Query 024876
Match_columns 261
No_of_seqs 267 out of 2155
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:57:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if4_A ATFKBP42; FKBP-like, al 100.0 3.5E-42 1.2E-46 305.4 20.4 258 1-261 1-258 (338)
2 2f4e_A ATFKBP42; FKBP-like, al 100.0 4.5E-34 1.5E-38 231.3 17.2 179 1-182 1-179 (180)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 3.2E-32 1.1E-36 250.6 18.7 206 50-261 29-345 (457)
4 1p5q_A FKBP52, FK506-binding p 100.0 8.3E-29 2.8E-33 219.1 22.9 199 49-261 22-224 (336)
5 1yat_A FK506 binding protein; 99.9 3.2E-26 1.1E-30 171.8 14.4 111 48-162 2-113 (113)
6 3kz7_A FK506-binding protein 3 99.9 3.9E-26 1.3E-30 172.8 14.1 110 50-162 2-119 (119)
7 3o5e_A Peptidyl-prolyl CIS-tra 99.9 4.4E-26 1.5E-30 178.1 13.7 110 50-163 33-143 (144)
8 1jvw_A Macrophage infectivity 99.9 3E-26 1E-30 182.8 12.8 124 46-180 31-155 (167)
9 2lkn_A AH receptor-interacting 99.9 4.4E-27 1.5E-31 186.3 7.8 118 48-166 6-161 (165)
10 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.6E-25 5.5E-30 172.5 14.9 112 46-161 22-133 (133)
11 3o5q_A Peptidyl-prolyl CIS-tra 99.9 6.9E-26 2.4E-30 173.6 12.7 110 50-163 17-127 (128)
12 3b7x_A FK506-binding protein 6 99.9 2.9E-26 9.9E-31 177.0 9.8 110 50-162 24-133 (134)
13 2jwx_A FKBP38NTD, FK506-bindin 99.9 4.1E-25 1.4E-29 174.4 16.4 118 41-166 31-152 (157)
14 4dip_A Peptidyl-prolyl CIS-tra 99.9 1.3E-25 4.5E-30 171.4 12.9 115 46-164 6-124 (125)
15 2ppn_A FK506-binding protein 1 99.9 1.9E-25 6.4E-30 165.9 12.5 106 53-162 1-107 (107)
16 2awg_A 38 kDa FK-506 binding p 99.9 3.7E-25 1.3E-29 167.2 13.8 112 43-162 3-117 (118)
17 2lgo_A FKBP; infectious diseas 99.9 2.9E-25 9.9E-30 170.5 12.8 111 47-161 17-130 (130)
18 1r9h_A FKB-6, FK506 binding pr 99.9 3.7E-25 1.3E-29 171.0 12.6 111 50-164 12-123 (135)
19 3oe2_A Peptidyl-prolyl CIS-tra 99.9 4.8E-25 1.7E-29 182.3 13.6 108 46-162 111-218 (219)
20 2vn1_A 70 kDa peptidylprolyl i 99.9 1.1E-24 3.7E-29 167.2 13.9 117 45-164 8-128 (129)
21 2d9f_A FK506-binding protein 8 99.9 3.6E-25 1.2E-29 171.1 10.8 118 41-166 5-126 (135)
22 1fd9_A Protein (macrophage inf 99.9 7.4E-25 2.5E-29 181.1 13.3 112 46-163 100-211 (213)
23 3uf8_A Ubiquitin-like protein 99.9 1.2E-24 4E-29 179.9 14.2 112 46-161 98-209 (209)
24 1u79_A FKBP-type peptidyl-prol 99.9 7.1E-25 2.4E-29 168.2 9.8 115 45-161 5-128 (129)
25 1q6h_A FKBP-type peptidyl-prol 99.9 3.2E-24 1.1E-28 178.5 14.1 110 46-162 115-224 (224)
26 1q1c_A FK506-binding protein 4 99.9 3.1E-22 1E-26 172.6 15.0 111 50-164 49-160 (280)
27 2pbc_A FK506-binding protein 2 99.9 2.9E-22 9.8E-27 147.4 11.1 98 64-165 3-100 (102)
28 3jxv_A 70 kDa peptidyl-prolyl 99.9 3.1E-23 1E-27 185.0 -0.3 118 45-166 4-122 (356)
29 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 7.1E-20 2.4E-24 168.2 21.3 186 51-261 145-379 (457)
30 3jxv_A 70 kDa peptidyl-prolyl 99.8 6.2E-21 2.1E-25 170.1 13.5 111 51-163 243-355 (356)
31 1q1c_A FK506-binding protein 4 99.8 5.8E-20 2E-24 158.3 13.7 110 50-172 166-280 (280)
32 4dt4_A FKBP-type 16 kDa peptid 99.7 2.7E-17 9.1E-22 130.8 8.0 72 66-139 24-95 (169)
33 1hxv_A Trigger factor; FKBP fo 99.7 7E-17 2.4E-21 120.5 8.1 87 64-162 27-113 (113)
34 3pr9_A FKBP-type peptidyl-prol 99.7 9.8E-17 3.3E-21 126.2 8.4 70 67-139 2-84 (157)
35 2kr7_A FKBP-type peptidyl-prol 99.6 1E-15 3.4E-20 120.0 10.4 72 66-139 6-77 (151)
36 1ix5_A FKBP; ppiase, isomerase 99.6 2.5E-16 8.4E-21 123.5 6.9 73 66-140 1-86 (151)
37 3prb_A FKBP-type peptidyl-prol 99.6 6.1E-16 2.1E-20 128.7 9.0 97 67-166 2-153 (231)
38 2kfw_A FKBP-type peptidyl-prol 99.6 2E-15 7E-20 122.8 11.7 70 67-139 3-72 (196)
39 2k8i_A SLYD, peptidyl-prolyl C 99.6 3E-15 1E-19 119.4 12.0 70 67-139 3-72 (171)
40 3cgm_A SLYD, peptidyl-prolyl C 99.5 1.7E-14 5.9E-19 113.6 8.2 65 67-139 3-67 (158)
41 1w26_A Trigger factor, TF; cha 99.4 3.8E-12 1.3E-16 115.8 12.8 90 64-165 155-244 (432)
42 1t11_A Trigger factor, TF; hel 99.2 6.3E-12 2.1E-16 113.0 3.9 88 66-165 160-247 (392)
43 3rkv_A Putative peptidylprolyl 99.2 5.5E-11 1.9E-15 92.7 6.9 87 175-261 4-91 (162)
44 4gcn_A Protein STI-1; structur 98.9 1.4E-09 4.7E-14 81.8 5.9 66 179-261 5-70 (127)
45 2hr2_A Hypothetical protein; a 98.9 2.9E-09 9.8E-14 83.6 7.4 79 178-261 7-85 (159)
46 2fbn_A 70 kDa peptidylprolyl i 98.8 1.2E-08 4.2E-13 81.8 9.3 105 152-260 11-115 (198)
47 4gco_A Protein STI-1; structur 98.8 5.4E-09 1.9E-13 78.5 5.9 64 180-260 11-74 (126)
48 1ihg_A Cyclophilin 40; ppiase 98.6 5E-08 1.7E-12 86.8 6.5 87 174-261 215-301 (370)
49 3upv_A Heat shock protein STI1 98.3 8.4E-07 2.9E-11 65.4 6.4 63 181-260 3-65 (126)
50 2l6j_A TPR repeat-containing p 98.3 8.5E-07 2.9E-11 63.3 6.2 63 182-261 4-66 (111)
51 3sz7_A HSC70 cochaperone (SGT) 98.1 6.1E-06 2.1E-10 63.7 6.4 65 179-260 8-72 (164)
52 3gty_X Trigger factor, TF; cha 98.1 6.7E-06 2.3E-10 74.6 7.3 76 66-165 154-229 (433)
53 3gyz_A Chaperone protein IPGC; 97.9 1.7E-05 6E-10 61.3 6.0 78 183-260 37-131 (151)
54 2kc7_A BFR218_protein; tetratr 97.9 3.3E-05 1.1E-09 54.0 6.8 58 186-260 4-62 (99)
55 3gyz_A Chaperone protein IPGC; 97.9 2.4E-05 8.3E-10 60.4 6.4 63 188-260 35-97 (151)
56 3ma5_A Tetratricopeptide repea 97.9 3.3E-05 1.1E-09 54.8 6.7 60 184-260 9-68 (100)
57 2v5f_A Prolyl 4-hydroxylase su 97.9 4E-05 1.4E-09 55.1 7.1 66 185-260 8-73 (104)
58 3q49_B STIP1 homology and U bo 97.9 2.5E-05 8.7E-10 57.7 6.2 32 182-213 9-40 (137)
59 2c2l_A CHIP, carboxy terminus 97.8 2.6E-05 8.7E-10 66.2 6.5 63 182-261 4-66 (281)
60 2dba_A Smooth muscle cell asso 97.8 3.8E-05 1.3E-09 57.1 6.2 66 181-260 27-92 (148)
61 4gco_A Protein STI-1; structur 97.8 3.9E-05 1.3E-09 57.0 6.1 61 184-261 49-109 (126)
62 3k9i_A BH0479 protein; putativ 97.8 6.3E-05 2.2E-09 54.6 6.7 61 183-260 28-88 (117)
63 4ga2_A E3 SUMO-protein ligase 97.7 4.7E-05 1.6E-09 58.2 6.0 59 185-260 34-92 (150)
64 1a17_A Serine/threonine protei 97.7 7E-05 2.4E-09 56.8 6.8 39 175-213 6-44 (166)
65 1elw_A TPR1-domain of HOP; HOP 97.7 7.1E-05 2.4E-09 52.9 6.1 78 183-260 5-99 (118)
66 4gcn_A Protein STI-1; structur 97.7 9.2E-05 3.1E-09 54.9 6.9 67 184-260 44-110 (127)
67 1na3_A Designed protein CTPR2; 97.7 0.00011 3.7E-09 50.0 6.7 61 183-260 10-70 (91)
68 2hr2_A Hypothetical protein; a 97.7 6.1E-05 2.1E-09 58.9 5.9 72 184-261 59-130 (159)
69 3vtx_A MAMA; tetratricopeptide 97.7 6.3E-05 2.1E-09 58.6 6.1 60 185-261 110-169 (184)
70 2vgx_A Chaperone SYCD; alterna 97.7 8.8E-05 3E-09 56.6 6.4 77 184-260 23-116 (148)
71 1elr_A TPR2A-domain of HOP; HO 97.6 0.00011 3.7E-09 53.0 6.4 62 182-260 4-65 (131)
72 2kck_A TPR repeat; tetratricop 97.6 0.00012 4.1E-09 51.3 6.2 27 234-260 77-104 (112)
73 3upv_A Heat shock protein STI1 97.6 0.00012 4.1E-09 53.5 6.1 61 183-260 39-99 (126)
74 2xcb_A PCRH, regulatory protei 97.6 0.00013 4.4E-09 54.9 6.4 77 184-260 20-113 (142)
75 3vtx_A MAMA; tetratricopeptide 97.6 0.00015 5E-09 56.5 6.8 60 184-260 7-66 (184)
76 1hxi_A PEX5, peroxisome target 97.6 0.00014 4.7E-09 53.5 6.1 78 183-260 18-112 (121)
77 2vgx_A Chaperone SYCD; alterna 97.5 0.00015 5.3E-09 55.2 6.1 29 185-213 58-86 (148)
78 3u3w_A Transcriptional activat 97.5 0.00012 4.1E-09 62.0 5.9 68 183-260 156-223 (293)
79 3sz7_A HSC70 cochaperone (SGT) 97.5 0.00016 5.5E-09 55.5 6.1 60 184-260 47-106 (164)
80 3fp2_A TPR repeat-containing p 97.5 7.7E-05 2.6E-09 67.7 4.9 74 170-260 13-86 (537)
81 3rkv_A Putative peptidylprolyl 97.5 0.00022 7.7E-09 54.5 6.8 62 182-260 63-124 (162)
82 2xcb_A PCRH, regulatory protei 97.5 0.00024 8.2E-09 53.3 6.7 29 185-213 55-83 (142)
83 2lni_A Stress-induced-phosphop 97.5 8.3E-05 2.8E-09 54.0 3.9 79 182-260 16-111 (133)
84 2vyi_A SGTA protein; chaperone 97.5 0.0003 1E-08 50.5 6.7 82 179-260 9-107 (131)
85 2gw1_A Mitochondrial precursor 97.5 0.00014 4.9E-09 65.3 6.0 65 178-260 2-66 (514)
86 2kat_A Uncharacterized protein 97.4 0.00031 1E-08 50.5 6.7 60 184-260 21-80 (115)
87 4i17_A Hypothetical protein; T 97.4 0.00023 7.9E-09 57.4 6.5 31 183-213 8-38 (228)
88 2xev_A YBGF; tetratricopeptide 97.4 0.00023 8E-09 51.7 6.0 28 233-260 76-103 (129)
89 1wao_1 Serine/threonine protei 97.4 0.00013 4.6E-09 66.7 5.3 33 180-212 4-36 (477)
90 1hxi_A PEX5, peroxisome target 97.4 0.00033 1.1E-08 51.4 6.1 29 185-213 54-82 (121)
91 2qfc_A PLCR protein; TPR, HTH, 97.4 0.00027 9.3E-09 59.7 6.3 69 182-260 155-223 (293)
92 3urz_A Uncharacterized protein 97.3 0.00033 1.1E-08 56.3 6.1 57 187-260 59-115 (208)
93 3q49_B STIP1 homology and U bo 97.3 0.00051 1.8E-08 50.4 6.7 60 184-260 45-104 (137)
94 3ro3_A PINS homolog, G-protein 97.3 0.00053 1.8E-08 50.9 6.5 66 184-260 51-116 (164)
95 3ro3_A PINS homolog, G-protein 97.3 0.00048 1.7E-08 51.1 6.3 70 180-260 7-76 (164)
96 2xev_A YBGF; tetratricopeptide 97.3 0.00052 1.8E-08 49.8 6.1 63 184-260 4-66 (129)
97 2kck_A TPR repeat; tetratricop 97.2 0.00037 1.3E-08 48.7 5.0 61 183-260 7-67 (112)
98 4gyw_A UDP-N-acetylglucosamine 97.2 0.00033 1.1E-08 67.6 5.9 79 182-260 9-104 (723)
99 1hh8_A P67PHOX, NCF-2, neutrop 97.2 0.00069 2.4E-08 53.7 6.7 60 184-260 39-98 (213)
100 4g1t_A Interferon-induced prot 97.2 0.00034 1.2E-08 62.6 5.3 68 185-260 54-121 (472)
101 3qky_A Outer membrane assembly 97.2 0.00035 1.2E-08 57.7 5.0 65 182-260 15-79 (261)
102 1elw_A TPR1-domain of HOP; HOP 97.2 0.001 3.6E-08 46.6 6.9 29 185-213 41-69 (118)
103 3uq3_A Heat shock protein STI1 97.2 0.0005 1.7E-08 55.6 5.8 62 181-260 4-65 (258)
104 2lni_A Stress-induced-phosphop 97.2 0.00097 3.3E-08 48.1 6.6 28 185-212 53-80 (133)
105 2ifu_A Gamma-SNAP; membrane fu 97.1 0.0007 2.4E-08 57.7 6.5 67 182-260 116-182 (307)
106 3ffl_A Anaphase-promoting comp 97.1 0.00055 1.9E-08 53.5 4.9 75 183-257 64-146 (167)
107 4i17_A Hypothetical protein; T 97.1 0.0016 5.3E-08 52.4 7.9 67 185-261 79-145 (228)
108 3urz_A Uncharacterized protein 97.1 0.00054 1.8E-08 55.0 5.0 78 183-261 5-82 (208)
109 1p5q_A FKBP52, FK506-binding p 97.1 0.00064 2.2E-08 59.1 5.7 62 182-260 196-257 (336)
110 2yhc_A BAMD, UPF0169 lipoprote 97.1 0.00075 2.6E-08 54.7 5.8 63 184-260 6-68 (225)
111 3qww_A SET and MYND domain-con 97.1 0.00051 1.8E-08 62.2 5.2 72 181-261 339-410 (433)
112 1qqe_A Vesicular transport pro 97.1 0.00081 2.8E-08 56.9 6.1 69 181-260 36-104 (292)
113 1elr_A TPR2A-domain of HOP; HO 97.1 0.0013 4.3E-08 47.2 6.3 66 185-260 41-106 (131)
114 4ga2_A E3 SUMO-protein ligase 97.0 0.00053 1.8E-08 52.2 4.4 57 188-261 3-59 (150)
115 2fbn_A 70 kDa peptidylprolyl i 97.0 0.0012 4.3E-08 52.0 6.7 62 182-260 88-149 (198)
116 3n71_A Histone lysine methyltr 97.0 0.0011 3.7E-08 61.1 7.1 77 176-261 303-379 (490)
117 2dba_A Smooth muscle cell asso 97.0 0.0016 5.5E-08 47.9 6.8 61 183-260 66-126 (148)
118 2if4_A ATFKBP42; FKBP-like, al 97.0 0.00081 2.8E-08 58.5 5.8 61 184-261 232-292 (338)
119 1qqe_A Vesicular transport pro 97.0 0.00092 3.2E-08 56.6 5.9 68 182-260 117-185 (292)
120 3ulq_A Response regulator aspa 97.0 0.001 3.5E-08 58.1 6.3 68 182-260 184-251 (383)
121 3u3w_A Transcriptional activat 97.0 0.00097 3.3E-08 56.3 5.9 68 182-260 196-264 (293)
122 3u4t_A TPR repeat-containing p 97.0 0.0014 4.8E-08 53.7 6.7 28 185-212 6-33 (272)
123 2pl2_A Hypothetical conserved 97.0 0.0012 4E-08 53.3 5.9 60 184-260 7-66 (217)
124 1hh8_A P67PHOX, NCF-2, neutrop 96.9 0.0017 5.9E-08 51.3 6.8 77 184-261 73-149 (213)
125 3gw4_A Uncharacterized protein 96.9 0.0018 6.3E-08 50.5 6.8 68 182-260 26-93 (203)
126 3q15_A PSP28, response regulat 96.9 0.0014 4.8E-08 57.2 6.6 69 181-260 181-249 (378)
127 2pl2_A Hypothetical conserved 96.9 0.0014 4.7E-08 52.9 6.1 57 186-260 122-178 (217)
128 1a17_A Serine/threonine protei 96.9 0.0021 7.1E-08 48.3 6.7 59 185-260 50-108 (166)
129 1na0_A Designed protein CTPR3; 96.9 0.0024 8.3E-08 45.1 6.7 77 184-260 11-104 (125)
130 3n71_A Histone lysine methyltr 96.9 0.00094 3.2E-08 61.5 5.2 72 181-261 350-421 (490)
131 2vyi_A SGTA protein; chaperone 96.9 0.0027 9.2E-08 45.3 6.7 28 185-212 49-76 (131)
132 3ulq_A Response regulator aspa 96.9 0.0018 6E-08 56.6 6.7 62 188-260 109-170 (383)
133 3q15_A PSP28, response regulat 96.8 0.0018 6.2E-08 56.6 6.7 65 185-260 104-168 (378)
134 1ihg_A Cyclophilin 40; ppiase 96.8 0.0013 4.3E-08 58.2 5.6 60 184-260 275-334 (370)
135 3qwp_A SET and MYND domain-con 96.8 0.0012 4.2E-08 59.6 5.3 72 181-261 328-399 (429)
136 2qfc_A PLCR protein; TPR, HTH, 96.8 0.0012 4E-08 55.8 4.9 66 184-260 198-264 (293)
137 3uq3_A Heat shock protein STI1 96.8 0.002 6.8E-08 52.0 6.1 60 184-260 141-200 (258)
138 1zu2_A Mitochondrial import re 96.8 0.0012 4.1E-08 51.4 4.4 61 184-261 38-119 (158)
139 3qww_A SET and MYND domain-con 96.8 0.0024 8.1E-08 57.8 7.0 72 181-261 297-368 (433)
140 4gyw_A UDP-N-acetylglucosamine 96.8 0.0017 5.6E-08 62.7 6.1 78 184-261 45-139 (723)
141 3ieg_A DNAJ homolog subfamily 96.7 0.0023 7.8E-08 54.1 6.2 29 184-212 5-33 (359)
142 1na0_A Designed protein CTPR3; 96.7 0.0042 1.4E-07 43.8 6.7 28 185-212 46-73 (125)
143 3gw4_A Uncharacterized protein 96.7 0.0037 1.3E-07 48.7 7.0 66 184-260 109-174 (203)
144 3qky_A Outer membrane assembly 96.7 0.0034 1.2E-07 51.6 7.0 76 185-260 92-175 (261)
145 2ifu_A Gamma-SNAP; membrane fu 96.7 0.0029 9.9E-08 53.8 6.6 68 182-260 155-222 (307)
146 4a1s_A PINS, partner of inscut 96.7 0.0032 1.1E-07 55.0 6.9 33 180-212 46-78 (411)
147 3ro2_A PINS homolog, G-protein 96.7 0.0034 1.2E-07 52.3 6.7 29 184-212 7-35 (338)
148 3edt_B KLC 2, kinesin light ch 96.7 0.0025 8.7E-08 51.9 5.8 70 182-260 43-112 (283)
149 3k9i_A BH0479 protein; putativ 96.7 0.00094 3.2E-08 48.2 2.8 53 194-260 2-54 (117)
150 3u4t_A TPR repeat-containing p 96.6 0.004 1.4E-07 50.9 6.9 59 186-261 78-136 (272)
151 2r5s_A Uncharacterized protein 96.6 0.0018 6.1E-08 50.2 4.4 60 184-260 8-67 (176)
152 3edt_B KLC 2, kinesin light ch 96.6 0.0021 7.2E-08 52.4 4.9 70 182-260 85-154 (283)
153 1xnf_A Lipoprotein NLPI; TPR, 96.5 0.0035 1.2E-07 51.2 5.9 77 184-260 45-138 (275)
154 2c2l_A CHIP, carboxy terminus 96.5 0.0029 1E-07 53.3 5.5 60 184-260 40-99 (281)
155 3qwp_A SET and MYND domain-con 96.5 0.004 1.4E-07 56.2 6.6 69 184-261 289-357 (429)
156 3ieg_A DNAJ homolog subfamily 96.5 0.005 1.7E-07 52.0 6.7 28 186-213 238-265 (359)
157 4eqf_A PEX5-related protein; a 96.5 0.0048 1.7E-07 53.0 6.6 78 183-260 66-160 (365)
158 1wao_1 Serine/threonine protei 96.5 0.0036 1.2E-07 57.1 6.0 61 183-260 41-101 (477)
159 3sf4_A G-protein-signaling mod 96.4 0.0054 1.9E-07 52.9 6.7 29 184-212 11-39 (406)
160 2yhc_A BAMD, UPF0169 lipoprote 96.4 0.0078 2.7E-07 48.5 7.1 61 186-260 151-211 (225)
161 1xnf_A Lipoprotein NLPI; TPR, 96.4 0.005 1.7E-07 50.2 6.0 77 184-260 79-171 (275)
162 2h6f_A Protein farnesyltransfe 96.3 0.0045 1.5E-07 55.0 5.8 78 183-260 98-193 (382)
163 2y4t_A DNAJ homolog subfamily 96.3 0.007 2.4E-07 53.3 7.0 28 186-213 261-288 (450)
164 3nf1_A KLC 1, kinesin light ch 96.3 0.0047 1.6E-07 51.2 5.4 72 180-260 25-96 (311)
165 4abn_A Tetratricopeptide repea 96.3 0.0038 1.3E-07 56.7 5.2 63 182-261 102-165 (474)
166 2h6f_A Protein farnesyltransfe 96.3 0.0029 1E-07 56.2 4.3 78 184-261 133-228 (382)
167 2y4t_A DNAJ homolog subfamily 96.3 0.0053 1.8E-07 54.2 5.9 80 181-260 25-121 (450)
168 3hym_B Cell division cycle pro 96.3 0.0079 2.7E-07 50.3 6.7 61 184-261 238-298 (330)
169 3as5_A MAMA; tetratricopeptide 96.2 0.008 2.7E-07 45.5 6.0 27 234-260 145-171 (186)
170 1fch_A Peroxisomal targeting s 96.2 0.0071 2.4E-07 51.7 6.3 30 183-212 65-94 (368)
171 3nf1_A KLC 1, kinesin light ch 96.2 0.0071 2.4E-07 50.1 6.1 68 184-260 155-222 (311)
172 4eqf_A PEX5-related protein; a 96.2 0.0071 2.4E-07 51.9 6.2 28 185-212 216-243 (365)
173 4b4t_Q 26S proteasome regulato 96.2 0.007 2.4E-07 53.2 6.2 76 185-260 7-82 (434)
174 3sf4_A G-protein-signaling mod 96.2 0.0086 2.9E-07 51.6 6.6 66 184-260 189-254 (406)
175 2fo7_A Synthetic consensus TPR 96.2 0.011 3.8E-07 41.9 6.3 27 234-260 70-96 (136)
176 2fo7_A Synthetic consensus TPR 96.2 0.012 4.2E-07 41.7 6.4 75 186-260 39-130 (136)
177 2e2e_A Formate-dependent nitri 96.2 0.0089 3E-07 45.9 6.0 77 184-260 46-142 (177)
178 2vq2_A PILW, putative fimbrial 96.2 0.01 3.5E-07 46.6 6.4 27 234-260 77-104 (225)
179 4a1s_A PINS, partner of inscut 96.1 0.0095 3.2E-07 51.9 6.6 66 184-260 88-153 (411)
180 2e2e_A Formate-dependent nitri 96.1 0.0079 2.7E-07 46.2 5.4 28 185-212 81-111 (177)
181 3as5_A MAMA; tetratricopeptide 96.1 0.015 5.2E-07 43.9 6.8 27 234-260 111-137 (186)
182 2ho1_A Type 4 fimbrial biogene 96.0 0.014 4.7E-07 47.1 6.8 27 186-212 75-101 (252)
183 3mkr_A Coatomer subunit epsilo 96.0 0.012 3.9E-07 49.9 6.5 28 233-260 200-227 (291)
184 1fch_A Peroxisomal targeting s 96.0 0.012 4.3E-07 50.1 6.7 76 185-260 220-312 (368)
185 3ro2_A PINS homolog, G-protein 96.0 0.011 3.8E-07 49.1 6.2 68 182-260 43-110 (338)
186 2vsy_A XCC0866; transferase, g 96.0 0.0091 3.1E-07 55.2 6.0 78 183-260 24-118 (568)
187 2vq2_A PILW, putative fimbrial 96.0 0.014 4.8E-07 45.7 6.4 76 185-260 45-140 (225)
188 4abn_A Tetratricopeptide repea 96.0 0.011 3.6E-07 53.8 6.3 62 185-260 216-285 (474)
189 3qou_A Protein YBBN; thioredox 95.9 0.012 4.1E-07 49.6 6.2 60 184-260 119-178 (287)
190 2q7f_A YRRB protein; TPR, prot 95.9 0.016 5.3E-07 46.2 6.7 56 187-259 96-151 (243)
191 2q7f_A YRRB protein; TPR, prot 95.9 0.013 4.3E-07 46.8 6.1 61 183-260 58-118 (243)
192 2pzi_A Probable serine/threoni 95.9 0.01 3.5E-07 56.6 6.3 59 185-260 436-494 (681)
193 2vsy_A XCC0866; transferase, g 95.7 0.013 4.5E-07 54.1 6.1 76 185-260 60-155 (568)
194 2ho1_A Type 4 fimbrial biogene 95.7 0.022 7.5E-07 45.9 6.8 27 234-260 176-202 (252)
195 3cv0_A Peroxisome targeting si 95.7 0.02 7E-07 47.6 6.7 77 184-260 174-267 (327)
196 3cv0_A Peroxisome targeting si 95.7 0.023 7.9E-07 47.3 6.8 79 182-260 21-116 (327)
197 3hym_B Cell division cycle pro 95.5 0.028 9.5E-07 46.8 6.9 76 185-260 128-220 (330)
198 1w3b_A UDP-N-acetylglucosamine 95.5 0.016 5.5E-07 50.2 5.3 77 184-260 69-162 (388)
199 1w3b_A UDP-N-acetylglucosamine 95.4 0.028 9.7E-07 48.6 6.5 25 187-211 242-266 (388)
200 1pc2_A Mitochondria fission pr 95.1 0.037 1.3E-06 42.6 5.6 29 233-261 71-99 (152)
201 2pzi_A Probable serine/threoni 95.1 0.0091 3.1E-07 56.9 2.6 76 185-261 470-562 (681)
202 2gw1_A Mitochondrial precursor 95.0 0.046 1.6E-06 48.7 6.8 60 184-260 41-100 (514)
203 2r5s_A Uncharacterized protein 94.9 0.032 1.1E-06 42.9 4.9 61 185-260 111-171 (176)
204 1hz4_A MALT regulatory protein 94.9 0.057 1.9E-06 46.4 7.0 66 184-260 55-120 (373)
205 4b4t_Q 26S proteasome regulato 94.7 0.048 1.6E-06 47.8 6.2 66 184-260 137-202 (434)
206 1zu2_A Mitochondrial import re 94.7 0.031 1.1E-06 43.3 4.2 51 194-261 14-74 (158)
207 2v6y_A AAA family ATPase, P60 94.6 0.033 1.1E-06 38.3 3.8 37 178-214 7-43 (83)
208 2l6j_A TPR repeat-containing p 94.6 0.017 5.9E-07 40.1 2.4 62 184-256 40-101 (111)
209 2kat_A Uncharacterized protein 94.6 0.058 2E-06 38.1 5.3 44 200-260 3-46 (115)
210 3fp2_A TPR repeat-containing p 94.4 0.06 2E-06 48.4 6.3 55 189-260 425-489 (537)
211 1ouv_A Conserved hypothetical 94.4 0.058 2E-06 44.2 5.6 76 185-260 9-105 (273)
212 2xpi_A Anaphase-promoting comp 94.3 0.062 2.1E-06 49.1 6.1 61 183-260 517-577 (597)
213 1hz4_A MALT regulatory protein 94.2 0.071 2.4E-06 45.8 6.1 67 185-260 96-162 (373)
214 1ouv_A Conserved hypothetical 93.7 0.08 2.7E-06 43.4 5.2 76 185-260 41-141 (273)
215 2cpt_A SKD1 protein, vacuolar 93.7 0.083 2.8E-06 38.7 4.6 44 171-214 6-50 (117)
216 1b89_A Protein (clathrin heavy 93.7 0.033 1.1E-06 50.4 2.9 51 184-259 124-174 (449)
217 3bee_A Putative YFRE protein; 93.3 0.21 7.2E-06 34.6 6.1 59 186-261 10-71 (93)
218 1nzn_A CGI-135 protein, fissio 93.2 0.079 2.7E-06 39.3 3.8 30 232-261 73-102 (126)
219 2xpi_A Anaphase-promoting comp 92.8 0.19 6.4E-06 45.9 6.6 24 188-211 379-402 (597)
220 4g1t_A Interferon-induced prot 92.6 0.19 6.6E-06 44.3 6.3 62 185-260 337-399 (472)
221 1klx_A Cysteine rich protein B 92.6 0.19 6.5E-06 37.2 5.3 55 187-260 62-124 (138)
222 3qou_A Protein YBBN; thioredox 92.5 0.16 5.5E-06 42.5 5.3 76 185-260 154-246 (287)
223 3mkr_A Coatomer subunit epsilo 92.5 0.2 6.8E-06 42.1 5.9 56 188-260 206-262 (291)
224 2w2u_A Hypothetical P60 katani 92.5 0.096 3.3E-06 35.9 3.2 43 172-214 8-51 (83)
225 2ond_A Cleavage stimulation fa 92.4 0.26 8.7E-06 41.4 6.5 57 187-260 104-161 (308)
226 3rjv_A Putative SEL1 repeat pr 92.3 0.12 4.1E-06 41.1 4.2 80 182-261 18-117 (212)
227 1na3_A Designed protein CTPR2; 92.3 0.21 7.2E-06 32.8 4.8 46 185-247 46-91 (91)
228 4a5x_A MITD1, MIT domain-conta 91.8 0.2 6.7E-06 34.6 4.1 34 181-214 15-48 (86)
229 1xi4_A Clathrin heavy chain; a 91.2 0.24 8.3E-06 51.0 5.6 52 184-260 1197-1248(1630)
230 4f3v_A ESX-1 secretion system 91.0 0.29 9.9E-06 41.5 5.3 27 185-211 138-164 (282)
231 2v6x_A Vacuolar protein sortin 90.9 0.23 7.9E-06 34.0 3.8 38 177-214 8-45 (85)
232 3ffl_A Anaphase-promoting comp 90.3 0.84 2.9E-05 35.4 6.8 69 184-260 22-90 (167)
233 4gns_B Protein CSD3, chitin bi 90.0 0.48 1.6E-05 45.7 6.3 55 186-257 341-395 (754)
234 1wfd_A Hypothetical protein 15 89.9 0.4 1.4E-05 33.5 4.3 64 178-242 11-74 (93)
235 3ma5_A Tetratricopeptide repea 89.6 0.23 7.8E-06 34.3 2.9 28 233-260 7-34 (100)
236 1klx_A Cysteine rich protein B 89.6 0.5 1.7E-05 34.8 5.0 54 188-260 31-88 (138)
237 4f3v_A ESX-1 secretion system 89.2 0.58 2E-05 39.6 5.7 62 185-260 174-235 (282)
238 2ond_A Cleavage stimulation fa 89.0 0.67 2.3E-05 38.8 6.0 27 234-260 204-230 (308)
239 3rjv_A Putative SEL1 repeat pr 89.0 0.47 1.6E-05 37.5 4.8 28 233-260 125-156 (212)
240 3o48_A Mitochondria fission 1 87.7 0.46 1.6E-05 35.5 3.5 30 232-261 77-106 (134)
241 1y8m_A FIS1; mitochondria, unk 86.9 0.35 1.2E-05 36.6 2.5 29 233-261 77-105 (144)
242 2xm6_A Protein corresponding t 86.4 0.81 2.8E-05 41.0 5.2 28 233-260 399-430 (490)
243 4b4t_R RPN7, 26S proteasome re 86.3 0.65 2.2E-05 41.6 4.4 63 183-259 132-194 (429)
244 3e4b_A ALGK; tetratricopeptide 83.6 0.47 1.6E-05 42.5 2.2 73 187-260 8-101 (452)
245 2dl1_A Spartin; SPG20, MIT, st 83.6 3.5 0.00012 29.8 6.4 58 194-251 34-96 (116)
246 3bee_A Putative YFRE protein; 83.2 0.73 2.5E-05 31.8 2.6 30 184-213 45-74 (93)
247 1xi4_A Clathrin heavy chain; a 82.9 0.99 3.4E-05 46.6 4.4 25 235-259 1136-1160(1630)
248 2vkj_A TM1634; membrane protei 81.9 3.2 0.00011 28.5 5.2 34 180-213 51-84 (106)
249 2crb_A Nuclear receptor bindin 81.0 1.2 4E-05 30.9 2.9 36 179-214 12-47 (97)
250 2ooe_A Cleavage stimulation fa 81.0 2 6.9E-05 38.8 5.5 23 189-211 328-350 (530)
251 2kc7_A BFR218_protein; tetratr 80.5 2.1 7E-05 28.5 4.2 30 184-213 37-66 (99)
252 1dce_A Protein (RAB geranylger 80.2 2.4 8.3E-05 39.3 5.8 15 198-212 89-103 (567)
253 2xm6_A Protein corresponding t 79.9 2.1 7.2E-05 38.2 5.2 23 188-210 81-107 (490)
254 2ff4_A Probable regulatory pro 79.3 7 0.00024 34.2 8.3 77 184-260 117-198 (388)
255 2ooe_A Cleavage stimulation fa 77.8 2.9 0.0001 37.7 5.5 28 233-260 425-452 (530)
256 3htx_A HEN1; HEN1, small RNA m 77.6 2.9 9.9E-05 40.9 5.5 64 66-130 560-650 (950)
257 1b89_A Protein (clathrin heavy 76.7 8.7 0.0003 34.6 8.1 84 177-261 143-235 (449)
258 3mkq_A Coatomer beta'-subunit; 76.2 4 0.00014 38.5 6.1 74 186-259 685-762 (814)
259 3txn_A 26S proteasome regulato 75.9 6.3 0.00022 34.8 6.9 63 187-260 104-166 (394)
260 2v5f_A Prolyl 4-hydroxylase su 74.8 4.8 0.00016 27.7 4.8 30 184-213 48-77 (104)
