Query 024880
Match_columns 261
No_of_seqs 225 out of 1901
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:01:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024880.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024880hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q2g_A HSP40 protein, heat sho 100.0 2.9E-51 9.7E-56 344.7 23.2 178 82-260 2-180 (180)
2 3agx_A DNAJ homolog subfamily 100.0 1.8E-50 6.1E-55 340.0 23.6 179 83-261 2-181 (181)
3 3lz8_A Putative chaperone DNAJ 100.0 1.4E-48 4.6E-53 356.0 22.0 176 80-259 137-314 (329)
4 1c3g_A Heat shock protein 40; 100.0 4.3E-48 1.5E-52 322.5 17.7 169 84-256 1-170 (170)
5 1nlt_A Protein YDJ1, mitochond 100.0 1.7E-47 5.7E-52 336.7 20.8 177 79-256 7-248 (248)
6 3i38_A Putative chaperone DNAJ 100.0 1.7E-28 5.7E-33 189.8 11.5 93 163-259 2-94 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 1.9E-27 6.6E-32 187.2 12.0 93 167-260 1-97 (121)
8 3i38_A Putative chaperone DNAJ 99.3 1.4E-12 4.9E-17 100.2 5.1 81 80-174 8-88 (109)
9 1xao_A YDJ1, mitochondrial pro 99.2 1E-11 3.5E-16 97.2 6.1 84 80-175 3-91 (121)
10 3agx_A DNAJ homolog subfamily 98.9 7.5E-10 2.6E-14 92.3 6.0 81 80-172 89-171 (181)
11 1c3g_A Heat shock protein 40; 98.9 6.7E-10 2.3E-14 91.7 5.5 81 80-172 83-165 (170)
12 2q2g_A HSP40 protein, heat sho 98.9 1E-09 3.6E-14 91.4 6.1 81 80-172 89-171 (180)
13 1nlt_A Protein YDJ1, mitochond 98.9 1.6E-09 5.6E-14 94.6 5.9 83 80-174 158-245 (248)
14 3lz8_A Putative chaperone DNAJ 98.8 4.1E-09 1.4E-13 95.6 5.1 81 80-174 228-308 (329)
15 2ctt_A DNAJ homolog subfamily 96.1 0.00018 6.1E-09 54.1 -4.0 31 83-113 1-31 (104)
16 1msz_A DNA-binding protein smu 31.0 25 0.00085 25.0 2.0 20 240-259 35-54 (86)
17 2dgy_A MGC11102 protein; EIF-1 26.9 1.7E+02 0.0059 21.5 6.2 61 185-257 23-89 (111)
18 3zxf_A Galectin-7; sugar bindi 25.0 1.1E+02 0.0037 23.1 5.0 44 203-246 9-60 (138)
19 2pn2_A Uncharacterized protein 22.0 86 0.0029 24.1 3.9 25 235-259 107-131 (155)
20 2wkk_A Galectin-2; sugar-bindi 20.7 1.8E+02 0.0061 22.4 5.5 43 203-245 10-58 (150)
21 3m20_A 4-oxalocrotonate tautom 20.6 1.1E+02 0.0036 19.4 3.6 20 239-259 3-22 (62)
22 2ns6_A Mobilization protein A; 20.6 94 0.0032 25.0 4.0 24 232-255 67-90 (185)
No 1
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-51 Score=344.66 Aligned_cols=178 Identities=39% Similarity=0.738 Sum_probs=167.7
Q ss_pred CCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCC-CCCCCCccEEEEE
Q 024880 82 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVI 160 (261)
Q Consensus 82 kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDl~v~i 160 (261)
+++|++++|+|||||||+||++++++.+.+.|++| ++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||+|+|
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i 80 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII 80 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence 37899999999999999999999999999999775 677889999999999999999999999999 6778999999999
Q ss_pred EEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEE
Q 024880 161 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE 240 (261)
Q Consensus 161 ~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~ 240 (261)
++++|+.|+|+|+||+++++|+|++|+||++++|+||||+.++|++|++++||+++||+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998766567899999999
Q ss_pred EECCCCCCHHHHHHHHHHhC
Q 024880 241 VKFPTKLTPEQRAGLKRALG 260 (261)
Q Consensus 241 V~~P~~l~~~~~~~l~~~l~ 260 (261)
|+||++||++|+++|+++||
T Consensus 161 V~~P~~Ls~~q~~~l~~~~p 180 (180)
T 2q2g_A 161 ICFPKSLTPEQKKLIKEALD 180 (180)
T ss_dssp EECCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHhcC
Confidence 99999999999999999986
No 2
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.8e-50 Score=340.02 Aligned_cols=179 Identities=48% Similarity=0.881 Sum_probs=165.0
Q ss_pred CCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCC-ceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEE
Q 024880 83 PPPVESKLPCSLEELYSGSTRKMKISRTVVDANG-RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVID 161 (261)
Q Consensus 83 g~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G-~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~ 161 (261)
++|++++|+|||||||+|+++++.+.+.+....| .++.+.++++|+|||||++|++|+|+|+|++.+++.+|||+|+|+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~ 81 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK 81 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEE
Confidence 4689999999999999999999999988774444 267788999999999999999999999999988889999999999
Q ss_pred EEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEE
