Query 024878
Match_columns 261
No_of_seqs 173 out of 1107
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 15:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j9j_A Stationary phase surviV 100.0 2.1E-64 7E-69 455.9 18.2 180 67-260 1-181 (247)
2 2phj_A 5'-nucleotidase SURE; S 100.0 4E-64 1.4E-68 454.9 19.4 181 67-260 2-183 (251)
3 2wqk_A 5'-nucleotidase SURE; S 100.0 4.5E-64 1.5E-68 454.0 19.7 182 66-260 1-183 (251)
4 3ty2_A 5'-nucleotidase SURE; s 100.0 4.5E-64 1.5E-68 456.7 16.3 183 63-260 8-191 (261)
5 2v4n_A Multifunctional protein 100.0 1.1E-63 3.9E-68 452.6 18.0 178 66-260 1-180 (254)
6 2e6c_A 5'-nucleotidase SURE; S 100.0 4.8E-63 1.7E-67 446.2 18.6 176 67-260 1-180 (244)
7 1l5x_A SurviVal protein E; str 100.0 4.5E-63 1.5E-67 454.1 16.2 184 67-260 1-190 (280)
8 3oti_A CALG3; calicheamicin, T 96.2 0.015 5.1E-07 52.5 8.5 41 61-102 15-56 (398)
9 4fzr_A SSFS6; structural genom 95.9 0.023 7.9E-07 51.1 8.2 41 63-104 12-53 (398)
10 3tsa_A SPNG, NDP-rhamnosyltran 94.9 0.016 5.6E-07 51.7 3.7 37 66-103 1-38 (391)
11 3rsc_A CALG2; TDP, enediyne, s 94.8 0.087 3E-06 47.4 8.3 42 59-104 13-58 (415)
12 3otg_A CALG1; calicheamicin, T 94.6 0.1 3.4E-06 46.7 8.0 41 62-103 16-57 (412)
13 3fro_A GLGA glycogen synthase; 94.5 0.42 1.4E-05 42.3 11.8 41 65-106 1-47 (439)
14 3ia7_A CALG4; glycosysltransfe 94.1 0.11 3.8E-06 46.0 7.2 36 67-103 5-41 (402)
15 3h4t_A Glycosyltransferase GTF 93.6 0.056 1.9E-06 49.4 4.3 37 67-104 1-38 (404)
16 2iya_A OLEI, oleandomycin glyc 93.1 0.51 1.7E-05 42.7 9.9 39 64-106 10-52 (424)
17 2iyf_A OLED, oleandomycin glyc 91.5 0.86 2.9E-05 41.1 9.2 37 65-105 6-46 (430)
18 4amg_A Snogd; transferase, pol 86.7 0.66 2.3E-05 41.1 4.7 44 58-105 14-61 (400)
19 2iuy_A Avigt4, glycosyltransfe 81.8 0.98 3.4E-05 39.2 3.5 41 65-106 2-59 (342)
20 2lpm_A Two-component response 77.5 8.2 0.00028 30.1 7.3 86 61-198 3-88 (123)
21 3s2u_A UDP-N-acetylglucosamine 77.0 4.2 0.00014 36.7 6.2 32 66-101 2-37 (365)
22 3kkl_A Probable chaperone prot 75.4 0.97 3.3E-05 39.6 1.5 42 64-106 3-54 (244)
23 2r60_A Glycosyl transferase, g 73.8 2.3 7.7E-05 39.2 3.6 40 65-105 6-61 (499)
24 2yjn_A ERYCIII, glycosyltransf 70.8 3.8 0.00013 37.3 4.3 37 64-104 18-58 (441)
25 3c48_A Predicted glycosyltrans 70.4 6.7 0.00023 34.9 5.8 42 63-105 17-70 (438)
26 2gek_A Phosphatidylinositol ma 69.6 6.3 0.00022 34.4 5.4 43 64-107 18-65 (406)
27 3n7t_A Macrophage binding prot 69.1 4.4 0.00015 35.5 4.2 41 65-106 10-60 (247)
28 1f0k_A MURG, UDP-N-acetylgluco 69.1 4.2 0.00014 35.2 4.1 35 66-104 6-44 (364)
29 1rzu_A Glycogen synthase 1; gl 66.7 3.4 0.00012 37.7 3.1 37 67-104 1-44 (485)
30 3vue_A GBSS-I, granule-bound s 66.0 6.4 0.00022 37.8 5.0 44 61-105 4-54 (536)
31 2iw1_A Lipopolysaccharide core 65.8 4.7 0.00016 34.8 3.7 37 67-104 1-41 (374)
32 2qzs_A Glycogen synthase; glyc 65.7 3.8 0.00013 37.3 3.2 37 67-104 1-44 (485)
33 2x6q_A Trehalose-synthase TRET 63.0 12 0.0004 33.2 5.9 40 64-105 38-81 (416)
34 1wd5_A Hypothetical protein TT 61.2 13 0.00044 31.1 5.5 42 65-107 119-161 (208)
35 1oi4_A Hypothetical protein YH 59.7 17 0.00057 29.8 5.8 40 66-106 23-62 (193)
36 3gpi_A NAD-dependent epimerase 59.7 13 0.00044 31.4 5.3 35 65-105 2-37 (286)
37 4b4o_A Epimerase family protei 59.3 10 0.00034 32.4 4.6 31 67-101 1-31 (298)
38 1rrv_A Glycosyltransferase GTF 58.6 7.2 0.00025 35.1 3.7 34 67-104 1-38 (416)
39 1iir_A Glycosyltransferase GTF 57.0 11 0.00037 34.0 4.6 35 67-105 1-39 (415)
40 2p6p_A Glycosyl transferase; X 55.4 6.7 0.00023 34.5 2.9 37 67-104 1-38 (384)
41 3t8y_A CHEB, chemotaxis respon 53.7 23 0.00078 27.2 5.5 32 59-93 18-49 (164)
42 1kjq_A GART 2, phosphoribosylg 53.3 80 0.0027 27.9 9.7 39 63-106 8-46 (391)
43 2iuf_A Catalase; oxidoreductas 52.7 4.9 0.00017 40.8 1.7 41 63-104 528-568 (688)
44 1rw7_A YDR533CP; alpha-beta sa 52.6 9.9 0.00034 32.5 3.4 40 65-105 4-53 (243)
45 1u9c_A APC35852; structural ge 52.1 17 0.00058 30.2 4.7 41 65-106 6-54 (224)
46 3ej6_A Catalase-3; heme, hydro 50.2 33 0.0011 34.9 7.1 41 62-105 535-576 (688)
47 3ius_A Uncharacterized conserv 50.1 19 0.00064 30.3 4.7 32 65-103 4-37 (286)
48 4e08_A DJ-1 beta; flavodoxin-l 48.2 17 0.00057 29.6 4.0 35 67-104 8-42 (190)
49 3l18_A Intracellular protease 47.6 10 0.00035 30.0 2.5 38 66-104 2-39 (168)
50 4hcj_A THIJ/PFPI domain protei 45.6 5.6 0.00019 33.0 0.7 41 64-105 6-46 (177)
51 2fwm_X 2,3-dihydro-2,3-dihydro 45.5 86 0.003 26.0 8.2 77 62-161 3-80 (250)
52 2x0d_A WSAF; GT4 family, trans 45.2 13 0.00044 34.1 3.1 41 63-104 43-89 (413)
53 2vrn_A Protease I, DR1199; cys 44.2 15 0.00052 29.6 3.1 40 65-105 8-47 (190)
54 2r85_A PURP protein PF1517; AT 43.0 27 0.00092 30.1 4.7 34 66-105 2-35 (334)
55 4g41_A MTA/SAH nucleosidase; m 41.4 68 0.0023 26.7 6.9 48 178-225 180-232 (236)
56 3gem_A Short chain dehydrogena 40.8 18 0.00062 30.8 3.2 83 61-161 22-105 (260)
57 3cwc_A Putative glycerate kina 40.1 48 0.0017 31.3 6.2 43 155-199 287-329 (383)
58 3re1_A Uroporphyrinogen-III sy 39.9 18 0.0006 31.3 3.0 36 59-99 7-42 (269)
59 4h15_A Short chain alcohol deh 39.0 1.4E+02 0.0047 25.8 8.7 81 63-166 8-91 (261)
60 4gi5_A Quinone reductase; prot 38.4 18 0.00062 32.3 2.9 42 58-100 14-59 (280)
61 3okp_A GDP-mannose-dependent a 37.9 8 0.00028 33.5 0.5 40 64-106 2-46 (394)
62 1n57_A Chaperone HSP31, protei 37.2 46 0.0016 29.4 5.4 31 75-106 71-101 (291)
63 3ot1_A 4-methyl-5(B-hydroxyeth 36.7 24 0.00081 29.3 3.2 36 68-104 11-46 (208)
64 3un1_A Probable oxidoreductase 36.6 1.9E+02 0.0064 24.2 13.4 36 64-104 26-62 (260)
65 2cve_A Hypothetical protein TT 35.4 28 0.00095 29.8 3.5 30 71-101 59-90 (191)
66 4gdh_A DJ-1, uncharacterized p 35.2 39 0.0014 27.8 4.3 42 63-107 3-44 (194)
67 2pn1_A Carbamoylphosphate synt 35.2 64 0.0022 27.8 5.9 36 64-104 2-38 (331)
68 1vi7_A Hypothetical protein YI 34.6 29 0.00098 30.3 3.5 30 71-101 71-102 (217)
69 2rk3_A Protein DJ-1; parkinson 34.0 42 0.0014 27.3 4.3 36 67-105 6-41 (197)
70 3to5_A CHEY homolog; alpha(5)b 34.0 34 0.0012 26.7 3.5 39 154-198 56-96 (134)
71 2ab0_A YAJL; DJ-1/THIJ superfa 33.5 27 0.00092 28.8 3.0 35 68-105 6-40 (205)
72 2dzd_A Pyruvate carboxylase; b 33.5 94 0.0032 28.5 7.0 35 67-106 7-41 (461)
73 2geb_A Hypoxanthine-guanine ph 33.3 28 0.00096 28.5 3.1 43 65-108 97-140 (185)
74 3ono_A Ribose/galactose isomer 33.3 33 0.0011 30.0 3.6 36 65-101 2-40 (214)
75 3dqp_A Oxidoreductase YLBE; al 33.2 1.8E+02 0.0062 23.1 9.0 105 67-198 1-107 (219)
76 3vtz_A Glucose 1-dehydrogenase 32.8 1.2E+02 0.0041 25.6 7.2 76 63-161 11-87 (269)
77 3s28_A Sucrose synthase 1; gly 32.6 2E+02 0.0069 29.3 9.9 40 64-104 276-341 (816)
78 3o4v_A MTA/SAH nucleosidase; m 32.4 79 0.0027 26.3 5.9 51 178-228 177-232 (234)
79 1z7g_A HGPRT, HGPRTASE, hypoxa 32.1 33 0.0011 29.0 3.4 42 65-107 125-167 (217)
80 3efe_A THIJ/PFPI family protei 31.8 58 0.002 27.0 4.9 37 68-105 7-51 (212)
81 2dtx_A Glucose 1-dehydrogenase 31.4 1.3E+02 0.0045 25.2 7.2 73 65-161 7-80 (264)
82 3l3b_A ES1 family protein; ssg 31.2 51 0.0017 28.5 4.5 38 68-106 27-67 (242)
83 3uk7_A Class I glutamine amido 30.9 42 0.0014 30.5 4.2 39 67-106 206-244 (396)
84 1yfz_A Hypoxanthine-guanine ph 30.9 32 0.0011 28.6 3.1 43 65-108 117-160 (205)
85 1ka9_H Imidazole glycerol phos 30.9 68 0.0023 26.1 5.1 33 66-102 2-34 (200)
86 1tc1_A Protein (hypoxanthine p 30.7 32 0.0011 29.4 3.1 43 65-108 102-145 (220)
87 2jbh_A Phosphoribosyltransfera 30.6 32 0.0011 29.2 3.1 42 65-107 133-175 (225)
88 1vhq_A Enhancing lycopene bios 30.4 32 0.0011 29.0 3.0 38 67-105 9-49 (232)
89 1pzm_A HGPRT, hypoxanthine-gua 30.2 33 0.0011 28.9 3.1 43 65-108 117-160 (211)
90 2rdm_A Response regulator rece 30.2 58 0.002 23.2 4.1 38 155-198 50-88 (132)
91 3h5i_A Response regulator/sens 30.0 47 0.0016 24.3 3.7 39 154-199 49-88 (140)
92 2wzn_A TET3, 354AA long hypoth 29.9 35 0.0012 28.2 3.2 25 176-200 295-319 (354)
93 1id1_A Putative potassium chan 29.8 52 0.0018 25.3 4.0 34 65-103 2-35 (153)
94 1ccw_A Protein (glutamate muta 29.8 62 0.0021 25.3 4.5 32 65-98 2-35 (137)
95 3hv2_A Response regulator/HD d 29.4 45 0.0015 24.9 3.5 85 63-198 11-95 (153)
96 2xgg_A Microneme protein 2; A/ 29.3 43 0.0015 26.5 3.5 34 65-101 123-158 (178)
97 2fex_A Conserved hypothetical 28.8 65 0.0022 25.9 4.6 37 68-105 3-40 (188)
98 1hgx_A HGXPRTASE, hypoxanthine 28.7 47 0.0016 26.9 3.7 42 65-107 94-136 (183)
99 3beo_A UDP-N-acetylglucosamine 28.5 25 0.00087 30.2 2.1 19 176-196 290-308 (375)
100 1sy7_A Catalase 1; heme oxidat 28.0 2.1E+02 0.0071 29.0 8.9 39 67-106 535-573 (715)
101 3bsf_A AT4G34840, nucleosidase 28.0 1.6E+02 0.0053 25.0 7.1 53 178-230 190-249 (254)
102 3u27_C Microcompartments prote 27.2 30 0.001 30.3 2.3 105 79-189 48-206 (220)
103 1to6_A Glycerate kinase; glyce 26.8 87 0.003 29.4 5.5 42 154-198 277-318 (371)
104 1vdm_A Purine phosphoribosyltr 26.5 39 0.0013 26.3 2.7 35 65-100 82-117 (153)
105 2nm0_A Probable 3-oxacyl-(acyl 26.2 2.6E+02 0.0089 23.3 8.1 74 64-161 19-93 (253)
106 1fsg_A HGPRTASE, hypoxanthine- 26.1 43 0.0015 28.7 3.1 43 65-108 141-184 (233)
107 1v4v_A UDP-N-acetylglucosamine 25.9 32 0.0011 29.8 2.3 20 175-196 281-300 (376)
108 1hdo_A Biliverdin IX beta redu 25.9 96 0.0033 24.0 5.0 105 67-197 4-111 (206)
109 3enk_A UDP-glucose 4-epimerase 25.8 96 0.0033 26.4 5.4 34 65-103 4-38 (341)
110 4dim_A Phosphoribosylglycinami 25.4 60 0.0021 29.0 4.1 34 64-102 5-38 (403)
111 1a3c_A PYRR, pyrimidine operon 25.1 47 0.0016 26.7 3.0 39 65-104 97-137 (181)
112 1d7o_A Enoyl-[acyl-carrier pro 24.9 1.1E+02 0.0037 26.0 5.5 35 63-101 5-41 (297)
113 2vyo_A ECU11_0510, chitooligos 24.2 54 0.0018 28.2 3.4 35 64-99 23-57 (254)
114 3e8x_A Putative NAD-dependent 24.0 92 0.0032 25.2 4.7 36 63-103 18-54 (236)
115 3m6m_D Sensory/regulatory prot 23.9 42 0.0014 24.9 2.4 28 63-93 11-38 (143)
116 2gkg_A Response regulator homo 23.6 71 0.0024 22.3 3.5 26 65-93 4-29 (127)
117 1sby_A Alcohol dehydrogenase; 23.5 1.1E+02 0.0037 25.2 5.1 36 64-104 3-40 (254)
118 3oig_A Enoyl-[acyl-carrier-pro 23.5 1.3E+02 0.0046 24.8 5.7 37 63-102 4-41 (266)
119 3dp9_A MTA/SAH nucleosidase; v 23.4 92 0.0032 25.8 4.6 48 178-225 176-228 (231)
120 1vch_A Phosphoribosyltransfera 23.3 48 0.0016 26.4 2.7 34 65-99 119-153 (175)
121 3jte_A Response regulator rece 23.1 82 0.0028 22.8 3.8 39 154-198 48-86 (143)
122 2o6l_A UDP-glucuronosyltransfe 23.1 39 0.0013 26.1 2.1 91 66-197 21-114 (170)
123 3ttv_A Catalase HPII; heme ori 22.9 51 0.0017 33.8 3.4 37 65-104 601-637 (753)
124 3zbd_A NSP1, P9, non-structura 22.8 21 0.0007 28.4 0.4 31 59-90 6-36 (113)
125 4fs3_A Enoyl-[acyl-carrier-pro 22.7 1.3E+02 0.0046 25.2 5.6 34 65-102 5-40 (256)
126 3cz5_A Two-component response 22.7 2.3E+02 0.0078 20.7 8.4 39 154-198 50-88 (153)
127 2iyf_A OLED, oleandomycin glyc 22.6 40 0.0014 30.0 2.3 29 155-197 299-327 (430)
128 4amg_A Snogd; transferase, pol 22.4 2.9E+02 0.0098 23.8 7.9 32 154-198 127-158 (400)
129 3eei_A 5-methylthioadenosine n 21.9 1.5E+02 0.0051 24.5 5.7 48 178-225 179-231 (233)
130 2lw6_A Avrpiz-T protein; plant 21.9 17 0.00058 26.4 -0.3 16 165-180 62-79 (80)
131 3cg4_A Response regulator rece 21.8 96 0.0033 22.3 4.0 39 154-198 50-90 (142)
132 3gfh_A Ethanolamine utilizatio 21.7 16 0.00056 32.2 -0.5 52 133-187 150-202 (225)
133 3tsa_A SPNG, NDP-rhamnosyltran 21.6 44 0.0015 29.2 2.3 22 175-197 293-314 (391)
134 2ae2_A Protein (tropinone redu 21.3 1.5E+02 0.005 24.6 5.5 35 63-102 6-41 (260)
135 1dku_A Protein (phosphoribosyl 21.3 89 0.003 28.2 4.3 36 65-101 216-252 (317)
136 2o2s_A Enoyl-acyl carrier redu 21.1 1.4E+02 0.0048 25.7 5.5 33 65-101 8-42 (315)