261 3mv2_B Coatomer subunit epsilo 72.0 7.3 0.00025 33.2 6.1 57 187-258 105-161 (310)
262 3eab_A Spastin; spastin, MIT, 71.6 3.4 0.00012 28.4 3.2 52 196-247 33-86 (89)
263 1dce_A Protein (RAB geranylger 70.5 7.9 0.00027 35.8 6.5 52 193-261 39-101 (567)
264 2ymb_A MITD1, MIT domain-conta 69.6 0.95 3.2E-05 37.6 0.0 67 175-242 16-82 (257)
265 3e4b_A ALGK; tetratricopeptide 69.0 7.7 0.00026 34.4 5.9 76 185-260 179-278 (452)
266 2o8p_A 14-3-3 domain containin 67.0 7.8 0.00027 31.5 4.9 59 193-260 136-195 (227)
267 2wb7_A PT26-6P; extra chromoso 66.2 6.8 0.00023 35.5 4.8 42 175-216 422-466 (526)
268 3mv2_B Coatomer subunit epsilo 65.7 7.3 0.00025 33.2 4.8 46 197-260 193-238 (310)
269 3dra_A Protein farnesyltransfe 65.5 8.5 0.00029 32.6 5.2 45 199-260 50-96 (306)
270 2npm_A 14-3-3 domain containin 64.2 14 0.00046 30.7 6.0 52 199-260 173-225 (260)
271 2br9_A 14-3-3E, 14-3-3 protein 63.7 11 0.00037 30.8 5.2 53 199-260 147-200 (234)
272 3uzd_A 14-3-3 protein gamma; s 63.2 8.9 0.0003 31.6 4.6 53 199-260 148-201 (248)
273 3dra_A Protein farnesyltransfe 62.9 9.8 0.00034 32.2 5.1 58 186-260 71-137 (306)
274 3ubw_A 14-3-3E, 14-3-3 protein 61.5 9.9 0.00034 31.5 4.6 53 199-260 173-226 (261)
275 3efz_A 14-3-3 protein; 14-3-3, 61.0 9.7 0.00033 31.7 4.5 54 198-260 168-224 (268)
276 3ly7_A Transcriptional activat 60.5 18 0.00061 31.7 6.4 55 188-260 283-337 (372)
277 1o9d_A 14-3-3-like protein C; 60.3 13 0.00045 30.8 5.2 53 199-260 152-205 (260)
278 2zan_A Vacuolar protein sortin 59.8 1.9 6.4E-05 38.7 0.0 38 177-214 6-43 (444)
279 3iqu_A 14-3-3 protein sigma; s 58.8 11 0.00037 30.9 4.4 54 198-260 149-203 (236)
280 3q7a_A Farnesyltransferase alp 57.0 20 0.00067 31.0 6.0 28 234-261 124-153 (349)
281 3ax2_A Mitochondrial import re 56.4 10 0.00035 25.0 3.2 40 175-214 10-49 (73)
282 3mkr_B Coatomer subunit alpha; 54.7 25 0.00084 30.1 6.1 59 186-246 106-164 (320)
283 3kae_A CDC27, possible protein 53.1 21 0.00073 27.9 4.9 24 237-260 66-89 (242)
284 3mv2_A Coatomer subunit alpha; 52.7 24 0.00082 30.2 5.7 59 186-246 118-176 (325)
285 1om2_A Protein (mitochondrial 51.1 23 0.0008 24.5 4.4 41 174-214 12-52 (95)
286 3dss_A Geranylgeranyl transfer 47.8 34 0.0012 29.3 6.0 46 198-260 90-137 (331)
287 3q7a_A Farnesyltransferase alp 45.1 29 0.00099 30.0 5.2 48 196-260 68-116 (349)
288 3dss_A Geranylgeranyl transfer 40.5 30 0.001 29.6 4.5 50 194-260 41-101 (331)
289 2f23_A Anti-cleavage anti-GREA 39.5 42 0.0014 25.2 4.8 23 109-131 122-144 (156)
290 3u64_A Protein TP_0956; tetrat 38.6 44 0.0015 28.2 5.1 59 186-260 203-267 (301)
291 3bmb_A Regulator of nucleoside 37.1 64 0.0022 23.6 5.3 24 108-131 90-113 (136)
292 2p4v_A Transcription elongatio 36.9 74 0.0025 23.9 5.8 24 108-131 120-143 (158)
293 3jys_A SUSD superfamily protei 34.8 51 0.0018 29.7 5.4 33 227-260 189-221 (499)
294 4b4t_P 26S proteasome regulato 33.8 1.1E+02 0.0039 26.9 7.4 63 186-259 141-203 (445)
295 2jpu_A ORF C02003 protein; sol 32.5 26 0.00089 25.7 2.4 34 179-212 4-37 (129)
296 3re2_A Predicted protein; meni 32.2 83 0.0028 27.6 5.8 26 188-213 302-327 (472)
297 2pn0_A Prokaryotic transcripti 32.1 50 0.0017 24.4 4.0 24 108-131 93-116 (141)
298 2oo2_A Hypothetical protein AF 31.9 40 0.0014 22.8 3.1 40 175-214 28-67 (86)
299 2pmr_A Uncharacterized protein 31.8 42 0.0014 22.7 3.2 39 175-213 32-70 (87)
300 1grj_A GREA protein; transcrip 31.7 51 0.0018 24.8 4.1 24 108-131 122-145 (158)
301 3mkq_B Coatomer subunit alpha; 31.3 80 0.0027 24.4 5.2 29 182-210 34-62 (177)
302 1pc2_A Mitochondria fission pr 30.0 51 0.0017 24.8 3.8 28 184-211 73-100 (152)
303 2rpa_A Katanin P60 ATPase-cont 28.5 33 0.0011 22.7 2.2 38 173-214 7-44 (78)
304 2ijq_A Hypothetical protein; s 28.3 1.7E+02 0.0059 22.1 6.5 66 186-260 36-102 (161)
305 3u84_A Menin; MLL, JUND, ledgf 28.3 1E+02 0.0035 27.5 5.8 26 188-213 324-349 (550)
306 1nzn_A CGI-135 protein, fissio 27.8 63 0.0022 23.4 3.8 27 185-211 77-103 (126)
307 3ckc_A SUSD; TPR repeat, carbo 26.8 89 0.003 28.0 5.6 33 228-261 199-231 (527)
308 2xze_A STAM-binding protein; h 21.8 1E+02 0.0035 22.9 4.1 42 172-213 30-71 (146)
309 3myv_A SUSD superfamily protei 21.7 1.3E+02 0.0043 26.6 5.4 27 234-260 191-217 (454)
310 2lj4_A Peptidyl-prolyl CIS-tra 21.6 44 0.0015 23.7 1.9 20 107-126 81-100 (115)
311 4gq4_A Menin; tumor suppressor 20.8 1.7E+02 0.0057 26.1 5.7 26 189-214 310-335 (489)
312 3kez_A Putative sugar binding 20.3 1.4E+02 0.0048 26.4 5.4 27 234-260 197-223 (461)
No 1
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-42 Score=305.38 Aligned_cols=258 Identities=78% Similarity=1.247 Sum_probs=201.4
Q ss_pred CCccCCCCCCCCCCCCCCccccccccccccCCCCCCCCCCCCCCcceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEE
Q 024876 1 MEEVDGEPKSQAPGEVGESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAW 80 (261)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~ 80 (261)
|+|+++-+. ...+++++...+.++.+.+.|..+...||++..++.++++||.|+|+++|.|..|..||.|+|||+++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~ 77 (338)
T 2if4_A 1 MDESLEHQT---QTHDQESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAW 77 (338)
T ss_dssp -------------------------------------CCCCCCCSCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEE
T ss_pred Chhhhhhhc---cccCccchhhhhhhccCCCCCCcccCCCCCCCcCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEE
Confidence 667766655 55666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEee
Q 024876 81 AESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIG 160 (261)
Q Consensus 81 ~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~ 160 (261)
+.++|++|++++..+.|++|++|.+..+|+||+.+|.+|++||++.|+||+.++||..+...++.||++++++|.|+|++
T Consensus 78 ~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~ 157 (338)
T 2if4_A 78 TKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIG 157 (338)
T ss_dssp ETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEE
T ss_pred EcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEE
Confidence 98769999999877789999999863599999999999999999999999999999988644478999999999999999
Q ss_pred cccCccccccCCCchhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHH
Q 024876 161 FDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMA 240 (261)
Q Consensus 161 v~~~~~~~e~~~l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A 240 (261)
+....+....|.++.++++..+..++..|+.+|+.|+|..|+..|++|+.+...........+..+....++..+|+|+|
T Consensus 158 ~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla 237 (338)
T 2if4_A 158 FDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIA 237 (338)
T ss_dssp EECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHH
Confidence 99888777789999999999999999999999999999999999999999875432222233444566777788999999
Q ss_pred HHHHHhhCHHHHHHHHHhhcC
Q 024876 241 ACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 241 ~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.||+++++|.+|+.+|++||+
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999873
No 2
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=100.00 E-value=4.5e-34 Score=231.28 Aligned_cols=179 Identities=75% Similarity=1.182 Sum_probs=121.1
Q ss_pred CCccCCCCCCCCCCCCCCccccccccccccCCCCCCCCCCCCCCcceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEE
Q 024876 1 MEEVDGEPKSQAPGEVGESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAW 80 (261)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~ 80 (261)
|+|+++. +....++++++..++++...+.|.+...+|++...++.++++|++|+++++|+|..|..||.|+|||+++
T Consensus 1 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~ 77 (180)
T 2f4e_A 1 MDESLEH---QTQTHDQESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAW 77 (180)
T ss_dssp ------------------------------------CCSCCCCCSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEE
T ss_pred ChhHhhh---hhccCCccchhhhhhccccccCCCCcccCCcccCCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEE
Confidence 5666655 3477888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEee
Q 024876 81 AESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIG 160 (261)
Q Consensus 81 ~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~ 160 (261)
+.++|++|++++..+.|+.|.+|.+..+++||+.+|.+|++|++++|+||+.++||..+...++.||++++|+|+|+|++
T Consensus 78 l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~ 157 (180)
T 2f4e_A 78 TKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIG 157 (180)
T ss_dssp ETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEE
T ss_pred ECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEE
Confidence 98669999999888889999999752489999999999999999999999999999988532367999999999999999
Q ss_pred cccCccccccCCCchhhHhhhh
Q 024876 161 FDETKEGKARSDMTVEERIGAA 182 (261)
Q Consensus 161 v~~~~~~~e~~~l~~ee~~~~a 182 (261)
|....+.+..|.|+.+|++..|
T Consensus 158 v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 158 FDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp ESCBCCC---------------
T ss_pred EecCccccccccCCHHHHHhhc
Confidence 9988866668999999999876
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=3.2e-32 Score=250.60 Aligned_cols=206 Identities=29% Similarity=0.473 Sum_probs=155.3
Q ss_pred eCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
+++||.|+|+++|+|.. |..||.|+|||++++.+ |++|++|+..+.|+.|++|.+ .+|+||+.+|.+|++||++.|+
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~-g~~~dss~~~~~p~~~~~g~~-~~i~g~~~~l~~m~~Ge~~~~~ 106 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKRGEICHLL 106 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC------CBC------CEEEETTST-TSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECC-CCEEeccCCCCCCeEEEeCCc-chhhHHHHHHhhCCCCCEEEEE
Confidence 57999999999999995 99999999999999865 899999988788999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccCc----------------------cc-------------------
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETK----------------------EG------------------- 167 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~~----------------------~~------------------- 167 (261)
|||.++||..|. ++.||++++++|+|+|++|.... .+
T Consensus 107 i~~~~~yg~~g~--~~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~ 184 (457)
T 1kt0_A 107 CKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCR 184 (457)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred EChHHhccccCC--CCCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCCeEEecC
Confidence 999999999887 57899999999999999876420 00
Q ss_pred ---------------------------------------------------------------------cccCCCchhhH
Q 024876 168 ---------------------------------------------------------------------KARSDMTVEER 178 (261)
Q Consensus 168 ---------------------------------------------------------------------~e~~~l~~ee~ 178 (261)
...|.+..+.+
T Consensus 185 ~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~ 264 (457)
T 1kt0_A 185 DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEK 264 (457)
T ss_dssp EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHH
T ss_pred ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHH
Confidence 00011222334
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
...+..++..|+.+|+.|+|..|+..|++|+.+...... ..++...++..++..+|+|+|.||+++++|++|+.+|++
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~--~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYG--LSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccc--CChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 456667888999999999999999999999998765422 234556678888999999999999999999999999999
Q ss_pred hcC
Q 024876 259 VSK 261 (261)
Q Consensus 259 aL~ 261 (261)
||+
T Consensus 343 al~ 345 (457)
T 1kt0_A 343 ALG 345 (457)
T ss_dssp HHH
T ss_pred HHh
Confidence 973
No 4
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.97 E-value=8.3e-29 Score=219.10 Aligned_cols=199 Identities=26% Similarity=0.420 Sum_probs=177.5
Q ss_pred EeCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccc---hhHHHHHHhhcCCCCcE
Q 024876 49 VLHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKK---EMTGLAIGVSSMKAGEH 124 (261)
Q Consensus 49 ~~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~---~i~gle~~l~~Mk~Ge~ 124 (261)
..++||.|+|+++|.|. +|..|+.|+|||++++ + |++||++ |+.|.+|.| . ++++|+.+|..|++||+
T Consensus 22 ~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~-g~~fd~~-----~~~f~lG~g-~~~~~~~~~e~al~~~~~Ge~ 93 (336)
T 1p5q_A 22 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQR-----ELRFEIGEG-ENLDLPYGLERAIQRMEKGEH 93 (336)
T ss_dssp CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T-TEEEEEE-----EEEEETTCG-GGGTCCHHHHHHHTTCCTTCE
T ss_pred cCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C-CEEEecC-----CeEEEeCCC-CccccchHHHHHHhcCCCCCe
Confidence 44789999999999999 8999999999999998 4 8999987 899999988 5 58999999999999999
Q ss_pred EEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccCccccccCCCchhhHhhhhcccchhhHHhhhhhhHHHHHHH
Q 024876 125 ALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQ 204 (261)
Q Consensus 125 ~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~~~~~e~~~l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~ 204 (261)
+.|.|+|.++||..|.. ...||+++++.|++.|.++..... .+.+..+.....+..++..|+.+|+.|+|..|+..
T Consensus 94 ~~l~i~p~~ayg~~g~~-~~~i~~~~~l~f~~~L~~~~~A~~---~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~ 169 (336)
T 1p5q_A 94 SIVYLKPSYAFGSVGKE-KFQIPPNAELKYELHLKSFEKAKE---SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQ 169 (336)
T ss_dssp EEEEECTTTTTTTTCBG-GGTBCSSCCEEEEEEEEEEECCCC---GGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred EEEEECCccccCcCCCC-ccCCCCCCeEEEEEEEeecccccc---hhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 99999999999999862 126999999999999999998876 78888888888999999999999999999999999
Q ss_pred HHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 205 YEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 205 Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
|++|+.+...... ...+...++..+...+++|+|.|++++++|.+|+..|++||+
T Consensus 170 y~~Al~~~p~~~~--~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 170 YKKIVSWLEYESS--FSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHTTTCCC--CCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccc--CChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999998765422 223455677888899999999999999999999999999873
No 5
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.94 E-value=3.2e-26 Score=171.80 Aligned_cols=111 Identities=26% Similarity=0.453 Sum_probs=103.2
Q ss_pred eEeCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEE
Q 024876 48 EVLHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHAL 126 (261)
Q Consensus 48 ~~~~~gi~k~vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~ 126 (261)
+++++|++|+++++|+|.. |..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++|+++.
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~e~~l~gm~~Ge~~~ 79 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN-GQKFDSSVDRGSPFQCNIGVG-QVIKGWDVGIPKLSVGEKAR 79 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT-SCEEEESTTTTCCEEEETTSS-SSCHHHHHHGGGCCTTCEEE
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECC-CCEEEecCCCCCcEEEEeCCC-CccHHHHHHHhCCCCCCEEE
Confidence 4678999999999999996 99999999999999865 899999987778999999999 89999999999999999999
Q ss_pred EEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 127 LHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 127 ~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
|.|||.++||..+. ++.||+|++|+|+|+|++|+
T Consensus 80 v~ip~~~ayG~~~~--~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 80 LTIPGPYAYGPRGF--PGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHCcCCCCC--CCCcCCCCeEEEEEEEEEeC
Confidence 99999999999886 46799999999999999874
No 6
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.94 E-value=3.9e-26 Score=172.83 Aligned_cols=110 Identities=29% Similarity=0.412 Sum_probs=100.5
Q ss_pred eCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCC-------CcCcEEecCCccchhHHHHHHhhcCCC
Q 024876 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLE-------QQPLEMVLGKEKKEMTGLAIGVSSMKA 121 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~-------~~~~~~~lG~~~~~i~gle~~l~~Mk~ 121 (261)
+|+|++|+|+++|+|. .|..||.|+|||++++.+ |++|++++.. +.|+.|.+|.+ .+++||+.+|.+|++
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~~~~~~~~p~~f~lG~~-~~i~G~e~~l~gm~~ 79 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPD-GTVFDTNIQTSSKKKKNAKPLSFKVGVG-KVIRGWDEALLTMSK 79 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTT-SCEEEECCCCSSSTTTTCCCEEEETTSS-SSCHHHHHHHTTCCT
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECC-CCEEEeccccccccccCCCCEEEEECCC-ChhHHHHHHHhCCCC
Confidence 5799999999999997 799999999999999876 8999999753 47999999999 899999999999999
Q ss_pred CcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 122 GEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 122 Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
|+++.|.|||.++||..+.. ...|||+++|+|+|+|++|.
T Consensus 80 Ge~~~v~ip~~~aYG~~g~~-~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 80 GEKARLEIEPEWAYGKKGQP-DAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp TCEEEEEECGGGTTCTTCBG-GGTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECcHHhcCCCCCC-CCccCcCCeEEEEEEEEEeC
Confidence 99999999999999999862 12799999999999999874
No 7
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.94 E-value=4.4e-26 Score=178.07 Aligned_cols=110 Identities=30% Similarity=0.526 Sum_probs=103.5
Q ss_pred eCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
.++||+|+++++|+|. .|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+|+||+.+|.+|++||+++|+
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~~i~G~e~~l~gm~~Ge~~~v~ 110 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKKGEICHLL 110 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTT-SCEEEESGGGTSCEEEETTSS-SSCHHHHHHHTTCCBTCEEEEE
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECC-CCEEEeecccCCCeEEEeCCC-cccHHHHHHHhCCCCCCEEEEE
Confidence 3699999999999998 899999999999999876 899999988888999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~ 163 (261)
|||.++||..+. ++.|||+++|+|+|+|++|+.
T Consensus 111 ipp~~aYG~~g~--~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 111 CKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred EChHHCcCCCCC--CCCcCCCCeEEEEEEEEEecC
Confidence 999999999987 578999999999999999863
No 8
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.94 E-value=3e-26 Score=182.75 Aligned_cols=124 Identities=23% Similarity=0.371 Sum_probs=110.6
Q ss_pred ceeEeCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEH 124 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~ 124 (261)
.+.++++|++|+++++|+|.. |..||.|+|||++++.+ |++|++++..+.|++|.+| .+|+||+.+|.+|++|++
T Consensus 31 ~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~d-G~~fdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Ge~ 106 (167)
T 1jvw_A 31 DAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD-GTVFDSSRERGKPTTFRPN---EVIKGWTEALQLMREGDR 106 (167)
T ss_dssp TEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT-SCEEEEHHHHTSCEEECGG---GSCHHHHHHHTTCCTTCE
T ss_pred CcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECC-CCEEeeccccCCCEEEEeC---chhHHHHHHHcCCCCCCE
Confidence 467889999999999999996 99999999999999876 8999999876789999995 799999999999999999
Q ss_pred EEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccCccccccCCCchhhHhh
Q 024876 125 ALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIG 180 (261)
Q Consensus 125 ~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~~~~~e~~~l~~ee~~~ 180 (261)
++|.|||.++||..+. ++.||||++|+|+|+|++|.+. .|.++.++..+
T Consensus 107 ~~~~Ip~~laYG~~g~--~~~Ipp~s~LiF~VeL~~i~~~-----~~~~~~~e~~~ 155 (167)
T 1jvw_A 107 WRLFIPYDLAYGVTGG--GGMIPPYSPLEFDVELISIKDG-----GKGRTAEEVDE 155 (167)
T ss_dssp EEEEECGGGTTTTTCS--SSSSCTTCCEEEEEEEEEEGGG-----CCSCBHHHHHH
T ss_pred EEEEECchhhCCCCCC--CCCcCCCCeEEEEEEEEEEEcC-----CCCCCHHHHHH
Confidence 9999999999999986 4689999999999999999864 45566665443
No 9
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.94 E-value=4.4e-27 Score=186.32 Aligned_cols=118 Identities=19% Similarity=0.321 Sum_probs=100.4
Q ss_pred eEeCCcEEEEEEecCCCCCC--CCCCEEEEEEEEEEeC-CCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcE
Q 024876 48 EVLHEKVTKQIIKEGHGQKP--SKYSTCFLHYRAWAES-TRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEH 124 (261)
Q Consensus 48 ~~~~~gi~k~vl~~G~G~~p--~~g~~V~v~y~~~~~~-~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~ 124 (261)
.++++||+|+||++|+|..| ..|+.|+|||++++.+ +|++||||+.++.|++|.+|.+ .+|+||+.+|.+|++||+
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g-~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKK-FKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSS-CSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCC-CccHHHHHHHhcCccCce
Confidence 46789999999999999844 5799999999999864 5899999999999999999999 899999999999999999
Q ss_pred EEEEEeCCCCcCC-----------CCCCCCC------------------------CCCCCCceEEEEEEeecccCcc
Q 024876 125 ALLHVGWELGYGK-----------EGSFSFP------------------------NVSPMADLVYEVVLIGFDETKE 166 (261)
Q Consensus 125 ~~~~i~~~~~yg~-----------~g~~~~~------------------------~ip~~~~l~~~iel~~v~~~~~ 166 (261)
++|+|||+++||. .+...+. .|+++++|+|+|||++|+.+.+
T Consensus 85 ~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 85 AQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 9999999999982 0110000 0334578999999999998875
No 10
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.93 E-value=1.6e-25 Score=172.50 Aligned_cols=112 Identities=30% Similarity=0.479 Sum_probs=104.2
Q ss_pred ceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~ 125 (261)
.+..+++|++|+++++|+|..|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+++|.+|++||++
T Consensus 22 ~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~eeaL~gmk~Ge~~ 99 (133)
T 2y78_A 22 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD-GQKFDSSKDRNDPFAFVLGGG-MVIKGWDEGVQGMKVGGVR 99 (133)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETT-SCEEEETTTTTCCEEEETTSS-SSCHHHHHHSTTCBTTCEE
T ss_pred CcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCEEeccCcCCCCEEEEeCCC-ChhHHHHHHHcCCCCCCEE
Confidence 35678999999999999999999999999999999865 899999987778999999999 8999999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeec
Q 024876 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v 161 (261)
+|.||+.++||..+. ++.|||+++|+|+|+|++|
T Consensus 100 ~v~ip~~~aYG~~~~--~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 100 RLTIPPQLGYGARGA--GGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred EEEECcHHhCCCCCC--CCCCCCCCeEEEEEEEEEC
Confidence 999999999999886 4579999999999999975
No 11
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.93 E-value=6.9e-26 Score=173.61 Aligned_cols=110 Identities=30% Similarity=0.526 Sum_probs=103.2
Q ss_pred eCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
.++|++|+++++|+|. .|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++|++++|.
