BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024881
(261 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555887|ref|XP_002518979.1| ATP binding protein, putative [Ricinus communis]
gi|223541966|gb|EEF43512.1| ATP binding protein, putative [Ricinus communis]
Length = 382
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 176/222 (79%), Gaps = 11/222 (4%)
Query: 38 IFKPIFISSSLH-------KSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEI 90
I KP+F S S KS NV K ++R +C ++ ++ ++ YEFSDGS+E+
Sbjct: 32 ISKPVFTSISKFCLPISSFKSYNVSASKEYNRLSCSCFSTATT----STNYEFSDGSSEV 87
Query: 91 ELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDE 150
ELRL LGS + +S KDIFVDADGT L VRV RSGSF TLI+TN LFDKIKP ETIWYID+
Sbjct: 88 ELRLPLGSQDYESGKDIFVDADGTSLIVRVKRSGSFTTLIQTNYLFDKIKPAETIWYIDD 147
Query: 151 DQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGL 210
DQLVINLKKQDPELKWPDIVESWESLTAG+MQLLKGTSI++VGDSTE+N+KVA ELA GL
Sbjct: 148 DQLVINLKKQDPELKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINQKVARELAGGL 207
Query: 211 GYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
GYTPL T+ELLET+ KQTIDSW+LAEGSDSV E +LESL
Sbjct: 208 GYTPLDTQELLETYTKQTIDSWVLAEGSDSVAEAESAILESL 249
>gi|224071393|ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
gi|222840870|gb|EEE78417.1| shikimate kinase-like protein [Populus trichocarpa]
Length = 384
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/239 (66%), Positives = 184/239 (76%), Gaps = 13/239 (5%)
Query: 15 SISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVV-PIKTHDRRRFTCSNSLSS 73
S+S P S S+T S S+SI KS N P+ + RF+C N +S+
Sbjct: 25 SLSNIPFSISKTNFTSVANFSLSI--------PASKSNNASSPLNRY--SRFSC-NCIST 73
Query: 74 IPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETN 133
NT+ YEFSD S+E+ELRL L L+IQSS+DIFVDADGT L V+V SGS ITLIETN
Sbjct: 74 ATPNTN-YEFSDSSSEVELRLSLVGLDIQSSRDIFVDADGTSLVVQVQHSGSHITLIETN 132
Query: 134 QLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVG 193
++F+KIKP ETIW+ID+DQLVIN+KKQDP+LKWPDIVESWESLTAGSMQLLKG SIFLVG
Sbjct: 133 KMFEKIKPAETIWFIDDDQLVINMKKQDPDLKWPDIVESWESLTAGSMQLLKGASIFLVG 192
Query: 194 DSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
DSTE+N+KVA ELAVGLGYT L T+ELLETFAKQTIDSW+LAEGSDSV EC +LESL
Sbjct: 193 DSTEINQKVARELAVGLGYTLLDTQELLETFAKQTIDSWVLAEGSDSVAEAECAILESL 251
>gi|449465896|ref|XP_004150663.1| PREDICTED: uncharacterized protein LOC101203272 [Cucumis sativus]
gi|449517683|ref|XP_004165874.1| PREDICTED: uncharacterized LOC101203272 [Cucumis sativus]
Length = 384
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 171/209 (81%)
Query: 44 ISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQS 103
IS++L ++ P T RFT + S S+ P T YEF+D S+E+ELRLQLG+ +I+S
Sbjct: 40 ISTALTSCFSLSPSNTRFSSRFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRS 99
Query: 104 SKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPE 163
SKD++VDA+ T LT+RV R GS ITL+ET QLF+KIKP ETIWYIDEDQLVINLKK DP+
Sbjct: 100 SKDVYVDANDTSLTIRVQRPGSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPD 159
Query: 164 LKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223
LKWPDIVESWESLTAG QLLKGTSIFL+GDST++N+KVA ELAVGLGYTPLSTKELLET
Sbjct: 160 LKWPDIVESWESLTAGFAQLLKGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLET 219
Query: 224 FAKQTIDSWMLAEGSDSVVNGECDVLESL 252
+KQTIDSWMLAEGSD+V E V+ESL
Sbjct: 220 LSKQTIDSWMLAEGSDAVAQVENTVIESL 248
>gi|225427143|ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
gi|297742063|emb|CBI33850.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 187/246 (76%), Gaps = 19/246 (7%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIF-KPIFISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H SSP+ ++++F P FIS++ RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSSPKPTLTLFTPPPFISNNA-------------TRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISVNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N+L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDSW+ A+GS+SV E
