Query 024894
Match_columns 261
No_of_seqs 134 out of 972
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 08:15:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024894.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024894hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04513 Glycosylasparaginase G 100.0 2.2E-68 4.9E-73 480.0 25.5 197 1-247 64-263 (263)
2 PLN02689 Bifunctional isoaspar 100.0 2.5E-67 5.3E-72 485.0 26.1 219 1-250 86-309 (318)
3 KOG1593 Asparaginase [Amino ac 100.0 3.1E-67 6.7E-72 465.6 20.5 251 1-261 92-346 (349)
4 PRK10226 isoaspartyl peptidase 100.0 6.1E-66 1.3E-70 474.8 27.6 214 1-250 87-303 (313)
5 PLN02937 Putative isoaspartyl 100.0 2.3E-65 5.1E-70 485.7 29.0 252 1-258 91-387 (414)
6 COG1446 Asparaginase [Amino ac 100.0 4E-63 8.7E-68 448.2 20.4 222 1-254 82-303 (307)
7 cd04702 ASRGL1_like ASRGL1_lik 100.0 2E-62 4.2E-67 439.6 23.1 179 1-254 80-258 (261)
8 PF01112 Asparaginase_2: Aspar 100.0 7.2E-62 1.6E-66 450.4 19.1 221 1-250 85-305 (319)
9 cd04512 Ntn_Asparaginase_2_lik 100.0 2.2E-60 4.7E-65 424.8 21.9 172 1-247 77-248 (248)
10 cd04701 Asparaginase_2 L-Aspar 100.0 4.2E-60 9.1E-65 425.8 22.5 176 1-250 83-259 (260)
11 cd04703 Asparaginase_2_like A 100.0 1.9E-59 4.1E-64 417.9 20.1 173 1-246 73-245 (246)
12 KOG1592 Asparaginase [Amino ac 100.0 1.5E-57 3.2E-62 411.1 18.4 218 1-249 82-313 (326)
13 cd04514 Taspase1_like Taspase1 100.0 3.1E-56 6.6E-61 408.6 22.5 181 1-254 79-283 (303)
14 PF06267 DUF1028: Family of un 91.0 1.3 2.7E-05 38.8 7.9 91 127-236 2-94 (190)
15 PLN02180 gamma-glutamyl transp 88.9 3.6 7.8E-05 42.3 10.5 85 123-209 417-540 (639)
16 TIGR00066 g_glut_trans gamma-g 87.1 5.4 0.00012 39.8 10.3 84 123-208 341-454 (516)
17 PF01019 G_glu_transpept: Gamm 86.7 2.5 5.4E-05 42.1 7.7 86 121-208 322-442 (510)
18 PRK09615 ggt gamma-glutamyltra 76.9 14 0.00029 37.7 8.8 85 123-208 389-512 (581)
19 PLN02198 glutathione gamma-glu 76.0 19 0.00042 36.6 9.6 85 123-209 366-491 (573)
20 TIGR00315 cdhB CO dehydrogenas 67.9 6.7 0.00015 33.4 3.6 24 19-42 16-39 (162)
21 COG1504 Uncharacterized conser 62.1 17 0.00037 29.3 4.7 48 23-71 53-110 (121)
22 COG0405 Ggt Gamma-glutamyltran 55.5 63 0.0014 32.7 8.5 81 122-208 352-471 (539)
23 cd04702 ASRGL1_like ASRGL1_lik 53.9 14 0.0003 33.9 3.3 27 124-150 223-249 (261)
24 PLN02689 Bifunctional isoaspar 53.6 11 0.00024 35.5 2.8 26 125-150 279-304 (318)
25 PF00205 TPP_enzyme_M: Thiamin 53.2 14 0.00029 29.6 2.9 30 22-51 3-41 (137)
26 PRK00945 acetyl-CoA decarbonyl 52.7 15 0.00031 31.7 3.1 34 18-51 22-65 (171)
27 PF01935 DUF87: Domain of unkn 48.6 32 0.00069 29.7 4.7 44 170-237 25-68 (229)
28 PRK10226 isoaspartyl peptidase 44.1 25 0.00053 33.2 3.4 27 124-150 272-298 (313)
29 cd04512 Ntn_Asparaginase_2_lik 43.9 26 0.00057 31.9 3.5 26 124-149 220-245 (248)
30 PF06739 SBBP: Beta-propeller 41.8 58 0.0013 20.7 3.9 24 123-146 11-34 (38)
31 cd04513 Glycosylasparaginase G 41.3 29 0.00062 31.9 3.3 23 123-145 233-255 (263)
32 PF01112 Asparaginase_2: Aspar 41.2 27 0.00058 32.9 3.2 34 124-157 274-307 (319)
33 cd04703 Asparaginase_2_like A 41.0 24 0.00053 32.1 2.8 26 123-149 218-243 (246)
34 cd04701 Asparaginase_2 L-Aspar 38.6 30 0.00065 31.7 3.0 27 124-150 228-254 (260)
35 PF14382 ECR1_N: Exosome compl 37.0 25 0.00054 22.8 1.6 25 154-178 7-33 (39)
36 PRK03996 proteasome subunit al 33.6 99 0.0022 27.3 5.5 62 164-232 157-222 (241)
37 COG3342 Uncharacterized conser 33.5 69 0.0015 29.3 4.4 62 166-234 32-93 (265)
38 cd01912 proteasome_beta protea 29.4 2.2E+02 0.0048 23.7 6.7 62 163-231 118-184 (189)
39 cd03764 proteasome_beta_archea 29.2 2.2E+02 0.0048 23.8 6.7 62 163-231 117-183 (188)
40 PF07494 Reg_prop: Two compone 28.5 1.2E+02 0.0025 17.1 3.4 19 124-142 4-22 (24)
41 PRK06481 fumarate reductase fl 28.2 76 0.0016 31.3 4.2 40 35-77 375-414 (506)
42 cd03759 proteasome_beta_type_3 27.5 1.4E+02 0.0031 25.3 5.3 37 174-214 130-166 (195)
43 cd03762 proteasome_beta_type_6 26.5 2.5E+02 0.0054 23.5 6.6 62 163-231 117-183 (188)
44 PRK06134 putative FAD-binding 26.1 1.4E+02 0.0029 30.2 5.6 42 35-79 426-467 (581)
45 PRK15105 peptidoglycan synthas 24.5 1.7E+02 0.0036 29.8 5.9 42 201-242 238-280 (578)
46 cd03760 proteasome_beta_type_4 24.3 2.6E+02 0.0056 23.7 6.3 54 174-231 131-191 (197)
47 COG1446 Asparaginase [Amino ac 23.8 64 0.0014 30.3 2.5 23 220-242 175-197 (307)
48 PRK12845 3-ketosteroid-delta-1 23.8 1.3E+02 0.0028 30.4 4.9 42 35-79 421-462 (564)
49 TIGR03690 20S_bact_beta protea 22.7 1.3E+02 0.0029 26.2 4.3 38 174-215 133-170 (219)
50 TIGR01354 cyt_deam_tetra cytid 22.6 1.8E+02 0.0039 23.3 4.7 38 203-240 4-41 (127)
51 PRK12411 cytidine deaminase; P 22.3 1.3E+02 0.0028 24.6 3.8 39 204-242 8-46 (132)
52 PF14824 Sirohm_synth_M: Siroh 21.8 61 0.0013 20.0 1.3 16 135-150 2-17 (30)
53 PF05305 DUF732: Protein of un 21.6 1.5E+02 0.0032 22.2 3.9 26 186-211 46-71 (100)
54 PRK12837 3-ketosteroid-delta-1 21.5 94 0.002 30.7 3.4 42 35-79 372-413 (513)
55 TIGR03634 arc_protsome_B prote 21.4 3.8E+02 0.0082 22.3 6.7 44 164-214 119-162 (185)
56 PLN02402 cytidine deaminase 21.0 5.1E+02 0.011 24.4 7.9 51 191-241 12-67 (303)
57 TIGR00250 RNAse_H_YqgF RNAse H 20.7 3E+02 0.0064 22.2 5.6 48 20-67 37-104 (130)
58 PTZ00488 Proteasome subunit be 20.6 3E+02 0.0065 24.7 6.2 52 176-231 166-222 (247)
59 TIGR02214 spoVD_pbp stage V sp 20.6 1.8E+02 0.0038 29.8 5.2 42 201-242 220-262 (636)
No 1
>cd04513 Glycosylasparaginase Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.
Probab=100.00 E-value=2.2e-68 Score=480.01 Aligned_cols=197 Identities=59% Similarity=0.974 Sum_probs=188.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+|||++||+||||+||++||+++||+ +++|+|++++++|++|++..
T Consensus 64 MdG~~~~~GaV~~v~~vknPi~vAr~vme~t~h~~LvG~gA~~fA~~~G~~-~~~l~t~~~~~~~~~~~~~~-------- 134 (263)
T cd04513 64 MDGNTMRVGAVAALRGIKNAISVARAVMEHTKHTLLVGEGATRFAVSMGFP-EENLLTERSRKAWKKWLEEN-------- 134 (263)
T ss_pred EecCCCceEEEEecCCCCCHHHHHHHHHhhCCCeEEeCHHHHHHHHHcCCC-CCcCCCHHHHHHHHHHHhcC--------
Confidence 999999999999999999999999999999999999999999999999999 89999999999999998631
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
..|||||+||+|.+||||++|||||+++|+|||||||||
T Consensus 135 -----------------------------------------~~~dTVGaValD~~G~laaatSTGG~~~K~pGRVGDspi 173 (263)
T cd04513 135 -----------------------------------------CNHDTIGMIALDANGNIAAGTSTSGAAFKIPGRVGDSPI 173 (263)
T ss_pred -----------------------------------------CCCCCEEEEEEeCCCCEEEEECCCCccCccCCccCCCCC
Confidence 147999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhC--CCCeEEEEEEeCCCCEEEEEE
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKF--PDFVGAVVAINKNGEHAGACH 238 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~--~~~~gGvI~l~~~G~~~~~~~ 238 (261)
||||+|||++++||||||+||+|||+++|++|+++|++|++|++|++++|+++.+++ .++.+|+|+||++|+++++||
T Consensus 174 iGaG~yAd~~~~a~s~TG~GE~iir~~~A~~v~~~m~~G~~~~~A~~~~i~~~~~~~~~~~~~gg~Iavd~~G~~~~~~~ 253 (263)
T cd04513 174 PGAGAYADSEVGAAAATGDGEEMMRFLPSFQAVEYMRQGMSPKEACLEAIKRIAKHFDGPDFEGAVVALNKKGEYGAACN 253 (263)
T ss_pred CCceeeecCCceEEEeeccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCcCCCcEEEEEEcCCCCEEEEEc
Confidence 999999999999999999999999999999999999999999999999999998887 356799999999999999999
Q ss_pred cc-eeEEEEE
Q 024894 239 GW-TFKYSVR 247 (261)
Q Consensus 239 ~~-~f~~~~~ 247 (261)
+. .|+|.|+
T Consensus 254 ~~~~~~~~v~ 263 (263)
T cd04513 254 GLTEFTYAVS 263 (263)
T ss_pred cCCCEEEEeC
Confidence 98 8999874
No 2
>PLN02689 Bifunctional isoaspartyl peptidase/L-asparaginase
Probab=100.00 E-value=2.5e-67 Score=485.02 Aligned_cols=219 Identities=27% Similarity=0.350 Sum_probs=191.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHhCC-CCCC
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRENGC-QPNF 77 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~~~-~~~~ 77 (261)
|||+++++|||++|++|||||+|||+||++|||+||||+||++||+++||+. +++|+|++++++|++|++... +.++
T Consensus 86 MdG~~~~~GAV~~v~~vknPI~vAr~Vme~t~H~lLvG~GA~~fA~~~G~~~~~~~~l~t~~~~~~~~~~~~~~~~~~~~ 165 (318)
T PLN02689 86 MDGRTRRCGAVSGLTTVVNPISLARLVMEKTPHIYLAFDGAEAFARQQGVETVDNSYFITEENVERLKQAKEANSVQFDY 165 (318)
T ss_pred EeCCCCceEEEeecCCCCCHHHHHHHHHccCCCEEEEChHHHHHHHHcCCCcCCcccccCHHHHHHHHHHHHhccccccc
Confidence 9999999999999999999999999999999999999999999999999973 779999999999999997542 2332
Q ss_pred ccccCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceec
Q 024894 78 WKNVVPV-DGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVG 156 (261)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVG 156 (261)
+....++ +.|+++ ...+..||||||||+|.+|+|||||||||+++|+|||||
T Consensus 166 ~~~~~~~~~~~~~~---------------------------~~~~~~~dTVGaValD~~G~lAaaTSTGG~~~K~pGRVG 218 (318)
T PLN02689 166 RIPLDKPAKAAALA---------------------------ADGDAQPETVGCVAVDSDGNCAAATSTGGLVNKMVGRIG 218 (318)
T ss_pred ccCCCccccccccc---------------------------ccCCCCCCcEEEEEEeCCCCEEEEECCCCccCCCCcccC
Confidence 2211100 011111 123457899999999999999999999999999999999
Q ss_pred CCCccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEE
Q 024894 157 DGPIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAG 235 (261)
Q Consensus 157 Dspi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~ 235 (261)