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~~i~G~e~~l~gm~~Ge~~~v~ 94 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKKGEICHLL 94 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEECCC-CccHHHHHHHhcCCCCCEEEEE
Confidence 5699999999999998 799999999999999976 899999987778999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~ 163 (261)
|||.++||..+. ++.|||+++|+|+|+|++|+.
T Consensus 95 ip~~~aYG~~g~--~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 95 CKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred EChHHcCCCCCC--CCCcCCCCEEEEEEEEEEecC
Confidence 999999999987 478999999999999999863
No 12
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=177.02 Aligned_cols=110 Identities=26% Similarity=0.495 Sum_probs=96.0
Q ss_pred eCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHV 129 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i 129 (261)
+++||+|+++++|+|..+..||.|+|||++++.++|++|++++..+.|+.|.+|.+ .+++||+.+|.+|++||++.|+|
T Consensus 24 ~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g-~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 24 GDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGED-ITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CC-CCCHHHHHHHHTCEETCEEEEEE
T ss_pred CCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCc-chhHHHHHHHhCCCCCCEEEEEE
Confidence 57999999999999998889999999999998755899999987778999999999 89999999999999999999999
Q ss_pred eCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 130 GWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 130 ~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
||.++||..+. ++.||||++|+|+|+|++|.
T Consensus 103 p~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 103 KPNYAYGTLGC--PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCC--CCCcCcCCeEEEEEEEEEEe
Confidence 99999999886 46799999999999999985
No 13
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.93 E-value=4.1e-25 Score=174.39 Aligned_cols=118 Identities=23% Similarity=0.369 Sum_probs=107.4
Q ss_pred CCCCcceeEeCCcE-EEEEEecCCCC--CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhh
Q 024876 41 PKVDSEVEVLHEKV-TKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVS 117 (261)
Q Consensus 41 ~~~~~~~~~~~~gi-~k~vl~~G~G~--~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~ 117 (261)
+...+|..++++|+ +|+++++|+|. .|..||.|+|||++++.+ |++|+++ .|++|.+|.+ .+|+||+.+|.
T Consensus 31 ~~~~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~d-G~~fds~----~p~~f~lG~g-~vi~G~eeaL~ 104 (157)
T 2jwx_A 31 PAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQEE----PELVFTLGDC-DVIQALDLSVP 104 (157)
T ss_dssp CCCCSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTT-SCEEEEE----EEEEEETTTT-SSCHHHHHHTT
T ss_pred ccccccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECC-CCEeecC----CCEEEEeCCC-ChhHHHHHHHc
Confidence 34567889999996 89999999997 899999999999999876 8999984 7999999999 89999999999
Q ss_pred cCCCCcEEEEEEeCCCCcCCCC-CCCCCCCCCCCceEEEEEEeecccCcc
Q 024876 118 SMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETKE 166 (261)
Q Consensus 118 ~Mk~Ge~~~~~i~~~~~yg~~g-~~~~~~ip~~~~l~~~iel~~v~~~~~ 166 (261)
+|++|++++|+||+.++||..+ . .+.|||+++|+|+|+|++|.....
T Consensus 105 gMk~Ge~~~v~IP~~~aYG~~g~~--~~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 105 LMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp TSCTTCEEEEEECGGGTTTTTCCS--SSCCCTTCCEEEEEEEEEEEECSC
T ss_pred CCCCCCEEEEEECchhcCCccccc--CCCcCCCCeEEEEEEEEEEEcccc
Confidence 9999999999999999999988 5 467999999999999999987654
No 14
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=171.40 Aligned_cols=115 Identities=23% Similarity=0.415 Sum_probs=105.2
Q ss_pred ceeEeCCcEEEEEEecCC--CCCCCCCCEEEEEEEEEEeCCCeEEecCcC--CCcCcEEecCCccchhHHHHHHhhcCCC
Q 024876 46 EVEVLHEKVTKQIIKEGH--GQKPSKYSTCFLHYRAWAESTRHKFDDTWL--EQQPLEMVLGKEKKEMTGLAIGVSSMKA 121 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~--G~~p~~g~~V~v~y~~~~~~~g~~~~st~~--~~~~~~~~lG~~~~~i~gle~~l~~Mk~ 121 (261)
.+.++++|++|+++++|+ |..|..||.|+|||++++.++|++|++++. .+.|+.|.+|.+ .+++||+.+|.+|++
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~-~~i~G~e~~l~gm~~ 84 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGIL-EALKGWDQGLKGMCV 84 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSC-SSCHHHHHHSTTCCT
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCC-ChhHHHHHHHhCCCC
Confidence 455678999999999999 669999999999999999844999999874 468999999999 899999999999999
Q ss_pred CcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccC
Q 024876 122 GEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (261)
Q Consensus 122 Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~ 164 (261)
|+++.|.|||.++||..+. +.|||+++|+|+|+|++|.+.
T Consensus 85 Ge~~~~~ip~~~aYG~~g~---~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 85 GEKRKLIIPPALGYGKEGK---GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp TCEEEEEECGGGTTTTTCB---TTBCTTCCEEEEEEEEEEECC
T ss_pred CCEEEEEEChHHhcCCCCC---CCCCCCCeEEEEEEEEEEEcC
Confidence 9999999999999999985 589999999999999999764
No 15
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.93 E-value=1.9e-25 Score=165.92 Aligned_cols=106 Identities=31% Similarity=0.594 Sum_probs=98.8
Q ss_pred cEEEEEEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeC
Q 024876 53 KVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 53 gi~k~vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
||+|+++++|+|.. |..||.|+|||++++.+ |++|++++..+.|++|.+|.+ .+++||+.+|.+|++|++++|.|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED-GKKFDSSRDRNKPFKFMLGKQ-EVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSC-CSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEeCCC-ChHHHHHHHHhCCCCCCEEEEEECH
Confidence 78999999999995 99999999999999875 899999976667999999999 8999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 132 ELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 132 ~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
.++||..+. ++.||++++|+|+|+|++|+
T Consensus 79 ~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 79 DYAYGATGH--PGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred HHccCCCCC--CCCcCCCCeEEEEEEEEEeC
Confidence 999999886 46799999999999999874
No 16
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.93 E-value=3.7e-25 Score=167.19 Aligned_cols=112 Identities=23% Similarity=0.359 Sum_probs=103.7
Q ss_pred CCcceeEeCCc-EEEEEEecCCCC--CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcC
Q 024876 43 VDSEVEVLHEK-VTKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSM 119 (261)
Q Consensus 43 ~~~~~~~~~~g-i~k~vl~~G~G~--~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~M 119 (261)
..+|+.++++| ++|+++++|+|. .|..||.|+|||++++.+ |++|+++ .|+.|.+|.+ .+++||+.+|.+|
T Consensus 3 ~~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~d-G~~~ds~----~p~~f~lG~~-~~i~g~e~~l~gm 76 (118)
T 2awg_A 3 PEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQEE----PELVFTLGDC-DVIQALDLSVPLM 76 (118)
T ss_dssp TTCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTT-SCEEEEE----EEEEEETTSS-CSCHHHHHHGGGS
T ss_pred cccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC-CCEEECC----CCEEEEECCC-ChhHHHHHHHhCC
Confidence 45788999999 999999999997 899999999999999865 8999984 7999999999 8999999999999
Q ss_pred CCCcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 120 KAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 120 k~Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
++|+++.|.||+.++||..+. ++.||++++|+|+|+|+++.
T Consensus 77 ~~Ge~~~~~ip~~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 77 DVGETAMVTADSKYCYGPQGR--SPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred CCCCEEEEEEChHHccCCCCC--CCccCCCCeEEEEEEEEEec
Confidence 999999999999999999886 46799999999999999985
No 17
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.93 E-value=2.9e-25 Score=170.46 Aligned_cols=111 Identities=27% Similarity=0.499 Sum_probs=102.0
Q ss_pred eeEeCCcEEEE--EEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCc
Q 024876 47 VEVLHEKVTKQ--IIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGE 123 (261)
Q Consensus 47 ~~~~~~gi~k~--vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge 123 (261)
...+++|++++ ++++|+|.. |..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++||
T Consensus 17 ~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~e~aL~gm~~Ge 94 (130)
T 2lgo_A 17 QGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPD-GKQFDSSRSRGKPFQFTLGAG-EVIKGWDQGVATMTLGE 94 (130)
T ss_dssp CSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTT-SCEEECTTTTTCCEEEETTST-TSCHHHHHHHHHSCTTE
T ss_pred ceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECC-CCEEEccCcCCCCEEEEeCCC-CccHHHHHHHhCCCCCC
Confidence 34567998888 999999996 99999999999999865 899999987778999999999 89999999999999999
Q ss_pred EEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeec
Q 024876 124 HALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (261)
Q Consensus 124 ~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v 161 (261)
++.|.|||.++||..+. ++.|||+++|+|+|+|++|
T Consensus 95 ~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 95 KALFTIPYQLAYGERGY--PPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEEECTTTSTTTTCC--STTSCSSCCEEEEEEEEEC
T ss_pred EEEEEECcHHHCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 99999999999999886 4679999999999999975
No 18
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.92 E-value=3.7e-25 Score=171.00 Aligned_cols=111 Identities=32% Similarity=0.504 Sum_probs=103.0
Q ss_pred eCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
+++|++|+++++|+|. .|..||.|+|||++++.+ |++|++++..+.|++|.+|.+ .+++||+.+|.+|++|+++.|+
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~~-~vi~G~e~~l~gm~~Ge~~~v~ 89 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN-GTKFDSSRDRGDQFSFNLGRG-NVIKGWDLGVATMTKGEVAEFT 89 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTTT-SSCHHHHHHHTTCCBTCEEEEE
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECC-CCEEEecCcCCCCEEEEeCCC-CccHHHHHHHhcCCCCCEEEEE
Confidence 4699999999999998 799999999999999866 899999876668999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccC
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~ 164 (261)
|||.++||..+. ++.||++++|+|+|+|++|...
T Consensus 90 ip~~~aYG~~g~--~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 90 IRSDYGYGDAGS--PPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC-
T ss_pred EChHHcCCCCCC--CCCcCcCCcEEEEEEEEEeecC
Confidence 999999999887 5789999999999999999764
No 19
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.92 E-value=4.8e-25 Score=182.28 Aligned_cols=108 Identities=24% Similarity=0.385 Sum_probs=101.2
Q ss_pred ceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~ 125 (261)
.+.++++|++|+++++|+|..|..||.|+|||++++.+ |++|++| +.|++|.+| .+|+||+.+|.+|++|+++
T Consensus 111 gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~d-G~vfDss---~~P~~f~lG---~vI~G~eeaL~gMk~Gek~ 183 (219)
T 3oe2_A 111 GVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD-GKIFDQS---TQPQWFRLD---SVISGWTSALQNMPTGAKW 183 (219)
T ss_dssp TCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTT-SCEEEEC---SSCEEEEGG---GSCHHHHHHHTTCCTTCEE
T ss_pred CcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECC-CCEeecc---CCcEEEEec---chhHHHHHHHhCCCCCCEE
Confidence 36688999999999999999999999999999999886 8999998 789999998 6899999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
+|+|||.++||..|. ++.|||+++|+|+|+|++|+
T Consensus 184 ~v~IPp~lAYG~~g~--~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 184 RLVIPSDQAYGAEGA--GDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred EEEECchhcCCCCCC--CCCCCCCCeEEEEEEEEEEe
Confidence 999999999999987 45699999999999999985
No 20
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.92 E-value=1.1e-24 Score=167.16 Aligned_cols=117 Identities=31% Similarity=0.483 Sum_probs=102.6
Q ss_pred cceeEeCCc-EEEEEEecC-C--CCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCC
Q 024876 45 SEVEVLHEK-VTKQIIKEG-H--GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMK 120 (261)
Q Consensus 45 ~~~~~~~~g-i~k~vl~~G-~--G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk 120 (261)
.++.++++| ++|+|+++| . |..|..||.|+|||++++..+|++|++++..+.|++|.+|.+ .+++||+.+|.+|+
T Consensus 8 ~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g-~~i~g~e~~l~gm~ 86 (129)
T 2vn1_A 8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQG-EVIKGWDICVSSMR 86 (129)
T ss_dssp EEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSS-SSCHHHHHHHTTCC
T ss_pred CCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCC-CcCHHHHHHHhCCC
Confidence 356677777 456799976 4 569999999999999998334899999987778999999999 89999999999999
Q ss_pred CCcEEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccC
Q 024876 121 AGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (261)
Q Consensus 121 ~Ge~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~ 164 (261)
+|+++.|.|||.++||..+. ++.||||++|+|+|+|++|...
T Consensus 87 ~Ge~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 87 KNEKCLVRIESMYGYGDEGC--GESIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp TTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECC
T ss_pred CCCEEEEEEChHHcCCCCCC--CCCcCCCCeEEEEEEEEEEecC
Confidence 99999999999999999886 4679999999999999999753
No 21
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=3.6e-25 Score=171.12 Aligned_cols=118 Identities=22% Similarity=0.356 Sum_probs=107.8
Q ss_pred CCCCcceeEeCCc-EEEEEEecCCCC--CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhh
Q 024876 41 PKVDSEVEVLHEK-VTKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVS 117 (261)
Q Consensus 41 ~~~~~~~~~~~~g-i~k~vl~~G~G~--~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~ 117 (261)
+...+|+.++++| ++|+++++|+|. .|..||.|+|||++++.+ |++|++ ..|+.|.+|.+ .+++||+.+|.
T Consensus 5 ~~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~d-G~~fds----~~p~~f~lG~g-~~i~G~e~~L~ 78 (135)
T 2d9f_A 5 SSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQE----EPELVFTLGDC-DVIQALDLSVP 78 (135)
T ss_dssp CCCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESS-SCEEEE----EEEEEEETTSC-CSCTTTTTTGG
T ss_pred CCcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC-CCEEec----CCCEEEEeCCC-ChhHHHHHHHh
Confidence 3456788999988 999999999997 899999999999999876 899997 37999999999 89999999999
Q ss_pred cCCCCcEEEEEEeCCCCcCCCC-CCCCCCCCCCCceEEEEEEeecccCcc
Q 024876 118 SMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETKE 166 (261)
Q Consensus 118 ~Mk~Ge~~~~~i~~~~~yg~~g-~~~~~~ip~~~~l~~~iel~~v~~~~~ 166 (261)
+|++|++++|.||+.++||..+ . ++.|||+++|+|+|+|+++....+
T Consensus 79 gm~~Ge~~~v~ip~~~aYG~~~~~--~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 79 LMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp GSCTTCEEEEEECHHHHTCTTCCS--SSCCCTTCCEEEEEEEEEEESSCS
T ss_pred CCCCCCEEEEEEChhHccCcCCcC--CCccCCCCeEEEEEEEEEeecCCc
Confidence 9999999999999999999988 4 467999999999999999998765
No 22
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.92 E-value=7.4e-25 Score=181.12 Aligned_cols=112 Identities=24% Similarity=0.347 Sum_probs=104.4
Q ss_pred ceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~ 125 (261)
.+.++++|++|+|+++|+|..|..||.|+|||++++.+ |++|++++..+.|++|.+| .+|+||+++|.+|++|+++
T Consensus 100 ~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d-G~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~ 175 (213)
T 1fd9_A 100 GVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID-GTVFDSTEKTGKPATFQVS---QVIPGWTEALQLMPAGSTW 175 (213)
T ss_dssp TEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHCSCEEEEGG---GSCHHHHHHHTTCCTTCEE
T ss_pred CcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECC-CCEEeeccccCCCEEEEcC---chhhHHHHHHcCCCCCCEE
Confidence 36788999999999999999999999999999999886 8999999877789999995 7999999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024876 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~ 163 (261)
+|+|||.++||..+. ++.||||++|+|+|+|++|.+
T Consensus 176 ~v~IP~~laYG~~g~--~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 176 EIYVPSGLAYGPRSV--GGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EEEECGGGTTTTCCC--SSSCCTTCCEEEEEEEEEEEC
T ss_pred EEEECchhccCccCC--CCCCCCCCeEEEEEEEEEEEc
Confidence 999999999999886 467999999999999999975
No 23
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.92 E-value=1.2e-24 Score=179.94 Aligned_cols=112 Identities=30% Similarity=0.487 Sum_probs=105.2
Q ss_pred ceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~ 125 (261)
.+.++++|++|+++++|+|..|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++|+++
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~d-G~~fdss~~~~~P~~f~lG~g-~vi~G~eeaL~gM~~Ge~~ 175 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD-GQKFDSSKDRNDPFAFVLGGG-MVIKGWDEGVQGMKVGGVR 175 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETT-SCEEEESGGGTCCEEEETTSS-SSCHHHHHHHTTCBTTCEE
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECC-CCEEEEccccCCCEEEEeCCC-ccchhHHHHHhCCCCCCEE
Confidence 46678999999999999999999999999999999976 899999988888999999999 8999999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeec
Q 024876 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v 161 (261)
.|.|||.++||..+. ++.|||+++|+|+|+|++|
T Consensus 176 ~v~Ipp~~aYG~~g~--~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 176 RLTIPPQLGYGARGA--AGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred EEEECcHHhCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 999999999999987 4569999999999999975
No 24
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.92 E-value=7.1e-25 Score=168.19 Aligned_cols=115 Identities=23% Similarity=0.315 Sum_probs=103.8
Q ss_pred cceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhc------
Q 024876 45 SEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS------ 118 (261)
Q Consensus 45 ~~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~------ 118 (261)
..+..+++|++|+++++|+|..|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+
T Consensus 5 ~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~~-~~i~G~~~~L~G~~~~~~ 82 (129)
T 1u79_A 5 CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN-GKVFDSSYNRGKPLTFRIGVG-EVIKGWDQGILGSDGIPP 82 (129)
T ss_dssp CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHHCBTTBCC
T ss_pred CccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEeCCC-CccHHHHHHhcccccccc
Confidence 346788999999999999999999999999999999876 899999976668999999998 899999999998
Q ss_pred CCCCcEEEEEEeCCCCcCCCCCC---CCCCCCCCCceEEEEEEeec
Q 024876 119 MKAGEHALLHVGWELGYGKEGSF---SFPNVSPMADLVYEVVLIGF 161 (261)
Q Consensus 119 Mk~Ge~~~~~i~~~~~yg~~g~~---~~~~ip~~~~l~~~iel~~v 161 (261)
|++|++++|.|||.++||..+.. .++.||||++|+|+|+|++|
T Consensus 83 m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 83 MLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred cCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999999998741 12479999999999999986
No 25
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.91 E-value=3.2e-24 Score=178.51 Aligned_cols=110 Identities=26% Similarity=0.519 Sum_probs=102.1
Q ss_pred ceeEeCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEE
Q 024876 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 46 ~~~~~~~gi~k~vl~~G~G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~ 125 (261)
.+.++++|++|+++++|+|..|..||.|+|||++++.+ |++|++++..+.|++|.+| .+|+||+++|.+|++|+++
T Consensus 115 ~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d-G~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~ 190 (224)
T 1q6h_A 115 GVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD---GVIPGWTEGLKNIKKGGKI 190 (224)
T ss_dssp TEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT-SCEEEEGGGGTSCEEEEGG---GSCHHHHHHGGGSCTTCEE
T ss_pred CeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCC-CCEEeeccccCCCEEEEcC---CcchhHHHHHcCCCCCCEE
Confidence 35678999999999999999999999999999999886 8999999887789999996 7999999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024876 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~ 162 (261)
+|+|||.++||..+. +.||||++|+|+|+|++|.
T Consensus 191 ~v~IP~~laYG~~g~---~~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 191 KLVIPPELAYGKAGV---PGIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp EEEECGGGTTTTTCB---TTBCTTCCEEEEEEEEEEC
T ss_pred EEEECchhhcCcCCC---CCCCCCCEEEEEEEEEEeC
Confidence 999999999999886 4599999999999999874
No 26
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.88 E-value=3.1e-22 Score=172.62 Aligned_cols=111 Identities=33% Similarity=0.549 Sum_probs=103.6
Q ss_pred eCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 50 LHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~~-p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
+++||+|+|+++|+|.. |..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++|+++.|+
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~e~aL~gm~~Ge~~~v~ 126 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKG-EVIKAWDIAIATMKVGEVCHIT 126 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT-SCEEEESTTSSSCEEEETTTT-SSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECC-CCEEEecccCCCCEEEEECCc-ChhHHHHHHHhcCCCCCEEEEE
Confidence 46899999999999995 99999999999999866 899999987778999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccC
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~ 164 (261)
|||.++||..+. ++.||++++|+|+|+|++|...
T Consensus 127 ipp~~aYG~~g~--~~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 127 CKPEYAYGSAGS--PPKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECE
T ss_pred ECcHHhCCCcCc--cCCCCCCCcEEEEEEeeeeccc
Confidence 999999999887 5789999999999999998753
No 27
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.88 E-value=2.9e-22 Score=147.39 Aligned_cols=98 Identities=31% Similarity=0.481 Sum_probs=89.7
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCC
Q 024876 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (261)
Q Consensus 64 G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~ 143 (261)
|..++.||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+++||+.+|.+|++|+++.|.||+.++||..+. +
T Consensus 3 g~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~--~ 78 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLED-GTEFDSSLPQNQPFVFSLGTG-QVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGA--P 78 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTT-SCEEEESTTTTCCEEEETTSS-SSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCB--T
T ss_pred CCcCCCCCEEEEEEEEEECC-CCEEEeCCCCCCCEEEEeCCC-CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC--C
Confidence 34789999999999999865 899999987778999999999 8999999999999999999999999999999886 4
Q ss_pred CCCCCCCceEEEEEEeecccCc
Q 024876 144 PNVSPMADLVYEVVLIGFDETK 165 (261)
Q Consensus 144 ~~ip~~~~l~~~iel~~v~~~~ 165 (261)
+.||++++|+|+|+|+++....
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~~ 100 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERRT 100 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGGC
T ss_pred CCcCcCCeEEEEEEEEEecccC
Confidence 6799999999999999998654
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.85 E-value=3.1e-23 Score=185.00 Aligned_cols=118 Identities=29% Similarity=0.509 Sum_probs=2.9
Q ss_pred cceeEeCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCc
Q 024876 45 SEVEVLHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGE 123 (261)
Q Consensus 45 ~~~~~~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge 123 (261)
....++++||+|+|+++|+|. .|..||.|+|||++++.+ |++|++++..+.|+.|.+|.+ .+|+||+.+|.+|++|+
T Consensus 4 ~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~~~lG~g-~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 4 EENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLD-GKKFDSSRDRDDTFKFKLGQG-QVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECC-CCEEEEcccCCCcEEEEeCCC-ccchHHHHHHhcCCCCC
Confidence 345678999999999999995 899999999999999986 899999988888999999999 89999999999999999
Q ss_pred EEEEEEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccCcc
Q 024876 124 HALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKE 166 (261)
Q Consensus 124 ~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~~~ 166 (261)
++.|+|||+++||..+. ++.||++++|+|+|+|+++....+
T Consensus 82 ~~~~~ip~~~aYG~~g~--~~~Ip~~~~l~f~vel~~~~~~~d 122 (356)
T 3jxv_A 82 NALFTIPPELAYGESGS--PPTIPANATLQFDVELLSWTSVRD 122 (356)
T ss_dssp --------------------------------------CCEEE
T ss_pred EEEEEEChHHhCCCCCC--CCCcCCCCEEEEEeeEEeeecccc
Confidence 99999999999999987 568999999999999999976543
No 29
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.85 E-value=7.1e-20 Score=168.20 Aligned_cols=186 Identities=18% Similarity=0.281 Sum_probs=150.5
Q ss_pred CCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCcc--chhHHHHHHhhcCCCCcEEEE
Q 024876 51 HEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEK--KEMTGLAIGVSSMKAGEHALL 127 (261)
Q Consensus 51 ~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~--~~i~gle~~l~~Mk~Ge~~~~ 127 (261)
++++.+++++.|.|. +|..|+.|+|||++++ + |++|+++ +++|.+|.|. .++++|+.|+..|+.||++.|
T Consensus 145 dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~-g~~f~~~-----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l 217 (457)
T 1kt0_A 145 DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-G-GRMFDCR-----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCIL 217 (457)
T ss_dssp SSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-T-TEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEE
T ss_pred CcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-C-CeEEecC-----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEE
Confidence 568999999999998 8999999999999998 4 8999974 6999999761 378999999999999999999
Q ss_pred EEeCCCCcCCCCCCCCCCCCCCCceEEEEEEeecccCccccc-cC-------------------CCchh-------hHhh
Q 024876 128 HVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKA-RS-------------------DMTVE-------ERIG 180 (261)
Q Consensus 128 ~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~~~~~~e-~~-------------------~l~~e-------e~~~ 180 (261)
.++|.++|+..|... ..||+++.+.|.+.+..+.+....-. .. .-..+ +.+.
T Consensus 218 ~i~P~~ay~~~g~~~-~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~ 296 (457)
T 1kt0_A 218 YLGPRYGFGEAGKPK-FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVS 296 (457)
T ss_dssp EECGGGTTCSSCBGG-GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EECcccccCCCCCcc-cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999988631 36999999999999999887764100 00 00000 0011
Q ss_pred h-------------------hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHH
Q 024876 181 A-------------------ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAA 241 (261)
Q Consensus 181 ~-------------------a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~ 241 (261)
. +..+...|..+++.++|..|+..|++||.+-.. ...+|+|+|.
T Consensus 297 ~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~a~~~~g~ 359 (457)
T 1kt0_A 297 WLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-----------------NEKGLYRRGE 359 (457)
T ss_dssp HHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----------------CHHHHHHHHH
T ss_pred HhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-----------------cHHHHHHHHH
Confidence 1 233457789999999999999999999986432 2468999999
Q ss_pred HHHHhhCHHHHHHHHHhhcC
Q 024876 242 CLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 242 c~lKl~~~~~ai~~c~~aL~ 261 (261)
||+++++|++|+.++.+||+
T Consensus 360 a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 360 AQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHccCHHHHHHHHHHHHH
Confidence 99999999999999999874
No 30
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.85 E-value=6.2e-21 Score=170.09 Aligned_cols=111 Identities=29% Similarity=0.403 Sum_probs=101.2
Q ss_pred CCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCc-CCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEE
Q 024876 51 HEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTW-LEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (261)
Q Consensus 51 ~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~-~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~ 128 (261)
+++++++++++|.|. .|..||.|+|||++++.+ |++|+++. ..+.|+.|.+|.+ .+|+||+.+|.+|++||++.|+
T Consensus 243 d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~d-G~~fd~~~~~~~~p~~f~~G~g-~~i~G~e~~l~gm~~Ge~~~v~ 320 (356)
T 3jxv_A 243 DKKILKKVLKEXEGYERPNEGAVVTVKITGKLQD-GTVFLKKGHDEQEPFEFKTDEE-AVIEGLDRAVLNMKKGEVALVT 320 (356)
T ss_dssp TCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESS-SCEEEEESCTTSCCCEEETTTT-SSCHHHHHHHTTCCBTCEEEEE
T ss_pred ccceeEEeeecccccCCCCCCCEEEEEEEEEECC-CCEEeeccccCCcCEEEEECCC-ccchHHHHHHhCCCCCCEEEEE
Confidence 578999999999995 999999999999999987 89999873 5578999999999 8999999999999999999999
Q ss_pred EeCCCCcCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024876 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (261)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~v~~ 163 (261)
|||+++||..+....+.||++++|+|+|+|++|.+
T Consensus 321 ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 321 IPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp ECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred EChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 99999999987532467999999999999999874
No 31
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.83 E-value=5.8e-20 Score=158.35 Aligned_cols=110 Identities=24% Similarity=0.423 Sum_probs=98.0
Q ss_pred eCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccc---hhHHHHHHhhcCCCCcEE
Q 024876 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKK---EMTGLAIGVSSMKAGEHA 125 (261)
Q Consensus 50 ~~~gi~k~vl~~G~G~-~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~---~i~gle~~l~~Mk~Ge~~ 125 (261)
.++|+.|+++++|+|. .|..||.|+|||++++ + |++|++ .++.|.+|.+ . +|+||+.+|.+|++||++
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-d-G~~fd~-----~~~~f~lG~g-~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQ-----RELRFEIGEG-ENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-T-TEEEEE-----EEEEEETTCG-GGGTCCHHHHHHHTTCCTTCEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-C-CEEEec-----CCeEEEecCC-cccccchhHHHHHhCCCCCcEE
Confidence 4688999999999999 7999999999999998 4 899997 3899999998 6 599999999999999999
Q ss_pred EEEEeCCCCcCCCCCCCCC-CCCCCCceEEEEEEeecccCccccccCC
Q 024876 126 LLHVGWELGYGKEGSFSFP-NVSPMADLVYEVVLIGFDETKEGKARSD 172 (261)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~-~ip~~~~l~~~iel~~v~~~~~~~e~~~ 172 (261)
.|+|||.++||..+. +. .||+|++++|+|+|++|.+.++ .|+
T Consensus 238 ~v~ip~~~~yG~~~~--~~~~IP~~~~l~f~V~L~~i~~~~~---~W~ 280 (280)
T 1q1c_A 238 IVYLKPSYAFGSVGK--EKFQIPPNAELKYELHLKSFEKAKE---SWE 280 (280)
T ss_dssp EEEECGGGTTTTTCB--GGGTBCTTCCEEEEEEEEEEECCCC------
T ss_pred EEEEChhHcCCcCCC--ccCccCCCCeEEEEEEEEEEeCCCC---CCC
Confidence 999999999999875 23 5999999999999999998886 663
No 32
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.70 E-value=2.7e-17 Score=130.75 Aligned_cols=72 Identities=15% Similarity=0.249 Sum_probs=67.0
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCC
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG 139 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g 139 (261)
.++.|+.|+|||++++.+ |++|++|+..+.|+.|.+|.+ .+|+||+.+|.+|++|+++.|.|||.++||...
T Consensus 24 ~i~~gd~V~v~Y~g~l~d-G~vfDss~~~~~P~~f~lG~g-~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDD-GTTAESTRNNGKPALFRLGDA-SLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEECCC-CccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 578999999999999876 899999987668999999999 899999999999999999999999999999853
No 33
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.68 E-value=7e-17 Score=120.48 Aligned_cols=87 Identities=17% Similarity=0.311 Sum_probs=74.8
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCC
Q 024876 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (261)
Q Consensus 64 G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~ 143 (261)
+..++.||.|+|||++++ + |++|+++. +.|+.|.+|.+ .+|+||+.+|.+|++|+++.|.|++...||..+.
