Query 024897
Match_columns 261
No_of_seqs 130 out of 442
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 16:20:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 7.1E-98 2E-102 665.7 27.1 239 5-246 2-242 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.5E-97 8E-102 665.0 27.0 237 1-240 25-261 (261)
3 1o9d_A 14-3-3-like protein C; 100.0 5.8E-97 2E-101 664.7 25.8 256 1-259 1-259 (260)
4 3iqu_A 14-3-3 protein sigma; s 100.0 1.2E-96 4E-101 654.1 24.8 230 6-238 7-236 (236)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.6E-94 8.8E-99 639.9 26.8 232 5-239 3-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 5.5E-94 1.9E-98 644.9 24.0 233 4-240 25-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 2.2E-90 7.6E-95 621.5 17.9 229 5-244 27-262 (268)
8 2o8p_A 14-3-3 domain containin 100.0 4.1E-82 1.4E-86 556.9 21.5 215 6-235 2-226 (227)
9 3n71_A Histone lysine methyltr 93.5 0.57 1.9E-05 44.8 11.4 100 97-210 326-425 (490)
10 3nf1_A KLC 1, kinesin light ch 93.4 2.8 9.5E-05 34.5 19.7 58 152-210 170-227 (311)
11 3qwp_A SET and MYND domain-con 93.1 1.5 5E-05 41.0 13.4 64 152-219 346-409 (429)
12 3vtx_A MAMA; tetratricopeptide 92.9 2.5 8.7E-05 32.6 16.6 160 9-206 7-169 (184)
13 3qww_A SET and MYND domain-con 92.5 1 3.4E-05 42.4 11.3 100 97-210 315-414 (433)
14 3edt_B KLC 2, kinesin light ch 92.4 3.6 0.00012 33.1 18.1 58 152-210 144-201 (283)
15 3edt_B KLC 2, kinesin light ch 91.9 1.2 4E-05 36.2 9.9 56 152-208 102-157 (283)
16 3u4t_A TPR repeat-containing p 90.4 6.2 0.00021 32.0 14.2 53 153-206 197-249 (272)
17 3qww_A SET and MYND domain-con 90.1 1.6 5.5E-05 40.9 10.1 59 152-211 315-373 (433)
18 3ulq_A Response regulator aspa 89.8 4.9 0.00017 35.2 12.6 146 47-208 12-173 (383)
19 3u3w_A Transcriptional activat 89.7 8.5 0.00029 32.5 19.2 57 152-210 172-228 (293)
20 3n71_A Histone lysine methyltr 89.3 1.9 6.4E-05 41.2 10.0 59 152-211 326-384 (490)
21 2qfc_A PLCR protein; TPR, HTH, 89.0 9.5 0.00032 32.2 17.1 73 124-208 154-226 (293)
22 3q15_A PSP28, response regulat 88.5 3.7 0.00013 36.1 10.8 75 122-209 98-172 (378)
23 4i17_A Hypothetical protein; T 86.7 11 0.00036 30.1 14.3 60 7-70 7-66 (228)
24 4gcn_A Protein STI-1; structur 86.3 2.1 7.1E-05 32.0 6.8 48 152-208 25-72 (127)
25 3qwp_A SET and MYND domain-con 85.8 0.82 2.8E-05 42.8 5.1 58 152-210 304-361 (429)
26 4g1t_A Interferon-induced prot 85.5 19 0.00065 31.9 16.8 49 152-205 351-399 (472)
27 3hym_B Cell division cycle pro 85.4 14 0.00049 30.4 15.3 45 152-205 253-297 (330)
28 3fp2_A TPR repeat-containing p 84.9 21 0.00072 32.0 17.6 49 151-208 444-492 (537)
29 1fch_A Peroxisomal targeting s 84.4 18 0.00061 30.6 15.1 60 7-71 98-157 (368)
30 4a1s_A PINS, partner of inscut 83.1 22 0.00075 30.7 22.4 190 8-210 49-255 (411)
31 2gw1_A Mitochondrial precursor 81.1 29 0.00098 30.7 16.0 55 151-206 205-265 (514)