||||||||+|||+ .+||||||+||+|||+++|++|+++|+ +|++|++|++.+|+++.+. +.+|+|+||++|++++
T Consensus 219 DSpiiGaG~yAd~-~~Avs~TG~GE~iir~~~A~~v~~~m~~~g~s~~~A~~~~i~~~~~~---~~gG~Iavd~~G~~~~ 294 (318)
T PLN02689 219 DTPIIGAGTYANH-LCAVSATGKGEAIIRGTVARDVAAVMEYKGLPLQEAVDYVIKERLPE---GPAGLIAVSATGEVAM 294 (318)
T ss_pred CCcccCCchhccC-CcEEeeecchHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhCcC---CceEEEEEcCCccEEE
Confidence 9999999999986 699999999999999999999999999 7999999999999876543 5689999999999999
Q ss_pred EEEcceeEEEEEcCC
Q 024894 236 ACHGWTFKYSVRSPE 250 (261)
Q Consensus 236 ~~~~~~f~~~~~~~~ 250 (261)
+|||+.|+|+|.+.+
T Consensus 295 ~~nt~~m~~a~~~~~ 309 (318)
T PLN02689 295 AFNTTGMFRACATED 309 (318)
T ss_pred EeCCcCeEEEEEeCC
Confidence 999999999998765
No 3
>KOG1593 consensus Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-67 Score=465.63 Aligned_cols=251 Identities=57% Similarity=0.913 Sum_probs=232.9
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||.+|++|||+.+|+||+.|.|||.||++|.|+|||||+|..||..+||+ .++|.|++++..|.+|++.+|||+||++
T Consensus 92 mDg~tM~VGAVa~lrrIkdai~vA~~Vleht~HTlLvGe~At~FA~smGf~-~e~Lst~es~~~~s~W~~~nCQPNfwkN 170 (349)
T KOG1593|consen 92 MDGDTMEVGAVADLRRIKDAIRVARHVLEHTQHTLLVGESATAFANSMGFK-EEDLSTEESKSWWSDWKAENCQPNFWKN 170 (349)
T ss_pred ecCCceeehhhhhHHHHHHHHHHHHHHHhhhheeeeecccHHHHHHhcCCC-ccccCCHHHHHHHHHHHHhcCCcchhcc
Confidence 899999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred cCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCC
Q 024894 81 VVPVD--GCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDG 158 (261)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDs 158 (261)
..||| +|+||+|+..+.+..--.+ .........+|||+|.|++|..|||+++|||.|..+|+||||||+
T Consensus 171 V~PDP~~sCGPYkp~~~~~~~~~~~~---------s~e~~vg~~nHDTIgM~vid~eghi~aGTStNGar~kipGRVGDs 241 (349)
T KOG1593|consen 171 VHPDPSSSCGPYKPNKLMRWDSLVNQ---------SDEYLVGPTNHDTIGMVVIDTEGHIAAGTSTNGARFKIPGRVGDS 241 (349)
T ss_pred cCCCccccCCCCCCCccccccccccc---------ccccccCCCCCCeeeEEEEeccCceeecccCCCceeecCCccCCC
Confidence 99999 7999998644333221000 011234677899999999999999999999999999999999999
Q ss_pred CccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEE
Q 024894 159 PIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACH 238 (261)
Q Consensus 159 pi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~ 238 (261)
||||+|.|||+++||+.+||+|+.+||+++++++++.||+|+.|.+|++++|.+|.+++++|.+.||++|..|.|+++|+
T Consensus 242 pIpGagAYAddevGaa~aTGdGDvmMRFLPs~~aVe~Mr~G~~P~eAa~~~i~RI~khfp~F~gAvia~n~~G~ygaaC~ 321 (349)
T KOG1593|consen 242 PIPGAGAYADDEVGAAAATGDGDVMMRFLPSYQAVEQMRAGKKPAEAAQKAISRILKHFPDFSGAVIAANVLGSYGAACY 321 (349)
T ss_pred CCCCccccccccccceeecCCchhHHHhhhHHHHHHHHHcCCChHHHHHHHHHHHHHhCccceeeEEEEeccCchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc--eeEEEEEcCCCCceEEEEeCC
Q 024894 239 GW--TFKYSVRSPEMEDVKVFTVLP 261 (261)
Q Consensus 239 ~~--~f~~~~~~~~~~~~~~~~~~~ 261 (261)
.. .|.|.+..++++++.++.|++
T Consensus 322 g~~~~F~ymV~~p~~~~v~~e~v~c 346 (349)
T KOG1593|consen 322 GINNKFGYMVSNPNLNPVRSEKVLC 346 (349)
T ss_pred ccccceeeEeeCCCCCCcceeEEee
Confidence 86 799999999999999999875
No 4
>PRK10226 isoaspartyl peptidase; Provisional
Probab=100.00 E-value=6.1e-66 Score=474.84 Aligned_cols=214 Identities=28% Similarity=0.427 Sum_probs=190.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHhCCCCCCc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRENGCQPNFW 78 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~~~~~~~~ 78 (261)
|||+++++|||++|++|||||+|||+||++|||+||||+||++||+++||+. +++|+|++++++|++|++..+..
T Consensus 87 MdG~t~~~GAV~~l~~vknPi~vAr~vme~t~hv~LvG~gA~~fA~~~G~~~~~~~~l~t~~~~~~~~~~~~~~~~~--- 163 (313)
T PRK10226 87 MDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFAHGMERVSPEIFSTPLRYEQLLAARAEGATV--- 163 (313)
T ss_pred EeCCCCceeEEEecCCCCCHHHHHHHHHhcCCCeEEEcHHHHHHHHHcCCCcCCcccccCHHHHHHHHHHHhhcccc---
Confidence 9999999999999999999999999999999999999999999999999983 56789999988888887653211
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCC
Q 024894 79 KNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDG 158 (261)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDs 158 (261)
.++... .......||||||||+|.+||+||+|||||+++|+|||||||
T Consensus 164 ----~~~~~~----------------------------~~~~~~~~dTVGaValD~~G~lAaaTSTGG~~~K~pGRVGDS 211 (313)
T PRK10226 164 ----LDHSGA----------------------------PLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDS 211 (313)
T ss_pred ----cccccC----------------------------ccccCCCCCCEEEEEEeCCCCEEEEECCCCccCCCCCccCCC
Confidence 000000 011234689999999999999999999999999999999999
Q ss_pred CccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCC-CCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEE
Q 024894 159 PIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQG-MGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGAC 237 (261)
Q Consensus 159 pi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g-~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~ 237 (261)
||||||+|||++++||||||+||+|||+++|++|+++|++| ++|++|++++|.++.++++ ..+|+|+||++|+++++|
T Consensus 212 pi~GAG~yAd~~~~A~s~TG~GE~iir~~~A~~v~~~m~~gg~~~~~A~~~~i~~~~~~~g-g~gG~Iavd~~G~~~~~~ 290 (313)
T PRK10226 212 PLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALG-GSGGLIAIDHEGNVALPF 290 (313)
T ss_pred CCcCCeeeecCCceEEEeeccHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcC-CceEEEEEcCCCCEEEEe
Confidence 99999999999999999999999999999999999999975 8999999999999887774 468999999999999999
Q ss_pred EcceeEEEEEcCC
Q 024894 238 HGWTFKYSVRSPE 250 (261)
Q Consensus 238 ~~~~f~~~~~~~~ 250 (261)
|+..|+++|.+.+
T Consensus 291 nt~~M~~~~~~~~ 303 (313)
T PRK10226 291 NTEGMYRAWGYAG 303 (313)
T ss_pred CCcccceEEEeCC
Confidence 9999999998765
No 5
>PLN02937 Putative isoaspartyl peptidase/L-asparaginase
Probab=100.00 E-value=2.3e-65 Score=485.70 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=199.3
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhh----------cCCCeEEecHHHHHHHHHCCCC-------CCCCCCcHHHHH
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQ----------HTEHTLLAGEKASAFAIAMGLP-------GPANLSSAESMD 63 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme----------~t~h~~LvG~gA~~fA~~~G~~-------~~~~l~t~~a~~ 63 (261)
|||+++++|||++|++|||||+|||+||+ ++||+||||+||++||+++||+ ++++|+|+++++
T Consensus 91 MDG~t~~~GAVaav~~VkNPI~vAr~Vme~~~~~~~~l~~t~HvlLvGeGA~~fA~~~G~~~~e~~~~~~~~L~T~~s~~ 170 (414)
T PLN02937 91 MDGDSGAFGAVGAVPGVRNAIQIAALLAKEQMMGSSLLGRIPPMFLVGEGARQWAKSKGIDLPETVEEAEKWLVTERAKE 170 (414)
T ss_pred EeCCCCceeEEEecCCCCCHHHHHHHHHHhhcccccccCCCCCeEEECHHHHHHHHHcCCCccccccCCcccccCHHHHH
Confidence 99999999999999999999999999976 8999999999999999999992 267999999999
Q ss_pred HHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CcccCCCCccCCCCCCceEEEEEcCCCCEEEE
Q 024894 64 KWTKWRENGCQPNFWKNVVPVDGCGPYQPKCNMGPSEGECPASNLM--GVTESGSSYVGLHSHDTISMAVIDKMGHVAVG 141 (261)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaa 141 (261)
+|++||+.+.+..... . +.++....-..+.......+... .+............|||||+||+|.+||||||
T Consensus 171 ~w~~~k~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaValD~~G~iAAa 244 (414)
T PLN02937 171 QWKKYKTMLASAIAKS--S----CDSQSTSKLSELEAPRSNPSNGTGGGQSSMCTASDEDCIMDTVGVICVDSEGNIASG 244 (414)
T ss_pred HHHHHHHhhhcccccc--c----cccccccccccccccccccccccccccccccccccCCCCCCCEEEEEEeCCCCEEEE
Confidence 9999998754321111 0 00110000000000000000000 00000001122357899999999999999999
Q ss_pred ecCCCCCCCcCceecCCCccCcceeeeCc-------eeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHHHHHHHHHHH
Q 024894 142 TSTNGATFKIPGRVGDGPIAGSSAYADEE-------VGACGATGDGDIMMRFLPCYQTVESMR-QGMGPELAAKDAISRI 213 (261)
Q Consensus 142 tSTGG~~~K~~GRVGDspi~GaG~yAd~~-------~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~A~~~ai~~~ 213 (261)
|||||+++|+|||||||||||||||||++ ++||||||+||+|||+++|++|+.+|+ .|++|++|++++|+++
T Consensus 245 TSTGG~~~K~pGRVGDSPIiGAG~yAdn~~~~g~~~~~a~saTG~GE~iiR~~~A~~~~~~~~~~g~~p~~Aa~~~i~~~ 324 (414)
T PLN02937 245 ASSGGIAMKVSGRVGLAAMYGSGCWASSKGPFGAPFIVGCCVSGAGEYLMRGFAARECCVSSSLSQAGPASACMKVLRSV 324 (414)
T ss_pred ECCCccccCCCCccCCCCCCCceeeecCccccccCceEEEeeeccHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998 799999999999999999999988886 7899999999999998
Q ss_pred HHhC----CCCeEEEEEEeCCC--------------CEEEEEEcceeEEEEEcCCCCceEEEE
Q 024894 214 ARKF----PDFVGAVVAINKNG--------------EHAGACHGWTFKYSVRSPEMEDVKVFT 258 (261)
Q Consensus 214 ~~~~----~~~~gGvI~l~~~G--------------~~~~~~~~~~f~~~~~~~~~~~~~~~~ 258 (261)
.+++ .+..+|||+||++| +++++|++++|.|+|+.+.|+++||.+
T Consensus 325 ~~~~~~~~~~~~gGvI~vd~~g~~~~~~nt~~m~~~e~~~a~~~~sf~~gy~~~~~~~~k~~~ 387 (414)
T PLN02937 325 IQGSSAKTTDKDAGILLVQADASVMAPGNSPSLKAVEIAAAYSSLSFGIGYFGSSMERPKVSI 387 (414)
T ss_pred HhhccccccCCceEEEEEeCCCCeecccCCcccccceeeeeeccCcceEEEecCcCcCCeEEE
Confidence 7752 34679999999975 788889999999999999999999965
No 6
>COG1446 Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-63 Score=448.22 Aligned_cols=222 Identities=31% Similarity=0.425 Sum_probs=198.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||.++++|||++|++|||||++||.||++|||+||+|+||.+||+++|||...++.|+++|..|++|++.....-.|+.