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-d-G~~fdss~--~~p~~f~lG~g-~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-D-NKKLASAS--AQNYELTIGSN-SFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-T-TEECSTTC--CSEEEEEETSS-CSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CCCCCCCCEEEEEEEEEE-C-CEEcccCC--ccCEEEEECCC-ChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 447899999999999998 5 99999984 67999999999 8999999999999999999999973333887552
Q ss_pred CCCCCCCceEEEEEEeecc
Q 024876 144 PNVSPMADLVYEVVLIGFD 162 (261)
Q Consensus 144 ~~ip~~~~l~~~iel~~v~ 162 (261)
++++++|+|+|++|+
T Consensus 99 ----~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 ----QSKPVTFEVVLKAIK 113 (113)
T ss_dssp ----GSCCCEEEEEECCBC
T ss_pred ----CCCEEEEEEEEEEEC
Confidence 579999999999874
No 34
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.67 E-value=9.8e-17 Score=126.23 Aligned_cols=70 Identities=23% Similarity=0.332 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEEEEEeCCCeEEecCcCC-------------CcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCC
Q 024876 67 PSKYSTCFLHYRAWAESTRHKFDDTWLE-------------QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWEL 133 (261)
Q Consensus 67 p~~g~~V~v~y~~~~~~~g~~~~st~~~-------------~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~ 133 (261)
++.||.|+|||++++ + |++|++|+.. +.|+.|.+|.+ .+|+||+.+|.+|++|+++.|.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g-~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG-QVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSS-SSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccccccccccccccccCCCCEEEEECCC-cHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 678999999999999 5 9999999752 37999999999 899999999999999999999999999
Q ss_pred CcCCCC
Q 024876 134 GYGKEG 139 (261)
Q Consensus 134 ~yg~~g 139 (261)
+||..+
T Consensus 79 aYG~~~ 84 (157)
T 3pr9_A 79 AFGKRD 84 (157)
T ss_dssp TTCCCC
T ss_pred hcCCCC
Confidence 999865
No 35
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.64 E-value=1e-15 Score=120.01 Aligned_cols=72 Identities=21% Similarity=0.340 Sum_probs=65.6
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCC
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG 139 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g 139 (261)
.++.|+.|++||++++..+|++|++|+. ..|+.|.+|.+ .+++||+.+|.+|++|+++.|.|||..+||..+
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~-~~p~~f~~G~g-~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNIS-KEPLEFIIGTN-QIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTT-TCCEEEETTCC-CSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCC-CcCEEEEECCC-CccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 5789999999999998734899999965 46999999999 899999999999999999999999999999864
No 36
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.64 E-value=2.5e-16 Score=123.49 Aligned_cols=73 Identities=26% Similarity=0.370 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEecCcC-------------CCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCC
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDDTWL-------------EQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWE 132 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~st~~-------------~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~ 132 (261)
.++.||.|++||++++.+ |++|++|+. ...|+.|.+|.+ .+++||+.+|.+|++|+++.|.|||+
T Consensus 1 ~i~~gd~V~v~Y~g~~~d-G~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g-~vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLES-GDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEG-QLIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCCTTCEEEECCEECCTT-SCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTT-CSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCCEEEEEEEEEECC-CCEEEecchhhcccccccccccCCCCEEEEECCC-ChhHHHHHHHcCCCCCCEEEEEECcH
Confidence 367899999999999865 899999963 346999999999 89999999999999999999999999
Q ss_pred CCcCCCCC
Q 024876 133 LGYGKEGS 140 (261)
Q Consensus 133 ~~yg~~g~ 140 (261)
.+||..+.
T Consensus 79 ~aYG~~~~ 86 (151)
T 1ix5_A 79 KAYGNRNE 86 (151)
T ss_dssp TSSCSCCS
T ss_pred HHCCCCCc
Confidence 99998653
No 37
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.63 E-value=6.1e-16 Score=128.66 Aligned_cols=97 Identities=21% Similarity=0.296 Sum_probs=82.3
Q ss_pred CCCCCEEEEEEEEEEeCCCeEEecCcCC-------------CcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCC
Q 024876 67 PSKYSTCFLHYRAWAESTRHKFDDTWLE-------------QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWEL 133 (261)
Q Consensus 67 p~~g~~V~v~y~~~~~~~g~~~~st~~~-------------~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~ 133 (261)
++.||.|+|||++++ + |++|++|+.. +.|+.|.+|.+ .+++||+.+|.+|++|+++.|.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g-~vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG-QVLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSS-SSCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccchhcccccccccccCCCCEEEEeCCC-cHHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 578999999999999 5 9999999752 37999999999 899999999999999999999999999
Q ss_pred CcCCCCCCC--------------CC---------------------------CCC-CCCceEEEEEEeecccCcc
Q 024876 134 GYGKEGSFS--------------FP---------------------------NVS-PMADLVYEVVLIGFDETKE 166 (261)
Q Consensus 134 ~yg~~g~~~--------------~~---------------------------~ip-~~~~l~~~iel~~v~~~~~ 166 (261)
+||..+... .+ +.| +|.+|.|+|+|+++.....
T Consensus 79 AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~ 153 (231)
T 3prb_A 79 AFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKK 153 (231)
T ss_dssp TTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHH
T ss_pred hcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCH
Confidence 999864200 00 112 6999999999999987764
No 38
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.63 E-value=2e-15 Score=122.75 Aligned_cols=70 Identities=21% Similarity=0.323 Sum_probs=64.4
Q ss_pred CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCC
Q 024876 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG 139 (261)
Q Consensus 67 p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g 139 (261)
++.|+.|+|||++++.+ |++|++|+. ..|++|.+|.+ .+|+||+.+|.+|++|+++.|.|||..+||..+
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~-~~P~~f~lG~g-~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTED-GVLVDESPV-SAPLDYLHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETT-TEEEEECCT-TSCCEEESSSS-SSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECC-CCEEEecCC-CCCEEEEECCC-CcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 67899999999999755 899999965 37999999999 899999999999999999999999999999864
No 39
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.62 E-value=3e-15 Score=119.44 Aligned_cols=70 Identities=21% Similarity=0.323 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCC
Q 024876 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG 139 (261)
Q Consensus 67 p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g 139 (261)
++.|+.|+|+|++++.+ |++|++|+. ..|+.|.+|.+ .+++||+.+|.+|++|+++.|.|||..+||..+
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~-~~P~~f~lG~g-~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTED-GVLVDESPV-SAPLDYLHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETT-SCEEEECCS-SSCEEEETTSC-SSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECC-CCEEeeccC-CcCEEEEECCC-CcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 67899999999999865 899999965 36999999999 899999999999999999999999999999874
No 40
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.53 E-value=1.7e-14 Score=113.63 Aligned_cols=65 Identities=20% Similarity=0.246 Sum_probs=60.5
Q ss_pred CCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCC
Q 024876 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG 139 (261)
Q Consensus 67 p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g 139 (261)
++.||.|+|||+++ .+ |++|++|+ +.|.+|.+ .+++||+.+|.+|++|+++.|.|||..+||..+
T Consensus 3 i~~gd~V~v~Y~g~-~d-G~~fdss~-----~~f~~G~g-~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VE-GEVLDQGE-----LSYLHGHR-NLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ET-TEEEEEEE-----EEEETTSS-SSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-EC-CEEEEeeE-----EEEEECCC-CcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 67899999999999 55 89999986 99999999 899999999999999999999999999999864
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.37 E-value=3.8e-12 Score=115.81 Aligned_cols=90 Identities=14% Similarity=0.241 Sum_probs=80.6
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCC
Q 024876 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (261)
Q Consensus 64 G~~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~ 143 (261)
+..+..||.|++||+++. +|+.|++++ +.|+.|.+|.| .+++||+.+|.+|++|+++.|.+++..+||..+.
T Consensus 155 ~~~~~~gD~V~i~y~g~~--dG~~fd~~~--~~~~~~~lG~g-~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--- 226 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV--DGEEFEGGK--ASDFVLAMGQG-RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--- 226 (432)
T ss_dssp SSCCCTTCEEEECEEEES--SSCBCSSCC--CSSEEEETTSC-CSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT---
T ss_pred CCCCCCCCEEEEEEEEee--CCeEccCCC--ccceEEEeCCC-CcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC---
Confidence 446899999999999984 489999986 67999999999 8999999999999999999999999999997653
Q ss_pred CCCCCCCceEEEEEEeecccCc
Q 024876 144 PNVSPMADLVYEVVLIGFDETK 165 (261)
Q Consensus 144 ~~ip~~~~l~~~iel~~v~~~~ 165 (261)
+|.+++|.|+|++|....
T Consensus 227 ----ag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 227 ----KGKAAKFAINLKKVEERE 244 (432)
T ss_dssp ----SSCEEEEEEECCEECCEE
T ss_pred ----CCceEEEEEEEEEEeccC
Confidence 578999999999998653
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.20 E-value=6.3e-12 Score=113.01 Aligned_cols=88 Identities=9% Similarity=0.192 Sum_probs=77.2
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCCCC
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN 145 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~~~ 145 (261)
.+..||.|+|||+++. +|+.|+++ .+.++.|.+|.| .+|+||+.+|.+|++|+++.|.++....||..+.
T Consensus 160 ~~~~gD~V~i~y~g~~--dG~~fd~~--~~~~~~~~lG~g-~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l----- 229 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI--DGVEFEGG--KAENFPLEMGAG-RMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL----- 229 (392)
T ss_dssp CCCTTCEEEEEEEEES--SSSCCTTC--EEEEEEEETTSC-CBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----
T ss_pred CCCCCCEEEEEEEEEE--CCEEccCC--CccceEEEecCC-CcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----
Confidence 6899999999999984 48999987 357999999999 9999999999999999999999987677876432
Q ss_pred CCCCCceEEEEEEeecccCc
Q 024876 146 VSPMADLVYEVVLIGFDETK 165 (261)
Q Consensus 146 ip~~~~l~~~iel~~v~~~~ 165 (261)
+|.+++|+|+|++|....
T Consensus 230 --aGk~~~F~V~v~~i~~~~ 247 (392)
T 1t11_A 230 --KGKAAKFAIKVNKVEARE 247 (392)
T ss_dssp --SSCEEEECCCEEEEEEEE
T ss_pred --CCCeEEEEEEEEEEEcCC
Confidence 689999999999998654
No 43
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.15 E-value=5.5e-11 Score=92.70 Aligned_cols=87 Identities=21% Similarity=0.243 Sum_probs=70.7
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-cccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHH
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-FQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 253 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai 253 (261)
.++++..+..+++.|+.+|+.|+|..|+..|.+|+.++..... ....+.++..+......+|+|+|.|++++++|.+|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 4678899999999999999999999999999999998754321 122234556678888999999999999999999999
Q ss_pred HHHHhhcC
Q 024876 254 GQCSLVSK 261 (261)
Q Consensus 254 ~~c~~aL~ 261 (261)
.+|++||+
T Consensus 84 ~~~~~al~ 91 (162)
T 3rkv_A 84 ETSSEVLK 91 (162)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999873
No 44
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.91 E-value=1.4e-09 Score=81.81 Aligned_cols=66 Identities=27% Similarity=0.320 Sum_probs=57.6
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
.+.+...++.||.+|++|+|..|+..|++|+.+-.. ...+|+|+|.||+++++|++|+.+|.+
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-----------------~~~~~~nlg~~~~~~~~~~~A~~~~~~ 67 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-----------------NITFYNNKAAVYFEEKKFAECVQFCEK 67 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----------------CHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 456777899999999999999999999999986332 146899999999999999999999999
Q ss_pred hcC
Q 024876 259 VSK 261 (261)
Q Consensus 259 aL~ 261 (261)
||+
T Consensus 68 al~ 70 (127)
T 4gcn_A 68 AVE 70 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 45
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.90 E-value=2.9e-09 Score=83.65 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=62.7
Q ss_pred HhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHH
Q 024876 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (261)
Q Consensus 178 ~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~ 257 (261)
....+..++..||.+|+.|+|..|+.+|++||++........ .. ........+|+|++.|+.++|+|++|+.+|+
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~--a~---~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~ 81 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE--AF---DHAGFDAFCHAGLAEALAGLRSFDEALHSAD 81 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS--CC---CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh--hh---hhccchHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 366788899999999999999999999999999876521110 00 0112334599999999999999999999999
Q ss_pred hhcC
Q 024876 258 LVSK 261 (261)
Q Consensus 258 ~aL~ 261 (261)
+||+
T Consensus 82 kAL~ 85 (159)
T 2hr2_A 82 KALH 85 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 46
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.84 E-value=1.2e-08 Score=81.80 Aligned_cols=105 Identities=28% Similarity=0.316 Sum_probs=77.1
Q ss_pred eEEEEEEeecccCccccccCCCchhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHh
Q 024876 152 LVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAV 231 (261)
Q Consensus 152 l~~~iel~~v~~~~~~~e~~~l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l 231 (261)
......+..+.+..+ .|.++.+++...+..++..|+.+|+.|+|..|+..|.+++.+.......... ........+
T Consensus 11 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~~ 86 (198)
T 2fbn_A 11 SSGRENLYFQGAKKS---IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ-ILLDKKKNI 86 (198)
T ss_dssp -----------CCCS---GGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH-HHHHHHHHH
T ss_pred hhhhhhhhhccccCc---hhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh-hHHHHHHHH
Confidence 344455566777766 9999999999999999999999999999999999999999986543211110 112233555
Q ss_pred hhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 232 KNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 232 ~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
...++.|+|.|++++++|.+|+..|.++|
T Consensus 87 ~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 87 EISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 67899999999999999999999999886
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.81 E-value=5.4e-09 Score=78.51 Aligned_cols=64 Identities=30% Similarity=0.444 Sum_probs=46.7
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
+.+...+++||.+|++|+|..|+..|++|+.+-... ..++.|+|.|++++|+|.+|+.++.+|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN-----------------AILYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------HHHHHHHhhHHHhhccHHHHHHHHHHH
Confidence 356678899999999999999999999999874321 235556666666666666666666555
Q ss_pred c
Q 024876 260 S 260 (261)
Q Consensus 260 L 260 (261)
|
T Consensus 74 l 74 (126)
T 4gco_A 74 I 74 (126)
T ss_dssp H
T ss_pred H
Confidence 4
No 48
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.60 E-value=5e-08 Score=86.84 Aligned_cols=87 Identities=23% Similarity=0.359 Sum_probs=70.8
Q ss_pred chhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHH
Q 024876 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 253 (261)
Q Consensus 174 ~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai 253 (261)
+.++.+..+..++..|+.+|+.|+|..|+..|++|+.++.... .....+....+......+++|+|.|++++++|++|+
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSR-AAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-HHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCc-cccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 5778889999999999999999999999999999999765421 011112222356667889999999999999999999
Q ss_pred HHHHhhcC
Q 024876 254 GQCSLVSK 261 (261)
Q Consensus 254 ~~c~~aL~ 261 (261)
.+|++||+
T Consensus 294 ~~~~~al~ 301 (370)
T 1ihg_A 294 DSCLEALE 301 (370)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999984
No 49
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.34 E-value=8.4e-07 Score=65.38 Aligned_cols=63 Identities=27% Similarity=0.419 Sum_probs=45.5
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|+.+|+.|+|..|+..|.+++.+.... ..++.|+|.|++++++|++|+..+.++|
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~~a~~~~~~~~~~~A~~~~~~al 65 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----------------ARGYSNRAAALAKLMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----------------hHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34567889999999999999999999999874321 2456666666666666666666666554
No 50
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.33 E-value=8.5e-07 Score=63.26 Aligned_cols=63 Identities=30% Similarity=0.421 Sum_probs=54.3
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
+......|+.+|+.|+|..|+..|++++...... ..++.|++.|++++|+|++|+..+.++|+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN-----------------PVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4456778999999999999999999999874321 35789999999999999999999999874
No 51
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.07 E-value=6.1e-06 Score=63.73 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=43.5
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
...+..+...|+.+|+.|+|..|+..|++++.+.... ..+++|++.|++++++|++|+..+.+
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~l~~~~~~~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN-----------------PIYLSNRAAAYSASGQHEKAAEDAEL 70 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC-----------------HHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3456678889999999999999999999999875321 23445555555555555555555544
Q ss_pred hc
Q 024876 259 VS 260 (261)
Q Consensus 259 aL 260 (261)
+|
T Consensus 71 al 72 (164)
T 3sz7_A 71 AT 72 (164)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 52
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.06 E-value=6.7e-06 Score=74.64 Aligned_cols=76 Identities=5% Similarity=0.046 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEecCcCCCcCcEEecCCccchhHHHHHHhhcCCCCcEEEEEEeCCCCcCCCCCCCCCC
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN 145 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~st~~~~~~~~~~lG~~~~~i~gle~~l~~Mk~Ge~~~~~i~~~~~yg~~g~~~~~~ 145 (261)
.+..||.|+|+|+++. +|..|+++. +.++.|.+|.+ . + |+.+|.||++|+...|.+..
T Consensus 154 ~a~~gD~V~id~~~~~--dG~~~~~~~--~~~~~l~~g~~-~--~-fe~~liG~k~Ge~~~~~vtF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN--EEGKKLTSR--EYEYVISEDED-R--P-FVKDLVGKKKGDVVEIEREY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC--TTSCEEEEE--EEEEECCSSCC-C--T-THHHHTTCCTTCEEEEEEEE--------------
T ss_pred ccCCCCEEEEEEEEEE--CCEECcCCC--CCCeEEEecCC-c--h-HHHHhCCCCCCceEEEEEee--------------
Confidence 4778999999999874 488998763 36788899988 5 3 99999999999999999843
Q ss_pred CCCCCceEEEEEEeecccCc
Q 024876 146 VSPMADLVYEVVLIGFDETK 165 (261)
Q Consensus 146 ip~~~~l~~~iel~~v~~~~ 165 (261)
+|.+..|.|+|.+|....
T Consensus 212 --aGk~a~F~VtV~~Ik~~~ 229 (433)
T 3gty_X 212 --EGKKYTYKLEVEEVYKRT 229 (433)
T ss_dssp --TTEEEEEEEEEEEEEEEC
T ss_pred --CCCeEEEEEEEEEEEEec
Confidence 356799999999998764
No 53
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.90 E-value=1.7e-05 Score=61.28 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=44.1
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhcccccc--c------cchhHHH---------HHHHhhhhhhhHHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--Q------LFGKYRD---------MALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~--~------~~~~~~~---------~~~~l~~~~~~N~A~c~lK 245 (261)
..+...|..+|+.|+|..|+..|++++.+-...... . ......+ .+..-....++|++.|+++
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~ 116 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR 116 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH
Confidence 345566777777777777777777777653221000 0 0000000 1111223567788888888
Q ss_pred hhCHHHHHHHHHhhc
Q 024876 246 LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 l~~~~~ai~~c~~aL 260 (261)
+|++++|+..+.+||
T Consensus 117 lg~~~eA~~~~~~al 131 (151)
T 3gyz_A 117 LKAPLKAKECFELVI 131 (151)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 888888888777775
No 54
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.88 E-value=3.3e-05 Score=53.99 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=50.3
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhh-hhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNP-CHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~-~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
-..|..+++.|+|..|+..|++++..-... .. ++.|+|.|++++++|++|+..+.++|
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al 62 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG-----------------KDEAYYLMGNAYRKLGDWQKALNNYQSAI 62 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST-----------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-----------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 457899999999999999999999863321 24 89999999999999999999999886
No 55
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.87 E-value=2.4e-05 Score=60.45 Aligned_cols=63 Identities=8% Similarity=-0.067 Sum_probs=45.7
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....+|..|..-.....|..|+.++.... .+..-....++|++.|+.++|+|++|+..+.+||
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al----------~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLC----------IYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH----------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------HhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34556666666666667778887765321 1122335689999999999999999999999986
No 56
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.87 E-value=3.3e-05 Score=54.76 Aligned_cols=60 Identities=15% Similarity=0.124 Sum_probs=51.7
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..+++.|+|..|+..|++++..-... ...+.|++.|+.++|+|++|+....++|
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDY-----------------VGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----------------THHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567899999999999999999999864321 3589999999999999999999999886
No 57
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.86 E-value=4e-05 Score=55.10 Aligned_cols=66 Identities=9% Similarity=-0.024 Sum_probs=53.6
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.-..|+.+|+.++|..|+..|+.|++........ ...+..++.|+|.|+.++|++..|+....+||
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~----------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEIS----------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC----------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC----------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4467999999999999999999999987532110 01234688999999999999999999998886
No 58
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.86 E-value=2.5e-05 Score=57.66 Aligned_cols=32 Identities=38% Similarity=0.360 Sum_probs=25.7
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
+..+...|+.+|+.|+|..|+..|++++....
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 40 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP 40 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc
Confidence 45567788888999999999999999887643
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.83 E-value=2.6e-05 Score=66.22 Aligned_cols=63 Identities=32% Similarity=0.352 Sum_probs=48.3
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
+..++..|+.+|+.|+|..|+..|++|+...... ..+++|+|.|++++++|++|+..+.+||+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----------------AVYYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc-----------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3457788999999999999999999999864321 24677777777777777777777777653
No 60
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.79 E-value=3.8e-05 Score=57.13 Aligned_cols=66 Identities=29% Similarity=0.400 Sum_probs=47.3
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+......|..++..|+|..|+..|++++...... .....++.|+|.|++++++|++|+..+.+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 92 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP--------------QDQAVLHRNRAACHLKLEDYDKAETEASKAI 92 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH--------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc--------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34567788999999999999999999999764321 1224566667777777777777776666654
No 61
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.79 E-value=3.9e-05 Score=57.03 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=52.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.....|..+++.|+|..|+..|++|+.+-.. ...+|.|+|.|++++|+|++|+..+.+||+
T Consensus 49 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 49 LYSNRAACLTKLMEFQRALDDCDTCIRLDSK-----------------FIKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-----------------hhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4556799999999999999999999986322 135899999999999999999999999873
No 62
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.75 E-value=6.3e-05 Score=54.61 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=52.6
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..+++.|+|..|+..|++++...... ..++.|++.|+.++|+|++|+..+.++|
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-----------------QALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----------------hHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 445677899999999999999999999874321 3588999999999999999999999886
No 63
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.74 E-value=4.7e-05 Score=58.23 Aligned_cols=59 Identities=8% Similarity=-0.039 Sum_probs=48.1
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.-..|+-+|+.|+|..|+..|++++.+-... ..++.|++.|+.++++|++|+..+.++|
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~~-----------------~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQERD-----------------PKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 3457999999999999999999999874321 3578888888888888888888888776
No 64
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.72 E-value=7e-05 Score=56.77 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=33.3
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
.......+..+...|+.++..|+|..|+..|.+++....
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~ 44 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNP 44 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 355677888899999999999999999999999998643
No 65
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.70 E-value=7.1e-05 Score=52.95 Aligned_cols=78 Identities=22% Similarity=0.112 Sum_probs=40.5
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHHH---HHHhhhhhhhHHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRDM---ALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~~---~~~l~~~~~~N~A~c~lK 245 (261)
..+...|..++..|+|..|+..|.+++........ ....++ ...+ ...-...++.|+|.|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 84 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF 84 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 34555667777777777777777777765322100 000000 0000 001113456667777777
Q ss_pred hhCHHHHHHHHHhhc
Q 024876 246 LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 l~~~~~ai~~c~~aL 260 (261)
++++.+|+....+++
T Consensus 85 ~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 85 LNRFEEAKRTYEEGL 99 (118)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHH
Confidence 777777777666654
No 66
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.69 E-value=9.2e-05 Score=54.92 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=54.9
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...|..+++.|+|..|+..|++|+.+...... .......+|.|++.|+.++++|++|+..+.++|
T Consensus 44 ~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~----------~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 44 FYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA----------DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch----------hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567899999999999999999999987543211 023345789999999999999999999999887
No 67
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.68 E-value=0.00011 Score=50.01 Aligned_cols=61 Identities=23% Similarity=0.324 Sum_probs=51.5
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..++..++|..|+..|++++...... ...+.|++.|++++++|++|+..+.+++
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 70 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----------------AEAWYNLGNAYYKQGDYDEAIEYYQKAL 70 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-----------------HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345567899999999999999999999863221 2578899999999999999999999886
No 68
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.68 E-value=6.1e-05 Score=58.86 Aligned_cols=72 Identities=18% Similarity=0.071 Sum_probs=54.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
..-.+|..+.+.|+|.+|+..|.+||.+++..-..+ ++. -...+..++|++.|+.++++|++|+.++++||+
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~--pd~----~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELN--QDE----GKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTT--STH----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCC--Cch----HHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 677889999999999999999999999743211000 000 111223449999999999999999999999974
No 69
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.68 E-value=6.3e-05 Score=58.63 Aligned_cols=60 Identities=12% Similarity=-0.019 Sum_probs=50.8
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
....|..+++.|+|..|+..|++++.+-.. ...++.|+|.|+.++|+|++|+..+.+||+
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~-----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKPG-----------------FIRAYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcch-----------------hhhHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 455688899999999999999999986322 135899999999999999999999999874
No 70
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.65 E-value=8.8e-05 Score=56.64 Aligned_cols=77 Identities=13% Similarity=0.070 Sum_probs=43.5
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHH---HHHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRD---MALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~---~~~~l~~~~~~N~A~c~lKl 246 (261)
.+...|..++..|+|..|+..|++++..-..... ....++ ... .+..-....++|++.|++.+
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc
Confidence 3456678888888888888888888765432100 000000 000 01112234567777777777
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
|++++|+....++|
T Consensus 103 g~~~~A~~~~~~al 116 (148)
T 2vgx_A 103 GELAEAESGLFLAQ 116 (148)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 77777777776665
No 71
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.63 E-value=0.00011 Score=53.01 Aligned_cols=62 Identities=21% Similarity=0.287 Sum_probs=53.1
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..++..|+|..|+..|.+++...... ..+++|+|.|++.+++|.+|+..+.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~la~~~~~~~~~~~A~~~~~~~~ 65 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN-----------------MTYITNQAAVYFEKGDYNKCRELCEKAI 65 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----------------HHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4556778999999999999999999999864321 3578999999999999999999999876
No 72
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.60 E-value=0.00012 Score=51.30 Aligned_cols=27 Identities=15% Similarity=-0.091 Sum_probs=16.2
Q ss_pred hhhhHHHHHHHHh-hCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKL-KRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl-~~~~~ai~~c~~aL 260 (261)
.++.|+|.|++++ +++++|+....+++
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 77 DVWAAKADALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HHHHHHHHHHTTCSSCSHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3556666666666 66666666655554
No 73
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.00012 Score=53.49 Aligned_cols=61 Identities=18% Similarity=0.124 Sum_probs=52.3
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..+++.|+|..|+..|++++.+-.. ...++.|+|.|++++|+|++|+....++|
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al 99 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-----------------FVRAYIRKATAQIAVKEYASALETLDAAR 99 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-----------------cHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 34566789999999999999999999986332 13589999999999999999999999886
No 74
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.59 E-value=0.00013 Score=54.86 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=43.9
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc--------cccchhHHHH---------HHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM--------FQLFGKYRDM---------ALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~--------~~~~~~~~~~---------~~~l~~~~~~N~A~c~lKl 246 (261)
.+...|..+++.|+|..|+..|++++..-..... ........+. +..-....++|++.|++.+
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 3456677778888888888888887765332100 0000000000 1111234567777777777
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
|+|++|+..+.++|
T Consensus 100 g~~~~A~~~~~~al 113 (142)
T 2xcb_A 100 GDLDGAESGFYSAR 113 (142)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 77777777777665
No 75
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.57 E-value=0.00015 Score=56.48 Aligned_cols=60 Identities=10% Similarity=0.093 Sum_probs=48.8
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
-.-..|+.++++|+|..|+..|++|+++-... ..++.++|.|+.++++|++|+..+.+++
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~la~~~~~~~~~~~a~~~~~~~~ 66 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-----------------VETLLKLGKTYMDIGLPNDAIESLKKFV 66 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34568999999999999999999999863321 3578888888888898888888887764
No 76
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.56 E-value=0.00014 Score=53.49 Aligned_cols=78 Identities=14% Similarity=0.044 Sum_probs=46.3
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHH---HHHHhhhhhhhHHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRD---MALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~---~~~~l~~~~~~N~A~c~lK 245 (261)
...-..|..+++.|+|..|+..|++++..-..... .+..++ ..+ ++..-....+.|++.|+.+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 44567788889999999999999999876432210 000000 000 0111123456677777777
Q ss_pred hhCHHHHHHHHHhhc
Q 024876 246 LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 l~~~~~ai~~c~~aL 260 (261)
+|++.+|+..+.++|
T Consensus 98 ~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 98 EHNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 777777777776665
No 77
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.52 E-value=0.00015 Score=55.24 Aligned_cols=29 Identities=10% Similarity=-0.071 Sum_probs=24.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
....|..++..|+|..|+..|++++.+-.