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADGSESVAEAES 229
Query: 247 DVLESL 252
VLE+L
Sbjct: 230 AVLENL 235
>gi|388490874|gb|AFK33503.1| unknown [Lotus japonicus]
Length = 376
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 158/186 (84%), Gaps = 1/186 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P T+ YEFSDGS+E+ELRL +G L+IQS++DI VDAD + L ++V RSGS
Sbjct: 56 CKCSYTA-PVPTTTYEFSDGSSEMELRLNIGGLDIQSTRDISVDADDSSLAIKVLRSGSP 114
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
+TLIETN LFD+IKP+ETIWYIDEDQLV+N KKQDP+LKWPDI+ESWESL AGS QLL+G
Sbjct: 115 LTLIETNPLFDRIKPSETIWYIDEDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQLLQG 174
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+LVGDSTE+N+KVA ELA+GLGYTPL+TKELLE + KQT+DSW+LAEG DSV E
Sbjct: 175 TSIYLVGDSTEINQKVAQELAIGLGYTPLNTKELLEAYTKQTVDSWLLAEGPDSVAEAES 234
Query: 247 DVLESL 252
VLES+
Sbjct: 235 SVLESM 240
>gi|356497645|ref|XP_003517670.1| PREDICTED: uncharacterized protein LOC100816906 [Glycine max]
Length = 369
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 163/199 (81%), Gaps = 4/199 (2%)
Query: 55 VPIKTHDR-RRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADG 113
+P K + R R CS S+ P +T+ YEFSDGS+E+ELRL +G L+++SS+DI VD +
Sbjct: 37 LPQKHYLRLRPCKCS---STAPVSTTTYEFSDGSSEVELRLNIGGLDVRSSRDILVDTND 93
Query: 114 TCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESW 173
T L +RV R GS ITLIETN LFD++K +ETIWYID+DQLV+N KKQDP+LKWPDI+ESW
Sbjct: 94 TSLAIRVLRPGSPITLIETNPLFDRVKSSETIWYIDDDQLVVNFKKQDPDLKWPDIMESW 153
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
ESLTAGS QLL+GTSI+LVGDSTE+N+KVA ELA GLGYTPLSTKELLE + KQT+DSW+
Sbjct: 154 ESLTAGSPQLLQGTSIYLVGDSTEINQKVAQELATGLGYTPLSTKELLELYTKQTVDSWL 213
Query: 234 LAEGSDSVVNGECDVLESL 252
LAEGSDSV E VLES+
Sbjct: 214 LAEGSDSVAEAESAVLESI 232
>gi|357485087|ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula]
gi|355514166|gb|AES95789.1| Shikimate kinase-like protein [Medicago truncatula]
Length = 377
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+LVGDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE
Sbjct: 176 TSIYLVGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEG 235
Query: 247 DVLESL 252
VLES+
Sbjct: 236 TVLESI 241
>gi|388504258|gb|AFK40195.1| unknown [Medicago truncatula]
Length = 377
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+L GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE
Sbjct: 176 TSIYLAGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEG 235
Query: 247 DVLESL 252
VLES+
Sbjct: 236 TVLESI 241
>gi|217072810|gb|ACJ84765.1| unknown [Medicago truncatula]
Length = 240
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+L GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAE SDSV GE
Sbjct: 176 TSIYLAGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAESSDSVAEGEG 235
Query: 247 DVLES 251
VLE+
Sbjct: 236 TVLEA 240
>gi|147767344|emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 170/225 (75%), Gaps = 19/225 (8%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIF-KPIFISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H S P+ ++++F P FIS++ RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSXPKPTLTLFTPPPFISNNA-------------TRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISLNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINXLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDS 231
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDS
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDS 214
>gi|18403860|ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana]
gi|75100603|sp|O82290.2|SKL2_ARATH RecName: Full=Probable inactive shikimate kinase like 2,
chloroplastic; Short=AtSKL2; Flags: Precursor
gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|18377827|gb|AAL67100.1| At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|20197350|gb|AAC36171.2| expressed protein [Arabidopsis thaliana]
