Your job contains 1 sequence.
>024888
MLEKQIELLRSMQRSQLSMMFTNQEDDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAP
TFVSTVEVGGEVFSGQGAKSKKQAEMSAAKVAYMRLKEPNPSQGPALVSPDIQAQADYSS
SSLQSNVTADLHHNIQTAGRLVFNPNSMPKVQAEEIRELTTVNTEVAGYDLSQFPQPEFS
SSSDLSASSGVEKGMPSSSLPLECTVDPRVDPIAQSVRADGRTCKIIRVRPNRPNMKFPE
GSSVLHRDNQWVAWTDGSQSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024888
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081620 - symbol:DRB4 "double-stranded-RNA-bin... 265 9.4e-27 2
TAIR|locus:2057491 - symbol:DRB2 "dsRNA-binding protein 2... 180 3.5e-13 1
TAIR|locus:2829928 - symbol:DRB3 "dsRNA-binding protein 3... 178 3.6e-13 1
TAIR|locus:2163016 - symbol:DRB5 "dsRNA-binding protein 5... 171 4.1e-12 2
UNIPROTKB|Q0IQN6 - symbol:DRB8 "Double-stranded RNA-bindi... 146 7.6e-08 1
TAIR|locus:2024407 - symbol:HYL1 "HYPONASTIC LEAVES 1" sp... 141 2.9e-07 1
UNIPROTKB|C9JUP4 - symbol:ADARB1 "Double-stranded RNA-spe... 109 5.9e-06 1
UNIPROTKB|F1SG34 - symbol:F1SG34 "Uncharacterized protein... 130 9.5e-06 1
ZFIN|ZDB-GENE-000627-2 - symbol:adarb1a "adenosine deamin... 131 1.0e-05 1
UNIPROTKB|E2R5U0 - symbol:ADARB1 "Uncharacterized protein... 130 1.3e-05 1
MGI|MGI:891999 - symbol:Adarb1 "adenosine deaminase, RNA-... 128 2.2e-05 1
RGD|2033 - symbol:Adarb1 "adenosine deaminase, RNA-specif... 128 2.2e-05 1
ZFIN|ZDB-GENE-030219-15 - symbol:adarb1b "adenosine deami... 128 2.3e-05 1
UNIPROTKB|F1NGD4 - symbol:ADARB1 "Uncharacterized protein... 127 2.7e-05 1
UNIPROTKB|Q90VV7 - symbol:ADARB1 "Uncharacterized protein... 127 2.7e-05 1
UNIPROTKB|F1NGD2 - symbol:ADARB1 "Uncharacterized protein... 127 2.8e-05 1
UNIPROTKB|Q90VZ5 - symbol:ADARB1 "Adenosine deaminase" sp... 127 2.8e-05 1
UNIPROTKB|F1N0T4 - symbol:ADARB1 "Uncharacterized protein... 127 3.0e-05 1
UNIPROTKB|G5E9B4 - symbol:ADARB1 "Double-stranded RNA-spe... 127 3.0e-05 1
UNIPROTKB|P78563 - symbol:ADARB1 "Double-stranded RNA-spe... 127 3.1e-05 1
UNIPROTKB|F8VP94 - symbol:TARBP2 "RISC-loading complex su... 97 0.00013 1
UNIPROTKB|F8VTT7 - symbol:TARBP2 "RISC-loading complex su... 97 0.00013 1
UNIPROTKB|F8VYK6 - symbol:TARBP2 "RISC-loading complex su... 97 0.00013 1
UNIPROTKB|F8VZZ7 - symbol:TARBP2 "RISC-loading complex su... 97 0.00013 1
TIGR_CMR|APH_1149 - symbol:APH_1149 "ribonuclease III" sp... 113 0.00017 1
UNIPROTKB|F1MM26 - symbol:ADARB2 "Uncharacterized protein... 119 0.00025 1
UNIPROTKB|F8VYK3 - symbol:TARBP2 "RISC-loading complex su... 104 0.00099 1
>TAIR|locus:2081620 [details] [associations]
symbol:DRB4 "double-stranded-RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISS;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA;IMP] [GO:0060145 "viral gene silencing in virus
induced gene silencing" evidence=IMP] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0019048 Gene3D:3.30.160.20
EMBL:AL162651 GO:GO:0003725 GO:GO:0010267 GO:GO:0035196
GO:GO:0070919 EMBL:AB455097 EMBL:AY074363 EMBL:AY150509
IPI:IPI00529941 IPI:IPI00914309 PIR:T48069 RefSeq:NP_001154686.1
RefSeq:NP_191839.2 RefSeq:NP_974480.1 UniGene:At.34049
ProteinModelPortal:Q8H1D4 SMR:Q8H1D4 IntAct:Q8H1D4 STRING:Q8H1D4
PaxDb:Q8H1D4 PRIDE:Q8H1D4 EnsemblPlants:AT3G62800.1
EnsemblPlants:AT3G62800.2 GeneID:825455 KEGG:ath:AT3G62800
TAIR:At3g62800 eggNOG:NOG306267 HOGENOM:HOG000072681
InParanoid:Q8H1D4 OMA:YANEREG PhylomeDB:Q8H1D4
ProtClustDB:CLSN2690620 Genevestigator:Q8H1D4 GO:GO:0060145
Uniprot:Q8H1D4
Length = 355
Score = 265 (98.3 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 71/184 (38%), Positives = 98/184 (53%)
Query: 25 EDDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQA 84
E V YKN+LQE+AQKE+ LP Y T SG SHAPTF STVE G+VFSG+ AK+KK A
Sbjct: 77 EGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEFAGKVFSGEEAKTKKLA 136
Query: 85 EMSAAKVAYMRLKEPNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQTAGRLVFN 144
EMSAAKVA+M +K N +Q + P + Q D +S+ S ++H Q + ++V
Sbjct: 137 EMSAAKVAFMSIKNGNSNQTGSPTLPS-ERQEDVNSNVKSS--PQEIHS--QPSSKVVMT 191
Query: 145 PNSMPK---VQAEEIRELTTV---NTEVAGYDLXXXXXXXXXXXXXXXXXXGVEKGMPSS 198
P++ K V +E +L N + L G++ + SS
Sbjct: 192 PDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNEPENPTNDGTLSALTTDGMKMNIASS 251
Query: 199 SLPL 202
SLP+
Sbjct: 252 SLPI 255
Score = 109 (43.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 34/101 (33%), Positives = 45/101 (44%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVF-SGQGAKSKKQAEMSA 88
+YK LQ A + LPVY ++ G HAP F V G+ F S + + K AE +A
Sbjct: 4 VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63
Query: 89 AKVAYMRLKEPNPSQGPALVSPDIQAQADYSSSSLQSNVTA 129
