Query 024880
Match_columns 261
No_of_seqs 225 out of 1901
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:07:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 8.5E-48 1.8E-52 351.2 25.6 180 79-260 111-349 (371)
2 PTZ00037 DnaJ_C chaperone prot 100.0 2.4E-45 5.2E-50 344.9 24.5 181 80-260 120-365 (421)
3 PRK14296 chaperone protein Dna 100.0 1.9E-44 4E-49 335.1 25.7 180 80-260 119-360 (372)
4 PRK14286 chaperone protein Dna 100.0 8.2E-44 1.8E-48 330.9 28.0 180 80-260 120-356 (372)
5 PRK14288 chaperone protein Dna 100.0 4.5E-44 9.7E-49 332.4 26.1 180 80-260 110-344 (369)
6 PRK14285 chaperone protein Dna 100.0 5.2E-43 1.1E-47 324.8 28.2 180 80-260 116-352 (365)
7 PRK14277 chaperone protein Dna 100.0 4.6E-43 1E-47 327.4 27.9 178 80-259 125-363 (386)
8 PRK14297 chaperone protein Dna 100.0 4.6E-43 9.9E-48 326.9 27.2 179 80-260 118-357 (380)
9 PRK14298 chaperone protein Dna 100.0 6.4E-43 1.4E-47 325.4 26.8 178 80-259 111-349 (377)
10 PRK14281 chaperone protein Dna 100.0 1.2E-42 2.6E-47 325.5 27.9 179 80-260 133-371 (397)
11 PRK14278 chaperone protein Dna 100.0 8.8E-43 1.9E-47 324.6 26.2 180 80-260 109-349 (378)
12 PRK14280 chaperone protein Dna 100.0 2E-42 4.4E-47 322.1 25.7 178 80-259 113-351 (376)
13 PRK14276 chaperone protein Dna 100.0 3.2E-42 6.9E-47 321.2 26.7 178 80-259 116-354 (380)
14 PRK14279 chaperone protein Dna 100.0 2.8E-42 6E-47 322.6 25.7 179 79-260 142-377 (392)
15 PRK14295 chaperone protein Dna 100.0 2.9E-42 6.2E-47 322.2 25.4 180 79-260 135-371 (389)
16 PRK14284 chaperone protein Dna 100.0 3.4E-42 7.4E-47 322.1 25.6 179 80-259 128-364 (391)
17 PRK14301 chaperone protein Dna 100.0 1E-41 2.3E-46 316.9 28.2 178 80-259 114-348 (373)
18 PRK14291 chaperone protein Dna 100.0 1.2E-41 2.5E-46 317.6 28.2 179 80-259 126-368 (382)
19 PRK14299 chaperone protein Dna 100.0 1.7E-41 3.7E-46 306.1 26.9 159 80-259 126-284 (291)
20 PRK14287 chaperone protein Dna 100.0 1.4E-41 3E-46 315.9 26.3 178 80-259 108-346 (371)
21 PRK14300 chaperone protein Dna 100.0 5E-41 1.1E-45 312.4 26.9 179 80-259 115-350 (372)
22 PRK14294 chaperone protein Dna 100.0 7.5E-41 1.6E-45 310.6 26.2 179 80-260 114-349 (366)
23 TIGR02349 DnaJ_bact chaperone 100.0 9E-41 1.9E-45 309.1 25.3 179 80-260 113-352 (354)
24 PRK14290 chaperone protein Dna 100.0 1.3E-40 2.9E-45 308.9 26.3 177 81-260 120-355 (365)
25 PRK14282 chaperone protein Dna 100.0 1.3E-40 2.8E-45 309.4 25.7 180 80-260 122-362 (369)
26 PRK14292 chaperone protein Dna 100.0 4E-40 8.7E-45 306.4 27.7 177 80-259 109-346 (371)
27 PRK10767 chaperone protein Dna 100.0 2.5E-40 5.3E-45 307.8 25.2 179 80-260 112-347 (371)
28 PRK10266 curved DNA-binding pr 100.0 4.5E-40 9.8E-45 298.8 25.9 177 80-260 114-292 (306)
29 PRK14293 chaperone protein Dna 100.0 2.6E-39 5.7E-44 301.1 25.6 180 80-260 113-353 (374)
30 PRK14283 chaperone protein Dna 100.0 4.2E-38 9E-43 293.4 23.7 178 80-259 116-354 (378)
31 PRK14289 chaperone protein Dna 100.0 1E-37 2.2E-42 291.6 23.7 179 80-260 124-363 (386)
32 TIGR03835 termin_org_DnaJ term 100.0 7E-36 1.5E-40 289.3 20.4 160 82-245 655-816 (871)
33 KOG0712 Molecular chaperone (D 100.0 3.3E-35 7.1E-40 265.2 17.3 175 82-259 99-337 (337)
34 PF01556 CTDII: DnaJ C termina 99.9 3.7E-24 8E-29 157.9 8.4 81 174-254 1-81 (81)
35 KOG0713 Molecular chaperone (D 99.4 5E-14 1.1E-18 126.8 2.3 170 80-249 123-328 (336)
36 KOG0714 Molecular chaperone (D 99.3 7.2E-11 1.6E-15 104.9 14.2 144 82-225 158-305 (306)
37 PRK14282 chaperone protein Dna 99.2 6.3E-11 1.4E-15 110.6 8.2 87 80-178 272-359 (369)
38 PF01556 CTDII: DnaJ C termina 99.1 1.1E-10 2.5E-15 85.8 5.2 73 85-169 1-75 (81)
39 PRK14290 chaperone protein Dna 99.1 2E-10 4.4E-15 107.0 7.9 87 80-179 266-353 (365)
40 PRK14299 chaperone protein Dna 99.1 4.6E-10 1E-14 101.6 9.6 71 169-247 126-196 (291)
41 PRK14294 chaperone protein Dna 99.0 5.1E-10 1.1E-14 104.4 8.0 86 80-178 260-346 (366)
42 PRK14284 chaperone protein Dna 99.0 7.1E-10 1.5E-14 104.3 8.2 86 80-176 274-360 (391)
43 PRK14285 chaperone protein Dna 99.0 7E-10 1.5E-14 103.4 8.1 85 80-176 262-347 (365)
44 PRK10767 chaperone protein Dna 99.0 1.3E-09 2.8E-14 101.8 7.9 87 80-179 258-345 (371)
45 PRK14298 chaperone protein Dna 99.0 1.1E-09 2.3E-14 102.6 7.0 87 80-179 261-348 (377)
46 PRK10266 curved DNA-binding pr 99.0 3.3E-09 7.1E-14 96.7 9.9 75 170-246 115-202 (306)
47 TIGR02349 DnaJ_bact chaperone 98.9 2E-09 4.3E-14 100.0 7.8 83 80-175 263-346 (354)
48 PRK14279 chaperone protein Dna 98.9 2.3E-09 5.1E-14 100.8 8.1 80 80-172 289-368 (392)
49 PRK14287 chaperone protein Dna 98.9 2.3E-09 4.9E-14 100.2 7.5 84 80-176 258-342 (371)
50 PRK14300 chaperone protein Dna 98.9 3.2E-09 7E-14 99.2 8.3 82 80-173 261-343 (372)
51 PRK14301 chaperone protein Dna 98.9 3.4E-09 7.3E-14 99.1 7.9 84 80-176 260-344 (373)
52 PRK14295 chaperone protein Dna 98.9 5.3E-09 1.2E-13 98.3 8.2 80 80-171 282-361 (389)
53 PRK14291 chaperone protein Dna 98.9 8.6E-09 1.9E-13 96.7 9.6 75 80-166 271-346 (382)
54 PRK14289 chaperone protein Dna 98.9 5.1E-09 1.1E-13 98.3 7.9 84 171-255 126-281 (386)
55 PRK14288 chaperone protein Dna 98.9 5.5E-09 1.2E-13 97.6 7.8 83 80-174 254-337 (369)
56 PRK14293 chaperone protein Dna 98.9 5.1E-09 1.1E-13 98.0 7.1 86 80-178 263-350 (374)
57 PRK14276 chaperone protein Dna 98.8 8.2E-09 1.8E-13 96.8 7.6 80 80-172 266-346 (380)
58 PRK14286 chaperone protein Dna 98.8 1.1E-08 2.5E-13 95.5 8.1 84 80-175 266-350 (372)
59 PRK14281 chaperone protein Dna 98.8 1.4E-08 3E-13 95.7 7.5 80 80-172 282-362 (397)
60 PRK14280 chaperone protein Dna 98.8 1.6E-08 3.5E-13 94.7 7.8 80 80-172 263-343 (376)
61 PRK14292 chaperone protein Dna 98.8 1.4E-08 3E-13 95.0 7.0 84 80-176 258-342 (371)
62 PRK14297 chaperone protein Dna 98.7 2.1E-08 4.5E-13 94.1 7.4 80 80-172 268-348 (380)
63 PRK14278 chaperone protein Dna 98.7 2.6E-08 5.7E-13 93.3 8.0 81 80-172 259-340 (378)
64 PRK14277 chaperone protein Dna 98.7 5.7E-08 1.2E-12 91.3 8.1 80 80-172 275-355 (386)
65 PRK14283 chaperone protein Dna 98.7 6.2E-08 1.3E-12 90.8 8.1 79 80-171 266-345 (378)
66 COG0484 DnaJ DnaJ-class molecu 98.7 5.7E-08 1.2E-12 89.8 7.2 83 80-175 260-343 (371)
67 PRK14296 chaperone protein Dna 98.6 8.5E-08 1.9E-12 89.7 7.7 79 81-172 270-351 (372)
68 PTZ00037 DnaJ_C chaperone prot 98.6 9.3E-08 2E-12 90.7 7.5 80 80-171 270-355 (421)
69 KOG0715 Molecular chaperone (D 98.5 4.5E-07 9.8E-12 81.9 8.2 96 83-185 137-288 (288)
70 TIGR03835 termin_org_DnaJ term 98.5 4.5E-07 9.7E-12 89.9 8.1 72 80-164 742-813 (871)
71 KOG0712 Molecular chaperone (D 97.3 0.00097 2.1E-08 61.2 7.5 74 81-166 249-324 (337)
72 COG2214 CbpA DnaJ-class molecu 92.0 0.51 1.1E-05 39.4 6.6 78 85-175 150-227 (237)
73 PF12991 DUF3875: Domain of un 64.8 8.1 0.00018 26.0 2.8 25 231-255 26-52 (54)
74 cd02639 R3H_RRM R3H domain of 44.9 29 0.00062 23.9 3.0 22 238-259 17-38 (60)
75 COG2214 CbpA DnaJ-class molecu 40.9 1.1E+02 0.0024 24.9 6.7 70 174-246 150-219 (237)
76 PF12791 RsgI_N: Anti-sigma fa 34.3 1.1E+02 0.0023 20.2 4.5 35 189-223 5-39 (56)
77 PRK14051 negative regulator Gr 32.8 2.2E+02 0.0049 22.0 6.4 72 152-225 46-119 (123)
78 cd05792 S1_eIF1AD_like S1_eIF1 30.8 1.4E+02 0.0031 21.6 4.9 60 186-257 8-74 (78)
79 TIGR00013 taut 4-oxalocrotonat 29.8 87 0.0019 20.7 3.6 23 236-259 2-24 (63)
80 KOG0315 G-protein beta subunit 29.3 61 0.0013 29.1 3.2 31 177-207 18-49 (311)
81 KOG0715 Molecular chaperone (D 28.3 64 0.0014 29.2 3.4 53 184-248 220-272 (288)
82 cd06007 R3H_DEXH_helicase R3H 27.0 83 0.0018 21.4 3.0 22 238-259 16-37 (59)
83 TIGR00523 eIF-1A eukaryotic/ar 26.9 2.5E+02 0.0053 21.3 5.8 61 185-257 27-93 (99)
84 PLN00208 translation initiatio 25.7 2.3E+02 0.005 23.1 5.8 60 185-257 40-105 (145)
85 cd02640 R3H_NRF R3H domain of 24.4 97 0.0021 21.2 2.9 22 238-259 17-38 (60)
86 cd02784 MopB_CT_PHLH The MopB_ 23.0 3.1E+02 0.0067 21.8 6.1 47 178-224 39-91 (137)
87 cd02641 R3H_Smubp-2_like R3H d 22.9 1E+02 0.0022 21.0 2.8 21 239-259 18-38 (60)
88 PF08774 VRR_NUC: VRR-NUC doma 22.8 1.3E+02 0.0028 22.1 3.6 25 235-259 62-87 (100)
89 PF03803 Scramblase: Scramblas 22.7 97 0.0021 26.3 3.4 21 238-258 190-210 (221)
90 cd05793 S1_IF1A S1_IF1A: Trans 22.7 2.9E+02 0.0064 19.7 5.5 60 185-257 8-73 (77)
91 COG5435 Uncharacterized conser 22.5 1.5E+02 0.0033 24.2 4.2 29 231-259 108-136 (147)
92 cd02792 MopB_CT_Formate-Dh-Na- 21.7 3.5E+02 0.0075 20.2 6.6 46 178-223 36-87 (122)
93 smart00276 GLECT Galectin. Gal 21.4 1.4E+02 0.0031 23.1 3.8 42 204-245 3-49 (128)
94 PRK02289 4-oxalocrotonate taut 20.9 1.4E+02 0.003 19.9 3.2 21 239-259 4-24 (60)
95 PF02736 Myosin_N: Myosin N-te 20.8 1.3E+02 0.0029 18.7 2.8 31 172-205 9-39 (42)
96 COG1470 Predicted membrane pro 20.6 8.2E+02 0.018 24.1 10.2 97 84-197 9-105 (513)
97 PTZ00329 eukaryotic translatio 20.3 3.5E+02 0.0076 22.3 5.9 60 185-257 40-105 (155)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.5e-48 Score=351.15 Aligned_cols=180 Identities=28% Similarity=0.525 Sum_probs=168.0
Q ss_pred CCCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC--------------------------------------
Q 024880 79 VPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG-------------------------------------- 116 (261)
Q Consensus 79 ~~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G-------------------------------------- 116 (261)
+++++.||.+.|+|||||||+|++++|.+++.+.| |+|
T Consensus 111 ~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~ 190 (371)
T COG0484 111 RPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCN 190 (371)
T ss_pred CcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCc
Confidence 47889999999999999999999999999999874 221
Q ss_pred ----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEE
Q 024880 117 ----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 117 ----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~ 179 (261)
.++.+.++|+|+||||+.+|++|+++|+|++.+ ++++|||||+|.+++|+.|.|+|+|||+++
T Consensus 191 G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~ 270 (371)
T COG0484 191 GTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEV 270 (371)
T ss_pred cceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEecc
Confidence 168899999999999999999999999999987 568899999999999999999999999999
Q ss_pred EecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 180 KVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 180 ~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
+|++.+|++|++++||||||+ ++|+||+++|+|+++||+|+|||..++ ..+|||||+++|++|++|+++|+++|+++.
