BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024884
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 38/180 (21%)
Query: 7 KLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLKE 66
+++ I++ +R TF KR+N LLKKA+E + LCD EV ++I+ P + +++
Sbjct: 7 EMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSP-------RSKLYEFSS 59
Query: 67 GQLTSIIRKYKKKISAVDHGQQRTLSLAKFDESKTRQVDDAATMARKKI---CVGDFTTW 123
+ + I +Y+++I + + +R ++Q D + KKI +
Sbjct: 60 SSIAATIERYQRRIKEIGNNHKRN--------DNSQQARDETSGLTKKIEQLEISKRKLL 111
Query: 124 DQGMDSFSEDQLKMILSTMD------------------DKLKAADRKLNMIKGDQNLKNK 165
+G+D+ S ++L+ + + +D +KLKA +R N++K +++LK K
Sbjct: 112 GEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEER--NLVKENKDLKEK 169
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
+KL I +E++R +F KRKN + KK +E +TLC V+ C +IY P + PE W +
Sbjct: 4 VKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIP----VPESWPSR 59
Query: 66 EG 67
EG
Sbjct: 60 EG 61
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 7 KLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLKE 66
+++ I++ +R TF KR+N LLKKA+E + LCD EV +II+ P K
Sbjct: 7 EMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS------S 60
Query: 67 GQLTSIIRKYKKKISAVDHGQQRTLSLAKFDESKTRQVDDAATMARK--KICVGDFTTWD 124
+ + +Y+K+I + +R +++ + D+ +ARK + +
Sbjct: 61 SSIPKTVERYQKRIQDLGSNHKR-------NDNSQQSKDETYGLARKIEHLEISTRKMMG 113
Query: 125 QGMDSFSEDQLKMILSTMDDKL 146
+G+D+ S ++L+ + + +D L
Sbjct: 114 EGLDASSIEELQQLENQLDRSL 135
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------SSRGRLYEYS 74
Query: 66 EGQLTSIIRKYKKKIS 81
+ I +YKK IS
Sbjct: 75 NNSVKGTIERYKKAIS 90
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
+KL I +E++R +F KRK+ + KK +E +TLC V+ C +IY P + PE W +
Sbjct: 4 VKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIP----VPESWPSR 59
Query: 66 EG 67
EG
Sbjct: 60 EG 61
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG
PE=1 SV=2
Length = 252
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------SSRGRLYEYS 74
Query: 66 EGQLTSIIRKYKKKIS 81
+ I +YKK IS
Sbjct: 75 NNSVKGTIERYKKAIS 90
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 6 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------SSRGRLYEYA 58
Query: 66 EGQLTSIIRKYKKKIS-AVDHGQQRTLSLAKFDE--SKTRQVDDAATMARKKICVGD 119
+ S + +YKK S + G ++ + + SK RQ + A + VGD
Sbjct: 59 NNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGD 115
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 6 IEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------STRGRLYEYA 58
Query: 66 EGQLTSIIRKYKKKIS 81
+ S I +YKK S
Sbjct: 59 NNNIRSTIERYKKACS 74
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------STRGRLYEYA 74
Query: 66 EGQLTSIIRKYKKKISAVDHGQQRTLSLAKF---DESKTRQVDDAATMARKKI---CVGD 119
+ I +YKK + + + + A+F + SK RQ + + + +G
Sbjct: 75 NNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGS 134
Query: 120 FTTWD-QGMDSFSEDQLKMILSTMDDKLKAA-----DRKLNMIKGDQNLKNKAASRKLDH 173
T D +G+++ E + I S ++ L A +++++ +Q L+ K A +
Sbjct: 135 LTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQ 194
Query: 174 DHSN 177
H N
Sbjct: 195 QHMN 198
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 7 KLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGP 50
+L+ I++ +R TF KR+N LLKKA+E + LCD EV +I++ P
Sbjct: 7 ELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSP 50
>sp|P38128|SMP1_YEAST Transcription factor SMP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SMP1 PE=1 SV=1
Length = 452
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYG 49
M +++EPIK ++ R TF KRK L KKA+E + LC V++ +II G
Sbjct: 1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILG 49
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 7 KLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGP 50
+L+ I++ +R TF KR+N LLKKA+E + LCD EV +I++ P
Sbjct: 7 ELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSP 50
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV ++I+ S + ++
Sbjct: 21 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIF-------STRGRLYEYA 73
Query: 66 EGQLTSIIRKYKKKIS 81
+ I +YKK S
Sbjct: 74 NNSVRGTIERYKKACS 89
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 7 KLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGP 50
+++ I++ +R TF KR+N LLKKA+E + LCD EV +II+ P
Sbjct: 7 QMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSP 50
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV ++I+ S + ++
Sbjct: 21 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIF-------STRGRLYEYA 73
Query: 66 EGQLTSIIRKYKKKIS 81
+ I +YKK S
Sbjct: 74 NNSVRGTIERYKKACS 89
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+ S + +++
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF-------SNRGKLYEFC 58
Query: 66 EGQ-LTSIIRKYKK 78
GQ +T + +Y+K
Sbjct: 59 SGQSMTRTLERYQK 72
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ +R TF KR+N L+KKA E + LCD EV +II+ K I+
Sbjct: 6 IEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGK-------IYDFS 58
Query: 66 EGQLTSIIRKYKKKISAVDHGQQR 89
+ I+ +Y ++ +H QQR
Sbjct: 59 SVCMEQILSRYGYTTASTEHKQQR 82