AK+A L +P +Q A SS L TA
Sbjct: 64 AKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATA 104
Score = 51 (23.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 230 RPNRPNMKFPEGSSVLHRDNQWVAW 254
RP P + P+ + +L RD++++A+
Sbjct: 326 RPWNPEITLPQDAEMLFRDDKFIAY 350
>TAIR|locus:2057491 [details] [associations]
symbol:DRB2 "dsRNA-binding protein 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.30.160.20
GO:GO:0003725 EMBL:AC006283 GO:GO:0035196 EMBL:AY034976
EMBL:AY062965 IPI:IPI00547657 PIR:B84684 RefSeq:NP_565672.1
UniGene:At.13732 ProteinModelPortal:Q9SKN2 SMR:Q9SKN2 IntAct:Q9SKN2
STRING:Q9SKN2 PRIDE:Q9SKN2 EnsemblPlants:AT2G28380.1 GeneID:817386
KEGG:ath:AT2G28380 TAIR:At2g28380 eggNOG:NOG291691
HOGENOM:HOG000243232 InParanoid:Q9SKN2 OMA:PCHSMAP PhylomeDB:Q9SKN2
ProtClustDB:CLSN2688512 Genevestigator:Q9SKN2 GO:GO:0070919
Uniprot:Q9SKN2
Length = 434
Score = 180 (68.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 26 DDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAE 85
D++ +YKN+LQE+AQ+ LP Y T +SG H P F TVE+ G F+G AK+KKQAE
Sbjct: 83 DETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFTGTVELAGITFTGDPAKNKKQAE 142
Query: 86 MSAAKVAYMRLKEPNPSQGPALVSPD 111
+AA A+ LK+ ++ P+
Sbjct: 143 KNAAMAAWSSLKQLAKETSSSMPEPE 168
Score = 156 (60.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/78 (46%), Positives = 45/78 (57%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVF-SGQGAKSKKQAEMSA 88
+YKN LQELAQ+ + LP Y + G HAP F +TV GE+F S Q + +QAE SA
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60
Query: 89 AKVAYMRLKEPNPSQGPA 106
A+VA L PS A
Sbjct: 61 AEVALNALSNRGPSHSLA 78
>TAIR|locus:2829928 [details] [associations]
symbol:DRB3 "dsRNA-binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 HOGENOM:HOG000243232
EMBL:BT012284 EMBL:AP000602 EMBL:AK222128 IPI:IPI00525256
RefSeq:NP_001030779.2 RefSeq:NP_189329.3 UniGene:At.37133
ProteinModelPortal:Q9LJF5 SMR:Q9LJF5 STRING:Q9LJF5
EnsemblPlants:AT3G26932.1 EnsemblPlants:AT3G26932.2 GeneID:822310
KEGG:ath:AT3G26932 TAIR:At3g26932 eggNOG:NOG246955
InParanoid:Q2V3S2 OMA:SSVERNC PhylomeDB:Q9LJF5
ProtClustDB:CLSN2680394 Genevestigator:Q9LJF5 Uniprot:Q9LJF5
Length = 359
Score = 178 (67.7 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 26 DDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAE 85
D++ +YKN+LQE A + LPVY + +SG H PTF TVE+ G F+G+ AK+KKQAE
Sbjct: 83 DETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNGESAKTKKQAE 142
Query: 86 MSAAKVAYMRLKE 98
+AA A+ L++
Sbjct: 143 KNAAIAAWFSLRK 155
Score = 153 (58.9 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVF-SGQGAKSKKQAEMSA 88
+YKN LQELAQ+ ++LP Y + G HAP F ++V GE+F S + +QAE SA
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 89 AKVAYMRLKEPNPSQ 103
A+VA L PS+
Sbjct: 61 AEVALSALSSKGPSK 75
>TAIR|locus:2163016 [details] [associations]
symbol:DRB5 "dsRNA-binding protein 5" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010267 "production
of ta-siRNAs involved in RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 HOGENOM:HOG000243232 ProtClustDB:CLSN2680394
EMBL:AB010072 EMBL:AK117808 EMBL:BT009653 IPI:IPI00534111
RefSeq:NP_198923.2 UniGene:At.30254 ProteinModelPortal:Q8GY79
SMR:Q8GY79 IntAct:Q8GY79 STRING:Q8GY79 EnsemblPlants:AT5G41070.1
GeneID:834109 KEGG:ath:AT5G41070 TAIR:At5g41070 eggNOG:NOG295240
InParanoid:Q8GY79 OMA:LRWINLL PhylomeDB:Q8GY79
Genevestigator:Q8GY79 Uniprot:Q8GY79
Length = 393
Score = 171 (65.3 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 26 DDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAE 85
D++ +YKN+LQE A + LP+Y + +SG H P F TVE+ G F+G+ AK+KKQAE
Sbjct: 83 DETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFSCTVELAGMTFTGESAKTKKQAE 142
Query: 86 MSAAKVAYMRLKE 98
+AA A+ LK+
Sbjct: 143 KNAAIAAWSSLKK 155
Score = 135 (52.6 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVF-SGQGAKSKKQAEMSA 88
+YKN LQELAQ+ + LP Y + G HAP F ++V GE+F S + +QAE +A
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60
Query: 89 AKVAYMRLKEPNPSQ 103
A+V+ L PS+
Sbjct: 61 AEVSLNVLSSRVPSK 75
Score = 37 (18.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 144 NPNSMPKVQAEEIRELTTVN 163
NPN P + + E T+ N
Sbjct: 335 NPNLNPSSLSSSVNEFTSSN 354
>UNIPROTKB|Q0IQN6 [details] [associations]
symbol:DRB8 "Double-stranded RNA-binding protein 8"
species:39947 "Oryza sativa Japonica Group" [GO:0003725
"double-stranded RNA binding" evidence=IDA] InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GO:GO:0016075 EMBL:AP008218 GO:GO:0004525 EMBL:AB036988
EMBL:DQ009988 RefSeq:NP_001065960.1 UniGene:Os.3740