T Consensus 271 ~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~ 348 (371)
T COG0484 271 PISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFA 348 (371)
T ss_pred ccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999998765 667999999999999999999999999986
Q ss_pred C
Q 024880 260 G 260 (261)
Q Consensus 260 ~ 260 (261)
.
T Consensus 349 ~ 349 (371)
T COG0484 349 K 349 (371)
T ss_pred H
Confidence 4
No 2
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=2.4e-45 Score=344.86 Aligned_cols=181 Identities=36% Similarity=0.650 Sum_probs=165.4
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----C----------------C-----------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----N----------------G----------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~----------------G----------------------- 116 (261)
+++++|+.+.|+|||||||+|+++++.+.+.+.|. + |
T Consensus 120 ~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~ 199 (421)
T PTZ00037 120 KKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCN 199 (421)
T ss_pred ccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCC
Confidence 45789999999999999999999999998876531 1 1
Q ss_pred ---c---------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 ---R---------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 ---~---------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
+ ++.+.++++|.|||||++|++|+|+|+|++.++..+|||+|+|++++|+.|+|+|+||+++
T Consensus 200 G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~ 279 (421)
T PTZ00037 200 GQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFIT 279 (421)
T ss_pred CcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEE
Confidence 1 2445689999999999999999999999998888899999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCC--CCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECC--CCCCHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP--TKLTPEQRAG 254 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~--~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P--~~l~~~~~~~ 254 (261)
++|+|++||+|+++.|+||||+.|.|+||++ ++||++++|+|+|||..+++..+|||||+|+|.|| +.||++|+++
T Consensus 280 ~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~l 359 (421)
T PTZ00037 280 KKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEI 359 (421)
T ss_pred EeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHH
Confidence 9999999999999999999999899999965 99999999999999987755678999999999999 8999999999
Q ss_pred HHHHhC
Q 024880 255 LKRALG 260 (261)
Q Consensus 255 l~~~l~ 260 (261)
|+++||
T Consensus 360 l~~l~~ 365 (421)
T PTZ00037 360 LKSLFP 365 (421)
T ss_pred HHHhcc
Confidence 999986
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-44 Score=335.11 Aligned_cols=180 Identities=21% Similarity=0.342 Sum_probs=162.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC-----------------c---------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG-----------------R--------------------- 117 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G-----------------~--------------------- 117 (261)
+++++|++++|+|||||||+|+++++.+.+.+.|. +| .
T Consensus 119 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C 198 (372)
T PRK14296 119 STKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVC 198 (372)
T ss_pred cCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCc
Confidence 45789999999999999999999999998876541 11 0
Q ss_pred ------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCcccc-ccceEE
Q 024880 118 ------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRD-SNDLIV 177 (261)
Q Consensus 118 ------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~-G~DL~~ 177 (261)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+ |+||++
T Consensus 199 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~ 278 (372)
T PRK14296 199 NGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILM 278 (372)
T ss_pred CCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEE
Confidence 23456899999999999999999999999864 5679999999999999999995 899999
Q ss_pred EEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 178 NHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 178 ~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+++|+|++||+|+++.|+||||+ +.|+||++++||++++|+|+|||...++..+|||||+|+|+||++||++|+++|++
T Consensus 279 ~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~ 357 (372)
T PRK14296 279 TYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQ 357 (372)
T ss_pred EEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 99999999999999999999998 99999999999999999999999665456789999999999999999999999999
Q ss_pred HhC
Q 024880 258 ALG 260 (261)
Q Consensus 258 ~l~ 260 (261)
++.
T Consensus 358 l~~ 360 (372)
T PRK14296 358 IYE 360 (372)
T ss_pred HHh
Confidence 873
No 4
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-44 Score=330.91 Aligned_cols=180 Identities=27% Similarity=0.476 Sum_probs=164.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||||+|+++++++.|.+.|. +|
T Consensus 120 ~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G 199 (372)
T PRK14286 120 PQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKG 199 (372)
T ss_pred CCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCcee
Confidence 46799999999999999999999999999876641 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.++++++|.||||+++|++|+|+++|++.+. ..+|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 200 ~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Is 279 (372)
T PRK14286 200 TVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKIS 279 (372)
T ss_pred eEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEEC
Confidence 0345668999999999999999999999998764 46799999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
|.+||+|+++.|+||||++|.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||++|+++|+++|++++.
T Consensus 280 l~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 356 (372)
T PRK14286 280 LAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFAR 356 (372)
T ss_pred HHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998654 4689999999999999999999999999873
No 5
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.5e-44 Score=332.36 Aligned_cols=180 Identities=20% Similarity=0.323 Sum_probs=165.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G--------------------------------------- 116 (261)
+++++|++++|+|||||||+|+++++++.|.+.| |+|
T Consensus 110 ~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~ 189 (369)
T PRK14288 110 SSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGK 189 (369)
T ss_pred CCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCce
Confidence 4578999999999999999999999999988654 111
Q ss_pred ------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEEEEecHH
Q 024880 117 ------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 184 (261)
Q Consensus 117 ------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~l~ 184 (261)
.++.+.++++|.|||||++|++|+|+|+|++.++..+|||+|+|++++|+.|+|+|+||+++++|+|.
T Consensus 190 ~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~ 269 (369)
T PRK14288 190 IIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFT 269 (369)
T ss_pred EccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHH
Confidence 14566789999999999999999999999998778899999999999999999999999999999999
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
|||+|+++.|+||||+.+.|+||++++||++++|+|+|||..+. ..+|||||+|+|.+|++|+++|+++|+++++
T Consensus 270 eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 344 (369)
T PRK14288 270 TIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHA 344 (369)
T ss_pred HHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999998999999999999999999999997653 4689999999999999999999999999984
No 6
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.2e-43 Score=324.83 Aligned_cols=180 Identities=23% Similarity=0.383 Sum_probs=164.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||||+|++++++++|.++|. +|
T Consensus 116 ~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G 195 (365)
T PRK14285 116 HEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNG 195 (365)
T ss_pred CCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcc
Confidence 45789999999999999999999999999887641 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 196 ~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Is 275 (365)
T PRK14285 196 KIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPIS 275 (365)
T ss_pred cccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecC
Confidence 0356678999999999999999999999999875 46899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
|.+||+|++++|+||||++|.|+||++++++++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 276 l~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~ 352 (365)
T PRK14285 276 FTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSK 352 (365)
T ss_pred HHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999998664 4579999999999999999999999999873
No 7
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-43 Score=327.43 Aligned_cols=178 Identities=24% Similarity=0.444 Sum_probs=162.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|+++.|+|||||+|+|+++++.+.|.+.|. +|
T Consensus 125 ~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 204 (386)
T PRK14277 125 PQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRC 204 (386)
T ss_pred CCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCC
Confidence 45789999999999999999999999999887641 11
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||+|+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 205 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 284 (386)
T PRK14277 205 HGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLE 284 (386)
T ss_pred CcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEE
Confidence 034567899999999999999999999999854 45789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|++||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..++ ..+|||||+|+|.||++|+++|+++|+++
T Consensus 285 ~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l 362 (386)
T PRK14277 285 MPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREF 362 (386)
T ss_pred EEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999998664 46899999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 363 ~ 363 (386)
T PRK14277 363 E 363 (386)
T ss_pred H
Confidence 7
No 8
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-43 Score=326.95 Aligned_cols=179 Identities=24% Similarity=0.442 Sum_probs=162.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC-----------------c---------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG-----------------R--------------------- 117 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G-----------------~--------------------- 117 (261)
+++++|++++|+|||||+|+|++++|.+.|.+.|. +| .
T Consensus 118 ~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 197 (380)
T PRK14297 118 PQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKC 197 (380)
T ss_pred CCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCC
Confidence 45789999999999999999999999999876541 11 0
Q ss_pred ------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEE
Q 024880 118 ------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 118 ------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
++.+.++++|.||||+++|++|+++++|++.+. ..+|||+|+|++++|+.|+|+|+||+++
T Consensus 198 ~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~ 277 (380)
T PRK14297 198 GGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYID 277 (380)
T ss_pred CCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEE
Confidence 245678999999999999999999999998654 5689999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|++||+|++++|+||||+ +.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||++|+++|+++|+++
T Consensus 278 ~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~ 355 (380)
T PRK14297 278 KHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMF 355 (380)
T ss_pred EEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 9999999999999999999997 899999999999999999999997653 56899999999999999999999999999
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
|+
T Consensus 356 ~~ 357 (380)
T PRK14297 356 ME 357 (380)
T ss_pred HH
Confidence 84
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.4e-43 Score=325.35 Aligned_cols=178 Identities=25% Similarity=0.399 Sum_probs=162.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CC-----------------Cc---------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----AN-----------------GR--------------------- 117 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~-----------------G~--------------------- 117 (261)
+++++|++++|+|||||||+|+++++.+.+.+.| |+ |.
T Consensus 111 ~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 190 (377)
T PRK14298 111 PRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTC 190 (377)
T ss_pred CCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCC
Confidence 4578999999999999999999999999987664 11 10
Q ss_pred ------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 118 ------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 118 ------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 191 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~ 270 (377)
T PRK14298 191 HGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISE 270 (377)
T ss_pred CCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEE
Confidence 23466899999999999999999999999864 56899999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+||+|+++.|+||||+ +.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+++++++|+++
T Consensus 271 ~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 271 IPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999998654 46899999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 349 ~ 349 (377)
T PRK14298 349 D 349 (377)
T ss_pred H
Confidence 7
No 10
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-42 Score=325.55 Aligned_cols=179 Identities=29% Similarity=0.485 Sum_probs=163.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|+++.|+|||||||+|++++++++|.+.|. +|
T Consensus 133 ~~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 212 (397)
T PRK14281 133 GIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCG 212 (397)
T ss_pred CCCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCc
Confidence 35799999999999999999999999999887641 11
Q ss_pred ----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEEE
Q 024880 117 ----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 117 ----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~~ 179 (261)
.++.++++++|.||||+++|++|+|+|+|++.+. ..+|||+|+|++++|+.|+|+|+||++++
T Consensus 213 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~ 292 (397)
T PRK14281 213 GEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNL 292 (397)
T ss_pred ceeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEE
Confidence 0345668999999999999999999999998764 57999999999999999999999999999
Q ss_pred EecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 180 KVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 180 ~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
+|+|.+||+|++++|+||||+ +.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||++||++|+++|++++
T Consensus 293 ~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~ 370 (397)
T PRK14281 293 AVSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELK 370 (397)
T ss_pred EecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 999999999999999999998 899999999999999999999997654 468999999999999999999999999987
Q ss_pred C
Q 024880 260 G 260 (261)
Q Consensus 260 ~ 260 (261)
.
T Consensus 371 ~ 371 (397)
T PRK14281 371 K 371 (397)
T ss_pred h
Confidence 3
No 11
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.8e-43 Score=324.62 Aligned_cols=180 Identities=28% Similarity=0.448 Sum_probs=163.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CC-----------------Cc---------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----AN-----------------GR--------------------- 117 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~-----------------G~--------------------- 117 (261)
+++++|+++.|+|||||+|+|+++++.+.+.+.| |+ |.
