BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024883
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2
SV=2
Length = 398
Score = 256 bits (655), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 184/263 (69%), Gaps = 16/263 (6%)
Query: 1 MVDAAAVFGMIFGSEYFEDYIGQLALATMASVEV--EEDKQDIEVYKHKIQEKMRAMQKE 58
++D AA+F M+FGSE FE YIGQLA+A+MAS+++ E D+ D + KIQEK+R +QKE
Sbjct: 80 IIDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTK----KIQEKLRIVQKE 135
Query: 59 REEKLITILKNHLEPFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKEL 118
RE+KL ILK+ L +V + DEF+ A AE RLS AA+G ML+TIGYIY R+AAKEL
Sbjct: 136 REDKLAQILKDRLNEYVINK-DEFISNAEAEVARLSNAAYGVDMLNTIGYIYVRQAAKEL 194
Query: 119 GKDKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKA- 177
GK Y+ VPF+AEW R+KGH IKSQ++AA+GA +L Q+QEE+K+ QL N E N +
Sbjct: 195 GKKAIYLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKR--QL-NTEGNYTEEE 251
Query: 178 ----IEAKKDAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIF 233
++A K M+ SLW++NV DIE TL RVCQ VL+DP +E L+ RA+ LK LG IF
Sbjct: 252 LEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKALGRIF 311
Query: 234 QGAKAAYSRENSLRHEDDTKINA 256
Q AK A S + L + + K+N
Sbjct: 312 QRAKTA-SESDPLENSEPQKLNG 333
>sp|O59731|YHXB_SCHPO Uncharacterized J domain-containing protein C3E7.11c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC3E7.11c PE=3 SV=1
Length = 355
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 27/252 (10%)
Query: 3 DAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQ-----DIEVYKHKIQ-EKMRAMQ 56
DA F +FG + F DY+G+L L + E+ + D E K ++Q E+ +
Sbjct: 87 DAFEFFKNLFGGDSFRDYVGELNLLKELCKMINEEPELKAIEDTEESKKQLQREESKEAD 146
Query: 57 KEREEKLITILKNHLEPFV--------DGRADEFVKWANAEARRLSGAAFGEAMLHTIGY 108
+ +E++ + KN L+ D D F + EA L +FG MLH IG
Sbjct: 147 RLLQERIDVLCKNLLDKLSIWTETDMSDRVTDAFKQKMQFEAELLKDESFGNEMLHAIGS 206
Query: 109 IYTRRAAKELGKDKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLE 168
Y +R A L + + ++ + + + KG L+K + VS + +Q L + E
Sbjct: 207 TYVQR-ANILIQSQSFLGIRGVWGSLCAKGTLLKDTWNT---VVSAVDVQSSAAALAKAE 262
Query: 169 NKEENLMKAIEAKKDA-------MLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKL 221
EE K E + +A +L + W+ ++++ + V +L D +V E
Sbjct: 263 EGEEQWSK--EKRDEAARELTGKVLSATWKGTRFEVQSVIRTVSDKILYDKAVPLEKRIN 320
Query: 222 RAKALKKLGTIF 233
RA AL +G +F
Sbjct: 321 RANALLMIGQVF 332
>sp|P40564|DJP1_YEAST DnaJ-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=DJP1 PE=1 SV=1
Length = 432
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 74 FVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFLAEW 133
+ D D F K EA L +FG +LHTIG +Y +A L + + +
Sbjct: 228 YDDACKDSFKKKFEEEANLLKMESFGLDILHTIGDVYYEKAEIFLAS-QNLFGMGGIFHS 286
Query: 134 VRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLM-----KAIEAKKDAM--- 185
++ KG + + S A+ +EL+K+ + E L + I+ + +
Sbjct: 287 MKAKGGVFMDTLRTVSAAIDAQNTMKELEKMKEASTNNEPLFDKDGNEQIKPTTEELAQQ 346
Query: 186 --------LQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQ 234
L + W + +I +TL VC+ VL+D SVSK+TL RA+A+K LG +F+
Sbjct: 347 EQLLMGKVLSAAWHGSKYEITSTLRGVCKKVLEDDSVSKKTLIRRAEAMKLLGEVFK 403
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 3 DAAAVFGMIFGSEYFEDYIGQLAL 26