EnsemblPlants:LOC_Os12g01916.1 GeneID:4351288
KEGG:dosa:Os12t0109900-02 KEGG:osa:4351288 Gramene:Q0IQN6
HOGENOM:HOG000119022 OMA:TPKPLKV ProtClustDB:CLSN2695502
PANTHER:PTHR11207 Uniprot:Q0IQN6
Length = 424
Score = 146 (56.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAA 89
L KN+LQE AQK YA+P Y +S AP F+ TVE+GG + G A++KK AE+ AA
Sbjct: 118 LCKNLLQEYAQKMNYAIPSYICTKSASGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAA 176
Query: 90 KVAYMRLKEPNPSQGPA 106
+ A + ++ S+G A
Sbjct: 177 RTALLAIQ--GQSEGSA 191
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 26 DDSVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSG-QGAKSKKQA 84
++ ++K+ LQE AQK P Y+T + G SH P F STV + + G ++K A
Sbjct: 29 ENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAA 88
Query: 85 EMSAAKVAYMRLKEPNPSQG--PAL 107
E SAA+VA M + + P+ PA+
Sbjct: 89 EQSAAEVALMEIVKSIPANANIPAV 113
>TAIR|locus:2024407 [details] [associations]
symbol:HYL1 "HYPONASTIC LEAVES 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035279 "mRNA cleavage involved
in gene silencing by miRNA" evidence=IMP] [GO:0031054 "pre-miRNA
processing" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA;IMP] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0010445 "nuclear dicing body" evidence=IDA] [GO:0051607
"defense response to virus" evidence=RCA] [GO:0010305 "leaf
vascular tissue pattern formation" evidence=IMP] [GO:0010589 "leaf
proximal/distal pattern formation" evidence=IMP] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0009735
GO:GO:0009733 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0035198
GO:GO:0035279 GO:GO:0031054 GO:GO:0010267 GO:GO:0010305
EMBL:AC000132 EMBL:AF276440 EMBL:AY054631 EMBL:AY081525
EMBL:AK319123 IPI:IPI00525041 IPI:IPI00975255 PIR:H86230
RefSeq:NP_563850.1 UniGene:At.10223 PDB:2L2M PDB:2L2N PDB:3ADG
PDB:3ADI PDB:3ADJ PDBsum:2L2M PDBsum:2L2N PDBsum:3ADG PDBsum:3ADI
PDBsum:3ADJ ProteinModelPortal:O04492 SMR:O04492 DIP:DIP-33453N
IntAct:O04492 STRING:O04492 PaxDb:O04492 PRIDE:O04492
EnsemblPlants:AT1G09700.1 GeneID:837498 KEGG:ath:AT1G09700
TAIR:At1g09700 eggNOG:NOG237225 InParanoid:O04492 OMA:CMNGLKE
ProtClustDB:CLSN2916994 EvolutionaryTrace:O04492
Genevestigator:O04492 GO:GO:0010445 GO:GO:0010589 Uniprot:O04492
Length = 419
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 9 LRSMQRS-QLSMMFTNQEDDSVLYKNVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTV 66
LR + +S +LS + ++ L KN+LQE AQK YA+P+Y K F TV
Sbjct: 79 LRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTV 138
Query: 67 EVGGEVFSGQGAKSKKQAEMSAAKVAYMRLK 97
E+GG ++G ++KK AE+SA + A + ++
Sbjct: 139 EIGGIKYTGAATRTKKDAEISAGRTALLAIQ 169
>UNIPROTKB|C9JUP4 [details] [associations]
symbol:ADARB1 "Double-stranded RNA-specific editase 1"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0006382 "adenosine to inosine editing"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005654 GO:GO:0005730
GO:GO:0016556 Gene3D:3.30.160.20 GO:GO:0003725 EMBL:AP001579
HGNC:HGNC:226 EMBL:AL133499 EMBL:BX322560 IPI:IPI00783018
ProteinModelPortal:C9JUP4 SMR:C9JUP4 STRING:C9JUP4
Ensembl:ENST00000449478 HOGENOM:HOG000213660 ArrayExpress:C9JUP4
Bgee:C9JUP4 Uniprot:C9JUP4
Length = 141
Score = 109 (43.4 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ A
Sbjct: 77 VLPKNALMQLNEIKP-GLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHA 134
Query: 89 AKVA 92
A+ A
Sbjct: 135 AEKA 138
>UNIPROTKB|F1SG34 [details] [associations]
symbol:F1SG34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0045070 "positive regulation of viral genome replication"
evidence=IEA] [GO:0044387 "negative regulation of protein kinase
activity by regulation of protein phosphorylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0006382 "adenosine to inosine editing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003726 "double-stranded
RNA adenosine deaminase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137
PROSITE:PS50141 SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0006396 GO:GO:0004000 GO:GO:0003725
GeneTree:ENSGT00550000074412 EMBL:CU466368
Ensembl:ENSSSCT00000013223 OMA:ADAKENR Uniprot:F1SG34
Length = 565
Score = 130 (50.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAA 89
L KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ AA
Sbjct: 81 LPKNALMQLNEIKP-GLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHAA 138
Query: 90 KVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSS 122
+ A + PN S+ + + A AD++S +
Sbjct: 139 EKALRSFVQFPNASEAHLAMGRTLSANADFTSDA 172
>ZFIN|ZDB-GENE-000627-2 [details] [associations]
