Query 024894
Match_columns 261
No_of_seqs 134 out of 972
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 16:17:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024894.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024894hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p4k_A N(4)-(beta-N-acetylgluc 100.0 6.4E-70 2.2E-74 496.4 24.4 212 1-255 70-288 (295)
2 4gdv_A L-asparaginase; NTN enz 100.0 1.3E-68 4.3E-73 491.7 20.8 209 1-251 84-294 (310)
3 3c17_A L-asparaginase precurso 100.0 3.8E-68 1.3E-72 490.7 22.8 215 1-251 86-303 (320)
4 2a8j_A Taspase 1, threonine as 100.0 1.2E-62 4.1E-67 467.3 18.7 234 1-258 120-393 (420)
5 1apy_B Aspartylglucosaminidase 100.0 3.9E-48 1.3E-52 318.5 18.8 135 126-260 1-139 (141)
6 1k2x_B Putative L-asparaginase 100.0 5.8E-45 2E-49 300.8 16.3 130 126-257 1-131 (143)
7 2gez_B L-asparaginase beta sub 100.0 8E-45 2.7E-49 296.7 13.3 126 126-256 1-127 (133)
8 1apy_A Aspartylglucosaminidase 100.0 1E-30 3.5E-35 219.6 10.6 91 1-92 69-161 (162)
9 2gez_A L-asparaginase alpha su 100.0 9.8E-31 3.4E-35 225.8 6.1 80 1-80 89-171 (195)
10 1k2x_A Putative L-asparaginase 99.9 3.3E-23 1.1E-27 176.4 6.1 71 1-71 86-158 (177)
11 2imh_A Hypothetical protein UN 89.8 1.2 4E-05 38.9 8.1 92 126-236 4-98 (231)
12 2v36_B Gamma-glutamyltranspept 88.4 2.5 8.7E-05 35.7 9.1 82 126-208 1-111 (193)
13 2e0w_A Gamma-glutamyltranspept 83.4 5.8 0.0002 38.7 10.0 84 123-207 364-486 (556)
14 3g9k_S Capsule biosynthesis pr 82.9 4.9 0.00017 33.3 8.1 79 126-207 1-105 (177)
15 2nlz_A Cephalosporin acylase; 82.9 4.6 0.00016 39.3 9.1 80 122-207 354-467 (547)
16 2i3o_A Gamma-glutamyltransfera 82.6 3.3 0.00011 40.1 7.9 85 122-207 327-440 (516)
17 2qmc_B GGT, gamma-glutamyltran 74.3 16 0.00056 30.4 8.8 19 126-144 1-19 (188)
18 4gdv_A L-asparaginase; NTN enz 71.7 2.7 9.3E-05 38.1 3.5 43 124-170 262-304 (310)
19 2dg5_B Gamma-glutamyltranspept 68.3 19 0.00066 30.0 7.9 28 179-207 93-120 (190)
20 1p4k_A N(4)-(beta-N-acetylgluc 59.1 7 0.00024 35.2 3.6 28 124-151 252-279 (295)
21 2gez_B L-asparaginase beta sub 45.4 6.6 0.00023 31.2 1.0 28 124-151 91-118 (133)
22 1k2x_B Putative L-asparaginase 43.2 7.6 0.00026 31.3 1.1 42 124-168 94-135 (143)
23 3e0y_A Conserved domain protei 37.0 1.2E+02 0.0041 22.4 7.3 45 189-233 17-61 (181)
24 3msh_A Hepatitis B virus X-int 37.0 30 0.001 26.1 3.5 15 122-136 14-28 (99)
25 3k2n_A Sigma-54-dependent tran 35.4 1.4E+02 0.0046 22.2 7.8 47 188-234 7-53 (177)
26 3equ_A PBP-2, penicillin-bindi 31.9 77 0.0026 30.3 6.4 42 201-242 203-245 (542)
27 3pbt_A Penicillin-binding prot 31.9 77 0.0026 30.4 6.4 42 201-242 185-227 (538)
28 3trc_A Phosphoenolpyruvate-pro 31.0 1.5E+02 0.0053 21.6 7.8 44 189-232 10-53 (171)
29 3ue3_A Septum formation, penic 30.7 82 0.0028 30.3 6.4 42 201-242 212-254 (554)
30 3oov_A Methyl-accepting chemot 28.7 1.6E+02 0.0056 21.4 6.7 42 191-232 6-47 (169)
31 3c17_A L-asparaginase precurso 26.7 19 0.00064 32.7 0.9 42 124-168 271-312 (320)
32 1qme_A Penicillin-binding prot 25.3 91 0.0031 30.6 5.7 42 201-242 220-262 (702)
33 3ci6_A Phosphoenolpyruvate-pro 23.5 2.1E+02 0.007 20.5 7.8 43 189-231 12-54 (171)
34 3mmh_A FRMSR, methionine-R-sul 23.2 2.2E+02 0.0075 22.5 6.8 50 182-232 13-62 (167)
35 3l7h_A RE64145P, roadblock; LC 21.9 52 0.0018 24.4 2.5 26 206-233 5-30 (97)
36 2hz5_A Dynein light chain 2A, 21.5 65 0.0022 24.3 2.9 27 205-233 13-39 (106)
37 1ryp_I 20S proteasome; multica 20.9 2.4E+02 0.0082 23.2 6.8 62 163-231 116-182 (222)
38 1ctt_A Cytidine deaminase; hyd 20.5 2.9E+02 0.01 24.4 7.5 43 198-240 45-91 (294)
39 3cf4_G Acetyl-COA decarboxylas 20.1 38 0.0013 27.0 1.5 30 22-51 26-64 (170)
40 1apy_B Aspartylglucosaminidase 20.0 83 0.0028 25.0 3.4 20 125-144 95-114 (141)
No 1
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=100.00 E-value=6.4e-70 Score=496.41 Aligned_cols=212 Identities=35% Similarity=0.637 Sum_probs=195.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|| .++++|||++|++|||||+|||+|||++||+||||+||++||+++||+ +++|+|++++++|++|++...
