Query 024885
Match_columns 261
No_of_seqs 116 out of 437
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 16:07:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 4.3E-96 1E-100 652.3 24.9 237 6-242 3-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.1E-95 7E-100 650.5 25.6 237 1-237 25-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 3.3E-95 1.1E-99 643.0 22.7 230 6-235 7-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 4.3E-94 1.5E-98 644.2 25.2 241 3-243 4-246 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 5.3E-93 1.8E-97 629.7 25.6 233 4-236 2-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 3.9E-92 1.3E-96 631.1 25.0 233 4-237 25-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 1.9E-88 6.3E-93 607.1 16.8 227 6-240 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.6E-80 5.6E-85 545.1 21.3 215 6-232 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 96.2 0.12 4.1E-06 42.3 13.6 59 148-207 143-201 (283)
10 3vtx_A MAMA; tetratricopeptide 95.7 0.55 1.9E-05 36.5 17.1 160 9-203 7-169 (184)
11 3nf1_A KLC 1, kinesin light ch 95.7 0.77 2.6E-05 38.1 21.1 185 8-207 28-227 (311)
12 3n71_A Histone lysine methyltr 94.1 0.78 2.7E-05 43.8 13.6 100 94-207 326-425 (490)
13 3u3w_A Transcriptional activat 93.5 3.1 0.00011 35.2 18.4 71 125-207 158-228 (293)
14 2qfc_A PLCR protein; TPR, HTH, 93.4 3.2 0.00011 35.1 16.4 76 118-205 151-226 (293)
15 3ro2_A PINS homolog, G-protein 92.9 3.4 0.00012 34.0 20.0 190 8-207 6-215 (338)
16 3qww_A SET and MYND domain-con 92.8 0.7 2.4E-05 43.4 10.7 100 94-207 315-414 (433)
17 3qwp_A SET and MYND domain-con 92.7 0.69 2.4E-05 43.2 10.5 58 149-207 346-403 (429)
18 3edt_B KLC 2, kinesin light ch 92.4 0.91 3.1E-05 36.8 9.8 94 99-206 23-116 (283)
19 3hym_B Cell division cycle pro 92.3 4.2 0.00015 33.7 14.9 46 148-202 252-297 (330)
20 1fch_A Peroxisomal targeting s 92.1 4.8 0.00016 34.3 14.5 57 9-67 100-156 (368)
21 3u4t_A TPR repeat-containing p 92.0 4.2 0.00015 33.0 14.2 53 150-203 197-249 (272)
22 4i17_A Hypothetical protein; T 91.9 4.1 0.00014 32.6 13.4 60 8-68 8-67 (228)
23 3ro2_A PINS homolog, G-protein 91.8 4.8 0.00016 33.1 17.0 55 149-206 200-254 (338)
24 3fp2_A TPR repeat-containing p 91.5 7.7 0.00026 34.9 16.8 49 148-205 444-492 (537)
25 3qww_A SET and MYND domain-con 91.2 1 3.5E-05 42.3 9.8 58 149-207 315-372 (433)
26 3ulq_A Response regulator aspa 91.0 7.4 0.00025 34.0 17.0 175 12-206 108-295 (383)
27 3ulq_A Response regulator aspa 91.0 2.1 7.2E-05 37.6 11.3 73 120-206 101-174 (383)
28 4a1s_A PINS, partner of inscut 90.9 7.5 0.00026 33.8 22.8 191 8-207 49-255 (411)
29 3n71_A Histone lysine methyltr 90.6 1.2 4.1E-05 42.4 9.8 58 149-207 326-383 (490)
30 4g1t_A Interferon-induced prot 90.1 9.7 0.00033 33.8 17.2 49 149-202 351-399 (472)
31 2gw1_A Mitochondrial precursor 89.2 11 0.00039 33.4 15.0 55 148-203 205-265 (514)
32 3sf4_A G-protein-signaling mod 88.9 10 0.00035 32.4 19.3 53 149-205 204-257 (406)
33 4abn_A Tetratricopeptide repea 88.8 14 0.00049 34.0 16.9 173 8-203 103-286 (474)
34 3ro3_A PINS homolog, G-protein 88.4 5.6 0.00019 28.8 14.2 149 9-205 11-159 (164)
35 4eqf_A PEX5-related protein; a 88.4 11 0.00038 32.2 16.9 59 8-68 66-124 (365)
36 3q15_A PSP28, response regulat 87.9 3.1 0.00011 36.5 9.9 75 119-206 98-172 (378)
37 3qwp_A SET and MYND domain-con 87.6 1.5 5E-05 41.0 7.9 58 149-207 304-361 (429)
38 3sf4_A G-protein-signaling mod 87.5 13 0.00043 31.8 22.6 189 9-206 11-218 (406)
39 4a1s_A PINS, partner of inscut 87.4 14 0.00047 32.1 18.3 178 10-206 89-294 (411)
40 2y4t_A DNAJ homolog subfamily 87.2 15 0.0005 32.2 15.4 47 148-203 311-357 (450)
41 4gcn_A Protein STI-1; structur 87.1 1.8 6.1E-05 32.3 6.8 49 148-205 24-72 (127)
42 2xpi_A Anaphase-promoting comp 86.7 19 0.00064 33.0 18.2 47 148-203 532-578 (597)
43 2q7f_A YRRB protein; TPR, prot 86.5 10 0.00036 29.8 16.5 59 8-68 58-116 (243)
44 2gw1_A Mitochondrial precursor 86.2 18 0.0006 32.1 15.3 171 9-204 306-478 (514)
45 3q15_A PSP28, response regulat 86.0 17 0.00057 31.7 17.2 54 148-205 238-291 (378)
46 2y4t_A DNAJ homolog subfamily 85.9 17 0.00059 31.8 17.2 167 10-203 146-323 (450)
47 3ieg_A DNAJ homolog subfamily 85.5 15 0.0005 30.6 19.7 47 148-203 288-334 (359)
48 2ho1_A Type 4 fimbrial biogene 85.2 13 0.00044 29.7 15.4 165 8-203 38-203 (252)
49 3qky_A Outer membrane assembly 84.7 15 0.00051 30.0 18.6 64 7-71 15-80 (261)
50 2xpi_A Anaphase-promoting comp 84.1 25 0.00086 32.1 19.5 55 148-204 491-545 (597)
51 4b4t_Q 26S proteasome regulato 84.0 21 0.00072 31.2 18.3 184 10-207 58-248 (434)
52 1fch_A Peroxisomal targeting s 83.9 19 0.00063 30.5 18.2 58 8-67 65-122 (368)
53 4eqf_A PEX5-related protein; a 82.9 21 0.00072 30.3 16.2 59 8-68 100-158 (365)
54 2vq2_A PILW, putative fimbrial 82.3 15 0.00052 28.3 16.5 167 8-204 9-176 (225)
55 3u3w_A Transcriptional activat 82.3 8 0.00027 32.6 9.6 90 102-205 93-185 (293)
56 2pl2_A Hypothetical conserved 82.2 18 0.00061 29.0 13.8 57 9-67 7-63 (217)
57 1qqe_A Vesicular transport pro 81.8 22 0.00075 30.0 12.2 52 148-203 134-186 (292)
58 4gyw_A UDP-N-acetylglucosamine 81.8 43 0.0015 33.2 17.2 166 8-209 10-179 (723)
59 3rkv_A Putative peptidylprolyl 81.1 2.3 7.8E-05 32.5 5.1 54 149-203 28-91 (162)
60 3u4t_A TPR repeat-containing p 81.1 17 0.00059 29.2 10.9 59 8-68 4-62 (272)
61 3ieg_A DNAJ homolog subfamily 81.0 22 0.00077 29.4 18.1 168 11-204 124-301 (359)
62 3hym_B Cell division cycle pro 80.8 22 0.00076 29.2 17.4 56 148-204 209-265 (330)
63 2ifu_A Gamma-SNAP; membrane fu 80.2 25 0.00084 29.9 12.1 52 148-202 171-222 (307)
64 3cv0_A Peroxisome targeting si 80.0 23 0.0008 29.0 16.4 44 8-52 22-65 (327)
65 3fp2_A TPR repeat-containing p 79.6 34 0.0012 30.6 18.0 54 150-203 213-271 (537)
66 4gco_A Protein STI-1; structur 78.8 6.1 0.00021 29.3 6.8 46 149-203 30-75 (126)
67 1elr_A TPR2A-domain of HOP; HO 77.8 13 0.00043 25.9 8.0 53 149-203 55-107 (131)
68 2q7f_A YRRB protein; TPR, prot 77.3 24 0.00082 27.6 12.0 59 9-69 25-83 (243)
69 3nf1_A KLC 1, kinesin light ch 77.2 28 0.00095 28.3 20.6 181 9-204 71-307 (311)
70 3lf9_A 4E10_D0_1IS1A_001_C (T1 77.0 11 0.00039 29.3 7.8 86 21-111 11-103 (121)
71 3uq3_A Heat shock protein STI1 76.7 25 0.00087 27.6 19.1 56 8-66 6-61 (258)
72 3ro3_A PINS homolog, G-protein 76.4 18 0.00063 25.8 10.7 56 149-207 66-121 (164)
73 4gcn_A Protein STI-1; structur 74.9 8.7 0.0003 28.4 6.7 52 149-202 59-110 (127)
74 4g1t_A Interferon-induced prot 74.0 7.1 0.00024 34.7 7.0 54 149-203 68-122 (472)
75 2l6j_A TPR repeat-containing p 72.7 12 0.00041 25.6 6.6 45 149-202 21-65 (111)
76 3uq3_A Heat shock protein STI1 72.5 33 0.0011 26.9 16.4 32 8-39 80-111 (258)
77 3gw4_A Uncharacterized protein 71.9 30 0.001 26.3 10.7 75 120-206 64-138 (203)
78 3sz7_A HSC70 cochaperone (SGT) 71.6 19 0.00065 27.1 8.1 46 149-203 62-107 (164)
79 2pl2_A Hypothetical conserved 71.6 37 0.0013 27.1 17.3 45 8-53 40-84 (217)
80 3upv_A Heat shock protein STI1 71.2 25 0.00085 25.0 11.8 48 149-205 55-102 (126)
81 1na3_A Designed protein CTPR2; 71.1 16 0.00055 23.9 6.8 46 149-203 26-71 (91)
82 3k9i_A BH0479 protein; putativ 70.2 15 0.0005 26.2 6.8 47 149-204 44-90 (117)
83 2e2e_A Formate-dependent nitri 70.1 33 0.0011 25.9 12.4 46 149-203 98-143 (177)
84 2kck_A TPR repeat; tetratricop 68.0 19 0.00066 24.1 6.8 46 149-203 23-68 (112)
85 2xev_A YBGF; tetratricopeptide 67.7 24 0.00082 24.8 7.6 49 149-203 56-104 (129)
86 2dba_A Smooth muscle cell asso 66.7 15 0.0005 26.4 6.2 50 149-204 45-94 (148)
87 2ho1_A Type 4 fimbrial biogene 66.6 46 0.0016 26.3 16.4 61 8-70 72-132 (252)
88 3ma5_A Tetratricopeptide repea 66.4 30 0.001 24.0 11.2 58 8-67 8-65 (100)
89 2kc7_A BFR218_protein; tetratr 66.1 23 0.0008 23.9 6.9 47 149-203 17-63 (99)
90 2hr2_A Hypothetical protein; a 65.9 22 0.00076 28.6 7.6 54 148-203 27-85 (159)
91 2kat_A Uncharacterized protein 64.4 33 0.0011 23.9 12.2 59 8-68 20-78 (115)
92 2qfc_A PLCR protein; TPR, HTH, 64.1 62 0.0021 26.9 16.8 189 7-218 75-276 (293)
93 2fbn_A 70 kDa peptidylprolyl i 63.3 50 0.0017 25.5 12.3 31 9-39 40-70 (198)
94 3ma5_A Tetratricopeptide repea 62.9 35 0.0012 23.6 9.6 72 149-235 24-95 (100)
95 3upv_A Heat shock protein STI1 62.8 25 0.00085 25.0 6.8 47 149-204 21-67 (126)
96 3cv0_A Peroxisome targeting si 62.5 62 0.0021 26.3 17.9 32 9-40 57-88 (327)
97 4gco_A Protein STI-1; structur 62.1 25 0.00084 25.8 6.8 46 149-203 64-109 (126)
98 4gfq_A Ribosome-recycling fact 61.7 20 0.00067 30.6 6.7 73 38-111 127-199 (209)
99 2lni_A Stress-induced-phosphop 60.5 30 0.001 24.0 6.8 46 149-203 67-112 (133)
100 3as5_A MAMA; tetratricopeptide 60.0 47 0.0016 24.2 16.4 57 10-68 11-67 (186)
101 3bee_A Putative YFRE protein; 59.9 12 0.00042 26.8 4.5 31 9-39 45-75 (93)
102 1xnf_A Lipoprotein NLPI; TPR, 59.3 59 0.002 25.8 9.2 48 148-204 93-140 (275)
103 1lyp_A CAP18; lipopolysacchari 59.3 20 0.00067 20.8 4.3 26 83-108 4-29 (32)
104 3sz7_A HSC70 cochaperone (SGT) 58.9 54 0.0018 24.5 11.6 31 9-39 13-43 (164)
105 3vtx_A MAMA; tetratricopeptide 58.5 28 0.00097 26.3 6.8 46 149-203 22-67 (184)
106 1xnf_A Lipoprotein NLPI; TPR, 58.4 67 0.0023 25.4 15.4 49 150-203 195-243 (275)
107 2xcb_A PCRH, regulatory protei 57.7 53 0.0018 24.0 8.7 48 149-205 69-116 (142)
108 1w3b_A UDP-N-acetylglucosamine 57.5 90 0.0031 26.6 15.2 32 9-40 69-100 (388)
109 2kat_A Uncharacterized protein 56.7 44 0.0015 23.3 7.2 49 149-206 36-84 (115)
110 1dd5_A Ribosome recycling fact 56.0 30 0.001 28.8 6.8 73 38-111 103-175 (185)
111 2h6f_A Protein farnesyltransfe 55.7 1.1E+02 0.0039 27.3 14.6 59 8-68 98-157 (382)
112 1qqe_A Vesicular transport pro 55.7 33 0.0011 28.8 7.3 53 149-204 54-106 (292)
113 4ga2_A E3 SUMO-protein ligase 55.6 31 0.0011 25.9 6.5 31 10-40 34-64 (150)
114 2yhc_A BAMD, UPF0169 lipoprote 55.2 77 0.0026 25.1 19.6 62 8-70 5-68 (225)
115 2vgx_A Chaperone SYCD; alterna 54.8 33 0.0011 25.8 6.5 47 149-204 72-118 (148)