symbol:adarb1a "adenosine deaminase, RNA-specific,
B1a" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0004000
"adenosine deaminase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137
PROSITE:PS50141 SMART:SM00358 SMART:SM00552 InterPro:IPR014720
ZFIN:ZDB-GENE-000627-2 GO:GO:0005634 Gene3D:3.30.160.20
GO:GO:0006396 GO:GO:0003725 GO:GO:0003726 HOVERGEN:HBG003836
HSSP:Q91836 EMBL:AF403110 EMBL:AF403112 IPI:IPI00855450
UniGene:Dr.10298 SMR:Q90VY9 InParanoid:Q90VY9 Uniprot:Q90VY9
Length = 720
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/93 (35%), Positives = 52/93 (55%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
+L KN L +L + + L Q+G HAP FV TVEV G++F G G +KK+A+++A
Sbjct: 93 ILPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGP-TKKKAKLNA 150
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSS 120
A+ A + PN S+ + + AD++S
Sbjct: 151 AEKALRSFVQFPNASEAHLAMGRTLTVNADFTS 183
>UNIPROTKB|E2R5U0 [details] [associations]
symbol:ADARB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0004000 "adenosine deaminase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0006396
GO:GO:0004000 GO:GO:0003725 GeneTree:ENSGT00550000074412 CTD:104
KO:K13194 OMA:PPLYTLN EMBL:AAEX03016641 EMBL:AAEX03016642
RefSeq:XP_544931.3 Ensembl:ENSCAFT00000017660 GeneID:487809
KEGG:cfa:487809 Uniprot:E2R5U0
Length = 701
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/112 (33%), Positives = 58/112 (51%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAA 89
L KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ AA
Sbjct: 78 LPKNALMQLNEIKP-GLQYALLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHAA 135
Query: 90 KVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQTAGR 140
+ A + PN S+ + + A D++S Q++ L + +T R
Sbjct: 136 EKALRSFVQFPNASEAHLAMGRTLSANTDFTSD--QADFPDTLFNGFETPDR 185
>MGI|MGI:891999 [details] [associations]
symbol:Adarb1 "adenosine deaminase, RNA-specific, B1"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=ISO;ISS] [GO:0003726 "double-stranded RNA adenosine
deaminase activity" evidence=ISO;ISS] [GO:0004000 "adenosine
deaminase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006382 "adenosine to
inosine editing" evidence=ISO;IDA] [GO:0006396 "RNA processing"
evidence=ISO;ISS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0016556 "mRNA modification" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030336
"negative regulation of cell migration" evidence=ISO] [GO:0044387
"negative regulation of protein kinase activity by regulation of
protein phosphorylation" evidence=ISO] [GO:0045070 "positive
regulation of viral genome replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=ISO] InterPro:IPR001159 InterPro:IPR002466
Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137 PROSITE:PS50141
SMART:SM00358 SMART:SM00552 InterPro:IPR014720 MGI:MGI:891999
GO:GO:0008285 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872
GO:GO:0016556 GO:GO:0006397 Gene3D:3.30.160.20 EMBL:CH466553
GO:GO:0006396 GO:GO:0030336 GO:GO:0051726 GO:GO:0003725
GeneTree:ENSGT00550000074412 eggNOG:NOG292433 GO:GO:0003726
GO:GO:0006382 GO:GO:0045070 GO:GO:0044387 EMBL:FJ169505 CTD:104
HOVERGEN:HBG003836 KO:K13194 OMA:PPLYTLN EMBL:AF403106
EMBL:AF403107 EMBL:AF403108 EMBL:AF403109 EMBL:AF525421
EMBL:AY162454 EMBL:AF291049 EMBL:AK141777 EMBL:AK147298
IPI:IPI00467221 IPI:IPI00556733 IPI:IPI00556763 IPI:IPI00556798
IPI:IPI00556868 IPI:IPI01019222 RefSeq:NP_001020008.1
RefSeq:NP_570965.2 UniGene:Mm.276815 PDB:2L2K PDBsum:2L2K
ProteinModelPortal:Q91ZS8 SMR:Q91ZS8 STRING:Q91ZS8
PhosphoSite:Q91ZS8 PaxDb:Q91ZS8 PRIDE:Q91ZS8 DNASU:110532
Ensembl:ENSMUST00000020496 Ensembl:ENSMUST00000098374
Ensembl:ENSMUST00000105406 GeneID:110532 KEGG:mmu:110532
UCSC:uc007fvl.2 UCSC:uc007fvm.2 UCSC:uc007fvn.2 UCSC:uc007fvp.2
InParanoid:Q3UHM7 EvolutionaryTrace:Q3UHM7 NextBio:364167
Bgee:Q91ZS8 CleanEx:MM_ADARB1 Genevestigator:Q91ZS8
GermOnline:ENSMUSG00000020262 Uniprot:Q91ZS8
Length = 711
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ A
Sbjct: 77 VLPKNALMQLNEIKP-GLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHA 134
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 135 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 182
>RGD|2033 [details] [associations]
symbol:Adarb1 "adenosine deaminase, RNA-specific, B1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISO;ISS]
[GO:0003726 "double-stranded RNA adenosine deaminase activity"
evidence=ISO;ISS;NAS;IDA] [GO:0004000 "adenosine deaminase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA]