Q 024880 162 EKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEV 241 (261)
Q Consensus 162 ~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V 241 (261)
+++|+.|+|+|+||+++++|+|++|++|++++|+||||+++.|++|++++||+++||+|+|||..++++.+|||||+|+|
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V 161 (181)
T 3agx_A 82 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEV 161 (181)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEE
T ss_pred EeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence 99999999999999999999999999999999999999889999999999999999999999987655678999999999
Q ss_pred ECCCCCCHHHHHHHHHHhCC
Q 024880 242 KFPTKLTPEQRAGLKRALGG 261 (261)
Q Consensus 242 ~~P~~l~~~~~~~l~~~l~~ 261 (261)
+||++||++|+++|+++||.
T Consensus 162 ~~P~~ls~~q~~~l~~~~~~ 181 (181)
T 3agx_A 162 IFPERIPQTSRTVLEQVLPI 181 (181)
T ss_dssp ECCSCCCHHHHHHHHHHSCC
T ss_pred ECCCCCCHHHHHHHHHhccC
Confidence 99999999999999999974
No 3
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.4e-48 Score=356.01 Aligned_cols=176 Identities=23% Similarity=0.303 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecc-cEEEEEEeCCCCCCCceEEeCCCCCCCC-CCCCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~-~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDl~ 157 (261)
+++++|++++|+|||||||+||+++|.+++.++|+.|+++.+ .++++|+|||||++|++|+|+|+|++.+ ++.+|||+
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~ 216 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLW 216 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEE
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEE
Confidence 567999999999999999999999999999999988875443 7899999999999999999999999875 46899999
Q ss_pred EEEEEEcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEE
Q 024880 158 FVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRI 237 (261)
Q Consensus 158 v~i~~~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I 237 (261)
|+|++++|+.|+|+|+||+++++|+|++|+||++++|+||||+ ++|+||++++||+++||+|+|||.. ..+|||||
T Consensus 217 v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v 292 (329)
T 3lz8_A 217 LVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFA 292 (329)
T ss_dssp EEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEE
T ss_pred EEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEE
Confidence 9999999999999999999999999999999999999999998 7999999999999999999999975 36899999
Q ss_pred EEEEECCCCCCHHHHHHHHHHh
Q 024880 238 KFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 238 ~~~V~~P~~l~~~~~~~l~~~l 259 (261)
+|+|+||++||++|+++|+++.
T Consensus 293 ~~~V~~P~~l~~~q~~~l~~~~ 314 (329)
T 3lz8_A 293 VIKIVMPTKPDEKARELWQQLA 314 (329)
T ss_dssp EEEECCCSSCCHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999999999875
No 4
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=4.3e-48 Score=322.52 Aligned_cols=169 Identities=37% Similarity=0.690 Sum_probs=157.6
Q ss_pred CCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCC-CCCCCCccEEEEEEE
Q 024880 84 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVIDE 162 (261)
Q Consensus 84 ~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDl~v~i~~ 162 (261)
+|++++|+|||||||+||++++++.|. +++|+. +.++++|+|||||++|++|+|+|+|++ .+++.+|||+|+|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--GPHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--ETTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--cCCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 489999999999999999999999987 345644 789999999999999999999999995 567789999999999
Q ss_pred EcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEE
Q 024880 163 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 242 (261)
Q Consensus 163 ~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~ 242 (261)
++|+.|+|+|+||+++++|+|++|+||++++|+||||+++.|++|++++||+++||+|+|||..++++.+|||||+|+|+
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999876556789999999999
Q ss_pred CCCCCCHHHHHHHH
Q 024880 243 FPTKLTPEQRAGLK 256 (261)
Q Consensus 243 ~P~~l~~~~~~~l~ 256 (261)
||++||++|+++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999999874
No 5
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.7e-47 Score=336.69 Aligned_cols=177 Identities=33% Similarity=0.637 Sum_probs=152.5
Q ss_pred CCCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEc----CCC----------------c---------------------
Q 024880 79 VPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVD----ANG----------------R--------------------- 117 (261)
Q Consensus 79 ~~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~----g~G----------------~--------------------- 117 (261)
++++++|++++|+|||||||+|++++|++.+.+.| |+| .