137 1zn8_A APRT, adenine phosphori 21.1 56 0.0019 26.3 2.7 41 65-106 119-160 (180)
138 1lss_A TRK system potassium up 20.5 97 0.0033 22.5 3.8 33 66-103 4-36 (140)
139 3i42_A Response regulator rece 20.4 76 0.0026 22.5 3.1 39 154-198 46-86 (127)
140 1y0b_A Xanthine phosphoribosyl 20.3 71 0.0024 26.0 3.2 39 65-104 119-158 (197)
141 3eod_A Protein HNR; response r 20.3 92 0.0031 22.1 3.5 39 154-198 50-88 (130)
142 2cc0_A Acetyl-xylan esterase; 20.2 69 0.0024 26.0 3.1 28 66-94 4-31 (195)
143 1vgv_A UDP-N-acetylglucosamine 20.1 24 0.00081 30.6 0.2 19 177-197 291-309 (384)
144 3orf_A Dihydropteridine reduct 20.1 3.6E+02 0.012 22.1 8.5 71 66-161 22-93 (251)
145 3hzh_A Chemotaxis response reg 20.1 96 0.0033 23.2 3.8 88 63-198 33-120 (157)
146 2hy7_A Glucuronosyltransferase 20.0 99 0.0034 27.8 4.4 35 64-100 12-49 (406)
No 1
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=2.1e-64 Score=455.86 Aligned_cols=180 Identities=32% Similarity=0.497 Sum_probs=162.2
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeC-CceeEEecCChHHHHHHH
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCVSLA 145 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~-g~~~y~V~GTPaDCV~la 145 (261)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 799999999999999999999999976 99999999999999999999999999998643 336799999999999999
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHHHHH
Q 024878 146 LSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATR 225 (261)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~ 225 (261)
|++++. .+|||||||||+|.|+|.+++|||||||||||+++||||||||+.+.. ..+|+.|++++.+|+++++
T Consensus 79 l~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~----~~~~~~aa~~~~~lv~~l~- 151 (247)
T 1j9j_A 79 YNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANYE----SPDFEGAARFLIDFLKEFD- 151 (247)
T ss_dssp HHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCSS----SCCHHHHHHHHHHHHHHCC-
T ss_pred HHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecCCCC----CCCHHHHHHHHHHHHHHHH-
Confidence 998763 589999999999999999999999999999999999999999996421 3489999999888887764
Q ss_pred HhhcCCCCCCcEEEecCCCCCCCCCCeeEeeeeec
Q 024878 226 DIGKGIFPRSCLLNVEIPTSPLTNKVCPSKVVCEE 260 (261)
Q Consensus 226 ~~~~~~lp~~~~LNVN~P~~~~~~kg~k~t~~~~~ 260 (261)
+..||++++|||||| ..++||+|+|++.+.
T Consensus 152 ---~~~lp~~~~lNVN~P--~~~~~g~~~tr~~~~ 181 (247)
T 1j9j_A 152 ---FSLLDPFTMLNINVP--AGEIKGWRFTRQSRR 181 (247)
T ss_dssp ---GGGSCTTCEEEEEEC--SSCCCEEEECBCCCC
T ss_pred ---HcCCCcccEEEecCC--ccccCceEEEECCCc
Confidence 556899999999999 567999999998763
No 2
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=4e-64 Score=454.94 Aligned_cols=181 Identities=35% Similarity=0.504 Sum_probs=164.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~laL 146 (261)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999987 9999999999999999999999999999864 322 999999999999999
Q ss_pred hcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHHHHHH
Q 024878 147 SGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRD 226 (261)
Q Consensus 147 ~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~~ 226 (261)
++++. +.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.+|++++++
T Consensus 78 ~~l~~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~~- 151 (251)
T 2phj_A 78 RVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred HHhcC-CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHHHh-
Confidence 98763 468999999999999999999999999999999999999999999743 234799999999999988764
Q ss_pred hhcCCCCCCcEEEecCCCCCC-CCCCeeEeeeeec
Q 024878 227 IGKGIFPRSCLLNVEIPTSPL-TNKVCPSKVVCEE 260 (261)
Q Consensus 227 ~~~~~lp~~~~LNVN~P~~~~-~~kg~k~t~~~~~ 260 (261)
..+|++++||||||.++. ++||+|+||+.+.
T Consensus 152 ---~~lp~~~~lNVN~P~~~~~~~kgi~~tr~g~~ 183 (251)
T 2phj_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKR 183 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCC
T ss_pred ---cCCCCCEEEEecCCCCCccccCCEEEEECccc
Confidence 468999999999999875 6999999999863
No 3
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=4.5e-64 Score=453.95 Aligned_cols=182 Identities=35% Similarity=0.496 Sum_probs=164.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHH
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA 145 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~la 145 (261)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||+||+++|+++++++ ...+|+|+|||||||++|
T Consensus 1 Mp~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~la 76 (251)
T 2wqk_A 1 MPTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHLG 76 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhhh
Confidence 3799999999999999999999999987 899999999999999999999999999875 345788999999999999
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHHHHH
Q 024878 146 LSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATR 225 (261)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~ 225 (261)
|+++++ +.+|||||||||+|.|+|.+++|||||||||||+++||||||||+... ...+|+.+++++.++++++++
T Consensus 77 l~~~l~-~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~----~~~~~~~a~~~~~~ii~~ll~ 151 (251)
T 2wqk_A 77 YRVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN 151 (251)
T ss_dssp HHTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhcC-CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcccC----CCcchHHHHHHHHHHHHHHHH
Confidence 998664 568999999999999999999999999999999999999999999754 346899999999998888764
Q ss_pred HhhcCCCCCCcEEEecCCCCCC-CCCCeeEeeeeec
Q 024878 226 DIGKGIFPRSCLLNVEIPTSPL-TNKVCPSKVVCEE 260 (261)
Q Consensus 226 ~~~~~~lp~~~~LNVN~P~~~~-~~kg~k~t~~~~~ 260 (261)
..+|++++||||||.++. +.||+|+|++.+.
T Consensus 152 ----~~~~~~~~lNVN~P~~~~~~~~g~~~t~~g~~ 183 (251)
T 2wqk_A 152 ----EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKR 183 (251)
T ss_dssp ----HCCCTTEEEEEEEESSCGGGCCEEEECBCCCC
T ss_pred ----hCCccccccccccCCCCccccCceEeeecccc
Confidence 468999999999999875 6999999998764
No 4
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=4.5e-64 Score=456.68 Aligned_cols=183 Identities=33% Similarity=0.518 Sum_probs=162.9
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV 142 (261)
..++|||||||||||+||||++|+++|++ + |+|+||||++||||+||++|+++||++++++ ..+|+|+|||+|||
T Consensus 8 ~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~-~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaDCV 82 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGVYAKGLAILAKTLAD-L-GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTDCV 82 (261)
T ss_dssp ---CCEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHHHH
T ss_pred cCCCCeEEEEcCCCCCCHHHHHHHHHHHh-c-CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHHHH
Confidence 34569999999999999999999999998 4 6999999999999999999999999999864 34699999999999
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHH
Q 024878 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINA 222 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~ 222 (261)
++||++++. .+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.+|+++
T Consensus 83 ~lal~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~ 156 (261)
T 3ty2_A 83 HLAITGVLP--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLGGE----LFRYYETAAKVVYQLIQR 156 (261)
T ss_dssp HHHTTTTSS--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEECSS----SCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHH
Confidence 999998763 58999999999999999999999999999999999999999999743 245899999999999888
Q ss_pred HHHHhhcCCCCCCcEEEecCCCCCC-CCCCeeEeeeeec
Q 024878 223 ATRDIGKGIFPRSCLLNVEIPTSPL-TNKVCPSKVVCEE 260 (261)
Q Consensus 223 l~~~~~~~~lp~~~~LNVN~P~~~~-~~kg~k~t~~~~~ 260 (261)
++ +..||++++||||||.++. ++||+|+||+++.
T Consensus 157 l~----~~~lp~~~~lNVN~P~~~~~~~kGi~vtr~g~r 191 (261)
T 3ty2_A 157 IE----KDPLPPSTILNINVPDLPYEELKGFEVTRLGTR 191 (261)
T ss_dssp HH----HSCCCTTCEEEEEECSSCGGGCCEEEECBCCCB
T ss_pred HH----hcCCCCCeEEEecCCCCCcccCCceEEEECccc
Confidence 75 4568999999999999875 6999999999864
No 5
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=1.1e-63 Score=452.64 Aligned_cols=178 Identities=31% Similarity=0.511 Sum_probs=162.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEec-CChHHHHHH
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSL 144 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~-GTPaDCV~l 144 (261)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++ ...|+|+ |||+|||++
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL 75 (254)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence 4799999999999999999999999875 999999999999999999999999999873 3469999 999999999
Q ss_pred HHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHHHH
Q 024878 145 ALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAAT 224 (261)
Q Consensus 145 aL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~ 224 (261)
||++++ +.+|||||||||+|.|+|.+++|||||||||||+++||||||||+... .+|+.|++++.+|+++++
T Consensus 76 al~~ll--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~------~~~~~aa~~~~~li~~l~ 147 (254)
T 2v4n_A 76 GVNALM--RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGY------QHYDTAAAVTCALLRGLS 147 (254)
T ss_dssp HHHTTS--SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESSS------SCHHHHHHHHHHHHHHHH
T ss_pred HHhhcc--CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecCcc------cCHHHHHHHHHHHHHHHH
Confidence 999876 358999999999999999999999999999999999999999999642 389999999999888875
Q ss_pred HHhhcCCCCCCcEEEecCCCCCC-CCCCeeEeeeeec
Q 024878 225 RDIGKGIFPRSCLLNVEIPTSPL-TNKVCPSKVVCEE 260 (261)
Q Consensus 225 ~~~~~~~lp~~~~LNVN~P~~~~-~~kg~k~t~~~~~ 260 (261)
+..+|++++||||||.++. ++||+|+||..+.
T Consensus 148 ----~~~lp~~~~lNVN~P~~~~~~~kg~~~tr~g~~ 180 (254)
T 2v4n_A 148 ----REPLRTGRILNVNVPDLPLAQVKGIRVTRCGSR 180 (254)
T ss_dssp ----HSCCCSCSEEEEEECSSCGGGCCCEEECBCCEE
T ss_pred ----HcCCCccceEEecCCCCCcccCCceEEEECCcc
Confidence 4678999999999999875 6999999999763
No 6
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=4.8e-63 Score=446.23 Aligned_cols=176 Identities=35% Similarity=0.512 Sum_probs=158.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeC----CceeEEecCChHHHH
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN----GATAYEVSGTPVDCV 142 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~----g~~~y~V~GTPaDCV 142 (261)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 799999999999999999999999877 99999999999999999999999999998643 335799999999999
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecccCCCCCCccHHHHHHHHHHHHHH
Q 024878 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINA 222 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~ 222 (261)
++||+ | +.+|||||||||+|.|+|.+++|||||||||||+++||||||||+.... ...+|+.|++++.+|+++
T Consensus 79 ~lal~--l--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~---~~~~~~~aa~~~~~li~~ 151 (244)
T 2e6c_A 79 ALGLH--L--FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG---EVPDFAGLRPWLLRTLET 151 (244)
T ss_dssp HHHHH--H--SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS---SCCCHHHHHHHHHHHHHH
T ss_pred HHHHc--C--CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEeccCCC---CCCCHHHHHHHHHHHHHH
Confidence 99999 4 3589999999999999999999999999999999999999999996321 124899999999999888
Q ss_pred HHHHhhcCCCCCCcEEEecCCCCCCCCCCeeEeeeeec
Q 024878 223 ATRDIGKGIFPRSCLLNVEIPTSPLTNKVCPSKVVCEE 260 (261)
Q Consensus 223 l~~~~~~~~lp~~~~LNVN~P~~~~~~kg~k~t~~~~~ 260 (261)
++ +. |++++|||||| .++||+|+|++++.