[GO:0006382 "adenosine to inosine editing" evidence=ISO;ISS]
[GO:0006396 "RNA processing" evidence=IEA;ISO;ISS] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;ISS] [GO:0016556 "mRNA modification"
evidence=NAS;IDA] [GO:0030336 "negative regulation of cell migration"
evidence=ISO;ISS] [GO:0044387 "negative regulation of protein kinase
activity by regulation of protein phosphorylation" evidence=ISO;ISS]
[GO:0045070 "positive regulation of viral genome replication"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=ISO;ISS]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 RGD:2033 GO:GO:0008285 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 GO:GO:0016556 GO:GO:0006397 Gene3D:3.30.160.20
GO:GO:0006396 GO:GO:0030336 GO:GO:0051726 GO:GO:0003725
eggNOG:NOG292433 GO:GO:0003726 GO:GO:0006382 GO:GO:0045070
GO:GO:0044387 CTD:104 HOVERGEN:HBG003836 KO:K13194 EMBL:U43534
IPI:IPI00202145 PIR:S68443 RefSeq:NP_001104525.1
RefSeq:NP_001104526.1 RefSeq:NP_001104527.1 RefSeq:NP_037026.2
UniGene:Rn.172406 UniGene:Rn.89675 PDB:2B7T PDB:2B7V PDB:2L3C
PDB:2L3J PDBsum:2B7T PDBsum:2B7V PDBsum:2L3C PDBsum:2L3J
ProteinModelPortal:P51400 SMR:P51400 STRING:P51400 GeneID:25367
KEGG:rno:25367 UCSC:RGD:2033 HOGENOM:HOG000290164 InParanoid:P51400
OrthoDB:EOG4MGS70 EvolutionaryTrace:P51400 NextBio:606369
Genevestigator:P51400 GermOnline:ENSRNOG00000001227 Uniprot:P51400
Length = 711
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ A
Sbjct: 77 VLPKNALMQLNEIKP-GLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHA 134
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 135 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 182
>ZFIN|ZDB-GENE-030219-15 [details] [associations]
symbol:adarb1b "adenosine deaminase, RNA-specific,
B1b" species:7955 "Danio rerio" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004000 "adenosine deaminase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] InterPro:IPR001159
InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137
PROSITE:PS50141 SMART:SM00358 SMART:SM00552 InterPro:IPR014720
ZFIN:ZDB-GENE-030219-15 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0006396 GO:GO:0004000 GO:GO:0003725
GeneTree:ENSGT00550000074412 EMBL:BX005108 IPI:IPI00485272
Ensembl:ENSDART00000024657 Bgee:E7F8L3 Uniprot:E7F8L3
Length = 728
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV TVEV G++F G G +KK+A+++A
Sbjct: 103 VLPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGP-TKKKAKLNA 160
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSS 120
A+ A + PN S+ + + D++S
Sbjct: 161 AEKALRSFVQFPNASEAHLAMGRTLTVNTDFTS 193
>UNIPROTKB|F1NGD4 [details] [associations]
symbol:ADARB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004000 "adenosine deaminase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0006396
GO:GO:0004000 GO:GO:0003725 GeneTree:ENSGT00550000074412
EMBL:AADN02034391 EMBL:AADN02034392 EMBL:AADN02034393
IPI:IPI00820736 Ensembl:ENSGALT00000039531 Uniprot:F1NGD4
Length = 679
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV VEV G+VF G G +KK+A++ A
Sbjct: 57 VLPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMAVEVNGQVFEGSGP-TKKKAKLHA 114
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 115 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 162
>UNIPROTKB|Q90VV7 [details] [associations]
symbol:ADARB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006382 "adenosine to inosine editing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0030336 "negative regulation of
cell migration" evidence=IEA] [GO:0044387 "negative regulation of
protein kinase activity by regulation of protein phosphorylation"
evidence=IEA] [GO:0045070 "positive regulation of viral genome
replication" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
evidence=ISS] [GO:0003726 "double-stranded RNA adenosine deaminase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 GO:GO:0005634 Gene3D:3.30.160.20 GO:GO:0006396
GO:GO:0003725 GeneTree:ENSGT00550000074412 GO:GO:0003726
HOVERGEN:HBG003836 HOGENOM:HOG000290164 HSSP:P25159
EMBL:AADN02034391 EMBL:AADN02034392 EMBL:AADN02034393 EMBL:AF403117
EMBL:AF403121 IPI:IPI00821358 UniGene:Gga.2137 SMR:Q90VV7
Ensembl:ENSGALT00000039530 InParanoid:Q90VV7 Uniprot:Q90VV7
Length = 680
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV VEV G+VF G G +KK+A++ A
Sbjct: 57 VLPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMAVEVNGQVFEGSGP-TKKKAKLHA 114
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 115 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 162
