Query 024894
Match_columns 261
No_of_seqs 134 out of 972
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 16:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024894.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024894hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 g1apy.1 d.153.1.5 (A:,B:) Glyc 100.0 1.1E-70 7.9E-75 501.6 29.7 228 1-259 68-299 (302)
2 g2gac.1 d.153.1.5 (A:,B:) Glyc 100.0 5.9E-66 4.3E-70 464.9 21.8 200 1-256 68-274 (275)
3 g1k2x.1 d.153.1.5 (A:,B:) Glyc 100.0 4.1E-63 3E-67 450.0 22.0 196 1-251 86-282 (291)
4 d2imha1 d.153.1.7 (A:1-229) Hy 93.3 0.15 1.1E-05 42.4 8.6 94 126-239 2-98 (229)
5 g1k2x.1 d.153.1.5 (A:,B:) Glyc 92.1 0.02 1.5E-06 49.7 1.2 43 123-168 249-291 (291)
6 d2nlza1 d.153.1.6 (A:3-539) Ce 91.7 0.6 4.4E-05 42.8 11.3 79 122-207 352-465 (537)
7 d2i3oa1 d.153.1.6 (A:1-516) Hy 80.7 2 0.00015 38.8 8.0 82 121-207 326-440 (516)
8 g2dg5.1 d.153.1.6 (A:37-387,B: 80.0 3.3 0.00024 37.6 9.2 28 122-149 348-375 (541)
9 g2gac.1 d.153.1.5 (A:,B:) Glyc 67.4 1.9 0.00014 36.3 3.6 29 123-151 236-264 (275)
10 g2nqo.1 d.153.1.6 (A:29-375,B: 65.4 12 0.00087 33.5 9.2 26 121-146 343-368 (533)
11 d1ybha1 c.31.1.3 (A:281-459) A 47.7 5.3 0.00039 30.5 2.9 30 22-51 11-47 (179)
12 d2ihta1 c.31.1.3 (A:198-374) C 38.0 12 0.00088 28.1 3.5 29 23-51 12-49 (177)
13 d1t9ba1 c.31.1.3 (A:290-460) A 37.0 9.9 0.00072 28.5 2.9 30 22-51 2-41 (171)
14 d2ji7a1 c.31.1.3 (A:195-369) O 36.4 16 0.0012 27.4 4.1 30 22-51 11-49 (175)
15 d2djia1 c.31.1.3 (A:187-363) P 36.4 12 0.00086 28.2 3.3 31 21-51 11-49 (177)
16 d1pyya4 e.3.1.1 (A:264-631) Pe 33.0 27 0.002 29.1 5.4 42 201-242 5-47 (368)
17 d1q6za1 c.31.1.3 (A:182-341) B 32.3 21 0.0015 26.0 4.1 30 22-51 11-49 (160)
18 d3c2wa1 d.110.2.1 (A:118-309) 31.4 95 0.0069 23.1 8.1 49 186-234 7-55 (192)
19 d1rypg_ d.153.1.4 (G:) Proteas 29.8 90 0.0066 24.2 8.0 49 163-215 150-198 (244)
20 d1irul_ d.153.1.4 (L:) Proteas 29.3 45 0.0033 25.1 5.8 53 175-231 126-183 (201)
21 d2ez9a1 c.31.1.3 (A:183-365) P 28.8 13 0.00096 28.3 2.3 30 22-51 22-58 (183)
22 g1apy.1 d.153.1.5 (A:,B:) Glyc 28.8 19 0.0014 30.2 3.6 25 124-148 255-279 (302)
23 d1ozha1 c.31.1.3 (A:188-366) C 28.6 19 0.0014 27.0 3.3 32 20-51 9-50 (179)
24 d1rypf_ d.153.1.4 (F:) Proteas 28.3 33 0.0024 26.8 4.9 50 163-215 149-198 (233)
25 d1rypl_ d.153.1.4 (L:) Proteas 27.5 80 0.0059 23.7 7.1 54 174-231 126-184 (212)
26 d1okja2 c.55.1.9 (A:107-216) H 27.3 15 0.0011 25.1 2.1 31 17-47 36-66 (110)
27 d1vi9a_ c.72.1.5 (A:) Pyridoxa 26.6 36 0.0026 27.5 4.9 68 142-214 181-252 (288)
28 d1irub_ d.153.1.4 (B:) Proteas 26.2 50 0.0036 25.3 5.6 39 174-216 159-197 (233)
29 d1rypk_ d.153.1.4 (K:) Proteas 26.1 90 0.0066 23.1 7.1 61 164-231 123-188 (198)
30 d1ovma1 c.31.1.3 (A:181-341) I 26.0 26 0.0019 25.7 3.6 29 23-51 22-59 (161)
31 d1ytla1 c.31.1.6 (A:17-174) Ac 25.7 14 0.001 27.6 1.9 25 17-41 6-30 (158)
32 d1j2pa_ d.153.1.4 (A:) Proteas 25.0 44 0.0032 26.1 5.1 46 163-215 150-195 (243)
33 d2uubc2 d.53.1.1 (C:107-207) R 24.9 95 0.0069 21.3 6.3 30 187-216 9-38 (101)
34 d1ryph_ d.153.1.4 (H:) Proteas 24.9 49 0.0036 25.0 5.2 70 153-231 117-191 (205)
35 d1pvda1 c.31.1.3 (A:182-360) P 23.4 23 0.0017 26.5 2.9 29 23-51 23-60 (179)
36 d1iruh_ d.153.1.4 (H:) Proteas 23.3 55 0.004 24.5 5.2 61 164-231 118-183 (202)
37 d2hz5a1 d.110.7.1 (A:5-94) Dyn 22.9 28 0.0021 23.8 2.9 24 208-233 2-25 (90)
38 d1v6sa_ c.86.1.1 (A:) Phosphog 22.6 1.1E+02 0.008 26.0 7.6 64 6-69 184-247 (390)
39 d2oola1 d.110.2.1 (A:140-333) 22.3 1.4E+02 0.01 22.0 7.8 45 189-233 10-54 (194)
40 d1yara1 d.153.1.4 (A:13-233) P 21.1 1E+02 0.0075 23.3 6.6 46 164-216 143-188 (221)
41 d2qalc2 d.53.1.1 (C:106-206) R 20.6 65 0.0047 22.2 4.6 30 187-216 9-38 (101)
42 d2veaa1 d.110.2.1 (A:131-326) 20.2 87 0.0063 23.5 5.8 49 186-234 7-55 (196)
No 1
>g1apy.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.1e-70 Score=501.65 Aligned_cols=228 Identities=49% Similarity=0.837 Sum_probs=212.5
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+||+++||+||||+||++||+++||+ .+++.|+.++++|++|++...+++++++
T Consensus 68 MdG~~~~~GaV~~v~~vknPi~vAr~vme~t~h~~LvG~GA~~fA~~~G~~-~~~~~t~~s~~~~~~~~~~~~~~~~~~~ 146 (302)
T g1apy.1 68 MDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFI-NEDLSTSASQALHSDWLARNCQPNYWRN 146 (302)
T ss_dssp EETTTCCEEEEEEECSCSCHHHHHHHHHHHBSCSEEEHHHHHHHHHHTTCC-CCCCCCHHHHHHHHHHHHTTSCSCCBCS
T ss_pred EEcCCCceeeeecccccccHHHHHHHHHhcCCCcccccccchhhhhhcccc-ccCcccHHHHHHHHHHHHHhcchhhhhc
Confidence 899999999999999999999999999999999999999999999999999 8999999999999999999988887765
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
..+++. .......+|||||||+|.+|+|||||||||+++|+|||||||||
T Consensus 147 ~~~~~~------------------------------~~~~~~~~dTVGaValD~~G~iAaaTSTGG~~~K~pGRVGDspi 196 (302)
T g1apy.1 147 VIPDPS------------------------------KYCGPYKPPTIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPI 196 (302)
T ss_dssp CBSCTT------------------------------TCCSCCBCCCEEEEEECTTSCEEEEEEECCSTTCCTTEECSTTS
T ss_pred cCCccc------------------------------hhcccccCCceeeEEEeCCCCEEeeeCCCCcCCCcCccCCCCcc
Confidence 443320 11234568999999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEcc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHGW 240 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~~ 240 (261)
||||+|||++++||||||+||+|||+++|++|+++|++|++|++|++++|+++.++++++.+|||+||++|+++++||+.