gi|330254020|gb|AEC09114.1| shikimate kinase like 2 [Arabidopsis thaliana]
Length = 387
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/245 (57%), Positives = 177/245 (72%), Gaps = 10/245 (4%)
Query: 3 AAAATYHHLSLSSISQNPISKSET-----QHFSSPRHSVSIFKPIFISSSLHKSTNVVPI 57
AA A+ + +S S NP++ T + SSPR S F + S NV+P
Sbjct: 2 AAFASGLAIIFNSPSLNPVTTQATFLSSNRIRSSPR-VFSGFHSLRRRGFRRFSQNVIPD 60
Query: 58 KTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLT 117
+ + F+C N LS++ +T YEF+DG E+ELRL+L + EI S KDI VDADGT L
Sbjct: 61 RFNS---FSC-NCLSAVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLA 116
Query: 118 VRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLT 177
V+ R+G ITL+ETN LF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDIVESWESLT
Sbjct: 117 VKEKRNGLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLT 176
Query: 178 AGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEG 237
AG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTIDSW+LAEG
Sbjct: 177 AGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEG 236
Query: 238 SDSVV 242
DSV
Sbjct: 237 PDSVA 241
>gi|297823343|ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
gi|297325393|gb|EFH55813.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 172/253 (67%), Gaps = 22/253 (8%)
Query: 1 MAAAAATYHHLSLSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTH 60
MAA A+ S S NP++ T +F PI I SS + ++
Sbjct: 1 MAAFASGLASTIFYSPSLNPLTCQAT-----------LFSPIRIRSSPRVFRGLHSLRRR 49
Query: 61 DRRRFT-----------CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFV 109
RRF+ N LS++ +T YEF+DG E+ELRL+L + E S KDI V
Sbjct: 50 GFRRFSQNVTTDRFKSFSCNCLSAVSTSTIDYEFTDGGKEVELRLRLKTGETLSPKDISV 109
Query: 110 DADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDI 169
DADGT L V+ R+G ITL+ETNQLF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDI
Sbjct: 110 DADGTSLAVKEKRNGLLITLLETNQLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDI 169
Query: 170 VESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTI 229
VESWESLTAG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTI
Sbjct: 170 VESWESLTAGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTI 229
Query: 230 DSWMLAEGSDSVV 242
DSW++AEG DSV
Sbjct: 230 DSWIVAEGPDSVA 242
>gi|115483646|ref|NP_001065493.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|78709051|gb|ABB48026.1| expressed protein [Oryza sativa Japonica Group]
gi|113640025|dbj|BAF27330.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|215692645|dbj|BAG88065.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712379|dbj|BAG94506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185074|gb|EEC67501.1| hypothetical protein OsI_34782 [Oryza sativa Indica Group]
Length = 375
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 135/183 (73%)
Query: 70 SLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITL 129
S+SS A YEF+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TL
Sbjct: 59 SVSSSTAPAKDYEFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTL 118
Query: 130 IETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSI 189
I QLFD+IK +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+
Sbjct: 119 INVKQLFDRIKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISV 178
Query: 190 FLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVL 249
+VGDST++NE VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VL
Sbjct: 179 HIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVL 238
Query: 250 ESL 252
ESL
Sbjct: 239 ESL 241
>gi|357141190|ref|XP_003572125.1| PREDICTED: uncharacterized protein LOC100823385 [Brachypodium
distachyon]
Length = 372
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 152/238 (63%), Gaps = 14/238 (5%)
Query: 24 SETQHFSSP----RHSVS----IFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIP 75
+ T FS P RHS + +P + S L S R R S+S+ P