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 35689999999999999999999999999998764 222 0
Q ss_pred --------------------eecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEEEEEEcCCCccccccceEE
Q 024880 118 --------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIV 177 (261)
Q Consensus 118 --------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~i~~~~h~~f~R~G~DL~~ 177 (261)
++.+.++++|+|||||++|++|+|+|+|++.+++++|||||+|++++|+.|+|+|+|||+
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~ 166 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY 166 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEE
Confidence 345678999999999999999999999999888899999999999999999999999999
Q ss_pred EEEecHHHHhCCCeEEEeccCCcEEEEEeCCC--CCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCC--CCHHHHH
Q 024880 178 NHKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK--LTPEQRA 253 (261)
Q Consensus 178 ~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~--~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~--l~~~~~~ 253 (261)
+++|+|+|||+|++++|+||||+.+.|+||++ ++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|++
T Consensus 167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC----------
T ss_pred EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHH
Confidence 99999999999999999999998899999976 99999999999999987654 6899999999999999 9999999
Q ss_pred HHH
Q 024880 254 GLK 256 (261)
Q Consensus 254 ~l~ 256 (261)
+|+
T Consensus 246 ~l~ 248 (248)
T 1nlt_A 246 KLE 248 (248)
T ss_dssp ---
T ss_pred hhC
Confidence 885
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=1.7e-28 Score=189.83 Aligned_cols=93 Identities=23% Similarity=0.290 Sum_probs=87.5
Q ss_pred EcCCCccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEE
Q 024880 163 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 242 (261)
Q Consensus 163 ~~h~~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~ 242 (261)
++|+.|+|+|+||+++++|+|.+|++|++++|+|+||+ +.|+||++++||+++||+|+|||. . +.+|||||+|+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence 68999999999999999999999999999999999996 999999999999999999999998 3 3689999999999
Q ss_pred CCCCCCHHHHHHHHHHh
Q 024880 243 FPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 243 ~P~~l~~~~~~~l~~~l 259 (261)
||++||++|+++|++++
T Consensus 78 ~P~~Ls~~q~~~l~~l~ 94 (109)
T 3i38_A 78 MPTKPDEKARELWQQLA 94 (109)
T ss_dssp CCSSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999999999986
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.9e-27 Score=187.21 Aligned_cols=93 Identities=33% Similarity=0.579 Sum_probs=84.4
Q ss_pred CccccccceEEEEEecHHHHhCCCeEEEeccCCcEEEEEeCCC--CCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECC
Q 024880 167 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 244 (261)
Q Consensus 167 ~f~R~G~DL~~~~~I~l~~Al~G~~~~i~tldG~~l~v~i~~~--~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P 244 (261)
.|+|+|+||+++++|+|++|+||++++|+||||+++.|+||++ ++||+++||+|+|||..+++ .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999999899999977 99999999999999987654 78999999999999
Q ss_pred CC--CCHHHHHHHHHHhC
Q 024880 245 TK--LTPEQRAGLKRALG 260 (261)
Q Consensus 245 ~~--l~~~~~~~l~~~l~ 260 (261)
++ |+++|+++|+++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~ 97 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILP 97 (121)
T ss_dssp CTTCSCHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHcc
Confidence 99 99999999999986
No 8
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.31 E-value=1.4e-12 Score=100.23 Aligned_cols=81 Identities=19% Similarity=0.171 Sum_probs=68.2
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
.|++.|++++++|||.||+.|++++|... .| .++|+||+|+++|++++++|+|.+..+ .+|||+|+
T Consensus 8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~ 73 (109)
T 3i38_A 8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAV 73 (109)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEE
T ss_pred EEECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEE
Confidence 46789999999999999999999887764 33 589999999999999999999998644 78999999
Q ss_pred EEEEcCCCccccccc
Q 024880 160 IDEKPHDVYKRDSND 174 (261)
Q Consensus 160 i~~~~h~~f~R~G~D 174 (261)
+++.-......+..+