T Consensus 109 ~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 188 (378)
T PRK14278 109 VRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTC 188 (378)
T ss_pred CCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCC
Confidence 4678999999999999999999999999987653 11 10
Q ss_pred ------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEE
Q 024880 118 ------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 118 ------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
++.+.++++|.||||+++|++|+|+++|++.++ ..+|||+|+|++++|+.|+|+|+||+++
T Consensus 189 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~ 268 (378)
T PRK14278 189 RGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCT 268 (378)
T ss_pred CccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEE
Confidence 345678999999999999999999999999875 4679999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+||+|+++.|+|||++.|.|+||+++++|++++|+|+|||..++ ..+|||||+|+|.||++||++|+++|+++
T Consensus 269 ~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~ 347 (378)
T PRK14278 269 VSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLREL 347 (378)
T ss_pred EecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 99999999999999999997777999999999999999999999998654 56899999999999999999999999999
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
++
T Consensus 348 ~~ 349 (378)
T PRK14278 348 KA 349 (378)
T ss_pred Hh
Confidence 74
No 12
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-42 Score=322.11 Aligned_cols=178 Identities=23% Similarity=0.435 Sum_probs=162.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|++++|++.|.+.| |+|
T Consensus 113 ~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 192 (376)
T PRK14280 113 PRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHC 192 (376)
T ss_pred cccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCC
Confidence 4578999999999999999999999999988764 111
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||+|+++|++|+|+|+|++.+. ..+|||+|+|++++|+.|+|+|+||+++
T Consensus 193 ~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 272 (376)
T PRK14280 193 NGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCE 272 (376)
T ss_pred CCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEE
Confidence 0245678999999999999999999999998654 5789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+||+|+++.|+||||+ +.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|++||++|+++|+++
T Consensus 273 ~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l 350 (376)
T PRK14280 273 MPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREF 350 (376)
T ss_pred EecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999997 899999999999999999999998654 46899999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 351 ~ 351 (376)
T PRK14280 351 A 351 (376)
T ss_pred H
Confidence 7
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-42 Score=321.18 Aligned_cols=178 Identities=22% Similarity=0.404 Sum_probs=161.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++.+.+.+.| |+|
T Consensus 116 ~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 195 (380)
T PRK14276 116 PRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVC 195 (380)
T ss_pred CCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCC
Confidence 4578999999999999999999999999987653 111
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||+|+++|++|+|+|+|++.+. ..+|||+|+|++++|+.|+|+|+||+++
T Consensus 196 ~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 275 (380)
T PRK14276 196 HGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYT 275 (380)
T ss_pred CCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEE
Confidence 0345668999999999999999999999998764 4679999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+||+|++++|+|+||+ +.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|+++
T Consensus 276 ~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~ 353 (380)
T PRK14276 276 LPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAF 353 (380)
T ss_pred EecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999998654 46799999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 354 ~ 354 (380)
T PRK14276 354 A 354 (380)
T ss_pred H
Confidence 7
No 14
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-42 Score=322.55 Aligned_cols=179 Identities=25% Similarity=0.429 Sum_probs=162.8
Q ss_pred CCCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC--------------------------------------
Q 024880 79 VPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG-------------------------------------- 116 (261)
Q Consensus 79 ~~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G-------------------------------------- 116 (261)
++++++|++++|+|||||||+|+++++++.+.+.|. +|
T Consensus 142 ~~~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~ 221 (392)
T PRK14279 142 RPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGT 221 (392)
T ss_pred CCCCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCce
Confidence 356799999999999999999999999998876541 11
Q ss_pred --------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEEEEe
Q 024880 117 --------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 181 (261)
Q Consensus 117 --------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I 181 (261)
.++.+.++++|.||||+++|++|+|+++|++.+. ..+|||+|+|++++|+.|+|+|+||+++++|
T Consensus 222 G~~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~I 301 (392)
T PRK14279 222 GSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPV 301 (392)
T ss_pred eEEeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEc
Confidence 0355678999999999999999999999998764 4679999999999999999999999999999
Q ss_pred cHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 182 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 182 ~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
+|.+||+|++++|+||||+ +.|+||++++++++++|+|+|||... ..+|||||+|+|.||++|+++|+++|++++.
T Consensus 302 sl~eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 302 SFTELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE 377 (392)
T ss_pred cHHHHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999998 89999999999999999999999643 5689999999999999999999999999874
No 15
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-42 Score=322.16 Aligned_cols=180 Identities=27% Similarity=0.426 Sum_probs=163.6
Q ss_pred CCCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC--------------------------------------
Q 024880 79 VPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG-------------------------------------- 116 (261)
Q Consensus 79 ~~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G-------------------------------------- 116 (261)
++++++|++++|+|||||||+|++++|++.|.++|. +|
T Consensus 135 ~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~ 214 (389)
T PRK14295 135 QPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGR 214 (389)
T ss_pred CCCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcce
Confidence 356899999999999999999999999999876541 11
Q ss_pred --------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEe
Q 024880 117 --------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 181 (261)
Q Consensus 117 --------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I 181 (261)
.++.+.++++|.||+|+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|
T Consensus 215 G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~I 294 (389)
T PRK14295 215 GLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPV 294 (389)
T ss_pred eEEeccCCCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEee
Confidence 134567899999999999999999999999865 45789999999999999999999999999999
Q ss_pred cHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 182 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 182 ~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
+|.+||+|++++|+||||++|.|+||+++++|++++|+|+|||... ..+|||||+|+|.||++|+++|+++|++++.
T Consensus 295 sl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 295 TFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred cHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999998899999999999999999999999743 5689999999999999999999999999874
No 16
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-42 Score=322.05 Aligned_cols=179 Identities=23% Similarity=0.403 Sum_probs=163.4
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||||+||++++++.+.+.|. +|
T Consensus 128 ~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G 207 (391)
T PRK14284 128 ARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEG 207 (391)
T ss_pred cCCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCC
Confidence 46789999999999999999999999999876541 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.|||||++|++|+|+|+|++.++ .++|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 208 ~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is 287 (391)
T PRK14284 208 RVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIG 287 (391)
T ss_pred cccCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEec
Confidence 0345678999999999999999999999999874 57899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccC-CcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 183 LAEALGGTSVSLITLD-GRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 183 l~~Al~G~~~~i~tld-G~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
|.+||+|++++|+||| ++.|.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|++++
T Consensus 288 l~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~ 364 (391)
T PRK14284 288 FVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFA 364 (391)
T ss_pred HHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999999 667999999999999999999999998654 468999999999999999999999999987
No 17
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1e-41 Score=316.93 Aligned_cols=178 Identities=23% Similarity=0.419 Sum_probs=163.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++++.+.+.|. +|
T Consensus 114 ~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G 193 (373)
T PRK14301 114 PQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEG 193 (373)
T ss_pred CCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCcee
Confidence 46799999999999999999999999999876541 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.||+|+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 194 ~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Is 273 (373)
T PRK14301 194 RVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEIS 273 (373)
T ss_pred eecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEec
Confidence 135677899999999999999999999999865 457899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
|.+||+|++++|+||||+ +.|+||+++++|++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|++++
T Consensus 274 l~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~ 348 (373)
T PRK14301 274 FVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFE 348 (373)
T ss_pred HHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 999999999999999998 999999999999999999999998664 568999999999999999999999999986
No 18
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-41 Score=317.58 Aligned_cols=179 Identities=27% Similarity=0.513 Sum_probs=163.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|+++.|+|||||||+|+++++.+.|.+.|. +|
T Consensus 126 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G 205 (382)
T PRK14291 126 PVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG 205 (382)
T ss_pred ccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCce
Confidence 45799999999999999999999999999887642 11
Q ss_pred ------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEecH
Q 024880 117 ------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 183 (261)
Q Consensus 117 ------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~l 183 (261)
.++.+.++++|.|||||++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||++++.|+|
T Consensus 206 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl 285 (382)
T PRK14291 206 VLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITV 285 (382)
T ss_pred EEccCCCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeH
Confidence 134567899999999999999999999999865 5789999999999999999999999999999999
Q ss_pred HHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCC--CCC------HHHHHHH
Q 024880 184 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPT--KLT------PEQRAGL 255 (261)
Q Consensus 184 ~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~--~l~------~~~~~~l 255 (261)
.+||+|+++.|+|+||+.+.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+ .|+ ++|+++|
T Consensus 286 ~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~ 364 (382)
T PRK14291 286 AEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLL 364 (382)
T ss_pred HHHhCCCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHH
Confidence 999999999999999998999999999999999999999998654 4689999999999997 599 9999999
Q ss_pred HHHh
Q 024880 256 KRAL 259 (261)
Q Consensus 256 ~~~l 259 (261)
++++
T Consensus 365 ~~l~ 368 (382)
T PRK14291 365 KELD 368 (382)
T ss_pred HHHH
Confidence 9876
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-41 Score=306.09 Aligned_cols=159 Identities=30% Similarity=0.546 Sum_probs=149.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
++++.|+++++.|||+|||+||++++++. .++++|+||||+++|++|+++|+|++. |||+|+
T Consensus 126 ~~~g~dl~~~l~isL~ea~~G~~~~i~l~-------------g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~ 187 (291)
T PRK14299 126 ARKGRDLEAELPLTLEEAYRGGEKVVEVA-------------GERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLV 187 (291)
T ss_pred CCCCCCEEEEEEecHHHHhCCCeEEEeeC-------------CEEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEE
Confidence 46789999999999999999999998775 358999999999999999999999863 999999
Q ss_pred EEEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEE
Q 024880 160 IDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKF 239 (261)
Q Consensus 160 i~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~ 239 (261)
|++++|+.|+|+|+||+++++|+|.+|++|+++.|+||||+ +.|+||+++++|++++|+|+|||... +.+|||||+|
T Consensus 188 i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~~--~~~GDL~v~~ 264 (291)
T PRK14299 188 VRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRGP--AGRGDQYAEV 264 (291)
T ss_pred EEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCCC--CCCCCEEEEE
Confidence 99999999999999999999999999999999999999997 99999999999999999999999632 5689999999
Q ss_pred EEECCCCCCHHHHHHHHHHh
Q 024880 240 EVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 240 ~V~~P~~l~~~~~~~l~~~l 259 (261)
+|.+|++|+++|+++|++++
T Consensus 265 ~V~~P~~l~~~~~~~l~~l~ 284 (291)
T PRK14299 265 RITIPTRPTPEEERLYKQLA 284 (291)
T ss_pred EEECCCCCCHHHHHHHHHHH
Confidence 99999999999999999986
No 20
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-41 Score=315.87 Aligned_cols=178 Identities=20% Similarity=0.434 Sum_probs=161.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC-----------------c---------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG-----------------R--------------------- 117 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G-----------------~--------------------- 117 (261)
+++++|++++|+|||||+|+|++++|.+.|.+.|. +| .