T Consensus 82 MdG~~~~aGaVa~v~~vk~Pi~~Ar~Vm~~t~hVll~G~gA~~fA~~~G~p~~~~~~t~~~r~~~~~~~~~~~~~~~~~~ 161 (307)
T COG1446 82 MDGATLRAGAVAAVEGVKNPILAARAVMEKTPHVLLVGEGAVAFAREMGLPREYDPFTEERRAEWLQAERDAKKQVLDHS 161 (307)
T ss_pred eeccccccceeeehhhccCHHHHHHHHHhCCCeEEEeccCHHHHHHHcCCCcCCCccchHHHHHHHHHhhhhhhcccchh
Confidence 99999999999999999999999999999999999999999999999999954788999999999999886542211110
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
.. +. ..+.+...|||||+||+|.+||||++|||||+++|++||||||||
T Consensus 162 ~~------~~-------------------------~~~~~~~~~gTVGaVAlD~~G~lAaaTSTGG~~~k~~GRVGDSPi 210 (307)
T COG1446 162 KT------YE-------------------------EPEDPDSKHGTVGAVALDADGNLAAATSTGGVFLKRPGRVGDSPI 210 (307)
T ss_pred hh------cc-------------------------cccCCcccCCceeEEEEeCCCcEEEEEccCccccCCCCccCCCCC
Confidence 00 00 012456779999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
|||||||++..+|+||||.||.|||.++|++|+.+|+.|.++++||++++++..+.+++. +|+|++|++|+++++||++
T Consensus 211 pGAG~ya~~~~~AvS~TG~GE~~ir~~~a~~i~~~~~~g~~l~~A~~~vv~~~~~~~g~~-~G~IavD~~G~v~~~~n~~ 289 (307)
T COG1446 211 PGAGFYAENGAGAVSCTGVGEVIIRNALAFDIAARVRYGLSLDAACERVVEEALKALGGD-GGLIAVDAKGNVAAAFNTK 289 (307)
T ss_pred CCCceeecCCcceeeccchhHHHHHHhHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc-CceEEEcCCCCeeecccch
Confidence 999999998789999999999999999999999999999999999999999988887654 9999999999999999999
Q ss_pred eeEEEEEcCCCCce
Q 024894 241 TFKYSVRSPEMEDV 254 (261)
Q Consensus 241 ~f~~~~~~~~~~~~ 254 (261)
.|.++|.+.+....
T Consensus 290 gm~~a~~~~~~~~~ 303 (307)
T COG1446 290 GMLRAWIKGGGIPT 303 (307)
T ss_pred hhhhheecCCCccc
Confidence 99999998775543
No 7
>cd04702 ASRGL1_like ASRGL1_like domains, a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.
Probab=100.00 E-value=2e-62 Score=439.62 Aligned_cols=179 Identities=35% Similarity=0.547 Sum_probs=171.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+||++|||+||||+||++||+++|
T Consensus 80 MdG~~~~~GaV~~v~~v~nPi~vAr~vme~t~H~lLvG~gA~~fA~~~G------------------------------- 128 (261)
T cd04702 80 MDGKTLRAGAVAAVRDIMNPISLARKVMEKTDHVLLVGEGAERFAREMG------------------------------- 128 (261)
T ss_pred EeCCCCceEEEEEcCCCCCHHHHHHHHHccCCCEEEEChHHHHHHHHcC-------------------------------
Confidence 9999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
|||||+||+|.+|+||++|||||+++|+|||||||||
T Consensus 129 -------------------------------------------~dTVGavalD~~G~laaatSTgG~~~K~~GRVGDspi 165 (261)
T cd04702 129 -------------------------------------------LGTVGAVALDASGNIAAATSTGGTTNKLVGRVGDTPL 165 (261)
T ss_pred -------------------------------------------CCceEEEEEeCCCCEEEEECCCCccCCCCCcCCCCCc
Confidence 3899999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
||||+|||++++||||||+||+|||+++|++++++|++|++|++|++++|+++.+++ ++.+|+|+||++|+++++||++
T Consensus 166 ~GaG~yAd~~~ga~s~TG~GE~iir~~~a~~v~~~m~~g~s~~eA~~~~i~~~~~~~-~g~gG~Iavd~~G~~~~a~nt~ 244 (261)
T cd04702 166 IGCGTYADNKVGAVSTTGHGESIMKVVLARLILDHMEQGGSAQEAADKAIEYMTERV-KGTGGAIVLDSSGEVGAAFNSK 244 (261)
T ss_pred CCCceeecCCceEEEeeccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc-CCceEEEEEeCCCCEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999998887 4569999999999999999999
Q ss_pred eeEEEEEcCCCCce
Q 024894 241 TFKYSVRSPEMEDV 254 (261)
Q Consensus 241 ~f~~~~~~~~~~~~ 254 (261)
.|+|+|.+.++..+
T Consensus 245 ~m~~a~~~~~~~~~ 258 (261)
T cd04702 245 RMAWAYAKDGQLHY 258 (261)
T ss_pred CceEEEEeCCeeEE
Confidence 99999998764333
No 8
>PF01112 Asparaginase_2: Asparaginase; InterPro: IPR000246 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Threonine peptidases are characterised by a threonine nucleophile at the N terminus of the mature enzyme. The threonine peptidases belong to clan PB or are unassigned, clan T-. The type example for this clan is the archaean proteasome beta component of Thermoplasma acidophilum. This group of sequences have a signature that places them in MEROPS peptidase family T2 (clan PB(T)). The glycosylasparaginases (3.5.1.26 from EC) are threonine peptidases. Also in this family is L-asparaginase (3.5.1.1 from EC), which catalyses the following reaction: L-asparagine + H2O = L-aspartate + NH3 Glycosylasparaginase catalyses: N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H(2)O = N-acetyl-beta-glucosaminylamine + L-aspartate cleaving the GlcNAc-Asn bond that links oligosaccharides to asparagine in N-linked glycoproteins. The enzyme is composed of two non-identical alpha/beta subunits joined by strong non-covalent forces and has one glycosylation site located in the alpha subunit [] and plays a major role in the degradation of glycoproteins.; GO: 0016787 hydrolase activity; PDB: 1APY_D 1APZ_C 2GEZ_E 2GL9_B 2GAC_D 2GAW_C 1AYY_A 1P4V_C 9GAF_A 1P4K_A ....
Probab=100.00 E-value=7.2e-62 Score=450.36 Aligned_cols=221 Identities=39% Similarity=0.573 Sum_probs=172.3
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+||++++|+||||+||++||+++||+ ..++.+..++++|++|++.+++++
T Consensus 85 Mdg~~~~~GaV~~v~~v~nPI~vAr~v~~~~~h~lLvG~gA~~fA~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~---- 159 (319)
T PF01112_consen 85 MDGDTLRFGAVAAVRGVKNPISVARKVMEQTPHVLLVGEGAEKFAKENGFE-LVDPESLITERRWEKWKKAKEQKR---- 159 (319)
T ss_dssp EETTTTEEEEEEEESSBS-HHHHHHHHHHHSS-SEEEHHHHHHHHHHTT---B--GGGHHHHHHHHHHHHHHHHHC----
T ss_pred EecCCcccceEEEecCCCCHHHHHHHHHHhcccceecchHHHHHHHhcCCc-ccccccchhhHHHHHHHHhhhhcc----
Confidence 899999999999999999999999999999999999999999999999999 788889999999999998765441
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
..+|++.. .+ ... . ........||||||||+|.+|++||||||||+++|+|||||||||
T Consensus 160 ~~~d~~~~--~~----~~~--------------~-~l~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~pGRVGdspi 218 (319)
T PF01112_consen 160 LIPDPSKS--QP----PVQ--------------D-YLDEEDSGHDTVGAVALDTNGNIAAATSTGGIFFKLPGRVGDSPI 218 (319)
T ss_dssp HBSSTTT----------------------------SEEBTTCTC--EEEEEEETTS-EEEEEEEE-STTB-TTEE-STTS
T ss_pred cccccccc--cc----ccc--------------c-ccccccccCCCeeEEEEECCCCEEEEecCCCccceecccccceee
Confidence 12221100 00 000 0 001122359999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
||||||||++++ |||||+||+|||+++|++|+++|++|+ +++++++++.+.++++...+|+|+||++|+++++||++
T Consensus 219 ~GaG~yAd~~~g-vs~TG~GE~iir~~lA~~i~~~~~~g~--~~a~~aa~~~i~~~~~~~~~GvIav~~~G~~~~~~n~~ 295 (319)
T PF01112_consen 219 IGAGFYADNEVG-VSCTGHGEDIIRTLLARRIVERMRDGM--QSAAEAAIKRIMEKFPRGTGGVIAVDKKGNIGIAFNSP 295 (319)
T ss_dssp TTTSEEEETTTE-EEEEE-HHHHHHTTHHHHHHHHHHTT---HHHHHHHHHHHHHHHHCTSEEEEEEETTS-EEEEESSS
T ss_pred cChhheeecccc-eeccCCHHHHHHhhHHHHHHHHhhhcc--HHHHHHHHHHHHHhCCCCceEEEEEcCCCCEEEEEecC
Confidence 999999999877 999999999999999999999999987 66777777777776656789999999999999999999
Q ss_pred eeEEEEEcCC
Q 024894 241 TFKYSVRSPE 250 (261)
Q Consensus 241 ~f~~~~~~~~ 250 (261)
.|+++|...+
T Consensus 296 ~m~~~~~~~~ 305 (319)
T PF01112_consen 296 GMFRYYAVQD 305 (319)
T ss_dssp CEEEEEEEEC
T ss_pred cceeeEEecC
Confidence 9886444444
No 9
>cd04512 Ntn_Asparaginase_2_like Ntn-hydrolase superfamily, L-Asparaginase type 2-like enzymes. This family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=100.00 E-value=2.2e-60 Score=424.77 Aligned_cols=172 Identities=38% Similarity=0.611 Sum_probs=166.0
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+|||+|||+||+|+||++||+++|
T Consensus 77 Mdg~~~~~GaV~~v~~v~nPi~vAr~vme~t~h~~LvG~gA~~fA~~~G------------------------------- 125 (248)
T cd04512 77 MDGKSLAFGAVAAIEGIKNPVSVARAVMEKTPHVLLVGEGALEFALDHG------------------------------- 125 (248)
T ss_pred EeCCCCceEEEEEcCCCCCHHHHHHHHHhcCCCeEEEChHHHHHHHHhC-------------------------------
Confidence 9999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
+||||+||+|.+|+||++|||||+++|+|||||||||
T Consensus 126 -------------------------------------------~dTVGavalD~~G~~aaatSTGG~~~K~pGRVGDspi 162 (248)
T cd04512 126 -------------------------------------------LDTVGAVALDGQGNLAAATSTGGMSLKLPGRVGDSPI 162 (248)
T ss_pred -------------------------------------------cCcEEEEEEeCCCCEEEEECCCcccCCCCCccCCCCc
Confidence 2899999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
||||+|||++++||||||+||+|||+++|++++++|++|++|++|++++|+++.++. ++.+|+|+||++|+++++||++
T Consensus 163 ~GaG~yAd~~~~a~s~TG~GE~iir~~~a~~v~~~~~~g~~~~~A~~~~i~~~~~~~-~~~~G~Ia~d~~G~~~~a~~~~ 241 (248)
T cd04512 163 IGAGFYADNEAGAASTTGHGEAIIRTVLARRVVELMEQGMAAQAAAETAVEELGSLK-GGQGGVIAVDSKGEFGAAFNTA 241 (248)
T ss_pred cCceeeecCCcEEEEeeecHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhc-CCeEEEEEEeCCCCEEEEECcC
Confidence 999999999999999999999999999999999999999999999999999998774 5679999999999999999999
Q ss_pred eeEEEEE
Q 024894 241 TFKYSVR 247 (261)
Q Consensus 241 ~f~~~~~ 247 (261)
.|+|+|.
T Consensus 242 ~m~~a~~ 248 (248)
T cd04512 242 GMTVAYH 248 (248)
T ss_pred CceEEeC
Confidence 9999874
No 10
>cd04701 Asparaginase_2 L-Asparaginase type 2. L-Asparaginase hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzyme undergoes an autoproteolytic cleavage into alpha and beta subunits to expose a threonine residue which becomes the N-terminal residue of the beta subunit. The threonine residue plays a central role in hydrolase activity. Some asparaginases can also hydrolyze L-glutamine and are termed glutaminase-asparaginase. This is a member of the Ntn-hydrolase superfamily.
Probab=100.00 E-value=4.2e-60 Score=425.76 Aligned_cols=176 Identities=36% Similarity=0.505 Sum_probs=168.4
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+||+++||+||+|+||++||+++| .