T Consensus 197 iGaG~yAd~~~~avs~TG~GE~iir~~~A~~v~~~~~~g~~~~~A~~~ai~~~~~~~~~~~ggvIavd~~G~~g~a~n~~ 276 (302)
T g1apy.1 197 PGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKL 276 (302)
T ss_dssp BTTTEEEETTTEEEEEEECHHHHGGGCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCB
T ss_pred cccceeccCCceEEEeccccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCceEEEEEEcCCCCEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999888889999999999999999986
Q ss_pred ----eeEEEEEcCCCCceEEEEe
Q 024894 241 ----TFKYSVRSPEMEDVKVFTV 259 (261)
Q Consensus 241 ----~f~~~~~~~~~~~~~~~~~ 259 (261)
.|.|++++.+++++.++.|
T Consensus 277 ~m~~~~~~~v~~~~~~~~~~~~~ 299 (302)
T g1apy.1 277 STFTQFSFMVYNSEKNQPTEEKV 299 (302)
T ss_dssp TTBCEEEEEEECSSCCSCEEEEE
T ss_pred cccCceeEEEEcCCCCCceeEEe
Confidence 4788999999999999887
No 2
>g2gac.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Flavobacterium meningosepticum [TaxId: 238]}
Probab=100.00 E-value=5.9e-66 Score=464.94 Aligned_cols=200 Identities=35% Similarity=0.612 Sum_probs=189.8
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+ +++|||++|++|||||+|||+||+++||+||||+||++||+++||+ +++|+|++++++|++|+
T Consensus 68 Md~~-~~~GaV~~v~~iknPi~~Ar~vme~t~h~~LvG~gA~~fA~~~G~~-~~~~~t~~~~~~~~~~~----------- 134 (275)
T g2gac.1 68 MDEN-YNIGSVACMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQGFK-KENLLTAESEKEWKEWL----------- 134 (275)
T ss_dssp ECTT-SCEEEEEEECSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHHTTCC-CCCCCCHHHHHHHHHHH-----------
T ss_pred EcCC-CceeeeeeecccCCHHHHHHHHHhcCCcccccCHHHHHHHHHcCCC-ccCchhHhhhhhhhhcc-----------
Confidence 8985 9999999999999999999999999999999999999999999999 99999999999999985
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
+||||+||+|.+|+|||+|||||+.+|+|||||||||
T Consensus 135 -------------------------------------------~~TVGava~D~~G~iaaaTSTGG~~~K~pGRVGDspi 171 (275)
T g2gac.1 135 -------------------------------------------KTCIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPI 171 (275)
T ss_dssp -------------------------------------------HCCEEEEEECTTSCEEEEEEECCSTTCCTTBCCSTTS
T ss_pred -------------------------------------------ccccceEEEccCCceeceEcCCCcCceECCCCCCCCc
Confidence 4799999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-------CCCeEEEEEEeCCCCE
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARKF-------PDFVGAVVAINKNGEH 233 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~-------~~~~gGvI~l~~~G~~ 233 (261)
||||+|||++++||||||+||+|||.++|++|+++|++|++|++|++++|+++.+.+ +++.+|+|+||++|++
T Consensus 172 ~GaG~yAd~~~gavs~TG~GE~iir~~~a~~v~~~~~~g~~~~~A~~~ai~~~~~~~~~~g~~~~~~~~G~Iavd~~G~~ 251 (275)
T g2gac.1 172 IGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEY 251 (275)
T ss_dssp BTTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEETTSCE
T ss_pred cccceEEeCCcceEecccccHhHHhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccceeEEEEcCCCCE
Confidence 999999999999999999999999999999999999999999999999999887642 2356899999999999
Q ss_pred EEEEEcceeEEEEEcCCCCceEE
Q 024894 234 AGACHGWTFKYSVRSPEMEDVKV 256 (261)
Q Consensus 234 ~~~~~~~~f~~~~~~~~~~~~~~ 256 (261)
+++|+++.|+|+|++++.+++++
T Consensus 252 ~~~~~t~~m~~av~~~~g~~~e~ 274 (275)
T g2gac.1 252 GAYCIQDGFNFAVHDQKGNRLET 274 (275)
T ss_dssp EEEESSSCCCEEEEETTEEEEEC
T ss_pred EEEEcCCCceEEEECCCCCEecC
Confidence 99999999999999998887763
No 3
>g1k2x.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.1e-63 Score=449.96 Aligned_cols=196 Identities=29% Similarity=0.444 Sum_probs=185.5
Q ss_pred CCCCCCCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Q 024894 1 MNGATMEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWRENGCQPNFWKN 80 (261)
Q Consensus 1 MdG~~~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~~~~~~~~~~~~ 80 (261)
|||+++++|||++|++|||||+|||+|||++||+||||+||++||+++||+ ..++.+..++++|++|+.