T Consensus 108 ~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 187 (371)
T PRK14287 108 PRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHC 187 (371)
T ss_pred CCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCC
Confidence 45789999999999999999999999999876641 11 0
Q ss_pred ------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 118 ------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 118 ------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 188 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 267 (371)
T PRK14287 188 EGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCE 267 (371)
T ss_pred CCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEE
Confidence 23455899999999999999999999999875 45789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
+.|+|.+||+|++++|+|+||+ +.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+.+|+++|+++
T Consensus 268 ~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l 345 (371)
T PRK14287 268 MPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREF 345 (371)
T ss_pred EeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999997654 46899999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 346 ~ 346 (371)
T PRK14287 346 A 346 (371)
T ss_pred H
Confidence 7
No 21
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5e-41 Score=312.38 Aligned_cols=179 Identities=25% Similarity=0.393 Sum_probs=163.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|.|||||+|+|+++++.+.|.+.|. +|
T Consensus 115 ~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G 194 (372)
T PRK14300 115 KVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNG 194 (372)
T ss_pred CCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccc
Confidence 35789999999999999999999999999887642 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 195 ~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Is 274 (372)
T PRK14300 195 QIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPIS 274 (372)
T ss_pred eEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecC
Confidence 034567899999999999999999999999864 567899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
|++||+|+++.|+||||+.|.|+||++++++++++|+|+|||..++ ..+|||||+|+|.||++||++|+++|++++
T Consensus 275 l~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~ 350 (372)
T PRK14300 275 FVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFK 350 (372)
T ss_pred HHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999999988999999999999999999999997653 468999999999999999999999999987
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-41 Score=310.64 Aligned_cols=179 Identities=25% Similarity=0.434 Sum_probs=162.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++++.+.+.|. +|
T Consensus 114 ~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G 193 (366)
T PRK14294 114 VRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMG 193 (366)
T ss_pred CCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcC
Confidence 46789999999999999999999999999876541 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.||||+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|+
T Consensus 194 ~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is 273 (366)
T PRK14294 194 KVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPIS 273 (366)
T ss_pred eecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeC
Confidence 135667899999999999999999999999865 467899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
|.+||+|++++|+||||+ +.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 274 l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 349 (366)
T PRK14294 274 FVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFAR 349 (366)
T ss_pred HHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 999999999999999998 799999999999999999999997654 4689999999999999999999999999873
No 23
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=9e-41 Score=309.09 Aligned_cols=179 Identities=28% Similarity=0.500 Sum_probs=163.4
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++.++|.+.|. +|
T Consensus 113 ~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 192 (354)
T TIGR02349 113 PRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTC 192 (354)
T ss_pred CCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCC
Confidence 56789999999999999999999999999876641 11
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
+++.+.++++|.|||||++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 193 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~ 272 (354)
T TIGR02349 193 GGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIE 272 (354)
T ss_pred CCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEE
Confidence 135667899999999999999999999999864 45789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
+.|+|.+||+|+++.|+|||| .+.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|+++
T Consensus 273 ~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~ 350 (354)
T TIGR02349 273 VPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEEL 350 (354)
T ss_pred EEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 999999999999999999999 4999999999999999999999998654 47899999999999999999999999999
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
|+
T Consensus 351 ~~ 352 (354)
T TIGR02349 351 AE 352 (354)
T ss_pred Hh
Confidence 85
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-40 Score=308.91 Aligned_cols=177 Identities=23% Similarity=0.389 Sum_probs=161.5
Q ss_pred CCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----C----------------C------------------------
Q 024880 81 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----N----------------G------------------------ 116 (261)
Q Consensus 81 ~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~----------------G------------------------ 116 (261)
++++|+++.|+|||||+|+|+++++++.|.+.|. + |
T Consensus 120 ~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G 199 (365)
T PRK14290 120 NIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGG 199 (365)
T ss_pred CCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCC
Confidence 4589999999999999999999999998876541 1 1
Q ss_pred ---------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEEEEe
Q 024880 117 ---------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 181 (261)
Q Consensus 117 ---------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I 181 (261)
.++.+.++++|.||||+++|++|+|+|+|++ ++..+|||+|+|++++|+.|+|+|+||+++++|
T Consensus 200 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~I 278 (365)
T PRK14290 200 RGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKI 278 (365)
T ss_pred ceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEe
Confidence 1345678999999999999999999999986 677899999999999999999999999999999
Q ss_pred cHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 182 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 182 ~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
+|.+|++|+++.|+|++|+ +.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|+++|+
T Consensus 279 sl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~ 355 (365)
T PRK14290 279 NFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFD 355 (365)
T ss_pred CHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999986 999999999999999999999997654 4689999999999999999999999999884
No 25
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-40 Score=309.37 Aligned_cols=180 Identities=23% Similarity=0.386 Sum_probs=163.4
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----C-----------------C----------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----N-----------------G---------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~-----------------G---------------------- 116 (261)
+++++|++++|+|||||+|+|++++++++|.+.|. + |
T Consensus 122 ~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 201 (369)
T PRK14282 122 ARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERC 201 (369)
T ss_pred CCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCC
Confidence 46799999999999999999999999999876541 1 1
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 202 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~ 281 (369)
T PRK14282 202 GGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYD 281 (369)
T ss_pred CCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEE
Confidence 034556899999999999999999999999865 45789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+|++|++++|+|+||++|.|+||++++++++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+++++|+++
T Consensus 282 ~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l 360 (369)
T PRK14282 282 VTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKEL 360 (369)
T ss_pred EEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 99999999999999999999998999999999999999999999997543 46899999999999999999999999998
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
+.
T Consensus 361 ~~ 362 (369)
T PRK14282 361 AK 362 (369)
T ss_pred HH
Confidence 73
No 26
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4e-40 Score=306.41 Aligned_cols=177 Identities=27% Similarity=0.442 Sum_probs=160.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|+++.++|||||+|+|+++++.+++.+.|. +|
T Consensus 109 ~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~ 188 (371)
T PRK14292 109 PARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPT 188 (371)
T ss_pred ccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCC
Confidence 45789999999999999999999999999876541 11
Q ss_pred ------------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 ------------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 ------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||+||++|++|+|+|+|++.++.. |||+|+|++++|+.|+|+|+||+++
T Consensus 189 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~ 267 (371)
T PRK14292 189 CRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYE 267 (371)
T ss_pred CcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhceeEE
Confidence 023456789999999999999999999999977665 9999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+|++|+++.|+||||+ +.|+||++++++++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|+++
T Consensus 268 ~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~ 345 (371)
T PRK14292 268 ARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAY 345 (371)
T ss_pred eccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 589999999999999999999998654 46799999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 346 ~ 346 (371)
T PRK14292 346 A 346 (371)
T ss_pred H
Confidence 7
No 27
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-40 Score=307.83 Aligned_cols=179 Identities=26% Similarity=0.439 Sum_probs=162.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++.+.+.+.|. +|
T Consensus 112 ~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G 191 (371)
T PRK10767 112 ARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRG 191 (371)
T ss_pred CCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCce
Confidence 46789999999999999999999999999876641 11
Q ss_pred -------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEEEEec
Q 024880 117 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 182 (261)
Q Consensus 117 -------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~ 182 (261)
.++.+.++++|.||||+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||++++.|+
T Consensus 192 ~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is 271 (371)
T PRK10767 192 KIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPIS 271 (371)
T ss_pred eECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeC
Confidence 134567899999999999999999999999854 467899999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 024880 183 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 183 l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
|.+||+|++++|+||||+ +.|+||++++++++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 272 l~eAl~G~~~~i~~ldG~-i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 272 FTTAALGGEIEVPTLDGR-VKLKIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEE 347 (371)
T ss_pred HHHHhCCCeEEEecCCCc-EEEEeCCCCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999995 999999999999999999999998654 5689999999999999999999999999873
No 28
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=4.5e-40 Score=298.80 Aligned_cols=177 Identities=21% Similarity=0.301 Sum_probs=161.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceec-ccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~-~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~ 157 (261)
++++.|++++++|||+|+|+||++++++++.++++.|.+.. ..++++|.||+||++|++|+++++|++.+. ..+|||+
T Consensus 114 ~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~ 193 (306)
T PRK10266 114 AARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLW 193 (306)
T ss_pred CCCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEE
Confidence 45789999999999999999999999999888876663222 236899999999999999999999998654 5789999
Q ss_pred EEEEEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEE
Q 024880 158 FVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRI 237 (261)
Q Consensus 158 v~i~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I 237 (261)
|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||+ +.|+||++++++++++|+|+|||..+ .+|||||
T Consensus 194 v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v 269 (306)
T PRK10266 194 LVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYA 269 (306)
T ss_pred EEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEE
Confidence 9999999999999999999999999999999999999999998 89999999999999999999999743 5899999
Q ss_pred EEEEECCCCCCHHHHHHHHHHhC
Q 024880 238 KFEVKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~l~ 260 (261)
+|+|.+|++|+++|+++|++++.
T Consensus 270 ~~~v~~P~~l~~~q~~l~~~l~~ 292 (306)
T PRK10266 270 VLKIVMPPKPDEKTAALWQQLAD 292 (306)
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999863
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-39 Score=301.09 Aligned_cols=180 Identities=23% Similarity=0.399 Sum_probs=162.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G--------------------------------------- 116 (261)
+++++|+++.|+|||||+|+|++++++++|.++| |+|
T Consensus 113 ~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 192 (374)
T PRK14293 113 PQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTC 192 (374)
T ss_pred ccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCC
Confidence 4578999999999999999999999999987654 111
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||||+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+++||+++
T Consensus 193 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~ 272 (374)
T PRK14293 193 NGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSE 272 (374)
T ss_pred CcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEE
Confidence 024556789999999999999999999999864 45689999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+||+|+++.|+||||+ +.|+||++++++++++|+|+|||..+++..+|||||+|+|+||++|+++|+++|+++
T Consensus 273 ~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 273 IKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred eccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 899999999999999999999998665446899999999999999999999999998
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
+.
T Consensus 352 ~~ 353 (374)
T PRK14293 352 AK 353 (374)
T ss_pred Hh
Confidence 73
No 30
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-38 Score=293.44 Aligned_cols=178 Identities=25% Similarity=0.480 Sum_probs=162.0
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+++++|++++|+|||||+|+|+++++++.+.+.|. +|
T Consensus 116 ~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 195 (378)
T PRK14283 116 PQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDC 195 (378)
T ss_pred ccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCC
Confidence 45789999999999999999999999999876641 11
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||||+++|++|+|+++|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 196 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~ 275 (378)
T PRK14283 196 QGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYE 275 (378)
T ss_pred CccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEE
Confidence 034567899999999999999999999999865 46789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
++|+|.+|++|++++|+|||| +|.|+||++++++++++|+|+|||.... ..+|||||+|+|.||++|+++|+++|+++
T Consensus 276 ~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~ 353 (378)
T PRK14283 276 KPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREF 353 (378)
T ss_pred EecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 999999999999999999999 5999999999999999999999997653 46899999999999999999999999998
Q ss_pred h
Q 024880 259 L 259 (261)
Q Consensus 259 l 259 (261)
+
T Consensus 354 ~ 354 (378)
T PRK14283 354 A 354 (378)
T ss_pred H
Confidence 7
No 31
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1e-37 Score=291.63 Aligned_cols=179 Identities=27% Similarity=0.451 Sum_probs=163.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC---------------------------------------
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG--------------------------------------- 116 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G--------------------------------------- 116 (261)
+.+++|+++.|+|||||+|+|+++++++.+.+.|. +|
T Consensus 124 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 203 (386)
T PRK14289 124 VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTC 203 (386)
T ss_pred CCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCC
Confidence 45789999999999999999999999999887641 11
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEEEEEEEcCCCccccccceEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v~i~~~~h~~f~R~G~DL~~~ 178 (261)
.++.+.++++|.||+|+++|++|+++++|++.+ +..+|||+|+|++++|+.|+|+++||+++
T Consensus 204 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~ 283 (386)
T PRK14289 204 NGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYN 283 (386)
T ss_pred CccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEE
Confidence 024566899999999999999999999999864 56789999999999999999999999999
Q ss_pred EEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q 024880 179 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 179 ~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~~ 258 (261)
+.|+|.+|++|+++.|+|+||+ +.|+||+++++++++||+|+|||..++ ..+|||||+|+|.||++|+++|+++|+++
T Consensus 284 ~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l 361 (386)
T PRK14289 284 LLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKM 361 (386)
T ss_pred eccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999999997 899999999999999999999997654 46899999999999999999999999998
Q ss_pred hC
Q 024880 259 LG 260 (261)
Q Consensus 259 l~ 260 (261)
+.
T Consensus 362 ~~ 363 (386)
T PRK14289 362 EN 363 (386)
T ss_pred Hh
Confidence 84
No 32
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=7e-36 Score=289.32 Aligned_cols=160 Identities=16% Similarity=0.194 Sum_probs=147.0
Q ss_pred CCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCc-eecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEE
Q 024880 82 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGR-QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 160 (261)
Q Consensus 82 kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i 160 (261)
..-+|++.|.||||++|+||+|+|++.|.++|+.|. .+.+.++++|+||+||++|++|+|+|+|++.++.. |||+|+|
T Consensus 655 ~~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvI 733 (871)
T TIGR03835 655 TNVNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVF 733 (871)
T ss_pred cccceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEE
Confidence 456899999999999999999999999999988763 46667899999999999999999999999876654 9999999
Q ss_pred EEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEE
Q 024880 161 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE 240 (261)
Q Consensus 161 ~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~ 240 (261)
++++|+.|+|+|+|||++++|+|.+||+|+++.|+||||+ ++|+||++++||+++||+|+|||... +.||||||+|+
T Consensus 734 kVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~ 810 (871)
T TIGR03835 734 KVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLY 810 (871)
T ss_pred EEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEE
Confidence 9999999999999999999999999999999999999998 99999999999999999999999543 56899999999
Q ss_pred EE-CCC
Q 024880 241 VK-FPT 245 (261)
Q Consensus 241 V~-~P~ 245 (261)
|. +++
T Consensus 811 V~~~~k 816 (871)
T TIGR03835 811 YSSVMK 816 (871)
T ss_pred Eeeccc
Confidence 97 344
No 33
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-35 Score=265.21 Aligned_cols=175 Identities=43% Similarity=0.688 Sum_probs=163.7
Q ss_pred CCCCeEEEEecChhhhhcCcEEEEEEEEEEEcC----CC-----------------------------------------
Q 024880 82 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDA----NG----------------------------------------- 116 (261)
Q Consensus 82 kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g----~G----------------------------------------- 116 (261)
+++|+.+.|.|||||+|.|.++++.++++++|- +|
T Consensus 99 rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G 178 (337)
T KOG0712|consen 99 RGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNG 178 (337)
T ss_pred cCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCC
Confidence 399999999999999999999999999998841 11
Q ss_pred -----------------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEEE
Q 024880 117 -----------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 117 -----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~ 179 (261)
+++.+.+.++|+|++|++++++|++.+++++.++..++|+++.|..++|+.|.|+++||++..