DAA F +IFG + F YIG+L L
Sbjct: 83 DAAEQFSVIFGGDAFASYIGELML 106
>sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein C4H3.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC4H3.01 PE=1 SV=1
Length = 392
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 63/297 (21%)
Query: 1 MVDAAAVFGMIFGSEYFEDYIGQLA-----------------------LATMASVEVEED 37
DA F +FG F +++G+L+ L +S
Sbjct: 84 FTDAYDFFTNLFGGAPFREWVGELSFVKEMFREEDSAVEQGQMNDKQQLLLESSEPTPTI 143
Query: 38 KQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDG---RADEFVKWANAE----- 89
KQ K Q + R +RE+++I + ++ + R D+++ A E
Sbjct: 144 KQQFNDRKKNAQIREREALAKREQEMIEDRRQRIKEVTENLEKRLDDWIAKATTEEGLNA 203
Query: 90 --------ARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFLAEWVR--DKGH 139
A L +FG +LH IG +YT++ L + K W R +KG
Sbjct: 204 LREKYTQEANTLRIESFGVEILHAIGEVYTQKGRTVL----KSSKFGIGGFWSRMKEKGK 259
Query: 140 LIKS---QVSAASGA-VSLIQIQEELKKLNQLENKEENLMKAIEAKK------DAMLQSL 189
+ ++ VSAA A +S+ Q+Q +LE+K E+ A E K +L++
Sbjct: 260 IARATWDTVSAAMDAKLSIDQMQ-------KLEDKGEDQASAEERAKLELDITGKILRAS 312
Query: 190 WQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQGAKAAYSRENSL 246
W DI+ L C +LK ++ LK RA AL ++GTIF +A N +
Sbjct: 313 WCGARYDIQGVLREACSNLLKKRVPTELRLK-RAHALLEIGTIFSNVEADPDDPNRI 368
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CAJ1 PE=1 SV=1
Length = 391
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 65/289 (22%)
Query: 3 DAAAVFGMIFGSEYFEDYIGQLAL------AT----------MASVEVE--EDKQDIEVY 44
DA+ F IFG + F+D+IG+ +L AT A+ E E ++ D +
Sbjct: 83 DASEYFTAIFGGDGFKDWIGEFSLFKELNEATEMFGKEDEEGTAATETEKADESTDGGMV 142
Query: 45 KHKI---------------QEKMRAMQKEREEK-------------------LITILKNH 70
KH +EK+ M+K+R E LI + N+
Sbjct: 143 KHDTNKAESLKKDKLSKEQREKLMEMEKKRREDMMKQVDELAEKLNEKISRYLIAVKSNN 202
Query: 71 LEPFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFL 130
LE EF + + E L +FG +L+ + +Y +A + K Y + +
Sbjct: 203 LE--------EFTRKLDQEIEDLKLESFGLELLYLLARVYKTKANNFIMSKKTY-GISKI 253
Query: 131 AEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLN--QLENKEENLMKAIEAKKDAMLQS 188
RD +KS + S + + E++ ++N +L+ E ++ A K L
Sbjct: 254 FTGTRDNARSVKSAYNLLSTGLEAQKAMEKMSEVNTDELDQYERAKFESTMAGK--ALGV 311
Query: 189 LWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQGAK 237
+W ++ ++E L VC +L D V + +AKA+ + F A+
Sbjct: 312 MWAMSKFELERKLKDVCNKILNDKKVPSKERIAKAKAMLFIAHKFASAR 360
>sp|P13830|RESA_PLAFF Ring-infected erythrocyte surface antigen OS=Plasmodium falciparum
(isolate FC27 / Papua New Guinea) GN=RESA PE=2 SV=1
Length = 1073
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 26/250 (10%)
Query: 5 AAVFGMIFGSEYFEDYIGQLALATMASVEVEE--DKQDIEVYKHKIQEKMRAMQKEREEK 62
++F ++ E F+D+ G + T+ E+ D+E + + M QKERE
Sbjct: 599 PSIFYLLSSLEKFKDFTGTPQIVTLLRFFFEKRLSMNDLENKSEHLLKFMEQYQKEREAH 658
Query: 63 LITILKNHLEPFVDGRADEFVKWANAEARRLSG---AAFGEAMLHTIGYIYTRRAAKELG 119
+ L N L+P + G + KW +L G + F +L ++ +I+ A L
Sbjct: 659 VSEYLLNILQPCIAGDS----KWNVPIITKLEGLKGSRFDIPILESLRWIFKHVAKTHLK 714
Query: 120 KDKRYMKVPFLAEWVR-DKGHLIKSQVSAASGAVSLIQIQEELKKLN-QLENKEENLMKA 177
K + K L + + +K L + S + E++ + EN N+
Sbjct: 715 KSSKSAKK--LQQRTQANKQELANINNNLMSTLKEYLGSSEQMNSITYNFENINSNVDNG 772