T Consensus 86 Mdg~~~~~GaV~~~~~vknPI~vAr~v~e~~~h~~LvG~gA~~fA~~~G~~-~~~~~~~~t~~~~~~~~~---------- 154 (291)
T g1k2x.1 86 MDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGME-RVSPEIFSTSLRYEQLLA---------- 154 (291)
T ss_dssp EETTTCCEEEEEEESSCSCHHHHHHHHHHHSSCSEEEHHHHHHHHHTTTCC-CCCGGGGCCHHHHHHHHH----------
T ss_pred EecCCcceeeeeeccchhhHHHHHHHHhhcCCceeecCchHHHHHHHcCCc-ccCchhhhHHHHHHhccc----------
Confidence 899999999999999999999999999999999999999999999999999 788888888888888753
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCccCCCCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCc
Q 024894 81 VVPVDGCGPYQPKCNMGPSEGECPASNLMGVTESGSSYVGLHSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPI 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi 160 (261)
+||||+||+|.+|++||+|||||+++|+|||||||||
T Consensus 155 -------------------------------------------~~TVGava~D~~G~~aaatSTGG~~~K~~GRVGDspi 191 (291)
T g1k2x.1 155 -------------------------------------------ARTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPL 191 (291)
T ss_dssp -------------------------------------------HCCEEEEEECTTSCEEEEEEECCCTTBCTTEECSTTS
T ss_pred -------------------------------------------cCceeeEEeecCCCEeeeccCCCCcCcCCCccCCCcc
Confidence 5899999999999999999999999999999999999
Q ss_pred cCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHh-CCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEEEEEEc
Q 024894 161 AGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMR-QGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHAGACHG 239 (261)
Q Consensus 161 ~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~-~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~~~~~~ 239 (261)
||||+|||++.+||||||+||+|||+++|++|+++|+ .|++|++|++++++++.+.+. +.+|+|+||++|+++++|||
T Consensus 192 ~GaG~yad~~~~a~s~TG~GE~iir~~~A~~v~~~~~~~g~~~~~A~~~~i~~~~~~~~-~~~GvIaid~~G~v~~a~nt 270 (291)
T g1k2x.1 192 VGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALG-GSGGLIAIDHEGNVALPFNT 270 (291)
T ss_dssp BTTTEEECTTSEEEEEEECHHHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHHTHHHHTT-CCEEEEEEETTCCEECCBSS
T ss_pred cCcceeecCCcceeecchhHHHHHHhhHHHHHHHHHhhcCCCHHHHHHHHHHHHhhhcC-CcEEEEEEcCCCCEEEEecC
Confidence 9999999999999999999999999999999999998 589999999999999877764 57999999999999999999
Q ss_pred ceeEEEEEcCCC
Q 024894 240 WTFKYSVRSPEM 251 (261)
Q Consensus 240 ~~f~~~~~~~~~ 251 (261)
..|+++|.+.+.
T Consensus 271 ~~M~~a~~~~~~ 282 (291)
T g1k2x.1 271 EGMYRAWGYAGD 282 (291)
T ss_dssp SEEEEEEEETTS
T ss_pred chhheeeEcCCC
Confidence 999999987663
No 4
>d2imha1 d.153.1.7 (A:1-229) Hypothetical protein SPO2555 {Silicibacter pomeroyi [TaxId: 89184]}
Probab=93.33 E-value=0.15 Score=42.37 Aligned_cols=94 Identities=21% Similarity=0.242 Sum_probs=58.4
Q ss_pred ceEEEEEcC-CCCEEEEecCCCCCCCcCceecCCCccCcce-eeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHH
Q 024894 126 TISMAVIDK-MGHVAVGTSTNGATFKIPGRVGDGPIAGSSA-YADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPE 203 (261)
Q Consensus 126 TVGaVa~D~-~G~iAaatSTGG~~~K~~GRVGDspi~GaG~-yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~ 203 (261)
|--.|++|. .|.+-+|++|+- +.+|+-+ |+...+|++++=+.=.. ........++|++|.+|+
T Consensus 2 TfSIva~d~~TG~~GvAvaS~~------------~aVG~~vp~~~~gvGavatQ~~~~~---~~~g~~~l~~l~~G~s~~ 66 (229)
T d2imha1 2 TFSILAHDPETGAIGGAAATGS------------LCVGGWVLRGDLNAGMSASQGAAPS---TFWGEEVLQHLRDGSHPE 66 (229)
T ss_dssp EEEEEEEETTTTEEEEEEEESS------------SCHHHHHEEEETTTEEEEEESSSCC---HHHHHHHHHHHHTTCCHH
T ss_pred eEEEEEEcCCCCcEEEEEEecC------------cccceEeeeccCCccEEEeecccCc---chhHHHHHHHHHcCCCHH
Confidence 344678884 478887777764 4456555 66666776655432110 112456788999999999
Q ss_pred HHHHHHHHHHHHhCCC-CeEEEEEEeCCCCEEEEEEc
Q 024894 204 LAAKDAISRIARKFPD-FVGAVVAINKNGEHAGACHG 239 (261)
Q Consensus 204 ~A~~~ai~~~~~~~~~-~~gGvI~l~~~G~~~~~~~~ 239 (261)
++++..++. -++ ..--+-+||.+|+.+ +||.
T Consensus 67 ~al~~l~~~----D~~~~~RQ~~vvD~~G~~A-~~TG 98 (229)
T d2imha1 67 DAVNHVTSQ----DSGRAYRQLAAMDLLGNAA-AFTG 98 (229)
T ss_dssp HHHHHHHHT----CTTGGGCEEEEEETTSCEE-EEEC
T ss_pred HHHHHHHhc----CCCccceeEEEEcCCCCEE-EEEC
Confidence 988887753 111 112344589999875 3443
No 5
>g1k2x.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Escherichia coli [TaxId: 562]}
Probab=92.05 E-value=0.02 Score=49.65 Aligned_cols=43 Identities=28% Similarity=0.390 Sum_probs=35.7
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeee
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYAD 168 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd 168 (261)
..+++|+|++|.+|+++++.||.|+.+-+ .|.+++|.+ +.|.|
T Consensus 249 ~~~~~GvIaid~~G~v~~a~nt~~M~~a~-~~~~~~~~v--~I~~~ 291 (291)
T g1k2x.1 249 LGGSGGLIAIDHEGNVALPFNTEGMYRAW-GYAGDTPTT--GIYRE 291 (291)
T ss_dssp TTCCEEEEEEETTCCEECCBSSSEEEEEE-EETTSCCEE--EEECC
T ss_pred cCCcEEEEEEcCCCCEEEEecCchhheee-EcCCCcEEE--EEeCC
Confidence 45899999999999999999999886655 588888877 56653
No 6
>d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus halodurans [TaxId: 86665]}
Probab=91.67 E-value=0.6 Score=42.81 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=49.9
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCCCCCcCceecCCCccCcceeee---------------------------------
Q 024894 122 HSHDTISMAVIDKMGHVAVGTSTNGATFKIPGRVGDGPIAGSSAYAD--------------------------------- 168 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G~iAaatSTGG~~~K~~GRVGDspi~GaG~yAd--------------------------------- 168 (261)
...+|.-.+++|.+|+.++.|+|-+..|-- |.+ ++|.|+.-+
T Consensus 352 ~~~~Tth~svvD~~GnaVs~T~Si~~~FGS-g~~----~~~tGi~lNN~m~~f~~~~~~~n~~~PgkRp~ssm~Ptiv~~ 426 (537)
T d2nlza1 352 PRGGTVYLATADGDGNMVSFIQSNYMGFGS-GVV----VPGTGIAMQNRGHNFSLDPNHDNALKPGKRTYHTIIPGFLTK 426 (537)
T ss_dssp ----CEEEEEEETTSCEEEEEEECSSTTCS-SCE----ETTTTEEBCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEeccccCCCCC-ceE----eCCCCccccccccccccccccccccCCCcccccccccchhcc
Confidence 457999999999999999999988654321 010 011122111
Q ss_pred -C-ceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 169 -E-EVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 169 -~-~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
+ .+.++.+.| |..|+ ..+++.++..+..|+++++|+.