T Consensus 179 ~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~ 258 (337)
T KOG0712|consen 179 SGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKL 258 (337)
T ss_pred ccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceee
Confidence 167888999999999999999999999999998888999999999999999999999999999
Q ss_pred EecHHHHhCCCeEEEeccCCcEEEEEeCC--CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 180 KVSLAEALGGTSVSLITLDGRDLNIAVTD--IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 180 ~I~l~~Al~G~~~~i~tldG~~l~v~i~~--~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+|+|.+||||+.+.+.||||+.|.+.+++ +++|+++++|+|+|||+.+++ +|||||+|+|+||+ +++++..+|++
T Consensus 259 ~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~ 335 (337)
T KOG0712|consen 259 TISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLED 335 (337)
T ss_pred ecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHh
Confidence 99999999999999999999999999864 899999999999999999875 99999999999999 99999999998
Q ss_pred Hh
Q 024880 258 AL 259 (261)
Q Consensus 258 ~l 259 (261)
+|
T Consensus 336 ~l 337 (337)
T KOG0712|consen 336 LL 337 (337)
T ss_pred hC
Confidence 76
No 34
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.90 E-value=3.7e-24 Score=157.95 Aligned_cols=81 Identities=47% Similarity=0.760 Sum_probs=70.9
Q ss_pred ceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Q 024880 174 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRA 253 (261)
Q Consensus 174 DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~ 253 (261)
||+++++|+|++|++|++++|+|+||+.++|++|+++++|++++|+|+|||...++..+|||||+|+|.+|++||++||+
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999989999999999999999999999998875689999999999999999999998
Q ss_pred H
Q 024880 254 G 254 (261)
Q Consensus 254 ~ 254 (261)
+
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 5
No 35
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=5e-14 Score=126.77 Aligned_cols=170 Identities=29% Similarity=0.476 Sum_probs=146.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEE--------c-----------CCC----------------ceecccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVV--------D-----------ANG----------------RQTPESEI 124 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~--------~-----------g~G----------------~~~~~~~~ 124 (261)
..++.++...++.+++++|.+...+..-.+.+. | +.| +...++.+
T Consensus 123 ~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~ 202 (336)
T KOG0713|consen 123 LPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDP 202 (336)
T ss_pred CCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCc
Confidence 567899999999999999998644333332222 1 112 24677889
Q ss_pred EEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEE
Q 024880 125 LTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNI 204 (261)
Q Consensus 125 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v 204 (261)
+++.+..+...+....+..++.+..-+.+||++|.+..-+|+.|.|+++||++++.+++.+|+.++..++.++|+..+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~ 282 (336)
T KOG0713|consen 203 LEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEV 282 (336)
T ss_pred eeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhh
Confidence 99999999999999999999988777889999999999999999999999999999999999999999999999998888
Q ss_pred EeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCC-CCH
Q 024880 205 AVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK-LTP 249 (261)
Q Consensus 205 ~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~-l~~ 249 (261)
+...+..|+..++.+++|||..++....+.+|++|.+.+|.+ ++.
T Consensus 283 ~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 283 SRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 888899999999999999998877788999999999999964 555
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=7.2e-11 Score=104.90 Aligned_cols=144 Identities=53% Similarity=0.936 Sum_probs=128.9
Q ss_pred CCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCce-ecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEE
Q 024880 82 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 160 (261)
Q Consensus 82 kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~-~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i 160 (261)
+...+.+.+.+++++++.++.++..+.+......+.. ......+.+.+.++|+.++.++...+|+..+...+-++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~ 237 (306)
T KOG0714|consen 158 QSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFVV 237 (306)
T ss_pred CCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCcceeEEEE
Confidence 3444777778899999999999999998876555443 567788999999999999999999999887777789999999
Q ss_pred EEEcCCCccccccceEEE--EEecHHHHhCCCeEEEeccCCcEEEEEeC-CCCCCCcEEEEcCCCCCC
Q 024880 161 DEKPHDVYKRDSNDLIVN--HKVSLAEALGGTSVSLITLDGRDLNIAVT-DIISPGFELGIPGEGMPI 225 (261)
Q Consensus 161 ~~~~h~~f~R~G~DL~~~--~~I~l~~Al~G~~~~i~tldG~~l~v~i~-~~~~pg~~~~i~g~GmP~ 225 (261)
..++|..|.|.++||.+. ..|++.+|+++....+++++++.+.+.+. +.+.++...++++++||.
T Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 238 DEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 999999999999999999 99999999999999999999998888887 899999999999999986
No 37
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=6.3e-11 Score=110.56 Aligned_cols=87 Identities=15% Similarity=0.214 Sum_probs=76.3
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v 158 (261)
.+++.||+++++|||+||+.|++++|... .| ++++|+||+|+++|++++++|+|++.+ ...+|||+|
T Consensus 272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V 339 (369)
T PRK14282 272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIV 339 (369)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999988764 33 478999999999999999999999864 346799999
Q ss_pred EEEEEcCCCccccccceEEE
Q 024880 159 VIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~~~ 178 (261)
+|++..|+.|++++.+|+.+
T Consensus 340 ~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 340 NVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999999999999887644
No 38
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.10 E-value=1.1e-10 Score=85.83 Aligned_cols=73 Identities=22% Similarity=0.388 Sum_probs=56.9
Q ss_pred CeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC--CCCccEEEEEEE
Q 024880 85 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLVFVIDE 162 (261)
Q Consensus 85 di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDl~v~i~~ 162 (261)
|++++++|||.||+.|+++++... .| ++++|+||+++++|++++++|+|.+... ...|||++++++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 689999999999999999888665 23 6899999999999999999999996433 369999999999
Q ss_pred EcCCCcc
Q 024880 163 KPHDVYK 169 (261)
Q Consensus 163 ~~h~~f~ 169 (261)
.-+..+.
T Consensus 69 ~~P~~ls 75 (81)
T PF01556_consen 69 EFPKKLS 75 (81)
T ss_dssp E--SSTS
T ss_pred ECCCCCC
Confidence 8655544
No 39
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.10 E-value=2e-10 Score=107.01 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=76.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC-CCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDl~v 158 (261)
.|++.||+++++|||.||+.|++++|.+. ..+++|+||+|+++|++|+++|+|++.++. .+|||+|
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~~-------------~g~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V 332 (365)
T PRK14290 266 QRINDDLYVDQKINFPQAALGGEIEIKLF-------------REKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLV 332 (365)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEEcC-------------CceEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999988764 236999999999999999999999986543 6899999
Q ss_pred EEEEEcCCCccccccceEEEE
Q 024880 159 VIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~~~~ 179 (261)
+|++..++.|++++.+|+.++
T Consensus 333 ~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 333 RINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999998887653
No 40
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=4.6e-10 Score=101.57 Aligned_cols=71 Identities=21% Similarity=0.322 Sum_probs=64.6
Q ss_pred cccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCC
Q 024880 169 KRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKL 247 (261)
Q Consensus 169 ~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l 247 (261)
.|+++||++++.|+|.||++|++++| +++++++.|+||+++++|++++++|+|++. |||||+|+|.-+..+
T Consensus 126 ~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f 196 (291)
T PRK14299 126 ARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF 196 (291)
T ss_pred CCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence 46799999999999999999999998 789988999999999999999999999862 999999999866543
No 41
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.04 E-value=5.1e-10 Score=104.38 Aligned_cols=86 Identities=17% Similarity=0.253 Sum_probs=74.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||++++.|||.||+.|+++.|... .| .++|.||+|+++|++|+++|+|++.++ ..+|||+|
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V 326 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII 326 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999888765 23 359999999999999999999998654 36899999
Q ss_pred EEEEEcCCCccccccceEEE
Q 024880 159 VIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~~~ 178 (261)
+|++..|+.|.++..+|+.+
T Consensus 327 ~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 327 EVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999999999988777654
No 42
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=7.1e-10 Score=104.29 Aligned_cols=86 Identities=14% Similarity=0.235 Sum_probs=72.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||+||+.|++++|.... +..+++|+||+|+++|++++++++|.+..+ ..+|||||
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tld-----------~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 342 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTLL-----------KEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLV 342 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeecC-----------CCcEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEE
Confidence 467999999999999999999999887641 024789999999999999999999998654 46899999
Q ss_pred EEEEEcCCCccccccceE
Q 024880 159 VIDEKPHDVYKRDSNDLI 176 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~ 176 (261)
+|++..++.++.+..+|+
T Consensus 343 ~~~v~~P~~l~~~q~~ll 360 (391)
T PRK14284 343 RISVETPQNLSEEQKELL 360 (391)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998888877665554
No 43
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=7e-10 Score=103.41 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=74.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC-CCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| ++++|.||+|+++|++|+++|+|++.++. ..|||+|
T Consensus 262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V 329 (365)
T PRK14285 262 KRNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLIL 329 (365)
T ss_pred EEeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEE
Confidence 46789999999999999999999988875 23 47999999999999999999999986554 4699999
Q ss_pred EEEEEcCCCccccccceE
Q 024880 159 VIDEKPHDVYKRDSNDLI 176 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~ 176 (261)
+|++..|+.|.+++..|+
T Consensus 330 ~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 330 IIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999999988876553
No 44
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.97 E-value=1.3e-09 Score=101.81 Aligned_cols=87 Identities=14% Similarity=0.205 Sum_probs=75.3
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| +++|.||+|+++|++++++|+|.+.++ ...|||||
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v 324 (371)
T PRK10767 258 ERDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYC 324 (371)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence 46789999999999999999999888654 23 689999999999999999999998643 46799999
Q ss_pred EEEEEcCCCccccccceEEEE
Q 024880 159 VIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~~~~ 179 (261)
+|++..++.+++++.+|+.++
T Consensus 325 ~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 325 QVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999988876543
No 45
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.97 E-value=1.1e-09 Score=102.62 Aligned_cols=87 Identities=16% Similarity=0.247 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+... ...|||||
T Consensus 261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V 327 (377)
T PRK14298 261 ERVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLV 327 (377)
T ss_pred EEEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999888765 23 378999999999999999999998544 35799999
Q ss_pred EEEEEcCCCccccccceEEEE
Q 024880 159 VIDEKPHDVYKRDSNDLIVNH 179 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~~~~ 179 (261)
+|++..++.+++++.+|+.++
T Consensus 328 ~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 328 KVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999887776543
No 46
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.96 E-value=3.3e-09 Score=96.68 Aligned_cols=75 Identities=23% Similarity=0.434 Sum_probs=62.9
Q ss_pred ccccceEEEEEecHHHHhCCCeEEE----eccC--C-------cEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEE
Q 024880 170 RDSNDLIVNHKVSLAEALGGTSVSL----ITLD--G-------RDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLR 236 (261)
Q Consensus 170 R~G~DL~~~~~I~l~~Al~G~~~~i----~tld--G-------~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~ 236 (261)
++++||++++.|+|.||++|+..+| ++++ | +++.|+||+++++|++++++|+|+|...+ ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 4689999999999999999995444 4444 3 46899999999999999999999997543 5689999
Q ss_pred EEEEEECCCC
Q 024880 237 IKFEVKFPTK 246 (261)
Q Consensus 237 I~~~V~~P~~ 246 (261)
|+|+|. |..
T Consensus 194 v~i~v~-ph~ 202 (306)
T PRK10266 194 LVIHIA-PHP 202 (306)
T ss_pred EEEEEc-CCC
Confidence 999999 643
No 47
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.94 E-value=2e-09 Score=100.00 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=71.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC-CCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDl~v 158 (261)
.+++.||++++.|||+||+.|+++.|... .| +++|.||+|+++|++++++|+|++.++. .+|||||
T Consensus 263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i 329 (354)
T TIGR02349 263 ERDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLV 329 (354)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEE
Confidence 46789999999999999999999888764 22 6899999999999999999999986543 6899999
Q ss_pred EEEEEcCCCccccccce
Q 024880 159 VIDEKPHDVYKRDSNDL 175 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL 175 (261)
+|++..++.++++..++
T Consensus 330 ~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 330 TVKVETPKNLSKEQKEL 346 (354)
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99999988887776554
No 48
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.94 E-value=2.3e-09 Score=100.79 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=68.0
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
.+++.||+++++|||+||+.|.+++|... .| .++|+||+|+++|++|+++|+|++.....+|||||+
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~ 355 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT 355 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 46799999999999999999999888765 22 589999999999999999999998655568999999
Q ss_pred EEEEcCCCccccc
Q 024880 160 IDEKPHDVYKRDS 172 (261)
Q Consensus 160 i~~~~h~~f~R~G 172 (261)
|++.-+.....+.
T Consensus 356 ~~v~~P~~Ls~~q 368 (392)
T PRK14279 356 VKVAVPPNLDGAA 368 (392)
T ss_pred EEEECCCCCCHHH
Confidence 9999776554433
No 49
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.92 E-value=2.3e-09 Score=100.20 Aligned_cols=84 Identities=14% Similarity=0.251 Sum_probs=71.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||++++.|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+... ...|||+|
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHV 324 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEE
Confidence 46789999999999999999999888765 23 479999999999999999999998544 35799999
Q ss_pred EEEEEcCCCccccccceE
Q 024880 159 VIDEKPHDVYKRDSNDLI 176 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~ 176 (261)
+|++..++.++++...|+
T Consensus 325 ~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 325 QVRVVTPKNLTEKEKELM 342 (371)
T ss_pred EEEEEcCCCCCHHHHHHH
Confidence 999999998887765544
No 50
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.92 E-value=3.2e-09 Score=99.22 Aligned_cols=82 Identities=15% Similarity=0.263 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| ++++|+||+|+++|++|+++++|++.++ ..+|||+|
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V 328 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLT 328 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999888775 22 4799999999999999999999998654 46899999
Q ss_pred EEEEEcCCCcccccc
Q 024880 159 VIDEKPHDVYKRDSN 173 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~ 173 (261)
+|++..+..+.-+..