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 44678889999999999999999998754
No 78
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.51 E-value=0.00012 Score=61.98 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=55.6
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..+...|+.++..|+|..|+..|++|+..+..... .......+++|++.||.++++|++|+..+.+||
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHD----------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc----------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34667788999999999999999999987653211 023456799999999999999999999999987
No 79
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.50 E-value=0.00016 Score=55.50 Aligned_cols=60 Identities=12% Similarity=0.020 Sum_probs=52.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...|..+++.|+|..|+..|++++.+-.. ...+++|++.|++++++|++|+..+.++|
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPK-----------------YSKAWSRLGLARFDMADYKGAKEAYEKGI 106 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----------------CHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3566789999999999999999999987432 14689999999999999999999999886
No 80
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.50 E-value=7.7e-05 Score=67.71 Aligned_cols=74 Identities=22% Similarity=0.303 Sum_probs=62.3
Q ss_pred cCCCchhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCH
Q 024876 170 RSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY 249 (261)
Q Consensus 170 ~~~l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~ 249 (261)
...++.+++...+..+...|+.+|+.|+|..|+..|++++...... ..+++|+|.|++++|+|
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~la~~~~~~g~~ 75 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE-----------------PVFYSNISACYISTGDL 75 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHTCH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC-----------------cHHHHHHHHHHHHcCCH
Confidence 4567788888899999999999999999999999999999864321 36788899999999999
Q ss_pred HHHHHHHHhhc
Q 024876 250 EEAIGQCSLVS 260 (261)
Q Consensus 250 ~~ai~~c~~aL 260 (261)
.+|+..+.++|
T Consensus 76 ~~A~~~~~~al 86 (537)
T 3fp2_A 76 EKVIEFTTKAL 86 (537)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888876
No 81
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.49 E-value=0.00022 Score=54.55 Aligned_cols=62 Identities=11% Similarity=0.024 Sum_probs=53.3
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..+++.|+|..|+..|.+|+.+-.. ...+|+++|.|++.+|+|++|+.++.+||
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~a~~~~g~~~~~~g~~~~A~~~~~~al 124 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREET-----------------NEKALFRRAKARIAAWKLDEAEEDLKLLL 124 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-----------------chHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 345667899999999999999999999986321 14689999999999999999999999887
No 82
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.48 E-value=0.00024 Score=53.31 Aligned_cols=29 Identities=17% Similarity=-0.048 Sum_probs=24.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
....|..+++.|+|..|+..|++++.+-.
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 44568889999999999999999998754
No 83
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.47 E-value=8.3e-05 Score=54.01 Aligned_cols=79 Identities=23% Similarity=0.143 Sum_probs=45.4
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHH---HH---HHHhhhhhhhHHHHHHH
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYR---DM---ALAVKNPCHLNMAACLL 244 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~---~~---~~~l~~~~~~N~A~c~l 244 (261)
...+...|+.++..|+|..|+..|.+++........ ....++-. ++ +..-...++.|+|.|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 345556677777777777777777777765322100 00000000 00 01112356778888888
Q ss_pred HhhCHHHHHHHHHhhc
Q 024876 245 KLKRYEEAIGQCSLVS 260 (261)
Q Consensus 245 Kl~~~~~ai~~c~~aL 260 (261)
++++|++|+..+.+++
T Consensus 96 ~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 96 AMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHH
Confidence 8888888888887765
No 84
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.45 E-value=0.0003 Score=50.51 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=44.8
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHHH---HHHhhhhhhhHHHH
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRDM---ALAVKNPCHLNMAA 241 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~~---~~~l~~~~~~N~A~ 241 (261)
...+......|..++..|+|..|+..|++++........ ....++ .... .......++.++|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 344556667778888888888888888888765432100 000000 0000 01111335666667
Q ss_pred HHHHhhCHHHHHHHHHhhc
Q 024876 242 CLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 242 c~lKl~~~~~ai~~c~~aL 260 (261)
|+.++++|++|+....+++
T Consensus 89 ~~~~~~~~~~A~~~~~~~~ 107 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKAL 107 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHH
Confidence 7777777777766666654
No 85
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.00014 Score=65.29 Aligned_cols=65 Identities=20% Similarity=0.319 Sum_probs=50.5
Q ss_pred HhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHH
Q 024876 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (261)
Q Consensus 178 ~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~ 257 (261)
+...+..+...|+.+|+.|+|..|+..|++++..-.. ..++.++|.|++++|+|++|+..+.
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------------------~~~~~~la~~~~~~g~~~~A~~~~~ 63 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED------------------PVFYSNLSACYVSVGDLKKVVEMST 63 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC------------------HHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc------------------HHHHHhHHHHHHHHhhHHHHHHHHH
Confidence 4567788999999999999999999999999986421 2456677777777777777777776
Q ss_pred hhc
Q 024876 258 LVS 260 (261)
Q Consensus 258 ~aL 260 (261)
++|
T Consensus 64 ~al 66 (514)
T 2gw1_A 64 KAL 66 (514)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 86
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.45 E-value=0.00031 Score=50.48 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=51.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|++++..... ....+.|+|.|+.++|++.+|+....+++
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPT-----------------YSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456788999999999999999999986432 13578999999999999999999998876
No 87
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.44 E-value=0.00023 Score=57.44 Aligned_cols=31 Identities=16% Similarity=0.326 Sum_probs=26.1
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
..+...|+.+|+.|+|..|+..|++++....
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 38 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTN 38 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccC
Confidence 4566789999999999999999999998753
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.44 E-value=0.00023 Score=51.70 Aligned_cols=28 Identities=14% Similarity=0.009 Sum_probs=20.3
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..++.++|.|+.++|++++|+....+++
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~ 103 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVA 103 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4457777777777777777777777665
No 89
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.41 E-value=0.00013 Score=66.72 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=23.8
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
+.+..+...|+.+++.|+|..|+..|++|+..-
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~ 36 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELN 36 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 445566777777777777777777777777653
No 90
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.37 E-value=0.00033 Score=51.42 Aligned_cols=29 Identities=17% Similarity=-0.062 Sum_probs=25.0
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
....|..++..|++..|+..|++|+.+-.
T Consensus 54 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P 82 (121)
T 1hxi_A 54 WRSLGLTQAENEKDGLAIIALNHARMLDP 82 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 45678889999999999999999998743
No 91
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.36 E-value=0.00027 Score=59.75 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=54.5
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..++..|+|..|+..|++|+.+...... . ..+...+++|+|.||.++++|++|+..+.+||
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-----~-----~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal 223 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-----N-----EEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-----C-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-----c-----ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 344567799999999999999999999977643211 0 12224789999999999999999999999886
No 92
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.33 E-value=0.00033 Score=56.30 Aligned_cols=57 Identities=12% Similarity=0.055 Sum_probs=50.4
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..|..+++.|+|..|+..|++++.+-... ..+++|++.|++++|+|++|+..+.++|
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~~~~~lg~~~~~~g~~~~A~~~~~~al 115 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNN-----------------VDCLEACAEMQVCRGQEKDALRMYEKIL 115 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCC-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 38999999999999999999999874321 3689999999999999999999999987
No 93
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.32 E-value=0.00051 Score=50.37 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=51.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|.-++..|+|..|+..|++++.+... ...++.|+|.|++++++|++|+..+.++|
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 45 YYTNRALCYLKMQQPEQALADCRRALELDGQ-----------------SVKAHFFLGQCQLEMESYDEAIANLQRAY 104 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCch-----------------hHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3556788899999999999999999986432 13589999999999999999999999886
No 94
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.28 E-value=0.00053 Score=50.94 Aligned_cols=66 Identities=20% Similarity=0.108 Sum_probs=40.9
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|.+++.+...... ......++.|+|.++..+++|++|+..+.++|
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 116 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD-----------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHL 116 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-----------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4556788888888888888888888877643210 11223455556666666666666655555543
No 95
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.28 E-value=0.00048 Score=51.14 Aligned_cols=70 Identities=13% Similarity=0.013 Sum_probs=57.4
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
..+......|..++..|+|..|+..|.+++.+...... ......++.|++.+++.+++|++|+..+.++
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 75 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERIAYSNLGNAYIFLGEFETASEYYKKT 75 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC-----------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44556778899999999999999999999998653210 2334578999999999999999999999987
Q ss_pred c
Q 024876 260 S 260 (261)
Q Consensus 260 L 260 (261)
+
T Consensus 76 ~ 76 (164)
T 3ro3_A 76 L 76 (164)
T ss_dssp H
T ss_pred H
Confidence 6
No 96
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.26 E-value=0.00052 Score=49.77 Aligned_cols=63 Identities=10% Similarity=0.032 Sum_probs=52.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+-..|..++..|+|..|+..|++++...... .....++.+++.|++++|+|++|+..+.++|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~--------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~ 66 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNG--------------VYTPNALYWLGESYYATRNFQLAEAQFRDLV 66 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS--------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC--------------cccHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34567899999999999999999999875432 1223588999999999999999999998764
No 97
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.25 E-value=0.00037 Score=48.67 Aligned_cols=61 Identities=23% Similarity=0.370 Sum_probs=52.2
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..++..|+|..|+..|++++...... ..++.|+|.|++++++|++|+..+.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE-----------------SKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC-----------------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 345678899999999999999999999875321 2478899999999999999999999886
No 98
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.22 E-value=0.00033 Score=67.59 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=46.2
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHH---HHHHhhhhhhhHHHHHHH
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRD---MALAVKNPCHLNMAACLL 244 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~---~~~~l~~~~~~N~A~c~l 244 (261)
+..+...|+.+++.|+|.+|+..|++|+.+-..... .+..++ .-+ ++..-...+|+|++.|+.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 445566777777777777787777777765432100 000000 000 111122456778888888
Q ss_pred HhhCHHHHHHHHHhhc
Q 024876 245 KLKRYEEAIGQCSLVS 260 (261)
Q Consensus 245 Kl~~~~~ai~~c~~aL 260 (261)
++++|++|+..+.+||
T Consensus 89 ~~g~~~~A~~~~~kAl 104 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAI 104 (723)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 8888888888777775
No 99
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.20 E-value=0.00069 Score=53.69 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=47.7
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..+++.|+|..|+..|.+++.+... ...+++|+|.|++++++|++|+..+.+++
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al 98 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRDKH-----------------LAVAYFQRGMLYYQTEKYDLAIKDLKEAL 98 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-----------------chHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 4556677788888888888888888875321 13578999999999999999999998876
No 100
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.20 E-value=0.00034 Score=62.57 Aligned_cols=68 Identities=12% Similarity=-0.055 Sum_probs=53.4
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|.+|+..|++|+.++........ ..-.+..|.|+|.+|..+|+|++|+.++.+||
T Consensus 54 yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~--------~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 54 CNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQA--------EIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGC--------TTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 345688899999999999999999998653211110 12235679999999999999999999998876
No 101
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.19 E-value=0.00035 Score=57.74 Aligned_cols=65 Identities=11% Similarity=0.166 Sum_probs=54.6
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+-..|..+|+.|+|..|+..|++++...... .....++.++|.|++++|+|.+|+..+.++|
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~--------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 79 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH--------------EWAADAQFYLARAYYQNKEYLLAASEYERFI 79 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS--------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC--------------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3456788999999999999999999999864321 1224689999999999999999999999886
No 102
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.19 E-value=0.001 Score=46.64 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=24.2
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
....|..++..|+|..|+..|++++....
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 69 (118)
T 1elw_A 41 YSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69 (118)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhCc
Confidence 45568888899999999999999998743
No 103
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.0005 Score=55.61 Aligned_cols=62 Identities=29% Similarity=0.390 Sum_probs=54.7
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|+.++..|+|..|+..|.+++... .. ..++.++|.|++.+++|++|+..+.+++
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 65 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD-----------------ITYLNNRAAAEYEKGEYETAISTLNDAV 65 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC-----------------THHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc-----------------HHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 45678889999999999999999999999874 21 3589999999999999999999999886
No 104
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.16 E-value=0.00097 Score=48.12 Aligned_cols=28 Identities=14% Similarity=0.062 Sum_probs=21.4
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
....|..++..|+|..|+..|.+++...
T Consensus 53 ~~~la~~~~~~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 53 YSNRAACYTKLLEFQLALKDCEECIQLE 80 (133)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4456777788888888888888888764
No 105
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.14 E-value=0.0007 Score=57.74 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=45.8
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|.-+.. |+|..|+..|++|+.+...... ......+++|++.++.++|+|++|+..+.++|
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 182 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER-----------LRQAAELIGKASRLLVRQQKFDEAAASLQKEK 182 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC-----------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445566777766 8888888888888877542100 11234677888888888888888888877775
No 106
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.10 E-value=0.00055 Score=53.49 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=48.3
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhcccccccc------c--hhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL------F--GKYRDMALAVKNPCHLNMAACLLKLKRYEEAIG 254 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~------~--~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~ 254 (261)
..+--.|+.+|.+++|.+|...|++||.+......... + ......-..--..+...+|.||++++++.+|+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~ 143 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIA 143 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHH
Confidence 34456799999999999999999999987653210000 0 000000000012467789999999999999998
Q ss_pred HHH
Q 024876 255 QCS 257 (261)
Q Consensus 255 ~c~ 257 (261)
.-.
T Consensus 144 ~Le 146 (167)
T 3ffl_A 144 ILD 146 (167)
T ss_dssp HHH
T ss_pred HHh
Confidence 643
No 107
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.09 E-value=0.0016 Score=52.41 Aligned_cols=67 Identities=9% Similarity=-0.046 Sum_probs=48.8
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
....|..++..|+|..|+..|++++...... ..+......++.|++.|++++++|++|+..+.+||+
T Consensus 79 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 145 (228)
T 4i17_A 79 YIGKSAAYRDMKNNQEYIATLTEGIKAVPGN----------ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD 145 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC----------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCc----------HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh
Confidence 4455666677777777777777777653321 122334456899999999999999999999999974
No 108
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.09 E-value=0.00054 Score=54.98 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=52.9
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
..+..+|..++..|+|..|+..|++++..-...... ...........+...+++|+|.|+.++|+|++|+..+.++|+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEM-YYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHH-HHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHH-HHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445678999999999999999999999863221000 000000000112234556699999999999999999999873
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.08 E-value=0.00064 Score=59.07 Aligned_cols=62 Identities=11% Similarity=0.049 Sum_probs=53.0
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..+++.|+|..|+..|++|+.+-.. ...+++|+|.|++++++|++|+..+.+||
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al 257 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-----------------NEKGLSRRGEAHLAVNDFELARADFQKVL 257 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----------------cHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 355677899999999999999999999987432 13688999999999999999999999886
No 110
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.07 E-value=0.00075 Score=54.69 Aligned_cols=63 Identities=10% Similarity=-0.003 Sum_probs=52.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..-..|..+|+.|+|..|+..|++++...... ......+++++.|++++++|++|+....++|
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~--------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPFG--------------PYSQQVQLDLIYAYYKNADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS--------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------------hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34567899999999999999999999864321 1123588999999999999999999998876
No 111
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.07 E-value=0.00051 Score=62.24 Aligned_cols=72 Identities=7% Similarity=-0.063 Sum_probs=57.6
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|..+..+|+|.+|+..|+++|.......+.+. ......++|+|..|..+|+|++|+....+||
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H---------p~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYS---------LNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSC---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCC---------hHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 3445566788899999999999999999988764433221 2335789999999999999999999999987
Q ss_pred C
Q 024876 261 K 261 (261)
Q Consensus 261 ~ 261 (261)
+
T Consensus 410 ~ 410 (433)
T 3qww_A 410 A 410 (433)
T ss_dssp H
T ss_pred H
Confidence 3
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.06 E-value=0.00081 Score=56.90 Aligned_cols=69 Identities=13% Similarity=0.001 Sum_probs=52.3
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|+.+...|+|..|+..|.+|+.+..... . ......+|+|++.||.++|+|++|+..+.+||
T Consensus 36 A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~------~-----~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al 104 (292)
T 1qqe_A 36 AADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG------N-----EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAI 104 (292)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT------C-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC------C-----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 334455557777788999999999999988753210 0 11235689999999999999999999999887
No 113
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.05 E-value=0.0013 Score=47.18 Aligned_cols=66 Identities=12% Similarity=0.102 Sum_probs=52.6
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|..|+..|.+++........ . ......++.|+|.++.++++|++|+....+++
T Consensus 41 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 106 (131)
T 1elr_A 41 ITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE----D------YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSL 106 (131)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT----C------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhccccch----h------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456788899999999999999999987542110 0 12235689999999999999999999998876
No 114
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.05 E-value=0.00053 Score=52.17 Aligned_cols=57 Identities=12% Similarity=0.007 Sum_probs=45.2
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.|+-+..+|++.+|+..|++++..-. -....++++|.||+++++|++|+..+.++|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p-----------------~~~~~~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPR-----------------QKSIKGFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHH-----------------HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCc-----------------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777889999999999999986421 2246788999999999999999999999873
No 115
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.04 E-value=0.0012 Score=52.04 Aligned_cols=62 Identities=8% Similarity=-0.010 Sum_probs=52.9
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..+++.|+|..|+..|.+++.+... ...+++|+|.|++++++|++|+..+.++|
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-----------------NVKALYKLGVANMYFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-----------------cHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 345667899999999999999999999987322 13588999999999999999999999886
No 116
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.04 E-value=0.0011 Score=61.10 Aligned_cols=77 Identities=14% Similarity=-0.025 Sum_probs=60.5
Q ss_pred hhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHH
Q 024876 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 255 (261)
Q Consensus 176 ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~ 255 (261)
.+.++.+...-+....+..+|+|.+|+..|+++|.........+ ....+..++|+|.+|..+|+|++|+..
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~---------Hp~~a~~~~nLa~~y~~~g~~~eA~~~ 373 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT---------NLYVLRLLSIASEVLSYLQAYEEASHY 373 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT---------SHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34455666666677777889999999999999998876543322 123467899999999999999999999
Q ss_pred HHhhcC
Q 024876 256 CSLVSK 261 (261)
Q Consensus 256 c~~aL~ 261 (261)
+.++|+
T Consensus 374 ~~~aL~ 379 (490)
T 3n71_A 374 ARRMVD 379 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999873
No 117
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.02 E-value=0.0016 Score=47.95 Aligned_cols=61 Identities=20% Similarity=0.144 Sum_probs=50.9
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..++..++|..|+..|.+++...... ..++.|+|.|++.+++|++|+..+.++|
T Consensus 66 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~A~~~~~~al 126 (148)
T 2dba_A 66 VLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-----------------VKALYRRSQALEKLGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344556888899999999999999999863321 3578999999999999999999999886
No 118
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.01 E-value=0.00081 Score=58.50 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=52.3
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.+...|..+++.++|..|+..|++++.+-.. ...+++|+|.||+.+++|++|+.++.+||+
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~a~~~lg~a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-----------------NPKALFRRGKAKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456788899999999999999999986322 136899999999999999999999999874
No 119
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.00 E-value=0.00092 Score=56.56 Aligned_cols=68 Identities=24% Similarity=0.258 Sum_probs=53.8
Q ss_pred hcccchhhHHhhhh-hhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKE-EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~-~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..+... |+|..|+..|++|+.+..... . ......+++|++.+++++|+|++|+..+.+++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~------~-----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 185 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ------S-----VALSNKCFIKCADLKALDGQYIEASDIYSKLI 185 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT------C-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC------C-----hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34566778888886 999999999999999864210 0 11224689999999999999999999999886
No 120
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.98 E-value=0.001 Score=58.08 Aligned_cols=68 Identities=13% Similarity=0.191 Sum_probs=46.0
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..++..|+|..|+..|.+|+.+...... ......+++|+|.||..+|+|++|+..+.+||
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ-----------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 344566788889999999999999999987643210 12234466666666666666666666666654
No 121
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.98 E-value=0.00097 Score=56.25 Aligned_cols=68 Identities=22% Similarity=0.198 Sum_probs=55.0
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh-CHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~-~~~~ai~~c~~aL 260 (261)
+..+...|..+++.|+|..|+..|.+|+.+...... ......+|.|++.|+.++| .+++|+..+.+||
T Consensus 196 ~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS-----------MALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB-----------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCc-----------HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 335567899999999999999999999988643211 1233579999999999999 5799999999987
No 122
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.98 E-value=0.0014 Score=53.73 Aligned_cols=28 Identities=21% Similarity=0.217 Sum_probs=21.6
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
+-..|..+|+.|+|..|+..|++++...
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 33 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKK 33 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 4456778888888888888888888764
No 123
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.95 E-value=0.0012 Score=53.33 Aligned_cols=60 Identities=18% Similarity=0.151 Sum_probs=51.6
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..+++.|+|..|+..|++++..-... ...+.|++.|++++|++++|+..+.++|
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~a~~~lg~~~~~~g~~~~A~~~~~~al 66 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALKENPQD-----------------PEALYWLARTQLKLGLVNPALENGKTLV 66 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567999999999999999999999863321 3589999999999999999999999886
No 124
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.95 E-value=0.0017 Score=51.29 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=54.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.....|..+++.|+|..|+..|++++............. ...........++.|+|.|+.++|+|++|+..+.++|+
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI-LGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG-GTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH-hccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 355679999999999999999999998764321000000 00000011236899999999999999999999998874
No 125
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.93 E-value=0.0018 Score=50.49 Aligned_cols=68 Identities=9% Similarity=-0.032 Sum_probs=56.2
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..++..|+|..|+..|.+++.+...... ......+++|++.+++.+|+|++|+..+.++|
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 93 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD-----------HTAEHRALHQVGMVERMAGNWDAARRCFLEER 93 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 445667899999999999999999999998754211 22345789999999999999999999999886
No 126
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.92 E-value=0.0014 Score=57.25 Aligned_cols=69 Identities=12% Similarity=-0.021 Sum_probs=49.0
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+......|..++..|+|..|+..|.+|+.+...... ......+++|+|.|+..+|+|++|+..+.+||
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 249 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN-----------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAA 249 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3445557788999999999999999999987643200 12334567777777777777777777777665
No 127
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.92 E-value=0.0014 Score=52.92 Aligned_cols=57 Identities=19% Similarity=0.162 Sum_probs=41.9
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
...|.-++..|+|.+|+..|++|+.+- . ...+++|++.|+..+|+|++|+..+.++|
T Consensus 122 ~~lg~~~~~~g~~~~A~~~~~~al~~~-~-----------------~~~~~~~la~~~~~~g~~~~A~~~~~~al 178 (217)
T 2pl2_A 122 LQRGLVYALLGERDKAEASLKQALALE-D-----------------TPEIRSALAELYLSMGRLDEALAQYAKAL 178 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-C-----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcc-c-----------------chHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345666777777777777777777653 1 12467888888888888888888888776
No 128
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.91 E-value=0.0021 Score=48.33 Aligned_cols=59 Identities=17% Similarity=0.057 Sum_probs=48.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|..|+..|.+++...... ..++.|+|.|+.++++|++|+..+.+++
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 108 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDKKY-----------------IKGYYRRAASNMALGKFRAALRDYETVV 108 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----------------HHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4556888899999999999999999864321 2578899999999999999999988876
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.90 E-value=0.0024 Score=45.08 Aligned_cols=77 Identities=21% Similarity=0.230 Sum_probs=43.5
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHH---HHH---HhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRD---MAL---AVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~---~~~---~l~~~~~~N~A~c~lKl 246 (261)
.....|..++..|+|..|+..|.+++........ ....++-.. +.. .-...++.+++.++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 3455677788888888888888888875432100 000000000 000 11234566777777777
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
+++.+|+..+.+++
T Consensus 91 ~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 91 GDYDEAIEYYQKAL 104 (125)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 77777777776664
No 130
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.87 E-value=0.00094 Score=61.47 Aligned_cols=72 Identities=10% Similarity=-0.075 Sum_probs=57.5
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|..+..+|+|.+|+..|+++|.......+.+ .......++|+|..|..+|+|++|+..+.+||
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~---------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN---------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT---------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC---------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 444566678888899999999999999998865433322 12345789999999999999999999999987
Q ss_pred C
Q 024876 261 K 261 (261)
Q Consensus 261 ~ 261 (261)
+
T Consensus 421 ~ 421 (490)
T 3n71_A 421 A 421 (490)
T ss_dssp H
T ss_pred H
Confidence 3
No 131
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.86 E-value=0.0027 Score=45.26 Aligned_cols=28 Identities=25% Similarity=0.039 Sum_probs=21.2
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
....|..++..|+|..|+..|.+++...
T Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 76 (131)
T 2vyi_A 49 FCNRAAAYSKLGNYAGAVQDCERAICID 76 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHhcC
Confidence 3455777778888888888888888764
No 132
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.86 E-value=0.0018 Score=56.58 Aligned_cols=62 Identities=10% Similarity=-0.024 Sum_probs=52.7
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.|..++..|+|..|+..|++|+.++..... ......++.|+|.|+..++++..|+..+.+||
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al 170 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKD-----------RIEKAEFFFKMSESYYYMKQTYFSMDYARQAY 170 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCC-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 799999999999999999999998654211 12345789999999999999999999999987
No 133
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.85 E-value=0.0018 Score=56.55 Aligned_cols=65 Identities=15% Similarity=0.045 Sum_probs=53.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..-.|..+|..|+|..|+..|++|+.++..... ......++.|+|.++..++++..|+..+.+||
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al 168 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVSD-----------DIEKAEFHFKVAEAYYHMKQTHVSMYHILQAL 168 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCC-----------hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 334688889999999999999999998764211 13346789999999999999999999999987
No 134
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.84 E-value=0.0013 Score=58.19 Aligned_cols=60 Identities=15% Similarity=0.083 Sum_probs=51.3
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...|..+++.++|..|+..|++|+.+-.. ...+++|+|.||+++++|++|+.+..+||
T Consensus 275 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~a~~~lg~~~~~~g~~~eA~~~l~~Al 334 (370)
T 1ihg_A 275 CVLNIGACKLKMSDWQGAVDSCLEALEIDPS-----------------NTKALYRRAQGWQGLKEYDQALADLKKAQ 334 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCch-----------------hHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3456788899999999999999999986321 24689999999999999999999999886
No 135
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.80 E-value=0.0012 Score=59.64 Aligned_cols=72 Identities=14% Similarity=-0.005 Sum_probs=57.4
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+..+...|..+..+|+|.+|+..|+++|.......+.. .......++|+|..|..+|+|++|+....+||
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~---------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS---------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS---------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC---------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 344556668888899999999999999998875433322 12346789999999999999999999999987
Q ss_pred C
Q 024876 261 K 261 (261)
Q Consensus 261 ~ 261 (261)
+
T Consensus 399 ~ 399 (429)
T 3qwp_A 399 D 399 (429)
T ss_dssp H
T ss_pred H
Confidence 3
No 136
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.80 E-value=0.0012 Score=55.76 Aligned_cols=66 Identities=23% Similarity=0.194 Sum_probs=52.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHH-HHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEA-IGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~a-i~~c~~aL 260 (261)
.....|..+++.|+|..|+..|++|+.+...... ......+|+|++.|+.++|++++| ..+..+||
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~-----------~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINS-----------MALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB-----------CSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc-----------HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 4557789999999999999999999987532100 123457899999999999999999 66677775
No 137
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.002 Score=51.97 Aligned_cols=60 Identities=27% Similarity=0.413 Sum_probs=37.9
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|++++...... ..+++|+|.|++++++|++|+..+.++|
T Consensus 141 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 141 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----------------ARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc-----------------HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34567888888999999999999998764321 1344455555555555555555554443
No 138
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.78 E-value=0.0012 Score=51.37 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=48.2
Q ss_pred ccchhhHHhhhhhhH----------HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh------
Q 024876 184 RRKMDGNALFKEEKL----------EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK------ 247 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~----------~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~------ 247 (261)
.+...|+.+...++| .+|+..|++||.+-.. ....++|++.+|.+++
T Consensus 38 a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-----------------~~~A~~~LG~ay~~lg~l~P~~ 100 (158)
T 1zu2_A 38 NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-----------------KDEAVWCIGNAYTSFAFLTPDE 100 (158)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-----------------cHHHHHHHHHHHHHhcccCcch
Confidence 355567777777665 5999999999986332 2468999999999985
Q ss_pred -----CHHHHHHHHHhhcC
Q 024876 248 -----RYEEAIGQCSLVSK 261 (261)
Q Consensus 248 -----~~~~ai~~c~~aL~ 261 (261)
+|++|+..+.+||+
T Consensus 101 ~~a~g~~~eA~~~~~kAl~ 119 (158)
T 1zu2_A 101 TEAKHNFDLATQFFQQAVD 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHH
Confidence 89999999999873
No 139
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.78 E-value=0.0024 Score=57.84 Aligned_cols=72 Identities=13% Similarity=-0.010 Sum_probs=53.8
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...-+.+...-+.|+|.+|+..|+++|.........+ ....+..++|+|.+|..+|+|++|+..+.++|
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~---------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL 367 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS---------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKII 367 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT---------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh---------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 333444444444556899999999999998876543222 12346789999999999999999999999987
Q ss_pred C
Q 024876 261 K 261 (261)
Q Consensus 261 ~ 261 (261)
+
T Consensus 368 ~ 368 (433)
T 3qww_A 368 K 368 (433)
T ss_dssp H
T ss_pred H
Confidence 3
No 140
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.76 E-value=0.0017 Score=62.69 Aligned_cols=78 Identities=21% Similarity=0.085 Sum_probs=54.5
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHH---HHHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRD---MALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~---~~~~l~~~~~~N~A~c~lKl 246 (261)
.+...|+.+++.|+|.+|+..|++|+++-..... ....++ ..+ ++..-...+|+|+|.++.++
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3556788899999999999999999886432110 000011 011 12223456899999999999
Q ss_pred hCHHHHHHHHHhhcC
Q 024876 247 KRYEEAIGQCSLVSK 261 (261)
Q Consensus 247 ~~~~~ai~~c~~aL~ 261 (261)
|++++|+..+.+||+
T Consensus 125 g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 125 GNIPEAIASYRTALK 139 (723)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999873
No 141
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.73 E-value=0.0023 Score=54.15 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=21.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
.+...|+.++..|+|..|+..|++++...
T Consensus 5 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~ 33 (359)
T 3ieg_A 5 KHLELGKKLLAAGQLADALSQFHAAVDGD 33 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 34566777788888888888888877653
No 142
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.72 E-value=0.0042 Score=43.82 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=22.0
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
....|..++..|+|..|+..|++++...
