Query 024879
Match_columns 261
No_of_seqs 114 out of 333
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 16:00:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024879.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024879hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wina_ d.43.2.1 (A:) Flotilli 78.8 7.3 0.00053 29.0 9.5 88 125-217 22-119 (143)
2 d2nsza1 a.118.1.14 (A:322-450) 21.4 33 0.0024 25.1 3.3 27 162-188 4-30 (129)
3 d1k8qa_ c.69.1.6 (A:) Gastric 18.3 28 0.0021 27.0 2.4 25 113-138 19-43 (377)
4 d1pzqa_ a.34.3.1 (A:) Erythron 13.8 9.6 0.0007 25.1 -1.4 23 98-120 25-47 (60)
5 d2ok3a1 b.62.1.1 (A:1-159) Cyc 10.1 64 0.0047 23.7 2.2 17 205-221 142-158 (159)
6 d1ug3a1 a.118.1.14 (A:1235-142 9.3 1.4E+02 0.01 22.6 4.1 27 162-188 7-33 (193)
7 d1ylfa1 a.4.5.55 (A:5-142) Hyp 8.9 1.8E+02 0.013 20.4 4.4 30 159-188 107-136 (138)
8 d2zjrm1 b.34.5.6 (M:2-109) Rib 8.7 81 0.0059 22.8 2.2 31 201-231 76-106 (108)
9 d2je8a3 b.1.4.1 (A:679-783) Be 8.2 2.5E+02 0.018 18.8 4.8 39 63-101 58-96 (105)
10 d1a6qa1 a.159.1.1 (A:297-368) 8.2 82 0.006 21.2 1.8 31 162-192 14-45 (72)
No 1
>d1wina_ d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.80 E-value=7.3 Score=28.96 Aligned_cols=88 Identities=10% Similarity=0.098 Sum_probs=55.1
Q ss_pred EEEEeCCCcEEEEEEEEEeeccCCcCccchhhh--------hhhhHHHHHHHHHHHHHHHhhCCHHHHHHH--HhhhhHH
Q 024879 125 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQ--------ASQIRQIRRKMREIMIAQAASCDLKGLVEK--FIAEIIG 194 (261)
Q Consensus 125 vdVkT~DGy~lRvf~i~fT~kr~~q~kkt~Ya~--------~SQi~~IRk~m~eii~~~~~~~~l~e~V~~--li~~~i~ 194 (261)
.+|.|+||-.|.|-++++-+-... .+-..|+- ..=...|+..+...|.+.+...++++++.. -+.+.+.
T Consensus 22 q~v~TkD~v~v~V~a~v~~rV~~~-~~~~~~a~~~~l~~~~~~~~~~i~~~~~~~lR~vig~~~l~el~~~R~~i~~~v~ 100 (143)
T d1wina_ 22 EDVETAEGVALTVTGVAQVKIMTE-KELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVR 100 (143)
T ss_dssp EEEECSSSCEEEECCEEEEEECCC-SSCCHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHH
T ss_pred ceEECCCCCEEEEEEEEEEEEcCc-HHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhccccHHHHHhCHHHHHHHHH
Confidence 458899999999977665554322 22222331 112245677777778999999999999854 4556666
Q ss_pred HHHHHhccccccccceeEEEEEe
Q 024879 195 REIEKATLSIYPLQNVFIRKVKI 217 (261)
Q Consensus 195 keI~k~~k~IyPl~~V~IrKvKv 217 (261)
.+|.....+. -++|.-+.+
T Consensus 101 ~~i~~~l~~~----Gi~v~~v~I 119 (143)
T d1wina_ 101 EVAAPDVGRM----GIEILSFTI 119 (143)
T ss_dssp HHHHHHHTTT----TEEEEEEEC
T ss_pred HHHHHHHHHh----CeEEEEEEE
Confidence 6666665543 245555444
No 2
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.45 E-value=33 Score=25.05 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 024879 162 RQIRRKMREIMIAQAASCDLKGLVEKF 188 (261)
Q Consensus 162 ~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (261)
+.++++|..+|.+.....|++|++.-+
T Consensus 4 ~~l~kk~~~ll~EY~~~~D~~Ea~~~l 30 (129)
T d2nsza1 4 NHLVKEIDMLLKEYLLSGDISEAEHCL 30 (129)
T ss_dssp CHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 468999999999999999999987655
No 3
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=18.32 E-value=28 Score=27.01 Aligned_cols=25 Identities=32% Similarity=0.573 Sum_probs=17.5
Q ss_pred hhccceeeEEEEEEEEeCCCcEEEEE
Q 024879 113 LVRKWHTLIEAYVDVKTTDNYTLRMF 138 (261)
Q Consensus 113 lVrK~~t~Iea~vdVkT~DGy~lRvf 138 (261)
+|+.|.=-.|.| .|+|.||+.|+++
T Consensus 19 ~~~~~~y~~e~h-~v~t~DG~~l~~~ 43 (377)
T d1k8qa_ 19 MITYWGYPAEEY-EVVTEDGYILGID 43 (377)
T ss_dssp HHHHTTCCCEEE-EEECTTSEEEEEE
T ss_pred HHHHcCCCceEE-EEEcCCCCEEEEE
Confidence 445544445664 7899999999876
No 4
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=13.84 E-value=9.6 Score=25.08 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=16.8
Q ss_pred Eeeecccccchhhhhhhccceee
Q 024879 98 TNFWGMDFTTDKLRSLVRKWHTL 120 (261)