Sbjct: 6 AATCSFSLPANPGRHSTRAPRLLLRPAYRRSLLAASP-----PPASRLRLRPRTSVSASP 60
Query: 76 ANTSQ-YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQ 134
A + YEF+DG+ E+ELRL +G L I+SS+D+FVD D L +R G+ TL+
Sbjct: 61 AAAERDYEFTDGNGEVELRLDIGKLGIESSRDVFVDVDDMSLLIRAKSDGTLRTLMNVTT 120
Query: 135 LFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGD 194
LFD++K +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGD
Sbjct: 121 LFDRVKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGD 180
Query: 195 STEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
ST++NE VA E+A G+GY P+ T ELLE+ +++ID+W EG DSV EC VLESL
Sbjct: 181 STDINEAVAKEIAEGIGYLPVCTSELLESATQKSIDAWADTEGVDSVAEAECVVLESL 238
>gi|194688246|gb|ACF78207.1| unknown [Zea mays]
gi|414867928|tpg|DAA46485.1| TPA: ATP binding protein [Zea mays]
Length = 384
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESL
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESL 250
>gi|212276119|ref|NP_001130083.1| uncharacterized protein LOC100191176 [Zea mays]
gi|195628578|gb|ACG36119.1| ATP binding protein [Zea mays]
Length = 384
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTFLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESL
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESL 250
>gi|222613330|gb|EEE51462.1| hypothetical protein OsJ_32585 [Oryza sativa Japonica Group]
Length = 275
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 129/171 (75%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESL
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESL 174
>gi|18057165|gb|AAL58188.1|AC027037_10 unknown protein [Oryza sativa Japonica Group]
Length = 336
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 129/171 (75%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESL
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESL 174
>gi|242040065|ref|XP_002467427.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
gi|241921281|gb|EER94425.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
Length = 387
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 129/172 (75%)
Query: 81 YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
YEF+DG+ E+ELRL + L I+S++D+FVD D T L +R G+ TL+ LFD+IK
Sbjct: 82 YEFTDGNGEVELRLDIQKLGIESARDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIK 141
Query: 141 PTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNE 200
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST +NE
Sbjct: 142 SSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTHINE 201
Query: 201 KVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
VA E+A G+GY P+ T ELLE+ +++ID+W+ +EG+DSV E VLESL
Sbjct: 202 AVAKEIAEGIGYLPVCTSELLESATQKSIDTWVASEGADSVAEAESVVLESL 253
>gi|302814728|ref|XP_002989047.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
gi|300143148|gb|EFJ09841.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
Length = 304
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDLSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
T +N VA ELA+ LGY PL +K+L+E K ++D + EG D+V EC V E+L
Sbjct: 122 TLINSAVAKELALALGYVPLESKKLMEQLLKTSLDDYAKLEGPDAVAELECKVFETL 178
>gi|302803929|ref|XP_002983717.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
gi|300148554|gb|EFJ15213.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
Length = 305
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDFSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
T +N VA ELA+ LGY PL +K+L+E K ++D + E D+V EC V E+L
Sbjct: 122 TLINSAVAQELALALGYVPLESKKLMEQLLKTSLDDYAKLEDRDAVAELECKVFETL 178
>gi|223943249|gb|ACN25708.1| unknown [Zea mays]
gi|414867929|tpg|DAA46486.1| TPA: hypothetical protein ZEAMMB73_757972 [Zea mays]
Length = 149
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%)
Query: 64 RFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRS 123
R S+S+ PA + YEF+DG+ E+ELRL + L I SSKD+FVD D T L +R
Sbjct: 62 RLRPRASVSTSPAPSKDYEFTDGNGEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSD 121