T Consensus 152 l~----~~--p~~~~lNVN~P---~~~~g~~~tr~g~~ 180 (244)
T 2e6c_A 152 LL----RL--ERPFLVNVNLP---LRPKGFLWTRQSVR 180 (244)
T ss_dssp HT----TS--CSSCEEEEECC---SSCCEEEECBCCCC
T ss_pred HH----hC--CcCcEEEeeCC---CccCCeEEEECCCC
Confidence 75 33 88999999999 56899999998764
No 7
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=4.5e-63 Score=454.14 Aligned_cols=184 Identities=28% Similarity=0.375 Sum_probs=163.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~laL 146 (261)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 799999999999999999999999987 999999999999999999999999999987555567999999999999999
Q ss_pred hcccCCCCCCcEEEecCCCCCCCCCc-ccccchHHHHHHHHHcCCCeeEEeecccCCCCC---CccHHHHHHHHHHHHHH
Q 024878 147 SGALFSWSKPLLVISGINRGSSCGHH-MFYSGVVAGAREALICGVPSLSISLNWKKDESQ---ESDFKDAVSVCLPLINA 222 (261)
Q Consensus 147 ~~~l~~~~~PDLVISGIN~G~N~G~~-v~ySGTVgAA~EA~~~GIPAIAvS~~~~~~~~~---~~d~~~aa~~~~~li~~ 222 (261)
+++ +.+|||||||||+|.|+|.+ ++|||||||||||+++||||||||+.+...... ..+|+.|++++.+|+++
T Consensus 79 ~~l---~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~~~~~~~~~~~~~~~~~aa~~~~~lv~~ 155 (280)
T 1l5x_A 79 FGL---GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIMGAVVSSTASY 155 (280)
T ss_dssp HHH---TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hcC---CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEccccCCCcccccccCHHHHHHHHHHHHHH
Confidence 985 36899999999999999999 999999999999999999999999964211100 13799999999999988
Q ss_pred HHHHhhcCCCCCCc-EEEecCCCCCC-CCCCeeEeeeeec
Q 024878 223 ATRDIGKGIFPRSC-LLNVEIPTSPL-TNKVCPSKVVCEE 260 (261)
Q Consensus 223 l~~~~~~~~lp~~~-~LNVN~P~~~~-~~kg~k~t~~~~~ 260 (261)
+++ ..||+++ +||||||.++. ++| +|+||+++.
T Consensus 156 l~~----~~lp~~~d~LNVN~P~~~~~~~k-~~~tr~g~~ 190 (280)
T 1l5x_A 156 VLK----NGMPQGVDVISVNFPRRLGRGVR-AKLVKAAKL 190 (280)
T ss_dssp HHH----HCSCTTCSEEEEEECSCCCTTCC-EEECBCCSC
T ss_pred HHh----cCCCCCCceEEecCCCCCCCCce-EEEEECCCc
Confidence 764 4689999 99999999885 688 999998764
No 8
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=96.20 E-value=0.015 Score=52.48 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=29.0
Q ss_pred cCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEee
Q 024878 61 NVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 61 ~~~~~~~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP 102 (261)
+.+.+.||||++...|. +--....|+++|++.| |+|+|++|
T Consensus 15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 44566799999976432 1123578999999999 89999998
No 9
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=95.89 E-value=0.023 Score=51.11 Aligned_cols=41 Identities=32% Similarity=0.188 Sum_probs=28.3
Q ss_pred CCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 63 DSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
...+||||++..-+. +--.+..|+++|++.| |+|.|+++..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~~ 53 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASEN 53 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEGG
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCHH
Confidence 466799998865321 1123578999999999 8999999843
No 10
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=94.90 E-value=0.016 Score=51.73 Aligned_cols=37 Identities=27% Similarity=0.152 Sum_probs=27.0
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeC
Q 024878 66 KPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 66 ~~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~ 103 (261)
+||||++-.-+. +--.+..|+++|++.| |+|.|+++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 489988765321 1123578999999999 899999874
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=94.81 E-value=0.087 Score=47.36 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=28.7
Q ss_pred cccCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 59 TENVDSSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
+++.+..+||||++.-- +.| ...|+++|++.| |+|+++++..
T Consensus 13 ~~~~~~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 13 GHIEGRHMAHLLIVNVA---SHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp ------CCCEEEEECCS---CHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCcCcccCCEEEEEeCC---CccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 45556677899998742 333 578999999999 8999999654
No 12
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=94.57 E-value=0.1 Score=46.69 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=28.6
Q ss_pred CCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeC
Q 024878 62 VDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 62 ~~~~~~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~ 103 (261)
.+..+||||++.-.+. +.-.+..|+++|++.| |+|.|+++.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 3567799998872211 1112458999999999 899999885
No 13
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.48 E-value=0.42 Score=42.30 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=31.2
Q ss_pred CCCeEEEecCCCCC--Ccc----HHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 65 SKPVLLVTNGDGIE--SPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 65 ~~~~ILlTNDDGi~--SpG----i~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
++||||+..+.-.- .-| +..|+++|.+.| |+|+|++|....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC
Confidence 46899998765332 222 678999999999 899999987654
No 14
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=94.13 E-value=0.11 Score=46.02 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=26.5
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeC
Q 024878 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 67 ~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~ 103 (261)
++||++.--|. +---+..|+++|++.| |+|+++++.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 48988864321 1123678999999999 899999974
No 15
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=93.58 E-value=0.056 Score=49.40 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=26.8
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||++-+... +.-.+.+|+++|++.| |+|+|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 67887764321 1223788999999999 8999999864
No 16
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=93.12 E-value=0.51 Score=42.70 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
+.+|+||+.. +.+.| +..|+++|++.| |+|+++++...+
T Consensus 10 m~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 10 VTPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp -CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred cccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 3457899983 33455 578999999999 899999987653
No 17
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=91.46 E-value=0.86 Score=41.08 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 65 SKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
.+|+||+..- .+.| +..|+++|++.| |+|+++.+...
T Consensus 6 ~m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 6 TPAHIAMFSI---AAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp --CEEEEECC---SCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred ccceEEEEeC---CCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 3478998753 2334 578999999999 89999998763
No 18
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=86.72 E-value=0.66 Score=41.12 Aligned_cols=44 Identities=23% Similarity=0.083 Sum_probs=29.3
Q ss_pred CcccCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 58 STENVDSSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 58 ~~~~~~~~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
.|++.-.+.||||++. +-+.| +.+|+++|++.| |+|+++.+..-
T Consensus 14 g~~~~~~~~MRIL~~~---~p~~GHv~P~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 14 GTENLYFQSMRALFIT---SPGLSHILPTVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp -------CCCEEEEEC---CSSHHHHGGGHHHHHHHHHTT-CEEEEEECSST
T ss_pred CcccCCCCCCeEEEEC---CCchhHHHHHHHHHHHHHHCC-CEEEEEeCcch
Confidence 3445567889999984 22333 568999999999 89999998653
No 19
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=81.77 E-value=0.98 Score=39.16 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=29.8
Q ss_pred CCCeEEEecCC---------------CCC--CccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 65 SKPVLLVTNGD---------------GIE--SPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 65 ~~~~ILlTNDD---------------Gi~--SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
++||||+.+.. .+. ..-+..|+++|.+.| |+|+|+.+....
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 45899998876 111 123577899999999 899999997644
No 20
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=77.48 E-value=8.2 Score=30.10 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=54.4
Q ss_pred cCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHH
Q 024878 61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD 140 (261)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaD 140 (261)
++..+++||||.-||-.....| .+.|.+.| ++|+ .+-.+..+
T Consensus 3 ~m~~r~~rILiVdD~~~~~~~l---~~~L~~~G-~~v~----------------------------------~~a~~g~e 44 (123)
T 2lpm_A 3 HMTERRLRVLVVEDESMIAMLI---EDTLCELG-HEVA----------------------------------ATASRMQE 44 (123)
T ss_dssp CCCCCCCCEEEESSSTTTSHHH---HHHHHHHC-CCCC----------------------------------BCSCCHHH
T ss_pred CCCCCCCEEEEEeCCHHHHHHH---HHHHHHCC-CEEE----------------------------------EEECCHHH
Confidence 6778899999999987665544 45566777 3331 01123344
Q ss_pred HHHHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 141 CVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 141 CV~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
++.+.- ..+|||||.=++...--|..+ +.+-...++|.|.+|..
T Consensus 45 Al~~~~------~~~~DlvllDi~mP~~~G~el--------~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 45 ALDIAR------KGQFDIAIIDVNLDGEPSYPV--------ADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHHHH------HCCSSEEEECSSSSSCCSHHH--------HHHHHHTCCSSCCBCTT
T ss_pred HHHHHH------hCCCCEEEEecCCCCCCHHHH--------HHHHHcCCCCEEEEecC
Confidence 443322 247999999999876555432 22323479999999864
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=76.98 E-value=4.2 Score=36.66 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=22.8
Q ss_pred CCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEe
Q 024878 66 KPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvA 101 (261)
+.||||+-- .+-| -.+|+++|++.| |+|+.+.
T Consensus 2 ~~~i~i~~G---GTgGHi~palala~~L~~~g-~~V~~vg 37 (365)
T 3s2u_A 2 KGNVLIMAG---GTGGHVFPALACAREFQARG-YAVHWLG 37 (365)
T ss_dssp -CEEEEECC---SSHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcEEEEcC---CCHHHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 457999842 2323 368999999999 8998774
No 22
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=75.39 E-value=0.97 Score=39.61 Aligned_cols=42 Identities=10% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCCCeEEEecC----------CCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 64 SSKPVLLVTNG----------DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 64 ~~~~~ILlTND----------DGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
++|.-|++||- +|+...=+..-++.|+++| ++|.++.|....
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 45566788872 4666667788899999999 799999997654
No 23
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=73.80 E-value=2.3 Score=39.20 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCC------------Ccc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 65 SKPVLLVTNGDGIE------------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 65 ~~~~ILlTNDDGi~------------SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
++||||+.++..+- .-| +..|+++|.+.| |+|+|+++...
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 45899999987532 123 577899999999 89999998654
No 24
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=70.81 E-value=3.8 Score=37.34 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=28.5
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
...||||++ +..+.| +.+|+++|++.| |+|+++++..
T Consensus 18 ~~~mrIl~~---~~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~ 58 (441)
T 2yjn_A 18 GSHMRVVFS---SMASKSHLFGLVPLAWAFRAAG-HEVRVVASPA 58 (441)
T ss_dssp -CCCEEEEE---CCSCHHHHTTTHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCccEEEEE---cCCCcchHhHHHHHHHHHHHCC-CeEEEEeCch
Confidence 455899999 333334 578999999999 8999999865
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=70.43 E-value=6.7 Score=34.86 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=30.3
Q ss_pred CCCCCeEEEecCCCCC--------Ccc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 63 DSSKPVLLVTNGDGIE--------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~--------SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
....||||+..++-.- .-| +..|+++|.+.| |+|+|+++...
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 3456899999976432 123 578899999999 89999998753
No 26
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=69.58 E-value=6.3 Score=34.39 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=30.0
Q ss_pred CCCCeEEEecCCCCCC-c----cHHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 64 SSKPVLLVTNGDGIES-P----GLVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~S-p----Gi~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
.++|+||+..+.-... - -+..|+++|.+.| |+|+|+++.....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~ 65 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPHV 65 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTTS
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCccc
Confidence 3568999988643222 2 3567999999999 8999999986543
No 27
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=69.12 E-value=4.4 Score=35.52 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=31.9
Q ss_pred CCCeEEEecC------C----CCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 65 SKPVLLVTNG------D----GIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 65 ~~~~ILlTND------D----Gi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
+|.-|+|||- | |+.-.=+..-++.|+++| ++|.++.|...+
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 3455777882 2 666677888899999999 799999997655
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=69.09 E-value=4.2 Score=35.21 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=26.4
Q ss_pred CCeEEEecCCCCCCccH-H---HHHHHHHhcCCCeEEEEeeCC
Q 024878 66 KPVLLVTNGDGIESPGL-V---YLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi-~---aL~~aL~~~G~~~V~VvAP~~ 104 (261)
.||||+.. .|. .|. + .|+++|.+.| |+|+|+++..
T Consensus 6 ~mkIl~~~-~~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 6 GKRLMVMA-GGT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp -CEEEEEC-CSS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred CcEEEEEe-CCC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 38999886 233 243 2 7999999999 8999999875
No 29
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=66.74 E-value=3.4 Score=37.69 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=28.2
Q ss_pred CeEEEecCCCCC---Ccc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGIE---SPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi~---SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||+..+.-.- .-| +..|+++|.+.| |+|+|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 789988875431 223 577899999999 8999999964
No 30
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=66.04 E-value=6.4 Score=37.84 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=29.6
Q ss_pred cCCCCCCeEEEecCC-C--CCCccH----HHHHHHHHhcCCCeEEEEeeCCC
Q 024878 61 NVDSSKPVLLVTNGD-G--IESPGL----VYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 61 ~~~~~~~~ILlTNDD-G--i~SpGi----~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+...++||||..--- - +.+-|| .+|.++|.+.| |+|.|+.|.-.
T Consensus 4 ~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~ 54 (536)
T 3vue_A 4 HHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYD 54 (536)
T ss_dssp ----CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCS
T ss_pred ccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCch
Confidence 445678999987321 0 112354 68999999999 89999999754
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=65.76 E-value=4.7 Score=34.80 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=27.2
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||+..+.-...-| +..|+++|.+.| |+|+|+++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 678887665332233 678999999999 8999999864
No 32
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=65.72 E-value=3.8 Score=37.31 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=27.9
Q ss_pred CeEEEecCCCC---CCcc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGI---ESPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi---~SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||+..+.-. ..-| +..|+++|.+.| |+|+|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 78888877532 1223 567999999999 8999999964
No 33
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=62.98 E-value=12 Score=33.18 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.7
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+++|+||+.++.. ..-| +..|++.|.+.| |+|.|+.....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC
Confidence 4678999888763 3334 446889999999 89998887643
No 34
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=61.20 E-value=13 Score=31.09 Aligned_cols=42 Identities=17% Similarity=0.300 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
+.-+|||. ||++.+-+ +.++.+.|++.|-..|.+++|-....
T Consensus 119 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~ 161 (208)
T 1wd5_A 119 KGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASPE 161 (208)
T ss_dssp TTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHH
T ss_pred CCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHH
Confidence 44568887 99998754 67888999999977798988866543
No 35
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=59.74 E-value=17 Score=29.85 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=32.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
.++|+|-=-||+....+...++.|++.| .+|.+++|....
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 3455555458999999999999999999 799999998754
No 36
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=59.66 E-value=13 Score=31.43 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=25.8
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCC
Q 024878 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+.|+|||| | +-+| ++|++.|.+.| |+|+++.-..+
T Consensus 2 ~~~~ilVt---G--aG~iG~~l~~~L~~~g-~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIA---G--CGDLGLELARRLTAQG-HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEE---C--CSHHHHHHHHHHHHTT-CCEEEEECTTS
T ss_pred CCCcEEEE---C--CCHHHHHHHHHHHHCC-CEEEEEeCCcc
Confidence 35789999 7 3233 67888998888 79998876543
No 37
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=59.30 E-value=10 Score=32.44 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=23.6
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEe
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvA 101 (261)
||||||=--|+- | +.|++.|.+.| |+|+++.