T Consensus 70 Md-~~~~~GAV~~v~~vknPI~~Ar~Vme~t~h~lLvG~gA~~fA~~~G~~-~~~l~T~~~~~~~~~~~~~~~------- 140 (295)
T 1p4k_A 70 MD-ENYNIGSVACMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQGFK-KENLLTAESEKEWKEWLKTSQ------- 140 (295)
T ss_dssp EC-TTSCEEEEEEECSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHHTTCC-CCCCCCHHHHHHHHHHHTTCC-------
T ss_pred Ee-cCCCeEEEEEcCCCCCHHHHHHHHhhcCCCeEEECHHHHHHHHHcCCC-cccCCCHHHHHHHHHHHhhcc-------
Confidence 89 689999999999999999999999999999999999999999999999 999999999999999987531
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
+.+ ..+...||||||||+|.+|||||||||||+++|+|||||||||
T Consensus 141 ---------~~~-------------------------~~~~~~~dTVGaValD~~G~lAaaTSTgG~~~K~~GRVGDspi 186 (295)
T 1p4k_A 141 ---------YKP-------------------------IVNIENHNTIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPI 186 (295)
T ss_dssp ---------CCC-------------------------CBSSSBBCCEEEEEECTTSCEEEEEEECCSTTCCTTBCCSTTS
T ss_pred ---------cCc-------------------------ccccCCCCCEEEEEEcCCCCEEEEEccCCccCCCCCccCCcCC
Confidence 100 0123458999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHh-------CCCCeEEEEEEeCCCCE
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARK-------FPDFVGAVVAINKNGEH 233 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~-------~~~~~gGvI~l~~~G~~ 233 (261)
||||+|||++++||||||+||+|||+++|++|+++|++|++|++|++++|+++.++ ++++.+|+|+||++|++
T Consensus 187 iGaG~yAd~~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~~A~~~ai~~~~~~~~~~~~~~~~~~gG~Iavd~~G~~ 266 (295)
T 1p4k_A 187 IGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEY 266 (295)
T ss_dssp BTTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEETTSCE
T ss_pred CCceeeecCCcEEEEeecccHHHHhhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccccCCceEEEEEEcCCCCE
Confidence 99999999999999999999999999999999999999999999999999998875 23577999999999999
Q ss_pred EEEEEcceeEEEEEcCCCCceE
Q 024894 234 AGACHGWTFKYSVRSPEMEDVK 255 (261)
Q Consensus 234 ~~~~~~~~f~~~~~~~~~~~~~ 255 (261)
+++||++.|+|+|.+++..+.+
T Consensus 267 ~~~~nt~~m~~~~~~~~~~~~~ 288 (295)
T 1p4k_A 267 GAYCIQDGFNFAVHDQKGNRLE 288 (295)
T ss_dssp EEEESSTTCCEEEEETTEEEEE
T ss_pred EEEecCCCceEEEEcCCCCcee
Confidence 9999999999999988776654
No 2
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=100.00 E-value=1.3e-68 Score=491.70 Aligned_cols=209 Identities=28% Similarity=0.450 Sum_probs=189.7
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHhCCCCCCc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRENGCQPNFW 78 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~~~~~~~~ 78 (261)
|||+++++|||++|++|||||+|||+||+++||+||||+||++||+++||+. +++|+|++++++|++|++.....
T Consensus 84 MdG~~~~~GaV~~v~~vknPI~~Ar~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~--- 160 (310)
T 4gdv_A 84 MDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQ--- 160 (310)
T ss_dssp EETTTTEEEEEEEECSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHHTTCCCCCGGGTCCHHHHHHHHHHTC--------
T ss_pred EECCCCccceEeccCCCCCHHHHHHHHHhcCCCccccCcHHHHHHHHhCCCccCCcccccHHHHHHHHHHHhhhccc---
Confidence 8999999999999999999999999999999999999999999999999983 57899999999999986432100
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCC
Q 024894 79 KNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDG 158 (261)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDs 158 (261)
.......|||||+||+|.+|||||||||||+++|+|||||||
T Consensus 161 --------------------------------------~~~~~~~~dTVG~ValD~~G~iaaaTSTgG~~~K~~GRVGDs 202 (310)
T 4gdv_A 161 --------------------------------------KTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDS 202 (310)
T ss_dssp --------------------------------------------CCCCEEEEEECTTSCEEEEEEECCSTTCCTTBCCST
T ss_pred --------------------------------------ccccccccCceeeEEEeCCCCEEEEECCCCcccCCCCCCCCc
Confidence 012345699999999999999999999999999999999999
Q ss_pred CccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEE
Q 024894 159 PIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACH 238 (261)
Q Consensus 159 pi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~ 238 (261)
||||||+|||++++||||||+||+|||+++|++|+++|++|++|++|++++|+++.+++++ .+|+|+||++|+++++||
T Consensus 203 piiGaG~yAdn~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~eA~~~~i~~~~~~~~g-~gG~Iavd~~G~~~~~~n 281 (310)
T 4gdv_A 203 PCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEAADLSLGYMKSRVKG-LGGLIVVSKTGDWVAKWT 281 (310)
T ss_dssp TSBTTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHCC-CEEEEEEETTSCEEEEES
T ss_pred CcCCceeEecCCcEEEEeecCcHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999888754 599999999999999999
Q ss_pred cceeEEEEEcCCC
Q 024894 239 GWTFKYSVRSPEM 251 (261)
Q Consensus 239 ~~~f~~~~~~~~~ 251 (261)
|+.|+|+|+..+.
T Consensus 282 t~gM~~a~~~~G~ 294 (310)
T 4gdv_A 282 STSMPWAAAKDGK 294 (310)
T ss_dssp SSBCCEEEEETTE
T ss_pred CCCceEEEEECCE
Confidence 9999999997654
No 3
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=100.00 E-value=3.8e-68 Score=490.68 Aligned_cols=215 Identities=27% Similarity=0.403 Sum_probs=186.2
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHhCCCCCCc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRENGCQPNFW 78 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~~~~~~~~ 78 (261)
|||.++++|||++|++|||||+|||+||+++||+||||+||++||+++||+. +++|+|++++++|++|+ ++.+++
T Consensus 86 MdG~t~~~GAV~~v~~vknPI~vAr~Vme~t~h~lLvG~GA~~fA~~~G~~~~~~~~~~t~~~~~~~~~~~---~~~~~~ 162 (320)
T 3c17_A 86 MDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAAR---KEGATV 162 (320)
T ss_dssp EETTTCCEEEEEEESSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHHTTCCCCCGGGGCCHHHHHHHHHHH---CCCC--
T ss_pred EECCCCcEEEEEecCCCCCHHHHHHHHHhcCCCeEEEcHHHHHHHHHcCCCccccccccCHHHHHHHHHHH---hccccc
Confidence 9999999999999999999999999999999999999999999999999983 44577776655555554 333222
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCC
Q 024894 79 KNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDG 158 (261)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDs 158 (261)
... + . ....++..||||||||+|.+|||||||||||+++|+|||||||
T Consensus 163 ~~~--~--~----------------------------~~~~~~~~~dTVGaValD~~G~lAaaTSTGG~~~K~~GRVGDs 210 (320)
T 3c17_A 163 LDH--S--G----------------------------APLDEKQKMGAVGAVALDLDGNLAAATSTGGMTNKLPGRVGDS 210 (320)
T ss_dssp --------------------------------------SEECTTTCCCEEEEEECTTSCEEEEEEECCCTTBCTTEECST
T ss_pred cCc--c--c----------------------------ccccCcCCCCCEEEEEEeCCCCEEEEEcCCCcCCCCCCcccCc
Confidence 110 0 0 0012345689999999999999999999999999999999999
Q ss_pred CccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEE
Q 024894 159 PIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGAC 237 (261)
Q Consensus 159 pi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~ 237 (261)
||||||+|||++++||||||+||+|||+++|++|+++|+ +|++|++|++++|.++.+++ ++.+|||+||++|+++++|
T Consensus 211 piiGaG~yAd~~~~avs~TG~GE~iir~~~A~~i~~~m~~~g~s~~~A~~~~i~~~~~~~-~g~gGvIavd~~G~~~~~~ 289 (320)
T 3c17_A 211 PLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPAL-GGSGGLIAIDHEGNVALPF 289 (320)
T ss_dssp TSBTTTEEECTTSEEEEEEECHHHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHHTHHHHT-TCCEEEEEEETTCCEECCB
T ss_pred CCcCceEeecCCcEEEEeecChHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhc-CCceEEEEEcCCCCEEEEe
Confidence 999999999999999999999999999999999999999 99999999999998766666 4679999999999999999
Q ss_pred EcceeEEEEEcCCC
Q 024894 238 HGWTFKYSVRSPEM 251 (261)
Q Consensus 238 ~~~~f~~~~~~~~~ 251 (261)
||..|+|+|.+.+.