Query: 124 GSFITLIETNQLFDKIKPTETIWYI 148
G+ TL+ LFD+IK +ETIW +
Sbjct: 122 GTLRTLMNVQTLFDRIKSSETIWCV 146
>gi|255071735|ref|XP_002499542.1| predicted protein [Micromonas sp. RCC299]
gi|226514804|gb|ACO60800.1| predicted protein [Micromonas sp. RCC299]
Length = 280
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGD+ N VA E+A LGYTPLST +L+E T + + +G +V
Sbjct: 60 LKGVTVTFVGDNESANIAVAQEVAKALGYTPLSTPDLIEKITDSTREQILEEDGEARLVI 119
Query: 244 GECDVLESL 252
E VLE L
Sbjct: 120 AENAVLEQL 128
>gi|303277965|ref|XP_003058276.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460933|gb|EEH58227.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 301
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGDS N+ V LA LGY PLST +L+E QT + ++G +V
Sbjct: 90 LKGVTVTFVGDSEGANDAVGRALASALGYVPLSTPDLVEKITGQTRAEIVESDGEGGLVI 149
Query: 244 GECDVLESL 252
E V E L
Sbjct: 150 AENAVFEQL 158
>gi|348686287|gb|EGZ26102.1| hypothetical protein PHYSODRAFT_285146 [Phytophthora sojae]
Length = 162
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 49 HKSTNVVPIKTHDRR---RFTCSNSL-SSIPANTS----QYEFSDGSAEIELRLQLGSLE 100
HK V I D + R + SL ++ PA + Y ++DG + + L L +
Sbjct: 33 HKKRENVEIHEWDGKAAPRLLKTQSLTAAAPAEVTMTITNYAWADGKKRVSVYLTLPGIG 92
Query: 101 IQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQ 160
QS +D +D T LTV++ L+ +L+D+I +T EDQLV+ L K
Sbjct: 93 AQSEEDTHIDWTATSLTVKIKNYEGKTRLLSVPKLYDEISDVKT--KRKEDQLVLQLVKA 150
Query: 161 DPELKW 166
E W
Sbjct: 151 K-EFSW 155
>gi|301112194|ref|XP_002905176.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095506|gb|EEY53558.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 163
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDK 138
+ Y ++DG + + L+L + + +D +D T LTV++ L+ ++L+D+
Sbjct: 72 TNYAWADGKKRVSMYLKLPGIGAYNEEDTHIDWTATSLTVKIKNYEGKTRLLVMSKLYDE 131
Query: 139 IKPTETIWYIDEDQLVINLKKQDPELKW 166
I +T EDQLV+ L K E W
Sbjct: 132 ISDIKTK--RKEDQLVLQLVKA-KEFSW 156
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLIMFEPLL 259
EG D+ E + L+ I L+
Sbjct: 63 KDEGEDNFRELEANCLKETIKIPSLV 88
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLIMFEPLL 259
EG D+ E + L+ I L+
Sbjct: 63 KDEGEDNFRELEANCLKETIKIPSLV 88
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
++L A M+LL+GTS++LVG V LA L Y L L+E A ++
Sbjct: 26 KALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLIEKMAGCSVAEIF 85
Query: 234 LAEGSDSVVNGECDVLESLIMFE 256
EG +S E VL L+ F+
Sbjct: 86 SEEGEESFRELESQVLHELMPFK 108
>gi|423089795|ref|ZP_17078144.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
gi|357557696|gb|EHJ39227.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
Length = 634
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W LTA +++L+ G I +VG S V ++ +LA
Sbjct: 481 ELKAPIIVNGWNDLTADAIKLMDGKEIGIVGGSNNVPSQIENQLA 525
>gi|255656776|ref|ZP_05402185.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-23m63]
Length = 623
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 162 PELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 469 AELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255101961|ref|ZP_05330938.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-63q42]
gi|255307829|ref|ZP_05352000.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile ATCC 43255]
Length = 623
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 162 PELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 469 AELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|126700407|ref|YP_001089304.1| cell wall binding protein [Clostridium difficile 630]
gi|115251844|emb|CAJ69679.1| Cell wall binding protein [Clostridium difficile 630]
Length = 623
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 162 PELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 469 AELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|423081111|ref|ZP_17069723.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