Query: 178 IEAKK-------------DAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAK 224
++K + ++ + I++ DIE T + +L D SV ++TLK RA+
Sbjct: 773 NQSKNISDLSYTDQKEILEKIVSYIVDISLYDIENTALNAAEQLLSDNSVDEKTLKKRAQ 832
Query: 225 ALKKLGTIFQ 234
+LKKL +I +
Sbjct: 833 SLKKLSSIME 842
>sp|P13831|RESA_PLAFN Ring-infected erythrocyte surface antigen (Fragment) OS=Plasmodium
falciparum (isolate NF7 / Ghana) GN=RESA PE=2 SV=1
Length = 760
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 26/250 (10%)
Query: 5 AAVFGMIFGSEYFEDYIGQLALATMASVEVEE--DKQDIEVYKHKIQEKMRAMQKEREEK 62
++F ++ E F+D+ G + T+ E+ D+E + + M QKERE
Sbjct: 385 PSIFYLLSSLEKFKDFTGTPQIVTLLRFFFEKRLSMNDLENKSEHLLKFMEQYQKEREAH 444
Query: 63 LITILKNHLEPFVDGRADEFVKWANAEARRLSG---AAFGEAMLHTIGYIYTRRAAKELG 119
+ L N L+P + G + KW +L G + F +L ++ +I+ A L
Sbjct: 445 VSEYLLNILQPCIAGDS----KWNVPIITKLEGLKGSRFDIPILESLRWIFKHVAKTHLK 500
Query: 120 KDKRYMKVPFLAEWVR-DKGHLIKSQVSAASGAVSLIQIQEELKKLN-QLENKEENLMKA 177
K + K L + + +K L + S + E++ + EN N+
Sbjct: 501 KSSKSAKK--LQQRTQANKQELANINNNLMSTLKEYLGSSEQMNSITYNFENINSNVDNG 558
Query: 178 IEAKK-------------DAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAK 224
++K + ++ + I++ DIE T + +L D SV ++TLK RA+
Sbjct: 559 NQSKNISDLSYTDQKEILEKIVSYIVDISLYDIENTALNAAEQLLSDNSVDEKTLKKRAQ 618
Query: 225 ALKKLGTIFQ 234
+LKKL +I +
Sbjct: 619 SLKKLSSIME 628
>sp|Q26005|RESA_PLAFP Ring-infected erythrocyte surface antigen (Fragment) OS=Plasmodium
falciparum (isolate Palo Alto / Uganda) GN=RESA PE=3
SV=1
Length = 304
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 189 LWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQ 234
+ I++ DIE T + +L D SV ++TLK RA++LKKL +I +
Sbjct: 42 IVDISLYDIENTALNAAEQLLSDNSVDEKTLKKRAQSLKKLSSIME 87
>sp|P21884|YKYA_BACSU Uncharacterized lipoprotein YkyA OS=Bacillus subtilis (strain 168)
GN=ykyA PE=4 SV=3
Length = 223
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 171 EENLMKAIEAKKDAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLG 230
E+N +K +EAK++ + S+ ++N+ D + ++ + L++ S +E LKL ++KK
Sbjct: 52 EQNTLKELEAKENQLYDSVMKLNMDDYKKIVA-LSNKALENVSKREEHLKLENDSMKKSE 110
Query: 231 TIFQGAKAA 239
T F+ AK +
Sbjct: 111 TEFEEAKTS 119
>sp|Q21HU3|GCSP_SACD2 Glycine dehydrogenase [decarboxylating] OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvP PE=3 SV=1
Length = 964
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 67 LKNHLEPFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKE 117
+K+HL PF+ G + V E +S A +G A + TI ++Y R E
Sbjct: 728 VKSHLAPFLAGHPVQPVPNTLVENGTISAAPWGSASILTISWMYIRMMGAE 778
>sp|A7HKV8|TRUA_FERNB tRNA pseudouridine synthase A OS=Fervidobacterium nodosum (strain
ATCC 35602 / DSM 5306 / Rt17-B1) GN=truA PE=3 SV=1
Length = 246
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 29 MASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDGRAD 80
M V +E + + ++IQ +R +Q E E+ L + K H++ + GR D
Sbjct: 1 MRRVAIEFSYDGTDFFGYQIQNNVRTVQGELEKALEKVFKIHIDTYAAGRTD 52
>sp|Q6TMJ3|SIGJ_DICDI SrfA-induced gene J protein OS=Dictyostelium discoideum GN=sigJ
PE=2 SV=1
Length = 357
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 13 GSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLE 72