32 3rkv_A Putative peptidylprolyl 81.0 2.4 8.3E-05 32.4 5.3 54 152-206 28-91 (162)
33 3sf4_A G-protein-signaling mod 80.6 26 0.00088 29.8 21.0 189 8-209 10-218 (406)
34 3ro2_A PINS homolog, G-protein 79.9 23 0.00078 28.8 21.2 190 8-210 6-215 (338)
35 4eqf_A PEX5-related protein; a 79.5 25 0.00085 29.9 11.8 59 7-70 99-157 (365)
36 4gco_A Protein STI-1; structur 78.0 6.6 0.00022 29.2 6.8 46 152-206 30-75 (126)
37 4eqf_A PEX5-related protein; a 76.7 34 0.0012 29.0 15.8 58 8-70 66-123 (365)
38 3ro3_A PINS homolog, G-protein 75.9 19 0.00065 25.7 10.7 56 152-210 66-121 (164)
39 4abn_A Tetratricopeptide repea 75.8 48 0.0016 30.3 17.2 173 8-206 103-286 (474)
40 4a1s_A PINS, partner of inscut 74.8 40 0.0014 29.0 18.1 27 9-35 88-114 (411)
41 2pl2_A Hypothetical conserved 74.7 31 0.0011 27.6 13.6 57 8-69 6-62 (217)
42 4b4t_Q 26S proteasome regulato 74.7 42 0.0014 29.1 17.7 57 152-210 192-248 (434)
43 4gcn_A Protein STI-1; structur 74.2 9.8 0.00034 28.1 6.8 52 152-205 59-110 (127)
44 1elr_A TPR2A-domain of HOP; HO 73.9 10 0.00035 26.4 6.6 53 152-206 55-107 (131)
45 4g1t_A Interferon-induced prot 73.7 7.2 0.00025 34.7 6.9 53 152-205 68-121 (472)
46 3ro2_A PINS homolog, G-protein 73.6 35 0.0012 27.7 19.2 55 152-209 200-254 (338)
47 2xpi_A Anaphase-promoting comp 73.1 55 0.0019 29.8 19.0 46 152-206 533-578 (597)
48 3ieg_A DNAJ homolog subfamily 72.5 40 0.0014 27.8 18.8 46 152-206 289-334 (359)
49 3sf4_A G-protein-signaling mod 72.1 44 0.0015 28.2 20.6 26 10-35 50-75 (406)
50 2q7f_A YRRB protein; TPR, prot 71.8 34 0.0011 26.7 17.1 59 7-70 57-115 (243)
51 3lf9_A 4E10_D0_1IS1A_001_C (T1 71.5 21 0.00071 27.9 8.0 89 21-114 11-103 (121)
52 2l6j_A TPR repeat-containing p 70.9 14 0.00047 25.3 6.6 45 152-205 21-65 (111)
53 3uq3_A Heat shock protein STI1 70.7 36 0.0012 26.6 14.2 48 152-208 190-237 (258)
54 3u3w_A Transcriptional activat 70.6 31 0.0011 28.9 9.9 53 152-208 132-185 (293)
55 3gw4_A Uncharacterized protein 70.5 15 0.0005 28.2 7.3 73 124-208 65-137 (203)
56 2y4t_A DNAJ homolog subfamily 70.1 54 0.0019 28.4 15.7 46 152-206 312-357 (450)
57 1hz4_A MALT regulatory protein 69.3 15 0.00052 31.5 7.8 55 152-207 110-164 (373)
58 2y4t_A DNAJ homolog subfamily 69.1 57 0.002 28.3 16.0 173 11-206 147-323 (450)
59 1na3_A Designed protein CTPR2; 69.0 19 0.00064 23.6 6.8 46 152-206 26-71 (91)
60 2qfc_A PLCR protein; TPR, HTH, 68.4 19 0.00066 30.2 8.2 188 9-221 77-276 (293)
61 3k9i_A BH0479 protein; putativ 68.0 17 0.00058 25.9 6.8 47 152-207 44-90 (117)
62 2xev_A YBGF; tetratricopeptide 66.9 25 0.00086 24.7 7.5 71 152-234 56-126 (129)
63 2kck_A TPR repeat; tetratricop 66.2 21 0.00072 23.9 6.7 46 152-206 23-68 (112)
64 2dba_A Smooth muscle cell asso 66.1 15 0.00051 26.4 6.2 49 152-206 45-93 (148)
65 3sz7_A HSC70 cochaperone (SGT) 66.0 36 0.0012 25.5 8.6 47 152-207 62-108 (164)