T Consensus 1 MkILVTGatGfI--G-~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFI--G-TALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHH--H-HHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHH--H-HHHHHHHHHCC-CEEEEEE
Confidence 789999433331 2 67899999999 8999885
No 38
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=58.55 E-value=7.2 Score=35.08 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=26.8
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||++ +..+.| ..+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPA 38 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 678887 233444 578999999999 8999999875
No 39
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=57.00 E-value=11 Score=33.98 Aligned_cols=35 Identities=31% Similarity=0.426 Sum_probs=27.9
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 67 ~~ILlTNDDGi~SpG----i~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
||||++- ..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDC 39 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHH
Confidence 6888883 34455 678999999999 89999998874
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=55.38 E-value=6.7 Score=34.52 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=26.5
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi-~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
||||+...-+. +---+.+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 68999855321 1112468999999999 8999998764
No 41
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=53.72 E-value=23 Score=27.23 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=16.7
Q ss_pred cccCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 024878 59 TENVDSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (261)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G 93 (261)
.++|.++.++|||..||-... ..|.+.|...|
T Consensus 18 ~~~M~~~~~~ILivdd~~~~~---~~l~~~L~~~~ 49 (164)
T 3t8y_A 18 GSHMTDRVIRVLVVDDSAFMR---MVLKDIIDSQP 49 (164)
T ss_dssp ------CCEEEEEECSCHHHH---HHHHHHHHTST
T ss_pred ccccccCccEEEEEcCCHHHH---HHHHHHHhcCC
Confidence 346677788999999984433 33444555543
No 42
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=53.27 E-value=80 Score=27.94 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=29.1
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
...+++|||.+- | .--+.+++++++.| ++|+++-+..+.
T Consensus 8 ~~~~~~ili~g~-g---~~~~~~~~a~~~~G-~~v~~~~~~~~~ 46 (391)
T 1kjq_A 8 RPAATRVMLLGS-G---ELGKEVAIECQRLG-VEVIAVDRYADA 46 (391)
T ss_dssp STTCCEEEEESC-S---HHHHHHHHHHHTTT-CEEEEEESSTTC
T ss_pred CCCCCEEEEECC-C---HHHHHHHHHHHHcC-CEEEEEECCCCC
Confidence 456689999965 3 22467789999999 699999876554
No 43
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=52.68 E-value=4.9 Score=40.81 Aligned_cols=41 Identities=27% Similarity=0.154 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
+.++.-||++..||.+..-+.+++++|+++| .+|.||+|..
T Consensus 528 ~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 528 DGLKVGLLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp TTCEEEEECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred CCCEEEEEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 3344557777779999999999999999999 7999999964
No 44
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=52.64 E-value=9.9 Score=32.54 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=31.2
Q ss_pred CCCeEEEec------C----CCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 65 SKPVLLVTN------G----DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 65 ~~~~ILlTN------D----DGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+|.-|+||+ | ||+.-.-+...++.|++.| ++|.++.|...
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 344566775 2 6777777888999999999 79999999864
No 45
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=52.07 E-value=17 Score=30.20 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=33.5
Q ss_pred CCCeEEEec-----C---CCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 65 SKPVLLVTN-----G---DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 65 ~~~~ILlTN-----D---DGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
++.-||++| | ||+...-+...++.|++.| ++|.+++|....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 345577774 2 8998889999999999999 799999998753
No 46
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=50.21 E-value=33 Score=34.89 Aligned_cols=41 Identities=22% Similarity=0.136 Sum_probs=31.5
Q ss_pred CCCCCCeEEEecCCC-CCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 62 VDSSKPVLLVTNGDG-IESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 62 ~~~~~~~ILlTNDDG-i~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
.+.+|.-||++ || ++..-+..++++|+++| ++|.||+|...
T Consensus 535 l~grKVaILva--dG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 535 IATLRVGVLST--TKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp CTTCEEEEECC--SSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred ccCCEEEEEcc--CCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 33444456665 56 66668999999999999 79999999764
No 47
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=50.09 E-value=19 Score=30.27 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCCccH--HHHHHHHHhcCCCeEEEEeeC
Q 024878 65 SKPVLLVTNGDGIESPGL--VYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi--~aL~~aL~~~G~~~V~VvAP~ 103 (261)
+.|+|||| | + |. ++|++.|.+.| |+|+++.-.
T Consensus 4 m~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp -CCEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred CcCcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 34789999 6 4 54 67889998888 799888643
No 48
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=48.20 E-value=17 Score=29.58 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=30.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
.-||+. ||+.-..+...++.|++.| ++|.+++|..
T Consensus 8 v~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 8 ALVILA--PGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEEEC--CCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 335554 8999999999999999999 7999999986
No 49
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=47.60 E-value=10 Score=30.03 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=31.5
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
.++|++-=-||+....+...++.|+..| ++|.+++|..
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 3555555567999999999999999999 7999999975
No 50
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=45.61 E-value=5.6 Score=32.96 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=31.6
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
..+-+|+|-=.||++--=+..-++.|+++| ++|.++.|...
T Consensus 6 ~t~~~v~il~~~gFe~~E~~~p~~~l~~ag-~~V~~~s~~~~ 46 (177)
T 4hcj_A 6 KTNNILYVMSGQNFQDEEYFESKKIFESAG-YKTKVSSTFIG 46 (177)
T ss_dssp CCCEEEEECCSEEECHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred cCCCEEEEECCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 333345555567898878888999999999 79999998754
No 51
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=45.52 E-value=86 Score=25.97 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=44.7
Q ss_pred CCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHH
Q 024878 62 VDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD 140 (261)
Q Consensus 62 ~~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaD 140 (261)
|+.+..+|||| | .+-|| +++++.|.+.| ++|+++.-..+.. + .+...+.+|=+=.+
T Consensus 3 m~l~~k~vlVT---G-as~giG~~ia~~l~~~G-~~V~~~~r~~~~~---------~---------~~~~~~~~D~~d~~ 59 (250)
T 2fwm_X 3 MDFSGKNVWVT---G-AGKGIGYATALAFVEAG-AKVTGFDQAFTQE---------Q---------YPFATEVMDVADAA 59 (250)
T ss_dssp CCCTTCEEEEE---S-TTSHHHHHHHHHHHHTT-CEEEEEESCCCSS---------C---------CSSEEEECCTTCHH
T ss_pred CCCCCCEEEEe---C-CCcHHHHHHHHHHHHCC-CEEEEEeCchhhh---------c---------CCceEEEcCCCCHH
Confidence 33455679999 3 23466 78899999999 7998886543310 0 01223344544344
Q ss_pred HHHHHHhcccCCCCCCcEEEe
Q 024878 141 CVSLALSGALFSWSKPLLVIS 161 (261)
Q Consensus 141 CV~laL~~~l~~~~~PDLVIS 161 (261)
.+.-.+..+.....++|.||.
T Consensus 60 ~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 60 QVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp HHHHHHHHHHHHCSCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEE
Confidence 455455433222347899985
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=45.18 E-value=13 Score=34.15 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=29.0
Q ss_pred CCCCCeEEEecCCCC---CCcc---HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 63 DSSKPVLLVTNGDGI---ESPG---LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi---~SpG---i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
..++|||++.-+.=. ..-| +..|+++|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 357799988765411 1122 567788888899 9999999974
No 53
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=44.17 E-value=15 Score=29.62 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=32.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+.++|+|-=-||+....+...++.|+..| ++|.+++|...
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 33455544458999889999999999999 79999999864
No 54
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.95 E-value=27 Score=30.07 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=27.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
+|+|||.... --+.+++++++.| ++|+++.|..+
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCCC
Confidence 5889999765 3467889999999 79999988754
No 55
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=41.45 E-value=68 Score=26.69 Aligned_cols=48 Identities=15% Similarity=0.085 Sum_probs=27.8
Q ss_pred hHHHHHHHHHcCCCeeEEeecccC-CCCCCccHHH----HHHHHHHHHHHHHH
Q 024878 178 VVAGAREALICGVPSLSISLNWKK-DESQESDFKD----AVSVCLPLINAATR 225 (261)
Q Consensus 178 TVgAA~EA~~~GIPAIAvS~~~~~-~~~~~~d~~~----aa~~~~~li~~l~~ 225 (261)
+.|-|.-|..+|+|.++|..=.+. +.....+|++ |++.+.+++..+++
T Consensus 180 ~aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~Aa~~~a~~v~~~l~ 232 (236)
T 4g41_A 180 GAAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFLE 232 (236)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666889999999753221 2223455664 45555566666554
No 56
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.78 E-value=18 Score=30.82 Aligned_cols=83 Identities=16% Similarity=0.030 Sum_probs=45.8
Q ss_pred cCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChH
Q 024878 61 NVDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPV 139 (261)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPa 139 (261)
.|+.+..+||||= .+-|| +++++.|.+.| ++|+++.-..++- -.. +...+...+.+|=+=.
T Consensus 22 ~m~l~~k~vlVTG----as~gIG~aia~~l~~~G-~~V~~~~r~~~~~--~~~-----------~~~~~~~~~~~Dv~~~ 83 (260)
T 3gem_A 22 HMTLSSAPILITG----ASQRVGLHCALRLLEHG-HRVIISYRTEHAS--VTE-----------LRQAGAVALYGDFSCE 83 (260)
T ss_dssp -----CCCEEESS----TTSHHHHHHHHHHHHTT-CCEEEEESSCCHH--HHH-----------HHHHTCEEEECCTTSH
T ss_pred CcCCCCCEEEEEC----CCCHHHHHHHHHHHHCC-CEEEEEeCChHHH--HHH-----------HHhcCCeEEECCCCCH
Confidence 4555667899993 23466 68899999999 7999887544321 000 0001233455665545
Q ss_pred HHHHHHHhcccCCCCCCcEEEe
Q 024878 140 DCVSLALSGALFSWSKPLLVIS 161 (261)
Q Consensus 140 DCV~laL~~~l~~~~~PDLVIS 161 (261)
+.+.-.+..+.....++|.||.
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 84 TGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEE
Confidence 5555555543222347999985
No 57
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=40.07 E-value=48 Score=31.26 Aligned_cols=43 Identities=21% Similarity=0.156 Sum_probs=28.5
Q ss_pred CCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeecc
Q 024878 155 KPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNW 199 (261)
Q Consensus 155 ~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~ 199 (261)
.-||||.| .|.--.....=.-.+|-|+.|.-+|+|.|||.-..
T Consensus 287 ~ADLVITG--EG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~~ 329 (383)
T 3cwc_A 287 DADLVITG--EGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSL 329 (383)
T ss_dssp HCSEEEEC--CEESCC----CHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCCEEEEC--CCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCCC
Confidence 57999998 33332222222334688999999999999998643
No 58
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=39.94 E-value=18 Score=31.30 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=23.4
Q ss_pred cccCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEE
Q 024878 59 TENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (261)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~V 99 (261)
-|.|++..++||||= -.+.-..|.+.|++.| ++|+.
T Consensus 7 ~~~~~~~g~~IlvTR----p~~~a~~l~~~L~~~G-~~~~~ 42 (269)
T 3re1_A 7 HHSMDMSAWRLLLTR----PAEESAALARVLADAG-IFSSS 42 (269)
T ss_dssp ------CCCEEEECS----CHHHHHHHHHHHHTTT-CEEEE
T ss_pred ccccccCCCEEEEeC----ChHHHHHHHHHHHHCC-CCEEE
Confidence 356788999999993 2345678999999999 56644
No 59
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=39.01 E-value=1.4e+02 Score=25.76 Aligned_cols=81 Identities=14% Similarity=0.095 Sum_probs=49.1
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHH
Q 024878 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDC 141 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDC 141 (261)
+-+.-.+||| | .+.|| +++++.|.+.| ++|++++-..++.. . + ...+.+|=|=.+.
T Consensus 8 ~L~GK~alVT---G-as~GIG~aia~~la~~G-a~V~~~~r~~~~~~-~------~-----------~~~~~~Dv~~~~~ 64 (261)
T 4h15_A 8 NLRGKRALIT---A-GTKGAGAATVSLFLELG-AQVLTTARARPEGL-P------E-----------ELFVEADLTTKEG 64 (261)
T ss_dssp CCTTCEEEES---C-CSSHHHHHHHHHHHHTT-CEEEEEESSCCTTS-C------T-----------TTEEECCTTSHHH
T ss_pred CCCCCEEEEe---c-cCcHHHHHHHHHHHHcC-CEEEEEECCchhCC-C------c-----------EEEEEcCCCCHHH
Confidence 3455679999 3 45588 78999999999 79999875443211 1 1 1124455444444
Q ss_pred HHHHHhcccCCCCCCcEEEe--cCCCC
Q 024878 142 VSLALSGALFSWSKPLLVIS--GINRG 166 (261)
Q Consensus 142 V~laL~~~l~~~~~PDLVIS--GIN~G 166 (261)
+.-.+..+.-...+.|.+|. |+...
T Consensus 65 v~~~~~~~~~~~G~iDilVnnAG~~~~ 91 (261)
T 4h15_A 65 CAIVAEATRQRLGGVDVIVHMLGGSSA 91 (261)
T ss_dssp HHHHHHHHHHHTSSCSEEEECCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCcc
Confidence 55555543322357999985 65543
No 60
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=38.39 E-value=18 Score=32.33 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=23.9
Q ss_pred CcccCCCCCCeEEEecCC----CCCCccHHHHHHHHHhcCCCeEEEE
Q 024878 58 STENVDSSKPVLLVTNGD----GIESPGLVYLVEALVREGLYNVHVC 100 (261)
Q Consensus 58 ~~~~~~~~~~~ILlTNDD----Gi~SpGi~aL~~aL~~~G~~~V~Vv 100 (261)
.|.+.-++.|+|||-|-. +....=..+..+.|++.| |+|.|+
T Consensus 14 ~t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 14 GTENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp --------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 344566888999999754 222222456678888888 899887
No 61
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=37.95 E-value=8 Score=33.46 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=24.5
Q ss_pred CCCCeEEEecCCCC-CCcc----HHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 64 SSKPVLLVTNGDGI-ESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 64 ~~~~~ILlTNDDGi-~SpG----i~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
+++||||+..+.=. ..-| +..|++.| .| |+|+|+++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~ 46 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNA 46 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCc
Confidence 45788888765322 2234 44555556 36 899999998753
No 62
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=37.20 E-value=46 Score=29.41 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=26.3
Q ss_pred CCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 75 DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 75 DGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
||+.-.-+...++.|++.| ++|.++.|....
T Consensus 71 ~G~~~~E~~~p~~vL~~ag-~~v~i~S~~g~~ 101 (291)
T 1n57_A 71 TGNHPIETLLPLYHLHAAG-FEFEVATISGLM 101 (291)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CCEEEEESSSCC
T ss_pred CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 4777778888999999999 799999998754
No 63
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=36.66 E-value=24 Score=29.31 Aligned_cols=36 Identities=33% Similarity=0.492 Sum_probs=29.9
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 68 ~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
+|++-=-||+...-+...++.|+..| ++|.+++|..
T Consensus 11 ~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 11 RILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred eEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 44444447999999999999999999 7999999974
No 64
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=36.56 E-value=1.9e+02 Score=24.22 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=26.5
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCC
Q 024878 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
.+..+||||= .+-|| +++++.|.+.| ++|+++.-..