T Consensus 290 nt~~m~~a~~~~~~ 303 (320)
T 3c17_A 290 NTEGMYRAWGYAGD 303 (320)
T ss_dssp SSSEEEEEEEETTS
T ss_pred cCCCceEEEEcCCC
Confidence 99999999997654
No 4
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=100.00 E-value=1.2e-62 Score=467.27 Aligned_cols=234 Identities=20% Similarity=0.283 Sum_probs=163.1
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHH----------HhhcCCCeEEecHHHHHHHHHCCCC--CCCCCCcHHHHHHHHHH
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARL----------VMQHTEHTLLAGEKASAFAIAMGLP--GPANLSSAESMDKWTKW 68 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~----------Vme~t~h~~LvG~gA~~fA~~~G~~--~~~~l~t~~a~~~~~~~ 68 (261)
|||+++++|||++|++|||||+|||+ ||+++||+||||+||++||+++||+ ++++|+|++++++|++|
T Consensus 120 MdG~tl~~GAVa~v~~VkNPI~lAR~vl~~~~~~~~vme~tpH~lLvGeGA~~FA~~~G~~~~~~~~l~T~~~~~~~~~~ 199 (420)
T 2a8j_A 120 MDGKSLNFGAVGALSGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRN 199 (420)
T ss_dssp EETTTCCEEEEEEECSBSCHHHHHHHHHHHHHTTTC--CCCCCSEEEHHHHHHHHHHTTCCBCC----------------
T ss_pred EecCCCceeeEEecCCCCCHHHHHHHHHHhcccccccccCCCCeEEecHHHHHHHHHcCCCcCChhhcCCHHHHHHHHHH
Confidence 99999999999999999999999998 7788999999999999999999997 37899999999999999
Q ss_pred HHhCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCC
Q 024894 69 RENGCQPNFWKNVVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGAT 148 (261)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~ 148 (261)
++... ++++..+++ + ++.. ... ......++..||||||||+|.+|||||||||||++
T Consensus 200 ~~~~~---~~~~~~~~~-~-~~~~------~~~------------~~~~~~~~~~~dTVGaVAlD~~G~lAAaTSTGG~~ 256 (420)
T 2a8j_A 200 KRKLE---LAERVDTDF-M-QLKK------RRQ------------SSEKENDSGTLDTVGAVVVDHEGNVAAAVSSGGLA 256 (420)
T ss_dssp ---------------------------------------------------------CEEEEEEETTCCEEEEEEECCST
T ss_pred HHhhh---hhhcccccc-c-cccc------ccc------------cccccccccCCCCEEEEEEeCCCCEEEEEcCCCCc
Confidence 98653 222221211 0 0000 000 00001234569999999999999999999999999
Q ss_pred CCcCceecCCCccCcceeeeCc------eeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHH-HHH-----h
Q 024894 149 FKIPGRVGDGPIAGSSAYADEE------VGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISR-IAR-----K 216 (261)
Q Consensus 149 ~K~~GRVGDspi~GaG~yAd~~------~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~-~~~-----~ 216 (261)
+|+|||||||||||||+|||++ ++||||||+||+|||+++|++|+++| ++.++.+|+..+|.+ +.+ .
T Consensus 257 ~K~pGRVGDSPiiGAG~yAd~~~~~~~~~~Avs~TG~GE~iiR~~~A~~~~~~~-~~~~a~~a~~~~i~~~~~~~~~~~~ 335 (420)
T 2a8j_A 257 LKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHAL-QAEDAHQALLETMQNKFISSPFLAS 335 (420)
T ss_dssp TCCTTBCCGGGSTTTSEEEECCBTTBSSEEEEEEEECHHHHHHTTHHHHHHHHT-TSSCHHHHHHHHHHHTTTTCGGGTT
T ss_pred CCCCCcccCCCcccceeeecCCCccCcceEEEEcccCchHHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHhhccccccc
Confidence 9999999999999999999998 89999999999999999999999998 677777777776643 211 0
Q ss_pred CCCCeEEEEEEeCC----------------CCEEEEEEcceeEEEEEcCCCCceEEEE
Q 024894 217 FPDFVGAVVAINKN----------------GEHAGACHGWTFKYSVRSPEMEDVKVFT 258 (261)
Q Consensus 217 ~~~~~gGvI~l~~~----------------G~~~~~~~~~~f~~~~~~~~~~~~~~~~ 258 (261)
..+..+|+|+||++ |+++++|||++|+|+|++.+...+++.+
T Consensus 336 ~~gg~gGvIavd~~~~~~~~~~~~~~~g~~G~~~~~~nT~~M~~g~~~~~~~~~~~~i 393 (420)
T 2a8j_A 336 EDGVLGGVIVLRSCRCSAEPDSSQNKQTLLVEFLWSHTTESMCVGYMSAQDGKAKTHI 393 (420)
T ss_dssp CSSCCEEEEEEEEC--------------CEEEEEEEESSSEEEEEEEETTTCSCEEEE
T ss_pred cCCCcceEEEEEccccccccccccccccceEEEEEEeCCchhceEEEecCCCCcEEEE
Confidence 01457999999993 7999999999999999987656666544
No 5
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=100.00 E-value=3.9e-48 Score=318.49 Aligned_cols=135 Identities=52% Similarity=0.852 Sum_probs=131.0
Q ss_pred ceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHH
Q 024894 126 TISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELA 205 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A 205 (261)
|||+||+|.+|||||||||||+++|+|||||||||||||+||||+++||||||+||+|||+++|++|+++|++|++|++|
T Consensus 1 TVGaValD~~G~lAaaTSTGG~~~K~~GRVGDspiiGaG~yAd~~~ga~s~TG~GE~iiR~~~A~~iv~~m~~G~~~~~A 80 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIPGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIA 80 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCSTTCCTTEECSTTSBTTTEEEETTTEEEEEEECHHHHGGGCHHHHHHHHHHTTCCHHHH
T ss_pred CEEEEEEeCCCCEEEEECCCCcCCccCceecCccccceeEEEcCCcEEEEeecChHHHHHHhHHHHHHHHHHcCCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEc----ceeEEEEEcCCCCceEEEEeC
Q 024894 206 AKDAISRIARKFPDFVGAVVAINKNGEHAGACHG----WTFKYSVRSPEMEDVKVFTVL 260 (261)
Q Consensus 206 ~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~----~~f~~~~~~~~~~~~~~~~~~ 260 (261)
++++|+++.++++++.+|+|+||++|+++++||+ +.|+|+|+++++++++++.|.
T Consensus 81 ~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~~~~~~~~~~~~v~ 139 (141)
T 1apy_B 81 CQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVD 139 (141)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEECSSCCSCEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEEcCCCCccEEEEec
Confidence 9999999999887778999999999999999998 489999999999999999885
No 6
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=100.00 E-value=5.8e-45 Score=300.76 Aligned_cols=130 Identities=27% Similarity=0.389 Sum_probs=121.4
Q ss_pred ceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHH
Q 024894 126 TISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPEL 204 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~ 204 (261)
|||+||+|.+|||||||||||+++|+|||||||||||||+|||++++||||||+||+|||+++|++|+++|+ +|++|++
T Consensus 1 TVGaValD~~G~iAaaTSTgG~~~K~~GRVGDspiiGaG~yAd~~~~a~s~TG~GE~iir~~~A~~i~~~m~~~g~s~~e 80 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAE 80 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCCTTBCTTEECSTTSBTTTEEECTTSEEEEEEECHHHHHHTTHHHHHHHHHHTTCCCHHH
T ss_pred CeEEEEEeCCCCEEEEECCCCcCCCcCCcccCCCccceEEEEcCCcEEEEeccChHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcceeEEEEEcCCCCceEEE
Q 024894 205 AAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGWTFKYSVRSPEMEDVKVF 257 (261)
Q Consensus 205 A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~ 257 (261)
|++++|+++..++ +..+|+|+||++|+++++||++.|+|+|.+.+. ++++.