>UNIPROTKB|F1NGD2 [details] [associations]
symbol:ADARB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004000 "adenosine deaminase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0006396
GO:GO:0004000 GO:GO:0003725 GeneTree:ENSGT00550000074412
EMBL:AADN02034391 EMBL:AADN02034392 EMBL:AADN02034393
IPI:IPI00821422 Ensembl:ENSGALT00000012174
Ensembl:ENSGALT00000039533 Uniprot:F1NGD2
Length = 700
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV VEV G+VF G G +KK+A++ A
Sbjct: 78 VLPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMAVEVNGQVFEGSGP-TKKKAKLHA 135
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 136 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 183
>UNIPROTKB|Q90VZ5 [details] [associations]
symbol:ADARB1 "Adenosine deaminase" species:9031 "Gallus
gallus" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
[GO:0003726 "double-stranded RNA adenosine deaminase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006382
"adenosine to inosine editing" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0030336 "negative regulation of
cell migration" evidence=IEA] [GO:0044387 "negative regulation of
protein kinase activity by regulation of protein phosphorylation"
evidence=IEA] [GO:0045070 "positive regulation of viral genome
replication" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035
Pfam:PF02137 PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358
SMART:SM00552 InterPro:IPR014720 GO:GO:0005634 Gene3D:3.30.160.20
GO:GO:0006396 GO:GO:0003725 GeneTree:ENSGT00550000074412
GO:GO:0003726 CTD:104 HOVERGEN:HBG003836 KO:K13194 OMA:PPLYTLN
HOGENOM:HOG000290164 HSSP:P25159 EMBL:AADN02034391
EMBL:AADN02034392 EMBL:AADN02034393 UniGene:Gga.2137 EMBL:AF403115
EMBL:AF403119 EMBL:AJ719343 IPI:IPI00590426 RefSeq:NP_001104544.1
RefSeq:NP_989571.1 SMR:Q90VZ5 Ensembl:ENSGALT00000039535
GeneID:374087 KEGG:gga:374087 InParanoid:Q90VZ5 NextBio:20813606
Uniprot:Q90VZ5
Length = 701
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV VEV G+VF G G +KK+A++ A
Sbjct: 78 VLPKNALMQLNEIKP-GLQYKLLSQTGPVHAPVFVMAVEVNGQVFEGSGP-TKKKAKLHA 135
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 136 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 183
>UNIPROTKB|F1N0T4 [details] [associations]
symbol:ADARB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0045070 "positive regulation of viral genome replication"
evidence=IEA] [GO:0044387 "negative regulation of protein kinase
activity by regulation of protein phosphorylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0006382 "adenosine to inosine editing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003726 "double-stranded
RNA adenosine deaminase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137
PROSITE:PS50141 SMART:SM00358 SMART:SM00552 InterPro:IPR014720
GO:GO:0005634 Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0003725
GeneTree:ENSGT00550000074412 GO:GO:0003726 OMA:PPLYTLN
EMBL:DAAA02003431 IPI:IPI00700461 Ensembl:ENSBTAT00000023240
Uniprot:F1N0T4
Length = 721
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 30 LYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAA 89
L KN L +L + + L Q+G HAP F+ +VEV G+VF G G +KK+A++ AA
Sbjct: 96 LPKNALMQLNEIKP-GLQYTLLSQTGPVHAPLFLMSVEVNGQVFEGSGP-TKKKAKLHAA 153
Query: 90 KVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQTAGR 140
+ A + PN S+ + + AD++S Q++ L + +T R
Sbjct: 154 EKALRSFVQFPNASEAHLAMGRSLSTNADFTSD--QADFPDALFNGFETPDR 203
>UNIPROTKB|G5E9B4 [details] [associations]
symbol:ADARB1 "Double-stranded RNA-specific editase 1"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004000 "adenosine deaminase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 Gene3D:3.30.160.20 EMBL:CH471079 GO:GO:0005622
GO:GO:0006396 GO:GO:0004000 GO:GO:0003725 EMBL:AP001579
UniGene:Hs.474018 HGNC:HGNC:226 EMBL:AL133499 EMBL:BX322560
ProteinModelPortal:G5E9B4 SMR:G5E9B4 Ensembl:ENST00000389861
ArrayExpress:G5E9B4 Bgee:G5E9B4 Uniprot:G5E9B4
Length = 729
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ A
Sbjct: 105 VLPKNALMQLNEIKP-GLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHA 162
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 163 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 210
>UNIPROTKB|P78563 [details] [associations]
symbol:ADARB1 "Double-stranded RNA-specific editase 1"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;IDA] [GO:0004000 "adenosine deaminase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0045070 "positive regulation of viral