T Consensus 26 ~~~k~vlVTG----as~gIG~aia~~l~~~G-~~V~~~~r~~ 62 (260)
T 3un1_A 26 NQQKVVVITG----ASQGIGAGLVRAYRDRN-YRVVATSRSI 62 (260)
T ss_dssp TTCCEEEESS----CSSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred cCCCEEEEeC----CCCHHHHHHHHHHHHCC-CEEEEEeCCh
Confidence 3456799993 23466 68899999999 7999887543
No 65
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=35.38 E-value=28 Score=29.84 Aligned_cols=30 Identities=33% Similarity=0.344 Sum_probs=24.5
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCCeEEEEe
Q 024878 71 VTNGDGIES--PGLVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 71 lTNDDGi~S--pGi~aL~~aL~~~G~~~V~VvA 101 (261)
=.||||--+ .|...| +.|+..+..+|.||.
T Consensus 59 ~~~DDGEp~GTAG~piL-~~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPIL-HAIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHH-HHHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHH-HHHHHcCCCcEEEEE
Confidence 469999877 998888 678888888888763
No 66
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=35.25 E-value=39 Score=27.76 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=32.2
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
.|+|.-|||. ||++.-=+..-++.|+++| .+|.++.+...+.
T Consensus 3 ~M~kV~ill~--dGfe~~E~~~p~~vl~~ag-~~v~~~s~~~~~~ 44 (194)
T 4gdh_A 3 HMVKVCLFVA--DGTDEIEFSAPWGIFKRAE-IPIDSVYVGENKD 44 (194)
T ss_dssp --CCEEEEEE--TTCCHHHHHHHHHHHHHTT-CCEEEEEESSCTT
T ss_pred CCCEEEEEEC--CCcCHHHHHHHHHHHHHCC-CeEEEEEEcCCCC
Confidence 3556668887 6898777888899999999 6999998876543
No 67
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=35.18 E-value=64 Score=27.76 Aligned_cols=36 Identities=31% Similarity=0.303 Sum_probs=24.9
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhc-CCCeEEEEeeCC
Q 024878 64 SSKPVLLVTNGDGIESPGLVYLVEALVRE-GLYNVHVCAPQS 104 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi~aL~~aL~~~-G~~~V~VvAP~~ 104 (261)
+++|+|||++-.+. ..|+++|++. |.++|+++-+..
T Consensus 2 m~~~~Ili~g~g~~-----~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-----AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC-----HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch-----HHHHHHHHHhcCCCEEEEEeCCC
Confidence 46789999965443 4788888877 325777775543
No 68
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=34.56 E-value=29 Score=30.34 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=24.7
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCCeEEEEe
Q 024878 71 VTNGDGIES--PGLVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 71 lTNDDGi~S--pGi~aL~~aL~~~G~~~V~VvA 101 (261)
=.||||--+ .|..-| +.|+..+..||.||.
T Consensus 71 ~~sDDGEp~GTAG~piL-~~L~~~~l~nv~vVV 102 (217)
T 1vi7_A 71 GFSDDGEPAGTAGKPML-AQLMGSGVGEITAVV 102 (217)
T ss_dssp EEECTTSCTTSSSHHHH-HHHHHHTCCSEEEEC
T ss_pred ccCCCCCCCCcchHHHH-HHHHHcCCCCEEEEE
Confidence 369999877 998888 678888888988874
No 69
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=34.03 E-value=42 Score=27.27 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=30.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
.-||+. ||+....+...++.|+..| ++|.+++|...
T Consensus 6 v~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 41 (197)
T 2rk3_A 6 ALVILA--KGAEEMETVIPVDVMRRAG-IKVTVAGLAGK 41 (197)
T ss_dssp EEEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEETTCS
T ss_pred EEEEEC--CCCcHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 335554 8999999999999999999 79999999764
No 70
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=33.99 E-value=34 Score=26.71 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=25.0
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHH--HHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREA--LICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA--~~~GIPAIAvS~~ 198 (261)
.+|||||.-++.-.=-|.. +-..+.+ ....+|.|.+|..
T Consensus 56 ~~~DlillD~~MP~mdG~e------l~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGID------LLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHH------HHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHH------HHHHHHhCCCCCCCeEEEEECC
Confidence 3699999999885433332 2223322 2357999999974
No 71
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=33.54 E-value=27 Score=28.82 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=29.7
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 68 ~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
-||++ ||+.-..+...++.|+..| ++|.+++|...
T Consensus 6 ~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 6 LVCLA--PGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEEc--CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 35555 7898889999999999999 79999999875
No 72
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=33.49 E-value=94 Score=28.46 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=25.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
.+|||+|-.. -+ ..+++++++.| ++|+++.+..+.
T Consensus 7 k~ILI~g~g~---~~-~~i~~a~~~~G-~~vv~v~~~~~~ 41 (461)
T 2dzd_A 7 RKVLVANRGE---IA-IRVFRACTELG-IRTVAIYSKEDV 41 (461)
T ss_dssp SEEEECSCHH---HH-HHHHHHHHHHT-CEEEEEECGGGT
T ss_pred cEEEEECCcH---HH-HHHHHHHHHcC-CEEEEEECCccc
Confidence 4799998532 12 45778999999 799998876554
No 73
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=33.32 E-value=28 Score=28.45 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=33.3
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCcc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qSg 108 (261)
+.-+|||. ||.+.+-+ +.++.+.|++.|...|.++++..-..+
T Consensus 97 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 97 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 34578888 99998755 678889999998778888888755444
No 74
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=33.30 E-value=33 Score=30.01 Aligned_cols=36 Identities=8% Similarity=-0.066 Sum_probs=27.6
Q ss_pred CCCeEEEecCCCCCCcc---HHHHHHHHHhcCCCeEEEEe
Q 024878 65 SKPVLLVTNGDGIESPG---LVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG---i~aL~~aL~~~G~~~V~VvA 101 (261)
.+|+|-|-+|+++.-.. ...|.+.|++.| |+|+=+-
T Consensus 2 ~~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G 40 (214)
T 3ono_A 2 NAMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVG 40 (214)
T ss_dssp CCCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECS
T ss_pred CccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcC
Confidence 35899999999955454 337999999999 7886553
No 75
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=33.20 E-value=1.8e+02 Score=23.06 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=57.8
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCCh-HHHHHHH
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTP-VDCVSLA 145 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTP-aDCV~la 145 (261)
|+||||=--|. -| ++|++.|.+.| ++|+++.-..++-. .+ ..++ .+..|=+= .+.+
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~~-----~~-~~~~----------~~~~D~~d~~~~~--- 57 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQVP-----QY-NNVK----------AVHFDVDWTPEEM--- 57 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGSC-----CC-TTEE----------EEECCTTSCHHHH---
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccchh-----hc-CCce----------EEEecccCCHHHH---
Confidence 57999933332 12 67888898888 79988864332110 00 1222 22233221 2222
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCee-EEeec
Q 024878 146 LSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSL-SISLN 198 (261)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAI-AvS~~ 198 (261)
..++ ..+|.||.-.-....--..+..-||.-.+..+...|++-| -+|..
T Consensus 58 -~~~~---~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 58 -AKQL---HGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp -HTTT---TTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred -HHHH---cCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 3322 2589999644433322335677888877776667788644 45543
No 76
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=32.76 E-value=1.2e+02 Score=25.64 Aligned_cols=76 Identities=20% Similarity=0.269 Sum_probs=43.9
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHH
Q 024878 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDC 141 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDC 141 (261)
..+..+||||= .+-|| +++++.|.+.| ++|+++.-..+.. .. ....+.+|=+=.+.
T Consensus 11 ~~~~k~vlVTG----as~GIG~aia~~l~~~G-~~V~~~~r~~~~~--------~~----------~~~~~~~Dv~~~~~ 67 (269)
T 3vtz_A 11 EFTDKVAIVTG----GSSGIGLAVVDALVRYG-AKVVSVSLDEKSD--------VN----------VSDHFKIDVTNEEE 67 (269)
T ss_dssp TTTTCEEEESS----TTSHHHHHHHHHHHHTT-CEEEEEESCC--C--------TT----------SSEEEECCTTCHHH
T ss_pred CCCCCEEEEeC----CCCHHHHHHHHHHHHCC-CEEEEEeCCchhc--------cC----------ceeEEEecCCCHHH
Confidence 34556799993 33477 68999999999 7898876443221 00 11234455443444
Q ss_pred HHHHHhcccCCCCCCcEEEe
Q 024878 142 VSLALSGALFSWSKPLLVIS 161 (261)
Q Consensus 142 V~laL~~~l~~~~~PDLVIS 161 (261)
+.-.+..+.....++|+||.
T Consensus 68 v~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 68 VKEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp HHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEE
Confidence 44444433211247999986
No 77
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=32.57 E-value=2e+02 Score=29.35 Aligned_cols=40 Identities=10% Similarity=0.294 Sum_probs=27.7
Q ss_pred CCCCeEEEecCCCC----------CCcc----HH--------HHHHHHHhcCCCeEE----EEeeCC
Q 024878 64 SSKPVLLVTNGDGI----------ESPG----LV--------YLVEALVREGLYNVH----VCAPQS 104 (261)
Q Consensus 64 ~~~~~ILlTNDDGi----------~SpG----i~--------aL~~aL~~~G~~~V~----VvAP~~ 104 (261)
++.++|++-++.|+ ++-| +. .|+++|.+.| |+|+ |+....
T Consensus 276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G-~~V~~~V~v~Tr~~ 341 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQG-LNIKPRILILTRLL 341 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCEEEEEEECC
T ss_pred CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCC-CccceeeEEEeCCC
Confidence 56789999999997 3334 22 3555677889 7775 775553
No 78
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=32.43 E-value=79 Score=26.29 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=30.6
Q ss_pred hHHHHHHHHHcCCCeeEEeecccC-CCCCCccHH----HHHHHHHHHHHHHHHHhh
Q 024878 178 VVAGAREALICGVPSLSISLNWKK-DESQESDFK----DAVSVCLPLINAATRDIG 228 (261)
Q Consensus 178 TVgAA~EA~~~GIPAIAvS~~~~~-~~~~~~d~~----~aa~~~~~li~~l~~~~~ 228 (261)
+.+-|.-|..+|+|.+++..=.+. +.....+|+ .|++.+.+++.++++.+.
T Consensus 177 ~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~~l~ 232 (234)
T 3o4v_A 177 ATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLA 232 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455566667789999999753221 122223454 356666777777776543
No 79
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=32.15 E-value=33 Score=29.04 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
+.-+|||. ||.+.+-+ ++++.+.|++.|...|.++++-.-++
T Consensus 125 ~gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 125 TGKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp TTSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 34468887 99998855 67888999998877888888755333
No 80
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=31.80 E-value=58 Score=27.00 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=29.0
Q ss_pred eEEEecCCCCCCccHHHHHHHHH--------hcCCCeEEEEeeCCC
Q 024878 68 VLLVTNGDGIESPGLVYLVEALV--------REGLYNVHVCAPQSD 105 (261)
Q Consensus 68 ~ILlTNDDGi~SpGi~aL~~aL~--------~~G~~~V~VvAP~~~ 105 (261)
+|++-=-||+.---+...++.|+ +.+ ++|.+++|...
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 34444457899889999999999 666 79999999764
No 81
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=31.43 E-value=1.3e+02 Score=25.24 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=42.9
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 024878 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~ 143 (261)
+..+||||=- +-|| +++++.|.+.| ++|+++.-..++ ... ...+.+|=+=.+.+.
T Consensus 7 ~~k~vlVTGa----s~gIG~~ia~~l~~~G-~~V~~~~r~~~~---------~~~----------~~~~~~Dl~~~~~v~ 62 (264)
T 2dtx_A 7 RDKVVIVTGA----SMGIGRAIAERFVDEG-SKVIDLSIHDPG---------EAK----------YDHIECDVTNPDQVK 62 (264)
T ss_dssp TTCEEEEESC----SSHHHHHHHHHHHHTT-CEEEEEESSCCC---------SCS----------SEEEECCTTCHHHHH
T ss_pred CCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEecCccc---------CCc----------eEEEEecCCCHHHHH
Confidence 4467999932 3466 68899999999 799888755443 111 122344433344444
Q ss_pred HHHhcccCCCCCCcEEEe
Q 024878 144 LALSGALFSWSKPLLVIS 161 (261)
Q Consensus 144 laL~~~l~~~~~PDLVIS 161 (261)
-++..+.....++|.||.
T Consensus 63 ~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 63 ASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp HHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHcCCCCEEEE
Confidence 444433211246899985
No 82
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=31.25 E-value=51 Score=28.51 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=29.9
Q ss_pred eEEEec---CCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 68 VLLVTN---GDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 68 ~ILlTN---DDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
-|||+| =||+.-.-+...++.|+++| ++|.+++|...+
T Consensus 27 ~ill~~~~~~dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 27 AVILAGCGHMDGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp EEECCCSSTTTSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred EEEEecCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 355553 16787777888899999999 799999998754
No 83
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=30.93 E-value=42 Score=30.46 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=31.8
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
.+|+|-=-||+.-.-+...++.|++.| ++|.+++|...+
T Consensus 206 ~ki~ill~dg~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 244 (396)
T 3uk7_A 206 KRILFLCGDYMEDYEVKVPFQSLQALG-CQVDAVCPEKKA 244 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHHT-CEEEEECTTCCT
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHCC-CEEEEECCCCCC
Confidence 445444458999888999999999999 799999998754
No 84
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=30.92 E-value=32 Score=28.58 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=33.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCcc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qSg 108 (261)
+.-+|||. ||.+.+-+ +.+..+.|++.|...|.++++..-..+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 160 (205)
T 1yfz_A 117 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 160 (205)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CcCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 34578888 99998765 678889999998778888888755444
No 85
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=30.89 E-value=68 Score=26.07 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=24.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEee
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP 102 (261)
+|+|+|. |.|. .+...++++|++.| .++.++-+
T Consensus 2 ~~~I~ii-d~~~--~~~~~~~~~l~~~G-~~~~~~~~ 34 (200)
T 1ka9_H 2 RMKALLI-DYGS--GNLRSAAKALEAAG-FSVAVAQD 34 (200)
T ss_dssp -CEEEEE-CSSC--SCHHHHHHHHHHTT-CEEEEESS
T ss_pred ccEEEEE-eCCC--ccHHHHHHHHHHCC-CeEEEecC
Confidence 4688888 5553 46677899999999 68887743
No 86
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=30.68 E-value=32 Score=29.38 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=33.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCcc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qSg 108 (261)
+.-+|||. ||.+.+-+ +.++.+.|++.|-..|.++++..-..+
T Consensus 102 ~Gk~VLLV-DDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 102 EGHHVLIV-EDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG 145 (220)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 44578888 99998754 678999999998778888888755444
No 87
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=30.56 E-value=32 Score=29.23 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
+.-+|||. ||.+.+-+ ++++.+.|++.|-..|.++++-.-++
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 44578888 99998855 67888999999877888888865444
No 88
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=30.41 E-value=32 Score=29.00 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred CeEEEecC---CCCCCccHHHHHHHHHhcCCCeEEEEeeCCC
Q 024878 67 PVLLVTNG---DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (261)
Q Consensus 67 ~~ILlTND---DGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~ 105 (261)
.-||++|- ||+.-.-+...++.|++.| ++|.+++|...