T Consensus 81 A~~~~i~~~~~~~-~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~~-~~~~~ 131 (143)
T 1k2x_B 81 ACERVVMEKLPAL-GGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGD-TPTTG 131 (143)
T ss_dssp HHHHHHHTHHHHT-TCCEEEEEEETTCCEECCBSSSEEEEEEEETTS-CCEEE
T ss_pred HHHHHHHHHHHhc-CCceEEEEECCCCCEEEEEcCCCceEEEEcCCC-CEEEE
Confidence 9999998777766 456899999999999999999999999997753 44443
No 7
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=100.00 E-value=8e-45 Score=296.72 Aligned_cols=126 Identities=26% Similarity=0.350 Sum_probs=117.9
Q ss_pred ceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHH
Q 024894 126 TISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPEL 204 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~ 204 (261)
|||+||+|.+|||||+|||||+++|+|||||||||||||+|||++ +||||||+||+|||+++|++|+++|+ +|++|++
T Consensus 1 TVGaValD~~G~iAaatSTgG~~~K~~GRVGDspiiGaG~yAd~~-~a~s~TG~GE~iir~~~a~~i~~~m~~~g~~~~~ 79 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANEL-CAVSATGKGEEIIRATVARDVAALMEFKGLSLKE 79 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCSTTBCTTEECSTTSBTTTEEECSS-EEEEEEECHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred CEEEEEEeCCCCEEEEECCCCcCCCcCCEecCCCcccceeEEcCC-ceEEeecChHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 899999999999999999999999999999999999999999998 99999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcceeEEEEEcCCCCceEE
Q 024894 205 AAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGWTFKYSVRSPEMEDVKV 256 (261)
Q Consensus 205 A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~~f~~~~~~~~~~~~~~ 256 (261)
|++++|+++.+ ++.+|+|+||++|+++++||++.|+|+|.+.+. ++++
T Consensus 80 A~~~~i~~~~~---~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~~-~~~~ 127 (133)
T 2gez_B 80 AADFVIHERTP---KGTVGLIAVSAAGEIAMPFNTTGMFRACATEDG-YSEI 127 (133)
T ss_dssp HHHHHHHTSSC---TTSEEEEEEETTSCEECCBSSSEEEEEEEETTS-CEEE
T ss_pred HHHHHHHHHhc---CCcEEEEEEeCCCcEEEEeCCCCceEEEEcCCC-CEEE
Confidence 99999986543 577999999999999999999999999998763 4444
No 8
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=99.97 E-value=1e-30 Score=219.62 Aligned_cols=91 Identities=48% Similarity=0.917 Sum_probs=88.6
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||.++++|||++|++|||||+|||+||++|+|+||||+||++||+++||+ .++|+|++++++|++|++.++|++||++
T Consensus 69 MdG~t~~~GAVa~v~~vknPI~vAr~Vme~t~HvlLvG~GA~~fA~~~G~~-~~~l~t~~~~~~~~~~~~~~~qpn~~~n 147 (162)
T 1apy_A 69 MDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFI-NEDLSTSASQALHSDWLARNCQPNYWRN 147 (162)
T ss_dssp EETTTCCEEEEEEECSCSCHHHHHHHHHHHBSCSEEEHHHHHHHHHHTTCC-CCCCCCHHHHHHHHHHHHTTSCSCCBCS
T ss_pred EEcCCCCeEEEEecCCCCCHHHHHHHHHhcCCCeEEEcHHHHHHHHHcCCC-ccccCCHHHHHHHHHHHHhccCCCcccc
Confidence 999999999999999999999999999999999999999999999999999 7999999999999999999999999999
Q ss_pred cCCCC--CCCCCCC
Q 024894 81 VVPVD--GCGPYQP 92 (261)
Q Consensus 81 ~~~~~--~~~~~~~ 92 (261)
..||| +|+||.|
T Consensus 148 v~p~~~~~cgpy~~ 161 (162)
T 1apy_A 148 VIPDPSKYCGPYKP 161 (162)
T ss_dssp CBSCTTTCCSCCBC
T ss_pred CCCCCCCCCCCCCC
Confidence 99998 6999975
No 9
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=99.96 E-value=9.8e-31 Score=225.77 Aligned_cols=80 Identities=34% Similarity=0.437 Sum_probs=69.0
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHhC-CCCCC
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWRENG-CQPNF 77 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~~-~~~~~ 77 (261)
|||.++++|||++|++|||||+|||+||++|||+||||+||++||+++||+. +++|+|++++++|++|++.. ++++|
T Consensus 89 MdG~t~~~GAVa~v~~vknPI~vAr~Vme~t~hvlLvG~GA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~~ 168 (195)
T 2gez_A 89 MDGNTMKCGAVSGLSTVLNPISLARLVMDKTPHIYLAFQGAQDFAKQQGVETVDSSHLITAENVERLKLAIEANRVQVDY 168 (195)
T ss_dssp EETTTTEEEEEEEESSBSCHHHHHHHHHHHSSCSEEEHHHHHHHHHHHTCCBCCGGGGCCHHHHHHHHHHHHHC------
T ss_pred EEcCCCceEEEEecCCCCCHHHHHHHHHccCCCeEEEcHHHHHHHHHcCCCccChhhcCCHHHHHHHHHHHHhccCCccc
Confidence 9999999999999999999999999999999999999999999999999984 57899999999999999874 66666
Q ss_pred ccc
Q 024894 78 WKN 80 (261)
Q Consensus 78 ~~~ 80 (261)
|++
T Consensus 169 ~~~ 171 (195)
T 2gez_A 169 SQY 171 (195)
T ss_dssp ---
T ss_pred ccc
Confidence 643
No 10
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=99.87 E-value=3.3e-23 Score=176.42 Aligned_cols=71 Identities=34% Similarity=0.572 Sum_probs=64.9
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCC--CCCCCcHHHHHHHHHHHHh
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPG--PANLSSAESMDKWTKWREN 71 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~--~~~l~t~~a~~~~~~~~~~ 71 (261)
|||.++++|||++|++|||||+|||+||++|||+||||+||++||+++||+. +++++|++++++|++|++.
T Consensus 86 MdG~t~~~GAVa~v~~vknPI~vAr~Vme~t~hvlLvG~GA~~fA~~~G~~~~~~~~~~T~~~~~~~~~~~~~ 158 (177)
T 1k2x_A 86 MDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKE 158 (177)
T ss_dssp EETTTCCEEEEEEESSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHTTTCCCCCGGGGCCHHHHHHHHHHC--
T ss_pred EecCCCceEEEEecCCCCCHHHHHHHHHccCCCeEEEcHHHHHHHHHcCCCccCcccccCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999983 5578899888888888654
No 11
>2imh_A Hypothetical protein UNP Q5LQD5_silpo; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.57A {Silicibacter pomeroyi} SCOP: d.153.1.7
Probab=89.83 E-value=1.2 Score=38.94 Aligned_cols=92 Identities=20% Similarity=0.197 Sum_probs=61.1
Q ss_pred ceEEEEEcCC-CCEEEEecCCCCCCCcCceecCCCccCcc-eeeeCceeEEeccCchHHHHhhhh-HHHHHHHHhCCCCH
Q 024894 126 TISMAVIDKM-GHVAVGTSTNGATFKIPGRVGDGPIAGSS-AYADEEVGACGATGDGDIMMRFLP-CYQTVESMRQGMGP 202 (261)
Q Consensus 126 TVGaVa~D~~-G~iAaatSTGG~~~K~~GRVGDspi~GaG-~yAd~~~~A~s~TG~GE~iir~~l-A~~i~~~~~~g~s~ 202 (261)
|--.|++|.. |.+.+|++|+.+ -+|+= -|+...+|||++=. +..-.+ .....++|++|.++
T Consensus 4 TFSIvardp~tG~~GvAvaS~~~------------aVGa~vp~~~agvGAVATQ~----~tnp~l~G~~gL~lL~~G~~a 67 (231)
T 2imh_A 4 TFSILAHDPETGAIGGAAATGSL------------CVGGWVLRGDLNAGMSASQG----AAPSTFWGEEVLQHLRDGSHP 67 (231)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS------------CHHHHHEEEETTTEEEEEES----SSCCHHHHHHHHHHHHTTCCH
T ss_pred EEEEEEEcCCCCcEEEEEEecCc------------ccccccccccCCcceEEecc----cCCccccCHHHHHHHHcCCCH
Confidence 5567888864 788888888654 24332 25666678776654 334555 67888999999999
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEE
Q 024894 203 ELAAKDAISRIARKFPDFVGAVVAINKNGEHAGA 236 (261)
Q Consensus 203 ~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~ 236 (261)
++|++..++.=.. ...--+.+||.+|+.+..