116 1elw_A TPR1-domain of HOP; HOP 54.7 37 0.0012 22.8 6.3 45 149-202 55-99 (118)
117 3k9i_A BH0479 protein; putativ 54.6 53 0.0018 23.1 8.7 59 8-68 28-86 (117)
118 2vyi_A SGTA protein; chaperone 54.4 44 0.0015 22.8 6.8 16 188-203 59-74 (131)
119 2vyi_A SGTA protein; chaperone 54.1 45 0.0015 22.7 6.8 47 149-204 63-109 (131)
120 1ise_A Ribosome recycling fact 54.0 31 0.0011 28.7 6.6 73 38-111 103-175 (185)
121 1elw_A TPR1-domain of HOP; HOP 54.0 46 0.0016 22.2 6.8 47 149-204 21-67 (118)
122 2ifu_A Gamma-SNAP; membrane fu 54.0 98 0.0034 26.0 15.8 53 148-204 131-184 (307)
123 1ihg_A Cyclophilin 40; ppiase 52.7 13 0.00044 33.3 4.4 54 149-203 240-301 (370)
124 1eh1_A Ribosome recycling fact 52.7 31 0.0011 28.7 6.4 73 38-111 104-176 (185)
125 1a17_A Serine/threonine protei 52.7 43 0.0015 24.3 6.8 47 149-204 64-110 (166)
126 1w3b_A UDP-N-acetylglucosamine 52.4 1.1E+02 0.0037 26.0 15.0 44 8-52 34-77 (388)
127 1is1_A Ribosome recycling fact 52.3 33 0.0011 28.5 6.5 69 38-111 103-175 (185)
128 2h6f_A Protein farnesyltransfe 52.2 1.3E+02 0.0045 26.9 14.1 44 10-54 203-246 (382)
129 2dba_A Smooth muscle cell asso 52.1 46 0.0016 23.5 6.8 46 149-203 82-127 (148)
130 4ga2_A E3 SUMO-protein ligase 51.7 44 0.0015 25.1 6.8 46 149-203 48-93 (150)
131 1wqg_A Ribosome recycling fact 51.2 35 0.0012 28.4 6.5 69 38-111 103-175 (185)
132 2xcb_A PCRH, regulatory protei 50.9 69 0.0024 23.3 10.8 31 9-39 20-50 (142)
133 1ge9_A Ribosome recycling fact 50.4 67 0.0023 26.6 8.1 71 37-111 104-174 (184)
134 3gyz_A Chaperone protein IPGC; 49.7 40 0.0014 26.0 6.3 47 148-203 86-132 (151)
135 1na0_A Designed protein CTPR3; 49.6 57 0.0019 21.9 6.8 46 149-203 26-71 (125)
136 2kck_A TPR repeat; tetratricop 48.5 56 0.0019 21.6 7.7 29 11-39 10-38 (112)
137 1ya0_A SMG-7 transcript varian 48.4 52 0.0018 31.3 8.0 47 128-186 158-210 (497)
138 1na0_A Designed protein CTPR3; 46.5 64 0.0022 21.7 6.8 46 149-203 60-105 (125)
139 1kt0_A FKBP51, 51 kDa FK506-bi 46.4 31 0.0011 31.5 6.0 53 149-203 285-345 (457)
140 1hh8_A P67PHOX, NCF-2, neutrop 46.3 56 0.0019 25.1 6.8 46 149-203 54-99 (213)
141 3urz_A Uncharacterized protein 45.8 55 0.0019 25.8 6.8 32 7-38 4-35 (208)
142 2ond_A Cleavage stimulation fa 45.7 1.3E+02 0.0045 25.0 16.1 51 148-203 219-269 (308)
143 3gyz_A Chaperone protein IPGC; 45.3 1E+02 0.0034 23.6 9.5 44 8-52 37-80 (151)
144 2v5f_A Prolyl 4-hydroxylase su 45.1 78 0.0027 22.3 7.4 53 149-203 22-74 (104)
145 2hr2_A Hypothetical protein; a 45.0 40 0.0014 27.1 5.7 78 149-232 74-154 (159)
146 1elr_A TPR2A-domain of HOP; HO 44.8 67 0.0023 21.8 6.5 41 9-51 81-121 (131)
147 1wao_1 Serine/threonine protei 42.9 49 0.0017 30.5 6.8 24 178-202 78-101 (477)
148 2ooe_A Cleavage stimulation fa 42.4 30 0.001 31.7 5.3 53 148-209 62-114 (530)
149 3as5_A MAMA; tetratricopeptide 42.2 78 0.0027 22.9 6.8 47 149-204 93-139 (186)
150 2vq2_A PILW, putative fimbrial 41.5 1.1E+02 0.0038 23.0 16.7 62 9-71 44-105 (225)
151 1xi4_A Clathrin heavy chain; a 40.7 4.1E+02 0.014 29.3 14.1 23 179-201 1284-1306(1630)
152 1zu2_A Mitochondrial import re 40.7 56 0.0019 26.2 6.0 95 128-236 42-143 (158)
153 4abn_A Tetratricopeptide repea 39.2 2.2E+02 0.0075 25.8 13.6 161 19-203 80-249 (474)
154 2c2l_A CHIP, carboxy terminus 39.2 49 0.0017 27.8 5.8 50 153-206 52-103 (281)
155 2r5s_A Uncharacterized protein 38.7 73 0.0025 24.1 6.3 32 9-40 110-141 (176)
156 3caz_A BAR protein; thermo-aci 38.6 1.8E+02 0.0061 24.6 11.3 111 13-164 100-210 (294)
157 1hxi_A PEX5, peroxisome target 38.5 1.1E+02 0.0036 21.9 8.5 58 8-67 18-75 (121)
158 1na3_A Designed protein CTPR2; 38.3 57 0.002 21.0 5.0 59 8-68 10-68 (91)
159 3onj_A T-snare VTI1; helix, HA 37.7 1.2E+02 0.004 22.2 9.7 78 23-101 10-90 (97)
160 2l6j_A TPR repeat-containing p 36.8 92 0.0032 20.7 6.3 33 8-40 5-37 (111)
161 3gw4_A Uncharacterized protein 35.9 1.4E+02 0.0046 22.4 19.0 75 120-207 105-179 (203)
162 2wh5_A Acyl-COA-binding domain 33.9 63 0.0022 24.3 4.9 36 21-56 10-46 (106)
163 1hh8_A P67PHOX, NCF-2, neutrop 32.8 1.6E+02 0.0055 22.3 13.3 54 148-202 87-148 (213)
164 3qky_A Outer membrane assembly 32.7 1.9E+02 0.0064 23.1 16.6 64 8-71 53-125 (261)
165 2e2e_A Formate-dependent nitri 32.5 92 0.0032 23.2 5.9 48 149-204 61-110 (177)
166 2vsy_A XCC0866; transferase, g 32.2 3E+02 0.01 25.2 15.0 32 8-39 24-55 (568)
167 3qou_A Protein YBBN; thioredox 32.1 1.4E+02 0.0047 24.9 7.5 32 9-40 221-252 (287)
168 2fbn_A 70 kDa peptidylprolyl i 31.5 1.2E+02 0.0041 23.2 6.6 59 8-68 89-147 (198)
169 2yhc_A BAMD, UPF0169 lipoprote 30.9 1.9E+02 0.0066 22.7 8.1 46 8-53 42-89 (225)
170 2wb7_A PT26-6P; extra chromoso 29.7 1.6E+02 0.0055 28.3 8.0 52 136-189 436-488 (526)
171 4gyw_A UDP-N-acetylglucosamine 28.7 1E+02 0.0035 30.4 6.8 47 148-203 93-139 (723)
172 2xev_A YBGF; tetratricopeptide 28.3 1.5E+02 0.005 20.4 9.9 57 10-67 5-63 (129)
173 2g0u_A Type III secretion syst 27.4 22 0.00075 26.4 1.3 61 118-185 4-68 (92)
174 2if4_A ATFKBP42; FKBP-like, al 27.2 52 0.0018 28.6 4.0 49 149-203 196-258 (338)
175 4i17_A Hypothetical protein; T 26.7 2.2E+02 0.0075 21.9 15.0 59 8-68 43-101 (228)
176 3iyk_A VP5; icosahedral virus; 26.6 3.6E+02 0.012 25.8 9.7 196 21-229 121-337 (526)
177 2w9y_A CE-FAR-7, fatty acid/re 26.6 22 0.00074 28.4 1.2 75 94-171 60-136 (140)
178 3urz_A Uncharacterized protein 26.6 2.3E+02 0.0077 22.0 13.9 28 13-40 60-87 (208)
179 3rkv_A Putative peptidylprolyl 26.5 1.9E+02 0.0065 21.1 12.8 71 149-236 80-150 (162)
180 4h7y_A Dual specificity protei 26.2 75 0.0026 25.9 4.3 74 115-202 10-87 (161)
181 1a17_A Serine/threonine protei 25.9 1.8E+02 0.0062 20.7 8.3 59 9-69 49-107 (166)
182 2kc7_A BFR218_protein; tetratr 25.4 1.5E+02 0.0051 19.5 7.8 31 10-40 3-33 (99)
183 1ouv_A Conserved hypothetical 22.4 2.9E+02 0.01 21.9 13.2 26 10-35 9-34 (273)
184 3ub0_A Non-structural protein 22.1 70 0.0024 26.7 3.4 39 148-206 19-57 (199)
185 3u64_A Protein TP_0956; tetrat 22.0 1.1E+02 0.0037 27.4 5.0 62 129-203 206-268 (301)
186 2c2l_A CHIP, carboxy terminus 21.3 1.2E+02 0.0042 25.2 5.1 31 8-38 5-35 (281)
187 2pmr_A Uncharacterized protein 20.6 1.7E+02 0.0058 21.2 5.0 42 84-133 8-57 (87)
188 2vgx_A Chaperone SYCD; alterna 20.2 2.6E+02 0.009 20.5 10.6 44 8-52 22-65 (148)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=4.3e-96 Score=652.30 Aligned_cols=237 Identities=62% Similarity=0.997 Sum_probs=223.7
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH
Q 024885 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (261)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i 85 (261)
+|++++|+|||++||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999877888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC--hhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 024885 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAG--ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (261)
Q Consensus 86 ~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (261)
++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCCCC
Q 024885 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG 242 (261)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e~~~~~ 242 (261)
.+|||||||||||+||||||||||+|++++||.||++|||+||++||+|+|++|+|||+||||||||||+|+++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999977665
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.1e-95 Score=650.51 Aligned_cols=237 Identities=75% Similarity=1.135 Sum_probs=227.8
Q ss_pred CCCchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024885 1 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (261)
Q Consensus 1 ~~~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~ 80 (261)
|.++.+|++++|+|||++||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 25 ~~~m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 55567899999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 024885 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (261)
Q Consensus 81 ~~~~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (261)
+++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024885 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (261)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e 237 (261)
+|+++|||||||||||+||||||||||+|++++||.|||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=3.3e-95 Score=642.98 Aligned_cols=230 Identities=59% Similarity=0.944 Sum_probs=226.9
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH
Q 024885 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (261)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i 85 (261)
+|++++|+||||+||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999888888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhc
Q 024885 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (261)
Q Consensus 86 ~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 165 (261)
++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 87 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 166 (236)
T 3iqu_A 87 REYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhc
Q 024885 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWT 235 (261)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~ 235 (261)
|||||||||||+||||||||||+|++++||.|||+|||+||++||+|+|++|+|||+||||||||||+|+
T Consensus 167 L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 167 MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=4.3e-94 Score=644.23 Aligned_cols=241 Identities=70% Similarity=1.083 Sum_probs=224.4
Q ss_pred CchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024885 3 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (261)
Q Consensus 3 ~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~--~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~ 80 (261)
++++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.++++.