T Consensus 9 v~ill~~~~~~~g~~~~E~~~p~~~l~~ag-~~v~~~s~~g~ 49 (232)
T 1vhq_A 9 IGVILSGCGVYDGSEIHEAVLTLLAISRSG-AQAVCFAPDKQ 49 (232)
T ss_dssp EEEECCSBSTTTSBCHHHHHHHHHHHHHTT-CEEEEEECSSB
T ss_pred EEEEEccCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 34555542 6888888999999999999 79999999864
No 89
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=30.23 E-value=33 Score=28.89 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=33.3
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCcc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qSg 108 (261)
+.-+|||. ||.+.+-+ ++++.+.|++.|-..|.++++..-..+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 44578888 99998755 678999999998778888888765444
No 90
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=30.22 E-value=58 Score=23.16 Aligned_cols=38 Identities=21% Similarity=0.103 Sum_probs=22.4
Q ss_pred CCcEEEecCCCCC-CCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 155 KPLLVISGINRGS-SCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 155 ~PDLVISGIN~G~-N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
+||+||..++... -.|.+ +-..+......+|.|.+|..
T Consensus 50 ~~dlvi~d~~l~~~~~g~~------~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQ------VARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp CCCEEEEESCCSSSSCHHH------HHHHHHHHCTTCCEEEEESS
T ss_pred CCCEEEEeeeCCCCCCHHH------HHHHHHhcCCCCCEEEEeCC
Confidence 6899998887643 22221 22222233457888888864
No 91
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=30.05 E-value=47 Score=24.32 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=23.8
Q ss_pred CCCcEEEecCCCCC-CCCCcccccchHHHHHHHHHcCCCeeEEeecc
Q 024878 154 SKPLLVISGINRGS-SCGHHMFYSGVVAGAREALICGVPSLSISLNW 199 (261)
Q Consensus 154 ~~PDLVISGIN~G~-N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~~ 199 (261)
..|||||..++... -.|.++ +-..++ ...+|.|.+|...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~-----~~~l~~--~~~~~ii~ls~~~ 88 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQT-----ALAIQQ--ISELPVVFLTAHT 88 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHH-----HHHHHH--HCCCCEEEEESSS
T ss_pred CCCCEEEEeccCCCCCCHHHH-----HHHHHh--CCCCCEEEEECCC
Confidence 46999999998742 222221 112222 2689999999753
No 92
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=29.93 E-value=35 Score=28.21 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=18.7
Q ss_pred cchHHHHHHHHHcCCCeeEEeeccc
Q 024878 176 SGVVAGAREALICGVPSLSISLNWK 200 (261)
Q Consensus 176 SGTVgAA~EA~~~GIPAIAvS~~~~ 200 (261)
.||=|..+..+..|||++.++....
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~~ 319 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPIR 319 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEEB
T ss_pred cccHHHHHHHhcCCCCEEEECcccC
Confidence 4676666666678999999997644
No 93
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.84 E-value=52 Score=25.26 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeC
Q 024878 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~ 103 (261)
.+.+|+|. |...-| +.+++.|.+.| ++|+++.+.
T Consensus 2 ~~~~vlI~---G~G~vG-~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVC---GHSILA-INTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CCSCEEEE---CCSHHH-HHHHHHHHHTT-CCEEEEECC
T ss_pred CCCcEEEE---CCCHHH-HHHHHHHHHCC-CCEEEEECC
Confidence 34568888 665556 56778898888 799999875
No 94
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=29.82 E-value=62 Score=25.25 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=25.3
Q ss_pred CCCeEEEec--CCCCCCccHHHHHHHHHhcCCCeEE
Q 024878 65 SKPVLLVTN--GDGIESPGLVYLVEALVREGLYNVH 98 (261)
Q Consensus 65 ~~~~ILlTN--DDGi~SpGi~aL~~aL~~~G~~~V~ 98 (261)
++++|||.. .| ++.-|+.-+...|+..| ++|+
T Consensus 2 ~~~~vvla~~~~d-~HdiG~~~v~~~l~~~G-~~Vi 35 (137)
T 1ccw_A 2 EKKTIVLGVIGSD-CHAVGNKILDHAFTNAG-FNVV 35 (137)
T ss_dssp CCCEEEEEEETTC-CCCHHHHHHHHHHHHTT-CEEE
T ss_pred CCCEEEEEeCCCc-hhHHHHHHHHHHHHHCC-CEEE
Confidence 457777774 44 88899999999999999 5764
No 95
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.44 E-value=45 Score=24.86 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=47.0
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV 142 (261)
..++++|||..||... ...|.+.|...| ++| + .-.++.++.
T Consensus 11 ~~~~~~ILivdd~~~~---~~~l~~~L~~~g-~~v----------------------------------~-~~~~~~~a~ 51 (153)
T 3hv2_A 11 VTRRPEILLVDSQEVI---LQRLQQLLSPLP-YTL----------------------------------H-FARDATQAL 51 (153)
T ss_dssp CCSCCEEEEECSCHHH---HHHHHHHHTTSS-CEE----------------------------------E-EESSHHHHH
T ss_pred ccCCceEEEECCCHHH---HHHHHHHhcccC-cEE----------------------------------E-EECCHHHHH
Confidence 3456899999998543 334455565555 222 1 123455554
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
...-. .+|||||..++...-.|.++ -..+......+|.|.+|..
T Consensus 52 ~~l~~------~~~dlvi~D~~l~~~~g~~~------~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 52 QLLAS------REVDLVISAAHLPQMDGPTL------LARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp HHHHH------SCCSEEEEESCCSSSCHHHH------HHHHHHHCTTSEEEEECCC
T ss_pred HHHHc------CCCCEEEEeCCCCcCcHHHH------HHHHHhHCCCCeEEEEECC
Confidence 43321 36899999888764333221 1122223456788877753
No 96
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=29.31 E-value=43 Score=26.48 Aligned_cols=34 Identities=29% Similarity=0.227 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCeEEEEe
Q 024878 65 SKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG--i~aL~~aL~~~G~~~V~VvA 101 (261)
.+.-|||| ||....+ +...++.|++.| -.|++++
T Consensus 123 ~~~iillT--DG~~~~~~~~~~~~~~l~~~g-i~v~~ig 158 (178)
T 2xgg_A 123 PKLVIGMT--DGESDSDFRTVRAAKEIRELG-GIVTVLA 158 (178)
T ss_dssp CEEEEEEE--SSCCCHHHHHSHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEE
Confidence 44558888 6777777 888889999888 4777664
No 97
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=28.81 E-value=65 Score=25.85 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=28.7
Q ss_pred eEEEecCCCCCCccHHHHHHHHHh-cCCCeEEEEeeCCC
Q 024878 68 VLLVTNGDGIESPGLVYLVEALVR-EGLYNVHVCAPQSD 105 (261)
Q Consensus 68 ~ILlTNDDGi~SpGi~aL~~aL~~-~G~~~V~VvAP~~~ 105 (261)
+|++-=-||+.-.-+...++.|++ .| ++|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 344333478988888889999998 88 79999999864
No 98
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=28.67 E-value=47 Score=26.89 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=32.1
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qS 107 (261)
+.-+|||. ||.+.+-+ +.++.+.|++.|...|.+++.-..+.
T Consensus 94 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 94 EGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 34578887 99998765 67888999999877888888755443
No 99
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=28.50 E-value=25 Score=30.24 Aligned_cols=19 Identities=47% Similarity=0.557 Sum_probs=15.8
Q ss_pred cchHHHHHHHHHcCCCeeEEe
Q 024878 176 SGVVAGAREALICGVPSLSIS 196 (261)
Q Consensus 176 SGTVgAA~EA~~~GIPAIAvS 196 (261)
||++ .+||+.+|+|.|+..
T Consensus 290 sg~~--~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 290 SGGV--QEEAPSLGVPVLVLR 308 (375)
T ss_dssp CHHH--HHHHHHHTCCEEECS
T ss_pred CCCh--HHHHHhcCCCEEEec
Confidence 3655 889999999999873
No 100
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=28.03 E-value=2.1e+02 Score=29.03 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=31.3
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
++|+|-=-||+...-+..++++|+.+| ++|.+|+|....
T Consensus 535 rkVaILl~dGfe~~El~~p~dvL~~AG-~~V~ivS~~gg~ 573 (715)
T 1sy7_A 535 RRVAIIIADGYDNVAYDAAYAAISANQ-AIPLVIGPRRSK 573 (715)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESCSSC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHhcC-CEEEEEECCCCc
Confidence 344433348999999999999999999 799999998753
No 101
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=28.00 E-value=1.6e+02 Score=25.04 Aligned_cols=53 Identities=15% Similarity=-0.006 Sum_probs=31.2
Q ss_pred hHHHHHHHHHcCCCeeEEeec--ccCCCC-CC----ccHHHHHHHHHHHHHHHHHHhhcC
Q 024878 178 VVAGAREALICGVPSLSISLN--WKKDES-QE----SDFKDAVSVCLPLINAATRDIGKG 230 (261)
Q Consensus 178 TVgAA~EA~~~GIPAIAvS~~--~~~~~~-~~----~d~~~aa~~~~~li~~l~~~~~~~ 230 (261)
+.+-|.-|..+|+|.++|..- +-.... .. ..++.+++.+.+++.++++.+..+
T Consensus 190 ~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~~ 249 (254)
T 3bsf_A 190 GAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISGK 249 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 445556667899999998752 211111 11 223556666677777777766443
No 102
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=27.20 E-value=30 Score=30.34 Aligned_cols=105 Identities=19% Similarity=0.099 Sum_probs=69.0
Q ss_pred CccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccC-CCCceE-EE----------------------------------
Q 024878 79 SPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVT-LRETIA-VS---------------------------------- 122 (261)
Q Consensus 79 SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT-~~~pl~-v~---------------------------------- 122 (261)
+++|.+.=+++++. +|-++-+..-+-|.||+.. +...+- +.
T Consensus 48 ~~~I~AaD~A~KaA---~Vel~~~r~~~gg~g~~~~~~~G~~i~iigG~dvs~V~~av~~~~~~~~~~~~~~~~~~~gh~ 124 (220)
T 3u27_C 48 DVTYTALDEATKKA---VVDVAYGKSFYGGAANANTKLAGEVIGILSGPTPAEVKSGLAAAVDFIENEAAFISANDDDSI 124 (220)
T ss_dssp HHHHHHHHHHHHHS---SCEEEEEEECTTCGGGCCSTTTTTEEEEEEESSHHHHHHHHHHHHHHHHHTCCEEECSTTSCC
T ss_pred hHHHHHHHHHHhhc---CeEEEEEeeccccCcccccccCccEEEEecCCCHHHHHHHHHHHHHHHHhhHhheeccCCCCe
Confidence 57888888888774 6888888887777777754 222111 00
Q ss_pred ----Ee-e-----------eCCcee-EEecCChHHHHHHHHhcccCCCCCCcEE-EecCCCCCCCCCcccccchHHHHHH
Q 024878 123 ----SA-E-----------INGATA-YEVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMFYSGVVAGARE 184 (261)
Q Consensus 123 ----~v-~-----------~~g~~~-y~V~GTPaDCV~laL~~~l~~~~~PDLV-ISGIN~G~N~G~~v~ySGTVgAA~E 184 (261)
.+ . .+..++ =.+.++|+ ...+|.+..+. --..+|+ +-.|..|.+.|. ++.+|.|+|..+
T Consensus 125 ~~~ah~ia~~~~al~~~~g~~~g~AiGil~~~p~-~ai~aaD~A~K-aA~V~l~~~~~p~~~~~~~g-~~itGdvsAV~a 201 (220)
T 3u27_C 125 AYFAHCISRTGTYLSKTAGIPEGESLAYLIAPPL-EAMYALDVALK-AADVRLVAFYGPPSETNFGG-GLLTGSQSACKA 201 (220)
T ss_dssp EEEEEEESSCCHHHHHHHTSCTTCCEEEEEESHH-HHHHHHHHHHH-HSSCEEEEEECSCCTTSCEE-EEEESCHHHHHH
T ss_pred EEEEeecCCcHHHHHHhcCCCCcceEEEEEcCCH-HHHHHHHHHHh-hCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHH
Confidence 00 0 001122 35678999 77778787653 2457887 577777777776 889999999888
Q ss_pred HHHcC
Q 024878 185 ALICG 189 (261)
Q Consensus 185 A~~~G 189 (261)
|+..|
T Consensus 202 Av~a~ 206 (220)
T 3u27_C 202 ACDAF 206 (220)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 103
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=26.80 E-value=87 Score=29.41 Aligned_cols=42 Identities=26% Similarity=0.303 Sum_probs=28.0
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
..-||||.| .|.--.....=--.+|-|+.|.- |+|.|+|.-.
T Consensus 277 ~~ADLVITG--EG~~D~QT~~GK~p~gVa~~A~~-~~PviaiaG~ 318 (371)
T 1to6_A 277 SDVDLVIVG--EGRLDRQSLAGKAPIGVAKRTPV-GVPVVAICGS 318 (371)
T ss_dssp TTCSEEEEC--CSEECSTTTTTCHHHHHHTTSCT-TCCEEEEESE
T ss_pred cCCCEEEEC--CCCCCCCCCCCcHHHHHHHHHhc-CCCEEEEeCC
Confidence 468999998 33332222222334577888877 9999999864
No 104
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=26.45 E-value=39 Score=26.29 Aligned_cols=35 Identities=11% Similarity=0.258 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEE
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVC 100 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~Vv 100 (261)
+.-+|||. ||.+.+-+ +.++.+.|++.|...|.++
T Consensus 82 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~ga~~v~~~ 117 (153)
T 1vdm_A 82 KDKRVVIV-DDVSDTGKTLEVVIEEVKKLGAKEIKIA 117 (153)
T ss_dssp BTCEEEEE-EEEESSCHHHHHHHHHHHTTTBSEEEEE
T ss_pred CCCEEEEE-ecccCChHHHHHHHHHHHHcCCCEEEEE
Confidence 34568887 99998754 6788899999885555343
No 105
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=26.19 E-value=2.6e+02 Score=23.26 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=43.4
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 024878 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV 142 (261)
.+..+||||=- +-|| +++++.|.+.| ++|+++.-..++- .+ ...+.+|=+=.+.+
T Consensus 19 l~~k~vlVTGa----s~gIG~aia~~l~~~G-~~V~~~~r~~~~~--------~~-----------~~~~~~Dl~d~~~v 74 (253)
T 2nm0_A 19 HMSRSVLVTGG----NRGIGLAIARAFADAG-DKVAITYRSGEPP--------EG-----------FLAVKCDITDTEQV 74 (253)
T ss_dssp -CCCEEEEETT----TSHHHHHHHHHHHHTT-CEEEEEESSSCCC--------TT-----------SEEEECCTTSHHHH
T ss_pred CCCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEeCChHhh--------cc-----------ceEEEecCCCHHHH
Confidence 34557999932 3477 78999999999 7998876543221 01 12344554444455
Q ss_pred HHHHhcccCCCCCCcEEEe
Q 024878 143 SLALSGALFSWSKPLLVIS 161 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVIS 161 (261)
.-.+..+.....++|.||.