T Consensus 68 ~~al~~l~~~D~~---~~~RQ~~vvD~~G~~A~~ 98 (231)
T 2imh_A 68 EDAVNHVTSQDSG---RAYRQLAAMDLLGNAAAF 98 (231)
T ss_dssp HHHHHHHHHTCTT---GGGCEEEEEETTSCEEEE
T ss_pred HHHHHHHHhcCCC---cccceEEEECCCCCeEEE
Confidence 9988877753111 112245578999987554
No 12
>2v36_B Gamma-glutamyltranspeptidase small chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_B*
Probab=88.40 E-value=2.5 Score=35.66 Aligned_cols=82 Identities=20% Similarity=0.210 Sum_probs=45.6
Q ss_pred ceEEEEEcCCCCEEEEecCCCCCC-----------CcCceecCC-CccCccee-----------------eeCceeEEec
Q 024894 126 TISMAVIDKMGHVAVGTSTNGATF-----------KIPGRVGDG-PIAGSSAY-----------------ADEEVGACGA 176 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatSTGG~~~-----------K~~GRVGDs-pi~GaG~y-----------------Ad~~~~A~s~ 176 (261)
|+-..++|.+||..+.|+|=...| -+--|..|- ..+|.=.+ .+.+...+-.
T Consensus 1 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tG~~LNN~m~dFs~~pg~~N~i~PGKRP~ssm~Ptiv~~~g~~~l~~G 80 (193)
T 2v36_B 1 TTHFTVADRWGNVVSYTTTIEQLFGTGIMVPDYGVILNNELTDFDAIPGGANEVQPNKRPLSSMTPTILFKDDKPVLTVG 80 (193)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSSSSSTTBCCTTCCCCBCCCCEEEEETTEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCCceeECCCCCCccCCCCCCCccCCCCcccccCCCEEEEeCCCEEEEEE
Confidence 677889999999999999833222 111122221 12221000 1111122222
Q ss_pred cCchHHHHhhhhHHHHHHHHhCCCCHHHHHHH
Q 024894 177 TGDGDIMMRFLPCYQTVESMRQGMGPELAAKD 208 (261)
Q Consensus 177 TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ 208 (261)
+-=|..|+ ...++.++..+..|++|++|++.
T Consensus 81 s~GG~~i~-~~~~q~l~n~ld~gm~~q~Ai~a 111 (193)
T 2v36_B 81 SPGGATII-SSVLQTILYHIEYGMELKAAVEE 111 (193)
T ss_dssp CCCGGGHH-HHHHHHHHHHHTSCCCHHHHHHS
T ss_pred CCCcchhH-HHHHHHHHHHHccCCCHHHHhhC
Confidence 33355555 44566778888899999998864
No 13
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=83.38 E-value=5.8 Score=38.71 Aligned_cols=84 Identities=19% Similarity=0.218 Sum_probs=47.6
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCC-----------CCcCceecC-CCccCcc----------e---------------
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGAT-----------FKIPGRVGD-GPIAGSS----------A--------------- 165 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~-----------~K~~GRVGD-spi~GaG----------~--------------- 165 (261)
.+||+-..++|.+||..+.|+|=... +-+--|..| +..+|.= .
T Consensus 364 ~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lNN~~~dFs~~pg~~n~~gl~~~~~N~i~PgKRP~ssm~Pt 443 (556)
T 2e0w_A 364 SNQATHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPT 443 (556)
T ss_dssp CSCCEEEEEECTTCCEEEEEEECSSTTTTSCBCGGGCCBCCCCC---------------------------CCCBCCCCE
T ss_pred CCCCEEEEEEcCCCCEEEEeccCCCCcCCeEEcCCCceEecCCCCCcCCCCCCCccccCCCCcccccCCCCCccccCCCe
Confidence 48999999999999999999983221 112223333 1223310 0
Q ss_pred --eeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 166 --YADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 166 --yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
..+.+...+-.|-=|..|+. ..++.++..+..|++|++|+.
T Consensus 444 iv~~~g~~~l~~Gs~GG~~i~~-~~~q~l~n~ld~gm~~q~Ai~ 486 (556)
T 2e0w_A 444 IVVKDGKTWLVTGSPGGSRIIT-TVLQMVVNSIDYGLNVAEATN 486 (556)
T ss_dssp EEEETTEEEEEECCCSTTHHHH-HHHHHHHHHHTSCCCHHHHHH
T ss_pred EEEeCCcEEEEEECCChHHHHH-HHHHHHHHHHhcCCCHHHHHh
Confidence 01112222223333566654 556678888889999999885
No 14
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=82.91 E-value=4.9 Score=33.34 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=46.2
Q ss_pred ceEEEEEcCCCCEEEEecCCCCCCC---------c----------------CceecCC-CccCcceeeeCceeEEeccCc
Q 024894 126 TISMAVIDKMGHVAVGTSTNGATFK---------I----------------PGRVGDG-PIAGSSAYADEEVGACGATGD 179 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatSTGG~~~K---------~----------------~GRVGDs-pi~GaG~yAd~~~~A~s~TG~ 179 (261)
|+-..++|.+||..+.|+|-...|- + ||+-=-+ -+|.- ..-+++..+. .+-=
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~tGi~LNN~m~dFsp~~~N~i~PgKRP~ssm~Pti-v~~~g~~l~~-Gs~G 78 (177)
T 3g9k_S 1 TTHFVIIDRDGTVVSSTNTLSNFFGTGKYTAGFFLNNQLQNFGSEGFNSYEPGKRSRTFMAPTV-LKKDGETIGI-GSPG 78 (177)
T ss_dssp CEEEEEECTTCCEEEEEEECSSTTTTSCEETTEECCCCCCC----------CCCCCCCCCCCEE-EEETTEEEEE-ECCC
T ss_pred CeEEEEECCCCCEEEEEccCCCCCCcceEecceEEcCcccccCCCCCcccCCCCccccCCCCEE-EEcCCcEEEE-ECCC
Confidence 6778899999999999998654431 1 1111111 01100 1112222223 2333
Q ss_pred hHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 180 GDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 180 GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
|..|+. ..++.++..+..|++|++|++
T Consensus 79 G~~i~~-~~~q~l~n~ld~gm~~q~Ai~ 105 (177)
T 3g9k_S 79 GNRIPQ-ILTPILDKYTHGKGSLQDIIN 105 (177)
T ss_dssp GGGHHH-HHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHhCCCCHHHHHh
Confidence 555554 556788888889999999985
No 15
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=82.88 E-value=4.6 Score=39.30 Aligned_cols=80 Identities=16% Similarity=0.131 Sum_probs=47.7
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeC--------------------------------
Q 024894 122 HSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADE-------------------------------- 169 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~-------------------------------- 169 (261)
..+||+-..++|.+||..+.|+|-...|-- |.+ ++|.|+.-+|
T Consensus 354 ~~~~Tth~svvD~~GnaVS~t~Si~~~FGS-gv~----~pgtGi~LNN~~~~Fs~~p~~~N~i~PgKRP~ssm~Ptiv~~ 428 (547)
T 2nlz_A 354 PRGGTVYLATADGDGNMVSFIQSNYMGFGS-GVV----VPGTGIAMQNRGHNFSLDPNHDNALKPGKRTYHTIIPGFLTK 428 (547)
T ss_dssp ----CEEEEEEETTSCEEEEEEECSSTTCS-SCE----ETTTTEEBCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEccCCCccCC-eee----cCCceEEeeCCCCCCCCCCCCCCcCCCCCccccCCCCeEEEe
Confidence 348999999999999999999995544311 111 1223333322
Q ss_pred --ceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 170 --EVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 170 --~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
+...+-.|-=|..|+. ..++.++..+..|++|++|+.