T Consensus 46 ~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 3456777888889999999998888764
No 143
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.72 E-value=0.0037 Score=48.67 Aligned_cols=66 Identities=14% Similarity=0.009 Sum_probs=53.1
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|.+++.+...... ......++.|++.++..+|+|++|+....++|
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 109 NAYEVATVALHFGDLAGARQEYEKSLVYAQQADD-----------QVAIACAFRGLGDLAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 3556688889999999999999999987543210 12335678999999999999999999998886
No 144
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=96.70 E-value=0.0034 Score=51.61 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=54.0
Q ss_pred cchhhHHhhh--------hhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHH
Q 024876 185 RKMDGNALFK--------EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQC 256 (261)
Q Consensus 185 ~K~~Gn~~fk--------~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c 256 (261)
+...|..+|+ .|+|..|+..|++++............-.....+.......+.++|.|++++|+|.+|+..+
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 171 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTY 171 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 4456888888 99999999999999987543211100001112223333445689999999999999999999
Q ss_pred Hhhc
Q 024876 257 SLVS 260 (261)
Q Consensus 257 ~~aL 260 (261)
.++|
T Consensus 172 ~~~l 175 (261)
T 3qky_A 172 EAVF 175 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
No 145
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.69 E-value=0.0029 Score=53.84 Aligned_cols=68 Identities=12% Similarity=0.007 Sum_probs=54.1
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|.-+++.|+|..|+..|++++.+...... ......+++|++.|++.++++.+|+..+.++|
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN-----------YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-----------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 345567789999999999999999999987643210 11223488999999999999999999999875
No 146
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.67 E-value=0.0032 Score=54.98 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=27.7
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
..+..+...|..++..|+|..|+..|++++...
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 78 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAG 78 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 445566688999999999999999999999863
No 147
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.66 E-value=0.0034 Score=52.31 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=23.1
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
.+...|..++..|+|..|+..|++++...
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 35 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVG 35 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhC
Confidence 44556888888888999998888888763
No 148
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.65 E-value=0.0025 Score=51.91 Aligned_cols=70 Identities=19% Similarity=0.084 Sum_probs=55.5
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..++..|+|..|+..|.+++.+.......+ ......++.|+|.|+..+++|++|+..+.++|
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 112 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD---------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL 112 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc---------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44566789999999999999999999998763211000 12345689999999999999999999999886
No 149
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.65 E-value=0.00094 Score=48.17 Aligned_cols=53 Identities=21% Similarity=0.091 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 194 k~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..|+|..|+..|++++..-.. ......++.|++.|++++++|++|+..+.++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~--------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 54 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQ--------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGV 54 (117)
T ss_dssp -----CCCHHHHHHHHSSCCC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCC--------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 358899999999999975210 01124689999999999999999999999986
No 150
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.64 E-value=0.004 Score=50.93 Aligned_cols=59 Identities=17% Similarity=0.144 Sum_probs=43.9
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
...|..++..|+|..|+..|++++..... ...++.|+|.|++++++|++|+..+.++|+
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTT-----------------RLDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----------------CTHHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcc-----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 45667777777777777777777764321 235788899999999999999998888864
No 151
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.63 E-value=0.0018 Score=50.22 Aligned_cols=60 Identities=17% Similarity=0.236 Sum_probs=51.1
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..-..|..++..|+|..|+..|++++..-.. ....+.|+|.+++++|+|++|+..+.+++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-----------------~~~a~~~la~~~~~~g~~~~A~~~~~~a~ 67 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQS-----------------RGDVKLAKADCLLETKQFELAQELLATIP 67 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHT-----------------SHHHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-----------------cHHHHHHHHHHHHHCCCHHHHHHHHHHhh
Confidence 4556788999999999999999999975322 24689999999999999999999998876
No 152
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.60 E-value=0.0021 Score=52.42 Aligned_cols=70 Identities=14% Similarity=-0.148 Sum_probs=55.5
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+......|..++..|+|..|+..|.+++.+........ ......++.|+|.|+..+++|++|+..+.++|
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF---------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC---------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44566779999999999999999999998864321100 12335789999999999999999999999886
No 153
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.53 E-value=0.0035 Score=51.16 Aligned_cols=77 Identities=18% Similarity=-0.076 Sum_probs=43.1
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHHH---HHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRDM---ALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~~---~~~l~~~~~~N~A~c~lKl 246 (261)
.....|..++..|+|..|+..|++++........ ....++ ...+ +..-...++.|+|.|++++
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh
Confidence 3445677778888888888888888876432100 000000 0000 0111234666777777777
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
|+|++|+..+.+++
T Consensus 125 g~~~~A~~~~~~a~ 138 (275)
T 1xnf_A 125 GRDKLAQDDLLAFY 138 (275)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 77777777766654
No 154
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.52 E-value=0.0029 Score=53.27 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=51.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|.-+++.|+|..|+..|++|+.+-.. ...+++|+|.++.++|+|++|+....++|
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al 99 (281)
T 2c2l_A 40 YYTNRALCYLKMQQPEQALADCRRALELDGQ-----------------SVKAHFFLGQCQLEMESYDEAIANLQRAY 99 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456789999999999999999999986322 13689999999999999999999998886
No 155
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.52 E-value=0.004 Score=56.24 Aligned_cols=69 Identities=12% Similarity=-0.066 Sum_probs=53.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.+...-..++++|+|.+|+..|++++.........+ ....+..++|+|.+|..+|+|++|+..+.++|+
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~---------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI---------NIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT---------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc---------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 333444567788999999999999998755432211 233567999999999999999999999999873
No 156
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.48 E-value=0.005 Score=52.01 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=22.4
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
...|+.+++.|+|..|+..|++++....
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 265 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKTEP 265 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3457888889999999999999887653
No 157
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.46 E-value=0.0048 Score=53.00 Aligned_cols=78 Identities=13% Similarity=-0.064 Sum_probs=44.5
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHHH---HHHhhhhhhhHHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRDM---ALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~~---~~~l~~~~~~N~A~c~lK 245 (261)
......|..+++.|+|..|+..|++++........ .+..++ ...+ +..-...+++|++.|+.+
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTN 145 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc
Confidence 34556677777788888888888877765432100 000000 0000 011123467777777878
Q ss_pred hhCHHHHHHHHHhhc
Q 024876 246 LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 l~~~~~ai~~c~~aL 260 (261)
+|+|++|+..+.++|
T Consensus 146 ~g~~~~A~~~~~~al 160 (365)
T 4eqf_A 146 TSHQQDACEALKNWI 160 (365)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHH
Confidence 888887777777765
No 158
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.45 E-value=0.0036 Score=57.11 Aligned_cols=61 Identities=16% Similarity=0.029 Sum_probs=51.9
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..+++.|+|.+|+..|++|+.+-.. ...+++|+|.+|+++++|++|+....+||
T Consensus 41 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-----------------~~~~~~~lg~~~~~~g~~~eA~~~~~~al 101 (477)
T 1wao_1 41 IYYGNRSLAYLRTECYGYALGDATRAIELDKK-----------------YIKGYYRRAASNMALGKFRAALRDYETVV 101 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566789999999999999999999986321 13588999999999999999999999886
No 159
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.42 E-value=0.0054 Score=52.92 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=22.3
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
.+...|..+++.|+|..|+..|++++...
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 39 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVG 39 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcC
Confidence 34566788888888888888888888763
No 160
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.40 E-value=0.0078 Score=48.54 Aligned_cols=61 Identities=7% Similarity=-0.013 Sum_probs=49.8
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
...|..+++.|+|..|+..|++++...... .....++.+++.|+.++|++++|+.....++
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~--------------~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDT--------------QATRDALPLMENAYRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTS--------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCC--------------CccHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 456888999999999999999999875432 1123578999999999999999999887653
No 161
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.40 E-value=0.005 Score=50.22 Aligned_cols=77 Identities=10% Similarity=-0.114 Sum_probs=45.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHHHHHHh---hh--hhhhHHHHHHHHhh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRDMALAV---KN--PCHLNMAACLLKLK 247 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~~~~~l---~~--~~~~N~A~c~lKl~ 247 (261)
.....|..++..|+|..|+..|++++........ .+..++-...++.. .. ........+.+..+
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKL 158 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhc
Confidence 3455788889999999999999999986543210 00001101111111 00 11122334447789
Q ss_pred CHHHHHHHHHhhc
Q 024876 248 RYEEAIGQCSLVS 260 (261)
Q Consensus 248 ~~~~ai~~c~~aL 260 (261)
++.+|+..+.+++
T Consensus 159 ~~~~A~~~~~~~~ 171 (275)
T 1xnf_A 159 DEKQAKEVLKQHF 171 (275)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999988765
No 162
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=96.35 E-value=0.0045 Score=54.96 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=43.4
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------ccc-chhHHH------HHHHhhhhhhhHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQL-FGKYRD------MALAVKNPCHLNMAACLL 244 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~-~~~~~~------~~~~l~~~~~~N~A~c~l 244 (261)
..+...|..+++.|+|.+|+..|+++|.+-..... ... .++... ++..-...+++|++.|+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~ 177 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE 177 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 33555778888888899999999988876432100 000 000000 011112245666666666
Q ss_pred HhhCHHHHHHHHHhhc
Q 024876 245 KLKRYEEAIGQCSLVS 260 (261)
Q Consensus 245 Kl~~~~~ai~~c~~aL 260 (261)
++++|.+|+..+++||
T Consensus 178 ~~g~~~eAl~~~~kal 193 (382)
T 2h6f_A 178 WLRDPSQELEFIADIL 193 (382)
T ss_dssp HHTCCTTHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHH
Confidence 6666666666666665
No 163
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.33 E-value=0.007 Score=53.34 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=23.8
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
...|+.+++.|+|..|+..|++++....
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p 288 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEP 288 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 4458999999999999999999998643
No 164
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.30 E-value=0.0047 Score=51.20 Aligned_cols=72 Identities=8% Similarity=-0.075 Sum_probs=57.6
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
..+..+...|..++..|+|..|+..|++++.+........ ......++.++|.|+..+++|++|+..+.++
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHD---------HPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSS---------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCC---------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4556677889999999999999999999998764321000 1234578999999999999999999999888
Q ss_pred c
Q 024876 260 S 260 (261)
Q Consensus 260 L 260 (261)
|
T Consensus 96 l 96 (311)
T 3nf1_A 96 L 96 (311)
T ss_dssp H
T ss_pred H
Confidence 6
No 165
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=96.30 E-value=0.0038 Score=56.73 Aligned_cols=63 Identities=16% Similarity=0.005 Sum_probs=53.5
Q ss_pred hcccchhhHHhhhhhhH-HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKL-EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..++..|+| ..|+..|++|+.+-.. ...+++|+|.||+++++|++|+..+.+||
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-----------------LVEAWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34466779999999999 9999999999986332 13589999999999999999999999987
Q ss_pred C
Q 024876 261 K 261 (261)
Q Consensus 261 ~ 261 (261)
+
T Consensus 165 ~ 165 (474)
T 4abn_A 165 T 165 (474)
T ss_dssp T
T ss_pred h
Confidence 4
No 166
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=96.29 E-value=0.0029 Score=56.17 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=54.6
Q ss_pred ccchhhHHhhhhhh-HHHHHHHHHHHHHhhccccc-----------cccchhHHH------HHHHhhhhhhhHHHHHHHH
Q 024876 184 RRKMDGNALFKEEK-LEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRD------MALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~-~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~------~~~~l~~~~~~N~A~c~lK 245 (261)
....+|..+++.|+ |..|+..|++|+.+-..... ....++... ++..-...+++|++.|+.+
T Consensus 133 a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 133 VWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence 35567888889997 99999999999986533210 000111111 1222335679999999999
Q ss_pred hhCHHHHHHHHHhhcC
Q 024876 246 LKRYEEAIGQCSLVSK 261 (261)
Q Consensus 246 l~~~~~ai~~c~~aL~ 261 (261)
+|+|++|+..++++|+
T Consensus 213 ~g~~~eAl~~~~~al~ 228 (382)
T 2h6f_A 213 FKLWDNELQYVDQLLK 228 (382)
T ss_dssp HTCCTTHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHH
Confidence 9999999999999873
No 167
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.28 E-value=0.0053 Score=54.15 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=47.0
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHH---HHH---HHhhhhhhhHHHHHH
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYR---DMA---LAVKNPCHLNMAACL 243 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~---~~~---~~l~~~~~~N~A~c~ 243 (261)
.+......|+.+++.|+|..|+..|++++........ ....++-. .++ ..-...++++++.|+
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 104 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLL 104 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3455667788888889999999999888875322100 00000000 000 111234667777777
Q ss_pred HHhhCHHHHHHHHHhhc
Q 024876 244 LKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 244 lKl~~~~~ai~~c~~aL 260 (261)
.++|++++|+..+.+++
T Consensus 105 ~~~g~~~~A~~~~~~~~ 121 (450)
T 2y4t_A 105 LKQGKLDEAEDDFKKVL 121 (450)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 77777777777776665
No 168
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.27 E-value=0.0079 Score=50.27 Aligned_cols=61 Identities=13% Similarity=0.057 Sum_probs=52.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
.....|..+++.|+|..|+..|++++..... ...++.|+|.|+.++|++.+|+..+.++|+
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~-----------------~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 298 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIPQ-----------------NASTYSAIGYIHSLMGNFENAVDYFHTALG 298 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----------------CSHHHHHHHHHHHHHTCHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc-----------------chHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 4456788899999999999999999986432 136889999999999999999999999874
No 169
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.24 E-value=0.008 Score=45.48 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=21.4
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.++|.++.++|++++|+..+.+++
T Consensus 145 ~~~~~la~~~~~~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 145 KVHRAIAFSYEQMGRHEEALPHFKKAN 171 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 567788888888888888888877765
No 170
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.24 E-value=0.0071 Score=51.66 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=21.7
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
......|..+++.|+|..|+..|++++...
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 94 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQD 94 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 344567777888888888888888887653
No 171
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.23 E-value=0.0071 Score=50.11 Aligned_cols=68 Identities=16% Similarity=0.102 Sum_probs=53.7
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|++++.++....... ......++.++|.|++++|+|++|+..+.++|
T Consensus 155 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 155 QLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---------DPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 355668888999999999999999998864321111 12235689999999999999999999999886
No 172
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.22 E-value=0.0071 Score=51.93 Aligned_cols=28 Identities=11% Similarity=0.179 Sum_probs=20.8
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
....|..++..|+|..|+..|++++...
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~ 243 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVR 243 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 3455777778888888888888887754
No 173
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.007 Score=53.22 Aligned_cols=76 Identities=11% Similarity=0.035 Sum_probs=52.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.-++|..+++.|+|.+|+..|.++++........................++.|++..|.++|+|++|+....+++
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~ 82 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHST 82 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3456788999999999999999999876543111100000001122334678999999999999999999887765
No 174
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.19 E-value=0.0086 Score=51.63 Aligned_cols=66 Identities=14% Similarity=0.020 Sum_probs=42.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|+..|.+++.+...... ......+++|+|.+++.+|+|++|+..+.++|
T Consensus 189 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 254 (406)
T 3sf4_A 189 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERRAYSNLGNAYIFLGEFETASEYYKKTL 254 (406)
T ss_dssp HHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC-----------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 4566788899999999999999999987643210 11223355555555555555555555555543
No 175
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.18 E-value=0.011 Score=41.93 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=22.8
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.+++.++..+++|.+|+..+.+++
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~ 96 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKAL 96 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 467889999999999999998888765
No 176
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.16 E-value=0.012 Score=41.67 Aligned_cols=75 Identities=19% Similarity=0.185 Sum_probs=48.6
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHHHHH------HhhhhhhhHHHHHHHHhhC
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRDMAL------AVKNPCHLNMAACLLKLKR 248 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~~~~------~l~~~~~~N~A~c~lKl~~ 248 (261)
...|..++..|++..|+..|.+++........ ....++-...+. .-...++.+++.++.++++
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 118 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD 118 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc
Confidence 34577778888999999998888875432100 000011011111 1124568899999999999
Q ss_pred HHHHHHHHHhhc
Q 024876 249 YEEAIGQCSLVS 260 (261)
Q Consensus 249 ~~~ai~~c~~aL 260 (261)
+++|+....+++
T Consensus 119 ~~~A~~~~~~~~ 130 (136)
T 2fo7_A 119 YDEAIEYYQKAL 130 (136)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988875
No 177
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.16 E-value=0.0089 Score=45.86 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=52.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc------------cccc--hhHHHHH------HHhhhhhhhHHHHHH
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM------------FQLF--GKYRDMA------LAVKNPCHLNMAACL 243 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~------------~~~~--~~~~~~~------~~l~~~~~~N~A~c~ 243 (261)
.....|..++..|+|..|+..|.+++.+...... .... ++-...+ ..-...++.|+|.++
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 125 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDA 125 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4566788899999999999999999987543210 0110 1111111 112245788999999
Q ss_pred HHhhCHHHHHHHHHhhc
Q 024876 244 LKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 244 lKl~~~~~ai~~c~~aL 260 (261)
+++|+|++|+..+.++|
T Consensus 126 ~~~g~~~~A~~~~~~al 142 (177)
T 2e2e_A 126 FMQANYAQAIELWQKVM 142 (177)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHH
Confidence 99999999999888876
No 178
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.16 E-value=0.01 Score=46.58 Aligned_cols=27 Identities=15% Similarity=-0.004 Sum_probs=20.8
Q ss_pred hhhhHHHHHHHHh-hCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKL-KRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl-~~~~~ai~~c~~aL 260 (261)
.++.+++.|+..+ ++|++|+..+.+++
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKAL 104 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4667788888888 88888888777765
No 179
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.12 E-value=0.0095 Score=51.88 Aligned_cols=66 Identities=20% Similarity=0.099 Sum_probs=54.6
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...|..++..|+|..|+..|++++.+...... ......++.+++.++..+|+|.+|+..+.++|
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 153 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND-----------RLGEAKSSGNLGNTLKVMGRFDEAAICCERHL 153 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC-----------chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567789999999999999999999988643210 23446789999999999999999999999886
No 180
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.11 E-value=0.0079 Score=46.17 Aligned_cols=28 Identities=7% Similarity=0.064 Sum_probs=20.0
Q ss_pred cchhhHH-hhhhhhH--HHHHHHHHHHHHhh
Q 024876 185 RKMDGNA-LFKEEKL--EEAMQQYEMAIAYM 212 (261)
Q Consensus 185 ~K~~Gn~-~fk~~~~--~~A~~~Y~kal~~l 212 (261)
....|.. ++..|+| ..|+..|.+++...
T Consensus 81 ~~~la~~l~~~~~~~~~~~A~~~~~~al~~~ 111 (177)
T 2e2e_A 81 YAALATVLYYQASQHMTAQTRAMIDKALALD 111 (177)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHhC
Confidence 3445666 5677887 88888888888764
No 181
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.05 E-value=0.015 Score=43.87 Aligned_cols=27 Identities=22% Similarity=0.402 Sum_probs=22.8
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.++|.++.++++|++|+..+.+++
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~~~~~~~~ 137 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAIDSFKIAL 137 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 567888999999999999998888775
No 182
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.05 E-value=0.014 Score=47.12 Aligned_cols=27 Identities=19% Similarity=0.052 Sum_probs=18.3
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
...|..++..|+|..|+..|.+++...
T Consensus 75 ~~la~~~~~~~~~~~A~~~~~~a~~~~ 101 (252)
T 2ho1_A 75 AALAVVFQTEMEPKLADEEYRKALASD 101 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 345666677777777777777777653
No 183
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.02 E-value=0.012 Score=49.91 Aligned_cols=28 Identities=25% Similarity=0.156 Sum_probs=25.3
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..+++|+|.|++++|+|++|+....+||
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al 227 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEAL 227 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3578999999999999999999999886
No 184
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.00 E-value=0.012 Score=50.11 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=41.3
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHH---HH---HHHhhhhhhhHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYR---DM---ALAVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~---~~---~~~l~~~~~~N~A~c~lKl~ 247 (261)
....|..+++.|+|..|+..|++++........ .+..++-. .+ +..-...++.|++.|++++|
T Consensus 220 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 299 (368)
T 1fch_A 220 QCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLG 299 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 445677778888888888888888875432100 00000000 00 11112345666666666666
Q ss_pred CHHHHHHHHHhhc
Q 024876 248 RYEEAIGQCSLVS 260 (261)
Q Consensus 248 ~~~~ai~~c~~aL 260 (261)
+|.+|+..+.++|
T Consensus 300 ~~~~A~~~~~~al 312 (368)
T 1fch_A 300 AHREAVEHFLEAL 312 (368)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6666666666554
No 185
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.98 E-value=0.011 Score=49.05 Aligned_cols=68 Identities=18% Similarity=0.088 Sum_probs=55.1
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+..+...|..++..|+|..|+..|.+++.+...... ......++.+++.++..+|+|++|+..+.+++
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 110 (338)
T 3ro2_A 43 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD-----------QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHL 110 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccc-----------cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 344567799999999999999999999987643210 22345789999999999999999999998876
No 186
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.96 E-value=0.0091 Score=55.18 Aligned_cols=78 Identities=12% Similarity=-0.070 Sum_probs=46.5
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHH---H---HHHHhhhhhhhHHHHHHHH
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYR---D---MALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~---~---~~~~l~~~~~~N~A~c~lK 245 (261)
......|..++..|+|..|+..|++++.+-..... .+..++-. + ++..-...+++|+|.|+++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 103 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED 103 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 34556788888888999999999888876432100 00000000 0 0111123467777777777
Q ss_pred hhCHHHHHHHHHhhc
Q 024876 246 LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 l~~~~~ai~~c~~aL 260 (261)
+++|++|+..+.++|
T Consensus 104 ~g~~~~A~~~~~~al 118 (568)
T 2vsy_A 104 AGQAEAAAAAYTRAH 118 (568)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 777777777777765
No 187
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=95.95 E-value=0.014 Score=45.74 Aligned_cols=76 Identities=11% Similarity=-0.041 Sum_probs=46.8
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhcccc-----------cc-ccchhHHHHHHHh--------hhhhhhHHHHHHH
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDF-----------MF-QLFGKYRDMALAV--------KNPCHLNMAACLL 244 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-----------~~-~~~~~~~~~~~~l--------~~~~~~N~A~c~l 244 (261)
....|..++..|+|..|+..|.+++....... .. +..++-...++.. ...++.|++.|+.
T Consensus 45 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (225)
T 2vq2_A 45 WLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA 124 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH
Confidence 34456677777888888888887776543210 01 1111111111111 1357889999999
Q ss_pred HhhCHHHHHHHHHhhc
Q 024876 245 KLKRYEEAIGQCSLVS 260 (261)
Q Consensus 245 Kl~~~~~ai~~c~~aL 260 (261)
+++++++|+..+.+++
T Consensus 125 ~~~~~~~A~~~~~~~~ 140 (225)
T 2vq2_A 125 KQGQFGLAEAYLKRSL 140 (225)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 9999999999888875
No 188
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=95.95 E-value=0.011 Score=53.79 Aligned_cols=62 Identities=23% Similarity=0.170 Sum_probs=49.8
Q ss_pred cchhhHHhhhh--------hhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHH
Q 024876 185 RKMDGNALFKE--------EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQC 256 (261)
Q Consensus 185 ~K~~Gn~~fk~--------~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c 256 (261)
....|+.++.. |+|..|+..|++|+.+-.. ......+++|+|.||.++|+|++|+..+
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--------------~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 281 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK--------------ASSNPDLHLNRATLHKYEESYGEALEGF 281 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG--------------GGGCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC--------------cccCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34567788888 9999999999999986321 0012468999999999999999999999
Q ss_pred Hhhc
Q 024876 257 SLVS 260 (261)
Q Consensus 257 ~~aL 260 (261)
.+||
T Consensus 282 ~~al 285 (474)
T 4abn_A 282 SQAA 285 (474)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.95 E-value=0.012 Score=49.56 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=51.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|++..|+..|++++..-... ...+.|+|.+++.+|++++|+....+++
T Consensus 119 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~-----------------~~a~~~la~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 119 LXAQQAMQLMQESNYTDALPLLXDAWQLSNQN-----------------GEIGLLLAETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC-----------------HHHHHHHHHHHHHTTCHHHHHHHHTTSC
T ss_pred hHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc-----------------hhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 35678899999999999999999999864321 3589999999999999999999988875
No 190
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=95.94 E-value=0.016 Score=46.23 Aligned_cols=56 Identities=20% Similarity=0.187 Sum_probs=30.1
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
..|..++..|+|..|+..|++++...... ..++.+++.|++++++|++|+..+.++
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~A~~~~~~~ 151 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAGMEN-----------------GDLFYMLGTVLVKLEQPKLALPYLQRA 151 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTCCS-----------------HHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34555566666666666666666543221 123455555555555555555555544
No 191
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=95.93 E-value=0.013 Score=46.79 Aligned_cols=61 Identities=16% Similarity=0.080 Sum_probs=50.8
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..+++.|+|..|+..|++++..... ...++.++|.+++++++|++|+..+.+++
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 118 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSS-----------------AATAYYGAGNVYVVKEMYKEAKDMFEKAL 118 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-----------------chHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34556788899999999999999999976321 13678999999999999999999998876
No 192
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.92 E-value=0.01 Score=56.56 Aligned_cols=59 Identities=17% Similarity=0.074 Sum_probs=47.1
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|..|+..|++++..-..+ ..+++|++.+++++++|++|+..+.+||
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----------------~~a~~~lg~~~~~~g~~~~A~~~~~~al 494 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAERVGWR-----------------WRLVWYRAVAELLTGDYDSATKHFTEVL 494 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccCcch-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455888899999999999999999864321 3577888888888888888888888776
No 193
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.75 E-value=0.013 Score=54.09 Aligned_cols=76 Identities=9% Similarity=-0.058 Sum_probs=51.6
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHH---HH---HHHhhhhhhhHHHHHHHHh-
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYR---DM---ALAVKNPCHLNMAACLLKL- 246 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~---~~---~~~l~~~~~~N~A~c~lKl- 246 (261)
....|.-++..|+|.+|+..|++++..-..... ....++-. ++ +..-...++.|++.|+.++
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 139 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC 139 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Confidence 455678888889999999999999876433210 00001101 11 1112345789999999999
Q ss_pred --hCHHHHHHHHHhhc
Q 024876 247 --KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 --~~~~~ai~~c~~aL 260 (261)
+++++|+..+.++|
T Consensus 140 ~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 140 DWRALDVLSAQVRAAV 155 (568)
T ss_dssp CCTTHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHH
Confidence 99999999999886
No 194
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=95.73 E-value=0.022 Score=45.86 Aligned_cols=27 Identities=30% Similarity=0.308 Sum_probs=17.3
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.++|.++++++++++|+..+.+++
T Consensus 176 ~~~~~la~~~~~~g~~~~A~~~~~~~~ 202 (252)
T 2ho1_A 176 SVALEMADLLYKEREYVPARQYYDLFA 202 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345666666666666666666666554
No 195
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=95.70 E-value=0.02 Score=47.62 Aligned_cols=77 Identities=16% Similarity=-0.007 Sum_probs=46.6
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHH---H---HHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRD---M---ALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~---~---~~~l~~~~~~N~A~c~lKl 246 (261)
.....|..+++.|+|..|+..|++++........ ....++-.. + ...-...++.+++.|++++
T Consensus 174 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 174 LHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNM 253 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 3455677778888888888888888765432100 000000000 1 0111235678888888888
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
|+|++|+..+.+++
T Consensus 254 g~~~~A~~~~~~a~ 267 (327)
T 3cv0_A 254 SQYDLAAKQLVRAI 267 (327)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 88888888887775
No 196
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=95.65 E-value=0.023 Score=47.28 Aligned_cols=79 Identities=13% Similarity=0.022 Sum_probs=43.0
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchh---HHHH---HHHhhhhhhhHHHHHHH
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGK---YRDM---ALAVKNPCHLNMAACLL 244 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~---~~~~---~~~l~~~~~~N~A~c~l 244 (261)
+...-..|..++..|+|..|+..|++++........ ....++ ..++ +..-...++.++|.|+.
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 100 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 100 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHH
Confidence 344456666777777777777777777654321100 000000 0000 01112346777888888
Q ss_pred HhhCHHHHHHHHHhhc
Q 024876 245 KLKRYEEAIGQCSLVS 260 (261)
Q Consensus 245 Kl~~~~~ai~~c~~aL 260 (261)
++++|.+|+..+.+++
T Consensus 101 ~~~~~~~A~~~~~~~~ 116 (327)
T 3cv0_A 101 NEHNANAALASLRAWL 116 (327)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 8888888887777765
No 197
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=95.54 E-value=0.028 Score=46.84 Aligned_cols=76 Identities=11% Similarity=-0.039 Sum_probs=40.2
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHHHHH------HhhhhhhhHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRDMAL------AVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~~~~------~l~~~~~~N~A~c~lKl~ 247 (261)
....|..++..|+|..|+..|++++........ ....++-...++ .....++.+++.++++++
T Consensus 128 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 128 WIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 445567777777888888888777776432100 000000000000 111245566666666666
Q ss_pred CHHHHHHHHHhhc
Q 024876 248 RYEEAIGQCSLVS 260 (261)
Q Consensus 248 ~~~~ai~~c~~aL 260 (261)
+|++|+..+.+++
T Consensus 208 ~~~~A~~~~~~a~ 220 (330)
T 3hym_B 208 EWKTAEKWFLDAL 220 (330)
T ss_dssp CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 6666666666654
No 198
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=95.47 E-value=0.016 Score=50.20 Aligned_cols=77 Identities=18% Similarity=0.043 Sum_probs=46.3
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHHH------HHHhhhhhhhHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRDM------ALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~~------~~~l~~~~~~N~A~c~lKl 246 (261)
.....|+.+++.|+|..|+..|++++..-..... .+..++-... +..-....+.+++.++..+
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 148 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKAL 148 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 4567788999999999999999999986432100 0000000000 1111233566777777777
Q ss_pred hCHHHHHHHHHhhc
Q 024876 247 KRYEEAIGQCSLVS 260 (261)
Q Consensus 247 ~~~~~ai~~c~~aL 260 (261)
|+|++|+....+++
T Consensus 149 g~~~~A~~~~~~al 162 (388)
T 1w3b_A 149 GRLEEAKACYLKAI 162 (388)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 77777777766654
No 199
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=95.36 E-value=0.028 Score=48.59 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=13.5
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHh
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
..|..+++.|++..|+..|++++..