T Consensus 74 ~~V~~P~~Ls~~q~~ 88 (109)
T 3i38_A 74 IKIVMPTKPDEKARE 88 (109)
T ss_dssp EEECCCSSCCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 999876665544433
No 9
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1e-11 Score=97.21 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCC--CCCCceEEeCCCCCCCCCC-CCccE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADL 156 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDl 156 (261)
.|++.|++++++|||.||++|++++|... .| ++++|+||+| +++|++++++|+|.+.... .+|||
T Consensus 3 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL 70 (121)
T 1xao_A 3 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL 70 (121)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECTTSCCCTTCEEEETTCSCC------CCCE
T ss_pred eEECCeEEEEEEcCHHHHhCCCEEEEecC------CC------CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCE
Confidence 35789999999999999999999888654 34 4789999999 9999999999999985433 68999
Q ss_pred EEEEEEEcCCC--ccccccce
Q 024880 157 VFVIDEKPHDV--YKRDSNDL 175 (261)
Q Consensus 157 ~v~i~~~~h~~--f~R~G~DL 175 (261)
+|++++.-+.. +..+..++
T Consensus 71 ~V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 71 IIKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp EEEEEEECCCTTCSCHHHHHH
T ss_pred EEEEEEECCCCCCCCHHHHHH
Confidence 99999997665 55544433
No 10
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.95 E-value=7.5e-10 Score=92.34 Aligned_cols=81 Identities=20% Similarity=0.239 Sum_probs=67.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC--CCCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDl~ 157 (261)
.|++.|++++++|||.||+.|+++++... +| +.++|.||+++++|++++++|+|.+... ..+|||+
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (181)
T 3agx_A 89 KRDGSDVIYPARISLREALCGCTVNVPTL------DG------RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI 156 (181)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CC------CEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence 56799999999999999999999888765 34 3789999999999999999999998543 4579999
Q ss_pred EEEEEEcCCCccccc
Q 024880 158 FVIDEKPHDVYKRDS 172 (261)
Q Consensus 158 v~i~~~~h~~f~R~G 172 (261)
|++++.-......+.
T Consensus 157 V~~~V~~P~~ls~~q 171 (181)
T 3agx_A 157 IEFEVIFPERIPQTS 171 (181)
T ss_dssp EEEEEECCSCCCHHH
T ss_pred EEEEEECCCCCCHHH
Confidence 999999766554433
No 11
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.94 E-value=6.7e-10 Score=91.74 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=67.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC--CCCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDl~ 157 (261)
.|++.|++++++|||.||++|+++++... +| ++++|+||+++++|++++++|+|.+... ..+|||+
T Consensus 83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~ 150 (170)
T 1c3g_A 83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI 150 (170)
T ss_dssp EEETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CC------CEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence 46799999999999999999999888765 34 3688999999999999999999998543 3579999
Q ss_pred EEEEEEcCCCccccc
Q 024880 158 FVIDEKPHDVYKRDS 172 (261)
Q Consensus 158 v~i~~~~h~~f~R~G 172 (261)
|++++.-......+.
T Consensus 151 V~~~V~~P~~Ls~~q 165 (170)
T 1c3g_A 151 VKYKVDYPISLNDAQ 165 (170)
T ss_dssp EEECCBCCSSCCTTH
T ss_pred EEEEEECCCCCCHHH
Confidence 999998666555443
No 12
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.93 E-value=1e-09 Score=91.38 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCC--CCCccEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 157 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDl~ 157 (261)
.|++.|++++++|||.||++|+++++... .| +.++|.||+|+++|++++++|+|.+... ..+|||+
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (180)
T 2q2g_A 89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DN------RNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI 156 (180)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TC------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CC------CEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence 57899999999999999999998887765 34 3789999999999999999999998542 3579999
Q ss_pred EEEEEEcCCCccccc
Q 024880 158 FVIDEKPHDVYKRDS 172 (261)
Q Consensus 158 v~i~~~~h~~f~R~G 172 (261)
|++++.-......+.