gi|423085017|ref|ZP_17073475.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357550872|gb|EHJ32677.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357551420|gb|EHJ33210.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
Length = 623
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 162 PELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 469 AELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G+S+FLVG V +LA LGY T E++E+ K TI EG D
Sbjct: 5 LDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEIIESVTKMTIPEIFAEEGEDGFRE 64
Query: 244 GECDVLESLIMFEPLL 259
E +L + ++ +
Sbjct: 65 IETQILAEIASYKKCV 80
>gi|255093771|ref|ZP_05323249.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CIP 107932]
gi|255651301|ref|ZP_05398203.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-37x79]
Length = 614
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 461 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 505
>gi|254976385|ref|ZP_05272857.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-66c26]
gi|255315522|ref|ZP_05357105.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-76w55]
gi|255518185|ref|ZP_05385861.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-97b34]
gi|260684366|ref|YP_003215651.1| S-layer protein [Clostridium difficile CD196]
gi|260688025|ref|YP_003219159.1| S-layer protein [Clostridium difficile R20291]
gi|306521135|ref|ZP_07407482.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-32g58]
gi|384362009|ref|YP_006199861.1| S-layer protein [Clostridium difficile BI1]
gi|260210529|emb|CBA65047.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CD196]
gi|260214042|emb|CBE06195.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile R20291]
Length = 623
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 162 PELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 469 AELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G S+FLVG V LA LGY T L+E A QTI+ +G +
Sbjct: 4 LLQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLIERVAGQTINEIFARQGEERFR 63
Query: 243 NGECDVLESL 252
E VL L
Sbjct: 64 ELETQVLAEL 73
>gi|308805879|ref|XP_003080251.1| unnamed protein product [Ostreococcus tauri]
gi|116058711|emb|CAL54418.1| unnamed protein product [Ostreococcus tauri]
Length = 241
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTID 230
++ ++G S+ +VGD+ N+ VA LA GY +S L+E+ A D
Sbjct: 44 LEAMRGVSVCVVGDNERANDGVARALAKRFGYACVSVPALVESAASAVND 93
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ ++ +KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVHTIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLIMFEPLL 259
EG D+ E + L+ I L+
Sbjct: 63 NDEGEDNFRELEANCLKETIKIPSLV 88
>gi|91079410|ref|XP_967066.1| PREDICTED: similar to NudC domain containing 1 [Tribolium
castaneum]
gi|270003473|gb|EEZ99920.1| hypothetical protein TcasGA2_TC002712 [Tribolium castaneum]
Length = 566
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 132 TNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVES 172
T +L+ +I P T W I+ LV+ L+K + L WP+IVE
Sbjct: 311 TGKLYHQIDPDVTCWTIESSTLVLTLQKCESGLMWPEIVEG 351
>gi|392963742|ref|ZP_10329164.1| Rhizobactin receptor AltName: Full=TonB-dependent siderophore
receptor rhtA [Fibrisoma limi BUZ 3]
gi|387847589|emb|CCH51206.1| Rhizobactin receptor AltName: Full=TonB-dependent siderophore
receptor rhtA [Fibrisoma limi BUZ 3]
Length = 784
Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 15/191 (7%)
Query: 1 MAAAAATYHHLSLSSISQNPISKS------ETQHFS-SPRHSVSIFKPIFISSSLHKST- 52
+AA A TY LS+S + + +S ET + + R S S + +++S T
Sbjct: 62 VAAPAGTYT-LSISGVGYETVRQSVTLRTGETASLNLTARASESSLDEVVVTASRRAETI 120
Query: 53 NVVP--IKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVD 110
N VP I ++R+ +L++ N QY G A R + + + + V
Sbjct: 121 NEVPSAITIVNKRQIAEQTALNADVTNVLQYTVP-GLAPATYRTS-NTGQTLRGRQVLVL 178
Query: 111 ADGTCLTVRVNRSGSFITLIETNQL--FDKIKPTETIWYIDEDQLVINLKKQDPELKWPD 168