T Consensus 242 ~l~~~~~~~g~~~~A~~~~~~al~~ 266 (388)
T 1w3b_A 242 NLACVYYEQGLIDLAIDTYRRAIEL 266 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3455555555555555555555543
No 200
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.09 E-value=0.037 Score=42.58 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=26.7
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
..|+.|+|..|+|+++|..|+.+|+.+|+
T Consensus 71 rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 71 RDYVFYLAVGNYRLKEYEKALKYVRGLLQ 99 (152)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 46899999999999999999999999874
No 201
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.07 E-value=0.0091 Score=56.90 Aligned_cols=76 Identities=8% Similarity=-0.017 Sum_probs=55.1
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccc--------------cccchhHHHH---HHHhhhhhhhHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM--------------FQLFGKYRDM---ALAVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~--------------~~~~~~~~~~---~~~l~~~~~~N~A~c~lKl~ 247 (261)
....|..+++.|+|.+|+..|++|+.+-..... .+. ...-++ +..-...+++|+|.|++++|
T Consensus 470 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 470 VWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 445688899999999999999999987543210 111 111111 22234567999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 024876 248 RYEEAIGQCSLVSK 261 (261)
Q Consensus 248 ~~~~ai~~c~~aL~ 261 (261)
+|++|+..+++||+
T Consensus 549 ~~~~A~~~~~~al~ 562 (681)
T 2pzi_A 549 DRVGAVRTLDEVPP 562 (681)
T ss_dssp CHHHHHHHHHTSCT
T ss_pred CHHHHHHHHHhhcc
Confidence 99999999999874
No 202
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.046 Score=48.68 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=50.9
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..+++.|+|..|+..|++++..-.. ...++++++.|++++|+|++|+....+++
T Consensus 41 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 100 (514)
T 2gw1_A 41 FYSNLSACYVSVGDLKKVVEMSTKALELKPD-----------------YSKVLLRRASANEGLGKFADAMFDLSVLS 100 (514)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSC-----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHhccChH-----------------HHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4556789999999999999999999986322 13688999999999999999999988875
No 203
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.87 E-value=0.032 Score=42.86 Aligned_cols=61 Identities=8% Similarity=-0.124 Sum_probs=49.1
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|..|+..|+++++.-... .....+.|++.++..+|++++|+..+.++|
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLGA---------------QDGEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT---------------TTTHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCccc---------------ChHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 4556888899999999999999999763210 012478899999999999999999999886
No 204
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=94.86 E-value=0.057 Score=46.43 Aligned_cols=66 Identities=8% Similarity=-0.037 Sum_probs=51.3
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|..++..|+|..|...|.+++.+...... ......+++|++.+++.+|+|.+|+..+.++|
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al 120 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV-----------WHYALWSLIQQSEILFAQGFLQTAWETQEKAF 120 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3455678888899999999999999987543100 12235678999999999999999999999886
No 205
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.72 E-value=0.048 Score=47.75 Aligned_cols=66 Identities=6% Similarity=-0.021 Sum_probs=53.7
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.....|+-++..|+|..|+..|++++..+..... +...+.+++|++.+|+.+++|.+|....++++
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDD-----------KPSLVDVHLLESKVYHKLRNLAKSKASLTAAR 202 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC-----------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc-----------chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3456789999999999999999999987654211 12346789999999999999999999988775
No 206
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=94.67 E-value=0.031 Score=43.31 Aligned_cols=51 Identities=18% Similarity=0.079 Sum_probs=42.1
Q ss_pred hhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCH----------HHHHHHHHhhcC
Q 024876 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY----------EEAIGQCSLVSK 261 (261)
Q Consensus 194 k~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~----------~~ai~~c~~aL~ 261 (261)
+-+.|..|+..|++++.+-.. ....++|++.|++.++++ ++|+..+.+||+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-----------------~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ 74 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-----------------DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-----------------CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH
Confidence 557899999999999986432 135899999999999876 599999999873
No 207
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.60 E-value=0.033 Score=38.27 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=32.1
Q ss_pred HhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 178 ~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
.+..|..+-.++.+.=+.|+|.+|+.+|..|+.+|-.
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 5667777888888889999999999999999998854
No 208
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=94.58 E-value=0.017 Score=40.08 Aligned_cols=62 Identities=11% Similarity=0.128 Sum_probs=47.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHH
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQC 256 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c 256 (261)
.....|..+++.|+|..|+..|++++.+..... . ......++.+++.|+..++++..|+...
T Consensus 40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 40 GYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE------H-----VAIRSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT------S-----HHHHHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc------H-----HHHHHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 355678999999999999999999998643210 0 1224568899999999999887776543
No 209
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.57 E-value=0.058 Score=38.05 Aligned_cols=44 Identities=9% Similarity=0.137 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 200 EAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 200 ~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.|+..|++++..-... ..++.|+|.+++.+++|++|+..+.++|
T Consensus 3 ~a~~~~~~al~~~p~~-----------------~~~~~~lg~~~~~~g~~~~A~~~~~~al 46 (115)
T 2kat_A 3 AITERLEAMLAQGTDN-----------------MLLRFTLGKTYAEHEQFDAALPHLRAAL 46 (115)
T ss_dssp CHHHHHHHHHTTTCCC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCc-----------------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 5788899998753321 2588999999999999999999999886
No 210
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=94.44 E-value=0.06 Score=48.37 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=46.1
Q ss_pred hHHhhhh----------hhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 189 GNALFKE----------EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 189 Gn~~fk~----------~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
|..++.. |+|..|+..|++++...... ..++.+++.|+.++|++.+|+..+.+
T Consensus 425 a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-----------------~~~~~~l~~~~~~~g~~~~A~~~~~~ 487 (537)
T 3fp2_A 425 ATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRS-----------------EQAKIGLAQLKLQMEKIDEAIELFED 487 (537)
T ss_dssp HHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 5666666 99999999999999864321 25789999999999999999999998
Q ss_pred hc
Q 024876 259 VS 260 (261)
Q Consensus 259 aL 260 (261)
++
T Consensus 488 al 489 (537)
T 3fp2_A 488 SA 489 (537)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 211
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.35 E-value=0.058 Score=44.21 Aligned_cols=76 Identities=13% Similarity=0.074 Sum_probs=44.0
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccc--------cc-----cccchh----HHHHHHHhhhhhhhHHHHHHHH--
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDD--------FM-----FQLFGK----YRDMALAVKNPCHLNMAACLLK-- 245 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~--------~~-----~~~~~~----~~~~~~~l~~~~~~N~A~c~lK-- 245 (261)
....|..++..++|..|+..|++++..-... .. ....++ -.+.+..-....+.|++.++..
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~ 88 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQ 88 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCC
Confidence 4456788888888888888888887621100 00 000000 0001111134567777888887
Q ss_pred --hhCHHHHHHHHHhhc
Q 024876 246 --LKRYEEAIGQCSLVS 260 (261)
Q Consensus 246 --l~~~~~ai~~c~~aL 260 (261)
.+++.+|+....+++
T Consensus 89 ~~~~~~~~A~~~~~~a~ 105 (273)
T 1ouv_A 89 GVSQNTNKALQYYSKAC 105 (273)
T ss_dssp SSCCCHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHH
Confidence 788888887777765
No 212
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=94.25 E-value=0.062 Score=49.09 Aligned_cols=61 Identities=18% Similarity=0.088 Sum_probs=51.4
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
......|..+++.|++..|+..|++++..-... ..++.+++.+|.++|+|++|+....++|
T Consensus 517 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~-----------------~~~~~~l~~~~~~~g~~~~A~~~~~~~l 577 (597)
T 2xpi_A 517 ATWANLGHAYRKLKMYDAAIDALNQGLLLSTND-----------------ANVHTAIALVYLHKKIPGLAITHLHESL 577 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----------------hHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 345567888899999999999999999863211 3688999999999999999999999886
No 213
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=94.22 E-value=0.071 Score=45.80 Aligned_cols=67 Identities=19% Similarity=0.127 Sum_probs=41.8
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|..++..|+|..|+..|++++........... .....++.|++.++..+|+|++|+..+.++|
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 162 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL---------PMHEFLVRIRAQLLWAWARLDEAEASARSGI 162 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC---------cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 345688889999999999999999987642110000 0122345556666666666666655555543
No 214
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.73 E-value=0.08 Score=43.36 Aligned_cols=76 Identities=13% Similarity=0.057 Sum_probs=50.6
Q ss_pred cchhhHHhhh----hhhHHHHHHHHHHHHHhhcccc--------c-----cccchh----HHHHHHHhhhhhhhHHHHHH
Q 024876 185 RKMDGNALFK----EEKLEEAMQQYEMAIAYMGDDF--------M-----FQLFGK----YRDMALAVKNPCHLNMAACL 243 (261)
Q Consensus 185 ~K~~Gn~~fk----~~~~~~A~~~Y~kal~~l~~~~--------~-----~~~~~~----~~~~~~~l~~~~~~N~A~c~ 243 (261)
....|..++. .+++..|+..|++++..-.... . ....++ -...+..-...+++|++.++
T Consensus 41 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~ 120 (273)
T 1ouv_A 41 CFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIY 120 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHH
Confidence 4456777788 8999999999999887531100 0 000010 01112222346789999999
Q ss_pred HH----hhCHHHHHHHHHhhc
Q 024876 244 LK----LKRYEEAIGQCSLVS 260 (261)
Q Consensus 244 lK----l~~~~~ai~~c~~aL 260 (261)
.+ .+++++|+..+.+|+
T Consensus 121 ~~~~~~~~~~~~A~~~~~~a~ 141 (273)
T 1ouv_A 121 HDGKVVTRDFKKAVEYFTKAC 141 (273)
T ss_dssp HHCSSSCCCHHHHHHHHHHHH
T ss_pred HcCCCcccCHHHHHHHHHHHH
Confidence 99 999999999999886
No 215
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=93.68 E-value=0.083 Score=38.70 Aligned_cols=44 Identities=25% Similarity=0.239 Sum_probs=35.6
Q ss_pred CCCchh-hHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 171 SDMTVE-ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 171 ~~l~~e-e~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
..|+.. ..+..|..+-.++...=+.++|..|+.+|..|+.+|-.
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 345544 56777777888888888999999999999999998754
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.68 E-value=0.033 Score=50.44 Aligned_cols=51 Identities=18% Similarity=0.269 Sum_probs=29.8
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
.....|+.+|..|+|..|...|.++ .-+.++|.|+.++|+|++|+..+.+|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-------------------------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-------------------------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp -------------CTTTHHHHHHHT-------------------------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-------------------------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 6778899999999999999999866 25667778888888888877777665
No 217
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.35 E-value=0.21 Score=34.63 Aligned_cols=59 Identities=19% Similarity=0.144 Sum_probs=44.7
Q ss_pred chhhHHhhhhhh---HHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 186 KMDGNALFKEEK---LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 186 K~~Gn~~fk~~~---~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
-..|..+|-.++ ...|...+++|+.+-..+ ...++.++..+++.|+|.+|+....++|+
T Consensus 10 ~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~-----------------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 10 AAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN-----------------EAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345666654444 689999999999863321 35677789999999999999999888774
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=93.21 E-value=0.079 Score=39.32 Aligned_cols=30 Identities=20% Similarity=0.239 Sum_probs=26.8
Q ss_pred hhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 232 KNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 232 ~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
+--|+..+|..++|+|+|..|+.+|+..|+
T Consensus 73 ~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 73 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 346899999999999999999999998873
No 219
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=92.78 E-value=0.19 Score=45.86 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=14.3
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHh
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
.|..+++.|++..|+..|.+++..
T Consensus 379 l~~~~~~~g~~~~A~~~~~~~~~~ 402 (597)
T 2xpi_A 379 VGIYYLCVNKISEARRYFSKSSTM 402 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh
Confidence 355556666666666666666553
No 220
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=92.59 E-value=0.19 Score=44.34 Aligned_cols=62 Identities=16% Similarity=0.053 Sum_probs=45.6
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHH-HHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAA-CLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~-c~lKl~~~~~ai~~c~~aL 260 (261)
....|+.++..|+|.+|+..|++++..-.. .. ....++++++. ++.+++++++|+.++.+||
T Consensus 337 ~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~-------~~-------~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 337 CSILASLHALADQYEEAEYYFQKEFSKELT-------PV-------AKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCCC-------HH-------HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccHHHHHHHHHHHHhcCCC-------Ch-------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 446789999999999999999999975221 11 11235566654 4567899999999999886
No 221
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=92.56 E-value=0.19 Score=37.20 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=38.2
Q ss_pred hhhHHhhh----hhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH----hhCHHHHHHHHHh
Q 024876 187 MDGNALFK----EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAIGQCSL 258 (261)
Q Consensus 187 ~~Gn~~fk----~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK----l~~~~~ai~~c~~ 258 (261)
..|.-++. .+++.+|+..|++|...- ....+.|++.+|.. .+++.+|+....+
T Consensus 62 ~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g-------------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~ 122 (138)
T 1klx_A 62 FLGDFYENGKYVKKDLRKAAQYYSKACGLN-------------------DQDGCLILGYKQYAGKGVVKNEKQAVKTFEK 122 (138)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHcCC-------------------CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHH
Confidence 34444444 566666666666666431 13578899999999 8999999998887
Q ss_pred hc
Q 024876 259 VS 260 (261)
Q Consensus 259 aL 260 (261)
|.
T Consensus 123 Aa 124 (138)
T 1klx_A 123 AC 124 (138)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 222
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=92.50 E-value=0.16 Score=42.46 Aligned_cols=76 Identities=13% Similarity=-0.081 Sum_probs=51.5
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccc-----------cccchhHHHH------HHHhhhhhhhHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM-----------FQLFGKYRDM------ALAVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~-----------~~~~~~~~~~------~~~l~~~~~~N~A~c~lKl~ 247 (261)
....|.-+...|++..|+..|++++..-..... .....+.... ...-...+++|+|.+++.+|
T Consensus 154 ~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g 233 (287)
T 3qou_A 154 GLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVG 233 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 445699999999999999999998764321000 0000000111 11223467999999999999
Q ss_pred CHHHHHHHHHhhc
Q 024876 248 RYEEAIGQCSLVS 260 (261)
Q Consensus 248 ~~~~ai~~c~~aL 260 (261)
++++|+....++|
T Consensus 234 ~~~~A~~~l~~~l 246 (287)
T 3qou_A 234 RNEEALELLFGHL 246 (287)
T ss_dssp CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999998876
No 223
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.49 E-value=0.2 Score=42.11 Aligned_cols=56 Identities=13% Similarity=0.032 Sum_probs=34.7
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHH-HHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEA-IGQCSLVS 260 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~a-i~~c~~aL 260 (261)
.|.-+++.|+|..|...|++++..-. -....++|++.++..+|++.++ ....++++
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p-----------------~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDS-----------------GHPETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34444455555555555555554321 1234789999999999999875 45656654
No 224
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=92.48 E-value=0.096 Score=35.89 Aligned_cols=43 Identities=23% Similarity=0.242 Sum_probs=35.3
Q ss_pred CCch-hhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 172 DMTV-EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 172 ~l~~-ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
.|++ ...++.|..+-.+|.+.=+.|+|.+|+.+|..|+.+|..
T Consensus 8 ~~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 8 HMSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3443 346788888888999999999999999999999998854
No 225
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=92.38 E-value=0.26 Score=41.42 Aligned_cols=57 Identities=9% Similarity=-0.053 Sum_probs=38.6
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhh-hhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNP-CHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~-~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..|+-+.+.|++..|...|++++.+-... .. +++|++.++.+++++++|+....+|+
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 161 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDID-----------------PTLVYIQYMKFARRAEGIKSGRMIFKKAR 161 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSC-----------------THHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccC-----------------ccHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34555566778888888888888742211 11 67777777777777777777777765
No 226
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=92.32 E-value=0.12 Score=41.09 Aligned_cols=80 Identities=13% Similarity=0.025 Sum_probs=52.3
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHHhhccc--------cccc-cchhHH-------HHHHHhhhhhhhHHHHHHHH
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDD--------FMFQ-LFGKYR-------DMALAVKNPCHLNMAACLLK 245 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~--------~~~~-~~~~~~-------~~~~~l~~~~~~N~A~c~lK 245 (261)
+......|..++..+++.+|+..|++|+..-... .... ...+.. ..++.-....++|++.+|+.
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 3456677888899999999999999998642110 0011 000111 12233344567888999888
Q ss_pred ----hhCHHHHHHHHHhhcC
Q 024876 246 ----LKRYEEAIGQCSLVSK 261 (261)
Q Consensus 246 ----l~~~~~ai~~c~~aL~ 261 (261)
.+++.+|+....+|++
T Consensus 98 g~g~~~d~~~A~~~~~~A~~ 117 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAAR 117 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTS
T ss_pred CCCCccCHHHHHHHHHHHHH
Confidence 8889999988888763
No 227
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=92.26 E-value=0.21 Score=32.85 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=36.2
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~ 247 (261)
....|..+++.|+|..|+..|++++...... ...+.|++.++.++|
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-----------------~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----------------AEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-----------------HHHHHHHHHHHHhcC
Confidence 4567888999999999999999999863221 256788999888764
No 228
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=91.83 E-value=0.2 Score=34.56 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=26.6
Q ss_pred hhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 181 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
.+..+-.++...=+.|+|..|+.+|..|+.+|-.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3444555667777899999999999999998754
No 229
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.17 E-value=0.24 Score=50.95 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=43.5
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+...|+.+|..|+|..|+..|.+|- -|..+|.|+.++|+|+.|+..+.+|.
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-------------------------ny~rLA~tLvkLge~q~AIEaarKA~ 1248 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-------------------------NFGRLASTLVHLGEYQAAVDGARKAN 1248 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-------------------------HHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 34468999999999999999999863 46678899999999999999888774
No 230
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=91.05 E-value=0.29 Score=41.47 Aligned_cols=27 Identities=15% Similarity=0.104 Sum_probs=19.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
.-..|..+|+.++|..|+..|++++.+
T Consensus 138 ~~~~a~l~~~~~r~~dA~~~l~~a~~~ 164 (282)
T 4f3v_A 138 AWMKAVVYGAAERWTDVIDQVKSAGKW 164 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhhcc
Confidence 345667788888888888888766553
No 231
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=90.91 E-value=0.23 Score=33.98 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=30.5
Q ss_pred hHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 177 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 177 e~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
..+..+..+-.++...=+.|+|..|+.+|..|+.+|-.
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34556666667777777899999999999999998754
No 232
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=90.25 E-value=0.84 Score=35.41 Aligned_cols=69 Identities=9% Similarity=0.002 Sum_probs=55.0
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+.+....+|..+.|..|+..+..++.+.+.+...- + -.++...+..+|..++..++|..|...+.+||
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~-s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qAL 90 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELF-S-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMAL 90 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSS-C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccc-c-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 456677888999999999999999998865431110 0 24456788999999999999999999999987
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=89.99 E-value=0.48 Score=45.70 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=45.5
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHH
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~ 257 (261)
-.++.-+.++|+|+.|+..-++|+.+....+ .++.+||.||+++++|+.|+-.-|
T Consensus 341 ~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF-----------------~tW~~La~vYi~l~d~e~ALLtLN 395 (754)
T 4gns_B 341 NIQTNFLLNRGDYELALGVSNTSTELALDSF-----------------ESWYNLARCHIKKEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH-----------------HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHhcCchhh-----------------HHHHHHHHHHHHhccHHHHHHHHh
Confidence 3345556789999999999999999876532 588999999999999999997654
No 234
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=89.91 E-value=0.4 Score=33.48 Aligned_cols=64 Identities=16% Similarity=0.022 Sum_probs=41.0
Q ss_pred HhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHH
Q 024876 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC 242 (261)
Q Consensus 178 ~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c 242 (261)
.+..|..+-.++..+=+.|+|..|+.+|..|+.+|-...... .+......-.-++.-|+++|-.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e-~~~~~k~~l~~K~~eYl~RAE~ 74 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGT-KESSKRCVLRTKISGYMDRAEN 74 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777888889999999999999999875431111 1222233333444556666544
No 235
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=89.64 E-value=0.23 Score=34.25 Aligned_cols=28 Identities=14% Similarity=0.017 Sum_probs=25.8
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..++.|+|.|++++|+|++|+..+.++|
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al 34 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELV 34 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3578999999999999999999999986
No 236
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=89.63 E-value=0.5 Score=34.83 Aligned_cols=54 Identities=9% Similarity=-0.117 Sum_probs=43.1
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH----hhCHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAIGQCSLVS 260 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK----l~~~~~ai~~c~~aL 260 (261)
.|.-++..+.+.+|+..|++|...- ....++|++.+|.. .+++.+|+....+|.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g-------------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa 88 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN-------------------SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKAC 88 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC-------------------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Confidence 6666677777778888888888641 13688999999999 899999999888774
No 237
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=89.24 E-value=0.58 Score=39.61 Aligned_cols=62 Identities=13% Similarity=-0.022 Sum_probs=47.4
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.-..|.-+-..|+|..|+..|.+++.--. . + .......+|+++|+.++|+.++|+...++++
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~~-~-P------------~~~~da~~~~glaL~~lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSPA-G-E------------ACARAIAWYLAMARRSQGNESAAVALLEWLQ 235 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSTT-T-T------------TTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCC-C-c------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34457788889999999999999984210 0 0 0023578999999999999999999888775
No 238
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=89.04 E-value=0.67 Score=38.77 Aligned_cols=27 Identities=15% Similarity=-0.029 Sum_probs=19.0
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+++|++..+.++|++++|+....+||
T Consensus 204 ~~~~~~~~~~~~~g~~~~A~~~~~~al 230 (308)
T 2ond_A 204 EYVLAYIDYLSHLNEDNNTRVLFERVL 230 (308)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456777777777777777777766664
No 239
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=89.01 E-value=0.47 Score=37.52 Aligned_cols=28 Identities=7% Similarity=-0.142 Sum_probs=25.7
Q ss_pred hhhhhHHHHHHHH----hhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLK----LKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lK----l~~~~~ai~~c~~aL 260 (261)
...++|++.+|.. .+++.+|+....+|+
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 156 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSS 156 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 5789999999999 899999999998876
No 240
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=87.68 E-value=0.46 Score=35.48 Aligned_cols=30 Identities=17% Similarity=0.216 Sum_probs=27.0
Q ss_pred hhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 232 KNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 232 ~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
+--|+.-+|..+.|+|+|..|+..|+..|+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 346889999999999999999999998874
No 241
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=86.88 E-value=0.35 Score=36.59 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=26.2
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
--|+..+|..+.|+++|..|..+|+..|+
T Consensus 77 RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 77 RECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 45889999999999999999999998873
No 242
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=86.39 E-value=0.81 Score=40.98 Aligned_cols=28 Identities=11% Similarity=0.143 Sum_probs=23.3
Q ss_pred hhhhhHHHHHHHH----hhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLK----LKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lK----l~~~~~ai~~c~~aL 260 (261)
...+.|++.+|.+ .+++.+|+..+.+|+
T Consensus 399 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 430 (490)
T 2xm6_A 399 SAAQVQLGEIYYYGLGVERDYVQAWAWFDTAS 430 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 4577889999998 889999998888775
No 243
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.29 E-value=0.65 Score=41.58 Aligned_cols=63 Identities=10% Similarity=-0.078 Sum_probs=52.1
Q ss_pred cccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 183 ~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
......|..+++.|+|..|++.|.++..++... ..++.++++...+++..++|..|....+++
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~--------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka 194 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST--------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAV 194 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC--------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh--------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 346678999999999999999999998876432 234678888999999999999999888776
No 244
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=83.59 E-value=0.47 Score=42.47 Aligned_cols=73 Identities=15% Similarity=0.003 Sum_probs=41.3
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccc---------cccc---hh----HHHHHHHhhhhhhhHHHHHHHHhh---
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFM---------FQLF---GK----YRDMALAVKNPCHLNMAACLLKLK--- 247 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~---------~~~~---~~----~~~~~~~l~~~~~~N~A~c~lKl~--- 247 (261)
..|+.++++|+|..|+..|++++..-...-. .... ++ -+..+.. ....+.|++.++...+
T Consensus 8 ~la~~~~~~g~~~~A~~~~~~aa~~g~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-~~~A~~~Lg~~~~~~~~~~ 86 (452)
T 3e4b_A 8 RLANEALKRGDTVTAQQNYQQLAELGYSEAQVGLADIQVGTRDPAQIKQAEATYRAAADT-SPRAQARLGRLLAAKPGAT 86 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCTGGGTCC-----------------------------CHHHHHHHHHTC--CC
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC-CHHHHHHHHHHHHhCCCCC
Confidence 3688899999999999999999865221100 0000 00 0011222 4556778888555554
Q ss_pred --CHHHHHHHHHhhc
Q 024876 248 --RYEEAIGQCSLVS 260 (261)
Q Consensus 248 --~~~~ai~~c~~aL 260 (261)
++.+|+....+|+
T Consensus 87 ~~~~~~A~~~~~~Aa 101 (452)
T 3e4b_A 87 EAEHHEAESLLKKAF 101 (452)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHH
Confidence 7788888777765
No 245
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.58 E-value=3.5 Score=29.80 Aligned_cols=58 Identities=16% Similarity=0.111 Sum_probs=44.3
Q ss_pred hhhhHHHHHHHHHHHHHhhccc--cc---cccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHH
Q 024876 194 KEEKLEEAMQQYEMAIAYMGDD--FM---FQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEE 251 (261)
Q Consensus 194 k~~~~~~A~~~Y~kal~~l~~~--~~---~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ 251 (261)
..|+-..|+.+|+++|..|..- .+ .+...+.|++.+.|..+...||..+.-.|+....
T Consensus 34 E~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 34 ELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3577788889999988887542 11 1244678999999999999999999988875443
No 246
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.17 E-value=0.73 Score=31.78 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=25.5
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
...-.|+.+|+.|+|..|+..|++++....
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 345569999999999999999999997643
No 247
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.87 E-value=0.99 Score=46.57 Aligned_cols=25 Identities=8% Similarity=0.117 Sum_probs=14.4
Q ss_pred hhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 235 CHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 235 ~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
.|.+++.|+.++|+|++|+.....|
T Consensus 1136 ay~eVa~~~~~lGkyEEAIeyL~mA 1160 (1630)
T 1xi4_A 1136 SYMEVVQAANTSGNWEELVKYLQMA 1160 (1630)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4555666666666666666655443
No 248
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=81.93 E-value=3.2 Score=28.53 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=29.6
Q ss_pred hhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 180 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
..+..+-.+|..+|+.+||..|+..++++...-+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 5667778899999999999999999999997644
No 249
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=81.00 E-value=1.2 Score=30.88 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=30.8
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
+..|...--++..+.+.|+|..||.++++|..+|..
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 455666777788899999999999999999999865
No 250
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=80.97 E-value=2 Score=38.75 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=18.5
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHh
Q 024876 189 GNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 189 Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
|.-+.+.|++.+|...|++++..
T Consensus 328 ~~~~~~~g~~~~A~~~~~~al~~ 350 (530)
T 2ooe_A 328 ADYEESRMKYEKVHSIYNRLLAI 350 (530)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCHHHHHHHHHHHhCc
Confidence 45556788999999999999975
No 251
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=80.51 E-value=2.1 Score=28.53 Aligned_cols=30 Identities=27% Similarity=0.274 Sum_probs=25.6
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
.....|..+++.|+|..|+..|++++.+-.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 445678899999999999999999998743
No 252
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=80.20 E-value=2.4 Score=39.26 Aligned_cols=15 Identities=7% Similarity=0.087 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhh
Q 024876 198 LEEAMQQYEMAIAYM 212 (261)
Q Consensus 198 ~~~A~~~Y~kal~~l 212 (261)
|.+|+..|.+++..-
T Consensus 89 ~~~eL~~~~~~l~~~ 103 (567)
T 1dce_A 89 VKAELGFLESCLRVN 103 (567)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 888888888888654
No 253
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=79.94 E-value=2.1 Score=38.18 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=12.9
Q ss_pred hhHHhhh----hhhHHHHHHHHHHHHH
Q 024876 188 DGNALFK----EEKLEEAMQQYEMAIA 210 (261)
Q Consensus 188 ~Gn~~fk----~~~~~~A~~~Y~kal~ 210 (261)
.|.-++. .+++.+|+..|++|+.
T Consensus 81 Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 107 (490)
T 2xm6_A 81 LGLRYMNGEGVPQDYAQAVIWYKKAAL 107 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 3444444 5566666666666554
No 254
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=79.26 E-value=7 Score=34.21 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=58.2
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccc-----cchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ-----LFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~-----~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
.+-..|......++...|...|.+|+.+..-.+..+ .....+..+..+++.+..-++.+++.+|++.+|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 333445555667888999999999998874332222 223557788999999999999999999999999998877
Q ss_pred hc
Q 024876 259 VS 260 (261)
Q Consensus 259 aL 260 (261)
++
T Consensus 197 ~~ 198 (388)
T 2ff4_A 197 LT 198 (388)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 255
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=77.82 E-value=2.9 Score=37.65 Aligned_cols=28 Identities=14% Similarity=-0.039 Sum_probs=22.3
Q ss_pred hhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 233 NPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 233 ~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..++++++..+.++|++.+|.....+||
T Consensus 425 ~~~~~~~~~~~~~~g~~~~Ar~~~~~al 452 (530)
T 2ooe_A 425 PEYVLAYIDYLSHLNEDNNTRVLFERVL 452 (530)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHhhHHHHHHHHH
Confidence 4567888888888888888888877765
No 256
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=77.63 E-value=2.9 Score=40.87 Aligned_cols=64 Identities=16% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCCCCCEEEEEEEEEEeCCCeEEec--C-------------------------cCCCcCcEEecCCccchhHHHHHHhhc
Q 024876 66 KPSKYSTCFLHYRAWAESTRHKFDD--T-------------------------WLEQQPLEMVLGKEKKEMTGLAIGVSS 118 (261)
Q Consensus 66 ~p~~g~~V~v~y~~~~~~~g~~~~s--t-------------------------~~~~~~~~~~lG~~~~~i~gle~~l~~ 118 (261)
.+..|+.|.|.|+..+..+|..-.. + ......+.|.+|.+ .+.+-++..|..
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g-~~~~~le~vV~q 638 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTG-SMNPHIESEVTQ 638 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTT-CBCHHHHHHHTT
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcC-Cccchhhheeee
Confidence 5689999999999998765432111 0 01134789999999 899999999999
Q ss_pred CCCCcEEEEEEe
Q 024876 119 MKAGEHALLHVG 130 (261)
Q Consensus 119 Mk~Ge~~~~~i~ 130 (261)
|..|+...|...