genome replication" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0044387 "negative regulation of protein kinase
activity by regulation of protein phosphorylation" evidence=IDA]
[GO:0006382 "adenosine to inosine editing" evidence=IDA;TAS]
[GO:0030336 "negative regulation of cell migration" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0051726 "regulation of cell cycle" evidence=IDA]
[GO:0003726 "double-stranded RNA adenosine deaminase activity"
evidence=IDA] [GO:0006396 "RNA processing" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016553 "base conversion or
substitution editing" evidence=IC] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016556 "mRNA modification"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=TAS]
Reactome:REACT_71 InterPro:IPR001159 InterPro:IPR002466
Pfam:PF00035 Pfam:PF02137 PROSITE:PS50137 PROSITE:PS50141
SMART:SM00358 SMART:SM00552 InterPro:IPR014720 GO:GO:0005634
GO:GO:0010467 GO:GO:0008285 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 Reactome:REACT_1675 GO:GO:0003729 GO:GO:0016556
GO:GO:0006397 Gene3D:3.30.160.20 EMBL:CH471079 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0016553 GO:GO:0006396
GO:GO:0030336 GO:GO:0051726 GO:GO:0004000 GO:GO:0003725
eggNOG:NOG292433 GO:GO:0003726 GO:GO:0006382 GO:GO:0045070
GO:GO:0044387 InterPro:IPR008996 SUPFAM:SSF50353 EMBL:AL163301
EMBL:U82120 EMBL:U82121 EMBL:X99227 EMBL:X99383 EMBL:U76420
EMBL:U76421 EMBL:U76422 EMBL:AF001042 EMBL:AF525422 EMBL:AY135659
EMBL:AB194370 EMBL:AB194371 EMBL:AB194372 EMBL:AP001579
EMBL:FJ169505 IPI:IPI00020368 IPI:IPI00184874 IPI:IPI00334613
IPI:IPI00477012 IPI:IPI01019091 RefSeq:NP_001103.1
RefSeq:NP_056648.1 RefSeq:NP_056649.1 UniGene:Hs.474018 PDB:1ZY7
PDBsum:1ZY7 ProteinModelPortal:P78563 SMR:P78563 IntAct:P78563
STRING:P78563 PhosphoSite:P78563 DMDM:2829669 PaxDb:P78563
PRIDE:P78563 Ensembl:ENST00000348831 Ensembl:ENST00000360697
Ensembl:ENST00000389863 Ensembl:ENST00000492414
Ensembl:ENST00000496664 Ensembl:ENST00000539173 GeneID:104
KEGG:hsa:104 UCSC:uc002zgr.2 UCSC:uc002zgt.2 UCSC:uc002zgy.2
CTD:104 GeneCards:GC21P046493 HGNC:HGNC:226 HPA:HPA018277
HPA:HPA029645 MIM:601218 neXtProt:NX_P78563 PharmGKB:PA24556
HOVERGEN:HBG003836 InParanoid:P78563 KO:K13194 OMA:PPLYTLN
EvolutionaryTrace:P78563 GenomeRNAi:104 NextBio:399
ArrayExpress:P78563 Bgee:P78563 Genevestigator:P78563
GermOnline:ENSG00000197381 Uniprot:P78563
Length = 741
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 29 VLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSA 88
VL KN L +L + + L Q+G HAP FV +VEV G+VF G G +KK+A++ A
Sbjct: 77 VLPKNALMQLNEIKP-GLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGP-TKKKAKLHA 134
Query: 89 AKVAYMRLKE-PNPSQGPALVSPDIQAQADYSSSSLQSNVTADLHHNIQT 137
A+ A + PN S+ + + D++S Q++ L + +T
Sbjct: 135 AEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSD--QADFPDTLFNGFET 182
>UNIPROTKB|F8VP94 [details] [associations]
symbol:TARBP2 "RISC-loading complex subunit TARBP2"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AC023509 HGNC:HGNC:11569
IPI:IPI01020890 ProteinModelPortal:F8VP94 SMR:F8VP94
Ensembl:ENST00000550147 ArrayExpress:F8VP94 Bgee:F8VP94
Uniprot:F8VP94
Length = 113
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 33 NVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAAKV 91
++LQE + PVY+ K G++H P F V VG +GQG SKK A+ AA+V
Sbjct: 33 SLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGP-SKKAAKHKAAEV 90
Query: 92 AYMRLKEPNPSQGPAL 107
A LK + + PAL
Sbjct: 91 ALKHLKGGSMLE-PAL 105
>UNIPROTKB|F8VTT7 [details] [associations]
symbol:TARBP2 "RISC-loading complex subunit TARBP2"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AC023509 HGNC:HGNC:11569
IPI:IPI01021810 ProteinModelPortal:F8VTT7 SMR:F8VTT7
Ensembl:ENST00000548971 ArrayExpress:F8VTT7 Bgee:F8VTT7
Uniprot:F8VTT7
Length = 94
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 33 NVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAAKV 91
++LQE + PVY+ K G++H P F V VG +GQG SKK A+ AA+V
Sbjct: 18 SLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGP-SKKAAKHKAAEV 75
Query: 92 AYMRLKEPNPSQGPAL 107
A LK + + PAL
Sbjct: 76 ALKHLKGGSMLE-PAL 90
>UNIPROTKB|F8VYK6 [details] [associations]
symbol:TARBP2 "RISC-loading complex subunit TARBP2"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AC023509 HGNC:HGNC:11569
IPI:IPI01021485 ProteinModelPortal:F8VYK6 SMR:F8VYK6
Ensembl:ENST00000549679 ArrayExpress:F8VYK6 Bgee:F8VYK6
Uniprot:F8VYK6
Length = 88
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 33 NVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAAKV 91