T Consensus 329 ~~~v~~P~~ls~~qk 343 (372)
T PRK14300 329 HIHVEVPKNLSKRQR 343 (372)
T ss_pred EEEEECCCCCCHHHH
Confidence 999998877655443
No 51
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=3.4e-09 Score=99.14 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=71.3
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC-CCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+.++. .+|||+|
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I 326 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV 326 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999888665 23 3899999999999999999999986543 5799999
Q ss_pred EEEEEcCCCccccccceE
Q 024880 159 VIDEKPHDVYKRDSNDLI 176 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~ 176 (261)
+|++..++.+..+..+|+
T Consensus 327 ~~~V~~P~~l~~~q~~~l 344 (373)
T PRK14301 327 EVSVVTPTKLTKRQEELL 344 (373)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998887766655443
No 52
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=5.3e-09 Score=98.28 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=67.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
.|++.||+++++|||+||+.|++++|... .| ++++|+||+|+++|++|+++|+|.+..+..+|||||+
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~ 349 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVT 349 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEE
Confidence 46799999999999999999999888654 23 4799999999999999999999998655568999999
Q ss_pred EEEEcCCCcccc
Q 024880 160 IDEKPHDVYKRD 171 (261)
Q Consensus 160 i~~~~h~~f~R~ 171 (261)
|++.-......+
T Consensus 350 ~~v~~P~~Ls~~ 361 (389)
T PRK14295 350 VEVAVPKDLSGK 361 (389)
T ss_pred EEEECCCCCCHH
Confidence 999966554433
No 53
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=8.6e-09 Score=96.70 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=65.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||+++++|||+||+.|++++|... .| ++++|.||+|+++|++|+++|+|++.++ ..+|||+|
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V 338 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVV 338 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999998875 33 4789999999999999999999998654 36899999
Q ss_pred EEEEEcCC
Q 024880 159 VIDEKPHD 166 (261)
Q Consensus 159 ~i~~~~h~ 166 (261)
+|++.-+.
T Consensus 339 ~~~V~~P~ 346 (382)
T PRK14291 339 RVHIDVPK 346 (382)
T ss_pred EEEEEeCC
Confidence 99998554
No 54
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=5.1e-09 Score=98.33 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=69.8
Q ss_pred cccceEEEEEecHHHHhCCCeEEEecc-----------------------------------------------------
Q 024880 171 DSNDLIVNHKVSLAEALGGTSVSLITL----------------------------------------------------- 197 (261)
Q Consensus 171 ~G~DL~~~~~I~l~~Al~G~~~~i~tl----------------------------------------------------- 197 (261)
++.|+.+.+.|+|.||+.|++.+|...
T Consensus 126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G 205 (386)
T PRK14289 126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG 205 (386)
T ss_pred CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence 478999999999999999998666431
Q ss_pred -------------------CCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Q 024880 198 -------------------DGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGL 255 (261)
Q Consensus 198 -------------------dG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l 255 (261)
+.+.+.|+||+++++|++++|+|+|+|...+ ..+|||||+|+|..|+.++.+..+++
T Consensus 206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDL~v~v~v~~~~~f~r~g~DL~ 281 (386)
T PRK14289 206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHG-GVNGDLLVVIEEEPHPELIRDENDLI 281 (386)
T ss_pred cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCC-CCCccEEEEEEEecCCccccccccee
Confidence 1136889999999999999999999997543 56799999999999998877766554
No 55
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=5.5e-09 Score=97.56 Aligned_cols=83 Identities=13% Similarity=0.243 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC-CCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDl~v 158 (261)
.+++.||+++++|||.||++|++++|... .| +.++|+||+++++|+.++++|+|.+.++. ..|||+|
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v 321 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KG------DELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV 321 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeecC------CC------CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999888776 33 36899999999999999999999986654 4699999
Q ss_pred EEEEEcCCCccccccc
Q 024880 159 VIDEKPHDVYKRDSND 174 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~D 174 (261)
+|++..++.+..+...
T Consensus 322 ~~~v~~P~~ls~~q~~ 337 (369)
T PRK14288 322 ELQVIYPKSLNKEQQE 337 (369)
T ss_pred EEEEECCCCCCHHHHH
Confidence 9999988877665543
No 56
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=5.1e-09 Score=97.98 Aligned_cols=86 Identities=16% Similarity=0.231 Sum_probs=74.3
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCC--CCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ--LPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~--~~GDl~ 157 (261)
.+++.|++++++|||.||+.|++++|... .| .++|.||+++++|++++++|+|.+.++. ..||||
T Consensus 263 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~ 329 (374)
T PRK14293 263 RRDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHL 329 (374)
T ss_pred ChhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEE
Confidence 46789999999999999999999888876 33 3689999999999999999999986543 579999
Q ss_pred EEEEEEcCCCccccccceEEE
Q 024880 158 FVIDEKPHDVYKRDSNDLIVN 178 (261)
Q Consensus 158 v~i~~~~h~~f~R~G~DL~~~ 178 (261)
|+|++..++.+++++.+|+.+
T Consensus 330 v~~~v~~P~~l~~~~~~l~~~ 350 (374)
T PRK14293 330 ITVKVKIPTRISDEERELLEK 350 (374)
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 999999999899888777544
No 57
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=8.2e-09 Score=96.76 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=67.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||+||+.|++++|... .| .++|+||+|+++|++++++|+|.+.++ ..+|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 332 (380)
T PRK14276 266 ERDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHV 332 (380)
T ss_pred eeecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence 46789999999999999999999988775 23 479999999999999999999998654 35799999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++.-......+.
T Consensus 333 ~~~v~~P~~l~~~q 346 (380)
T PRK14276 333 TVNIVTPTKLNDAQ 346 (380)
T ss_pred EEEEECCCCCCHHH
Confidence 99999666554443
No 58
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.81 E-value=1.1e-08 Score=95.53 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||.||++|++++|... .| ++++|+||+|+++|++++++|+|.+..+ ...|||+|
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V 333 (372)
T PRK14286 266 ERQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHV 333 (372)
T ss_pred EEecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEE
Confidence 46789999999999999999999888664 33 4789999999999999999999998644 35799999
Q ss_pred EEEEEcCCCccccccce
Q 024880 159 VIDEKPHDVYKRDSNDL 175 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL 175 (261)
+|++.-+..+..+..+|
T Consensus 334 ~~~V~~P~~Ls~~qk~~ 350 (372)
T PRK14286 334 IVKIEIPKKITRRQREL 350 (372)
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99999777665555443
No 59
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=1.4e-08 Score=95.72 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+.+. ...|||||
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V 348 (397)
T PRK14281 282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYV 348 (397)
T ss_pred EEecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999888865 23 479999999999999999999998544 35799999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++.-+.....+.
T Consensus 349 ~~~V~~P~~Ls~~q 362 (397)
T PRK14281 349 RVNVFVPKEVSHQD 362 (397)
T ss_pred EEEEEcCCCCCHHH
Confidence 99998665544433
No 60
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=1.6e-08 Score=94.65 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||++++.|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+... ...|||+|
T Consensus 263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v 329 (376)
T PRK14280 263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYV 329 (376)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999888755 22 479999999999999999999998543 36799999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++........+.
T Consensus 330 ~~~v~~P~~Ls~~q 343 (376)
T PRK14280 330 VVRVVTPTKLTDRQ 343 (376)
T ss_pred EEEEECCCCCCHHH
Confidence 99999666554433
No 61
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.77 E-value=1.4e-08 Score=94.96 Aligned_cols=84 Identities=14% Similarity=0.190 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.||+++++|||.||+.|++++|... .| ..+|.||+|+++|++++++++|++.+. ..+|||||
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL------DG-------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV 324 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC------CC-------CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999988855 23 236999999999999999999998653 46799999
Q ss_pred EEEEEcCCCccccccceE
Q 024880 159 VIDEKPHDVYKRDSNDLI 176 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL~ 176 (261)
+|++..++.+..+...|+
T Consensus 325 ~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14292 325 EYEIAVPKQLSPEAREAL 342 (371)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999987776655443
No 62
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=2.1e-08 Score=94.07 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=66.6
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||.||+.|++++|... .| .++|.||+|+++|++++++|+|.+..+ ...|||||
T Consensus 268 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v 334 (380)
T PRK14297 268 KRKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYV 334 (380)
T ss_pred EEeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEE
Confidence 35789999999999999999999888775 23 479999999999999999999997543 36799999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++.-...+..+.
T Consensus 335 ~~~v~~P~~ls~~q 348 (380)
T PRK14297 335 TVIVDIPKKLNSKQ 348 (380)
T ss_pred EEEEEcCCCCCHHH
Confidence 99998665544333
No 63
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=2.6e-08 Score=93.31 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=67.1
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||.||+.|++++|... . ..+++|.||+|+++|++++++|+|.+... ..+|||||
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d------~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V 326 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------L------DGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA 326 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEecC------C------CCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46799999999999999999999888754 1 23789999999999999999999998643 46899999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++.-...+..+.
T Consensus 327 ~~~V~~P~~Ls~~q 340 (378)
T PRK14278 327 HVEVVVPTRLDHED 340 (378)
T ss_pred EEEEEcCCCCCHHH
Confidence 99998665444433
No 64
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=5.7e-08 Score=91.28 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=66.0
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.|++.||+++++|||.||+.|++++|... .| .++|.||+|+++|++++++|+|.+..+ ...|||||
T Consensus 275 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v 341 (386)
T PRK14277 275 KREGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIV 341 (386)
T ss_pred EEecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999888765 33 379999999999999999999997543 35799999
Q ss_pred EEEEEcCCCccccc
Q 024880 159 VIDEKPHDVYKRDS 172 (261)
Q Consensus 159 ~i~~~~h~~f~R~G 172 (261)
+|++.-......+.
T Consensus 342 ~~~V~~P~~Ls~~q 355 (386)
T PRK14277 342 KVYIEVPKKLTEKQ 355 (386)
T ss_pred EEEEEeCCCCCHHH
Confidence 99998655444333
No 65
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=6.2e-08 Score=90.81 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC-CCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDl~v 158 (261)
.+++.|+++++.|||+||+.|+++.|... .| +++|.||+|+++|++++++|+|.+... ...|||||
T Consensus 266 ~r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v 332 (378)
T PRK14283 266 RREGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYV 332 (378)
T ss_pred EEecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999888754 22 689999999999999999999997543 36799999
Q ss_pred EEEEEcCCCcccc
Q 024880 159 VIDEKPHDVYKRD 171 (261)
Q Consensus 159 ~i~~~~h~~f~R~ 171 (261)
+|++.-.+....+
T Consensus 333 ~~~v~~P~~l~~~ 345 (378)
T PRK14283 333 KVKVVVPKKLSPK 345 (378)
T ss_pred EEEEEeCCCCCHH
Confidence 9999855444433
No 66
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=5.7e-08 Score=89.81 Aligned_cols=83 Identities=16% Similarity=0.243 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF 158 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~v 158 (261)
.|.+.||+++++|++.+|.+|.+.++... .| .++|+||||++.|++++++|+|.+.. +...|||+|
T Consensus 260 ~R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v 326 (371)
T COG0484 260 ERDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYV 326 (371)
T ss_pred EECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEE
Confidence 46789999999999999999999988876 34 39999999999999999999999854 345799999
Q ss_pred EEEEEcCCCccccccce
Q 024880 159 VIDEKPHDVYKRDSNDL 175 (261)
Q Consensus 159 ~i~~~~h~~f~R~G~DL 175 (261)
+|++.-...+..+...|
T Consensus 327 ~v~v~~P~~ls~~q~~l 343 (371)
T COG0484 327 RVKVETPKNLSDEQKEL 343 (371)
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 99999887766555444
No 67
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.63 E-value=8.5e-08 Score=89.68 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=65.3
Q ss_pred CC-CCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCC--CCCCccEE
Q 024880 81 RK-PPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP--NQLPADLV 157 (261)
Q Consensus 81 ~k-g~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDl~ 157 (261)
++ +.||+++++|||.||+.|++++|... .| .++|+||+++++|++++++|+|.+.. ....||||
T Consensus 270 R~~G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~ 336 (372)
T PRK14296 270 IINNNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLI 336 (372)
T ss_pred EeCCCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEE
Confidence 54 79999999999999999999888766 34 38999999999999999999998732 23579999
Q ss_pred EEEEEEcCCCccccc
Q 024880 158 FVIDEKPHDVYKRDS 172 (261)
Q Consensus 158 v~i~~~~h~~f~R~G 172 (261)
|+|++.-......+.