T Consensus 157 V~~~V~~P~~Ls~~q 171 (180)
T 2q2g_A 157 LEFDICFPKSLTPEQ 171 (180)
T ss_dssp EEEEEECCSCCCHHH
T ss_pred EEEEEECCCCCCHHH
Confidence 999999666554433
No 13
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.88 E-value=1.6e-09 Score=94.61 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCC--CCCCceEEeCCCCCCCCCC-CCccE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADL 156 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDl 156 (261)
.|++.||+++++|||.||+.|++++|... +| +.++|+|||| +++|++++++|+|.+.... ..|||
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL 225 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL 225 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CC------CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence 47799999999999999999998888765 34 3689999999 9999999999999985433 57999
Q ss_pred EEEEEEEcCCC--ccccccc
Q 024880 157 VFVIDEKPHDV--YKRDSND 174 (261)
Q Consensus 157 ~v~i~~~~h~~--f~R~G~D 174 (261)
||+|++.-... +..+..+
T Consensus 226 ~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 226 IIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEEECCC----------
T ss_pred EEEEEEECCCCCCCCHHHHH
Confidence 99999996654 5544433
No 14
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.78 E-value=4.1e-09 Score=95.64 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=67.4
Q ss_pred CCCCCCeEEEEecChhhhhcCcEEEEEEEEEEEcCCCceecccEEEEEEeCCCCCCCceEEeCCCCCCCCCCCCccEEEE
Q 024880 80 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 159 (261)
Q Consensus 80 ~~kg~di~~~l~lsLee~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDl~v~ 159 (261)
.|++.||+++++|||.||++|++++|... .| .++|+||+|+++|++++++|+|.+.. ...|||+|+
T Consensus 228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG-------~v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~ 293 (329)
T 3lz8_A 228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV 293 (329)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred EEcCCcEEEEEECCHHHHcCCCeEEEECC------CC-------CEEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence 46799999999999999999999888766 34 36899999999999999999999755 468999999
Q ss_pred EEEEcCCCccccccc
Q 024880 160 IDEKPHDVYKRDSND 174 (261)
Q Consensus 160 i~~~~h~~f~R~G~D 174 (261)
++|.-......+...
T Consensus 294 ~~V~~P~~l~~~q~~ 308 (329)
T 3lz8_A 294 IKIVMPTKPDEKARE 308 (329)
T ss_dssp EEECCCSSCCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 999866655443333
No 15
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.11 E-value=0.00018 Score=54.08 Aligned_cols=31 Identities=6% Similarity=0.082 Sum_probs=28.2
Q ss_pred CCCeEEEEecChhhhhcCcEEEEEEEEEEEc
Q 024880 83 PPPVESKLPCSLEELYSGSTRKMKISRTVVD 113 (261)
Q Consensus 83 g~di~~~l~lsLee~~~G~~k~i~~~r~~~~ 113 (261)
+.|++++|+|||||||+|++++|.+.+.+.|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C 31 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTC 31 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeEC
Confidence 3578899999999999999999999999885
No 16
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=31.03 E-value=25 Score=25.01 Aligned_cols=20 Identities=20% Similarity=0.503 Sum_probs=17.3
Q ss_pred EEECCCCCCHHHHHHHHHHh
Q 024880 240 EVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 240 ~V~~P~~l~~~~~~~l~~~l 259 (261)
.+.||..|++.||.++-++.