G++ +DYI + ++ E ++D+E KH + + +KE L N++
Sbjct: 62 GAKTVQDYISSGIESVKHTITTEPAQKDMENLKHNVNHNLEEAEKEGSSVL-----NNIS 116
Query: 73 PFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYT--RRAAKELGKD 121
F G A+E A +EA R+ A+ + +G ++ +R A E KD
Sbjct: 117 NFFKGSAEE----AKSEAERIGYEAYKDGD-QFVGDVHKNFKRTANETQKD 162
>sp|C3NGY7|SYS_SULIN Serine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=serS PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 DKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKAIEA 180
DK++ +V E +R + +++ SQ+ SG +I+E L LE+KE+ L K IE
Sbjct: 37 DKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKKKIEESKNLLKILEDKEKELEK-IEV 95
Query: 181 KKDAMLQSL 189
++D +L SL
Sbjct: 96 ERDRLLSSL 104
>sp|C3MW57|SYS_SULIM Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=serS PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 DKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKAIEA 180
DK++ +V E +R + +++ SQ+ SG +I+E L LE+KE+ L K IE
Sbjct: 37 DKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKKKIEESKNLLKILEDKEKELEK-IEV 95
Query: 181 KKDAMLQSL 189
++D +L SL
Sbjct: 96 ERDRLLSSL 104
>sp|C3MQH9|SYS_SULIL Serine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=serS PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 DKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKAIEA 180
DK++ +V E +R + +++ SQ+ SG +I+E L LE+KE+ L K IE
Sbjct: 37 DKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKKKIEESKNLLKILEDKEKELEK-IEV 95
Query: 181 KKDAMLQSL 189
++D +L SL
Sbjct: 96 ERDRLLSSL 104
>sp|C4KHR4|SYS_SULIK Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=serS PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 DKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKAIEA 180
DK++ +V E +R + +++ SQ+ SG +I+E L LE+KE+ L K IE
Sbjct: 37 DKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKKKIEESKNLLKILEDKEKELEK-IEV 95
Query: 181 KKDAMLQSL 189
++D +L SL
Sbjct: 96 ERDRLLSSL 104
>sp|C3N6A0|SYS_SULIA Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=serS PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 DKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEELKKLNQLENKEENLMKAIEA 180
DK++ +V E +R + +++ SQ+ SG +I+E L LE+KE+ L K IE
Sbjct: 37 DKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKKKIEESKNLLKILEDKEKELEK-IEV 95
Query: 181 KKDAMLQSL 189
++D +L SL
Sbjct: 96 ERDRLLSSL 104
>sp|P38784|VMA22_YEAST Vacuolar ATPase assembly protein VMA22 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VMA22 PE=1 SV=1
Length = 181
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 12 FGSEYF-EDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNH 70
+G +Y+ E YIGQL MA+VE + K +E+ K K Q+K +KE E+ +T K
Sbjct: 60 YGEDYWDETYIGQL----MATVEEKNSKVVVEIVKRKAQDKQE--KKEEEDNKLTQRKKG 113
Query: 71 LEP 73
+P
Sbjct: 114 TKP 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,621,484
Number of Sequences: 539616
Number of extensions: 3194950
Number of successful extensions: 17072
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 16998
Number of HSP's gapped (non-prelim): 155
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)