T Consensus 4 ~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 4 APTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp -CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 56689999999999999999999999999999998 9999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 024885 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (261)
Q Consensus 81 ~~~~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (261)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCC
Q 024885 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240 (261)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e~~~ 240 (261)
+|+.+|||||||||||+||||||||||+|++++||.||++|||+|++++|+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred CCc
Q 024885 241 DGE 243 (261)
Q Consensus 241 ~~~ 243 (261)
+++
T Consensus 244 ~~~ 246 (260)
T 1o9d_A 244 DGA 246 (260)
T ss_dssp ---
T ss_pred ccc
Confidence 665
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=5.3e-93 Score=629.70 Aligned_cols=233 Identities=75% Similarity=1.138 Sum_probs=227.0
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHH
Q 024885 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK 83 (261)
Q Consensus 4 ~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~ 83 (261)
|++|++++|+|||++|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~ 81 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLK 81 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 024885 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (261)
Q Consensus 84 ~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (261)
.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 82 ~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~ 161 (234)
T 2br9_A 82 MIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAM 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024885 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (261)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~ 236 (261)
.+||||||+||||+||||||||||+|++++||.|||+|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 162 ~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 162 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=3.9e-92 Score=631.13 Aligned_cols=233 Identities=63% Similarity=0.997 Sum_probs=226.8
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024885 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD---VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (261)
Q Consensus 4 ~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~---~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~ 80 (261)
+++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.++++.
T Consensus 25 ~~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 25 VNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 4579999999999999999999999999999998 9999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 024885 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (261)
Q Consensus 81 ~~~~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (261)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024885 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (261)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e 237 (261)
+| .+||||||+||||+||||||||||+|++++||.||++|||+|++++|+|+|++|+|+|+|||||||||++|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=1.9e-88 Score=607.14 Aligned_cols=227 Identities=24% Similarity=0.410 Sum_probs=196.5
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hhhCc-hHHHH
Q 024885 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EVNAK 83 (261)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~-~~~~~-~~~~~ 83 (261)
+|++++|+|||++||||||||+.+| ++.+++||.||||||||||||+|+++|+|||+|++++|++ +.+|+ +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 5999999999999999999999999 7889999999999999999999999999999999999999 67777 88899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 024885 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (261)
Q Consensus 84 ~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (261)
.+++||++|++||..+|++||++||++|||.++++ +||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~ 183 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRER 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred hcC--CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCccchHhHHHHHHHHHhhHhhhccCC
Q 024885 164 ADL--PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE---AISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI 238 (261)
Q Consensus 164 ~~L--~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~---Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~e~ 238 (261)
++| |||||||||||||||||||||+|+|++||.|||+|||+ ||+++|+|+|++ |+||||||||||+|+++.
T Consensus 184 ~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~ 259 (268)
T 3efz_A 184 SFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGC 259 (268)
T ss_dssp HHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTC
T ss_pred HhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccc
Confidence 889 99999999999999999999999999999999999999 999999999987 999999999999999986
Q ss_pred CC
Q 024885 239 PE 240 (261)
Q Consensus 239 ~~ 240 (261)
++
T Consensus 260 ~~ 261 (268)
T 3efz_A 260 SG 261 (268)
T ss_dssp CT
T ss_pred cc
Confidence 55
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.6e-80 Score=545.05 Aligned_cols=215 Identities=21% Similarity=0.246 Sum_probs=199.0
Q ss_pred hHHhHH---HHHHHHHHhCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCc
Q 024885 6 ERENFV---YVAKLAEQAERYDEMVDAMKNVAK----LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN 78 (261)
Q Consensus 6 ~re~l~---~~Aklaeq~eRy~Dm~~~mk~~i~----~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~ 78 (261)
+|++++ |+|||++||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 488999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHH
Q 024885 79 EVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (261)
Q Consensus 79 ~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 158 (261)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8889999999999999999999999999999999987 999999999999999999999998 89999999999
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCccchHhHHHHHHHHHhhHh
Q 024885 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA---ISELDTLNEESYKDSTLIMQLLRDNLT 232 (261)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A---i~~ld~l~ee~~~ds~~IlqLLrdNl~ 232 (261)
+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+.. +.+.++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 3333333 347889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.22 E-value=0.12 Score=42.29 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
.+.|...|++|+.+++...++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 357999999999999878888899888888888877776 69999999999999876543
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.67 E-value=0.55 Score=36.52 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH-HH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI-KE 87 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i-~~ 87 (261)
-+..++.+..+-|+|++++.+++++++.+|.- .+=...+..+|-. .+....+...+........ ........+ .-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHHHHHH
Confidence 35568889999999999999999999988764 4445555555543 2334444444443222211 111111000 00
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhc
Q 024885 88 Y--RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (261)
Q Consensus 88 y--k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 165 (261)
+ .... ++-...+..++. +-|. + .. .+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 83 ~~~~~~~-~~a~~~~~~a~~-----~~~~--~--~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 83 NFMIDEK-QAAIDALQRAIA-----LNTV--Y--AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI---- 136 (184)
T ss_dssp HHHTTCH-HHHHHHHHHHHH-----HCTT--C--HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHcCCH-HHHHHHHHHHHH-----hCcc--c--hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh----
Confidence 0 0000 111112222221 2232 1 11 222345444222 11 35788999998865
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 -~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 -KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp -CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred -cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34554 34455555555 47999999988777654
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.66 E-value=0.77 Score=38.09 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=102.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hC
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKL-------DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KG 77 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~-------~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~-~~--~~ 77 (261)
+-+..++.+....|+|++++.++++++.. +.+....-...+..+|-. .+....+...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 44667888899999999999999998864 222222333334444322 233333444433211110 00 00
Q ss_pred chHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHH
Q 024885 78 NEVNA----KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSM 152 (261)
Q Consensus 78 ~~~~~----~~i~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~ 152 (261)
.+... ....-|. ..=-++-...+...+.+.....-+ +....+..+-..|..|...-. .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~~~----------~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK---DHPDVAKQLNNLALLCQNQGK----------YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHTTTC----------HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHHcCC----------HHHHH
Confidence 11100 0001110 000122334444555554433222 122233333445555433211 36799
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 153 KAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 153 ~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
..|++|+.++....++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999887788889888888888877776 69999999999999876543
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.10 E-value=0.78 Score=43.77 Aligned_cols=100 Identities=6% Similarity=0.037 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 024885 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (261)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 173 (261)
+|-..+|...+.+-...|=|.. + ..+--+.--|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3556677788877776665432 2 111122223333433211 25699999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887 69999999999999765544
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=93.47 E-value=3.1 Score=35.22 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=55.0
Q ss_pred HHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 125 YKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 125 ~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+...|..|..+-. -++|...|++|+++++ .+|..+|....+..|.+..|++ +|+.++|+...++|++-
T Consensus 158 ~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 158 ENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 4445666644322 3679999999999986 4666777777788999998887 69999999999999877
Q ss_pred HHH
Q 024885 205 AIS 207 (261)
Q Consensus 205 Ai~ 207 (261)
+..
T Consensus 226 ~~~ 228 (293)
T 3u3w_A 226 SCR 228 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 14
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.38 E-value=3.2 Score=35.14 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=51.6
Q ss_pred ChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHH
Q 024885 118 GESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHL 197 (261)
Q Consensus 118 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~i 197 (261)
....+..+...|..|...-. -+.|...|++|+++++. .|....+...+..|.+..|+. +|+.++|+..
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 33344445556777754322 35799999999999863 443222233566777777665 7999999999
Q ss_pred HHHHHHHH
Q 024885 198 AKQAFDEA 205 (261)
Q Consensus 198 ak~afd~A 205 (261)
.++|++-+
T Consensus 219 ~~kal~~~ 226 (293)
T 2qfc_A 219 VNKAIEIS 226 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 15
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.91 E-value=3.4 Score=34.02 Aligned_cols=190 Identities=11% Similarity=0.033 Sum_probs=99.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK 83 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eE----RnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~ 83 (261)
..+...+....+.|+|++++.+++++++..|. +.+. ...+..+|- ..+....+...+..........+.+....
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 46778899999999999999999999987655 2221 123333332 22333444444432211111111111000
Q ss_pred -----HHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcc----------cchhHHHH
Q 024885 84 -----RIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFK----------FGDEKKEA 147 (261)
Q Consensus 84 -----~i~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~~~ 147 (261)
...-|. ..--++-...+...+.+... ..+....+..+...|..|...-... ...+-...
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 000010 00112233444455554433 2233344445555677666554411 11223344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
.+.|...|++|+.++.. .+ .+|.......+.+.. |.-.|+.++|+...++++.-+-.
T Consensus 159 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA-LG-DRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHH-HT-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cC-CHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 67888889999888864 22 234433444444444 44579999999998888766543
No 16
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.77 E-value=0.7 Score=43.39 Aligned_cols=100 Identities=14% Similarity=0.089 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 024885 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (261)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 173 (261)
+|-..+|...+.+-.+.|=|.. + ..+=-+.--|.-|+.. |. -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~H--p-~~a~~~~nLa~~y~~~-----g~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSN--V-YMLHMMYQAMGVCLYM-----QD-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhc--h-HHHHHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 4556677777777777665532 1 1111112233333222 11 25799999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
.....|.+.-|+. .|+.++|..+-++|+.=-..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999998776554
No 17
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.72 E-value=0.69 Score=43.22 Aligned_cols=58 Identities=14% Similarity=0.085 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999889999999999999999998877 69999999999998876554
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.42 E-value=0.91 Score=36.82 Aligned_cols=94 Identities=16% Similarity=0.165 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhh
Q 024885 99 ICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLAL 178 (261)
Q Consensus 99 ~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaL 178 (261)
++...+++....+-+ +....+-.+...|..|...-. .+.|...|++|+.++...+.+.+|.......
T Consensus 23 ~~~~al~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 23 LCKQALEDLEKTSGH---DHPDVATMLNILALVYRDQNK----------YKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp HHHHHHHHHHHHHCS---SSHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHccc----------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 344444455444422 222334444456666654433 3579999999999998877888888777777
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 179 NFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 179 N~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
+.+..++ ..|+.++|+...++|+..+.
T Consensus 90 ~l~~~~~-~~g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 90 NLAVLYG-KRGKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp HHHHHHH-TTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHHHHH
Confidence 7777666 47999999999999887653
No 19
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.32 E-value=4.2 Score=33.74 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
.+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 357889999998663 3343 23344455444 4799999988776654
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.09 E-value=4.8 Score=34.29 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
-+..++.+....|+|++++.+++++++.+|. +.+=...+..+|-. .+....+...+.