T Consensus 427 ~~~~~l~~Gs~G-G~~i~-~~~~qvl~~~l~~~~~l~~Ai~ 465 (537)
T d2nlza1 427 NDQPIGPFGVMG-GFMQP-QGHMQVMMNTIDFGLNPQAALD 465 (537)
T ss_dssp SSCEEEEEEECS-GGGHH-HHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCeeEEEECCC-chhHH-HHHHHHHHHHHhcCCCHHHHHh
Confidence 1 134565665 77766 5667788888889999999874
No 7
>d2i3oa1 d.153.1.6 (A:1-516) Hypothetical protein Ta0994 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=80.73 E-value=2 Score=38.78 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=49.8
Q ss_pred CCCCCceEEEEEcCCCCEEEEecCCCCCCC----cC-------ceecCC---------------------CccCcceeee
Q 024894 121 LHSHDTISMAVIDKMGHVAVGTSTNGATFK----IP-------GRVGDG---------------------PIAGSSAYAD 168 (261)
Q Consensus 121 ~~~~dTVGaVa~D~~G~iAaatSTGG~~~K----~~-------GRVGDs---------------------pi~GaG~yAd 168 (261)
....||+-.+++|.+||..+.|+|-+..|- .| -|..+- |++ ..-+
T Consensus 326 ~~~~~Tth~svvD~~GnaVs~T~Si~~~FGSg~~~~~tGi~lNn~~~~f~~~~~~~N~~~PgkRp~ssm~Pti---v~~~ 402 (516)
T d2i3oa1 326 NDIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTLQRDHPNALMPGKRTFHTLAACM---VEKE 402 (516)
T ss_dssp CCCCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEE---EEET
T ss_pred CCCCCCEEEEEECCCCCEEeeccccCCCcCCccccCCCCccccCcccccccCCCCCCcCCCCcccccccccce---eccc
Confidence 345789999999999999999988532221 11 111111 111 0111
Q ss_pred Cc-eeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHH
Q 024894 169 EE-VGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAK 207 (261)
Q Consensus 169 ~~-~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~ 207 (261)
++ ..++.+.| |. .|-..+++.+...+..++++++|++
T Consensus 403 g~~~l~~Gs~G-G~-~i~~~~~qvl~~~l~~~~~~q~Ai~ 440 (516)
T d2i3oa1 403 HDLYASLGSMG-GD-IQPQVQMQILMEILKDNTDPQAILD 440 (516)
T ss_dssp TEEEEEEEECC-ST-THHHHHHHHHHHHTTCCSCHHHHHH
T ss_pred CcceeEEecCC-Cc-chHHHHHHHHHHHHhcCCCHHHHHh
Confidence 11 33445554 44 4455566788888889999999995
No 8
>g2dg5.1 d.153.1.6 (A:37-387,B:391-580) Gamma-glutamyltranspeptidase, GGT {Escherichia coli [TaxId: 562]}
Probab=79.97 E-value=3.3 Score=37.58 Aligned_cols=28 Identities=32% Similarity=0.353 Sum_probs=23.6
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCCCC
Q 024894 122 HSHDTISMAVIDKMGHVAVGTSTNGATF 149 (261)
Q Consensus 122 ~~~dTVGaVa~D~~G~iAaatSTGG~~~ 149 (261)
...||+-.+++|.+|+.++.|+|-+..|
T Consensus 348 ~~~~Tt~~sv~D~~GnaVs~t~S~~~~f 375 (541)
T g2dg5.1 348 APYETTHYSVVDKDGNAVAVTYTLNTTF 375 (541)
T ss_dssp GGGCCEEEEEECTTSCEEEEEEECSSTT
T ss_pred CCCCceEEEEEcCCCCEEEEeccCCCCc
Confidence 3479999999999999999999965543
No 9
>g2gac.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Flavobacterium meningosepticum [TaxId: 238]}
Probab=67.35 E-value=1.9 Score=36.35 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=25.2
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCCCCCc
Q 024894 123 SHDTISMAVIDKMGHVAVGTSTNGATFKI 151 (261)
Q Consensus 123 ~~dTVGaVa~D~~G~iAaatSTGG~~~K~ 151 (261)
..+++|.|++|.+|+++++.+|.++.+-.
T Consensus 236 ~~~~~G~Iavd~~G~~~~~~~t~~m~~av 264 (275)
T g2gac.1 236 KDIQVGFIALNKKGEYGAYCIQDGFNFAV 264 (275)
T ss_dssp GGCCEEEEEEETTSCEEEEESSSCCCEEE
T ss_pred cccceeEEEEcCCCCEEEEEcCCCceEEE
Confidence 36899999999999999999998877544
No 10
>g2nqo.1 d.153.1.6 (A:29-375,B:380-565) Gamma-glutamyltranspeptidase, GGT {Helicobacter pylori [TaxId: 210]}
Probab=65.42 E-value=12 Score=33.54 Aligned_cols=26 Identities=23% Similarity=0.208 Sum_probs=22.2
Q ss_pred CCCCCceEEEEEcCCCCEEEEecCCC
Q 024894 121 LHSHDTISMAVIDKMGHVAVGTSTNG 146 (261)
Q Consensus 121 ~~~~dTVGaVa~D~~G~iAaatSTGG 146 (261)
....||+..+++|.+||.++.|+|=+
T Consensus 343 ~~~~~Tth~svvD~~GnaVs~t~Si~ 368 (533)
T g2nqo.1 343 MGQLHTTHYSVADRWGNAVSVTYTIN 368 (533)
T ss_dssp GGCCCCEEEEEEETTSCEEEEEEECS
T ss_pred cccCCCeeeEEECCCCCEeeeccccc
Confidence 34579999999999999999998844
No 11
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=47.66 E-value=5.3 Score=30.46 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=22.7
Q ss_pred HHHHHHhhcCCCeEEecHHH-------HHHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKA-------SAFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA-------~~fA~~~G~~ 51 (261)
.++..+.+-..|++++|.|+ .+||+..|+|
T Consensus 11 ~~~~~L~~AkrPvii~G~G~~~a~~~l~~lae~~~~P 47 (179)
T d1ybha1 11 QIVRLISESKKPVLYVGGGCLNSSDELGRFVELTGIP 47 (179)
T ss_dssp HHHHHHHHCSSEEEEECGGGTTCHHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCeEEEECHHHHHHHHHHHHHHhhhccc
Confidence 35556666668999999887 6777777776
No 12
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=37.98 E-value=12 Score=28.07 Aligned_cols=29 Identities=31% Similarity=0.454 Sum_probs=20.9
Q ss_pred HHHHHhhcCCCeEEecHHHH---------HHHHHCCCC
Q 024894 23 AARLVMQHTEHTLLAGEKAS---------AFAIAMGLP 51 (261)
Q Consensus 23 lAr~Vme~t~h~~LvG~gA~---------~fA~~~G~~ 51 (261)
++..+.+-..|++|+|.|+. +||+..|+|
T Consensus 12 a~~lL~~AkrPvii~G~g~~~~~a~~~l~~lae~~~iP 49 (177)
T d2ihta1 12 AAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIP 49 (177)
T ss_dssp HHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCCEEEEECcCcchhhhHHHHHHHhhcceEE
Confidence 44555555689999998873 567777776
No 13
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.99 E-value=9.9 Score=28.46 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=23.1
Q ss_pred HHHHHHhhcCCCeEEecHHH----------HHHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKA----------SAFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA----------~~fA~~~G~~ 51 (261)
++|..+.+-..|++|+|.|+ .+||+.+|+|
T Consensus 2 kaa~lL~~AkrPvii~G~G~~~~~~a~~~l~~lae~~g~P 41 (171)
T d1t9ba1 2 KAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIP 41 (171)
T ss_dssp HHHHHHHTCSSEEEEECGGGGGSTTHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCeEEEECcChhhhhhHHHHHHHHHHhcCCc
Confidence 46777777779999999875 2678888887
No 14
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=36.44 E-value=16 Score=27.36 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=22.4