Q Consensus 98 T~F~GmelT~DklrSlVrK~~t~ 120 (261)
..-.||+=---.|.||.|||+|+
T Consensus 25 ~~~~gh~dvg~rle~llrrw~sr 47 (60)
T d1pzqa_ 25 SAEDGHDDVGQRLESLLRRWNSR 47 (60)
T ss_dssp TTSSCCHHHHHHHHHHHHHHHHH
T ss_pred chhhcccHHHHHHHHHHHHHhcc
Confidence 33456666666789999999975
No 5
>d2ok3a1 b.62.1.1 (A:1-159) Cyclophilin-like protein PPIL3B {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.14 E-value=64 Score=23.73 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=15.5
Q ss_pred ccccceeEEEEEeeeCC
Q 024879 205 YPLQNVFIRKVKILKAP 221 (261)
Q Consensus 205 yPl~~V~IrKvKvlk~P 221 (261)
-|+++|.|.++.||..|
T Consensus 142 ~P~~~i~I~~v~i~~~P 158 (159)
T d2ok3a1 142 RPLNDVHIKDITIHANP 158 (159)
T ss_dssp CBSSCCBEEEEEEECCS
T ss_pred CcCCCcEEEEEEEEeCC
Confidence 39999999999999887
No 6
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.33 E-value=1.4e+02 Score=22.63 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 024879 162 RQIRRKMREIMIAQAASCDLKGLVEKF 188 (261)
Q Consensus 162 ~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (261)
..+++++..+|.+.....|++|++.-+
T Consensus 7 ee~~kk~~~il~Ey~~~~D~~Ea~~~l 33 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHLNDMKEAVQCV 33 (193)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 467899999999999999999988766
No 7
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=8.88 E-value=1.8e+02 Score=20.40 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=26.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 024879 159 SQIRQIRRKMREIMIAQAASCDLKGLVEKF 188 (261)
Q Consensus 159 SQi~~IRk~m~eii~~~~~~~~l~e~V~~l 188 (261)
..++.+...+.+.+.+.+.+.+|.++++.+
T Consensus 107 c~l~~~~~~~~~~~~~~L~~~Tl~dL~~~~ 136 (138)
T d1ylfa1 107 AVLEIILIQAQSAMEEVLRNITMGQLFETL 136 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHh
Confidence 457888888899999999999999999874
No 8
>d2zjrm1 b.34.5.6 (M:2-109) Ribosomal protein L19 {Deinococcus radiodurans [TaxId: 1299]}
Probab=8.75 E-value=81 Score=22.81 Aligned_cols=31 Identities=19% Similarity=0.391 Sum_probs=22.2
Q ss_pred ccccccccceeEEEEEeeeCCccccchhhhh
Q 024879 201 TLSIYPLQNVFIRKVKILKAPKFDLGKLMEV 231 (261)
Q Consensus 201 ~k~IyPl~~V~IrKvKvlk~Pk~~~~kl~e~ 231 (261)
...+|||+.=.|-+++|++..+.-=+||.-|
T Consensus 76 VEr~fpl~SP~i~~IeV~r~~kvRRakLyYL 106 (108)
T d2zjrm1 76 VERVFPFASPLVNQVTIVERGKVRRAKLYYL 106 (108)
T ss_dssp EEEEEETTCTTEEEEEEEECCCCSSSCCGGG
T ss_pred EEEEEEcCCCCccEEEEEEecceeeeeeeee
Confidence 4567888888888888888776555555443
No 9
>d2je8a3 b.1.4.1 (A:679-783) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=8.19 E-value=2.5e+02 Score=18.84 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=20.3
Q ss_pred CcEEEEeccCCCCchhhceeEEEEEEeeecCCeeeEeee
Q 024879 63 HRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFW 101 (261)
Q Consensus 63 GRv~EvsLaDL~~d~~~~~rK~kf~i~~V~G~~a~T~F~ 101 (261)
-.++..++.+|-++.+....-++|...+-.|....+++|
T Consensus 58 ~~v~s~~~~~ll~~~~~~~~~l~~~L~d~~g~~~s~n~y 96 (105)
T d2je8a3 58 KCVYRAKLDGWLTPEDCRRSFLKLILKDKSGHQVAESVH 96 (105)
T ss_dssp EEEEEEESTTTSCHHHHTTEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEEHHHHhcCCCcccEEEEEEEEcCCCCEeeeeeE
Confidence 356666666665544333334444444555555555544
No 10
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.15 E-value=82 Score=21.24 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhhC-CHHHHHHHHhhhh
Q 024879 162 RQIRRKMREIMIAQAASC-DLKGLVEKFIAEI 192 (261)
Q Consensus 162 ~~IRk~m~eii~~~~~~~-~l~e~V~~li~~~ 192 (261)
+.|.+++.|+|.+..... +|..+++.|.+++
T Consensus 14 ~~Le~~v~eii~~~~~~~~dl~~Vm~~L~~e~ 45 (72)
T d1a6qa1 14 KYLECRVEEIIKKQGEGVPDLVHVMRTLASEN 45 (72)
T ss_dssp HHHHHHHHHHCC----CCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcccCCchHHHHHHHHHhcC
Confidence 468888899998877654 6888888776543
Done!