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4556778888888888888888888877665 34444455555433 234444444444
No 21
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.00 E-value=4.2 Score=33.02 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.|...|++|+++....-.+.++.......+.+.+ |...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 4788999999998543222222222344444444 4557999999988777664
No 22
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.92 E-value=4.1 Score=32.64 Aligned_cols=60 Identities=13% Similarity=0.031 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
+.+..++.+..+.|+|++++.++.+++..+|.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 56788899999999999999999999988874444444445555543 3455556666544
No 23
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.76 E-value=4.8 Score=33.09 Aligned_cols=55 Identities=16% Similarity=-0.005 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
+.|...|++|++++.. . .+|...+.+++.-...|...|+.++|+...+++++-.-
T Consensus 200 ~~A~~~~~~a~~~~~~-~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKE-F--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5788899999988864 2 23444444444444555567999999998888876543
No 24
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.48 E-value=7.7 Score=34.94 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46788888888755 34555 34455555555 4799999999888877654
No 25
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.23 E-value=1 Score=42.27 Aligned_cols=58 Identities=9% Similarity=0.015 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888887776 79999999999999776554
No 26
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.04 E-value=7.4 Score=33.96 Aligned_cols=175 Identities=7% Similarity=-0.030 Sum_probs=89.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH-----HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCc-hHHH---
Q 024885 12 YVAKLAEQAERYDEMVDAMKNVAKLDVELTV-----EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN-EVNA--- 82 (261)
Q Consensus 12 ~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~-----eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~-~~~~--- 82 (261)
+++.+....|+|++++.++++.+..-..... +=...+..+|-. .+..-.|...+.....--...+. ....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3788888899999999999999865333222 122334444332 23333333333221111000111 0000
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHH
Q 024885 83 ----KRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (261)
Q Consensus 83 ----~~i~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 158 (261)
..+-...... ++=...+...+.+.... .+.......+.-.|..|..+-. -+.|...|++|
T Consensus 187 ~~~lg~~~~~~g~~-~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~a 250 (383)
T 3ulq_A 187 HSLFATNFLDLKQY-EDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
Confidence 0000000001 12233344444444322 2233333333445666643322 36799999999
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
+++++..-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 251 l~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 251 IAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 999875322 14444455566665554 7999999999998877654
No 27
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.04 E-value=2.1 Score=37.60 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=49.0
Q ss_pred hHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH-HhhhHHHHHHHHhCChHHHHHHH
Q 024885 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG-LALNFSVFYYEIMNSPERACHLA 198 (261)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg-LaLN~SVF~yEi~~~~~~A~~ia 198 (261)
...+|+-.+|.+|...-. -+.|...|++|+.+++. ++ +|...+ ...+.+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-VK--DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC--CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-CC--CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 345666667877754432 35789999999998853 32 344444 4445555555 589999999999
Q ss_pred HHHHHHHH
Q 024885 199 KQAFDEAI 206 (261)
Q Consensus 199 k~afd~Ai 206 (261)
++|++-.-
T Consensus 167 ~~al~~~~ 174 (383)
T 3ulq_A 167 RQAYEIYK 174 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877543
No 28
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=90.91 E-value=7.5 Score=33.77 Aligned_cols=191 Identities=14% Similarity=0.093 Sum_probs=98.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HH-
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NA- 82 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~---eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~- 82 (261)
..+..++....+.|+|++++.++++++...+.-.. .=...+..+|- ..+....+...+....+.....+... ..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 45667888889999999999999999987665221 11223333332 23444445444433221111001111 00
Q ss_pred ---HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhc-------ccchhHHHHHHHH
Q 024885 83 ---KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEF-------KFGDEKKEAAANS 151 (261)
Q Consensus 83 ---~~i~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~~~A 151 (261)
....-|. ..=-++-...+..++.+.... .+....+..+...|..|...-.. ....+-....+.|
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 0000000 000123334444555544332 12223333444455555544330 0012223446789
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 152 MKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 152 ~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
...|++|++++.. + +.+|.......+.+..++ -.|+.++|+...++++.-.-.
T Consensus 203 ~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 203 VEFYQENLKLMRD-L-GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHH-H-TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 9999999998864 2 223444444455555444 579999999998888765543
No 29
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.56 E-value=1.2 Score=42.42 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+.|...|++|+++.+..|.|.||..+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 45778899999999889999999999999999888876 69999999999999876554
No 30
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.15 E-value=9.7 Score=33.83 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
++|.++|++|+++ .|.++..-.+.+++..|++...++.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999853 344455556677888888778899999988766654
No 31
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.22 E-value=11 Score=33.37 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADL--PPTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L--~pt~----PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887443223 4444 5555666666666655 6999999998888764
No 32
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=88.94 E-value=10 Score=32.41 Aligned_cols=53 Identities=17% Similarity=0.062 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHH-HhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLG-LALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLg-LaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
+.|...|++|+.++.. .+ +|..++ ...|.+.. |..+|+.++|+...++++.-.
T Consensus 204 ~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-FG--DKAAERRAYSNLGNA-YIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cC--CcHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHH
Confidence 5688888888888764 22 233333 33444444 445788888888888877554
No 33
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.82 E-value=14 Score=33.95 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=90.2
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERY-DEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIK 86 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~ 86 (261)
.-+..++++....|+| ++++.+++++++.+|.. .+=...|..+|-.. +....|...+....+.... ......+-.
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~ 178 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSM 178 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHH
Confidence 3456677777788888 88888888888777653 44555566555432 4444444444332211110 011111111
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHH
Q 024885 87 EYRQ----------KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYE 156 (261)
Q Consensus 87 ~yk~----------ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~ 156 (261)
-|.. .=-++-...++..+.+ -|.. ..+ +-..|..|.... |..+. ...-.+.|..+|+
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~~~ 245 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALSAYA 245 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHHHHH
Confidence 1111 0012223334444432 2321 222 223455544330 11122 1123578999999
Q ss_pred HHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 157 TATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 157 ~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 246 ~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 246 QAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99876 23222555667777777776 6999999988777754
No 34
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.44 E-value=5.6 Score=28.76 Aligned_cols=149 Identities=11% Similarity=0.098 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEY 88 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~y 88 (261)
-+..++.+....|+|++++.++++.++..+.... ......++-+ +..+-.. .++ ....+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~-----------l~~~~~~---~g~--~~~A~--- 69 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD--KAAERIAYSN-----------LGNAYIF---LGE--FETAS--- 69 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--HHHHHHHHHH-----------HHHHHHH---TTC--HHHHH---
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC--chHHHHHHHH-----------HHHHHHH---cCC--HHHHH---
Confidence 3567888888999999999999998865322111 1111122221 1111111 111 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 024885 89 RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPP 168 (261)
Q Consensus 89 k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 168 (261)
..+...+.+.... .++...+..+...|..|...-. -+.|...|++|++++.. .+
T Consensus 70 ---------~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~a~~~~~~-~~- 123 (164)
T 3ro3_A 70 ---------EYYKKTLLLARQL-----KDRAVEAQSCYSLGNTYTLLQD----------YEKAIDYHLKHLAIAQE-LK- 123 (164)
T ss_dssp ---------HHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-TT-
T ss_pred ---------HHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHH-cc-
Confidence 2233333333221 1222333333344555433211 35789999999999864 22
Q ss_pred CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 169 THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 169 t~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
.+|.......+.+..+ .-.|+.++|+...++|+.-+
T Consensus 124 ~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 124 DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 2333334445555544 45799999999888877654
No 35
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=88.44 E-value=11 Score=32.19 Aligned_cols=59 Identities=10% Similarity=-0.055 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
+.++.++....+.|+|++++.++++++..+|.- .+=...+..+|-. .+....+...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 347888999999999999999999999887653 4445555555543 3445555555543
No 36
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.89 E-value=3.1 Score=36.51 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=51.4
Q ss_pred hhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHH
Q 024885 119 ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLA 198 (261)
Q Consensus 119 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~ia 198 (261)
....+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566678887754432 35789999999998853 43 234444555566666654 79999999999
Q ss_pred HHHHHHHH
Q 024885 199 KQAFDEAI 206 (261)
Q Consensus 199 k~afd~Ai 206 (261)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877554
No 37
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.62 E-value=1.5 Score=40.97 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+.|...|++++++.+..|+|.||..+...-|.+.-|.. .|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677788887777778999999999999998887766 69999999999999776544
No 38
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=87.47 E-value=13 Score=31.79 Aligned_cols=189 Identities=11% Similarity=0.032 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHH---
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNA--- 82 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~---eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~--- 82 (261)
.+..++....+.|+|++++.++++++...|.-.. .=...+..+|-. .+....+...+.....-....+.+...
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567888888999999999999999987665322 122234444332 233444444443211111101111100
Q ss_pred --HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhh-------ccc---chhHHHHHH
Q 024885 83 --KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAE-------FKF---GDEKKEAAA 149 (261)
Q Consensus 83 --~~i~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~~~~~~~ 149 (261)
....-|. ..=-++-...+...+.+.... .+....+..+-..|..|...-. ... .++.....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 0000010 000123334444555544332 1222223333334444443333 111 123344577
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
.|...|++|+.++.. + +.+|.......|.+..++ .+|+.++|+...++|+.-+-
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 899999999999864 3 234444445555555555 47999999999888876644
No 39
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=87.39 E-value=14 Score=32.05 Aligned_cols=178 Identities=11% Similarity=0.028 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH----
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELT-----VEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV---- 80 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls-----~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~---- 80 (261)
+..++.+....|+|++++.+++++++....+. ..=...+..+|- ..+....+...+..........++..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 167 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGR 167 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 55778888889999999999998876421111 111223333332 22334444444432221111011110
Q ss_pred -HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccc
Q 024885 81 -NAKRIKEYRQK-V-----------------ESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFG 141 (261)
Q Consensus 81 -~~~~i~~yk~k-i-----------------~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~ 141 (261)
......-|... - -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~---- 238 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD---- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC----
Confidence 00111111111 0 133344555555554432 1223333444445655544322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 142 DEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 142 ~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
.+.|...|++|+.++.. .+ ++.....+++.-...|-..|+.++|+...++++..+-
T Consensus 239 ------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ------FQAAIEHHQERLRIARE-FG--DRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ------HHHHHHHHHHHHHHHHH-HT--CHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHHh-cC--CcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34688888888888754 21 3333333443334444557888888888887776554
No 40
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=87.19 E-value=15 Score=32.22 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 35678888888755 34444 33444444444 57999999988888764
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.10 E-value=1.8 Score=32.32 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
-+.|..+|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.-.
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 36799999999865 45554 345677777776 799999999988887643
No 42
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.74 E-value=19 Score=32.98 Aligned_cols=47 Identities=9% Similarity=0.107 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|...|++++++ .|.+| ....+.+.. |...|+.++|+...+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 45788888888765 25555 233333333 4458999999988777665
No 43
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=86.46 E-value=10 Score=29.81 Aligned_cols=59 Identities=8% Similarity=0.059 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.|+|++++.++++++...+.. ..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSA-ATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 345567777778888888888888887765542 3333334444332 2334444444443
No 44
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.16 E-value=18 Score=32.12 Aligned_cols=171 Identities=9% Similarity=-0.050 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKE 87 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~~~i~~ 87 (261)
-+..++.+..+.|+|++++.++++++...|.-. +-...+..+|- ..+....+...+........ .+.. ......-
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~ 381 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAY-RENKFDDCETLFSEAKRKFP--EAPEVPNFFAEI 381 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTT-TTTCHHHHHHHHHHHHHHST--TCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcc--cCHHHHHHHHHH
Confidence 345677788888888888888888887766633 22333333332 23444555555544332211 1111 1111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 024885 88 YR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (261)
Q Consensus 88 yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 166 (261)
|. ..--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+
T Consensus 382 ~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~----- 444 (514)
T 2gw1_A 382 LTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL----- 444 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----
T ss_pred HHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----
Confidence 10 000112222333333322 221111111112222333332200 012 145788888888765
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 445 ~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 445 DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 34444 33344444444 579999999888777653
No 45
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.02 E-value=17 Score=31.71 Aligned_cols=54 Identities=7% Similarity=0.161 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
-+.|...|++|+++++.. .+|.......|.+..++ -+|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLC-KAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
Confidence 367999999999998754 34555445555665555 4799999999888776643
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.92 E-value=17 Score=31.76 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHHHH
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEY 88 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~~~i~~y 88 (261)
...+|.+..+.|+|++++.++.+++...|. +..-...+..+|-. .+....+...+........ .+.. ......-|
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~ 221 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKISTLY 221 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHH
Confidence 345577788899999999999999987665 34445555555533 3444455555544332211 1111 11111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHh--------hcccccchhhcccchhHHHHHHHHHHHHHHH
Q 024885 89 RQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKM--------KGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (261)
Q Consensus 89 k~ki~~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 158 (261)
... .--.+.+..++..+ -|. +......+..+ .|+.|.- .+ -.+.|...|++|
T Consensus 222 ~~~------g~~~~A~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 222 YQL------GDHELSLSEVRECLKLDQD--HKRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESV 283 (450)
T ss_dssp HHT------TCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHH
T ss_pred HHc------CCHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHH
Confidence 110 01112222222222 231 11111111111 1222211 11 145788888888
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.+ .|.+|....-++..-...|.-.|+.++|+...++++.
T Consensus 284 l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 753 4667765444444444455568999999999888764
No 47
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=85.47 E-value=15 Score=30.58 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35678888888765 34444 34555555554 47999998887777653
No 48
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.16 E-value=13 Score=29.68 Aligned_cols=165 Identities=9% Similarity=0.019 Sum_probs=84.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~~~i~ 86 (261)
+-+..++.+..+.|+|++++.++++++..+|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~ 113 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDS--RNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCc--CcHHHHHHHHH
Confidence 345678888889999999999999999876653 3444445555433 3445555555544332211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 024885 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (261)
Q Consensus 87 ~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 166 (261)
-|.. ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|++|+..
T Consensus 114 ~~~~------~g~~~~A~~~~~~~~~-~~~~~~-~~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~----- 170 (252)
T 2ho1_A 114 FLYE------QKRYEEAYQRLLEASQ-DTLYPE-RSRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRL----- 170 (252)
T ss_dssp HHHH------TTCHHHHHHHHHHHTT-CTTCTT-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHH------HhHHHHHHHHHHHHHh-CccCcc-cHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhc-----
Confidence 1111 1112344445544442 111222 222223345544322 11 35677888887754
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.|.+| ....+.+..++ ..|+.++|+...++++.