T Consensus 75 ~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 75 EQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp HHHHHHHHHHTCSCSEEEE
T ss_pred HHHHHHHHHHcCCCCEEEE
Confidence 5555443222347899985
No 106
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=26.07 E-value=43 Score=28.69 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCCcc
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~qSg 108 (261)
+.-+|||. ||.+.+-+ ++++.+.|++.|-..|.++++-.-+++
T Consensus 141 ~Gk~VLIV-DDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 141 RDKHVLIV-EDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD 184 (233)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 34578887 99998755 688899999998777888887654444
No 107
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=25.89 E-value=32 Score=29.82 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=16.1
Q ss_pred ccchHHHHHHHHHcCCCeeEEe
Q 024878 175 YSGVVAGAREALICGVPSLSIS 196 (261)
Q Consensus 175 ySGTVgAA~EA~~~GIPAIAvS 196 (261)
.||++ .+||+.+|+|.|+.+
T Consensus 281 ~S~g~--~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 281 DSGGL--QEEGAALGVPVVVLR 300 (376)
T ss_dssp SCHHH--HHHHHHTTCCEEECS
T ss_pred CCcCH--HHHHHHcCCCEEecc
Confidence 35665 669999999999864
No 108
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.86 E-value=96 Score=24.05 Aligned_cols=105 Identities=13% Similarity=0.074 Sum_probs=54.0
Q ss_pred CeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHH
Q 024878 67 PVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA 145 (261)
Q Consensus 67 ~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~la 145 (261)
|+||||=--| +| ++|++.|.+.| ++|+++....++- ..... .+.+.+..|=+=.+.+.-+
T Consensus 4 ~~ilVtGatG----~iG~~l~~~l~~~g-~~V~~~~r~~~~~----~~~~~----------~~~~~~~~D~~~~~~~~~~ 64 (206)
T 1hdo_A 4 KKIAIFGATG----QTGLTTLAQAVQAG-YEVTVLVRDSSRL----PSEGP----------RPAHVVVGDVLQAADVDKT 64 (206)
T ss_dssp CEEEEESTTS----HHHHHHHHHHHHTT-CEEEEEESCGGGS----CSSSC----------CCSEEEESCTTSHHHHHHH
T ss_pred CEEEEEcCCc----HHHHHHHHHHHHCC-CeEEEEEeChhhc----ccccC----------CceEEEEecCCCHHHHHHH
Confidence 7899994333 33 67888888888 8998886533211 00001 1222333443333333333
Q ss_pred HhcccCCCCCCcEEEecCCCCCC-CCCcccccchHHHHHHHHHcCCCee-EEee
Q 024878 146 LSGALFSWSKPLLVISGINRGSS-CGHHMFYSGVVAGAREALICGVPSL-SISL 197 (261)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N-~G~~v~ySGTVgAA~EA~~~GIPAI-AvS~ 197 (261)
+. .+|.||.=.-.... --..+..-||...+..+.-+|++-| -+|.
T Consensus 65 ~~-------~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 65 VA-------GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp HT-------TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred Hc-------CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 32 47888753321111 1123445677666555556787644 4554
No 109
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.85 E-value=96 Score=26.41 Aligned_cols=34 Identities=29% Similarity=0.452 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeC
Q 024878 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~ 103 (261)
++++||||=--| || ++|++.|.+.| ++|+++.-.
T Consensus 4 ~~~~vlVTGatG----~iG~~l~~~L~~~G-~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTILVTGGAG----YIGSHTAVELLAHG-YDVVIADNL 38 (341)
T ss_dssp SSCEEEEETTTS----HHHHHHHHHHHHTT-CEEEEECCC
T ss_pred CCcEEEEecCCc----HHHHHHHHHHHHCC-CcEEEEecC
Confidence 467899994322 34 67889999999 798887643
No 110
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=25.37 E-value=60 Score=28.96 Aligned_cols=34 Identities=15% Similarity=0.015 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEee
Q 024878 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP 102 (261)
+..++|||.|-.++ + ..+.+++++.| ++|+++..
T Consensus 5 ~~~~~ilI~g~g~~---~-~~~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG---Q-LGLYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG---G-HHHHHHHHHHT-CEEEEEEC
T ss_pred cCCCEEEEECCcHh---H-HHHHHHHHHCC-CEEEEEcC
Confidence 45678999998865 3 34778899999 68888754
No 111
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=25.09 E-value=47 Score=26.68 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=30.2
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcC-CCeEEEEeeCC
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREG-LYNVHVCAPQS 104 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G-~~~V~VvAP~~ 104 (261)
..-+|||. ||.+.+-+ +.++++.|++.| ...|.++++..
T Consensus 97 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~ 137 (181)
T 1a3c_A 97 TDQKVILV-DDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVD 137 (181)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEc
Confidence 34578888 99998754 678889999986 67888888764
No 112
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=24.87 E-value=1.1e+02 Score=26.00 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=26.2
Q ss_pred CCCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCeEEEEe
Q 024878 63 DSSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~-SpGi-~aL~~aL~~~G~~~V~VvA 101 (261)
+.+..++||| |=. +.|| +++++.|.+.| ++|+++.
T Consensus 5 ~l~~k~~lVT---Gas~~~GIG~aia~~la~~G-~~V~~~~ 41 (297)
T 1d7o_A 5 DLRGKRAFIA---GIADDNGYGWAVAKSLAAAG-AEILVGT 41 (297)
T ss_dssp CCTTCEEEEE---CCSSSSSHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccCCCEEEEE---CCCCCCChHHHHHHHHHHCC-CeEEEee
Confidence 3445679999 432 3677 78999999999 7898875
No 113
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=24.21 E-value=54 Score=28.18 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=28.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEE
Q 024878 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~V 99 (261)
..+..|.||=|||+...+...+.+.|++.|. ..+.
T Consensus 23 ~~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 23 TNSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp SSSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 3455699999999998888889999999884 4444
No 114
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=24.01 E-value=92 Score=25.22 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=24.5
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeC
Q 024878 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~ 103 (261)
..+.|+||||=-- -|| ++|++.|.+.| ++|+++.-.
T Consensus 18 ~l~~~~ilVtGat----G~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 18 YFQGMRVLVVGAN----GKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp ---CCEEEEETTT----SHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CcCCCeEEEECCC----ChHHHHHHHHHHhCC-CeEEEEECC
Confidence 4567899999322 234 67888888889 799988754
No 115
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=23.89 E-value=42 Score=24.94 Aligned_cols=28 Identities=18% Similarity=0.245 Sum_probs=14.4
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G 93 (261)
..+.++|||.-||-... ..|.+.|.+.|
T Consensus 11 ~~~~~~iLivdd~~~~~---~~l~~~L~~~g 38 (143)
T 3m6m_D 11 RVRSMRMLVADDHEANR---MVLQRLLEKAG 38 (143)
T ss_dssp ----CEEEEECSSHHHH---HHHHHHHHC--
T ss_pred ccccceEEEEeCCHHHH---HHHHHHHHHcC
Confidence 35668999998885433 34445555555
No 116
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=23.60 E-value=71 Score=22.27 Aligned_cols=26 Identities=23% Similarity=0.212 Sum_probs=15.6
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 024878 65 SKPVLLVTNGDGIESPGLVYLVEALVREG 93 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi~aL~~aL~~~G 93 (261)
++++|||..||-.. ...|.+.|.+.|
T Consensus 4 m~~~ilivdd~~~~---~~~l~~~L~~~g 29 (127)
T 2gkg_A 4 MSKKILIVESDTAL---SATLRSALEGRG 29 (127)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHHT
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhcC
Confidence 45789999888433 344555566656
No 117
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=23.55 E-value=1.1e+02 Score=25.23 Aligned_cols=36 Identities=8% Similarity=0.127 Sum_probs=26.0
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCe-EEEEeeCC
Q 024878 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYN-VHVCAPQS 104 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~-V~VvAP~~ 104 (261)
.+..+|||| |- +-|| +++++.|.+.| ++ |+++.-..
T Consensus 3 l~~k~vlVt---Ga-s~gIG~~~a~~l~~~G-~~~v~~~~r~~ 40 (254)
T 1sby_A 3 LTNKNVIFV---AA-LGGIGLDTSRELVKRN-LKNFVILDRVE 40 (254)
T ss_dssp CTTCEEEEE---TT-TSHHHHHHHHHHHHTC-CSEEEEEESSC
T ss_pred CCCcEEEEE---CC-CChHHHHHHHHHHHCC-CcEEEEEecCc
Confidence 345679999 43 4577 78999999999 65 77776443
No 118
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=23.48 E-value=1.3e+02 Score=24.82 Aligned_cols=37 Identities=8% Similarity=0.015 Sum_probs=25.8
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEee
Q 024878 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP 102 (261)
+.+..++|||=--|. .|| +++++.|.+.| ++|+++.-
T Consensus 4 ~l~~k~vlVTGasg~--~GIG~~ia~~l~~~G-~~V~~~~r 41 (266)
T 3oig_A 4 SLEGRNIVVMGVANK--RSIAWGIARSLHEAG-ARLIFTYA 41 (266)
T ss_dssp CCTTCEEEEECCCST--TSHHHHHHHHHHHTT-CEEEEEES
T ss_pred ccCCCEEEEEcCCCC--CcHHHHHHHHHHHCC-CEEEEecC
Confidence 345567999943322 356 57889999999 78888754
No 119
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=23.39 E-value=92 Score=25.81 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=28.2
Q ss_pred hHHHHHHHHHcCCCeeEEeecccC-CCCCCccHHH----HHHHHHHHHHHHHH
Q 024878 178 VVAGAREALICGVPSLSISLNWKK-DESQESDFKD----AVSVCLPLINAATR 225 (261)
Q Consensus 178 TVgAA~EA~~~GIPAIAvS~~~~~-~~~~~~d~~~----aa~~~~~li~~l~~ 225 (261)
+.+-|.-|..+|+|.++|..=.+. +.....+|++ |++.+.+++.++++
T Consensus 176 ~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~ 228 (231)
T 3dp9_A 176 ASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFLPLAAKSSSAMVLKMVE 228 (231)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 355566667789999999753221 1222334554 55556666666654
No 120
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=23.32 E-value=48 Score=26.44 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEE
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHV 99 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~V 99 (261)
+.-+|||. ||.+.+-+ +.++++.|++.|...|.+
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLV-SDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE-eccccchHHHHHHHHHHHHcCCeEEEE
Confidence 34578888 99998754 678889999998544544
No 121
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=23.09 E-value=82 Score=22.83 Aligned_cols=39 Identities=8% Similarity=0.079 Sum_probs=22.9
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
..||+||..++...-.|.+ +-..+......+|.|.+|..
T Consensus 48 ~~~dlvi~d~~l~~~~g~~------~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMD------ILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTCCEEEEESCCSSSCHHH------HHHHHHHHCTTCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCcHHH------HHHHHHHhCCCCeEEEEECC
Confidence 4699999988875433322 11122223456888888764
No 122
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=23.07 E-value=39 Score=26.07 Aligned_cols=91 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred CCeEEEecCCC---CCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 024878 66 KPVLLVTNGDG---IESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (261)
Q Consensus 66 ~~~ILlTNDDG---i~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV 142 (261)
++.||+|=--. ....++..+.++|.+.+ .+++++........ +... +..+.=.|-+-+
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~~~~~~------~~~~------------v~~~~~~~~~~~ 81 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDGNKPDT------LGLN------------TRLYKWIPQNDL 81 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCSSCCTT------CCTT------------EEEESSCCHHHH
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECCcCccc------CCCc------------EEEecCCCHHHH
Confidence 35577763221 12357888999998877 57777764332210 1111 112222343211
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEee
Q 024878 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISL 197 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~ 197 (261)
+. + ..-|++|+ ++| .+..+||+.+|+|.|++-.
T Consensus 82 ---l~--~---~~ad~~I~-------------~~G-~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 82 ---LG--H---PKTRAFIT-------------HGG-ANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp ---HT--S---TTEEEEEE-------------CCC-HHHHHHHHHHTCCEEECCC
T ss_pred ---hc--C---CCcCEEEE-------------cCC-ccHHHHHHHcCCCEEeccc
Confidence 11 1 25799997 122 2667799999999999975
No 123
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=22.90 E-value=51 Score=33.84 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=30.5
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCC
Q 024878 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
++.-||| .||++..-+..++++|+++| .+|.||+|..
T Consensus 601 rKVaILl--aDGfEe~El~~pvdaLr~AG-~~V~vVS~~~ 637 (753)
T 3ttv_A 601 RVVAILL--NDEVRSADLLAILKALKAKG-VHAKLLYSRM 637 (753)
T ss_dssp CEEEEEC--CTTCCHHHHHHHHHHHHHHT-CEEEEEESSS
T ss_pred CEEEEEe--cCCCCHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 3333555 47999999999999999999 7999999975
No 124
>3zbd_A NSP1, P9, non-structural protein 1; viral protein, alphacoronavirus; 1.49A {Porcine transmissible gastroenteritiscoronavirus}
Probab=22.84 E-value=21 Score=28.37 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=24.4
Q ss_pred cccCCCCCCeEEEecCCCCCCccHHHHHHHHH
Q 024878 59 TENVDSSKPVLLVTNGDGIESPGLVYLVEALV 90 (261)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~SpGi~aL~~aL~ 90 (261)
-|+|..++..|++.+|-+|.++|.. ..+++.
T Consensus 6 ~~~~~~~~~tLavasDseIsa~G~~-~~dav~ 36 (113)
T 3zbd_A 6 HHHMSSKQFKILVNEDYQVNVPSLP-IRDVLQ 36 (113)
T ss_dssp CCCCCCEEEEEEECSSCCEECCCBC-HHHHHH
T ss_pred ccccccceEEEEEecccccccCCcC-HHHHHH
Confidence 3567777889999999999999976 555554
No 125
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.74 E-value=1.3e+02 Score=25.23 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCeEEEEee
Q 024878 65 SKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 65 ~~~~ILlTNDDGi~-SpGi-~aL~~aL~~~G~~~V~VvAP 102 (261)
+.-.+||| |-. +.|| +++++.|.+.| ++|+++.-
T Consensus 5 ~gK~alVT---Gaa~~~GIG~aiA~~la~~G-a~Vvi~~r 40 (256)
T 4fs3_A 5 ENKTYVIM---GIANKRSIAFGVAKVLDQLG-AKLVFTYR 40 (256)
T ss_dssp TTCEEEEE---CCCSTTCHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEE---CCCCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 44568999 433 2577 78999999999 79999864
No 126
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=22.71 E-value=2.3e+02 Score=20.71 Aligned_cols=39 Identities=10% Similarity=0.114 Sum_probs=22.8
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
..||+||..++...--|.+ +-..+......+|.|.+|..
T Consensus 50 ~~~dlii~D~~l~~~~g~~------~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIE------ATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp TCCSEEEECSCCSSSCHHH------HHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEecCCCCCCHHH------HHHHHHHhCCCCeEEEEECC
Confidence 3699999988875422221 12222233457888888753
No 127
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=22.65 E-value=40 Score=29.97 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=22.1
Q ss_pred CCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEee
Q 024878 155 KPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISL 197 (261)
Q Consensus 155 ~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~ 197 (261)
..|++|+ .||. +..+||+.+|+|.|++-.