T Consensus 429 ~g~~~l~~Gs~GG~~i~~-~~~qvl~n~ld~gm~~q~Ai~ 467 (547)
T 2nlz_A 429 NDQPIGPFGVMGGFMQPQ-GHMQVMMNTIDFGLNPQAALD 467 (547)
T ss_dssp SSCEEEEEEECSGGGHHH-HHHHHHHHHHTTCCCHHHHHH
T ss_pred CCceEEEEECCchHHHHH-HHHHHHHHHHhcCCCHHHHHh
Confidence 1112222333555554 456677888889999999985
No 16
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=82.59 E-value=3.3 Score=40.06 Aligned_cols=85 Identities=15% Similarity=0.129 Sum_probs=48.2
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCCCC-----------CcCceecC-CCccCcc----------------e-eeeCcee
Q 024894 122 HSHDTISMAVIDKMGHVAVGTSTNGATF-----------KIPGRVGD-GPIAGSS----------------A-YADEEVG 172 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G~iAaatSTGG~~~-----------K~~GRVGD-spi~GaG----------------~-yAd~~~~ 172 (261)
..+||+-..++|.+||..+.|+|-...| -+--|..| +..+|.= + ..+.+..
T Consensus 327 ~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lnN~~~~Fs~~p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~ 406 (516)
T 2i3o_A 327 DIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTLQRDHPNALMPGKRTFHTLAACMVEKEHDLY 406 (516)
T ss_dssp CCCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEEEEETTEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEeccCCCCcCCeeeeCCCceEEeCCCCccCCCCCCCCcCCCCCCcccCCCCeEEEeCCceE
Confidence 3489999999999999999999833222 11112222 0111110 0 0111122
Q ss_pred EEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 173 ACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 173 A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
.+-.|-=|..|+. ..++.++..+..|++|++|++
T Consensus 407 l~~Gs~GG~~i~~-~~~q~l~n~ld~gm~~q~Ai~ 440 (516)
T 2i3o_A 407 ASLGSMGGDIQPQ-VQMQILMEILKDNTDPQAILD 440 (516)
T ss_dssp EEEEECCSTTHHH-HHHHHHHHHTTCCSCHHHHHH
T ss_pred EEEECCCcHHHHH-HHHHHHHHHHhcCCCHHHHHh
Confidence 2222333555554 455677788889999999886
No 17
>2qmc_B GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_B* 2nqo_B* 3fnm_B*
Probab=74.26 E-value=16 Score=30.36 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=17.4
Q ss_pred ceEEEEEcCCCCEEEEecC
Q 024894 126 TISMAVIDKMGHVAVGTST 144 (261)
Q Consensus 126 TVGaVa~D~~G~iAaatST 144 (261)
|+-..++|.+||..+.|+|
T Consensus 1 Tth~svvD~~GnaVS~T~S 19 (188)
T 2qmc_B 1 ATHYSVADRWGNAVSVTYT 19 (188)
T ss_dssp CEEEEEEETTSCEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEec
Confidence 6778899999999999998
No 18
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=71.72 E-value=2.7 Score=38.12 Aligned_cols=43 Identities=12% Similarity=0.133 Sum_probs=32.4
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeeeCc
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYADEE 170 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd~~ 170 (261)
.++.|.|++|.+|+++++.+|.|+.+-+. +-|. .. .|.|.|+.
T Consensus 262 ~g~gG~Iavd~~G~~~~~~nt~gM~~a~~-~~G~-~~--~~i~~~~~ 304 (310)
T 4gdv_A 262 KGLGGLIVVSKTGDWVAKWTSTSMPWAAA-KDGK-LH--FGIDPDDT 304 (310)
T ss_dssp CCCEEEEEEETTSCEEEEESSSBCCEEEE-ETTE-EE--EESSTTCC
T ss_pred CCcEEEEEEeCCCCEEEEECCCCceEEEE-ECCE-EE--EeECCCcc
Confidence 57899999999999999999999976553 2222 22 46777764
No 19
>2dg5_B Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_B 2dbw_B* 2dbx_B* 2e0x_B 2e0y_B 2z8i_B* 2z8j_B* 2z8k_B*
Probab=68.29 E-value=19 Score=29.96 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=21.1
Q ss_pred chHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 179 DGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 179 ~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
=|..|+. ..++.++..+..|+++++|++
T Consensus 93 GG~~i~~-~~~q~l~n~ld~gm~~q~Ai~ 120 (190)
T 2dg5_B 93 GGSRIIT-TVLQMVVNSIDYGLNVAEATN 120 (190)
T ss_dssp CGGGHHH-HHHHHHHHHHTSCCCHHHHHH
T ss_pred CcchHHH-HHHHHHHHHHccCCCHHHHhh
Confidence 3566654 456678888889999999885
No 20
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=59.10 E-value=7 Score=35.16 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=24.7
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCc
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKI 151 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~ 151 (261)
.+++|.|++|.+|+++++.+|.|+.+-.
T Consensus 252 ~~~gG~Iavd~~G~~~~~~nt~~m~~~~ 279 (295)
T 1p4k_A 252 DIQVGFIALNKKGEYGAYCIQDGFNFAV 279 (295)
T ss_dssp GCCEEEEEEETTSCEEEEESSTTCCEEE
T ss_pred CceEEEEEEcCCCCEEEEecCCCceEEE
Confidence 4789999999999999999998887644
No 21
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=45.38 E-value=6.6 Score=31.22 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=24.8
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCc
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKI 151 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~ 151 (261)
....|.|++|.+|+++.+.+|.|+.+-.
T Consensus 91 ~g~~GvIavd~~G~~~~~~nt~~m~~a~ 118 (133)
T 2gez_B 91 KGTVGLIAVSAAGEIAMPFNTTGMFRAC 118 (133)
T ss_dssp TTSEEEEEEETTSCEECCBSSSEEEEEE
T ss_pred CCcEEEEEEeCCCcEEEEeCCCCceEEE
Confidence 5889999999999999999999987544
No 22
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=43.19 E-value=7.6 Score=31.25 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=30.6
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeee
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYAD 168 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd 168 (261)
.+..|.|++|.+|+++.+.+|.|+.+-...+ .+.|.+ +.|.+
T Consensus 94 ~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~-~~~~~~--~i~~~ 135 (143)
T 1k2x_B 94 GGSGGLIAIDHEGNVALPFNTEGMYRAWGYA-GDTPTT--GIYRE 135 (143)
T ss_dssp TCCEEEEEEETTCCEECCBSSSEEEEEEEET-TSCCEE--EEECC
T ss_pred CCceEEEEECCCCCEEEEEcCCCceEEEEcC-CCCEEE--EEEcC
Confidence 4788999999999999999999998554332 223443 45654
No 23
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=37.03 E-value=1.2e+02 Score=22.38 Aligned_cols=45 Identities=4% Similarity=-0.049 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCE
Q 024894 189 CYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEH 233 (261)
Q Consensus 189 A~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~ 233 (261)
=+++...+....++++.++.+++.+.+.++-..+.|..+|.++..