T Consensus 171 ~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 171 NRNQP---SVALEMADLLY-KEREYVPARQYYDLFAQ 203 (252)
T ss_dssp CSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 23333 23344444444 46888888887777653
No 49
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=84.66 E-value=15 Score=29.99 Aligned_cols=64 Identities=13% Similarity=0.032 Sum_probs=45.6
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024885 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELT--VEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (261)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls--~eERnLls~ayKn~i~~~R~s~R~l~~~e~ 71 (261)
-+.+..+|...-+.|+|++++..+++++...|.-. .+=...+..+|-. .+....|...+..+..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 45678899999999999999999999998876543 4444455555533 4556666666665443
No 50
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=84.05 E-value=25 Score=32.09 Aligned_cols=55 Identities=7% Similarity=0.008 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.+.|.+.|++++++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999988753 2 3466553334443344455589999999998888754
No 51
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.00 E-value=21 Score=31.15 Aligned_cols=184 Identities=11% Similarity=0.040 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHH
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE-----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKR 84 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eE-----RnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~ 84 (261)
+..++++..+.|+|++++++++++....+.++... ++++...+. ..+..-.+...+..........++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 67889999999999999999999887666665432 222222221 111222222222211111110111100011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 024885 85 IKEYRQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAA 162 (261)
Q Consensus 85 i~~yk~ki~~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a 162 (261)
+....-++-.+.- -..+.+.++...+ .+...+....+-++-..|..|.-+-. .++|...|++|..++
T Consensus 137 ~~~~la~~~~~~g-~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 137 LSIKLATLHYQKK-QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRN----------LAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCc----------HHHHHHHHHHHHHHh
Confidence 1111111111110 1122222322221 11222333444444455555532211 357899999999998
Q ss_pred hhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 163 EADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 163 ~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
.. .+ ..|.-.|...+...-+|...++..+|+..-.++|...-.
T Consensus 206 ~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 206 NS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred hc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 53 44 233444666666677777789999999988888876543
No 52
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=83.92 E-value=19 Score=30.47 Aligned_cols=58 Identities=10% Similarity=-0.052 Sum_probs=40.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
+.+..++.+..+.|+|++++.+++++++.+|.. ..=...+..+|.. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-MEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 357789999999999999999999999887653 4444555555433 233444444443
No 53
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=82.86 E-value=21 Score=30.35 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=40.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.|+|++++.+++++++.+|.. ..-...+..+|.. .+....+...+..
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 345678889999999999999999999887654 3444555555543 3444455555543
No 54
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.34 E-value=15 Score=28.28 Aligned_cols=167 Identities=10% Similarity=-0.023 Sum_probs=85.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~~~i~ 86 (261)
.-+..++.+..+.|+|++++.++++++...|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~ 84 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKP--DSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCC--CChHHHHHHHH
Confidence 345677888899999999999999999877654 3444445555432 3445555555544332211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 024885 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (261)
Q Consensus 87 ~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 166 (261)
-|... ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|+++++.
T Consensus 85 ~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~----- 142 (225)
T 2vq2_A 85 FLCGR-----LNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA----- 142 (225)
T ss_dssp HHHTT-----TCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHHh-----cCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----
Confidence 11110 0011223333333332 111121 222233455555332 11 35678888888754
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 ~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 23443 23344444444 479999999988887653
No 55
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=82.33 E-value=8 Score=32.61 Aligned_cols=90 Identities=10% Similarity=0.001 Sum_probs=52.3
Q ss_pred HHHHHHHhhcCCCCCCChhH--HHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH-Hhh
Q 024885 102 DIMTVIDEHLIPSASAGEST--VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG-LAL 178 (261)
Q Consensus 102 eii~lId~~Lip~~~~~esk--vfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg-LaL 178 (261)
+++.+++..+-.....++.+ +.|++..|.+|... ++ .+.|...|++|+.+.. +..++.... +..
T Consensus 93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 93 EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQL---TGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHH
T ss_pred HHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHH
Confidence 45555555443322333333 44555566665221 11 3578999999998542 223333333 344
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 179 NFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 179 N~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
|.+++|+. +|+.++|+..-++|++.+
T Consensus 160 ~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 160 AIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 55555554 799999999999988644
No 56
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=82.21 E-value=18 Score=29.05 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
-+..++.+..+.|+|++++..+.+++..+|.. .+=...+..+|-. .+....+...+.
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45667777778888888888888888776654 3444444444432 333444444443
No 57
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=81.80 E-value=22 Score=29.97 Aligned_cols=52 Identities=10% Similarity=-0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|..+|++|+++... .. +|... ....|.+.++.. +|+.++|+...+++..
T Consensus 134 ~~~A~~~~~~Al~~~~~-~~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQ-DQ--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CC--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 36799999999998753 11 23332 345566666665 6999999987776654
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=81.80 E-value=43 Score=33.16 Aligned_cols=166 Identities=12% Similarity=0.107 Sum_probs=86.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH-HhhhhhhhCchH-HHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS-IEQKEEAKGNEV-NAKRI 85 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~-~e~k~~~~~~~~-~~~~i 85 (261)
+-+..++.+..+.|+|++++.+.+++++.+|+.. +=.+-|..+|.. .+..-.|...+.. ++-+.. ... ...+-
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~-~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~---~~~a~~nLg 84 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA-AAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT---FADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT---CHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC---CHHHHHHHH
Confidence 4567889999999999999999999999988753 344555555543 2333344443332 111110 110 11110
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 024885 86 KEYR--QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (261)
Q Consensus 86 ~~yk--~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (261)
.-|. .+. ++=...++..++ +-|.. ..+++ ..|..|+-+ |. .+.|..+|++|+++
T Consensus 85 ~~l~~~g~~-~~A~~~~~kAl~-----l~P~~----~~a~~--~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l-- 140 (723)
T 4gyw_A 85 NTLKEMQDV-QGALQCYTRAIQ-----INPAF----ADAHS--NLASIHKDS-----GN-----IPEAIASYRTALKL-- 140 (723)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHH-----HCTTC----HHHHH--HHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHcCCH-HHHHHHHHHHHH-----hCCCC----HHHHH--HHHHHHHHc-----CC-----HHHHHHHHHHHHHh--
Confidence 0010 011 111112222222 12321 12222 234433322 11 45789999999865
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024885 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (261)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 209 (261)
.|.+|- ...|.+.. |..+++.++|++..+++++-.-..+
T Consensus 141 ---~P~~~~---a~~~L~~~-l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ---KPDFPD---AYCNLAHC-LQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ---CSCCHH---HHHHHHHH-HHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ---CCCChH---HHhhhhhH-HHhcccHHHHHHHHHHHHHhChhHH
Confidence 355543 33444443 4457999999988888877655544
No 59
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=81.09 E-value=2.3 Score=32.50 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhhcC---CCC-------CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADL---PPT-------HPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L---~pt-------~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999999864321 233 67777888888888776 6999999998888754
No 60
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=81.05 E-value=17 Score=29.23 Aligned_cols=59 Identities=10% Similarity=0.091 Sum_probs=31.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
+.++.+|.+..+.|+|++++.+++++++.+|.-. +-...+..+|-. .+....|...+..
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~-~~~~~~A~~~~~~ 62 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAVCYYE-LAKYDLAQKDIET 62 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 3456677777777777777777777776655422 223334443322 2333444444433
No 61
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=81.03 E-value=22 Score=29.41 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=86.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHHHHH
Q 024885 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEYR 89 (261)
Q Consensus 11 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~-~~~~i~~yk 89 (261)
..+|.+..+.|+|++++.++++++...|. +.+-...+..+|-. .+....+...+........ .+.. ......-|.
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44588899999999999999999987664 34445555555543 3555566666654332221 1111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhh--------cccccchhhcccchhHHHHHHHHHHHHHHHHHH
Q 024885 90 QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMK--------GDYYRYLAEFKFGDEKKEAAANSMKAYETATTA 161 (261)
Q Consensus 90 ~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~ 161 (261)
. . .--.+.+..+...+--...+.....+|.++. |..+. ..+ -.+.|...|+++++.
T Consensus 200 ~-----~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 200 Q-----L-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESVMKT 263 (359)
T ss_dssp H-----H-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHHHHH
T ss_pred H-----c-CCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHHHhc
Confidence 0 0 1111222333222211112223333332221 22221 111 135688888888754
Q ss_pred HhhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 162 AEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 162 a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
. |.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3 4565443 344555555554 79999999998888763
No 62
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=80.75 E-value=22 Score=29.18 Aligned_cols=56 Identities=14% Similarity=-0.072 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTH-PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~-PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.+.|...|++|+.+....-.+.+ |....+..+.+..++ ..|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35789999999998854333222 333344556666555 479999999988887654
No 63
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=80.16 E-value=25 Score=29.90 Aligned_cols=52 Identities=6% Similarity=-0.038 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
-+.|...|++|+.+... .+. +| ..+.++.-....|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 35799999999999864 222 22 333333333445556799999988777654
No 64
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=79.98 E-value=23 Score=28.98 Aligned_cols=44 Identities=18% Similarity=0.039 Sum_probs=25.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ay 52 (261)
+.++.+|....+.|+|++++.++++++...|. +..-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34566666666777777777777776665554 333333444443
No 65
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=79.59 E-value=34 Score=30.57 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhh--cCCCCCcc---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 150 NSMKAYETATTAAEA--DLPPTHPI---RLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 150 ~A~~aY~~A~~~a~~--~L~pt~Pi---rLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555555432 45566653 2455565555666678999999998888765
No 66
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=78.79 E-value=6.1 Score=29.32 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|.++|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5788999999854 34454 455666666665 6999999988777754
No 67
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=77.79 E-value=13 Score=25.87 Aligned_cols=53 Identities=9% Similarity=0.056 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 578999999998875 3455555555566777776665 7999999887766665
No 68
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=77.29 E-value=24 Score=27.60 Aligned_cols=59 Identities=5% Similarity=-0.071 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~ 69 (261)
.+..++....+.|+|++++.++++++..+|.- .+-...+..+|- ..+....+...+...
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKED-AIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTC-HHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 45667888888999999999999999866653 444444454443 244555566665543
No 69
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.20 E-value=28 Score=28.28 Aligned_cols=181 Identities=14% Similarity=0.095 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hCc
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLD-------VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KGN 78 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~-------~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~-~~--~~~ 78 (261)
-+..++.+....|+|++++.++++++... .+....-...+..+|- ..+....+...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35578888888999999999999988642 1122222333333332 2344444555544322211 00 001
Q ss_pred hHHHH----HHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHH
Q 024885 79 EVNAK----RIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMK 153 (261)
Q Consensus 79 ~~~~~----~i~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~ 153 (261)
+.... ...-|. ..=-++-.......+.+.....-+ +....+..+...|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP---DDPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT---TCHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 11110 000010 000123334445555554443222 122233333344555533211 356888
Q ss_pred HHHHHHHHHhh-----------------------------------------cCCCCCcchHHHhhhHHHHHHHHhCChH
Q 024885 154 AYETATTAAEA-----------------------------------------DLPPTHPIRLGLALNFSVFYYEIMNSPE 192 (261)
Q Consensus 154 aY~~A~~~a~~-----------------------------------------~L~pt~PirLgLaLN~SVF~yEi~~~~~ 192 (261)
.|++|++++.. .....+|....+..+.+..|+. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888877532 1122456666666666666655 69999
Q ss_pred HHHHHHHHHHHH
Q 024885 193 RACHLAKQAFDE 204 (261)
Q Consensus 193 ~A~~iak~afd~ 204 (261)
+|+...++|+.-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887754
No 70
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=76.99 E-value=11 Score=29.31 Aligned_cols=86 Identities=21% Similarity=0.099 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH--hh--hhhhhCchHHHHHHHHHHHHHH
Q 024885 21 ERYDEMVDAMKNVA---KLDVELTVEERNLLSVGYKNVIGARRASWRILSSI--EQ--KEEAKGNEVNAKRIKEYRQKVE 93 (261)
Q Consensus 21 eRy~Dm~~~mk~~i---~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~--e~--k~~~~~~~~~~~~i~~yk~ki~ 93 (261)
.|.+..++.+|.-+ -++++||.|-|.=|.--.|...-.-|-|+|-+..- .. +....+ .+-++-..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 46677788887655 35899999999999998888888888888877421 10 000001 01133344555
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 024885 94 SELSDICNDIMTVIDEHL 111 (261)
Q Consensus 94 ~EL~~~C~eii~lId~~L 111 (261)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666544
No 71
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=76.75 E-value=25 Score=27.60 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRIL 66 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l 66 (261)
+.+..++.+..+.|+|++++.+++++++.+ -+..=...+..+|-. .+....+...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 456778888888999999999999988776 334444455555432 23333444444
No 72
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=76.37 E-value=18 Score=25.79 Aligned_cols=56 Identities=13% Similarity=0.155 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 207 (261)
+.|...|++|+.++.. .+ .+|.......|.+..++ ..|+.++|+...+++++-+..