66 2gw1_A Mitochondrial precursor 66.0 69 0.0024 28.1 16.3 48 151-207 431-478 (514)
67 2ho1_A Type 4 fimbrial biogene 65.7 48 0.0016 26.2 14.7 58 9-71 39-96 (252)
68 3rkv_A Putative peptidylprolyl 64.5 42 0.0014 25.1 9.8 70 152-238 80-149 (162)
69 3ieg_A DNAJ homolog subfamily 64.0 60 0.002 26.7 17.3 168 11-207 124-301 (359)
70 2kc7_A BFR218_protein; tetratr 63.9 26 0.00089 23.6 6.9 47 152-206 17-63 (99)
71 3ulq_A Response regulator aspa 63.2 73 0.0025 27.4 19.2 176 12-209 108-295 (383)
72 2xpi_A Anaphase-promoting comp 63.0 89 0.003 28.3 20.5 55 151-207 491-545 (597)
73 3upv_A Heat shock protein STI1 61.1 27 0.00093 24.8 6.8 45 153-206 22-66 (126)
74 2xev_A YBGF; tetratricopeptide 60.5 20 0.00069 25.2 5.9 49 152-206 19-67 (129)
75 3fp2_A TPR repeat-containing p 60.4 92 0.0031 27.6 18.9 54 153-206 213-271 (537)
76 4gyw_A UDP-N-acetylglucosamine 60.1 1.4E+02 0.0047 29.5 16.7 168 8-212 10-179 (723)
77 4gco_A Protein STI-1; structur 59.9 28 0.00095 25.6 6.8 46 152-206 64-109 (126)
78 2hr2_A Hypothetical protein; a 59.7 29 0.001 28.0 7.3 53 152-206 28-85 (159)
79 1xi4_A Clathrin heavy chain; a 59.4 55 0.0019 36.0 11.0 23 183-205 1285-1307(1630)
80 1xnf_A Lipoprotein NLPI; TPR, 59.2 65 0.0022 25.5 14.2 49 153-206 195-243 (275)
81 3hym_B Cell division cycle pro 59.2 71 0.0024 26.0 18.4 55 152-207 210-265 (330)
82 2lni_A Stress-induced-phosphop 58.9 32 0.0011 23.8 6.8 47 152-207 67-113 (133)
83 1fch_A Peroxisomal targeting s 58.4 81 0.0028 26.3 19.2 58 8-70 65-122 (368)
84 3ro3_A PINS homolog, G-protein 58.1 46 0.0016 23.5 16.6 54 152-208 106-159 (164)
85 3q49_B STIP1 homology and U bo 57.8 33 0.0011 24.3 6.8 17 191-207 90-106 (137)
86 3k9i_A BH0479 protein; putativ 57.6 14 0.00046 26.4 4.5 50 152-207 7-56 (117)
87 1elr_A TPR2A-domain of HOP; HO 57.5 36 0.0012 23.3 6.8 49 152-209 21-69 (131)
88 3cv0_A Peroxisome targeting si 57.2 77 0.0026 25.7 17.0 26 9-34 23-48 (327)
89 2vq2_A PILW, putative fimbrial 57.1 62 0.0021 24.6 16.1 166 8-207 9-176 (225)
90 2ifu_A Gamma-SNAP; membrane fu 56.7 89 0.003 26.3 14.6 51 152-205 172-222 (307)
91 3upv_A Heat shock protein STI1 56.5 36 0.0012 24.0 6.8 48 152-208 55-102 (126)
92 2q7f_A YRRB protein; TPR, prot 55.9 69 0.0024 24.8 12.6 58 9-71 25-82 (243)
93 3vtx_A MAMA; tetratricopeptide 55.9 33 0.0011 25.9 6.8 46 152-206 22-67 (184)
94 3cv0_A Peroxisome targeting si 54.4 85 0.0029 25.4 14.7 59 8-71 56-114 (327)
95 3nf1_A KLC 1, kinesin light ch 54.1 84 0.0029 25.2 19.8 26 10-35 72-97 (311)
96 1elw_A TPR1-domain of HOP; HOP 53.9 38 0.0013 22.7 6.2 46 152-206 55-100 (118)
97 1qqe_A Vesicular transport pro 53.4 38 0.0013 28.4 7.4 54 152-208 54-107 (292)
98 2xcb_A PCRH, regulatory protei 53.4 63 0.0022 23.6 8.3 48 152-208 69-116 (142)
99 1lyp_A CAP18; lipopolysacchari 53.3 31 0.0011 20.1 4.5 27 86-112 4-30 (32)