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 11 IKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGP 50
I++ +R TF KR+N LLKKA+E + LCD EV +I++ P
Sbjct: 11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSP 50
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------SSRGRLYEYA 74
Query: 66 EGQLTSIIRKYKKKIS 81
+ + I +YKK S
Sbjct: 75 NNSVKATIERYKKACS 90
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV +I++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-------SSRGRLYEYA 74
Query: 66 EGQLTSIIRKYKKKIS 81
+ + I +YKK S
Sbjct: 75 NNSVKATIERYKKACS 90
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ +R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIF 48
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ +R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIF 48
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVK 53
++++ I+++ R TF KRK+ LLKKAYE + LCD EV +II+ G K
Sbjct: 6 VEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGK 53
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
++++ I++ R TF KR+N LLKKAYE + LCD EV ++++ S + ++
Sbjct: 22 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVF-------SNRGRLYEYA 74
Query: 66 EGQLTSIIRKYKKKIS 81
+ + I +YKK S
Sbjct: 75 NNSVKATIERYKKACS 90
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++++ I+++ +R TF KR+N LLKKAYE A LCD E+ +I++
Sbjct: 6 IEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVF 48
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ +R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ +R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q03413|MEF2D_XENLA Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis
GN=mef2d PE=1 SV=1
Length = 498
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + ++++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
L L P +H R ATF+KR + KK +E TLCD++ C +IY P P +W
Sbjct: 7 LVLIPDRH--FRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSP-----FENPTVWPST 59
Query: 66 EGQLTSIIRKYKKK 79
EG + +I ++ +K
Sbjct: 60 EG-VQEVISEFMEK 72
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|O22456|SEP3_ARATH Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3
PE=1 SV=1
Length = 251
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1
SV=1
Length = 521
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + ++++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba
GN=AGL9 PE=2 SV=1
Length = 254
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVKGQSLKPEIWTLK 65
+KL I++ +R TF KRK + KK E TLC VE C ++Y P + PE W +
Sbjct: 5 MKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPF----NSIPEAWPSR 60
Query: 66 EGQLTSIIRKYKKKISAVD 84
EG + ++ K+ ++S +D
Sbjct: 61 EG-VEDVVSKF-MELSVLD 77
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q63943|MEF2D_MOUSE Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1
SV=2
Length = 514
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + ++++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|O89038|MEF2D_RAT Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d
PE=1 SV=1
Length = 507
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + ++++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q5REW7|MEF2A_PONAB Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2
SV=1
Length = 494
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + +++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++++ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|A2ICN5|MEF2A_PIG Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2
SV=2
Length = 507
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + +++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +II+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIF 48
>sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1
SV=2
Length = 498
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + +++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIYGPGVK 53
M + +E I +E+ R ATF KRKN L+KKA E + LCD E+ +I++ K
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNK 55
>sp|Q9W6U8|MEF2A_CHICK Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A
PE=2 SV=1
Length = 499
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + +++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1
SV=1
Length = 507
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MACEALKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
M + +++ I E+ R TF KRK L+KKAYE + LCD E+ +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD EV +I++
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVF 48
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 6 LKLEPIKHEKARLATFKKRKNSLLKKAYEFATLCDVEVCIIIY 48
++L+ I+++ R TF KR+N LLKKAYE + LCD E+ ++I+
Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIF 48
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,541,283
Number of Sequences: 539616
Number of extensions: 3609500
Number of successful extensions: 7683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7512
Number of HSP's gapped (non-prelim): 186
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)