T Consensus 66 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHH
Confidence 5789999999999864 22 23333444555555555 479999999999998876543
No 73
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=74.88 E-value=8.7 Score=28.37 Aligned_cols=52 Identities=10% Similarity=0.042 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
+.|.+.|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 578999999999975 35555554333445555554 45799999998655554
No 74
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=74.01 E-value=7.1 Score=34.73 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhh-cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEA-DLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~-~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|.++|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 5799999999999864 3345678777777788877776 7999999877666543
No 75
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=72.68 E-value=12 Score=25.61 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5788899999865 34454 345566666655 799999988776665
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=72.45 E-value=33 Score=26.90 Aligned_cols=32 Identities=3% Similarity=0.088 Sum_probs=27.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
.-+..++.+..+.|+|++++.++++++...+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 34567888899999999999999999987665
No 77
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.93 E-value=30 Score=26.26 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=49.1
Q ss_pred hHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024885 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (261)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak 199 (261)
..+..+-..|..|...-+ .+.|...|++|+.+++ ..+. +|...+.+++.-...|-.+|++++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLPE-DPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSCC-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcCc-cHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 344444556666654432 3578999999999996 3443 454455544444444555899999999999
Q ss_pred HHHHHHH
Q 024885 200 QAFDEAI 206 (261)
Q Consensus 200 ~afd~Ai 206 (261)
+|+.-+-
T Consensus 132 ~al~~~~ 138 (203)
T 3gw4_A 132 KSLVYAQ 138 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887643
No 78
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=71.64 E-value=19 Score=27.11 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4566666666654 23443 344555555554 6888888776666654
No 79
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=71.61 E-value=37 Score=27.10 Aligned_cols=45 Identities=13% Similarity=0.145 Sum_probs=33.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYK 53 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayK 53 (261)
+-+..++.+..+.|+|++++..+++++..+|.. .+=...+..+|.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 84 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHH
Confidence 345678899999999999999999999988774 333444444443
No 80
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=71.20 E-value=25 Score=24.96 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4577788887754 34443 334455554444 688888888777776654
No 81
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=71.05 E-value=16 Score=23.92 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688889998865 34443 344566665554 7999999988777765
No 82
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=70.22 E-value=15 Score=26.23 Aligned_cols=47 Identities=15% Similarity=0.281 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788889888755 3445 3456667776665 79999999988887754
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=70.12 E-value=33 Score=25.90 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888765 34444 445566666655 6999998887666654
No 84
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=68.01 E-value=19 Score=24.13 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.++ ....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688888888765 23333 345666766665 6999999887777654
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=67.74 E-value=24 Score=24.79 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+...++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888753 46776655666666666664 7999999887766654
No 86
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.66 E-value=15 Score=26.42 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+. +.|.+|....+..+.+..++. +++.++|+...++++..
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 456667776653 445555555666666666554 58888887777776543
No 87
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=66.58 E-value=46 Score=26.27 Aligned_cols=61 Identities=7% Similarity=-0.076 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e 70 (261)
.-+..++.+..+.|+|++++.++++++..+|.- ..-...+..+|-. .+....+.+.+....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRN-ARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 345678889999999999999999999877653 4444445555433 455566666665543
No 88
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=66.41 E-value=30 Score=24.02 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=41.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
.-+..++.+..+.|+|++++.+++++++.+|.... =...+..+|.. .+..-.+...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34667899999999999999999999998887544 44556666543 344444444443
No 89
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=66.11 E-value=23 Score=23.88 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888887754 3445421 45666666665 6999999887777664
No 90
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=65.85 E-value=22 Score=28.64 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLG-----LALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLg-----LaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
-+.|..+|++|+++.-. .|+..++.+. +-.|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 45799999999998743 3333344333 66666666555 7999999988777765
No 91
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=64.42 E-value=33 Score=23.91 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=41.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.|+|++++.++++++..+|.. .+=...+..+|.. .+....+...+..
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678889999999999999999999887764 3445556666654 3455555555544
No 92
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=64.07 E-value=62 Score=26.88 Aligned_cols=189 Identities=13% Similarity=0.009 Sum_probs=98.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHH-----HHHHhhhhhhhHHHHHHHHHHh-hhhhhhCchH
Q 024885 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLL-----SVGYKNVIGARRASWRILSSIE-QKEEAKGNEV 80 (261)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLl-----s~ayKn~i~~~R~s~R~l~~~e-~k~~~~~~~~ 80 (261)
-+.+...+...-..|+|++++.++++.++..+........+. ...| ...+....|...+.... .... ..+..
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~~~-~~~~~ 152 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYV-LKKVDYEYCILELKKLLNQQLT-GIDVY 152 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH-HTSSCHHHHHHHHHHHHTTCCC-SSCTT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHhc-CCchH
Confidence 367888899999999999999999999887666665433222 2222 12223445555543321 1111 01111
Q ss_pred -HH----HHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHH
Q 024885 81 -NA----KRIKEYRQ-KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKA 154 (261)
Q Consensus 81 -~~----~~i~~yk~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~a 154 (261)
.. ..-.-|.. .=-++-....+..+.+.+. .|. +....+..+-..|..|..+-+ -+.|...
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~ 218 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQ 218 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHH
Confidence 00 11111111 1112334555566655543 231 122121222334555542222 3679999
Q ss_pred HHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHH-HHHHHHHHHHHHhhcccCccchH
Q 024885 155 YETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERAC-HLAKQAFDEAISELDTLNEESYK 218 (261)
Q Consensus 155 Y~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~-~iak~afd~Ai~~ld~l~ee~~~ 218 (261)
|++|++++.. ..++..++.+++.--..|.-+|+.++|+ ...++ |+.-.+.+....++
T Consensus 219 ~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~----Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 219 VNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK----ASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH----HHHHHHHTTCHHHH
T ss_pred HHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH----HHHHHHHhCcHhhH
Confidence 9999999853 2344455655555555566689999994 43444 44444445555553
No 93
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=63.34 E-value=50 Score=25.53 Aligned_cols=31 Identities=6% Similarity=0.004 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
.+..++....+.|+|++++.++++++...+.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 4567788888899999999999999876443
No 94
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=62.92 E-value=35 Score=23.63 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLr 228 (261)
+.|...|++|+++ .|.+|. ...+.+..|+ .+|+.++|+...++|+.-+-..- ...-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~------~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEG------TQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHS------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCC------chhHHHHHHHHHH
Confidence 5788889888865 344443 4455555554 47999999998888877654321 1233455566666
Q ss_pred hhHhhhc
Q 024885 229 DNLTLWT 235 (261)
Q Consensus 229 dNl~~W~ 235 (261)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5555554
No 95
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.77 E-value=25 Score=24.96 Aligned_cols=47 Identities=19% Similarity=0.151 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.-
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 5688889988865 34444 455566666655 79999999988887653
No 96
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=62.55 E-value=62 Score=26.33 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
-+..++.+..+.|+|++++.+++++++.+|..
T Consensus 57 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 88 (327)
T 3cv0_A 57 AWRSLGLTQAENEKDGLAIIALNHARMLDPKD 88 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC
Confidence 45677888999999999999999999876653
No 97
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=62.09 E-value=25 Score=25.83 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5788999999865 44454 344555555554 7999999876666553
No 98
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=61.66 E-value=20 Score=30.56 Aligned_cols=73 Identities=15% Similarity=0.087 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|....|...-.-|.++|.+..--...- +.-.+...+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000001133445566677777777777776654
No 99
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=60.51 E-value=30 Score=24.04 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5688888888865 33343 34455665555 47999999888777664
No 100
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=60.05 E-value=47 Score=24.21 Aligned_cols=57 Identities=21% Similarity=0.196 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
+..++.+..+.|+|++++..+++++...|.- ..-...+..+|- ..+....+...+..
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADAFD-VDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-hHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 4467888888999999999999988765543 333333444432 23444445555543
No 101
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.87 E-value=12 Score=26.78 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
-+++++.++.+.|+|++++.+.+++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4566777777777777777777777776666
No 102
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=59.35 E-value=59 Score=25.77 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 35678888888765 34443 233444444444 79999998888887753
No 103
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=59.33 E-value=20 Score=20.79 Aligned_cols=26 Identities=27% Similarity=0.611 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024885 83 KRIKEYRQKVESELSDICNDIMTVID 108 (261)
Q Consensus 83 ~~i~~yk~ki~~EL~~~C~eii~lId 108 (261)
+.++.||.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999998877653
No 104
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=58.93 E-value=54 Score=24.46 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
.+..++.+..+.|+|++++.++.+++..+|.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 43 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA 43 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc
Confidence 3445555555566666666666666655443
No 105
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=58.47 E-value=28 Score=26.30 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5788999998865 35554 233444444443 6888888887777643
No 106
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=58.43 E-value=67 Score=25.44 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.|...|++++..... ..|....+.++.+..++. +|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 455555555433321 122223445555555554 6999999987777653
No 107
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=57.65 E-value=53 Score=24.00 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 205 (261)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5789999999765 456663 34566665554 799999998877776544
No 108
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=57.53 E-value=90 Score=26.60 Aligned_cols=32 Identities=6% Similarity=0.310 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
-+..++.+..+.|+|++++.++++++..+|+.
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 35566677777777777777777777666554
No 109
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=56.66 E-value=44 Score=23.26 Aligned_cols=49 Identities=10% Similarity=-0.064 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
+.|...|++|+.+ .|.+| ....+.+..+.. +|+.++|+...++++...-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688889998865 34443 234555555554 7999999998888776543
No 110
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=56.01 E-value=30 Score=28.82 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|....|...-..|.++|.+..--...- +...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888742111000 000000001234445566667777666666666544
No 111
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=55.74 E-value=1.1e+02 Score=27.26 Aligned_cols=59 Identities=10% Similarity=0.180 Sum_probs=39.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhh-hHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGA-RRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~-~R~s~R~l~~ 68 (261)
+-+.+++.+..+.|+|++++....+++..+|.. .+=.+.+..+|... +. ...+...+..
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~~ 157 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYITA 157 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHHH
Confidence 445678888888999999999999999988874 33344444444433 32 4455555543
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=55.66 E-value=33 Score=28.82 Aligned_cols=53 Identities=8% Similarity=-0.051 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5799999999999853 32 55555666665566666789999999988888654
No 113
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=55.57 E-value=31 Score=25.94 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
...+|++..+.|+|+.++.+++++++.+|.-
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4578999999999999999999999988764
No 114
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=55.19 E-value=77 Score=25.14 Aligned_cols=62 Identities=6% Similarity=-0.011 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~--Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e 70 (261)
+.+..+|...-+.|+|++++..+++++...|. +..+-...+..+|-. .+....|...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 35567888899999999999999999987654 334445555555432 455566666665544
No 115
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=54.77 E-value=33 Score=25.84 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5789999999765 456653 34666666665 79999998766665543
No 116
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=54.73 E-value=37 Score=22.79 Aligned_cols=45 Identities=9% Similarity=-0.052 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5678888888765 34444 34456665554 4799999988766654
No 117
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=54.56 E-value=53 Score=23.07 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.|+|++++.+++++++.+|.. .+=...+..+|-. .+....+...+..
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678889999999999999999999988775 4445556666544 3555666666554
No 118
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=54.42 E-value=44 Score=22.76 Aligned_cols=16 Identities=13% Similarity=0.065 Sum_probs=9.3
Q ss_pred hCChHHHHHHHHHHHH
Q 024885 188 MNSPERACHLAKQAFD 203 (261)
Q Consensus 188 ~~~~~~A~~iak~afd 203 (261)
.|+.++|+...++++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 4666666665555544
No 119
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=54.09 E-value=45 Score=22.71 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 23455555554 479999999887776653
No 120
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=54.03 E-value=31 Score=28.68 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|....|...-..|.++|.+..--...- +...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888742110000 000000001134445566666666666666666544
No 121
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=54.00 E-value=46 Score=22.23 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 344555555554 79999999988887654
No 122
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=53.96 E-value=98 Score=25.98 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
.+.|..+|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 36799999999999864 2 23333 3345566666665 79999999988887664
No 123
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=52.71 E-value=13 Score=33.34 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEAD--------LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~--------L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +++.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888888888765431 011467777788888887775 6899999888887764
No 124
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=52.70 E-value=31 Score=28.69 Aligned_cols=73 Identities=16% Similarity=0.162 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|....|...-..|.++|.+..--...- +...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000011244455666777777777777776554
No 125
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=52.66 E-value=43 Score=24.27 Aligned_cols=47 Identities=4% Similarity=-0.178 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 5688888888865 24443 344555555554 79999999888877653
No 126
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=52.43 E-value=1.1e+02 Score=26.04 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=32.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ay 52 (261)
.-+..++.+..+.++++....+.+.++..+|.. .+-...+..+|
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~-~~~~~~lg~~~ 77 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLL-AEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHH
Confidence 345677888889999999999999988876653 44455555554
No 127
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=52.34 E-value=33 Score=28.54 Aligned_cols=69 Identities=19% Similarity=0.132 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~----k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|....|...-..|.++|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888742110 000000 01134445566666666666666666544
No 128
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=52.15 E-value=1.3e+02 Score=26.86 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKN 54 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn 54 (261)
+..++.+..+.|+|++++.++.+++..+|. +..=.+-+..+|..