++LQE + PVY+ K G++H P F V VG +GQG SKK A+ AA+V
Sbjct: 12 SLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGP-SKKAAKHKAAEV 69
Query: 92 AYMRLKEPNPSQGPAL 107
A LK + + PAL
Sbjct: 70 ALKHLKGGSMLE-PAL 84
>UNIPROTKB|F8VZZ7 [details] [associations]
symbol:TARBP2 "RISC-loading complex subunit TARBP2"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AC023509 HGNC:HGNC:11569
IPI:IPI01021911 ProteinModelPortal:F8VZZ7 SMR:F8VZZ7
Ensembl:ENST00000551741 ArrayExpress:F8VZZ7 Bgee:F8VZZ7
Uniprot:F8VZZ7
Length = 92
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 33 NVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAAKV 91
++LQE + PVY+ K G++H P F V VG +GQG SKK A+ AA+V
Sbjct: 12 SLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGP-SKKAAKHKAAEV 69
Query: 92 AYMRLKEPNPSQGPAL 107
A LK + + PAL
Sbjct: 70 ALKHLKGGSMLE-PAL 84
>TIGR_CMR|APH_1149 [details] [associations]
symbol:APH_1149 "ribonuclease III" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004525 "ribonuclease III
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
HAMAP:MF_00104 InterPro:IPR000999 InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 Pfam:PF00636 PROSITE:PS00517
PROSITE:PS50137 PROSITE:PS50142 SMART:SM00358 SMART:SM00535
InterPro:IPR014720 GO:GO:0005737 GO:GO:0046872 GO:GO:0006397
Gene3D:3.30.160.20 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0003725 GO:GO:0008033 GO:GO:0090305 GO:GO:0016075
GO:GO:0019843 GO:GO:0006364 GO:GO:0004525 Gene3D:1.10.1520.10
SUPFAM:SSF69065 eggNOG:COG0571 PANTHER:PTHR11207 KO:K03685
RefSeq:YP_505691.1 HSSP:Q9X0I6 ProteinModelPortal:Q2GIW0
STRING:Q2GIW0 GeneID:3930479 KEGG:aph:APH_1149 PATRIC:20951072
HOGENOM:HOG000246809 OMA:RACELPR ProtClustDB:PRK00102
BioCyc:APHA212042:GHPM-1155-MONOMER TIGRFAMs:TIGR02191
Uniprot:Q2GIW0
Length = 236
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 6 IELLRSMQRSQLSMMFTNQEDDSVL-YKNVLQELAQKEAYALPVYNT-KQSGESHAPTFV 63
+E +R + TN D + K LQE AQ +A+P Y +SG HAP F
Sbjct: 139 LESVRHFILQHWKPLATNLADTPLQDAKTALQEWAQGHNFAIPSYRLINKSGLEHAPVFT 198
Query: 64 STVEVGGEVFSGQGAKSKKQAEMSAAKVAYMRLKEPN 100
V V G+ G K KK AE++AAK+ ++ + N
Sbjct: 199 VEVTVNGQRVHATGCK-KKYAEIAAAKLMLEKVTKQN 234
>UNIPROTKB|F1MM26 [details] [associations]
symbol:ADARB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0004000 "adenosine deaminase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR002466 Pfam:PF00035 Pfam:PF02137
PROSITE:PS50137 PROSITE:PS50141 SMART:SM00358 SMART:SM00552
InterPro:IPR014720 GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.160.20
GO:GO:0006396 GO:GO:0004000 GO:GO:0003725
GeneTree:ENSGT00550000074412 KO:K13194 CTD:105 OMA:PNACQAH
EMBL:DAAA02036015 EMBL:DAAA02036016 EMBL:DAAA02036017
EMBL:DAAA02036018 IPI:IPI00695636 RefSeq:NP_001179517.1
UniGene:Bt.84294 PRIDE:F1MM26 Ensembl:ENSBTAT00000018870
GeneID:524061 KEGG:bta:524061 NextBio:20873877 Uniprot:F1MM26
Length = 734
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 28 SVLYKNVLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMS 87
SV KN L +L + L Q+G HAP F V+V G F G G +KK+A+M
Sbjct: 123 SVAPKNALVQLHELRP-GLQFRMVSQTGPVHAPIFAVAVDVNGLTFEGTGP-TKKKAKMR 180
Query: 88 AAKVAYMRLKE-PNPSQGPAL---VSPDIQA-QADYSSSSLQ 124
AA++A + PN Q P ++PD + QAD+ + Q
Sbjct: 181 AAELALRSFVQLPNAGQAPPAPGGMAPDFTSDQADFPDALFQ 222
>UNIPROTKB|F8VYK3 [details] [associations]
symbol:TARBP2 "RISC-loading complex subunit TARBP2"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 GO:GO:0005634 Gene3D:3.30.160.20 GO:GO:0003725
EMBL:AC023509 HGNC:HGNC:11569 IPI:IPI01021637
ProteinModelPortal:F8VYK3 SMR:F8VYK3 Ensembl:ENST00000549572
ArrayExpress:F8VYK3 Bgee:F8VYK3 Uniprot:F8VYK3
Length = 187
Score = 104 (41.7 bits), Expect = 0.00099, P = 0.00099
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 33 NVLQELAQKEAYALPVYNT-KQSGESHAPTFVSTVEVGGEVFSGQGAKSKKQAEMSAAKV 91
++LQE + PVY+ K G++H P F V VG +GQG SKK A+ AA+V
Sbjct: 12 SLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGP-SKKAAKHKAAEV 69
Query: 92 AYMRLKEPNPSQGPALVSPDIQAQADYS--SSSLQSNV 127
A LK G +++ P ++ + +S SSL ++
Sbjct: 70 ALKHLK------GGSMLEPALEDSSSFSPLDSSLPEDI 101
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.125 0.350 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 243 0.00097 113 3 11 23 0.37 34
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 603 (64 KB)
Total size of DFA: 176 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.25u 0.20s 20.45t Elapsed: 00:00:01
Total cpu time: 20.25u 0.20s 20.45t Elapsed: 00:00:01
Start: Sat May 11 05:56:31 2013 End: Sat May 11 05:56:32 2013