T Consensus 337 V~~~V~~P~~Ls~~q 351 (372)
T PRK14296 337 IKVNIVVPKNLSKKE 351 (372)
T ss_pred EEEEEECCCCCCHHH
Confidence 999999665544433
No 68
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.61 E-value=9.3e-08 Score=90.68 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=66.5
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCC--CCCCceEEeCCCCCCCCC--CCCcc
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPN--QLPAD 155 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GD 155 (261)
.|++.||+++++|||.||++|.+++|... .| +.++|+||+| +++|++++++|+|.+... ...||
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG------~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD 337 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL------DG------RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN 337 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CC------CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence 46799999999999999999999888765 34 3689999999 999999999999997543 35799
Q ss_pred EEEEEEEEcC--CCcccc
Q 024880 156 LVFVIDEKPH--DVYKRD 171 (261)
Q Consensus 156 l~v~i~~~~h--~~f~R~ 171 (261)
|||+++|.-. ..+..+
T Consensus 338 L~V~~~V~~P~~~~Ls~~ 355 (421)
T PTZ00037 338 LYVTFEVIFPVDRKFTNE 355 (421)
T ss_pred EEEEEEEEcCCCCCCCHH
Confidence 9999999865 444433
No 69
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=4.5e-07 Score=81.95 Aligned_cols=96 Identities=17% Similarity=0.302 Sum_probs=79.2
Q ss_pred CCCeEEEEecChhhhhcCcEEEEEEEEEEEcC---------------------CC-------------------------
Q 024880 83 PPPVESKLPCSLEELYSGSTRKMKISRTVVDA---------------------NG------------------------- 116 (261)
Q Consensus 83 g~di~~~l~lsLee~~~G~~k~i~~~r~~~~g---------------------~G------------------------- 116 (261)
+.++++.+.++|++|..|+.+.+.+.....|. .|
T Consensus 137 ~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~ 216 (288)
T KOG0715|consen 137 DKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL 216 (288)
T ss_pred CcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCcccccccccCCcceeecccccccceec
Confidence 45777778888888888888888777654420 11
Q ss_pred ----------ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEEEEEecHHH
Q 024880 117 ----------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 185 (261)
Q Consensus 117 ----------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~l~~ 185 (261)
..+...+.+.|.+|+|+.++.+|++.+.+.. ||++.+.|.+++.|+|++.|+++++.|++.+
T Consensus 217 ~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 217 RDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred cchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence 0566788999999999999999999998753 9999999999999999999999999998753
No 70
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.46 E-value=4.5e-07 Score=89.91 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=63.0
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
.|+|.||++.+.|||.+|++|++++|... .| .++|.||+|+++|++++++|+|.+.....+|||+|+
T Consensus 742 rRdGdDL~~~v~ISL~EALLGgtIeIpTL------DG-------rVkLkIPpgTqpGqvLRIkGKGMP~~~~~RGDLyV~ 808 (871)
T TIGR03835 742 QIKNDGLHVAALVDPLVAYNGGIIDVFGP------NK-------LFNVRIPGGIKVNDQVIFKDLGLTKTKYDKGSLIVH 808 (871)
T ss_pred EEECCeEEEEEecCHHHHhcCCEEEeeCC------CC-------CEEEeeCCCCCCCcEEEECCCCCCCCCCCCCCEEEE
Confidence 57899999999999999999999888776 33 489999999999999999999997444458999999
Q ss_pred EEEEc
Q 024880 160 IDEKP 164 (261)
Q Consensus 160 i~~~~ 164 (261)
|.+..
T Consensus 809 f~V~~ 813 (871)
T TIGR03835 809 LYYSS 813 (871)
T ss_pred EEEee
Confidence 99874
No 71
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.25 E-value=0.00097 Score=61.24 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=64.1
Q ss_pred CCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCC--CCCCceEEeCCCCCCCCCCCCccEEE
Q 024880 81 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQLPADLVF 158 (261)
Q Consensus 81 ~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDl~v 158 (261)
+++.|+.++++++|.||..|-.+.+... +| +.+++.++|| +++|++++++++|++......||||+
T Consensus 249 Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi 316 (337)
T KOG0712|consen 249 RRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYI 316 (337)
T ss_pred ecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEEE
Confidence 5689999999999999999988888722 34 5899999999 99999999999999866556999999
Q ss_pred EEEEEcCC
Q 024880 159 VIDEKPHD 166 (261)
Q Consensus 159 ~i~~~~h~ 166 (261)
.++|+-.+
T Consensus 317 ~~~v~fp~ 324 (337)
T KOG0712|consen 317 KFEVKFPK 324 (337)
T ss_pred EEEEEcCC
Confidence 99998555
No 72
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=92.01 E-value=0.51 Score=39.35 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=68.3
Q ss_pred CeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEc
Q 024880 85 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 164 (261)
Q Consensus 85 di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~ 164 (261)
++..++.+++.+++.+..+.+.+.. .....+.++.++..+..+++.+++.... ...++.+..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 216 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLL------------GKALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKELSKR 216 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccc------------cccccccCCcccccCceeeecccCCcCC-CCcccceeeeeccC
Confidence 7889999999999999888887762 2344489999999999999999998766 77899999999999
Q ss_pred CCCccccccce
Q 024880 165 HDVYKRDSNDL 175 (261)
Q Consensus 165 h~~f~R~G~DL 175 (261)
|+.|..+++++
T Consensus 217 ~~~~~~~~~~~ 227 (237)
T COG2214 217 HPPFALEGDDK 227 (237)
T ss_pred CCCccccCCcc
Confidence 99999999999
No 73
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=64.82 E-value=8.1 Score=25.97 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=20.0
Q ss_pred CCCCEEEEEEEECCCC--CCHHHHHHH
Q 024880 231 NRGDLRIKFEVKFPTK--LTPEQRAGL 255 (261)
Q Consensus 231 ~~GDL~I~~~V~~P~~--l~~~~~~~l 255 (261)
+.||+.|-|+|.+|+- +|+++-+.|
T Consensus 26 k~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 26 KNGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred cCCCEEEEEEecCCeeEEechhHhHHh
Confidence 4599999999999994 677766554
No 74
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=44.91 E-value=29 Score=23.85 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=18.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHh
Q 024880 238 KFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~l 259 (261)
..+..||.+||++||..+-.+.
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la 38 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLA 38 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHH
Confidence 5678899999999999987654
No 75
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=40.87 E-value=1.1e+02 Score=24.94 Aligned_cols=70 Identities=26% Similarity=0.246 Sum_probs=58.7
Q ss_pred ceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCC
Q 024880 174 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK 246 (261)
Q Consensus 174 DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~ 246 (261)
++...+.++..+++.+....+.-.......+.++.....+..+++++++.... ...++++.++.+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 219 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHPP 219 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCCC
Confidence 78889999999999998888887777655578999999999999999998765 45799999988876543
No 76
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=34.34 E-value=1.1e+02 Score=20.16 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=27.8
Q ss_pred CCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCC
Q 024880 189 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM 223 (261)
Q Consensus 189 G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~Gm 223 (261)
+-...|-|.||.-++|+.++..+-|+.+.+.-+-.
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDI 39 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhh
Confidence 45677889999999999887788898888775543
No 77
>PRK14051 negative regulator GrlR; Provisional
Probab=32.83 E-value=2.2e+02 Score=22.02 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=39.7
Q ss_pred CCccEEEEEEEEcCCCccccccceEEEEEec--HHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCC
Q 024880 152 LPADLVFVIDEKPHDVYKRDSNDLIVNHKVS--LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPI 225 (261)
Q Consensus 152 ~~GDl~v~i~~~~h~~f~R~G~DL~~~~~I~--l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~ 225 (261)
+..|+++++.-.-|+.-+.-+-+--+.+.|+ +.+.-.++++.-.--+..+|.|.+.+ +-=..+.|++-|||.
T Consensus 46 Ed~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~a--kFI~~LvI~~~~~~~ 119 (123)
T PRK14051 46 EDEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYA--KFIEPLVIKNTGMPQ 119 (123)
T ss_pred ccceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEee--eeeeeeEEccCCCcc
Confidence 3467777777666655444344444566666 33333344433322344456665543 222448899999995
No 78
>cd05792 S1_eIF1AD_like S1_eIF1AD_like: eukaryotic translation initiation factor 1A domain containing protein (eIF1AD)-like, S1-like RNA-binding domain. eIF1AD is also known as MGC11102 protein. Little is known about the function of eIF1AD. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins, including translation initiation factor IF1A (also referred to as eIF1A in eukaryotes). eIF1A is essential for translation initiation. eIF1A acts synergistically with eIF1 to mediate assembly of ribosomal initiation complexes at the initiation codon and maintain the accuracy of this process by recognizing and destabilizing aberrant preinitiation complexes from the mRNA. Without eIF1A and eIF1, 43S ribosomal preinitiation complexes can bind to the cap-proximal region, but are unable to reach the initiation codon. eIF1a also enhances the formation of 5'-terminal complexes in the presence of other translation initiation factors.
Probab=30.84 E-value=1.4e+02 Score=21.59 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=35.5
Q ss_pred HhCCC-eEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 186 ALGGT-SVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 186 Al~G~-~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+++|. -++|.+.||.+..+.+|. -++-|+.+.+. |...+...+||++- .|+++|.+.|++
T Consensus 8 ~~~G~n~~~V~~~dG~~~l~~iP~KfRk~iWIkrGd~VlV~----p~~~~~kvkgeIv~--------i~~~~qvk~L~k 74 (78)
T cd05792 8 GSKGNNLHEVETPNGSRYLVSMPTKFRKNIWIKRGDFVLVE----PIEEGDKVKAEIVK--------ILTRDHVKYIKE 74 (78)
T ss_pred EcCCCcEEEEEcCCCCEEEEEechhhcccEEEEeCCEEEEE----ecccCCceEEEEEE--------EECHHHHHHHHH
Confidence 34444 588999999998999986 34556665553 32221123344332 256777666665
No 79
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=29.81 E-value=87 Score=20.75 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=15.3
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHh
Q 024880 236 RIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 236 ~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
+|++++. ++..|++||+.|-+.+
T Consensus 2 ~i~i~i~-~~grt~eqK~~l~~~i 24 (63)
T TIGR00013 2 FVNIYIL-KEGRTDEQKRQLIEGV 24 (63)
T ss_pred EEEEEEC-CCCCCHHHHHHHHHHH
Confidence 4555555 3568999988876654
No 80
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=29.29 E-value=61 Score=29.13 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=24.9
Q ss_pred EEEEecHHHHhCC-CeEEEeccCCcEEEEEeC
Q 024880 177 VNHKVSLAEALGG-TSVSLITLDGRDLNIAVT 207 (261)
Q Consensus 177 ~~~~I~l~~Al~G-~~~~i~tldG~~l~v~i~ 207 (261)
|+.+|-|+||+.| |...|++.|+..=.+.|.
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiT 49 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEIT 49 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEc
Confidence 4568899999999 579999999876566663
No 81
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=28.27 E-value=64 Score=29.22 Aligned_cols=53 Identities=19% Similarity=0.287 Sum_probs=38.1
Q ss_pred HHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCC
Q 024880 184 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLT 248 (261)
Q Consensus 184 ~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~ 248 (261)
.++..|.. .|..- +.+.|.+|+++..+.++++++.+-- ||+|.+.|.--....
T Consensus 220 c~~~~g~~-~v~~~--k~i~i~~~~g~~~~~~l~~~~~~~~---------~l~v~~~v~~~~~~~ 272 (288)
T KOG0715|consen 220 CQACSGAG-QVRRA--KDIMIVLPAGVRSADTLRFAGHGND---------DLFVRLIVAKSPSFR 272 (288)
T ss_pred HHHhhcch-hhhhh--eeEEeecCcccccccEEEEecCCcc---------eEEEEEEeccCcccc
Confidence 44555544 33322 3588999999999999999998632 999999998655444
No 82
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=27.01 E-value=83 Score=21.44 Aligned_cols=22 Identities=36% Similarity=0.511 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHh
Q 024880 238 KFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~l 259 (261)
.-+..||..||+.+|..+-++.