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA 54 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIA 54 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHH
Confidence 67899999999999987764
No 17
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.89 E-value=1.7e+02 Score=21.50 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=36.7
Q ss_pred HHhCCCeEEEeccCCcEEEEEeCC------CCCCCcEEEEcCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q 024880 185 EALGGTSVSLITLDGRDLNIAVTD------IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 257 (261)
Q Consensus 185 ~Al~G~~~~i~tldG~~l~v~i~~------~~~pg~~~~i~g~GmP~~~~~~~~GDL~I~~~V~~P~~l~~~~~~~l~~ 257 (261)
+++-+..+.|...||.++...||. .|.+|+.+.|.=. |.. ...+|+++-+ ++++|...|++
T Consensus 23 ~~lgn~~f~V~l~nG~~~la~i~GK~Rk~IwI~~GD~VlVe~~--~yd--~~~kg~Iv~r--------~~~~qvk~L~k 89 (111)
T 2dgy_A 23 RTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVDPI--EEG--EKVKAEISFV--------LCKDHVRSLQK 89 (111)
T ss_dssp ECCSSSEEEEECTTSCEEEEECCTTCCSCCCCCSSCEEEEEEC--SSC--SSCCEEEEEE--------CCHHHHHHHHH
T ss_pred EeCCCCEEEEEeCCCCEEEEEechhhcccEEEcCCCEEEEEec--ccC--CcceEEEEEE--------eCHHHHHHHHH
Confidence 455556678888888888888874 4667777776521 211 0235555443 44666666654
No 18
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=25.02 E-value=1.1e+02 Score=23.12 Aligned_cols=44 Identities=25% Similarity=0.331 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCcEEEEcCCCCCCCCC--------CCCCCCEEEEEEEECCCC
Q 024880 203 NIAVTDIISPGFELGIPGEGMPIARE--------PGNRGDLRIKFEVKFPTK 246 (261)
Q Consensus 203 ~v~i~~~~~pg~~~~i~g~GmP~~~~--------~~~~GDL~I~~~V~~P~~ 246 (261)
.-.||.++++|+.++|.|.=.+..+. .....|+.++|++.|.++
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~~ 60 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTS 60 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCCC
Confidence 44678899999999999874332211 113569999999999753
No 19
>2pn2_A Uncharacterized protein; putative osmotic stress induced and detoxification response structural genomics; 1.95A {Psychrobacter arcticus} SCOP: d.227.1.1
Probab=21.97 E-value=86 Score=24.14 Aligned_cols=25 Identities=8% Similarity=0.191 Sum_probs=20.5
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHh
Q 024880 235 LRIKFEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 235 L~I~~~V~~P~~l~~~~~~~l~~~l 259 (261)
.-|+++|.+|..+++++++.|.+..
T Consensus 107 ~~i~l~v~l~g~~~~e~~~~l~~~a 131 (155)
T 2pn2_A 107 SEVHIAITFNQELDDKTQKIFYNTA 131 (155)
T ss_dssp EEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHh
Confidence 4688889999889999988887653
No 20
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=20.67 E-value=1.8e+02 Score=22.35 Aligned_cols=43 Identities=5% Similarity=0.098 Sum_probs=29.1
Q ss_pred EEEeCCCCCCCcEEEEcCCCCCC-CCC-----CCCCCCEEEEEEEECCC
Q 024880 203 NIAVTDIISPGFELGIPGEGMPI-ARE-----PGNRGDLRIKFEVKFPT 245 (261)
Q Consensus 203 ~v~i~~~~~pg~~~~i~g~GmP~-~~~-----~~~~GDL~I~~~V~~P~ 245 (261)
.+.+|.+.++|+.++|.|.=.+. .+. -....|+.++|++.|.+
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 55677889999999999852221 111 01124899999999974
No 21
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=20.60 E-value=1.1e+02 Score=19.40 Aligned_cols=20 Identities=20% Similarity=0.119 Sum_probs=13.6
Q ss_pred EEEECCCCCCHHHHHHHHHHh
Q 024880 239 FEVKFPTKLTPEQRAGLKRAL 259 (261)
Q Consensus 239 ~~V~~P~~l~~~~~~~l~~~l 259 (261)
++|.+ ...|++||+.|-+.+
T Consensus 3 I~I~~-~grt~eqK~~L~~~i 22 (62)
T 3m20_A 3 LIVYG-PKLDVGKKREFVERL 22 (62)
T ss_dssp EEEEC-SCCCHHHHHHHHHHH
T ss_pred EEEEE-CCCCHHHHHHHHHHH
Confidence 34555 568999988876644
No 22
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=20.58 E-value=94 Score=24.99 Aligned_cols=24 Identities=33% Similarity=0.499 Sum_probs=19.7
Q ss_pred CCCEEEEEEEECCCCCCHHHHHHH
Q 024880 232 RGDLRIKFEVKFPTKLTPEQRAGL 255 (261)
Q Consensus 232 ~GDL~I~~~V~~P~~l~~~~~~~l 255 (261)
.+-|.=+|.|.+|..||.+|+..|
T Consensus 67 na~lare~~iALP~EL~~eq~~~L 90 (185)
T 2ns6_A 67 NGRLFKEVEFALPVELTLDQQKAL 90 (185)
T ss_dssp TSCCEEEEEEECCTTSCHHHHHHH
T ss_pred CCeEEEEEEEECCccCCHHHHHHH
Confidence 477899999999999998765444
Done!