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 345666666667777777777777766655 23334444444444
No 129
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.11 E-value=46 Score=23.54 Aligned_cols=46 Identities=7% Similarity=-0.076 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888765 34443 344556665554 7999999887776654
No 130
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=51.73 E-value=44 Score=25.05 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|.+.|++|+++ .|.||. ...+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788888888755 455542 3344444444 47999999887766654
No 131
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=51.24 E-value=35 Score=28.37 Aligned_cols=69 Identities=22% Similarity=0.198 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 38 ~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~----k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
|+||.|-|.=|..-.|...-..|.++|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999888888888888742110 100000 01133444556666666666666666544
No 132
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=50.89 E-value=69 Score=23.32 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
.+..++....+.|+|++++.++++++..+|.
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCCc
Confidence 3445666666667777777777776665553
No 133
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=50.39 E-value=67 Score=26.62 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=46.4
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024885 37 DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (261)
Q Consensus 37 ~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lId~~L 111 (261)
-|+||.|-|.=|....|...-..|.++|.+..--...-.+.. +.-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999888888888887431111100100 01244555666777777777777776654
No 134
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.68 E-value=40 Score=26.00 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35799999999855 456663 34566666554 7999999886666554
No 135
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=49.62 E-value=57 Score=21.95 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4566777776644 22332 233344444443 5777777777666654
No 136
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=48.49 E-value=56 Score=21.59 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=17.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 11 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
..++.+..+.|+|++++.+++++++..|.
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 38 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPE 38 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcC
Confidence 34555555666666666666666655443
No 137
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=48.40 E-value=52 Score=31.28 Aligned_cols=47 Identities=21% Similarity=0.337 Sum_probs=31.0
Q ss_pred hcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhH------HHHHHH
Q 024885 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNF------SVFYYE 186 (261)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~------SVF~yE 186 (261)
-||..||...+ ..|...|.+|..+.=.+ ...-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~--G~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSN--GQPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTB--SHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCC--CchHHHHHHHHhcccccHHHHHHHH
Confidence 79999999764 57999999998664111 1111466665554 577763
No 138
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=46.50 E-value=64 Score=21.66 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4678888888754 33443 334556666654 7999999887777664
No 139
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=46.43 E-value=31 Score=31.53 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhhcCCC--------CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPP--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~p--------t~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +++.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5788889888876532 110 234667788888888776 6899999888887743
No 140
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=46.33 E-value=56 Score=25.11 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|...|++|+.+. |.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~~-----~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINRD-----KHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----ccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 57888999998652 3443 445666666665 7999999998888877
No 141
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=45.78 E-value=55 Score=25.82 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=27.2
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024885 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (261)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 38 (261)
-+.++..+...-+.|+|++++.++.+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35678888888899999999999999987655
No 142
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.68 E-value=1.3e+02 Score=25.05 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|...|++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.+++.+
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 467899999997532 3565433 3456777777766 6999999877666553
No 143
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=45.27 E-value=1e+02 Score=23.57 Aligned_cols=44 Identities=16% Similarity=0.018 Sum_probs=30.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ay 52 (261)
+-+..++.+..+.|+|++++.++++++..+|. +.+=...|..+|
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~ 80 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 45667777788888888888888888877664 344444555554
No 144
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=45.11 E-value=78 Score=22.27 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
..|..-|++|+......- ...+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 467888888887764221 112334444555555555 57999999998888764
No 145
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=45.04 E-value=40 Score=27.10 Aligned_cols=78 Identities=8% Similarity=0.022 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHh--hcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHH
Q 024885 149 ANSMKAYETATTAAE--ADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQ 225 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~--~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~Ilq 225 (261)
+.|..+|.+|+++-. -.+.|.++--+ .-..|-++-++ -+|+.++|+.--++|+.-. .-+-..+++...+.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~-----p~d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVEMI-----EERKGETPGKERMME 147 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH-----HHCCSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHhcC-----CCcHHHHHHHHHHHH
Confidence 468888999988732 24566554211 00123333333 4899999987555554432 123334555666666
Q ss_pred HHHhhHh
Q 024885 226 LLRDNLT 232 (261)
Q Consensus 226 LLrdNl~ 232 (261)
.+.+.+.
T Consensus 148 ~~~~~~~ 154 (159)
T 2hr2_A 148 VAIDRIA 154 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555443
No 146
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=44.80 E-value=67 Score=21.84 Aligned_cols=41 Identities=7% Similarity=0.073 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVG 51 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~a 51 (261)
-+..++.+..+.|+|++++.++++++...+ +.+-+..+..+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~l~~~ 121 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHR--TPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CHHHHHHHHHH
Confidence 355778888899999999999999988765 34444444433
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=42.90 E-value=49 Score=30.53 Aligned_cols=24 Identities=4% Similarity=-0.137 Sum_probs=11.3
Q ss_pred hhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 178 LNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 178 LN~SVF~yEi~~~~~~A~~iak~af 202 (261)
.|.+..|+. +|+.++|+...++|+
T Consensus 78 ~~lg~~~~~-~g~~~eA~~~~~~al 101 (477)
T 1wao_1 78 YRRAASNMA-LGKFRAALRDYETVV 101 (477)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 333333333 455555555544444
No 148
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=42.43 E-value=30 Score=31.70 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 209 (261)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45788888888632 23 2457888888999999999999999999999998754
No 149
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=42.18 E-value=78 Score=22.94 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 204 (261)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4677888887755 23343 33455555554 479999999988887654
No 150
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=41.53 E-value=1.1e+02 Score=23.03 Aligned_cols=62 Identities=8% Similarity=0.037 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~ 71 (261)
-+..++.+..+.|+|++++.++.+++...|.. ..-...+..+|-...+....+...+....+
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-AEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 45677888889999999999999999876653 444455555554432556666666655443
No 151
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=40.67 E-value=4.1e+02 Score=29.26 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.9
Q ss_pred hHHHHHHHHhCChHHHHHHHHHH
Q 024885 179 NFSVFYYEIMNSPERACHLAKQA 201 (261)
Q Consensus 179 N~SVF~yEi~~~~~~A~~iak~a 201 (261)
.-.+-+|+-.|..++||.+..+|
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 35567889999999999999998
No 152
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=40.66 E-value=56 Score=26.21 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=56.4
Q ss_pred hcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chHHHhhhHHHHH----HHHhCChHHHHHHHHH
Q 024885 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHP---IRLGLALNFSVFY----YEIMNSPERACHLAKQ 200 (261)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~P---irLgLaLN~SVF~----yEi~~~~~~A~~iak~ 200 (261)
.|..+.=+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4556655666667777777889999999999865 45555 3455555322221 111245566665
Q ss_pred HHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024885 201 AFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (261)
Q Consensus 201 afd~Ai~~ld~l~ee~~~ds~~IlqLLrdNl~~W~~ 236 (261)
+|+.|++ ++ .+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~-l~---P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVD-EQ---PD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH-HC---TT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHH-hC---CC-CHHHHHHHHHHHhCHhccCc
Confidence 5666654 22 21 23445557777888888764
No 153
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=39.23 E-value=2.2e+02 Score=25.75 Aligned_cols=161 Identities=14% Similarity=0.028 Sum_probs=75.6
Q ss_pred HhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh-HHHHHHHHHHhhhhhhhCchH-HHHHHHHHHHHHHHHH
Q 024885 19 QAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGAR-RASWRILSSIEQKEEAKGNEV-NAKRIKEYRQKVESEL 96 (261)
Q Consensus 19 q~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~-R~s~R~l~~~e~k~~~~~~~~-~~~~i~~yk~ki~~EL 96 (261)
..++++..+..+.++... .+-+.+-...+..+|-. .+.. ..|...+....+... .+.. ...+-.-|...
T Consensus 80 ~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~----- 150 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK----- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc-----
Confidence 345577777777776543 33455556666666543 3445 556555544222211 1111 11111111110
Q ss_pred HHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 024885 97 SDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGL 176 (261)
Q Consensus 97 ~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL 176 (261)
.--.+.+...+..|-- ++.. ..+...|..|+.+..- ...++..-.+.|...|++|+++ .|.+|. .
T Consensus 151 -g~~~~A~~~~~~al~~---~p~~--~~~~~lg~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~ 215 (474)
T 4abn_A 151 -GDVTSAHTCFSGALTH---CKNK--VSLQNLSMVLRQLQTD-SGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---S 215 (474)
T ss_dssp -TCHHHHHHHHHHHHTT---CCCH--HHHHHHHHHHTTCCCS-CHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---H
T ss_pred -CCHHHHHHHHHHHHhh---CCCH--HHHHHHHHHHHHhccC-ChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---H
Confidence 1112333444433321 1222 4445567777655221 1122333356889999998865 355542 2
Q ss_pred hhhHHHHHHHH---h----CChHHHHHHHHHHHH
Q 024885 177 ALNFSVFYYEI---M----NSPERACHLAKQAFD 203 (261)
Q Consensus 177 aLN~SVF~yEi---~----~~~~~A~~iak~afd 203 (261)
..|.+..|... . |+.++|+...++|+.
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 33344433321 1 567777666666554
No 154
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=39.17 E-value=49 Score=27.75 Aligned_cols=50 Identities=16% Similarity=0.090 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhh--cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 153 KAYETATTAAEA--DLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 153 ~aY~~A~~~a~~--~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
.-|++|....+. .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 345666655543 344444 344455555554 47888888888888776543
No 155
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=38.73 E-value=73 Score=24.11 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
-+..++.+..+.|+|++++..+.+++..+|..
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 44566777777788888888887777776654
No 156
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=38.64 E-value=1.8e+02 Score=24.55 Aligned_cols=111 Identities=19% Similarity=0.287 Sum_probs=59.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHH
Q 024885 13 VAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKV 92 (261)
Q Consensus 13 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki 92 (261)
.|+|.+....|--||+-+|.-.. +..|..|.=.-||=-+.. ++.+. +...++..=+..-.+-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsKLssA 161 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQKFKDA 161 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHHhhhH
Confidence 57777777777777777754221 123444444445443332 22211 1112222222222333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 024885 93 ESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEA 164 (261)
Q Consensus 93 ~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 164 (261)
+.--..+|-++|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 162 EtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 162 EAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 4455667777777665 4557888988886543 22334458888888854
No 157
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=38.55 E-value=1.1e+02 Score=21.93 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
.....++....+.|+|++++..+++++..+|. +.+=...+..+|-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35677888888999999999999999988776 35555666666543 344445555554
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=38.32 E-value=57 Score=21.00 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=40.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.++|++++.++++++...|.- ..=...+..+|-. .+....+...+..
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 345678888899999999999999999877653 3444455555543 3455556665554
No 159
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=37.69 E-value=1.2e+02 Score=22.16 Aligned_cols=78 Identities=9% Similarity=0.144 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhh---hhCchHHHHHHHHHHHHHHHHHHHH
Q 024885 23 YDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE---AKGNEVNAKRIKEYRQKVESELSDI 99 (261)
Q Consensus 23 y~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~e~k~~---~~~~~~~~~~i~~yk~ki~~EL~~~ 99 (261)
|...+.-+...+..-+.++-++|+-+.......+..-..=++.+. +|-+.- ..........++.||..+..+|..-
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~ 88 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIKRP 88 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555445688889999888887777776554444432 222221 1112245678889988887766543
Q ss_pred HH
Q 024885 100 CN 101 (261)
Q Consensus 100 C~ 101 (261)
-+
T Consensus 89 lk 90 (97)
T 3onj_A 89 LQ 90 (97)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 160
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=36.85 E-value=92 Score=20.73 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=28.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
+.+..++.+....|+|++++...++++..+|.-
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN 37 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 456778888889999999999999999887653
No 161
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=35.89 E-value=1.4e+02 Score=22.36 Aligned_cols=75 Identities=11% Similarity=-0.087 Sum_probs=49.3
Q ss_pred hHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024885 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (261)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak 199 (261)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 344444455655544322 35789999999999853 2 3455556555555555666899999998888
Q ss_pred HHHHHHHH
Q 024885 200 QAFDEAIS 207 (261)
Q Consensus 200 ~afd~Ai~ 207 (261)
+|++-+-.