T Consensus 299 ~ad~~v~-------------~~G~-~t~~Ea~~~G~P~i~~p~ 327 (430)
T 2iyf_A 299 QADLFVT-------------HAGA-GGSQEGLATATPMIAVPQ 327 (430)
T ss_dssp TCSEEEE-------------CCCH-HHHHHHHHTTCCEEECCC
T ss_pred ccCEEEE-------------CCCc-cHHHHHHHhCCCEEECCC
Confidence 4688775 3454 568999999999999853
No 128
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=22.45 E-value=2.9e+02 Score=23.77 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=23.0
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
.+||+||+.. +..++...|...|||.+.+...
T Consensus 127 ~~pD~Vv~d~-------------~~~~~~~~A~~~gip~~~~~~~ 158 (400)
T 4amg_A 127 WRPDLVVHTP-------------TQGAGPLTAAALQLPCVELPLG 158 (400)
T ss_dssp HCCSEEEECT-------------TCTHHHHHHHHTTCCEEECCSS
T ss_pred cCCCEEEECc-------------chHHHHHHHHHcCCCceeeccc
Confidence 3799999742 2235566778899999987654
No 129
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=21.90 E-value=1.5e+02 Score=24.53 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=27.9
Q ss_pred hHHHHHHHHHcCCCeeEEeecccC-CCCCCccHHH----HHHHHHHHHHHHHH
Q 024878 178 VVAGAREALICGVPSLSISLNWKK-DESQESDFKD----AVSVCLPLINAATR 225 (261)
Q Consensus 178 TVgAA~EA~~~GIPAIAvS~~~~~-~~~~~~d~~~----aa~~~~~li~~l~~ 225 (261)
+.+-|.-|..+|+|.++|..=.+. +.....+|++ |++.+.+++.++++
T Consensus 179 ~aa~a~~a~~~gip~~~ir~IsD~a~~~~~~~~~~~~~~aa~~~~~~v~~~l~ 231 (233)
T 3eei_A 179 AAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTAAANSAKMVAEIVK 231 (233)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677899999999753221 1222334554 45555566666554
No 130
>2lw6_A Avrpiz-T protein; plant resistance gene, avirulence protein, protein degradation, apoptosis; NMR {Magnaporthe oryzae}
Probab=21.89 E-value=17 Score=26.39 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=11.4
Q ss_pred CCCCCC--CcccccchHH
Q 024878 165 RGSSCG--HHMFYSGVVA 180 (261)
Q Consensus 165 ~G~N~G--~~v~ySGTVg 180 (261)
.|...| +|++.|||||
T Consensus 62 agfsagtstdvlssgtvg 79 (80)
T 2lw6_A 62 AGFSAGTSTDVLSSGTVG 79 (80)
T ss_dssp TTBEECCCCTTTTCSCSC
T ss_pred hhccCCcccceecccccC
Confidence 344444 4799999997
No 131
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.84 E-value=96 Score=22.33 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=22.8
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHH--HHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREA--LICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA--~~~GIPAIAvS~~ 198 (261)
..||+||..++...-.|.+ +-..+.. ....+|.|.+|..
T Consensus 50 ~~~dlii~d~~l~~~~g~~------~~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWD------TIRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CCCEEEEEESCCSSSCHHH------HHHHHHHTTCCTTEEEEEEECT
T ss_pred cCCCEEEEeCCCCCCCHHH------HHHHHHhhcccCCCCEEEEECC
Confidence 3699999998875432221 1112222 2346889999865
No 132
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=21.71 E-value=16 Score=32.17 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=38.0
Q ss_pred EecCChHHHHHHHHhcccCCCCCCcEE-EecCCCCCCCCCcccccchHHHHHHHHH
Q 024878 133 EVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMFYSGVVAGAREALI 187 (261)
Q Consensus 133 ~V~GTPaDCV~laL~~~l~~~~~PDLV-ISGIN~G~N~G~~v~ySGTVgAA~EA~~ 187 (261)
.+.++|+ ...+|.+..+. --..+|+ +..+..|.+.|. ++.+|.|||..+|+.
T Consensus 150 il~~~p~-~aI~aaD~A~K-aA~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv~ 202 (225)
T 3gfh_A 150 YLVAPPL-EATYGIDAALK-SADVQLATYVPPPSETNYSA-AFLTGSQAACKAACN 202 (225)
T ss_dssp EEEECHH-HHHHHHHHHHH-HSCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHHH
T ss_pred EEEcCcH-HHHHHHHHHHh-hCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHH
Confidence 5678999 87888887653 2457888 677777777776 778888887766654
No 133
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.56 E-value=44 Score=29.20 Aligned_cols=22 Identities=27% Similarity=0.329 Sum_probs=17.3
Q ss_pred ccchHHHHHHHHHcCCCeeEEee
Q 024878 175 YSGVVAGAREALICGVPSLSISL 197 (261)
Q Consensus 175 ySGTVgAA~EA~~~GIPAIAvS~ 197 (261)
.+|+ +...||+.+|+|.|++..
T Consensus 293 ~~G~-~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 293 AGGS-GTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp CCCH-HHHHHHHHTTCCEEECCC
T ss_pred CCCH-HHHHHHHHhCCCEEecCC
Confidence 3454 567999999999999854
No 134
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=21.31 E-value=1.5e+02 Score=24.61 Aligned_cols=35 Identities=34% Similarity=0.444 Sum_probs=26.3
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEee
Q 024878 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAP 102 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP 102 (261)
+.+..+||||=- +-|| +++++.|.+.| ++|+++.-
T Consensus 6 ~l~~k~vlVTGa----s~giG~~ia~~l~~~G-~~V~~~~r 41 (260)
T 2ae2_A 6 NLEGCTALVTGG----SRGIGYGIVEELASLG-ASVYTCSR 41 (260)
T ss_dssp CCTTCEEEEESC----SSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCCEEEEECC----CcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 345567999932 4477 78999999999 78888764
No 135
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=21.29 E-value=89 Score=28.17 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=28.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEe
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvA 101 (261)
+.-+|||. ||.+.+-| +.+.+++|++.|..+|.+++
T Consensus 216 ~gk~VlLV-DDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILI-DDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEE-CSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE-ecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 34467777 99998765 67888999999977888887
No 136
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=21.12 E-value=1.4e+02 Score=25.74 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCeEEEEe
Q 024878 65 SKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (261)
Q Consensus 65 ~~~~ILlTNDDGi~-SpGi-~aL~~aL~~~G~~~V~VvA 101 (261)
+...+||| |-. +.|| +++++.|.+.| ++|+++.
T Consensus 8 ~gk~~lVT---Ga~~s~GIG~aia~~la~~G-~~Vv~~~ 42 (315)
T 2o2s_A 8 RGQTAFVA---GVADSHGYGWAIAKHLASAG-ARVALGT 42 (315)
T ss_dssp TTCEEEEE---CCSSSSSHHHHHHHHHHTTT-CEEEEEE
T ss_pred CCCEEEEe---CCCCCCChHHHHHHHHHHCC-CEEEEEe
Confidence 44579999 432 5677 68999999999 7998885
No 137
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=21.08 E-value=56 Score=26.26 Aligned_cols=41 Identities=15% Similarity=0.041 Sum_probs=29.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCCCC
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDK 106 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~~q 106 (261)
+.-+|||. ||.+.+-+ +.+.++.|++.|...|.+++...-.
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~ 160 (180)
T 1zn8_A 119 PGQRVVVV-DDLLATGGTMNAACELLGRLQAEVLECVSLVELT 160 (180)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEG
T ss_pred CCCEEEEE-cCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEcc
Confidence 34578888 99998754 7788899999996566666665443
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=20.47 E-value=97 Score=22.53 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeC
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~ 103 (261)
.|+|+|+ |...-|. .+++.|.+.| ++|+++-..
T Consensus 4 ~m~i~Ii---G~G~iG~-~~a~~L~~~g-~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY-TLAKSLSEKG-HDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHH-HHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEE---CCCHHHH-HHHHHHHhCC-CeEEEEECC
Confidence 4789999 6655565 4667888888 799988653
No 139
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=20.43 E-value=76 Score=22.47 Aligned_cols=39 Identities=15% Similarity=-0.025 Sum_probs=24.1
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHH--HcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREAL--ICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~--~~GIPAIAvS~~ 198 (261)
.+|||||..++....-|.+ +-..+... ...+|.|.+|..
T Consensus 46 ~~~dlii~D~~l~~~~g~~------~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLA------LVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHH------HHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHH------HHHHHHhhhccCCCCEEEEECC
Confidence 3699999999876433322 11222222 457899999865
No 140
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=20.32 E-value=71 Score=26.01 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCeEEEEeeCC
Q 024878 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQS 104 (261)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-i~aL~~aL~~~G~~~V~VvAP~~ 104 (261)
..-+|||. ||.+.+-+ +.++++.|++.|...|.+++...
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~ 158 (197)
T 1y0b_A 119 DQDHVLII-DDFLANGQAAHGLVSIVKQAGASIAGIGIVIE 158 (197)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcCEEEEE-EcccccCHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 44578888 99888754 78899999999965565665544
No 141
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.28 E-value=92 Score=22.13 Aligned_cols=39 Identities=23% Similarity=0.129 Sum_probs=20.8
Q ss_pred CCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 154 ~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
.+||+||..++...-.|.++ -..+......+|.|.+|..
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~ii~~t~~ 88 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKL------LEHIRNRGDQTPVLVISAT 88 (130)
T ss_dssp CCCSEEEECCC-----CHHH------HHHHHHTTCCCCEEEEECC
T ss_pred CCCCEEEEecCCCCCCHHHH------HHHHHhcCCCCCEEEEEcC
Confidence 46999999888654333321 1222223346888888764
No 142
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=20.21 E-value=69 Score=26.04 Aligned_cols=28 Identities=29% Similarity=0.310 Sum_probs=23.1
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 024878 66 KPVLLVTNGDGIESPGLVYLVEALVREGL 94 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi~aL~~aL~~~G~ 94 (261)
+..|.||=|||+.. +...+.+.|++.|.
T Consensus 4 ~~~V~LTFDDG~~~-~~~~il~iL~~~~v 31 (195)
T 2cc0_A 4 NGYVGLTFDDGPSG-STQSLLNALRQNGL 31 (195)
T ss_dssp SEEEEEEEESCCST-THHHHHHHHHHTTC
T ss_pred CCEEEEEEcCCCch-hHHHHHHHHHHcCC
Confidence 34599999999975 48888999998875
No 143
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=20.09 E-value=24 Score=30.64 Aligned_cols=19 Identities=32% Similarity=0.349 Sum_probs=15.6
Q ss_pred chHHHHHHHHHcCCCeeEEee
Q 024878 177 GVVAGAREALICGVPSLSISL 197 (261)
Q Consensus 177 GTVgAA~EA~~~GIPAIAvS~ 197 (261)
|++ .+||+.+|+|.|+.-.
T Consensus 291 g~~--~lEA~a~G~PvI~~~~ 309 (384)
T 1vgv_A 291 GGI--QEEAPSLGKPVLVMRD 309 (384)
T ss_dssp STG--GGTGGGGTCCEEEESS
T ss_pred cch--HHHHHHcCCCEEEccC
Confidence 555 6899999999998853
No 144
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.06 E-value=3.6e+02 Score=22.07 Aligned_cols=71 Identities=10% Similarity=0.105 Sum_probs=42.6
Q ss_pred CCeEEEecCCCCCCccH-HHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHH
Q 024878 66 KPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSL 144 (261)
Q Consensus 66 ~~~ILlTNDDGi~SpGi-~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV~l 144 (261)
..+||||=-- .|| +++++.|.+.| ++|+++.-..++... . .+.++=+=.+.+.-
T Consensus 22 ~k~vlITGas----~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~------------~--------~~~~d~~d~~~v~~ 76 (251)
T 3orf_A 22 SKNILVLGGS----GALGAEVVKFFKSKS-WNTISIDFRENPNAD------------H--------SFTIKDSGEEEIKS 76 (251)
T ss_dssp CCEEEEETTT----SHHHHHHHHHHHHTT-CEEEEEESSCCTTSS------------E--------EEECSCSSHHHHHH
T ss_pred CCEEEEECCC----CHHHHHHHHHHHHCC-CEEEEEeCCcccccc------------c--------ceEEEeCCHHHHHH
Confidence 3579999432 466 78999999999 789888755433110 0 12233233344554
Q ss_pred HHhcccCCCCCCcEEEe
Q 024878 145 ALSGALFSWSKPLLVIS 161 (261)
Q Consensus 145 aL~~~l~~~~~PDLVIS 161 (261)
.+..+.-...++|.||.
T Consensus 77 ~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 77 VIEKINSKSIKVDTFVC 93 (251)
T ss_dssp HHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEE
Confidence 55544333357899986
No 145
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=20.06 E-value=96 Score=23.20 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=49.7
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCeEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 024878 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (261)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGi~aL~~aL~~~G~~~V~VvAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~y~V~GTPaDCV 142 (261)
..++++|||..||-... ..|.+.|.+.| ++|+ ..-.+..++.
T Consensus 33 ~~~~~~Ilivdd~~~~~---~~l~~~L~~~g-~~v~----------------------------------~~~~~~~~al 74 (157)
T 3hzh_A 33 TGIPFNVLIVDDSVFTV---KQLTQIFTSEG-FNII----------------------------------DTAADGEEAV 74 (157)
T ss_dssp TTEECEEEEECSCHHHH---HHHHHHHHHTT-CEEE----------------------------------EEESSHHHHH
T ss_pred CCCceEEEEEeCCHHHH---HHHHHHHHhCC-CeEE----------------------------------EEECCHHHHH
Confidence 34567999999985443 34455566666 3331 1223445554
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCCCcccccchHHHHHHHHHcCCCeeEEeec
Q 024878 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (261)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EA~~~GIPAIAvS~~ 198 (261)
...-.. ..+|||||..++...--|.+ +-..+......+|.|.+|..
T Consensus 75 ~~l~~~----~~~~dliilD~~l~~~~g~~------~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 75 IKYKNH----YPNIDIVTLXITMPKMDGIT------CLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHH----GGGCCEEEECSSCSSSCHHH------HHHHHHHHCTTCCEEEEESC
T ss_pred HHHHhc----CCCCCEEEEeccCCCccHHH------HHHHHHhhCCCCcEEEEecc
Confidence 433221 11589999999876544432 12223333467999998864
No 146
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=20.01 E-value=99 Score=27.77 Aligned_cols=35 Identities=14% Similarity=0.369 Sum_probs=24.3
Q ss_pred CCCCeEEEecCCCCC---CccHHHHHHHHHhcCCCeEEEE
Q 024878 64 SSKPVLLVTNGDGIE---SPGLVYLVEALVREGLYNVHVC 100 (261)
Q Consensus 64 ~~~~~ILlTNDDGi~---SpGi~aL~~aL~~~G~~~V~Vv 100 (261)
.++||||+.++.++- ......+++.|.+.| +|+|+
T Consensus 12 ~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G--~V~vi 49 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFRTPRRANIHFITDQLALRG--TTRFF 49 (406)
T ss_dssp -CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS--CEEEE
T ss_pred CCCceEEEEecccCCChhhhhHhHHHHHHHhCC--ceEEE
Confidence 346889988776332 112456888898887 99999
Done!