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a 37 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLC 37 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHH
Confidence 3567899999999999987764
No 83
>TIGR00523 eIF-1A eukaryotic/archaeal initiation factor 1A. Recommended nomenclature: eIF-1A for eukaryotes, aIF-1A for Archaea. Also called eIF-4C
Probab=26.86 E-value=2.5e+02 Score=21.26 Aligned_cols=61 Identities=25% Similarity=0.265 Sum_probs=36.1
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+++-+..+.|...||.++...||. .+++|+.+.|. |..-+...+||++-+ ++++|...|++
T Consensus 27 ~~lG~~~~~V~~~dG~~~la~i~GK~Rk~iwI~~GD~VlVs----p~d~~~~~kg~Iv~r--------~~~~qv~~L~~ 93 (99)
T TIGR00523 27 QMLGAGRVKVRCLDGKTRLGRIPGKLKKRIWIREGDVVIVK----PWEFQGDDKCDIVWR--------YTKTQVEWLKR 93 (99)
T ss_pred EEcCCCEEEEEeCCCCEEEEEEchhhcccEEecCCCEEEEE----EccCCCCccEEEEEE--------cCHHHHHHHHH
Confidence 344445677777788877777774 46677777772 322211235665432 45666666654
No 84
>PLN00208 translation initiation factor (eIF); Provisional
Probab=25.71 E-value=2.3e+02 Score=23.06 Aligned_cols=60 Identities=18% Similarity=0.276 Sum_probs=38.2
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
++|-+..+.|...||.++...||- .+++|+.+.|. +.... ..+||++-+ ++++|...|++
T Consensus 40 ~~lGn~~~~V~c~dG~~rLa~IpGKmRKrIWI~~GD~VlVe---l~~~d--~~KgdIv~r--------y~~dqvr~Lkk 105 (145)
T PLN00208 40 RMLGNGRCEALCIDGTKRLCHIRGKMRKKVWIAAGDIILVG---LRDYQ--DDKADVILK--------YMPDEARLLKA 105 (145)
T ss_pred EEcCCCEEEEEECCCCEEEEEEeccceeeEEecCCCEEEEE---ccCCC--CCEEEEEEE--------cCHHHHHHHHH
Confidence 344455788888888877777774 57788888887 22211 345665543 45666666654
No 85
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=24.40 E-value=97 Score=21.16 Aligned_cols=22 Identities=18% Similarity=0.301 Sum_probs=18.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHh
Q 024880 238 KFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~l 259 (261)
.-++.||..||+.+|.++-++.
T Consensus 17 ~~~l~f~p~lt~~eR~~vH~~a 38 (60)
T cd02640 17 IRDMVFSPEFSKEERALIHQIA 38 (60)
T ss_pred cceEEcCCCCCHHHHHHHHHHH
Confidence 3467899999999999987764
No 86
>cd02784 MopB_CT_PHLH The MopB_CT_PHLH CD includes a group of related uncharacterized putative hydrogenase-like homologs (PHLH) of molybdopterin binding proteins. This CD is of the PHLH region homologous to the conserved molybdopterin-binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=22.95 E-value=3.1e+02 Score=21.79 Aligned_cols=47 Identities=21% Similarity=0.097 Sum_probs=36.8
Q ss_pred EEEecHHHHh-----CCCeEEEeccCCc-EEEEEeCCCCCCCcEEEEcCCCCC
Q 024880 178 NHKVSLAEAL-----GGTSVSLITLDGR-DLNIAVTDIISPGFELGIPGEGMP 224 (261)
Q Consensus 178 ~~~I~l~~Al-----~G~~~~i~tldG~-~l~v~i~~~~~pg~~~~i~g~GmP 224 (261)
.+.|+..+|- .|..|+|.+..|+ .+.+.|.+.+.||.+..-.|.|--
T Consensus 39 ~v~InP~dA~~lGI~dGD~V~V~s~~G~i~~~a~vt~~i~pgvV~i~~G~G~~ 91 (137)
T cd02784 39 AALVSPRTAEALGLLQGDVVRIRRGGRTIELPVWIQPGHAEGVVLLALGYGRT 91 (137)
T ss_pred eEEECHHHHHHcCCCCCCEEEEEeCCeEEEEEEEECCCcCCCEEEEecccCcc
Confidence 3777888876 4778999999997 344556789999999988888764
No 87
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=22.94 E-value=1e+02 Score=20.96 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=17.7
Q ss_pred EEEECCCCCCHHHHHHHHHHh
Q 024880 239 FEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 239 ~~V~~P~~l~~~~~~~l~~~l 259 (261)
-.+.||.+|++.||..+-++.
T Consensus 18 ~~l~F~p~ls~~eR~~vH~lA 38 (60)
T cd02641 18 TELEFPPTLSSHDRLLVHELA 38 (60)
T ss_pred CcEECCCCCCHHHHHHHHHHH
Confidence 357899999999999988764
No 88
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=22.78 E-value=1.3e+02 Score=22.14 Aligned_cols=25 Identities=28% Similarity=0.432 Sum_probs=20.9
Q ss_pred EEEEEEEECCC-CCCHHHHHHHHHHh
Q 024880 235 LRIKFEVKFPT-KLTPEQRAGLKRAL 259 (261)
Q Consensus 235 L~I~~~V~~P~-~l~~~~~~~l~~~l 259 (261)
.+.-++|+.|. +|+++|++-|+.+.
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~~~~~l~ 87 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKEWIDKLR 87 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHHHHHHHH
Confidence 57788899995 69999999998764
No 89
>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site. Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].
Probab=22.72 E-value=97 Score=26.32 Aligned_cols=21 Identities=43% Similarity=0.602 Sum_probs=17.4
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q 024880 238 KFEVKFPTKLTPEQRAGLKRA 258 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~ 258 (261)
.|.|.||..++.++|.+|-.+
T Consensus 190 ~f~i~Fp~~l~~~~Kalll~a 210 (221)
T PF03803_consen 190 NFVIEFPPDLDVEQKALLLGA 210 (221)
T ss_pred eEEEEcCCCCCHHHHHHHHHH
Confidence 566889999999999998653
No 90
>cd05793 S1_IF1A S1_IF1A: Translation initiation factor IF1A, also referred to as eIF1A in eukaryotes and aIF1A in archaea, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. IF1A is essential for translation initiation. eIF1A acts synergistically with eIF1 to mediate assembly of ribosomal initiation complexes at the initiation codon and maintain the accuracy of this process by recognizing and destabilizing aberrant preinitiation complexes from the mRNA. Without eIF1A and eIF1, 43S ribosomal preinitiation complexes can bind to the cap-proximal region, but are unable to reach the initiation codon. eIF1a also enhances the formation of 5'-terminal complexes in the presence of other translation initiation factors. This protein family is only found in eukaryotes and archaea.
Probab=22.69 E-value=2.9e+02 Score=19.72 Aligned_cols=60 Identities=23% Similarity=0.354 Sum_probs=36.3
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+++-+..+.|...||.++...+|. .+++|+.+.+. +..-+ ..+|+++-+ ++++|-+.|++
T Consensus 8 ~~~g~~~~~V~~~~g~~~la~i~gK~rk~iwI~~GD~V~Ve----~~~~d-~~kg~Iv~r--------~~~~~v~~L~~ 73 (77)
T cd05793 8 KMLGNGRLEVRCFDGKKRLCRIRGKMRKRVWINEGDIVLVA----PWDFQ-DDKADIIYK--------YTPDEVRWLKR 73 (77)
T ss_pred EEcCCCEEEEEECCCCEEEEEEchhhcccEEEcCCCEEEEE----ecccc-CCEEEEEEE--------cCHHHHHHHHH
Confidence 444556788888899888888875 45566666665 11111 234554432 45667666665
No 91
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=22.51 E-value=1.5e+02 Score=24.16 Aligned_cols=29 Identities=28% Similarity=0.590 Sum_probs=26.9
Q ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 231 NRGDLRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 231 ~~GDL~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
.+|+-.+.|...-|..++++|++++.++.
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I 136 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVI 136 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999876
No 92
>cd02792 MopB_CT_Formate-Dh-Na-like Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. This CD (MopB_CT_Formate-Dh-Na-like) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=21.69 E-value=3.5e+02 Score=20.18 Aligned_cols=46 Identities=22% Similarity=0.054 Sum_probs=34.6
Q ss_pred EEEecHHHHh-----CCCeEEEeccCCc-EEEEEeCCCCCCCcEEEEcCCCC
Q 024880 178 NHKVSLAEAL-----GGTSVSLITLDGR-DLNIAVTDIISPGFELGIPGEGM 223 (261)
Q Consensus 178 ~~~I~l~~Al-----~G~~~~i~tldG~-~l~v~i~~~~~pg~~~~i~g~Gm 223 (261)
.+.|+..+|. .|..|.|.+..|+ .+.|++.+.+++|.+..-.+.+.
T Consensus 36 ~v~i~p~dA~~lgi~~Gd~V~v~s~~G~~~~~v~v~~~i~~g~v~~~~g~~~ 87 (122)
T cd02792 36 FVEISPELAAERGIKNGDMVWVSSPRGKIKVKALVTDRVKPHEVGIPYHWGG 87 (122)
T ss_pred EEEECHHHHHHcCCCCCCEEEEEcCCceEEEEEEECCCcCCCEEEEecccCc
Confidence 3667777765 4778999999997 45666788999998887766543
No 93
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=21.38 E-value=1.4e+02 Score=23.09 Aligned_cols=42 Identities=21% Similarity=0.440 Sum_probs=29.3
Q ss_pred EEeCCCCCCCcEEEEcCCCCCCCCC-----CCCCCCEEEEEEEECCC
Q 024880 204 IAVTDIISPGFELGIPGEGMPIARE-----PGNRGDLRIKFEVKFPT 245 (261)
Q Consensus 204 v~i~~~~~pg~~~~i~g~GmP~~~~-----~~~~GDL~I~~~V~~P~ 245 (261)
..+|...++|+.+.|.|.=.+..+. ....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 4577888999999998874433211 01237999999999986
No 94
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=20.86 E-value=1.4e+02 Score=19.86 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=15.0
Q ss_pred EEEECCCCCCHHHHHHHHHHh
Q 024880 239 FEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 239 ~~V~~P~~l~~~~~~~l~~~l 259 (261)
++|.+.+..|++||+.|-+.+
T Consensus 4 i~i~~~~Grs~EqK~~L~~~i 24 (60)
T PRK02289 4 VRIDLFEGRSQEQKNALAREV 24 (60)
T ss_pred EEEEECCCCCHHHHHHHHHHH
Confidence 355555567999999887654
No 95
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold. It is found at the N terminus of many but not all myosins. The function of this domain is unknown.; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 2EC6_A 2W4H_M 1O1E_P 1O1D_D 1O18_A 1O1C_P 1O1B_D 1O1F_A 2W4A_M 2W4G_M ....
Probab=20.79 E-value=1.3e+02 Score=18.70 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=21.4
Q ss_pred ccceEEEEEecHHHHhCCCeEEEeccCCcEEEEE
Q 024880 172 SNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIA 205 (261)
Q Consensus 172 G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~ 205 (261)
.++-+....|. ...|..+.|.+.||+++.|+
T Consensus 9 ~~egfv~g~I~---~~~g~~vtV~~~~G~~~tv~ 39 (42)
T PF02736_consen 9 PKEGFVKGEII---EEEGDKVTVKTEDGKEVTVK 39 (42)
T ss_dssp SSSSEEEEEEE---EEESSEEEEEETTTEEEEEE
T ss_pred CcccEEEEEEE---EEcCCEEEEEECCCCEEEeC
Confidence 34455555554 56778899999998866654
No 96
>COG1470 Predicted membrane protein [Function unknown]
Probab=20.58 E-value=8.2e+02 Score=24.05 Aligned_cols=97 Identities=21% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEE
Q 024880 84 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEK 163 (261)
Q Consensus 84 ~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~ 163 (261)
..+.+++.+|++-+ .|...++-++-..+++---.-.+..+++.+|-|+..-...++|.-+|. .++.+.+.
T Consensus 9 ~~~~~~~~ls~~~~-~~~d~~f~y~g~~i~~~~lr~~e~~~l~~~v~~~~~g~~~v~f~i~~~---------~~~~v~v~ 78 (513)
T COG1470 9 GTILVTVLLSLMSL-KGADVKFLYQGIEIKGLKLRPKESVELQFKVLPGKAGSYSVKFSIEGV---------PYWTVNVY 78 (513)
T ss_pred CcEEEEEEEEehhc-CCccEEEEEeeeEeeeeEcCCCcceEEEEEEecCCCCcEEEEEEECCc---------eeEEEEEE
Confidence 36788899999888 888888777654442210012346678888888833334466666553 23455544
Q ss_pred cCCCccccccceEEEEEecHHHHhCCCeEEEecc
Q 024880 164 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITL 197 (261)
Q Consensus 164 ~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tl 197 (261)
. -.-|..++++.-.+|-.|.+++++-+
T Consensus 79 ~-------~~~l~it~p~~~~~~e~g~~v~~~~~ 105 (513)
T COG1470 79 T-------SEPLQITLPIEAQEAEAGLKVRVPEL 105 (513)
T ss_pred e-------cccEEEeccchhhhhccccEEEEeeh
Confidence 3 23466778888888888988888744
No 97
>PTZ00329 eukaryotic translation initiation factor 1A; Provisional
Probab=20.30 E-value=3.5e+02 Score=22.30 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=37.2
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
++|-+..+.|...||.++...||- .|.+|+.+.|.- .|.. ..+|+++-+ ++++|...|++
T Consensus 40 ~~LGn~~f~V~c~dG~~rLa~I~GKmRK~IWI~~GD~VlVel--~~yd---~~KgdIi~R--------y~~devr~Lk~ 105 (155)
T PTZ00329 40 RMLGNGRLEAYCFDGVKRLCHIRGKMRKRVWINIGDIILVSL--RDFQ---DSKADVILK--------YTPDEARALKQ 105 (155)
T ss_pred EEcCCCEEEEEECCCCEEEEEeeccceeeEEecCCCEEEEec--cCCC---CCEEEEEEE--------cCHHHHHHHHH
Confidence 344455677777788777777764 577888888842 3332 245665543 56666666654
Done!