Q ss_pred HHHHHHhhcCCCeEEecHHHH---------HHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKAS---------AFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA~---------~fA~~~G~~ 51 (261)
.++..|.+-..|++++|.|+. +||+.+|+|
T Consensus 11 ~a~~~L~~A~rPvii~G~g~~~~~a~~~l~~lae~~~iP 49 (175)
T d2ji7a1 11 RAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIP 49 (175)
T ss_dssp HHHHHHHTCSSCEEEECHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCEEEEECCCccccccHHHHHHHhhhceee
Confidence 455666666799999998873 577777777
No 15
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=36.36 E-value=12 Score=28.22 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=21.3
Q ss_pred HHHH-HHHhhcCCCeEEecHHH-------HHHHHHCCCC
Q 024894 21 IRAA-RLVMQHTEHTLLAGEKA-------SAFAIAMGLP 51 (261)
Q Consensus 21 I~lA-r~Vme~t~h~~LvG~gA-------~~fA~~~G~~ 51 (261)
|.-| ..+.+-..|++++|.|+ .+||+.+|+|
T Consensus 11 i~~~~~~l~~Ak~Pvii~G~g~~~a~~~l~~lae~l~~P 49 (177)
T d2djia1 11 IDAAVELLNNSKRPVIYAGIGTMGHGPAVQELARKIKAP 49 (177)
T ss_dssp HHHHHHHHHTCSSEEEEECGGGTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCEEEEECcChhhHHHHHHHhhhccceE
Confidence 4444 44444458999999874 6778887777
No 16
>d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=33.01 E-value=27 Score=29.08 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEEeC-CCCEEEEEEccee
Q 024894 201 GPELAAKDAISRIARKFPDFVGAVVAINK-NGEHAGACHGWTF 242 (261)
Q Consensus 201 s~~~A~~~ai~~~~~~~~~~~gGvI~l~~-~G~~~~~~~~~~f 242 (261)
++|+.+++.|+...+++....+.+|++|. .|++-+..+.|+|
T Consensus 5 ~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~ 47 (368)
T d1pyya4 5 PLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTF 47 (368)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEEEEECCCCcEEEEEeCCCC
Confidence 46777888887766666667788889997 4998776666654
No 17
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=32.30 E-value=21 Score=25.96 Aligned_cols=30 Identities=10% Similarity=0.202 Sum_probs=22.4
Q ss_pred HHHHHHhhcCCCeEEecHHHH---------HHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKAS---------AFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA~---------~fA~~~G~~ 51 (261)
.+++++..-..|+||+|.|+. +||+..|+|
T Consensus 11 ~~~~~l~~A~rPvii~G~g~~~~~~~~~l~~lae~l~~p 49 (160)
T d1q6za1 11 ILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAP 49 (160)
T ss_dssp HHHHHHHHCSSCEEEECHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCEEEEECcCccccccchHHHHHHHhcCce
Confidence 456666666799999999975 467777775
No 18
>d3c2wa1 d.110.2.1 (A:118-309) Bacteriophytochrome BphP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.45 E-value=95 Score=23.06 Aligned_cols=49 Identities=4% Similarity=-0.065 Sum_probs=39.3
Q ss_pred hhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEE
Q 024894 186 FLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHA 234 (261)
Q Consensus 186 ~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~ 234 (261)
+..+.+|..++++..++++=++.++.++.+.++-+-.-|+=.+.+++.-
T Consensus 7 ~~~~~ri~~~Ir~sldl~~Il~ttv~evr~lL~~DRV~IYqf~~d~~g~ 55 (192)
T d3c2wa1 7 TLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGE 55 (192)
T ss_dssp HTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCSEEEEEEECTTSCEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcE
Confidence 3457889999999999999999999999998765656666677776543
No 19
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.78 E-value=90 Score=24.21 Aligned_cols=49 Identities=24% Similarity=0.184 Sum_probs=32.9
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR 215 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~ 215 (261)
.|.|-... ++++|.|+..++..|=+ ..+.-+.+++.+||.+.+++-|..
T Consensus 150 ~Gs~~~~~---~~a~G~gs~~~~~~Lek-~~~~~~~~mt~eeai~la~~~L~~ 198 (244)
T d1rypg_ 150 SGSYWGYK---GAATGKGRQSAKAELEK-LVDHHPEGLSAREAVKQAAKIIYL 198 (244)
T ss_dssp TSCEEEBS---EEEESTTHHHHHHHHHH-HHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred CccEEecC---eEecCCccHHHHHHHHH-HHhhCCCCCCHHHHHHHHHHHHHH
Confidence 35565543 23579999988876632 223445789999999988876644
No 20
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.32 E-value=45 Score=25.07 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=34.5
Q ss_pred eccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH---Hh--CCCCeEEEEEEeCCC
Q 024894 175 GATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA---RK--FPDFVGAVVAINKNG 231 (261)
Q Consensus 175 s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~---~~--~~~~~gGvI~l~~~G 231 (261)
+++|.|..+++..|= ...+.+++.+||.+.+++-|. ++ ..+...-|..++++|
T Consensus 126 ~a~G~g~~~~~~~Le----~~~~~~ms~eea~~l~~~~l~~~~~~d~~sg~~~~v~~i~~~G 183 (201)
T d1irul_ 126 FSVGSGSVYAYGVMD----RGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 183 (201)
T ss_dssp EEESTTHHHHHHHHH----TTCCTTCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEECSSC
T ss_pred EEecCchHHHHHHHH----hhccCCCCHHHHHHHHHHHHHHHHHhCCCCCCceEEEEEeCCc
Confidence 367999988777542 123467899998877766543 32 234445556678887
No 21
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=28.82 E-value=13 Score=28.32 Aligned_cols=30 Identities=13% Similarity=0.283 Sum_probs=20.9
Q ss_pred HHHHHHhhcCCCeEEecHHH-------HHHHHHCCCC
Q 024894 22 RAARLVMQHTEHTLLAGEKA-------SAFAIAMGLP 51 (261)
Q Consensus 22 ~lAr~Vme~t~h~~LvG~gA-------~~fA~~~G~~ 51 (261)
++|..|.+-..|++++|.|+ .+||+..|+|
T Consensus 22 ~~~~~L~~A~rPvii~G~G~~~a~~~l~~lae~~~~P 58 (183)
T d2ez9a1 22 RLTQTLLAAERPLIYYGIGARKAGKELEQLSKTLKIP 58 (183)
T ss_dssp HHHHHHHHCSSEEEEECGGGTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCeEEEEcCCcccchHHHHHHhhccceE
Confidence 45566666679999999876 3566666665
No 22
>g1apy.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.79 E-value=19 Score=30.18 Aligned_cols=25 Identities=4% Similarity=-0.092 Sum_probs=21.7
Q ss_pred CCceEEEEEcCCCCEEEEecCCCCC
Q 024894 124 HDTISMAVIDKMGHVAVGTSTNGAT 148 (261)
Q Consensus 124 ~dTVGaVa~D~~G~iAaatSTGG~~ 148 (261)
.++.|.|++|.+|+++++.+|-++.