T Consensus 639 ms~gqT~~F~~~ 650 (950)
T 3htx_A 639 MTVGEYASFKMT 650 (950)
T ss_dssp CCTTCEEEEEES
T ss_pred ccccceeEEecc
Confidence 999999988843
No 257
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=76.73 E-value=8.7 Score=34.56 Aligned_cols=84 Identities=12% Similarity=-0.051 Sum_probs=51.3
Q ss_pred hHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccc--cccc-hhHHHHHHHh------hhhhhhHHHHHHHHhh
Q 024876 177 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM--FQLF-GKYRDMALAV------KNPCHLNMAACLLKLK 247 (261)
Q Consensus 177 e~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~--~~~~-~~~~~~~~~l------~~~~~~N~A~c~lKl~ 247 (261)
.-...+......|+-+++.|+|..|+..|++|... ..+.. +..- -.+.+..... ...-+..+..+|.+.|
T Consensus 143 ~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~-~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G 221 (449)
T 1b89_A 143 LLYNNVSNFGRLASTLVHLGEYQAAVDGARKANST-RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRG 221 (449)
T ss_dssp HHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCH-HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCc-hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCC
Confidence 33556677778899999999999999999999422 00000 0000 0001111000 0011234678999999
Q ss_pred CHHHHHHHHHhhcC
Q 024876 248 RYEEAIGQCSLVSK 261 (261)
Q Consensus 248 ~~~~ai~~c~~aL~ 261 (261)
+|++|+....++|.
T Consensus 222 ~~eEai~lLe~aL~ 235 (449)
T 1b89_A 222 YFEELITMLEAALG 235 (449)
T ss_dssp CHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999988863
No 258
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.21 E-value=4 Score=38.51 Aligned_cols=74 Identities=12% Similarity=0.016 Sum_probs=43.1
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccc--cc-cccchhHHHHHHHhhhhhhhHHHH-HHHHhhCHHHHHHHHHhh
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDD--FM-FQLFGKYRDMALAVKNPCHLNMAA-CLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~--~~-~~~~~~~~~~~~~l~~~~~~N~A~-c~lKl~~~~~ai~~c~~a 259 (261)
+..|..+.+.+++..|.++|.++-.+-.-. .. ....+......+.....-.+|.|. |++++|++++|+..|.+.
T Consensus 685 ~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 685 RALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 677888899999999999999873321100 00 011111111122222233445555 888888888888877553
No 259
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=75.87 E-value=6.3 Score=34.84 Aligned_cols=63 Identities=10% Similarity=-0.056 Sum_probs=51.9
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
..|+-+|..|+|.+|+..|.+.++.+... + + ..+.+-+|+.....|..++++..+....++|.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~---d--d------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~ 166 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL---D--D------KNLLVEVQLLESKTYHALSNLPKARAALTSAR 166 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS---S--C------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc---c--c------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56888999999999999999999988642 1 1 35677889999999999999999988776653
No 260
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=74.79 E-value=4.8 Score=27.71 Aligned_cols=30 Identities=10% Similarity=0.092 Sum_probs=25.8
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
-+...|..+|+.|++..|+..|++|+++-.
T Consensus 48 i~~~L~~~~~~~g~~~~A~~~~~~al~l~P 77 (104)
T 2v5f_A 48 VLDYLSYAVYQQGDLDKALLLTKKLLELDP 77 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 346778999999999999999999998643
No 261
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=72.01 E-value=7.3 Score=33.21 Aligned_cols=57 Identities=11% Similarity=-0.080 Sum_probs=44.1
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHh
Q 024876 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (261)
Q Consensus 187 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~ 258 (261)
-.|..++..|++..|++.|.++|..-+. ...+.++.-++.+++++|+.+.|.....+
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~---------------~~~lea~~l~vqi~L~~~r~d~A~k~l~~ 161 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEA---------------EGTTELLLLAIEVALLNNNVSTASTIFDN 161 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCS---------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCC---------------cCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 5677888999999999999999764220 11235777789999999999999987754
No 262
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=71.65 E-value=3.4 Score=28.37 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHHHhhccc--cccccchhHHHHHHHhhhhhhhHHHHHHHHhh
Q 024876 196 EKLEEAMQQYEMAIAYMGDD--FMFQLFGKYRDMALAVKNPCHLNMAACLLKLK 247 (261)
Q Consensus 196 ~~~~~A~~~Y~kal~~l~~~--~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~ 247 (261)
|+-..|+..|++++..|..- .+.....+.++..+.|..+...|+..+.-.|.
T Consensus 33 G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL~ 86 (89)
T 3eab_A 33 GQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQ 86 (89)
T ss_dssp SSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55567777777777766432 12222467789999999999999988876653
No 263
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=70.53 E-value=7.9 Score=35.77 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=40.3
Q ss_pred hhhhhH-HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhC----------HHHHHHHHHhhcC
Q 024876 193 FKEEKL-EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR----------YEEAIGQCSLVSK 261 (261)
Q Consensus 193 fk~~~~-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~----------~~~ai~~c~~aL~ 261 (261)
.+.+.| .+|+..|.+++.+-.. ...++++++.|..++++ +++++..+++||+
T Consensus 39 ~~~~~~~eeal~~~~~~l~~nP~-----------------~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~ 101 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGANPD-----------------FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 101 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHCch-----------------hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH
Confidence 344444 4778899999876332 24689999999999999 9999999999873
No 264
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=69.63 E-value=0.95 Score=37.64 Aligned_cols=67 Identities=15% Similarity=0.034 Sum_probs=0.0
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHH
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC 242 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c 242 (261)
.+..+..|..+-.++.++=+.|+|..|+.+|..|+.+|-.....+ .+....+.-.-++.-|+++|--
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e-~d~~~k~~lr~Ki~eYl~RAE~ 82 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGT-KDNTKRCNLREKISKYMDRAEN 82 (257)
T ss_dssp --------------------------------------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777788888889999999999999999886532111 2223333344455567777654
No 265
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=69.01 E-value=7.7 Score=34.37 Aligned_cols=76 Identities=9% Similarity=-0.074 Sum_probs=47.1
Q ss_pred cchhhHHhhhhh---hHHHHHHHHHHHHHhhccccc------------cccchhHHHHHH------HhhhhhhhHHHHH-
Q 024876 185 RKMDGNALFKEE---KLEEAMQQYEMAIAYMGDDFM------------FQLFGKYRDMAL------AVKNPCHLNMAAC- 242 (261)
Q Consensus 185 ~K~~Gn~~fk~~---~~~~A~~~Y~kal~~l~~~~~------------~~~~~~~~~~~~------~l~~~~~~N~A~c- 242 (261)
....|..+++.| ++.+|+..|++++..-..... .....+..+.+. .-....++|++.+
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~~ 258 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLL 258 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345577777788 999999999999765322100 000011111111 2234567888888
Q ss_pred H--HHhhCHHHHHHHHHhhc
Q 024876 243 L--LKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 243 ~--lKl~~~~~ai~~c~~aL 260 (261)
+ ...+++.+|+....+++
T Consensus 259 ~~~~~~~d~~~A~~~~~~Aa 278 (452)
T 3e4b_A 259 YDFPELGDVEQMMKYLDNGR 278 (452)
T ss_dssp HHSGGGCCHHHHHHHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHH
Confidence 4 46788999998888775
No 266
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=67.02 E-value=7.8 Score=31.49 Aligned_cols=59 Identities=12% Similarity=0.009 Sum_probs=44.4
Q ss_pred hhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 193 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 193 fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
|..|+-..|...|+.|..+.....+. ...+++-+.+|.+..|.. +++.++|+..+.+|+
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~p---------thPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Af 195 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDK---------IEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLG 195 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGG---------GGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCC---------CChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 44555678999999999886542211 146788899999998885 678999999888874
No 267
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=66.24 E-value=6.8 Score=35.55 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=26.2
Q ss_pred hhhHhhhhcccchhh--HHhhhhhh-HHHHHHHHHHHHHhhcccc
Q 024876 175 VEERIGAADRRKMDG--NALFKEEK-LEEAMQQYEMAIAYMGDDF 216 (261)
Q Consensus 175 ~ee~~~~a~~~K~~G--n~~fk~~~-~~~A~~~Y~kal~~l~~~~ 216 (261)
.++|+..|+..++++ +.-=+.-+ -++|+.+|++|+.+|....
T Consensus 422 L~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 422 LQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455566666555554 22112233 3589999999999997643
No 268
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=65.67 E-value=7.3 Score=33.21 Aligned_cols=46 Identities=20% Similarity=0.091 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 197 KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 197 ~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
+|..|+..|+.+..-.... ....+++| |++++|+|++|......++
T Consensus 193 ~~q~A~~~f~El~~~~p~~---------------~~~~lLln---~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPTW---------------KTQLGLLN---LHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp TTTHHHHHHHHHHTTSCSH---------------HHHHHHHH---HHHHHTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCc---------------ccHHHHHH---HHHHcCCHHHHHHHHHHHH
Confidence 7788888888865433210 01245666 9999999999999887543
No 269
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=65.53 E-value=8.5 Score=32.59 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh--CHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK--RYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~--~~~~ai~~c~~aL 260 (261)
.+|+..|.++|.+-.. ..++.+++..+...++ .+.+++..++.+|
T Consensus 50 ~~aL~~t~~~L~~nP~-----------------~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L 96 (306)
T 3dra_A 50 ERALHITELGINELAS-----------------HYTIWIYRFNILKNLPNRNLYDELDWCEEIA 96 (306)
T ss_dssp HHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcH-----------------HHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 5899999999986432 1468999999999999 9999999999887
No 270
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=64.21 E-value=14 Score=30.71 Aligned_cols=52 Identities=19% Similarity=0.193 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
..|...|+.|..+. ...+.. ..+++-+.+|.+..|.. +++.++|+.-+.+|+
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt---------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT---------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT---------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC---------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788899999887 432211 35778899999999887 789999999888775
No 271
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=63.70 E-value=11 Score=30.81 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
..|...|+.|+.+.....+. ...+++-+.+|.+..|.. +++.++|+.-+.+|+
T Consensus 147 e~a~~aY~~A~~iA~~~L~p---------thPirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPP---------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCC---------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788899999876432111 146778899999999887 789999999888775
No 272
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=63.24 E-value=8.9 Score=31.60 Aligned_cols=53 Identities=13% Similarity=0.065 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
..|...|+.|..+.....+. ...+++-+.+|.+..|.. +++.+.|+.-|.+|+
T Consensus 148 ~~a~~aY~~A~~iA~~~L~p---------thPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQP---------THPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC---------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 47788899998876432111 146778899999988887 788999999888775
No 273
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=62.88 E-value=9.8 Score=32.20 Aligned_cols=58 Identities=7% Similarity=-0.201 Sum_probs=41.1
Q ss_pred chhhHHhhhhh--hHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHH----HHh---hCHHHHHHHH
Q 024876 186 KMDGNALFKEE--KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACL----LKL---KRYEEAIGQC 256 (261)
Q Consensus 186 K~~Gn~~fk~~--~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~----lKl---~~~~~ai~~c 256 (261)
.-+|.-+...+ +|..|+..+.++|...... ..+.+++..+. .++ +++.+++..|
T Consensus 71 n~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~-----------------y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~ 133 (306)
T 3dra_A 71 IYRFNILKNLPNRNLYDELDWCEEIALDNEKN-----------------YQIWNYRQLIIGQIMELNNNDFDPYREFDIL 133 (306)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC-----------------CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHH
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHHCccc-----------------HHHHHHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 34455555555 8899999999888754322 35677777777 566 6888999988
Q ss_pred Hhhc
Q 024876 257 SLVS 260 (261)
Q Consensus 257 ~~aL 260 (261)
+++|
T Consensus 134 ~~~l 137 (306)
T 3dra_A 134 EAML 137 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8886
No 274
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=61.47 E-value=9.9 Score=31.53 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
..|...|+.|..+.....+. ...+++-+.+|.+..|.. +++.++|+.-|.+|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~p---------ThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPP---------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC---------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788899998875432111 146778899999988887 689999999888775
No 275
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=60.97 E-value=9.7 Score=31.71 Aligned_cols=54 Identities=17% Similarity=0.058 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHhhcccc--ccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 198 LEEAMQQYEMAIAYMGDDF--MFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 198 ~~~A~~~Y~kal~~l~~~~--~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
-..|...|+.|..+..... +. ...+++-+.+|.+..|.. +++.++|+.-+.+|+
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~p---------ThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYP---------SDPLYLATILNYTILKYDLLGNPEGAMKFANRAI 224 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGG---------GCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC---------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567889999988764322 11 146788899999999884 789999999988875
No 276
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=60.46 E-value=18 Score=31.67 Aligned_cols=55 Identities=11% Similarity=-0.055 Sum_probs=43.8
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.+-.++..|++..|+...++|+.+- .. ...|.-++.++.-.|++++|+....+|+
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln-~s-----------------~~a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLE-MS-----------------WLNYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC-CC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcC-CC-----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3445667899999999999999872 11 1345667889999999999999999886
No 277
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=60.34 E-value=13 Score=30.80 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 199 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
..|...|+.|..+.....+. ...+++-+.+|.+..|.. +++.++|+.-+.+|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~p---------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAP---------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC---------CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 46788899999876432111 146778899999998887 689999999888775
No 278
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=59.82 E-value=1.9 Score=38.70 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=0.0
Q ss_pred hHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 177 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 177 e~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
+.++.|..+-.+|..+=+.|+|.+|+.+|+.|+.++..
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567777778888888999999999999999999864
No 279
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=58.83 E-value=11 Score=30.87 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhhc
Q 024876 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVS 260 (261)
Q Consensus 198 ~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~aL 260 (261)
-..|...|+.|..+.....+. ...+++-+.+|.+..|.. +++.++|+.-+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~p---------thPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPP---------TNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC---------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 357788899998876432111 146778899999998884 588999999888775
No 280
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=56.97 E-value=20 Score=31.04 Aligned_cols=28 Identities=7% Similarity=-0.198 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHh-h-CHHHHHHHHHhhcC
Q 024876 234 PCHLNMAACLLKL-K-RYEEAIGQCSLVSK 261 (261)
Q Consensus 234 ~~~~N~A~c~lKl-~-~~~~ai~~c~~aL~ 261 (261)
.+.+++..|..++ + ++.+++..|+++|+
T Consensus 124 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 124 QVWHHRLLLLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHHHHHHHHHHHCCSCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 3556666666666 5 66677777666653
No 281
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=56.38 E-value=10 Score=24.96 Aligned_cols=40 Identities=20% Similarity=0.163 Sum_probs=32.8
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
.+++-....+--..|-.+..+|++..|+.++.+|+..+..
T Consensus 10 ~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 10 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4455566667778899999999999999999999998754
No 282
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=54.68 E-value=25 Score=30.07 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=42.0
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHh
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl 246 (261)
-..|-.+|+.|+|.+|+..|+.+|..+.-.. -.++++.++++++...|.-=+-++.+.+
T Consensus 106 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~--v~~~~e~~e~~eli~icreYilal~iEl 164 (320)
T 3mkr_B 106 LQLCYQLTTVGKFEEAVEKFRSILLSVPLLV--VDNKQEIAEAQQLITICREYIVGLSMET 164 (320)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHGGGCC--CCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhhee--eccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4679999999999999999999998774321 1234455667777776766555555555
No 283
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=53.08 E-value=21 Score=27.95 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=20.5
Q ss_pred hHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 237 LNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 237 ~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.--++|+.|+++|..|+......|
T Consensus 66 YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 66 YYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999887766
No 284
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=52.71 E-value=24 Score=30.21 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=40.9
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHh
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL 246 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl 246 (261)
-+.|-.+|+.|+|.+|+..|+.+|..+.-... .++++.++++++...|..=+-++.+.+
T Consensus 118 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v--~~~~e~~e~~eli~icrEYilal~iEl 176 (325)
T 3mv2_A 118 MNEGYKNFKLNKPDIAIECFREAIYRITLLMV--DDAEDEKLAHKILETAREYILGLSIEL 176 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCB--CSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhheeee--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44799999999999999999999987643211 123455566666666665555555554
No 285
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=51.09 E-value=23 Score=24.49 Aligned_cols=41 Identities=20% Similarity=0.159 Sum_probs=34.7
Q ss_pred chhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 174 ~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
+.+++-.....--..|-.++.+|++..|+.++.+|+..+..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45566677777888999999999999999999999988754
No 286
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=47.83 E-value=34 Score=29.26 Aligned_cols=46 Identities=9% Similarity=0.100 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh--CHHHHHHHHHhhc
Q 024876 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK--RYEEAIGQCSLVS 260 (261)
Q Consensus 198 ~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~--~~~~ai~~c~~aL 260 (261)
|..++..+..++..-..+ ..+++++..|..+++ .|.+++..|+++|
T Consensus 90 l~~EL~~~~~~L~~~PKn-----------------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l 137 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKS-----------------YGTWHHRCWLLSRLPEPNWARELELCARFL 137 (331)
T ss_dssp HHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHhccCcccHHHHHHHHHHHH
Confidence 566777777766543221 234555555555555 2555555555554
No 287
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=45.07 E-value=29 Score=29.96 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhh-CHHHHHHHHHhhc
Q 024876 196 EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVS 260 (261)
Q Consensus 196 ~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~-~~~~ai~~c~~aL 260 (261)
+...+|+..+.++|.+-.. ...+.+++..+...++ .+++++..++.+|
T Consensus 68 e~se~AL~lt~~~L~~nP~-----------------~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L 116 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPA-----------------HYTVWQYRFSLLTSLNKSLEDELRLMNEFA 116 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTT-----------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCch-----------------hHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3446899999999976432 2468899999999999 5999999999987
No 288
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=40.45 E-value=30 Score=29.63 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=35.2
Q ss_pred hhhhHH-HHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhC----------HHHHHHHHHhhc
Q 024876 194 KEEKLE-EAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR----------YEEAIGQCSLVS 260 (261)
Q Consensus 194 k~~~~~-~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~----------~~~ai~~c~~aL 260 (261)
+.|.|. +|+..+.++|.+-... .++.+.+..|...++. +.+++..++.+|
T Consensus 41 ~~~e~s~eaL~~t~~~L~~nP~~-----------------ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L 101 (331)
T 3dss_A 41 QAGELDESVLELTSQILGANPDF-----------------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCL 101 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTCTTC-----------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchh-----------------HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHH
Confidence 466666 7888888888653321 3566777777777665 688888888876
No 289
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=39.55 E-value=42 Score=25.22 Aligned_cols=23 Identities=9% Similarity=0.086 Sum_probs=19.8
Q ss_pred hHHHHHHhhcCCCCcEEEEEEeC
Q 024876 109 MTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 109 i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
...|-.||.+.++|+.+.+..|.
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCC
Confidence 35688999999999999998765
No 290
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=38.62 E-value=44 Score=28.25 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=42.3
Q ss_pred chhhHHhhhh-----hhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHH-hhCHHHHHHHHHhh
Q 024876 186 KMDGNALFKE-----EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLV 259 (261)
Q Consensus 186 K~~Gn~~fk~-----~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lK-l~~~~~ai~~c~~a 259 (261)
.-.|.-+++. |+..+|.++|+|||.+-... .+..+.-.|.-++. ++++..+....++|
T Consensus 203 ~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~----------------~id~~v~YA~~l~~~~gd~~~a~~~L~kA 266 (301)
T 3u64_A 203 NVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH----------------DPDHHITYADALCIPLNNRAGFDEALDRA 266 (301)
T ss_dssp HHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT----------------CSHHHHHHHHHTTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC----------------CchHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3345555553 99999999999999875421 12455556776766 48899999988888
Q ss_pred c
Q 024876 260 S 260 (261)
Q Consensus 260 L 260 (261)
|
T Consensus 267 L 267 (301)
T 3u64_A 267 L 267 (301)
T ss_dssp H
T ss_pred H
Confidence 6
No 291
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=37.08 E-value=64 Score=23.56 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=20.3
Q ss_pred hhHHHHHHhhcCCCCcEEEEEEeC
Q 024876 108 EMTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 108 ~i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
+...+-.||.+.++|+.+.+..|.
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~ 113 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPG 113 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 445788999999999999998765
No 292
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=36.88 E-value=74 Score=23.94 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=20.3
Q ss_pred hhHHHHHHhhcCCCCcEEEEEEeC
Q 024876 108 EMTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 108 ~i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
+...|-.||.+.++|+.+.+..|.
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P~ 143 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTPA 143 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECSS
T ss_pred CCCHHHHHhcCCCCCCEEEEEcCC
Confidence 456788999999999999988754
No 293
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=34.84 E-value=51 Score=29.73 Aligned_cols=33 Identities=30% Similarity=0.332 Sum_probs=23.6
Q ss_pred HHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 227 MALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 227 ~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
....|+..+|+|. .+|.-.++|.+|+..|.+++
T Consensus 189 aA~allarvyL~~-~~y~~~~~~~~A~~~a~~vi 221 (499)
T 3jys_A 189 VASALLARMYLNA-EIYTGKARYTECINACNEVI 221 (499)
T ss_dssp HHHHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-hhccChhHHHHHHHHHHHHH
Confidence 3455566666653 34556789999999999986
No 294
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.81 E-value=1.1e+02 Score=26.94 Aligned_cols=63 Identities=14% Similarity=-0.028 Sum_probs=45.6
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhh
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~a 259 (261)
...++-++..|+|..|.........-.... .+ ...++.+++-....|+..++|..|....+++
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~-----~~------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGS-----ME------MSEKIQFILEQMELSILKGDYSQATVLSRKI 203 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSS-----SC------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhc-----cc------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 445778888999999998887776433211 11 2345667777888899999999998887765
No 295
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=32.51 E-value=26 Score=25.71 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=27.6
Q ss_pred hhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhh
Q 024876 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (261)
Q Consensus 179 ~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l 212 (261)
+..+..+-+.|-+++.+|+..+|..+|-+|...+
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeea 37 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEA 37 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3456677788999999999999999998886543
No 296
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=32.22 E-value=83 Score=27.56 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=22.7
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
.|.-+|+.++|++|++.|..|-..+.
T Consensus 302 lgGy~yR~~~~reAl~~WA~Aa~Vi~ 327 (472)
T 3re2_A 302 LGGYYYRKKKYYEAIASWVDAGYVAG 327 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhcchHHHHHHHHHHHHHHHH
Confidence 37788999999999999999987764
No 297
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=32.14 E-value=50 Score=24.38 Aligned_cols=24 Identities=4% Similarity=-0.006 Sum_probs=19.5
Q ss_pred hhHHHHHHhhcCCCCcEEEEEEeC
Q 024876 108 EMTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 108 ~i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
+...+-.||.+.++|+.+.+..|.
T Consensus 93 ~~SPlG~ALlGk~vGD~v~v~~P~ 116 (141)
T 2pn0_A 93 ILAPVGSALLGLAQGDEIEWPKPG 116 (141)
T ss_dssp TTSTTHHHHTTCBTTCEEEEECTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 345678999999999999988654
No 298
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=31.88 E-value=40 Score=22.82 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=33.1
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
.++.++.+...-+.|..++++|++..|+.++.=|-.+|+.
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLDA 67 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLEI 67 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4566888889999999999999999999988777766653
No 299
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=31.78 E-value=42 Score=22.75 Aligned_cols=39 Identities=10% Similarity=0.003 Sum_probs=32.5
Q ss_pred hhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 175 ~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
.++.++.+...-+.|..++++|++..|+.++.=|-.+|+
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 70 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLLD 70 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999998777766654
No 300
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=31.68 E-value=51 Score=24.82 Aligned_cols=24 Identities=8% Similarity=0.084 Sum_probs=17.3
Q ss_pred hhHHHHHHhhcCCCCcEEEEEEeC
Q 024876 108 EMTGLAIGVSSMKAGEHALLHVGW 131 (261)
Q Consensus 108 ~i~gle~~l~~Mk~Ge~~~~~i~~ 131 (261)
+...+-.||.+.++|+.+.+..|.
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~ 145 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPG 145 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 345788999999999999888765
No 301
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=31.34 E-value=80 Score=24.36 Aligned_cols=29 Identities=7% Similarity=-0.105 Sum_probs=24.8
Q ss_pred hcccchhhHHhhhhhhHHHHHHHHHHHHH
Q 024876 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIA 210 (261)
Q Consensus 182 a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~ 210 (261)
-...+..|.....+|++.-|.++|+++-.
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 34578889999999999999999998854
No 302
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=29.98 E-value=51 Score=24.81 Aligned_cols=28 Identities=7% Similarity=-0.033 Sum_probs=23.4
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHHHHh
Q 024876 184 RRKMDGNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 184 ~~K~~Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
.+-..|-.+|+.++|.+|.+...++|+.
T Consensus 73 ~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 73 YVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3455677789999999999999999986
No 303
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=28.48 E-value=33 Score=22.74 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=26.3
Q ss_pred CchhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 173 MTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 173 l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
|+..+..+.+. .|-++--.|||..|+..|+.++..++.
T Consensus 7 ~~~~~i~e~~k----~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 7 MSLQMIVENVK----LAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp SSSHHHHHHHH----HHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHH----HHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 44445444443 344555679999999999999987653
No 304
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=28.34 E-value=1.7e+02 Score=22.09 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=41.0
Q ss_pred chhhHHhhhhhhHHHHHHHHHHHHHhhccccccccchhHHHHHHHhhhhhh-hHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCH-LNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 186 K~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~l~~~~~-~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
-..|-.+|+.|+|-.|......+=.-... .++++. -++-.+. +=.|..++..+++..|...+.+|+
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~------~~~er~---~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGR------GNTESK---FLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCS------SSHHHH---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCC------CchHHH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 45678899999999988887766543211 111221 1122222 334555666789999999988875
No 305
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=28.25 E-value=1e+02 Score=27.51 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=22.6
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 188 DGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 188 ~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
.|.-+|+.++|.+|++.|..|-..+.
T Consensus 324 lgGy~yR~~~~reAl~~WA~Aa~Vi~ 349 (550)
T 3u84_A 324 LAGYHCRNRNVREALQAWADTATVIQ 349 (550)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cchhhhhcchHHHHHHHHHHHHHHHH
Confidence 37788999999999999999977764
No 306
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=27.85 E-value=63 Score=23.45 Aligned_cols=27 Identities=7% Similarity=-0.012 Sum_probs=21.9
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHHHHh
Q 024876 185 RKMDGNALFKEEKLEEAMQQYEMAIAY 211 (261)
Q Consensus 185 ~K~~Gn~~fk~~~~~~A~~~Y~kal~~ 211 (261)
+--.|-.+||.|+|..|.++....|+.
T Consensus 77 lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 77 VFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 344577889999999999999888875
No 307
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=26.81 E-value=89 Score=27.98 Aligned_cols=33 Identities=18% Similarity=0.085 Sum_probs=20.2
Q ss_pred HHHhhhhhhhHHHHHHHHhhCHHHHHHHHHhhcC
Q 024876 228 ALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVSK 261 (261)
Q Consensus 228 ~~~l~~~~~~N~A~c~lKl~~~~~ai~~c~~aL~ 261 (261)
...|+..+|++++. +...++|++|+..|.+|++
T Consensus 199 A~allArvyL~~~~-~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 199 NWLLRARLYLNAGV-YTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHTHHH-HHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhh-ccCchhHHHHHHHHHHHHh
Confidence 34444444443322 2224799999999999873
No 308
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=21.79 E-value=1e+02 Score=22.89 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=36.4
Q ss_pred CCchhhHhhhhcccchhhHHhhhhhhHHHHHHHHHHHHHhhc
Q 024876 172 DMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (261)
Q Consensus 172 ~l~~ee~~~~a~~~K~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 213 (261)
..+...-+..+..+-..+..+...|++..|.-.|-|.+.++-
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 445666788889999999999999999999999999988774
No 309
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=21.66 E-value=1.3e+02 Score=26.61 Aligned_cols=27 Identities=11% Similarity=0.032 Sum_probs=21.9
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.=+|.+||-+++|.+|+..|.+||
T Consensus 191 aa~allarvyL~~~~~~~A~~~a~~vi 217 (454)
T 3myv_A 191 AARALLARIYLYHDDNRKAFDLADQLI 217 (454)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 344456777888899999999999987
No 310
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=21.59 E-value=44 Score=23.70 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=18.3
Q ss_pred chhHHHHHHhhcCCCCcEEE
Q 024876 107 KEMTGLAIGVSSMKAGEHAL 126 (261)
Q Consensus 107 ~~i~gle~~l~~Mk~Ge~~~ 126 (261)
.+.+.|+.++..|++|+...
T Consensus 81 ~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 81 EMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp SSCHHHHHHHTTSCBTCBCC
T ss_pred CCCchHHHHHhcCCCCCCCC
Confidence 68899999999999999875
No 311
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=20.78 E-value=1.7e+02 Score=26.11 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=23.3
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhhcc
Q 024876 189 GNALFKEEKLEEAMQQYEMAIAYMGD 214 (261)
Q Consensus 189 Gn~~fk~~~~~~A~~~Y~kal~~l~~ 214 (261)
|..+|+.++|..|++.|..|-..+..
T Consensus 310 gG~~~R~~~~~eAl~~wa~aa~Vi~~ 335 (489)
T 4gq4_A 310 AGYHCRNRNVREALQAWADTATVIQD 335 (489)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred chHHHHhhhHHHHHHHhhhhhhhhhh
Confidence 88899999999999999999887753
No 312
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=20.27 E-value=1.4e+02 Score=26.37 Aligned_cols=27 Identities=15% Similarity=0.113 Sum_probs=21.4
Q ss_pred hhhhHHHHHHHHhhCHHHHHHHHHhhc
Q 024876 234 PCHLNMAACLLKLKRYEEAIGQCSLVS 260 (261)
Q Consensus 234 ~~~~N~A~c~lKl~~~~~ai~~c~~aL 260 (261)
.++.=+|.+||-+++|.+|+..|.+||
T Consensus 197 aa~allArvyL~~~~~~~A~~~a~~vi 223 (461)
T 3kez_A 197 AAMTLLSRVYLYKGEYNEALTMAENAI 223 (461)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344446777777899999999999986
Done!