T Consensus 172 ~al~~~~~ 179 (203)
T 3gw4_A 172 RARDIFAE 179 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87776543
No 162
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=33.85 E-value=63 Score=24.30 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHhhhh
Q 024885 21 ERYDEMVDAMKNVAKLD-VELTVEERNLLSVGYKNVI 56 (261)
Q Consensus 21 eRy~Dm~~~mk~~i~~~-~~Ls~eERnLls~ayKn~i 56 (261)
++|+.++..++.+-..+ ..++.+++-.|=--||...
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888888765432 3689999988888888864
No 163
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=32.78 E-value=1.6e+02 Score=22.31 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADL--------PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L--------~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~af 202 (261)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++++
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 3568889999886542100 00334455666777777665 699999988766654
No 164
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=32.68 E-value=1.9e+02 Score=23.06 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=45.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhh-------hhhhHHHHHHHHHHhh
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNV-------IGARRASWRILSSIEQ 71 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~--Ls~eERnLls~ayKn~-------i~~~R~s~R~l~~~e~ 71 (261)
+-+..++.+..+.|+|++++..+++++...|. ...+-...+..+|-.. .+....|...+..+..
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 125 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID 125 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence 34567889999999999999999999988664 3344455556665442 5666677777765443
No 165
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=32.46 E-value=92 Score=23.20 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSP--ERACHLAKQAFDE 204 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~--~~A~~iak~afd~ 204 (261)
+.|..+|++|+.+. |.+| .+..+++..+|.-.|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 57899999998764 3444 34556666656567887 9998887777653
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=32.18 E-value=3e+02 Score=25.17 Aligned_cols=32 Identities=9% Similarity=-0.067 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~ 39 (261)
+-+..++.+..+.|+|++++.+++++++.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34567788888889999999999999887665
No 167
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=32.11 E-value=1.4e+02 Score=24.92 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
-...+|.+..+.|||++++..+.+++..+|..
T Consensus 221 ~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 221 LATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 44567777778888888888888888777665
No 168
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=31.53 E-value=1.2e+02 Score=23.23 Aligned_cols=59 Identities=19% Similarity=0.157 Sum_probs=41.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..+|.+..+.|+|++++.++.+++..+|.- ..=...+..+|- ..+....|...+..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~-~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-VKALYKLGVANM-YFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHH-HHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcccHHHHHHHHHH
Confidence 345578888889999999999999999886653 444555566653 34555666666654
No 169
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=30.92 E-value=1.9e+02 Score=22.65 Aligned_cols=46 Identities=4% Similarity=-0.122 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHh
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYK 53 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~--eERnLls~ayK 53 (261)
+-+..++.+..+.|+|++++..+++++...|.-.. +-.-.+..+|-
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 34677889999999999999999999988776543 23444555553
No 170
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=29.71 E-value=1.6e+02 Score=28.27 Aligned_cols=52 Identities=15% Similarity=0.028 Sum_probs=35.3
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhC
Q 024885 136 AEFKFGDEKKEAAANSMKAYETATTAAEADLPPTH-PIRLGLALNFSVFYYEIMN 189 (261)
Q Consensus 136 aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~-PirLgLaLN~SVF~yEi~~ 189 (261)
+|....+.-.+++++|.++|++|++..++ +..|+ |--.-..||- +-.||..|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 66677777788999999999999999964 55444 4333344443 33366544
No 171
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=28.68 E-value=1e+02 Score=30.41 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
.+.|.++|++|+++ .|.++ ....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~~---~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAFA---DAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35799999999865 34443 445666666665 7999999998888865
No 172
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=28.31 E-value=1.5e+02 Score=20.39 Aligned_cols=57 Identities=14% Similarity=0.011 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHhhhhhhhHHHHHHHH
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYKNVIGARRASWRILS 67 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~--eERnLls~ayKn~i~~~R~s~R~l~ 67 (261)
+..+|....+.|+|++++..+++++...|.-.. +-...+..+|- ..+....+...+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~ 63 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFR 63 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 345566666666777777777666655444332 33333444332 2233444444443
No 173
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=27.40 E-value=22 Score=26.40 Aligned_cols=61 Identities=11% Similarity=0.238 Sum_probs=37.6
Q ss_pred ChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH----HhhhHHHHHH
Q 024885 118 GESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG----LALNFSVFYY 185 (261)
Q Consensus 118 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg----LaLN~SVF~y 185 (261)
+.+.+|+ .|+..-||-.+...-+ .-+....+..+.|++--+ ..|.||..|+ +.-+|++|+-
T Consensus 4 ~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 4 PPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3345565 4555556666544321 124456667777775543 6899999998 6677877654
No 174
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=27.16 E-value=52 Score=28.61 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHP--------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~P--------------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
+.|..+|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 175
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=26.71 E-value=2.2e+02 Score=21.95 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=40.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~ 68 (261)
.-+..++.+..+.|+|++++.++++++..+|. +..=...+..+|.. .+....+...+..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 34556888999999999999999999988776 33334455555533 2445555555544
No 176
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=26.62 E-value=3.6e+02 Score=25.83 Aligned_cols=196 Identities=18% Similarity=0.242 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHH---HhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHH
Q 024885 21 ERYDEMVDAMKNVAKLDVELTVE---ERNLLSVG---YKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVES 94 (261)
Q Consensus 21 eRy~Dm~~~mk~~i~~~~~Ls~e---ERnLls~a---yKn~i~~~R~s~R~l~~~e~k~~~~~~~~~~~~i~~yk~ki~~ 94 (261)
++|..-+.-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++...-+..-...+..||.++..
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 55666677777777654455444 44566665 5567777788888887666676544344445677777777632
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcc--cchhHHHH---HHHHHHHHHHHHH--------H
Q 024885 95 ELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFK--FGDEKKEA---AANSMKAYETATT--------A 161 (261)
Q Consensus 95 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~--~~~~~~~~---~~~A~~aY~~A~~--------~ 161 (261)
| .+.|++=..-|+ .|..==-.-|-||.---.||=. .|.--... ..-+...|+-.-- +
T Consensus 201 -L----~~aIe~Er~~~~-----EEAIqe~~dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI~aLtGidl 270 (526)
T 3iyk_A 201 -L----KNAIEVERDGMQ-----EEAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINALSGIDL 270 (526)
T ss_pred -H----HHHHHHHHhHHH-----HHHHHHHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1 111111111111 0000001123344333333211 12222111 2233556654432 2
Q ss_pred HhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH--HHHHHHHHhhcccCccchHhHHHHHHHHHh
Q 024885 162 AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK--QAFDEAISELDTLNEESYKDSTLIMQLLRD 229 (261)
Q Consensus 162 a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak--~afd~Ai~~ld~l~ee~~~ds~~IlqLLrd 229 (261)
.....|+.||.-|..+|-. =+ .-.+|..-|.-+.. ..+++--.+++.+.++..+-....++--+.
T Consensus 271 sHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 271 THLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred hhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346899999999888842 01 12244443333322 446666667777777666655555544443
No 177
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=26.61 E-value=22 Score=28.44 Aligned_cols=75 Identities=13% Similarity=0.214 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhhcccch--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 024885 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGD--EKKEAAANSMKAYETATTAAEADLPPTHP 171 (261)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~A~~aY~~A~~~a~~~L~pt~P 171 (261)
.+|-.-...+.+.|...| .+-++++|.|.-+|.+-+---.++...|. ...++.. ..+.|+.-.+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 345555556777777777 55678999999999776655555543332 1112222 226666554445444444443
No 178
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=26.60 E-value=2.3e+02 Score=22.03 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=24.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 13 VAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 13 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
++.+..+.|+|++++.+++++++.+|.-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 7888889999999999999999887763
No 179
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=26.55 E-value=1.9e+02 Score=21.15 Aligned_cols=71 Identities=6% Similarity=-0.081 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024885 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (261)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~~~ds~~IlqLLr 228 (261)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5678888888765 45554 344555555554 79999998876665543 2222223455555666
Q ss_pred hhHhhhcc
Q 024885 229 DNLTLWTS 236 (261)
Q Consensus 229 dNl~~W~~ 236 (261)
.-+..+..
T Consensus 143 ~~~~~~~~ 150 (162)
T 3rkv_A 143 ERRAEKKA 150 (162)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 55554443
No 180
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=26.22 E-value=75 Score=25.88 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=48.4
Q ss_pred CCCChhHHHHHHhhcccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCC----CcchHHHhhhHHHHHHHHhCC
Q 024885 115 ASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPT----HPIRLGLALNFSVFYYEIMNS 190 (261)
Q Consensus 115 ~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt----~PirLgLaLN~SVF~yEi~~~ 190 (261)
+.++++-.-|+++--.. -.+..+ ...++-.+.|+.|.. .+||+ ..-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 35677777777662221 001122 567788899998863 46664 33456688999998 455 89
Q ss_pred hHHHHHHHHHHH
Q 024885 191 PERACHLAKQAF 202 (261)
Q Consensus 191 ~~~A~~iak~af 202 (261)
+++|.++=+.|.
T Consensus 76 ~d~aR~vy~~a~ 87 (161)
T 4h7y_A 76 PDDARDYFQMAR 87 (161)
T ss_dssp GGGCHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888777773
No 181
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=25.88 E-value=1.8e+02 Score=20.67 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024885 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (261)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ayKn~i~~~R~s~R~l~~~ 69 (261)
-+..++.+..+.|+|++++.++++++..+|.. ..-...+..+|.. .+....+...+...
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~a~~~~~-~~~~~~A~~~~~~a 107 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKKY-IKGYYRRAASNMA-LGKFRAALRDYETV 107 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 45678888899999999999999999887653 4445555555543 35556666666543
No 182
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=25.38 E-value=1.5e+02 Score=19.50 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~L 40 (261)
.+.+|....+.|+|++++..++++++.+|.-
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 33 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVG 33 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc
Confidence 3567888889999999999999999887764
No 183
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=22.44 E-value=2.9e+02 Score=21.90 Aligned_cols=26 Identities=4% Similarity=0.123 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024885 10 FVYVAKLAEQAERYDEMVDAMKNVAK 35 (261)
Q Consensus 10 l~~~Aklaeq~eRy~Dm~~~mk~~i~ 35 (261)
+..++.+..+.++|++++.++++.++
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34455555555555555555555554
No 184
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=22.08 E-value=70 Score=26.75 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024885 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (261)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 206 (261)
-+.|.++|++|..- . ..|. +++...+|+.|||.+||.=.
T Consensus 19 YE~A~~~Ye~a~~n---g---~~pQ--------------~~Kql~KA~NIAKse~drd~ 57 (199)
T 3ub0_A 19 YEKARADLEEAKKN---D---VSPQ--------------LLKQLTKACNIAKSEFEREA 57 (199)
T ss_dssp HHHHHHHHHHHHHT---T---CCHH--------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---C---CCHH--------------HHHHHHHHHHHHHHHHhHHH
Confidence 46788888888422 2 2332 35678899999999998633
No 185
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=21.95 E-value=1.1e+02 Score=27.37 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=41.5
Q ss_pred cccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024885 129 GDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (261)
Q Consensus 129 gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~A~~iak~afd 203 (261)
|-+|-.+-++.-|+. ++|.+.|++|+++. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 444433334444443 57999999999774 322 455667777777767899988887777765
No 186
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=21.28 E-value=1.2e+02 Score=25.21 Aligned_cols=31 Identities=6% Similarity=0.021 Sum_probs=22.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 38 (261)
+.+..++.+..+.|+|++++.++.+++..+|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456677777788888888888887776544
No 187
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=20.63 E-value=1.7e+02 Score=21.17 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHH--------HHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccc
Q 024885 84 RIKEYRQKVESELSD--------ICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYR 133 (261)
Q Consensus 84 ~i~~yk~ki~~EL~~--------~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyR 133 (261)
.+.+|...+++-|.. ...++++++..++- .++-|+ + |||+-+
T Consensus 8 ki~kYi~~leeaL~~i~~~~l~~~a~~~l~mA~~Y~~------Da~~fl-~-kGD~v~ 57 (87)
T 2pmr_A 8 RIEKDLELLEKNLMEMKSIKLSDDEEAVVERALNYRD------DSVYYL-E-KGDHIT 57 (87)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH------HHHHHH-H-TTCHHH
T ss_pred HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHH------HHHHHH-H-cCCHHH
Confidence 344455555544443 34778888887772 244443 4 588754
No 188
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=20.19 E-value=2.6e+02 Score=20.49 Aligned_cols=44 Identities=16% Similarity=0.041 Sum_probs=29.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024885 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (261)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~Ls~eERnLls~ay 52 (261)
+-+..++.+..+.|+|++++..+++++..+|. +.+-...+..+|
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 65 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACR 65 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHH
Confidence 34556777778888888888888888876665 334444455554
Done!