T Consensus 83 Mdg~~~~~GaV~~v~~v~nPi~vAr~vme~~~h~~LvG~gA~~fA~~~G-~----------------------------- 132 (260)
T cd04701 83 MDGRTLRAGAVAGLRRVKNPILLARAVMEKTPHVLLAGEGAEAFAREQG-K----------------------------- 132 (260)
T ss_pred EeCCCCceEEEEEcCCCCCHHHHHHHHHhcCCCeEEECHHHHHHHHHcC-C-----------------------------
Confidence 9999999999999999999999999999999999999999999999977 0
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
|||||+||+|.+|+||++|||||+++|+|||||||||
T Consensus 133 -------------------------------------------~dTVGavalD~~G~~aaatSTGG~~~K~pGRVGDSpi 169 (260)
T cd04701 133 -------------------------------------------HGTVGAVALDSHGNLAAATSTGGLTNKRPGRIGDTPI 169 (260)
T ss_pred -------------------------------------------CCcEEEEEEeCCCCEEEEECCCcccCCCCCccCCCCC
Confidence 6999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhC-CCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQ-GMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHG 239 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~-g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~ 239 (261)
||||+|||++.+||||||+||+|||+++|++++++|+. |++|++|++++|+++.++.+ ..+|+|+||++|+++++||+
T Consensus 170 ~GaG~yAd~~~~avs~TG~GE~iir~~~A~~v~~~~~~~g~~~~~A~~~~i~~~~~~~~-~~~GiIaid~~G~~~~~~nt 248 (260)
T cd04701 170 IGAGTYADNWSVAVSCTGTGEYFIRVAAAHDVAARVRYAGLSLADAAEAVIGEVLETLG-GDGGLIAVDARGNVAMPFNT 248 (260)
T ss_pred CCceeeecCCcEEEEeecchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcC-CceEEEEEcCCccEEEEeCC
Confidence 99999999999999999999999999999999999996 89999999999999988764 56899999999999999999
Q ss_pred ceeEEEEEcCC
Q 024894 240 WTFKYSVRSPE 250 (261)
Q Consensus 240 ~~f~~~~~~~~ 250 (261)
+.|+|+|++.+
T Consensus 249 ~~m~~a~~~~~ 259 (260)
T cd04701 249 GGMYRGWISED 259 (260)
T ss_pred CccEEEEEcCC
Confidence 99999998753
No 11
>cd04703 Asparaginase_2_like A subfamily of the L-Asparaginase type 2-like enzymes. The wider family, a member of the Ntn-hydrolase superfamily, includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=100.00 E-value=1.9e-59 Score=417.94 Aligned_cols=173 Identities=35% Similarity=0.455 Sum_probs=164.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+ +++|||++|++|||||+|||+|||+|||+||||+||++||+++||+ +
T Consensus 73 Mdg~-~~~GaV~~v~~vknPi~vAr~vme~t~h~lLvG~gA~~fA~~~G~~-~--------------------------- 123 (246)
T cd04703 73 MTSD-GDFGAVAAMQGVEHPVLVARAVMEETPHVLLAGDGAVKFAALTGVE-D--------------------------- 123 (246)
T ss_pred EeCC-CCeeEEEEcCCCCCHHHHHHHHHhcCCCeEEECHHHHHHHHHhCCC-C---------------------------
Confidence 8997 8999999999999999999999999999999999999999999998 1
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
...|||||+||+|. |++|++|||||+++|+|||||||||
T Consensus 124 ----------------------------------------~~~~dTVG~valD~-G~laaatSTGG~~~K~pGRVGDspi 162 (246)
T cd04703 124 ----------------------------------------PGGHDTVGAVARDG-GRLAAATSTGGRWPALAGRVGDVPQ 162 (246)
T ss_pred ----------------------------------------CCCCCCEEEEEEEC-CCEEEEECCCcccCCCCCccCCCCC
Confidence 01279999999999 9999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
||||+|||+ .+||||||+||+|||+++|++++++|++|++|++|++++|+++.++. ++.+|+|+||+ |+++++|||+
T Consensus 163 ~GaG~yAd~-~gavs~TG~GE~iir~~~A~~v~~~~~~g~~~~~A~~~~i~~~~~~~-~~~~G~Iavd~-G~~~~~~~s~ 239 (246)
T cd04703 163 PGAGFYAGP-RGAVSATGAGEAIARNTLARSAYNRLGTGDPAQDAAKAAISRFSEAT-GVTAGVIAVDP-EEEGAAYSSA 239 (246)
T ss_pred CCccccccC-CceEEeeecHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhc-CCceEEEEECC-CceEEEeCch
Confidence 999999997 59999999999999999999999999999999999999999998875 56799999999 9999999999
Q ss_pred eeEEEE
Q 024894 241 TFKYSV 246 (261)
Q Consensus 241 ~f~~~~ 246 (261)
.|.|+|
T Consensus 240 ~m~~a~ 245 (246)
T cd04703 240 AMQTAV 245 (246)
T ss_pred hhhhhc
Confidence 999987
No 12
>KOG1592 consensus Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-57 Score=411.15 Aligned_cols=218 Identities=28% Similarity=0.452 Sum_probs=194.3
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhc--------CCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHH
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQH--------TEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRE 70 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~--------t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~ 70 (261)
|||++++||||++|++|||||+|||.||++ +||+||||+||++||+++|++. +..|+|+++|.+|.+||+
T Consensus 82 MDGksl~fGaV~~vs~V~nPi~lAr~lm~k~~~~~~griPp~~Lvg~GAe~~A~~~G~~~v~~~~lvTe~~~~~~~~~Ke 161 (326)
T KOG1592|consen 82 MDGKSLRFGAVGAVSCVKNPISLARLLMEKQWWGSLGRIPPCFLVGEGAEKFALAHGVETVPPQHLVTERNRFTLKKFKE 161 (326)
T ss_pred ecCCCccceeeccccccCCHHHHHHHHHhccccccccCCCceEEechHHHHHHHHcCCcccCCcceecHhHHHHHhhhHH
Confidence 999999999999999999999999999999 8999999999999999999973 778999999999999999
Q ss_pred hCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 71 NGCQPNFWKNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
.+.+.. + ++.+++ +.. ........||||+||+|.+||+|++|||||+.+|
T Consensus 162 ~~~~~~-------~----~~~~~~--~~~-----------------~~~~~~~~dTVGaV~vD~~Gnia~gtSSGGi~lK 211 (326)
T KOG1592|consen 162 FLQQVP-------A----PFFPRT--EVP-----------------ETCFDSSLDTVGAVCVDGEGNIAAGTSSGGIVLK 211 (326)
T ss_pred HHhccc-------c----cccccc--ccC-----------------CcccccccCcceEEEEeCCCCEEEEeccCCeecc
Confidence 876532 1 111110 000 1123567899999999999999999999999999
Q ss_pred cCceecCCCccCcceeeeC---ceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHHHHHHHHHHHHHhCCCCeEEEEE
Q 024894 151 IPGRVGDGPIAGSSAYADE---EVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPELAAKDAISRIARKFPDFVGAVVA 226 (261)
Q Consensus 151 ~~GRVGDspi~GaG~yAd~---~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~A~~~ai~~~~~~~~~~~gGvI~ 226 (261)
+||||||||++||||||+| ..+|||+||+||+|||+.+||+|+..|+ +|.++++|++..+..+..+. ++.+|+|+
T Consensus 212 ~~GRiG~sp~yGaG~wA~~~~~~~~avstTG~GE~l~r~~lAR~~~~~l~~~gl~~~~a~~~~~~~~~~~~-dg~~Gli~ 290 (326)
T KOG1592|consen 212 MPGRIGDSPIYGAGTWAENTSERTCAVSTTGHGESLMRTNLAREISTLLEYQGLSLEEAADYVLRPLLARE-DGTGGLIV 290 (326)
T ss_pred ccCcccCCcccCccccccCCCcceEEEecCCCcHHHHHHHHHHHHHHHHHhcccCHHHHHHhhhhhhhhhc-cCcccEEE
Confidence 9999999999999999998 7999999999999999999999999999 99999999999999887765 67899999
Q ss_pred EeCCCCEEEEEEcceeEEEEEcC
Q 024894 227 INKNGEHAGACHGWTFKYSVRSP 249 (261)
Q Consensus 227 l~~~G~~~~~~~~~~f~~~~~~~ 249 (261)
|.++|.+..-|++..|.|+|.+.
T Consensus 291 v~~~~~~~~~f~s~~m~w~~~t~ 313 (326)
T KOG1592|consen 291 VSASGDVVAPFTSTGMAWAYATE 313 (326)
T ss_pred EEecCCeecccCcchhhhhhhcc
Confidence 99999999999999898888773
No 13
>cd04514 Taspase1_like Taspase1_like domains; Taspase1 catalyzes the cleavage of the mix lineage leukemia (MLL) nuclear protein and transcription factor TFIIA. Taspase1 is a threonine aspartase, a member of the Ntn hydrolase superfamily and the type 2 asparaginase family. A threonine residue acts as the active site nucleophile in both endopeptidease and protease activities to cleave polypeptide substrates after an aspartate residue. The Taspase1 proenzyme undergoes autoproteolysis into alpha and beta subunits. The N-terminal residue of the beta subunit is a threonine which is the active catalytic residue. The active enzyme is a heterotetramer.
Probab=100.00 E-value=3.1e-56 Score=408.65 Aligned_cols=181 Identities=24% Similarity=0.318 Sum_probs=167.7
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcC----------CCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHH
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHT----------EHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRE 70 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t----------~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~ 70 (261)
|||+++++|||++|++|||||+|||+||+++ ||+||||+||++||+++||
T Consensus 79 Mdg~~~~~GaV~~v~~vknPI~lAr~vme~~~~~~~~~g~~~h~~LvG~gA~~fA~~~G~-------------------- 138 (303)
T cd04514 79 MDGKTLRFGAVGAVSGVKNPISLARRLLEEQSKGPLSLGRIPPDFLVGEGARQWAKSHGI-------------------- 138 (303)
T ss_pred EeCCCCceEEEEEcCCCCCHHHHHHHHHHhCcccccccCCCCceEEEcHHHHHHHHHhCC--------------------
Confidence 9999999999999999999999999999988 7999999999999998875
Q ss_pred hCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 71 NGCQPNFWKNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
+|||||||+|.+|++|++|||||+++|
T Consensus 139 -----------------------------------------------------~dTVGaValD~~G~~aaatSTGG~~~K 165 (303)
T cd04514 139 -----------------------------------------------------LDTVGAVCVDKEGNIAAGVSSGGIALK 165 (303)
T ss_pred -----------------------------------------------------CCCEEEEEEeCCCCEEEEECCCcccCC
Confidence 399999999999999999999999999
Q ss_pred cCceecCCCccCcceeeeCce------eEEeccCchHHHHhhhhHHHHHHHHhCCC-CHHHHHHHHHHHHHHh--CCCCe
Q 024894 151 IPGRVGDGPIAGSSAYADEEV------GACGATGDGDIMMRFLPCYQTVESMRQGM-GPELAAKDAISRIARK--FPDFV 221 (261)
Q Consensus 151 ~~GRVGDspi~GaG~yAd~~~------~A~s~TG~GE~iir~~lA~~i~~~~~~g~-s~~~A~~~ai~~~~~~--~~~~~ 221 (261)
+|||||||||||||+|||++. +||||||+||+|||+++|++|+++|+++. ++++|++++|.++..+ ..+..
T Consensus 166 ~pGRVGDspi~GaG~yAd~~~~~~~~~~a~s~TG~GE~iir~~~A~~v~~~~~~~~~~~~~A~~~~i~~~~~~~~~~~~~ 245 (303)
T cd04514 166 HPGRVGQAATYGCGCWASKGDPFTPTSVAVSTSGCGEHLIRTQLARECAERLYLSDCSLEQSLQKSFQEKFFNSPELKKL 245 (303)
T ss_pred CCCccCCcCcCCcEEEeccCCcccCceEEEEeeccHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcccccCCc
Confidence 999999999999999999976 99999999999999999999999999864 9999999999886542 12467
Q ss_pred EEEEEEeC-----CCCEEEEEEcceeEEEEEcCCCCce
Q 024894 222 GAVVAINK-----NGEHAGACHGWTFKYSVRSPEMEDV 254 (261)
Q Consensus 222 gGvI~l~~-----~G~~~~~~~~~~f~~~~~~~~~~~~ 254 (261)
+|+|+||+ +|+++++|||++|+|+|.+...+++
T Consensus 246 ~G~I~v~~~~~~~~g~~~~~~nt~~M~~a~~~~~~p~~ 283 (303)
T cd04514 246 AGAIVVRAEVKTGNVEILWGHTTPSMCVGYMSGQKPKT 283 (303)
T ss_pred eEEEEEEeccccCcEEEEEEeCCchheeeEEcCCCCee
Confidence 99999999 8999999999999999998773333
No 14
>PF06267 DUF1028: Family of unknown function (DUF1028); InterPro: IPR010430 This is a family of bacterial and archaeal proteins with unknown function.; PDB: 2IMH_A.