T Consensus 17 l~~i~~~l~~~~~~~~~l~~i~~~~~~~~~~~~~~i~l~d~~~~~ 61 (181)
T 3e0y_A 17 LEEISMLVSSDFDLPEVLQHVTAKVATQLKVSVCNIYLREGDEVV 61 (181)
T ss_dssp HHHHHHHHSTTSCHHHHHHHHHHHHHHHTTCSCEEEEEEETTEEE
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCCeEEEEEEcCCCce
Confidence 356778888888999999999999998886556677777877653
No 24
>3msh_A Hepatitis B virus X-interacting protein; alpha-beta proteins, profilin-like fold, roadblock/LC7 domai superfamily, protein binding; HET: PG4; 1.51A {Homo sapiens} PDB: 3ms6_A*
Probab=37.00 E-value=30 Score=26.09 Aligned_cols=15 Identities=13% Similarity=0.313 Sum_probs=13.6
Q ss_pred CCCCceEEEEEcCCC
Q 024894 122 HSHDTISMAVIDKMG 136 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G 136 (261)
...++||++|.|++|
T Consensus 14 ~~pgvvGvlc~D~qG 28 (99)
T 3msh_A 14 KNPSIVGVLCTDSQG 28 (99)
T ss_dssp TSTTEEEEEEECTTC
T ss_pred ccCCcEEEEEECCCC
Confidence 457999999999998
No 25
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls}
Probab=35.35 E-value=1.4e+02 Score=22.23 Aligned_cols=47 Identities=9% Similarity=0.085 Sum_probs=37.4
Q ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEE
Q 024894 188 PCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHA 234 (261)
Q Consensus 188 lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~ 234 (261)
+-+++...|....++++.++.+++.+.+.++-..+.|..+|.++..-
T Consensus 7 ll~~i~~~l~~~~d~~~~l~~i~~~~~~~~~~~~~~i~l~d~~~~~l 53 (177)
T 3k2n_A 7 LMQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREA 53 (177)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHTTTCCCSEEEEEEEETTTTEE
T ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCeE
Confidence 44678888888899999999999998887765666777788887654
No 26
>3equ_A PBP-2, penicillin-binding protein 2; class B transpeptidase, cell DIV cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A*
Probab=31.94 E-value=77 Score=30.34 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
.+|++++++|++..+.+....+++|++|. +|++-+..+.++|
T Consensus 203 ~lQ~~ae~~l~~~~~~~~~~~ga~Vv~d~~TGeIlAm~s~p~y 245 (542)
T 3equ_A 203 RIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEILALANTPAY 245 (542)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEETTTCBEEEEEEESCC
T ss_pred HHHHHHHHHHHhhHhhcCCceEEEEEEECCCCeEEEEEeCCCC
Confidence 36778888887766666666788999996 6998777676644
No 27
>3pbt_A Penicillin-binding protein 3; PBP3, hydrolase-antibiotic complex; HET: UE1; 1.64A {Pseudomonas aeruginosa} PDB: 3pbn_A* 3pbo_A* 3pbr_A* 3pbs_A* 3pbq_A* 4fsf_A* 3oc2_A 3ocl_A* 3ocn_A*
Probab=31.91 E-value=77 Score=30.38 Aligned_cols=42 Identities=14% Similarity=0.130 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
.+|++++++|++..+.+....+++|++|. +|++-+..+.++|
T Consensus 185 ~lQ~~ae~~l~~~~~~~~~~~ga~Vvmdp~TGeILAm~s~p~y 227 (538)
T 3pbt_A 185 RLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTY 227 (538)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEETTTCBEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEEEECCCCcEEEEEeCCCC
Confidence 36778888887765666666789999996 6998777676644
No 28
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=31.02 E-value=1.5e+02 Score=21.55 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCC
Q 024894 189 CYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGE 232 (261)
Q Consensus 189 A~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~ 232 (261)
=+++...+....++++.++.+++.+.+.++-..+.|..+|.++.
T Consensus 10 L~~i~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~i~l~d~~~~ 53 (171)
T 3trc_A 10 LRQITQEVNAAPNLEQALKLVVVRLCEALPADACSLFICDDVHG 53 (171)
T ss_dssp HHHHHHHHHHCSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTTT
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHhCCcEEEEEEEECCCC
Confidence 34667777777899999999999999888766667777888774
No 29
>3ue3_A Septum formation, penicillin binding protein 3, peptidoglycan synthetase; transpeptidase, transferase; 2.30A {Acinetobacter}
Probab=30.68 E-value=82 Score=30.29 Aligned_cols=42 Identities=7% Similarity=0.013 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
.+|++++++|++..+.+....+++|++|. +|++-+..+.++|
T Consensus 212 ~lQ~~ae~~l~~~~~~~~~~~ga~Vvmdp~TGeILAm~s~p~y 254 (554)
T 3ue3_A 212 RLQYIMYRELTAAGVANNARSATAIAVDVKTGEILAMTSWPSY 254 (554)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEETTTCBEEEEEEESCC
T ss_pred HHHHHHHHHHHhhhhhcCCceEEEEEEECCCCeEEEEEeCCCC
Confidence 46788888887766666666789999996 6998777777654
No 30
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=28.73 E-value=1.6e+02 Score=21.36 Aligned_cols=42 Identities=2% Similarity=-0.024 Sum_probs=31.4
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCC
Q 024894 191 QTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGE 232 (261)
Q Consensus 191 ~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~ 232 (261)
++...+....++++.++.+++.+.+.++-..+.|..+|.++.
