaliana GN=At1g29060
PE=2 SV=1
Length = 134
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 190 LKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFCIDIVLL 249
LKN+A ++ E Q +DE+ + RA A +KN N+R K ++ +RS N + +VL
Sbjct: 60 LKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKN-NIR-KLNLSIIRSGNNHIMHVVLF 117
Query: 250 CIILGIAAYLY 260
++L Y++
Sbjct: 118 ALLLFFILYMW 128
>sp|P83351|SNA29_CAEEL Soluable nsf attachment protein 29 OS=Caenorhabditis elegans
GN=snap-29 PE=3 SV=1
Length = 277
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 177 DQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDR 217
D+ LDM+S L L+ + D+ +EVD Q ++D I K +R
Sbjct: 186 DENLDMMSANLRNLQRLGADLGKEVDSQNEMLDRIQYKAER 226
>sp|Q61043|NIN_MOUSE Ninein OS=Mus musculus GN=Nin PE=2 SV=3
Length = 2035
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 6 ILTRVDSICKKYDKY--DVEKQRETNVSGDDAFARLYGAVEADIEAALQKAESASNEKNR 63
+L RVD + ++ +K D++K + + A+E E L+K +E+ +
Sbjct: 372 LLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKL----DEEYK 427
Query: 64 ASVVALNAEIRRTKARLLEEVPKLQRLAI-KKVKGLSTEELVARNDLVLALPD----RIQ 118
+ AL E+R+ + ++L++V K QR+ + ++++ TEE R+ L L+L + +
Sbjct: 428 ERIAALKNELRQEREQMLQQVGK-QRVELEQEIQKAKTEENYIRDRLALSLKENNRLETE 486
Query: 119 AIPDGTAAAPKQSGGWGASASRTEIKFDSDGRFDD---EYFQQTEESSQFRQEYEMR-KM 174
+ + A +S S + + G D E+F Q E +Q R EYE + ++
Sbjct: 487 LLENAEKLAEYESLTQKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRL 546
Query: 175 KQDQGLDMISE 185
QDQ ++ SE
Sbjct: 547 LQDQVDELQSE 557
>sp|Q8R570|SNP47_MOUSE Synaptosomal-associated protein 47 OS=Mus musculus GN=Snap47 PE=1
SV=1
Length = 413
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 170 EMRKMKQDQGLDMISEG--------LDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATAD 221
E +++ + L + SEG L +K +A D E++RQ +D I VDRAT +
Sbjct: 342 EGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGITVAVDRATLN 401
Query: 222 LKNTNVRLK 230
+ N R++
Sbjct: 402 VDKQNRRMR 410
>sp|Q0II86|SNP29_BOVIN Synaptosomal-associated protein 29 OS=Bos taurus GN=SNAP29 PE=2
SV=1
Length = 258
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 177 DQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKH 231
D LD +S GL LK++A + E+D Q ++D + +KVD+ + +T +++
Sbjct: 203 DSNLDELSVGLGRLKDIALGIQTEIDEQDDILDRLTSKVDKLDVSITSTERKVRQ 257
>sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana
GN=At5g49945 PE=1 SV=1
Length = 480
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 206 PLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFCIDIVLLCIILGIA 256
PL+ E T D T DLK ++ T Q + +++ ++I +C ++ +A
Sbjct: 117 PLITENGTHADPKTPDLKTSSEAQGDTNDQTKKKKSYAVEIACVCFLIALA 167
>sp|Q5R6Q2|STX6_PONAB Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1
Length = 255
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 146 DSDGRFDDEYFQQTEESSQFRQEYEMRKM----KQDQGLDMISEGLDTLKNMAHDMNEEV 201
D GR D E +S F +E + ++ +QD+ L+++S + LKNM+ + E+
Sbjct: 138 DKYGRLDREL---QRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGEL 194
Query: 202 DRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFC 243
+ Q ++++ +++ + L N +L R +C
Sbjct: 195 EEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1
Length = 255
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 146 DSDGRFDDEYFQQTEESSQFRQEYEMRKM----KQDQGLDMISEGLDTLKNMAHDMNEEV 201
D GR D E +S F +E + ++ +QD+ L+++S + LKNM+ + E+
Sbjct: 138 DKYGRLDREL---QRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGEL 194
Query: 202 DRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQLRSSRNFC 243
+ Q ++++ +++ + L N +L R +C
Sbjct: 195 EEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|A6QP11|SNP47_BOVIN Synaptosomal-associated protein 47 OS=Bos taurus GN=SNAP47 PE=1
SV=1
Length = 420
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 187 LDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLK 230
L LK +A D E++RQ +D I VDRAT + N R+K
Sbjct: 374 LRKLKGLALDTETELERQDEALDGITEAVDRATLTIDKHNRRMK 417
>sp|Q9P6P1|TLG2_SCHPO t-SNARE affecting a late Golgi compartment protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg2 PE=3 SV=1
Length = 301
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 72 EIRRTKARLLEEVPKLQRL-AIKKVKGLS---TEELVARNDLVLALPDRIQAIPDGTAAA 127
EI+R ++ ++ + Q+L + K + S +E L+A+N L L RIQ +
Sbjct: 100 EIQRLTIQITQDFQRCQKLLQVTKAQTNSATGSEALMAKNFLS-NLASRIQT--ESAQFR 156
Query: 128 PKQSG------GWGASASRTEIKFD---SDGRFDDEYFQQT---EESSQFRQEYEMRKMK 175
KQS G A+ S E K D SD QQ EE + Q ++
Sbjct: 157 KKQSTYLKKLRGLNANISPVESKLDETVSDVAISQSTIQQVALMEEQGEDEQ-----AIR 211
Query: 176 QDQGLDMISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDRATADLKNTNVRLKHTVTQ 235
++ + I+EG+ L M D+ V Q L+D ID +++ K+ L +
Sbjct: 212 HERAVAKIAEGIIELAQMFQDLQVLVIEQGALVDRIDFNIEQTQVHAKSAEKELIKAESH 271
Query: 236 LRSS---RNFCIDIVLLCIILGIAA 257
+++ R C I+L+ ++ I A
Sbjct: 272 QKNTGRLRFICFLILLIVALIVILA 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,565,504
Number of Sequences: 539616
Number of extensions: 3301555
Number of successful extensions: 15805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 15586
Number of HSP's gapped (non-prelim): 360
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)