Probab=90.96 E-value=1.3 Score=38.82 Aligned_cols=91 Identities=15% Similarity=0.202 Sum_probs=54.5
Q ss_pred eEEEEEcCC-CCEEEEecCCCCCCCcCceecCCCccCcc-eeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHH
Q 024894 127 ISMAVIDKM-GHVAVGTSTNGATFKIPGRVGDGPIAGSS-AYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPEL 204 (261)
Q Consensus 127 VGaVa~D~~-G~iAaatSTGG~~~K~~GRVGDspi~GaG-~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~ 204 (261)
--.|++|.. |.+-.|++|+-+.. |+= -|+...+|++++=+ +..-.+.....++|++|.+|++
T Consensus 2 fSIvArdp~tg~~GvAvaS~~~aV------------Ga~vp~~~~gvGavaTQ~----~tnp~~g~~~L~ll~~G~~a~~ 65 (190)
T PF06267_consen 2 FSIVARDPETGQFGVAVASSSPAV------------GARVPWARAGVGAVATQA----YTNPRLGPRGLDLLEAGLSAEE 65 (190)
T ss_dssp EEEEEE-TTT--EEEEEEESSS-H------------HHHHEEEETTTEEEEEES----SS--HHHHHHHHHHHTT--HHH
T ss_pred eEEEEEcCCCCcEEEEEEecCccc------------ccccccccCCcCEEEecc----cCCHHHHHHHHHHHHcCCCHHH
Confidence 346788864 88888888875542 321 26666677776654 3455567788999999999999
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEE
Q 024894 205 AAKDAISRIARKFPDFVGAVVAINKNGEHAGA 236 (261)
Q Consensus 205 A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~ 236 (261)
+++..++.= .....--+.+||.+|+.+.+
T Consensus 66 al~~l~~~D---~~~~~RQ~~vvd~~G~~a~~ 94 (190)
T PF06267_consen 66 ALAALLAAD---PGREYRQLAVVDAQGRTAAF 94 (190)
T ss_dssp HHHHHHHT----TTGGG-EEEEEETTS-EEEE
T ss_pred HHHHHHhcC---CCcccccEEEECCCCCeEEE
Confidence 988877531 11122456679999987554
No 15
>PLN02180 gamma-glutamyl transpeptidase 4
Probab=88.85 E-value=3.6 Score=42.30 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=53.0
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCCC-----------cCceecCCCccC----------cce----------------
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATFK-----------IPGRVGDGPIAG----------SSA---------------- 165 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~K-----------~~GRVGDspi~G----------aG~---------------- 165 (261)
.+||+-..++|.+|+.++.|+|=+..|- +--|..|-.+.+ .-.
T Consensus 417 ~~~TTh~SVvD~dGnaVS~T~Si~~~FGSgvv~p~tGi~lNN~m~~Fs~~~~~n~~gl~p~~~N~i~PGKRP~ssmsPtI 496 (639)
T PLN02180 417 DQGTSHFCIVDADRNSVSMTSTVNYGFGAGVLSPSTGIVLNNEMDDFSTPAEITPDMLPPAPTNFIEPNKRPLSSMTPLV 496 (639)
T ss_pred CCCCeEEEEEcCCCCEEEEecccCCCcCCeEEeCCceeEEcCcccccCCCcccccccCCCCCcCcCCCCCCccccCCCeE
Confidence 4699999999999999999998443321 112333322221 000
Q ss_pred -eeeC-ceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHH
Q 024894 166 -YADE-EVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDA 209 (261)
Q Consensus 166 -yAd~-~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~a 209 (261)
.-+. ...++.+.| |..|.... ++.+...+..|++|++|+..-
T Consensus 497 v~~~g~~~lalGs~G-G~~I~~av-~Qviln~l~~Gm~lq~AI~aP 540 (639)
T PLN02180 497 ITKDGEFVAALGGAG-GMHIIPAV-LQVFLNCFVLNMKPKEAVESA 540 (639)
T ss_pred EEeCCcEEEEEECCC-hHHHHHHH-HHHHHHHHhCCCCHHHHHhcC
Confidence 0011 133455555 77766555 778888888999999988743
No 16
>TIGR00066 g_glut_trans gamma-glutamyltranspeptidase. Also called gamma-glutamyltranspeptidase (ggt). Some members of this family have antibiotic synthesis or resistance activities. In the case of a cephalosporin acylase from Pseudomonas sp., the enzyme was shown to retain some gamma-glutamyltranspeptidase activity. Other, more distantly related proteins have ggt-related activities and score below the trusted cutoff.
Probab=87.09 E-value=5.4 Score=39.85 Aligned_cols=84 Identities=19% Similarity=0.217 Sum_probs=50.6
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCCC-----------cCceecCCCc-cCcceee-----------------eCc-ee
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATFK-----------IPGRVGDGPI-AGSSAYA-----------------DEE-VG 172 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~K-----------~~GRVGDspi-~GaG~yA-----------------d~~-~~ 172 (261)
.+||.-.+++|.+|+.++.|+|=+..|- +-.|.+|-.+ +|.-.+. +++ .-
T Consensus 341 ~~~TTh~svvD~dGnaVs~t~Si~~~FGSg~~~~~tGi~lNN~~~~F~~~p~~~N~~~PgKRP~stmsP~iv~~~~~~~l 420 (516)
T TIGR00066 341 GSQTTHFSVVDRDGNAVSLTTTINLEFGSGVHAPDTGILLNNEMDDFSLKPGGANAVEPNKRPLSSMAPTIVLKDGKPDL 420 (516)
T ss_pred CCCCEEEEEEcCCCCEEEEEeccCCCCCCeEEeCCceEEEcccccccCCCCCCCCcCCCCCccccccCcceEEECCceEE
Confidence 4699999999999999999999544331 1122222111 1110000 111 22
Q ss_pred EEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHH
Q 024894 173 ACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKD 208 (261)
Q Consensus 173 A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ 208 (261)
++.+. |=.-|....++.++..+..|++|++|+..
T Consensus 421 ~~Gs~--GG~~i~~~~~qvl~~~l~~gm~l~~AI~a 454 (516)
T TIGR00066 421 VVGSP--GGSRIITTVLQTIVRHIDYGMPLAEAVSE 454 (516)
T ss_pred EEeCC--CchHHHHHHHHHHHHHHHcCCCHHHHHhc
Confidence 22222 44455667777888888899999998864
No 17
>PF01019 G_glu_transpept: Gamma-glutamyltranspeptidase; InterPro: IPR000101 Gamma-glutamyltranspeptidase (2.3.2.2 from EC) (GGT) [] catalyzes the transfer of the gamma-glutamyl moiety of glutathione to an acceptor that may be an amino acid, a peptide or water (forming glutamate). GGT plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione and drug and xenobiotic detoxification []. In prokaryotes and eukaryotes, it is an enzyme that consists of two polypeptide chains, a heavy and a light subunit, processed from a single chain precursor by an autocatalytic cleavage. The active site of GGT is known to be located in the light subunit. The sequences of mammalian and bacterial GGT show a number of regions of high similarity []. Pseudomonas cephalosporin acylases (3.5.1 from EC) that convert 7-beta-(4-carboxybutanamido)-cephalosporanic acid (GL-7ACA) into 7-aminocephalosporanic acid (7ACA) and glutaric acid are evolutionary related to GGT and also show some GGT activity []. Like GGT, these GL-7ACA acylases, are also composed of two subunits. As an autocatalytic peptidase GGT belongs to MEROPS peptidase family T3 (gamma-glutamyltransferase family, clan PB(T)). The active site residue for members of this family and family T1 is C-terminal to the autolytic cleavage site. The type example is gamma-glutamyltransferase 1 from Escherichia coli. ; GO: 0003840 gamma-glutamyltransferase activity; PDB: 2DBX_A 2Z8K_D 2Z8I_B 2DBU_D 2E0X_B 2DBW_B 2E0W_B 2DG5_A 2E0Y_C 2Z8J_C ....
Probab=86.66 E-value=2.5 Score=42.08 Aligned_cols=86 Identities=24% Similarity=0.251 Sum_probs=50.8
Q ss_pred CCCCCceEEEEEcCCCCEEEEecCCCCCCCc-----------CceecCCC------ccCcceeee---------------
Q 024894 121 LHSHDTISMAVIDKMGHVAVGTSTNGATFKI-----------PGRVGDGP------IAGSSAYAD--------------- 168 (261)
Q Consensus 121 ~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~-----------~GRVGDsp------i~GaG~yAd--------------- 168 (261)
...+||...+++|.+||+.+.|+|-+..|-- -.|.++-. .++.-.+..
T Consensus 322 ~~~~~Tth~svvD~~Gn~Vs~t~Si~~~FGSg~~~p~tG~~lNn~~~~F~~~~~~~~~~~~N~~~PgkRp~st~~P~iv~ 401 (510)
T PF01019_consen 322 PDDGDTTHFSVVDKDGNAVSLTQSIGSPFGSGVVVPGTGFLLNNRMSDFSPNPFGLDPGHPNALAPGKRPLSTMSPTIVF 401 (510)
T ss_dssp G-TTEEEEEEEEETTS-EEEEEEEESSTTTTSEBETTTTEBE--GGGGSB--TTSSSTTSTTB--TT-B--B----EEEE
T ss_pred cCCCCceeeeeECCCCCEEEeccccCCCCCccEecCcccccccccCcccccCccCCCCCCCCccccCCCCCccccceeEE
Confidence 3578999999999999999999998764421 11221111 010000000
Q ss_pred --Cc-eeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHH
Q 024894 169 --EE-VGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKD 208 (261)
Q Consensus 169 --~~-~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ 208 (261)
++ ..++.+.| |..| -...++.++..+..|++|++|+..
T Consensus 402 ~~g~~~l~~Gs~G-G~~i-~~~~~qvl~~~l~~g~~l~~AI~a 442 (510)
T PF01019_consen 402 KDGKPVLAIGSPG-GDRI-PQAVAQVLLNYLDFGMDLQEAIAA 442 (510)
T ss_dssp ETTEEEEEEEEES-GGGH-HHHHHHHHHHHHTTSS-HHHHHHS
T ss_pred ecCCccEEeeccc-cccc-chhHHhhhhhhhcCCCChhhhhcC
Confidence 01 33555566 6666 455666788888899999998853
No 18
>PRK09615 ggt gamma-glutamyltranspeptidase; Reviewed
Probab=76.89 E-value=14 Score=37.71 Aligned_cols=85 Identities=22% Similarity=0.212 Sum_probs=51.7
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCC-----------CcCceecCCCc-cCcce-----------ee------------
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATF-----------KIPGRVGDGPI-AGSSA-----------YA------------ 167 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~-----------K~~GRVGDspi-~GaG~-----------yA------------ 167 (261)
.+||.-.+++|.+||.++.|+|=+..| -+--|..|-.+ +|.-. ++
T Consensus 389 ~~~TTh~sVvD~~GnaVS~T~Si~~~FGSgv~~pgtGi~lNN~m~~Fs~~pg~~n~~g~~~~~~N~i~PGKRP~stmsPt 468 (581)
T PRK09615 389 SNQTTHFSVVDKDGNAVAVTYTLNTTFGTGIVAGNSGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPT 468 (581)
T ss_pred CCCCEEEEEEcCCCCEEEEEcccCcCcCceEEeCCceeEEcCcccccCCCCCCCccccCCCCCcCcCCCCCcccccCCCe
Confidence 469999999999999999999833322 12224444322 33200 00
Q ss_pred ----eCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHH
Q 024894 168 ----DEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKD 208 (261)
Q Consensus 168 ----d~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ 208 (261)
+++.-.+-.|. |=.-|...+++.++..+..|++|++|+..
T Consensus 469 iv~~~g~~~la~Gs~-GG~~i~~a~~qvi~n~l~~gm~l~~AV~a 512 (581)
T PRK09615 469 IVVKDGKTWLVTGSP-GGSRIITTVLQMVVNSIDYGMNVAEATNA 512 (581)
T ss_pred EEEECCcEEEEEECC-CchHHHHHHHHHHHHHHhCCCCHHHHHhC
Confidence 11111222233 33445566677888888899999999863
No 19
>PLN02198 glutathione gamma-glutamylcysteinyltransferase
Probab=76.03 E-value=19 Score=36.55 Aligned_cols=85 Identities=20% Similarity=0.186 Sum_probs=51.8
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCC-----------CcCceecCCCccCc--c----------eee------------
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATF-----------KIPGRVGDGPIAGS--S----------AYA------------ 167 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~-----------K~~GRVGDspi~Ga--G----------~yA------------ 167 (261)
.+||....++|.+|+..+.|+|=+..| -+--|.+|-.+.+- | .+.