T Consensus 255 ~~~ggvIavd~~G~~g~a~n~~~m~ 279 (302)
T g1apy.1 255 EFFGAVICANVTGSYGAACNKLSTF 279 (302)
T ss_dssp TCCEEEEEEETTSCEEEEECCBTTB
T ss_pred CceEEEEEEcCCCCEEEEecccccc
Confidence 4678999999999999999887764
No 23
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=28.65 E-value=19 Score=27.03 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=21.8
Q ss_pred HHHHHHHHhh-cCCCeEEecHHH---------HHHHHHCCCC
Q 024894 20 GIRAARLVMQ-HTEHTLLAGEKA---------SAFAIAMGLP 51 (261)
Q Consensus 20 PI~lAr~Vme-~t~h~~LvG~gA---------~~fA~~~G~~ 51 (261)
-|.-|..++. -..|++|+|.|+ .+||+..|+|
T Consensus 9 ~i~~~~~~L~~AkrPvii~G~g~~~~~a~~~l~~lae~~giP 50 (179)
T d1ozha1 9 AIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIP 50 (179)
T ss_dssp HHHHHHHHHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCCEEEEEchhhChhhHHHHHHHHHHhccce
Confidence 3444444444 458899999885 3778888887
No 24
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.33 E-value=33 Score=26.78 Aligned_cols=50 Identities=12% Similarity=0.017 Sum_probs=38.0
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR 215 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~ 215 (261)
.|+|..-. .+++|.|+.+++..|=+..-+..+..++.+||++.+++-|..
T Consensus 149 ~G~~~~~~---~~aiG~gs~~a~~~Le~~~~~~~~~dms~eeai~l~~~~l~~ 198 (233)
T d1rypf_ 149 SGNVTELY---GTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQ 198 (233)
T ss_dssp TSCEEEES---EEEESTTHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHTT
T ss_pred ccceeccc---EEEecCchHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHH
Confidence 45666533 346799999999888776666667789999999988887754
No 25
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.51 E-value=80 Score=23.74 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=34.8
Q ss_pred EeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH---Hh--CCCCeEEEEEEeCCC
Q 024894 174 CGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA---RK--FPDFVGAVVAINKNG 231 (261)
Q Consensus 174 ~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~---~~--~~~~~gGvI~l~~~G 231 (261)
..++|.|..+++..|= ...+.+++++||.+-+++-|. .+ +.+...-|-+++++|
T Consensus 126 ~~a~G~gs~~~~~~Le----~~~~~~mt~~ea~~l~~~al~~~~~rd~~sg~~v~v~vi~~~g 184 (212)
T d1rypl_ 126 IFCVGSGQTFAYGVLD----SNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDG 184 (212)
T ss_dssp EEEESTTHHHHHHHHH----HHCCTTCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEEETTE
T ss_pred eEEEccCcccchhHHH----HhccCCCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCc
Confidence 4578999887776543 223468999998887766543 22 233445555678887
No 26
>d1okja2 c.55.1.9 (A:107-216) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=27.29 E-value=15 Score=25.08 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=24.2
Q ss_pred CccHHHHHHHHhhcCCCeEEecHHHHHHHHH
Q 024894 17 VKDGIRAARLVMQHTEHTLLAGEKASAFAIA 47 (261)
Q Consensus 17 iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~ 47 (261)
|-+|-.+...+-+...++++||+|+..+...
T Consensus 36 v~~~~~l~~~l~~~~~~~~~vG~g~~~~~~~ 66 (110)
T d1okja2 36 VLKPEIVHERMQQLSGEWVTVGTGWQAWPDL 66 (110)
T ss_dssp EECHHHHHHHHTTCCSEEEEESHHHHHCTTS
T ss_pred EECHHHHHHHHhhcCCCEEEEecHHHHHHHH
Confidence 4467777777766678999999999988653
No 27
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}
Probab=26.62 E-value=36 Score=27.46 Aligned_cols=68 Identities=15% Similarity=0.109 Sum_probs=40.8
Q ss_pred ecCCCCCCCcCceecCCCccCcceeeeC----ceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024894 142 TSTNGATFKIPGRVGDGPIAGSSAYADE----EVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA 214 (261)
Q Consensus 142 tSTGG~~~K~~GRVGDspi~GaG~yAd~----~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~ 214 (261)
++.++......+++++.-.-+-+.|.-. +.-....+|.|+.|.=..++ .|.+|.++.+|++.|...+.
T Consensus 181 vt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GtGD~fsa~l~a-----~l~~G~~l~~A~~~A~~~v~ 252 (288)
T d1vi9a_ 181 VKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLV-----KLLQGATLQEALEHVTAAVY 252 (288)
T ss_dssp ECCCGGGSSSTTEEEEEEECSSCEEEEEEECCCCTTCCCSCHHHHHHHHHHH-----HHHTTCCHHHHHHHHHHHHH
T ss_pred EEecCccccccCceeEEEEeCCceEEecccccccCCCCCCChhHHHHHHHHH-----HHHcCCCHHHHHHHHHHHHH
Confidence 3333444455566665444444444321 11123568999987665554 46789999999999987543
No 28
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.20 E-value=50 Score=25.32 Aligned_cols=39 Identities=15% Similarity=0.104 Sum_probs=29.9
Q ss_pred EeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 024894 174 CGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARK 216 (261)
Q Consensus 174 ~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~ 216 (261)
++++|.|..+++..|- +..+.+++.+||++.+++-|...