DG + + G + LI+ + L + IK +I+ D +IN + PE P
Sbjct: 179 VDGVPQSTPLRNGGRDLRLIDPSALERIEVIKGATSIYGNGADGGIINYITKRPETAKPF 238
Query: 169 IVESWESLTAG 179
++W LT+G
Sbjct: 239 TSQTWAGLTSG 249
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+ L G+S+FLVG V +LA LGY+ T E++E K TI G D
Sbjct: 59 EALDGSSLFLVGMMGTGKSSVGKKLAASLGYSFFDTDEVIEQVTKTTIPEIFAESGEDGF 118
Query: 242 VNGECDVLESLIMFE 256
E VL + ++
Sbjct: 119 REIETQVLAEIAAYK 133
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG ++FL+G V LA LGY T L+E A +TI+ +G ++
Sbjct: 4 LLKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALIEQIAGKTINEIFAEDGEETFR 63
Query: 243 NGECDVLESLIMFEPLL 259
E VL L ++ L+
Sbjct: 64 QLETQVLSQLSAYQQLI 80
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKVIKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLIEKLAKKSINQIF 62
Query: 234 LAEGSDS 240
EG D+
Sbjct: 63 NDEGEDN 69
>gi|410616115|ref|ZP_11327110.1| serine protease [Glaciecola polaris LMG 21857]
gi|410164430|dbj|GAC31248.1| serine protease [Glaciecola polaris LMG 21857]
Length = 378
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 74 IPANTSQYEFS--DGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIE 131
+P+ ++ FS GS + ++ ++LGS+ ++ D +G T ++ SG F ++
Sbjct: 245 VPSGSTNVTFSISGGSGDADMYVKLGSVAQTNNWDCRPYLNGNNETCNMSGSGDFHVMLR 304
Query: 132 TNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFL 191
F + T + +++V++ + +K + W A + + T I L
Sbjct: 305 AYSTFSGVTLTASFNAASSNEIVVDASEYGQMVKSNHKSQMWVKHNANGTKTI--THIRL 362
Query: 192 VGDSTEV 198
+GDS EV
Sbjct: 363 IGDSNEV 369
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFL+G K L+LA L Y + L+E AK++I+ EG +
Sbjct: 13 LKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRE 72
Query: 244 GECDVLESLIMFEPLL 259
E + L+ I L+
Sbjct: 73 LEANCLKETIKIPSLV 88
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G V LA LGY + T L+E A QTI+ G D
Sbjct: 5 LLKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLIEQVAGQTINQIFADRGEDEFR 64
Query: 243 NGECDVL 249
E VL
Sbjct: 65 QLEAQVL 71
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L TS+FL+G V LA LGY L T EL+++ K+T S + AE +S
Sbjct: 5 LADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELIKSVTKKT-PSELFAEAGES--- 60
Query: 244 GECDVLESLIMFE 256
E +ES+I+ E
Sbjct: 61 -EFRAIESMILAE 72
>gi|159898212|ref|YP_001544459.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
[Herpetosiphon aurantiacus DSM 785]
gi|159891251|gb|ABX04331.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding
[Herpetosiphon aurantiacus DSM 785]
Length = 165
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 27/149 (18%)
Query: 69 NSLSSIPANTSQYEFSDGSAEIELRLQLGSL-EIQSSKDI---FVDADGTCLTVRVNRSG 124
NSL S P Q EF DG G + E+ SK + FVD D +
Sbjct: 33 NSLHSRPMVVQQKEF-DGDLWFMTGRDSGKIAELSQSKQVNVAFVDVDDS---------- 81
Query: 125 SFITLIETNQLFD---KIK----PTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLT 177
+++L T Q+ D KIK P W+ DE+ I L K +P+ IVE W++
Sbjct: 82 RYVSLSGTGQIVDDRAKIKELWTPLAKAWFKDENDPNIVLIKVEPQ-----IVEYWDTPN 136
Query: 178 AGSMQLLKGTSIFLVGDSTEVNEKVALEL 206
+ +Q+ S + G+ E+ E ++L
Sbjct: 137 STFVQVAGFLSALVTGERPEIGEHGKVKL 165
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GTS+FL+G V LA +GY L T EL++ K+T + + AE +S
Sbjct: 51 LVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELIQGVTKKT-PAELFAELGES--- 106
Query: 244 GECDVLESLIMFE 256
E +ESLI+ E
Sbjct: 107 -EFRAIESLILAE 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,775,556,137
Number of Sequences: 23463169
Number of extensions: 144383459
Number of successful extensions: 295329
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 295262
Number of HSP's gapped (non-prelim): 82
length of query: 261
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 122
effective length of database: 9,097,814,876
effective search space: 1109933414872
effective search space used: 1109933414872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 75 (33.5 bits)