T Consensus 366 ~~~TTh~sVvD~dGnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~~F~~~~~~~~~~~~~~~~~~N~i~PGKRP~ssmsP 445 (573)
T PLN02198 366 DHGTSHLSIIDSERNAVSMTSTINGYFGALMLSPSTGIVLNNEMDDFSIPMKSGGNLDVPPPAPANFIRPGKRPLSSMTP 445 (573)
T ss_pred CCCCEEEEEECCCCCEEEEeeccCCCCCCeEEeCCCceEEecCccccCCCCCCCCcccccCCCCCCcCCCCCcccccCCC
Confidence 369999999999999999999844322 22234444333221 1 000
Q ss_pred -----eCc-eeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHH
Q 024894 168 -----DEE-VGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDA 209 (261)
Q Consensus 168 -----d~~-~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~a 209 (261)
+.+ ..++.+. |=.-|....++.++..+..|++|++|+..-
T Consensus 446 tIv~~~g~~~l~lGa~--GG~~i~~a~~qvi~~~l~~gm~l~~AI~aP 491 (573)
T PLN02198 446 TIVLKDGKVKAAVGAS--GGANIIAGTTEVYLNHFFLKMDPLSSVLAP 491 (573)
T ss_pred eEEEECCcEEEEEECC--CchhHHHHHHHHHHHHHhCCCCHHHHHhcC
Confidence 111 1222222 334455666778888888999999988743
No 20
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. Nomenclature follows the description for Methanosarcina thermophila. The complex is also found in Archaeoglobus fulgidus, not considered a methanogen, but is otherwise generally associated with methanogenesis.
Probab=67.93 E-value=6.7 Score=33.41 Aligned_cols=24 Identities=13% Similarity=0.148 Sum_probs=21.1
Q ss_pred cHHHHHHHHhhcCCCeEEecHHHH
Q 024894 19 DGIRAARLVMQHTEHTLLAGEKAS 42 (261)
Q Consensus 19 nPI~lAr~Vme~t~h~~LvG~gA~ 42 (261)
.|-.++..+.+-.+|++|+|.|+.
T Consensus 16 ~p~~aa~lLk~AKRPvIivG~ga~ 39 (162)
T TIGR00315 16 SPKLVAMMIKRAKRPLLIVGPENL 39 (162)
T ss_pred CHHHHHHHHHcCCCcEEEECCCcC
Confidence 698999999888899999998873
No 21
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=62.13 E-value=17 Score=29.27 Aligned_cols=48 Identities=15% Similarity=0.323 Sum_probs=38.0
Q ss_pred HHHHHhhcCCCeEEecH----------HHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHh
Q 024894 23 AARLVMQHTEHTLLAGE----------KASAFAIAMGLPGPANLSSAESMDKWTKWREN 71 (261)
Q Consensus 23 lAr~Vme~t~h~~LvG~----------gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~ 71 (261)
=++.+++..|-+++||- -|.+|-++.|.+ -..+.|+++-++|.+.+.+
T Consensus 53 Ele~~lee~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~-vi~~pT~EAikr~nel~~~ 110 (121)
T COG1504 53 ELEELLEEGPEVIVVGTGQSGMLELSEEAREFFRKKGCE-VIELPTPEAIKRYNELRGK 110 (121)
T ss_pred HHHHHHhcCCcEEEEecCceeEEEeCHHHHHHHHhcCCe-EEEeCCHHHHHHHHHHhcc
Confidence 36778888888888874 578999999976 4556799999999987653
No 22
>COG0405 Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism]
Probab=55.49 E-value=63 Score=32.73 Aligned_cols=81 Identities=21% Similarity=0.251 Sum_probs=51.5
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeCc-------------------------------
Q 024894 122 HSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADEE------------------------------- 170 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~~------------------------------- 170 (261)
..+||+-..++|++||..+.|+|--..|-- |-+ ++|.|+--+|+
T Consensus 352 e~~~Tth~svvD~~GnaVS~t~Si~~~FGS-gv~----vpgtG~~LNN~m~dFs~~p~~~~~~~~N~i~PgKRP~sSmaP 426 (539)
T COG0405 352 ESGGTTHFSVVDKEGNAVSFTQSINLGFGS-GVV----VPGTGILLNNRMDDFSLKPGHPNFGDANAVEPGKRPLSSMAP 426 (539)
T ss_pred CCCCCEEEEEEcCCCCEEEEEEecccccCC-eee----cCCcceEEecCCCccccCCCCCCCCCcccCCCCCcCccccCc
Confidence 358999999999999999999998444321 111 12223222221
Q ss_pred --------eeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHH
Q 024894 171 --------VGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKD 208 (261)
Q Consensus 171 --------~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ 208 (261)
..-+--|-=|..|+... ...|+..+..||+|++|+..
T Consensus 427 tiv~k~g~~~~~~GspGG~~i~~~v-lq~i~~~id~gm~~q~Ai~~ 471 (539)
T COG0405 427 TIVLKDGKPVMVLGSPGGSRIPQTV-LQTIVNVIDYGMNPQEAIDA 471 (539)
T ss_pred eEEEECCcEEEEEeCCCcccchHHH-HHHHHHHHhCCCCHHHHHhc
Confidence 22123344456665554 55888889999999999864
No 23
>cd04702 ASRGL1_like ASRGL1_like domains, a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.
Probab=53.94 E-value=14 Score=33.94 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=23.7
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
.++.|.|++|.+|+++++.+|.++.+-
T Consensus 223 ~g~gG~Iavd~~G~~~~a~nt~~m~~a 249 (261)
T cd04702 223 KGTGGAIVLDSSGEVGAAFNSKRMAWA 249 (261)
T ss_pred CCceEEEEEeCCCCEEEEeCCCCceEE
Confidence 467899999999999999999987753
No 24
>PLN02689 Bifunctional isoaspartyl peptidase/L-asparaginase
Probab=53.62 E-value=11 Score=35.47 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=24.1
Q ss_pred CceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 125 DTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 125 dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
++.|.|++|.+|+++++.+|.|+.+-
T Consensus 279 ~~gG~Iavd~~G~~~~~~nt~~m~~a 304 (318)
T PLN02689 279 GPAGLIAVSATGEVAMAFNTTGMFRA 304 (318)
T ss_pred CceEEEEEcCCccEEEEeCCcCeEEE
Confidence 78999999999999999999999854
No 25
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=53.20 E-value=14 Score=29.56 Aligned_cols=30 Identities=33% Similarity=0.517 Sum_probs=23.8
Q ss_pred HHHHHHhhcCCCeEEecHHHH---------HHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKAS---------AFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA~---------~fA~~~G~~ 51 (261)
.++.++.+-..|++|+|.++. +||+..|+|
T Consensus 3 ~~~~~L~~A~rP~il~G~g~~~~~a~~~l~~lae~~~~P 41 (137)
T PF00205_consen 3 EAADLLSSAKRPVILAGRGARRSGAAEELRELAEKLGIP 41 (137)
T ss_dssp HHHHHHHH-SSEEEEE-HHHHHTTCHHHHHHHHHHHTSE
T ss_pred HHHHHHHhCCCEEEEEcCCcChhhHHHHHHHHHHHHCCC
Confidence 467788888899999999987 788888887
No 26
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=52.72 E-value=15 Score=31.67 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=26.9
Q ss_pred ccHHHHHHHHhhcCCCeEEecHHHHH----------HHHHCCCC
Q 024894 18 KDGIRAARLVMQHTEHTLLAGEKASA----------FAIAMGLP 51 (261)
Q Consensus 18 knPI~lAr~Vme~t~h~~LvG~gA~~----------fA~~~G~~ 51 (261)
-.|-.++..+.+-.+|++|+|.|+.. ||+..++|
T Consensus 22 ~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iP 65 (171)
T PRK00945 22 VSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIP 65 (171)
T ss_pred cCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCC
Confidence 36989999999888999999987743 56666665
No 27
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=48.57 E-value=32 Score=29.72 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=30.1
Q ss_pred ceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEE
Q 024894 170 EVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGAC 237 (261)
Q Consensus 170 ~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~ 237 (261)
+++=...||.|. +.+++.+++.+.+ + ....+|++|.+|+|....
T Consensus 25 H~~I~G~TGsGK----S~~~~~ll~~l~~-----------------~---~~~~~ii~D~~GEY~~~~ 68 (229)
T PF01935_consen 25 HIAIFGTTGSGK----SNTVKVLLEELLK-----------------K---KGAKVIIFDPHGEYASLF 68 (229)
T ss_pred eEEEECCCCCCH----HHHHHHHHHHHHh-----------------c---CCCCEEEEcCCCcchhhh
Confidence 466788999995 4555555544432 1 124889999999998776
No 28
>PRK10226 isoaspartyl peptidase; Provisional
Probab=44.06 E-value=25 Score=33.16 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=23.6
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
.++.|.|++|.+|+++++.+|.|+..-
T Consensus 272 gg~gG~Iavd~~G~~~~~~nt~~M~~~ 298 (313)
T PRK10226 272 GGSGGLIAIDHEGNVALPFNTEGMYRA 298 (313)
T ss_pred CCceEEEEEcCCCCEEEEeCCcccceE
Confidence 456799999999999999999999644
No 29
>cd04512 Ntn_Asparaginase_2_like Ntn-hydrolase superfamily, L-Asparaginase type 2-like enzymes. This family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=43.86 E-value=26 Score=31.90 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=23.2
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATF 149 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~ 149 (261)
..+.|.|++|.+|+.+.+.+|.++.+
T Consensus 220 ~~~~G~Ia~d~~G~~~~a~~~~~m~~ 245 (248)
T cd04512 220 GGQGGVIAVDSKGEFGAAFNTAGMTV 245 (248)
T ss_pred CCeEEEEEEeCCCCEEEEECcCCceE
Confidence 46789999999999999999988764
No 30
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=41.78 E-value=58 Score=20.66 Aligned_cols=24 Identities=29% Similarity=0.333 Sum_probs=19.4
Q ss_pred CCCceEEEEEcCCCCEEEEecCCC
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNG 146 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG 146 (261)
..+..-.|++|.+||+=.+.+|.|
T Consensus 11 ~~~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 11 AQDYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred CceeEEEEEECCCCCEEEEEeecC
Confidence 357789999999999877776665
No 31
>cd04513 Glycosylasparaginase Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.
Probab=41.30 E-value=29 Score=31.92 Aligned_cols=23 Identities=9% Similarity=0.070 Sum_probs=20.7
Q ss_pred CCCceEEEEEcCCCCEEEEecCC
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTN 145 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTG 145 (261)
..++.|.|++|.+|++++++++.
T Consensus 233 ~~~~gg~Iavd~~G~~~~~~~~~ 255 (263)
T cd04513 233 PDFEGAVVALNKKGEYGAACNGL 255 (263)
T ss_pred CCCcEEEEEEcCCCCEEEEEccC
Confidence 36789999999999999999887
No 32
>PF01112 Asparaginase_2: Asparaginase; InterPro: IPR000246 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Threonine peptidases are characterised by a threonine nucleophile at the N terminus of the mature enzyme. The threonine peptidases belong to clan PB or are unassigned, clan T-. The type example for this clan is the archaean proteasome beta component of Thermoplasma acidophilum. This group of sequences have a signature that places them in MEROPS peptidase family T2 (clan PB(T)). The glycosylasparaginases (3.5.1.26 from EC) are threonine peptidases. Also in this family is L-asparaginase (3.5.1.1 from EC), which catalyses the following reaction: L-asparagine + H2O = L-aspartate + NH3 Glycosylasparaginase catalyses: N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H(2)O = N-acetyl-beta-glucosaminylamine + L-aspartate cleaving the GlcNAc-Asn bond that links oligosaccharides to asparagine in N-linked glycoproteins. The enzyme is composed of two non-identical alpha/beta subunits joined by strong non-covalent forces and has one glycosylation site located in the alpha subunit [] and plays a major role in the degradation of glycoproteins.; GO: 0016787 hydrolase activity; PDB: 1APY_D 1APZ_C 2GEZ_E 2GL9_B 2GAC_D 2GAW_C 1AYY_A 1P4V_C 9GAF_A 1P4K_A ....