T Consensus 159 ~~a~G~gs~~~~~~Le----~~~~~~ms~eea~~l~~~~L~~~ 197 (233)
T d1irub_ 159 ATAMGKNYVNGKTFLE----KRYNEDLELEDAIHTAILTLKES 197 (233)
T ss_dssp EEEESTTHHHHHHHHH----HHCCTTCCHHHHHHHHHHHHHTT
T ss_pred ceecCCcHHHHHHHHH----hhcccCccHHHHHHHHHHHHHHH
Confidence 3467999999887764 34558899999999888877553
No 29
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.15 E-value=90 Score=23.10 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=35.7
Q ss_pred ceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHH---HHHHHHhC--CCCeEEEEEEeCCC
Q 024894 164 SAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDA---ISRIARKF--PDFVGAVVAINKNG 231 (261)
Q Consensus 164 G~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~a---i~~~~~~~--~~~~gGvI~l~~~G 231 (261)
|+|.... .+++|.|..+++..|= +..+..++.+||.+.+ |+.+.++. .+...=|.+++++|
T Consensus 123 G~~~~~~---~~a~G~gs~~~~~~Le----~~~~~~~~~eea~~l~~~~l~~~~~~d~~s~~~~~v~vi~~dG 188 (198)
T d1rypk_ 123 GTKVELP---YGAHGYSGFYTFSLLD----HHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDG 188 (198)
T ss_dssp CCEEECS---EEECTTHHHHHHHHHH----HHCCTTCCHHHHHHHHHHHHHHHHHHCSBCCCCEEEEEEETTE
T ss_pred ccEEecc---eEEEeccchhhHHHHH----hcccccCCHHHHHHHHHHHHHHHHHhcCcCCCcEEEEEEcCCC
Confidence 5555443 3468999888776544 2344678999986654 44444442 22223344567776
No 30
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=26.02 E-value=26 Score=25.66 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=19.9
Q ss_pred HHHHHhhcCCCeEEecHHHH---------HHHHHCCCC
Q 024894 23 AARLVMQHTEHTLLAGEKAS---------AFAIAMGLP 51 (261)
Q Consensus 23 lAr~Vme~t~h~~LvG~gA~---------~fA~~~G~~ 51 (261)
++.++-.-..|++|+|.|+. +|+++.|+|
T Consensus 22 a~~~l~~AkrP~il~G~gv~~~~a~~~l~~l~e~~~iP 59 (161)
T d1ovma1 22 AENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMA 59 (161)
T ss_dssp HHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCE
T ss_pred HHHHHHcCCCcEEEECcCcChhhhHHHHHHHHHhcCcc
Confidence 33444545699999999875 456666666
No 31
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.68 E-value=14 Score=27.64 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=21.4
Q ss_pred CccHHHHHHHHhhcCCCeEEecHHH
Q 024894 17 VKDGIRAARLVMQHTEHTLLAGEKA 41 (261)
Q Consensus 17 iknPI~lAr~Vme~t~h~~LvG~gA 41 (261)
+.++-.+|+.+-+-..|++++|.|+
T Consensus 6 ~e~~~~~a~~i~~AkrPvii~G~g~ 30 (158)
T d1ytla1 6 LEKGKPVANMIKKAKRPLLIVGPDM 30 (158)
T ss_dssp CCCHHHHHHHHHHCSSEEEEECSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECcCh
Confidence 5567789999998889999999876
No 32
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.97 E-value=44 Score=26.15 Aligned_cols=46 Identities=15% Similarity=0.081 Sum_probs=31.5
Q ss_pred cceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 024894 163 SSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIAR 215 (261)
Q Consensus 163 aG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~ 215 (261)
.|+|.... .+++|.|..+++..|=. ..+..++.+||.+-+++-+..
T Consensus 150 ~G~~~~~~---~~a~G~g~~~a~~~Le~----~y~~~ms~eeai~la~~~l~~ 195 (243)
T d1j2pa_ 150 SGALLEYK---ATAIGMGRMAVTEFFEK----EYRDDLSFDDAMVLGLVAMGL 195 (243)
T ss_dssp TCCEEEBS---EEEESTTHHHHHHHHHH----HCCTTCCHHHHHHHHHHHHHH
T ss_pred cCceeeee---EEEeCCCcHHHHHHHHh----hcccCCCHHHHHHHHHHHHHH
Confidence 35555433 33579999987766542 234789999999988876654
No 33
>d2uubc2 d.53.1.1 (C:107-207) Ribosomal protein S3 C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.92 E-value=95 Score=21.30 Aligned_cols=30 Identities=20% Similarity=0.305 Sum_probs=26.7
Q ss_pred hhHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 024894 187 LPCYQTVESMRQGMGPELAAKDAISRIARK 216 (261)
Q Consensus 187 ~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~ 216 (261)
.+|..|+..|+++.+...|+..+|+.+.+.
T Consensus 9 ~vA~~Ia~~Ler~~~fRra~~~~l~~~m~~ 38 (101)
T d2uubc2 9 LVAQRVAEQIERRFAVRRAIKQAVQRVMES 38 (101)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHhhhc
Confidence 468899999999999999999999988764
No 34
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.90 E-value=49 Score=25.03 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=40.7
Q ss_pred ceecCCCccCcceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHH---Hh--CCCCeEEEEEE
Q 024894 153 GRVGDGPIAGSSAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIA---RK--FPDFVGAVVAI 227 (261)
Q Consensus 153 GRVGDspi~GaG~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~---~~--~~~~~gGvI~l 227 (261)
+++...--.| .|-... ..++|.|..++...|=+ ..+..++++||.+-+++-|. ++ +.+...=|.++
T Consensus 117 p~Ly~~d~~G--~~~~~~---~~a~G~g~~~~~~~Le~----~~~~~ms~~ea~~l~~~al~~a~~rD~~sg~~v~v~ii 187 (205)
T d1ryph_ 117 GEVYTIPLGG--SVHKLP---YAIAGSGSTFIYGYCDK----NFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 187 (205)
T ss_dssp EEEEEECTTS--CCEEES---EEEESGGGGGGHHHHHH----HCCTTCCHHHHHHHHHHHHHHHHHHBTTCCSCEEEEEE
T ss_pred cEEEEECCCC--cEEecC---eEEeecCcHHHHHHHHh----hhhcccCHHHHHHHHHHHHHHHHHhcCcCCCCEEEEEE
Confidence 4555554343 343322 44679998777665532 33578999998877665443 22 22333344567
Q ss_pred eCCC
Q 024894 228 NKNG 231 (261)
Q Consensus 228 ~~~G 231 (261)
+++|
T Consensus 188 tk~G 191 (205)
T d1ryph_ 188 TAAG 191 (205)
T ss_dssp ETTE
T ss_pred cCCc
Confidence 8887
No 35
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.38 E-value=23 Score=26.49 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=20.0
Q ss_pred HHHHHhhcCCCeEEecHHH---------HHHHHHCCCC
Q 024894 23 AARLVMQHTEHTLLAGEKA---------SAFAIAMGLP 51 (261)
Q Consensus 23 lAr~Vme~t~h~~LvG~gA---------~~fA~~~G~~ 51 (261)
++.+|.+-..|++|+|.|+ .+||+..|+|
T Consensus 23 ~~~~l~~AkrPvii~G~g~~~~~a~~~l~~lae~~~~P 60 (179)
T d1pvda1 23 ILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFP 60 (179)
T ss_dssp HHHHHHHCSSEEEEECGGGTTTSTHHHHHHHHHHHCCC
T ss_pred HHHHHHhCCCCEEEEecccchhhhHHHHHHHHHhhCce
Confidence 4455555568999999876 3466666665
No 36
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.31 E-value=55 Score=24.51 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=37.8
Q ss_pred ceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHH---HHh--CCCCeEEEEEEeCCC
Q 024894 164 SAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRI---ARK--FPDFVGAVVAINKNG 231 (261)
Q Consensus 164 G~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~---~~~--~~~~~gGvI~l~~~G 231 (261)
|.|-... .+++|.|..+++..+-+ ..+..++.++|.+-+.+-| .++ ..+...=|.+++++|
T Consensus 118 g~~~~~~---~~a~G~g~~~a~~~L~~----~~~~~~~~~ea~~l~~~al~~a~~rD~~sg~~i~v~vi~~~G 183 (202)
T d1iruh_ 118 GMMVRQS---FAIGGSGSSYIYGYVDA----TYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESG 183 (202)
T ss_dssp SCCEECS---EEEESGGGGGGHHHHHH----HCCTTCCHHHHHHHHHHHHHHHHHHBTTCCSCEEEEEEETTE
T ss_pred Cceeecc---eeEEeCCHHHHHHHHHH----hhccCCcHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEEeCCC
Confidence 4454433 34689999888766554 2347889999877665544 333 223334556788887
No 37
>d2hz5a1 d.110.7.1 (A:5-94) Dynein light chain 2A, cytoplasmic {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.92 E-value=28 Score=23.75 Aligned_cols=24 Identities=17% Similarity=0.418 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCCeEEEEEEeCCCCE
Q 024894 208 DAISRIARKFPDFVGAVVAINKNGEH 233 (261)
Q Consensus 208 ~ai~~~~~~~~~~~gGvI~l~~~G~~ 233 (261)
+.+++|..+ .+..|+|++|.+|..