T Consensus 6 ~i~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~i~l~d~~~~ 47 (169)
T 3oov_A 6 QISSRIQKSIDVDEVLRLCAEGLHDVLGYERVNILMADTART 47 (169)
T ss_dssp CHHHHHHHCCCHHHHHHHHHHHHHHTTCCSEEEEEEECTTSS
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHhhCCceEEEEEEeCCCC
Confidence 455666667899999999999998877655566666776654
No 31
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=26.67 E-value=19 Score=32.66 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=30.8
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeee
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYAD 168 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd 168 (261)
.++.|.|++|.+|+++.+.+|.|+.+-+... ++.|.+ +.|.+
T Consensus 271 ~g~gGvIavd~~G~~~~~~nt~~m~~a~~~~-~~~~~~--~i~~~ 312 (320)
T 3c17_A 271 GGSGGLIAIDHEGNVALPFNTEGMYRAWGYA-GDTPTT--GIYRE 312 (320)
T ss_dssp TCCEEEEEEETTCCEECCBSSSEEEEEEEET-TSCCEE--ESSCC
T ss_pred CCceEEEEEcCCCCEEEEecCCCceEEEEcC-CCCEEE--EEECC
Confidence 5789999999999999999999997544322 224444 45654
No 32
>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*
Probab=25.26 E-value=91 Score=30.64 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
.+|++++++|++..+.+....+++|++|. +|++-+..+.++|
T Consensus 220 ~lQ~~ae~~l~~~~~~~~~~~ga~Vv~dp~TGeIlAm~~~p~y 262 (702)
T 1qme_A 220 PLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTF 262 (702)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEETTTCBEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEecCCCC
Confidence 47788888888766655556789999997 6998766666644
No 33
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=23.50 E-value=2.1e+02 Score=20.49 Aligned_cols=43 Identities=7% Similarity=0.098 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCC
Q 024894 189 CYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNG 231 (261)
Q Consensus 189 A~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G 231 (261)
=.++...+....++++.++.+++.+.+.++-..+.|..+|.++
T Consensus 12 l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~i~l~~~~~ 54 (171)
T 3ci6_A 12 LRRIVQEINSSVSLHDSLDIMVNQVADAMKVDVCSIYLLDERN 54 (171)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHTCSEEEEEEEETTT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 3467777888889999999999998887765566776777763
No 34
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=23.16 E-value=2.2e+02 Score=22.49 Aligned_cols=50 Identities=8% Similarity=0.009 Sum_probs=37.4
Q ss_pred HHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCC
Q 024894 182 IMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGE 232 (261)
Q Consensus 182 ~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~ 232 (261)
...+.++ .++...+....++.+.+..+++.+.+.++-..+++..+|.+++
T Consensus 13 ~~~~~ll-~~i~~ll~~~~dl~~~L~~v~~~l~~~l~~~~~~iyL~d~~~~ 62 (167)
T 3mmh_A 13 ALYREVL-PQIESVVADETDWVANLANTAAVLKEAFGWFWVGFYLVDTRSD 62 (167)
T ss_dssp HHHHHHH-HHHHHHHHTCCCHHHHHHHHHHHHHHHHCCSEEEEEEEETTTT
T ss_pred HHHHHHH-HHHHHHHccCCCHHHHHHHHHHHHHHHcCCcEEEEEEEECCCC
Confidence 3334333 5677777777899999999998888877766688888987764
No 35
>3l7h_A RE64145P, roadblock; LC7, KM23, dynein, light chain, hydrolase, protei transport; 1.95A {Drosophila melanogaster} SCOP: d.110.7.1 PDB: 3l9k_A 1z09_A 2e8j_A 1y4o_A
Probab=21.94 E-value=52 Score=24.45 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEEEeCCCCE
Q 024894 206 AKDAISRIARKFPDFVGAVVAINKNGEH 233 (261)
Q Consensus 206 ~~~ai~~~~~~~~~~~gGvI~l~~~G~~ 233 (261)
++++|++|..+ .+.-|+|+++++|..
T Consensus 5 veetl~ri~~~--kgV~G~iI~n~~G~p 30 (97)
T 3l7h_A 5 VEETLKRIQSH--KGVVGTIVVNNEGIP 30 (97)
T ss_dssp ----CHHHHTS--TTEEEEEEEETTSCE
T ss_pred HHHHHHHHhcC--CCceEEEEECCCCCE
Confidence 56788888654 356899999999976
No 36
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=21.51 E-value=65 Score=24.34 Aligned_cols=27 Identities=15% Similarity=0.374 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEEeCCCCE
Q 024894 205 AAKDAISRIARKFPDFVGAVVAINKNGEH 233 (261)
Q Consensus 205 A~~~ai~~~~~~~~~~~gGvI~l~~~G~~ 233 (261)
.++++|++|..+ + +.-|+|++|.+|..
T Consensus 13 evEe~l~RI~~~-k-gV~G~iIln~~G~p 39 (106)
T 2hz5_A 13 EVEETLKRLQSQ-K-GVQGIIVVNTEGIP 39 (106)
T ss_dssp --CHHHHHHHTS-T-TEEEEEEECTTCCE
T ss_pred HHHHHHHHHhcC-C-CceEEEEEcCCCCe
Confidence 467888888764 3 46899999999965
No 37
>1ryp_I 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1g0u_H* 1jd2_H* 1g65_H 1vsy_I 1z7q_I 2f16_H* 2fak_H* 2fny_H* 2gpl_H* 3d29_H* 3dy3_H* 3dy4_H* 3e47_H* 3gpj_H* 3gpt_H* 3gpw_H* 3hye_H* 3l5q_M 3mg0_H* 3mg4_H* ...
Probab=20.87 E-value=2.4e+02 Score=23.18 Aligned_cols=62 Identities=15% Similarity=-0.007 Sum_probs=36.9
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH---hC--CCCeEEEEEEeCCC
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR---KF--PDFVGAVVAINKNG 231 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~---~~--~~~~gGvI~l~~~G 231 (261)
.|.|-... ..++|.|...++..|=+. .+..++.+||.+-+++-|.. +. .+...=|.+++++|
T Consensus 116 ~G~~~~~~---~~aiGsgs~~a~~~Le~~----~~~~ms~eeA~~la~~al~~~~~~d~~sg~~i~v~vi~~~g 182 (222)
T 1ryp_I 116 HGSTDVGY---YLSLGSGSLAAMAVLESH----WKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGK 182 (222)
T ss_dssp TSCEEECS---EEEESTTHHHHHHHHHHH----CCSSCCHHHHHHHHHHHHHHHHHHCTTCCSCEEEEEEETTS
T ss_pred CCCEEecC---EEEECCCHHHHHHHHHhh----CCCCcCHHHHHHHHHHHHHHHHhccccCCCcEEEEEEECCC
Confidence 45554443 335688877665544322 34688999998877665543 21 23335566788888
No 38
>1ctt_A Cytidine deaminase; hydrolase; HET: DHZ; 2.20A {Escherichia coli} SCOP: c.97.1.1 c.97.1.1 PDB: 1aln_A* 1af2_A* 1ctu_A*
Probab=20.53 E-value=2.9e+02 Score=24.38 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=32.4
Q ss_pred CCCCHHHHHHHHHHHHHHh----CCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 198 QGMGPELAAKDAISRIARK----FPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 198 ~g~s~~~A~~~ai~~~~~~----~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
.|++.++-..++..+..++ |+.+.+|-++++.+|++-..||-.
T Consensus 45 ~~~~~~~ll~~~a~~a~~~AyaPyS~f~VGAall~~dG~i~~G~NvE 91 (294)
T 1ctt_A 45 TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANME 91 (294)
T ss_dssp SCCCHHHHHHHHHHHHHHTCBCTTTCCCCEEEEEETTSCEEEEECBC
T ss_pred cCCCHHHHHHHHHHHHHHhccCccCCCcEEEEEEeCCCCEEEEEcCC
Confidence 6888877766666555442 446778888999999998888866
No 39
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=20.06 E-value=38 Score=27.04 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=21.6
Q ss_pred HHHHHHhhcCCCeEEecHHH---------HHHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKA---------SAFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA---------~~fA~~~G~~ 51 (261)
.+|+.+.+-.+|++|+|.|+ .+||+..|+|
T Consensus 26 ~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iP 64 (170)
T 3cf4_G 26 MAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIP 64 (170)
T ss_dssp HHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCC
Confidence 44555555568999999754 3778888887
No 40
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=20.01 E-value=83 Score=25.04 Aligned_cols=20 Identities=5% Similarity=-0.052 Sum_probs=18.0
Q ss_pred CceEEEEEcCCCCEEEEecC
Q 024894 125 DTISMAVIDKMGHVAVGTST 144 (261)
Q Consensus 125 dTVGaVa~D~~G~iAaatST 144 (261)
+..|.|++|.+|+++++.++
T Consensus 95 ~~ggvIa~d~~G~~~~~~n~ 114 (141)
T 1apy_B 95 FFGAVICANVTGSYGAACNK 114 (141)
T ss_dssp CCEEEEEEETTSCEEEEECC
T ss_pred CcEEEEEEeCCCCEEEEecc
Confidence 56799999999999999876
Done!