Probab=41.20 E-value=27 Score=32.90 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=26.1
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCcCceecC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGD 157 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGD 157 (261)
.+++|.|++|.+|+++.+.+|.++..-....-|+
T Consensus 274 ~~~~GvIav~~~G~~~~~~n~~~m~~~~~~~~~~ 307 (319)
T PF01112_consen 274 RGTGGVIAVDKKGNIGIAFNSPGMFRYYAVQDGT 307 (319)
T ss_dssp CTSEEEEEEETTS-EEEEESSSCEEEEEEEECTC
T ss_pred CCceEEEEEcCCCCEEEEEecCcceeeEEecCCc
Confidence 3999999999999999999999998523333333
No 33
>cd04703 Asparaginase_2_like A subfamily of the L-Asparaginase type 2-like enzymes. The wider family, a member of the Ntn-hydrolase superfamily, includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=40.99 E-value=24 Score=32.09 Aligned_cols=26 Identities=12% Similarity=0.070 Sum_probs=23.1
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCC
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATF 149 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~ 149 (261)
...+.|.|++|. |+++++.+|-++.+
T Consensus 218 ~~~~~G~Iavd~-G~~~~~~~s~~m~~ 243 (246)
T cd04703 218 TGVTAGVIAVDP-EEEGAAYSSAAMQT 243 (246)
T ss_pred cCCceEEEEECC-CceEEEeCchhhhh
Confidence 357899999999 99999999988875
No 34
>cd04701 Asparaginase_2 L-Asparaginase type 2. L-Asparaginase hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzyme undergoes an autoproteolytic cleavage into alpha and beta subunits to expose a threonine residue which becomes the N-terminal residue of the beta subunit. The threonine residue plays a central role in hydrolase activity. Some asparaginases can also hydrolyze L-glutamine and are termed glutaminase-asparaginase. This is a member of the Ntn-hydrolase superfamily.
Probab=38.64 E-value=30 Score=31.74 Aligned_cols=27 Identities=22% Similarity=0.215 Sum_probs=23.8
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFK 150 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K 150 (261)
..+.|.|++|.+|+++.+.+|.++.+-
T Consensus 228 ~~~~GiIaid~~G~~~~~~nt~~m~~a 254 (260)
T cd04701 228 GGDGGLIAVDARGNVAMPFNTGGMYRG 254 (260)
T ss_pred CCceEEEEEcCCccEEEEeCCCccEEE
Confidence 367899999999999999999998753
No 35
>PF14382 ECR1_N: Exosome complex exonuclease RRP4 N-terminal region; PDB: 2NN6_I 3M7N_C 2BA1_A 3M85_C.
Probab=37.00 E-value=25 Score=22.78 Aligned_cols=25 Identities=20% Similarity=0.434 Sum_probs=17.9
Q ss_pred eecCCC--ccCcceeeeCceeEEeccC
Q 024894 154 RVGDGP--IAGSSAYADEEVGACGATG 178 (261)
Q Consensus 154 RVGDsp--i~GaG~yAd~~~~A~s~TG 178 (261)
|+|.+. ++|.|+|.++...=+|.+|
T Consensus 7 ~l~~~~e~~~G~GTY~~~g~I~asv~G 33 (39)
T PF14382_consen 7 RLGSSEEYMPGHGTYVRDGNIYASVAG 33 (39)
T ss_dssp EEEETTTSEESTTEEEETTEEEESSSE
T ss_pred EeecCCCEecCCCEEEeCCEEEEEeeE
Confidence 556654 7999999998655555555
No 36
>PRK03996 proteasome subunit alpha; Provisional
Probab=33.62 E-value=99 Score=27.28 Aligned_cols=62 Identities=16% Similarity=0.112 Sum_probs=38.4
Q ss_pred ceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCC----CeEEEEEEeCCCC
Q 024894 164 SAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPD----FVGAVVAINKNGE 232 (261)
Q Consensus 164 G~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~----~~gGvI~l~~~G~ 232 (261)
|.|-.. -.+++|.|..+++..|=+ ..+..++.+||++.+++-+.....+ ...=|.+++++|.
T Consensus 157 G~~~~~---~~~a~G~g~~~~~~~Le~----~~~~~~s~eeai~l~~~al~~~~~~~~~~~~i~i~ii~~~~~ 222 (241)
T PRK03996 157 GAYLEY---KATAIGAGRDTVMEFLEK----NYKEDLSLEEAIELALKALAKANEGKLDPENVEIAYIDVETK 222 (241)
T ss_pred CCeecc---eEEEECCCcHHHHHHHHH----hcccCCCHHHHHHHHHHHHHHHhccCCCCCcEEEEEEECCCC
Confidence 555432 246789999998877664 3456789999988887755443221 1122334566664
No 37
>COG3342 Uncharacterized conserved protein [Function unknown]
Probab=33.48 E-value=69 Score=29.32 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=41.8
Q ss_pred eeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEE
Q 024894 166 YADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHA 234 (261)
Q Consensus 166 yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~ 234 (261)
|+...+||+++- .+....+-..+.++|++|.++.+|+..+++.=.++ ...+.| ++|.+|+..
T Consensus 32 ~~~a~~GAvATQ----s~an~~~G~~gld~L~~G~~~~eal~~ll~~d~~~-~~RQvg--vV~~~G~a~ 93 (265)
T COG3342 32 WAKAGVGAVATQ----SYANPALGSAGLDLLAQGLAAEEALAQLLNSDDER-ELRQVG--VVDQKGRAA 93 (265)
T ss_pred ccccCcceeeee----hhcccccchHHHHHHHccCCHHHHHHHHHccCcch-hheeee--EEcCCCcee
Confidence 777667777553 44455566688999999999999999888642211 123455 478888653
No 38
>cd01912 proteasome_beta proteasome beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=29.37 E-value=2.2e+02 Score=23.68 Aligned_cols=62 Identities=19% Similarity=0.075 Sum_probs=37.8
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH---h--CCCCeEEEEEEeCCC
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR---K--FPDFVGAVVAINKNG 231 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~---~--~~~~~gGvI~l~~~G 231 (261)
.|.|.... +.++|.|..+++..|-+. .+..++.++|.+.+++-+.. + ..+...=|.+++++|
T Consensus 118 ~G~~~~~~---~~a~G~~~~~~~~~Le~~----~~~~~s~~ea~~~~~~~l~~~~~~d~~~~~~~~v~vi~~~g 184 (189)
T cd01912 118 LGSLIEAP---FVATGSGSKYAYGILDRG----YKPDMTLEEAVELVKKAIDSAIERDLSSGGGVDVAVITKDG 184 (189)
T ss_pred CCCeEecC---EEEEcccHHHHHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHhcCccCCcEEEEEECCCC
Confidence 45565543 456899999988766543 34568899888777654432 2 112223444567776
No 39
>cd03764 proteasome_beta_archeal Archeal proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme for non-lysosomal protein degradation in both the cytosol and the nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are both members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=29.15 E-value=2.2e+02 Score=23.84 Aligned_cols=62 Identities=26% Similarity=0.193 Sum_probs=37.7
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHH---HHh--CCCCeEEEEEEeCCC
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRI---ARK--FPDFVGAVVAINKNG 231 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~---~~~--~~~~~gGvI~l~~~G 231 (261)
.|.|-... +.++|.|..++...|=+. .+..++++||.+.+++-+ .++ ..+...=|..++++|
T Consensus 117 ~G~~~~~~---~~a~G~g~~~~~~~L~~~----~~~~~~~~ea~~l~~~~l~~~~~rd~~~~~~i~i~iv~~~g 183 (188)
T cd03764 117 LGSIIEDK---YTATGSGSPYAYGVLEDE----YKEDMTVEEAKKLAIRAIKSAIERDSASGDGIDVVVITKDG 183 (188)
T ss_pred CCCEEEcC---EEEEcCcHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHhhcCCCCCcEEEEEECCCC
Confidence 45565543 557899998887665432 346789998887766544 332 222333445567776
No 40
>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats. These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=28.47 E-value=1.2e+02 Score=17.10 Aligned_cols=19 Identities=26% Similarity=0.352 Sum_probs=15.7
Q ss_pred CCceEEEEEcCCCCEEEEe
Q 024894 124 HDTISMAVIDKMGHVAVGT 142 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaat 142 (261)
...|-+++.|++|+|=.+|
T Consensus 4 ~n~I~~i~~D~~G~lWigT 22 (24)
T PF07494_consen 4 NNNIYSIYEDSDGNLWIGT 22 (24)
T ss_dssp SSCEEEEEE-TTSCEEEEE
T ss_pred CCeEEEEEEcCCcCEEEEe
Confidence 5789999999999997776
No 41
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=28.19 E-value=76 Score=31.34 Aligned_cols=40 Identities=23% Similarity=0.476 Sum_probs=26.2
Q ss_pred EEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCC
Q 024894 35 LLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNF 77 (261)
Q Consensus 35 ~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~ 77 (261)
+..++--+++|.++|++ ++.| ..+-.+|.++-+....++|
T Consensus 375 ~~kadTleeLA~~~gid-~~~L--~~tv~~yN~~~~~g~D~~f 414 (506)
T PRK06481 375 VEEGKTIDELAKKINVP-AETL--TKTLDTWNKAVKNKKDEAF 414 (506)
T ss_pred EEEcCCHHHHHHHhCCC-HHHH--HHHHHHHHHHHhcCCCccc
Confidence 44566677899999987 5555 4556677777666544444
No 42
>cd03759 proteasome_beta_type_3 proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=27.49 E-value=1.4e+02 Score=25.31 Aligned_cols=37 Identities=11% Similarity=0.014 Sum_probs=26.4
Q ss_pred EeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024894 174 CGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA 214 (261)
Q Consensus 174 ~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~ 214 (261)
.+++|.|.++++..|=+. .+..++.+||.+.+++-|.
T Consensus 130 ~~a~G~g~~~~~~~Le~~----~~~~~s~~ea~~l~~~~l~ 166 (195)
T cd03759 130 FVVSGTASEQLYGMCESL----WRPDMEPDELFETISQALL 166 (195)
T ss_pred EEEEcccHHHHHHHHHhc----cCCCCCHHHHHHHHHHHHH
Confidence 557899999988765432 3467899998877766443
No 43
>cd03762 proteasome_beta_type_6 proteasome beta type-6 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=26.52 E-value=2.5e+02 Score=23.50 Aligned_cols=62 Identities=18% Similarity=0.135 Sum_probs=37.2
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH---h--CCCCeEEEEEEeCCC
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR---K--FPDFVGAVVAINKNG 231 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~---~--~~~~~gGvI~l~~~G 231 (261)
.|+|... ..+++|.|..+++..|=+ ..+.+++.+||.+-+++-+.. + +.+...=+..++++|
T Consensus 117 ~G~~~~~---~~~~~G~g~~~~~~~Le~----~~~~~~s~~ea~~l~~~al~~~~~rd~~~~~~~~i~~i~~~g 183 (188)
T cd03762 117 GGMLIRQ---PFAIGGSGSTYIYGYVDA----NYKPGMTLEECIKFVKNALSLAMSRDGSSGGVIRLVIITKDG 183 (188)
T ss_pred CCCEEec---CEEEEcccHHHHHHHHHh----cCCCCCCHHHHHHHHHHHHHHHHHhccccCCCEEEEEECCCC
Confidence 3555554 256789998888876543 234678999988777655433 2 122223344566666
No 44
>PRK06134 putative FAD-binding dehydrogenase; Reviewed
Probab=26.15 E-value=1.4e+02 Score=30.20 Aligned_cols=42 Identities=26% Similarity=0.533 Sum_probs=28.9
Q ss_pred EEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcc
Q 024894 35 LLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWK 79 (261)
Q Consensus 35 ~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~ 79 (261)
++.++--+++|.++|++ .+.| ..+-++|.++-+....++|.+
T Consensus 426 ~~kadTleELA~~~gid-~~~L--~~Tv~~yN~~~~~G~D~dFgr 467 (581)
T PRK06134 426 LKRGASLEELARACGID-PDGL--EATVARYNRHARNGQDPDFGR 467 (581)
T ss_pred EEecCCHHHHHHHcCCC-HHHH--HHHHHHHHHHHhcCCCcccCC
Confidence 45677888899999887 5444 456677887777665555543
No 45
>PRK15105 peptidoglycan synthase FtsI; Provisional
Probab=24.50 E-value=1.7e+02 Score=29.77 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
.+|++++++|++..+......+.+|++|. +|++-+..+.++|
T Consensus 238 ~lQ~~ae~~l~~~~~~~~~~~ga~Vvmdp~TG~ILAmas~P~~ 280 (578)
T PRK15105 238 RLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSY 280 (578)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEEECCCCcEEEEecCCCC
Confidence 47778888887654444444678899996 6998777676644
No 46
>cd03760 proteasome_beta_type_4 proteasome beta type-4 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis.Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=24.33 E-value=2.6e+02 Score=23.72 Aligned_cols=54 Identities=17% Similarity=-0.010 Sum_probs=32.9
Q ss_pred EeccCchHHHHhhhhHHHHHHHHhC--CCCHHHHHHHHH---HHHHHhC--CCCeEEEEEEeCCC
Q 024894 174 CGATGDGDIMMRFLPCYQTVESMRQ--GMGPELAAKDAI---SRIARKF--PDFVGAVVAINKNG 231 (261)
Q Consensus 174 ~s~TG~GE~iir~~lA~~i~~~~~~--g~s~~~A~~~ai---~~~~~~~--~~~~gGvI~l~~~G 231 (261)
+.++|.|..++...|-+. ... .++.+||.+-++ ..+.++. .+...=|.+++++|
T Consensus 131 ~~a~G~g~~~~~~~Le~~----~~~~~~ms~eea~~l~~~~l~~~~~rd~~~~~~~~i~ii~~~g 191 (197)
T cd03760 131 HVATGFGAYLALPLLREA----WEKKPDLTEEEARALIEECMKVLYYRDARSINKYQIAVVTKEG 191 (197)
T ss_pred EeEEccHHHHHHHHHHhh----cCCCCCCCHHHHHHHHHHHHHHHHHhccccCCceEEEEECCCC
Confidence 346799999998877533 344 789999865554 4444432 22223344567766
No 47
>COG1446 Asparaginase [Amino acid transport and metabolism]
Probab=23.83 E-value=64 Score=30.32 Aligned_cols=23 Identities=22% Similarity=0.130 Sum_probs=19.6
Q ss_pred CeEEEEEEeCCCCEEEEEEccee
Q 024894 220 FVGAVVAINKNGEHAGACHGWTF 242 (261)
Q Consensus 220 ~~gGvI~l~~~G~~~~~~~~~~f 242 (261)
.+.|.+++|.+|+++.+++|-.+
T Consensus 175 gTVGaVAlD~~G~lAaaTSTGG~ 197 (307)
T COG1446 175 GTVGAVALDADGNLAAATSTGGV 197 (307)
T ss_pred CceeEEEEeCCCcEEEEEccCcc
Confidence 36899999999999999888643
No 48
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=23.81 E-value=1.3e+02 Score=30.42 Aligned_cols=42 Identities=14% Similarity=0.376 Sum_probs=30.3
Q ss_pred EEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcc
Q 024894 35 LLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWK 79 (261)
Q Consensus 35 ~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~ 79 (261)
+..++--+++|+++|++ ++.| ..+-++|.++-+....++|.+
T Consensus 421 ~~kadTleELA~k~gid-~~~L--~~TV~~yN~~~~~G~D~dFgr 462 (564)
T PRK12845 421 AHRADSLADLARKIGVP-VDTF--VATMRRFNEMAAAGVDSDFGR 462 (564)
T ss_pred eEecCCHHHHHHHcCCC-HHHH--HHHHHHHHHHHhcCCCCCCCC
Confidence 55778888999999998 5544 567788888877665555543
No 49
>TIGR03690 20S_bact_beta proteasome, beta subunit, bacterial type. Members of this family are the beta subunit of the 20S proteasome as found in Actinobacteria such as Mycobacterium, Rhodococcus, and Streptomyces. In Streptomyces, maturation during proteasome assembly was shown to remove a 53-amino acid propeptide. Most of the length of the propeptide is not included in this model.