T Consensus 2 etl~Ri~~~--kgV~g~iIln~~G~p 25 (90)
T d2hz5a1 2 ETLKRLQSQ--KGVQGIIVVNTEGIP 25 (90)
T ss_dssp HHHHHHHTS--TTEEEEEEECTTCCE
T ss_pred hHHHHHhcC--CCceEEEEECCCCCE
Confidence 567888765 356899999999976
No 38
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]}
Probab=22.63 E-value=1.1e+02 Score=26.04 Aligned_cols=64 Identities=19% Similarity=0.161 Sum_probs=48.4
Q ss_pred CCeeEEeecCCCccHHHHHHHHhhcCCCeEEecHHHHHHHHHCCCCCCCCCCcHHHHHHHHHHH
Q 024894 6 MEVGAVAAMRFVKDGIRAARLVMQHTEHTLLAGEKASAFAIAMGLPGPANLSSAESMDKWTKWR 69 (261)
Q Consensus 6 ~~~GAV~~v~~iknPI~lAr~Vme~t~h~~LvG~gA~~fA~~~G~~~~~~l~t~~a~~~~~~~~ 69 (261)
.-+=+|-+=..|..=|.+.+.++++-.++++.|--|-.|-..+|++...++.-+...+.+.+..
T Consensus 184 rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~~~~~~~~~~ 247 (390)
T d1v6sa_ 184 RPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLL 247 (390)
T ss_dssp SSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGHHHHHHHH
T ss_pred CceEEEEecccccchHHHHHHHHHhcceeeecccHHHHHHHHcCCccCcchhhhhhhhhhHhHH
Confidence 3344555555588889999999999999999999999999999998655565555444444443
No 39
>d2oola1 d.110.2.1 (A:140-333) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=22.25 E-value=1.4e+02 Score=21.96 Aligned_cols=45 Identities=11% Similarity=-0.106 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCE
Q 024894 189 CYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEH 233 (261)
Q Consensus 189 A~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~ 233 (261)
-.++..+|++..++++-++.++.++.+.++-+-.-|+=.+.+++.
T Consensus 10 l~~i~~~Ir~sldl~~Il~tav~eir~~L~~DRv~Iy~f~~~~~~ 54 (194)
T d2oola1 10 VRVAIRRLQTAADLPTACWIAASEVRRITGFDRIKVYQFAADWSG 54 (194)
T ss_dssp HHHHHHHHHTCCSHHHHHHHHHHHHHHHHCCSEEEEEEECTTSCE
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCEEEEEEEcCCCCc
Confidence 368889999999999999999999998776555555557777654
No 40
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=21.09 E-value=1e+02 Score=23.29 Aligned_cols=46 Identities=11% Similarity=0.109 Sum_probs=32.5
Q ss_pred ceeeeCceeEEeccCchHHHHhhhhHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 024894 164 SAYADEEVGACGATGDGDIMMRFLPCYQTVESMRQGMGPELAAKDAISRIARK 216 (261)
Q Consensus 164 G~yAd~~~~A~s~TG~GE~iir~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~ 216 (261)
|.|.... .+++|.|+.+++..|= ...+.+++.+||.+.+++-|..-
T Consensus 143 G~~~~~~---~~a~G~g~~~~~~~Le----~~~~~~ms~~ea~~la~~~l~~~ 188 (221)
T d1yara1 143 GTINEYK---ATAIGSGKDAVVSFLE----REYKENLPEKEAVTLGIKALKSS 188 (221)
T ss_dssp CCEEEBS---EEEESTTHHHHHHHHH----HHCCTTCCHHHHHHHHHHHHHHT
T ss_pred ccEEEee---EEEECCchHHHHHHHH----HHhhccccHHHHHHHHHHHHHHH
Confidence 5665543 3357999999877653 23457899999999888777553
No 41
>d2qalc2 d.53.1.1 (C:106-206) Ribosomal protein S3 C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.55 E-value=65 Score=22.22 Aligned_cols=30 Identities=17% Similarity=0.089 Sum_probs=26.4
Q ss_pred hhHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 024894 187 LPCYQTVESMRQGMGPELAAKDAISRIARK 216 (261)
Q Consensus 187 ~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~ 216 (261)
.+|..|++.|+++.+...++..+++.+.+.
T Consensus 9 ~vA~~IA~~LErr~~fRr~~~~~i~~~m~~ 38 (101)
T d2qalc2 9 LVADSITSQLERRVMFRRAMKRAVQNAMRL 38 (101)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhc
Confidence 568899999999999999999999887654
No 42
>d2veaa1 d.110.2.1 (A:131-326) Phytochrome-like protein Cph1 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=20.25 E-value=87 Score=23.47 Aligned_cols=49 Identities=8% Similarity=-0.023 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCCEE
Q 024894 186 FLPCYQTVESMRQGMGPELAAKDAISRIARKFPDFVGAVVAINKNGEHA 234 (261)
Q Consensus 186 ~~lA~~i~~~~~~g~s~~~A~~~ai~~~~~~~~~~~gGvI~l~~~G~~~ 234 (261)
+-|-+.++.+||+..++++-++.++.++.+.++-+-.-|.=.+.+|..-
T Consensus 7 ~~L~~~ii~~Ir~Sldl~~Il~tav~eir~lL~~DRV~iy~f~~d~~g~ 55 (196)
T d2veaa1 7 YHMANAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGD 55 (196)
T ss_dssp THHHHHHHHCC----CHHHHHHHHHHHHHHHHCCSEEEEEEECTTSCEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCCcc
Confidence 3466788999999999999999999999987754444554567776543
Done!