Probab=22.67 E-value=1.3e+02 Score=26.18 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=27.8
Q ss_pred EeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 024894 174 CGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR 215 (261)
Q Consensus 174 ~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~ 215 (261)
+.++|.|+.+++..|=+ ..+..++.+||.+.+++-|..
T Consensus 133 ~~a~G~g~~~a~~~Le~----~~~~~ms~eeai~l~~~al~~ 170 (219)
T TIGR03690 133 YHAVGSGSVFAKGALKK----LYSPDLDEDDALRVAVEALYD 170 (219)
T ss_pred eEEEeccHHHHHHHHHh----cCCCCcCHHHHHHHHHHHHHH
Confidence 45789999999877653 334678999998887765543
No 50
>TIGR01354 cyt_deam_tetra cytidine deaminase, homotetrameric. This small, homotetrameric zinc metalloprotein is found in humans and most bacteria. A related, homodimeric form with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine.
Probab=22.59 E-value=1.8e+02 Score=23.31 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 203 ELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 203 ~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
.+++.+++++-..-|.++..|.++++.+|++-..+|..
T Consensus 4 ~~~a~~a~~~ay~PyS~~~vgAa~~~~~G~i~~G~n~e 41 (127)
T TIGR01354 4 FKAAQEARKNAYAPYSNFKVGAALLTKDGRIFTGVNVE 41 (127)
T ss_pred HHHHHHHHHhcCCCcCCCeEEEEEEeCCCCEEEEEeec
Confidence 34445455432223456778888899999988787765
No 51
>PRK12411 cytidine deaminase; Provisional
Probab=22.28 E-value=1.3e+02 Score=24.57 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEccee
Q 024894 204 LAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGWTF 242 (261)
Q Consensus 204 ~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~~f 242 (261)
+++.++++.-..-|..+.+|..+++.+|++-..+|-...
T Consensus 8 ~~a~~~~~~ay~pyS~~~VgAa~~t~~G~i~~G~nvEn~ 46 (132)
T PRK12411 8 QEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENA 46 (132)
T ss_pred HHHHHHHHhcCCCccCCceEEEEEeCCCCEEEEEEeecC
Confidence 344444443222345677899999999998877776643
No 52
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=21.84 E-value=61 Score=19.99 Aligned_cols=16 Identities=31% Similarity=0.491 Sum_probs=9.5
Q ss_pred CCCEEEEecCCCCCCC
Q 024894 135 MGHVAVGTSTNGATFK 150 (261)
Q Consensus 135 ~G~iAaatSTGG~~~K 150 (261)
+|.+..+.||+|..-+
T Consensus 2 ~g~LqI~ISTnG~sP~ 17 (30)
T PF14824_consen 2 RGPLQIAISTNGKSPR 17 (30)
T ss_dssp -TTEEEEEEESSS-HH
T ss_pred CCCeEEEEECCCCChH
Confidence 4667777777776543
No 53
>PF05305 DUF732: Protein of unknown function (DUF732); InterPro: IPR007969 This entry represents several uncharacterised Mycobacterium tuberculosis proteins of unknown function.
Probab=21.56 E-value=1.5e+02 Score=22.23 Aligned_cols=26 Identities=12% Similarity=0.187 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHhCCCCHHHHHHHHHH
Q 024894 186 FLPCYQTVESMRQGMGPELAAKDAIS 211 (261)
Q Consensus 186 ~~lA~~i~~~~~~g~s~~~A~~~ai~ 211 (261)
..+++.+|..|++|.++.+.+.....
T Consensus 46 i~~g~~vC~~l~~G~~~~~v~~~v~~ 71 (100)
T PF05305_consen 46 IALGHAVCDQLDSGTSPEQVVDAVQA 71 (100)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 56789999999999998887776554
No 54
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional
Probab=21.50 E-value=94 Score=30.75 Aligned_cols=42 Identities=14% Similarity=0.415 Sum_probs=29.6
Q ss_pred EEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcc
Q 024894 35 LLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWK 79 (261)
Q Consensus 35 ~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~ 79 (261)
++.++--+++|.++|++ ++.| ..+-++|.+.-+....++|.+
T Consensus 372 ~~kaDTleELA~k~gid-~~~L--~~Tv~~yN~~~~~g~D~dFgr 413 (513)
T PRK12837 372 WRTADTLEELAAKIGVP-ADAL--TATVARFNGFAAAGVDEDFGR 413 (513)
T ss_pred eeecCCHHHHHHHcCCC-HHHH--HHHHHHHHHHHhcCCCccCCC
Confidence 45678889999999987 5555 556778877777655555543
No 55
>TIGR03634 arc_protsome_B proteasome endopeptidase complex, archaeal, beta subunit. This protein family describes the archaeal proteasome beta subunit, homologous to both the alpha subunit and to the alpha and beta subunits of eukaryotic proteasome subunits. This family is universal in the first 29 complete archaeal genomes but occasionally is duplicated.
Probab=21.41 E-value=3.8e+02 Score=22.27 Aligned_cols=44 Identities=25% Similarity=0.227 Sum_probs=29.4
Q ss_pred ceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024894 164 SAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA 214 (261)
Q Consensus 164 G~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~ 214 (261)
|.+.... +.++|.|..++...|=+ ..+..++.+||.+.+++-+.
T Consensus 119 G~~~~~~---~~a~G~g~~~~~~~Le~----~~~~~~s~~ea~~l~~~~l~ 162 (185)
T TIGR03634 119 GGIIEDD---YTATGSGSPVAYGVLED----EYREDMSVEEAKKLAVRAIK 162 (185)
T ss_pred CCeEECC---EEEEcCcHHHHHHHHHh----cCCCCCCHHHHHHHHHHHHH
Confidence 4454432 55789999988876643 23467899998887766443
No 56
>PLN02402 cytidine deaminase
Probab=20.98 E-value=5.1e+02 Score=24.36 Aligned_cols=51 Identities=6% Similarity=-0.005 Sum_probs=35.7
Q ss_pred HHHHHHh-CCCCHHHHHHHHHHHHHHh----CCCCeEEEEEEeCCCCEEEEEEcce
Q 024894 191 QTVESMR-QGMGPELAAKDAISRIARK----FPDFVGAVVAINKNGEHAGACHGWT 241 (261)
Q Consensus 191 ~i~~~~~-~g~s~~~A~~~ai~~~~~~----~~~~~gGvI~l~~~G~~~~~~~~~~ 241 (261)
++...+. .|.+..+-+...+.+..++ |..+..|-+++..+|++-..+|-..
T Consensus 12 ~~~~l~~~~g~~~~~ll~~l~~~A~~~AyaPYS~F~VGAa~l~~~G~i~~GvNVEn 67 (303)
T PLN02402 12 EAESMAKQSGLTVLQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRIFLGVNLEF 67 (303)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCCCCeeeEEEEeCCCCEEEEEeeec
Confidence 3434444 6888777666666655442 4568899999999999988888653
No 57
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=20.74 E-value=3e+02 Score=22.21 Aligned_cols=48 Identities=21% Similarity=0.249 Sum_probs=33.8
Q ss_pred HHHHHHHHhhcCCCeEEec-----------------HHHHHHHHHCCCCC---CCCCCcHHHHHHHHH
Q 024894 20 GIRAARLVMQHTEHTLLAG-----------------EKASAFAIAMGLPG---PANLSSAESMDKWTK 67 (261)
Q Consensus 20 PI~lAr~Vme~t~h~~LvG-----------------~gA~~fA~~~G~~~---~~~l~t~~a~~~~~~ 67 (261)
--.|.+.+-+..+..+++| +=++++....++|. +|.+.|-.+++++.+
T Consensus 37 ~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 37 WSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCHHHHHHHHHH
Confidence 3446666666788999999 33344444447774 889999999998765
No 58
>PTZ00488 Proteasome subunit beta type-5; Provisional
Probab=20.64 E-value=3e+02 Score=24.66 Aligned_cols=52 Identities=13% Similarity=0.039 Sum_probs=32.9
Q ss_pred ccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHH---HHhC--CCCeEEEEEEeCCC
Q 024894 176 ATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRI---ARKF--PDFVGAVVAINKNG 231 (261)
Q Consensus 176 ~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~---~~~~--~~~~gGvI~l~~~G 231 (261)
++|.|..+++..|=+. .+..++.+||.+.+++-+ .++. .+...=|.+++++|
T Consensus 166 a~G~gs~~~~~~Le~~----~k~dms~eEai~l~~kal~~~~~Rd~~sg~~~ei~iI~k~g 222 (247)
T PTZ00488 166 SCGSGSTYAYGVLDAG----FKWDLNDEEAQDLGRRAIYHATFRDAYSGGAINLYHMQKDG 222 (247)
T ss_pred EEccCHHHHHHHHHhc----CcCCCCHHHHHHHHHHHHHHHHHhccccCCCeEEEEEcCCc
Confidence 4799999988776543 456789999887776543 3322 22223344567776
No 59
>TIGR02214 spoVD_pbp stage V sporulation protein D. This model describes the spoVD subfamily of homologs of the cell division protein FtsI, a penicillin binding protein. This subfamily is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of spoVD.
Probab=20.60 E-value=1.8e+02 Score=29.80 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
++|+++++++++..+.+....+.+|++|. +|++-+..+.++|
T Consensus 220 ~lQ~~ae~~l~~~~~~~~~~~ga~Vvmd~~TG~ILAmas~p~~ 262 (636)
T TIGR02214 220 NIQYIIEREADKALRERKPKGVSIIVMNPKNGEILGMSNRPTY 262 (636)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEEECCCCeEEEEccCCCC
Confidence 57778887777655444334578889996 6998777676643
Done!