100 2hr2_A Hypothetical protein; a 53.1 25 0.00087 28.4 5.8 78 152-235 74-154 (159)
101 2vgx_A Chaperone SYCD; alterna 52.9 36 0.0012 25.6 6.5 47 152-207 72-118 (148)
102 3uq3_A Heat shock protein STI1 52.9 79 0.0027 24.6 18.0 46 152-206 156-201 (258)
103 2vyi_A SGTA protein; chaperone 52.8 48 0.0016 22.6 6.8 16 191-206 59-74 (131)
104 2vyi_A SGTA protein; chaperone 52.3 50 0.0017 22.5 6.8 47 152-207 63-109 (131)
105 2fbn_A 70 kDa peptidylprolyl i 51.9 48 0.0016 25.7 7.3 49 152-206 55-116 (198)
106 3ma5_A Tetratricopeptide repea 51.5 57 0.0019 22.5 9.5 72 152-238 24-95 (100)
107 1elw_A TPR1-domain of HOP; HOP 51.2 52 0.0018 22.0 6.8 47 152-207 21-67 (118)
108 1ihg_A Cyclophilin 40; ppiase 51.1 17 0.00058 32.6 4.9 54 152-206 240-301 (370)
109 1a17_A Serine/threonine protei 50.9 48 0.0016 24.1 6.8 46 152-206 64-109 (166)
110 3caz_A BAR protein; thermo-aci 50.4 1.2E+02 0.004 25.8 11.6 108 13-167 100-210 (294)
111 1zu2_A Mitochondrial import re 49.1 54 0.0018 26.4 7.2 94 132-239 43-143 (158)
112 2dba_A Smooth muscle cell asso 49.0 53 0.0018 23.2 6.7 46 152-206 82-127 (148)
113 3gyz_A Chaperone protein IPGC; 48.7 40 0.0014 26.0 6.3 46 152-206 87-132 (151)
114 4ga2_A E3 SUMO-protein ligase 48.5 52 0.0018 24.7 6.8 46 152-206 48-93 (150)
115 3qky_A Outer membrane assembly 48.2 1.1E+02 0.0036 24.7 19.3 65 6-74 14-80 (261)
116 1xnf_A Lipoprotein NLPI; TPR, 47.2 1E+02 0.0035 24.3 9.2 46 152-206 94-139 (275)
117 1a17_A Serine/threonine protei 47.1 58 0.002 23.6 6.7 46 152-206 30-75 (166)
118 1na0_A Designed protein CTPR3; 46.7 64 0.0022 21.7 6.8 46 152-206 26-71 (125)
119 2e2e_A Formate-dependent nitri 46.4 57 0.002 24.5 6.8 46 152-206 98-143 (177)
120 1hh8_A P67PHOX, NCF-2, neutrop 44.8 60 0.002 24.9 6.8 46 152-206 54-99 (213)
121 1na0_A Designed protein CTPR3; 44.6 69 0.0024 21.5 6.8 46 152-206 60-105 (125)
122 1p5q_A FKBP52, FK506-binding p 44.6 44 0.0015 29.1 6.5 53 152-205 164-223 (336)
123 2fbn_A 70 kDa peptidylprolyl i 44.3 60 0.0021 25.1 6.7 46 152-206 105-150 (198)
124 1ya0_A SMG-7 transcript varian 44.2 69 0.0024 30.5 8.2 47 131-189 158-210 (497)
125 4gfq_A Ribosome-recycling fact 43.6 45 0.0015 28.4 6.1 69 41-114 127-199 (209)
126 2pl2_A Hypothetical conserved 43.6 1.2E+02 0.0041 24.0 18.8 47 7-57 39-85 (217)
127 3bee_A Putative YFRE protein; 43.5 33 0.0011 24.5 4.6 32 8-42 44-75 (93)
128 3urz_A Uncharacterized protein 43.2 63 0.0021 25.5 6.8 28 7-34 4-31 (208)
129 2ifu_A Gamma-SNAP; membrane fu 43.2 1.5E+02 0.005 24.9 16.0 53 152-208 132-185 (307)
130 1qqe_A Vesicular transport pro 43.0 1.4E+02 0.0049 24.7 15.7 51 152-206 135-186 (292)
131 2lni_A Stress-induced-phosphop 43.0 35 0.0012 23.6 4.7 46 152-206 33-78 (133)
132 1kt0_A FKBP51, 51 kDa FK506-bi 42.8 41 0.0014 30.8 6.2 53 152-206 285-345 (457)
133 2ho1_A Type 4 fimbrial biogene 41.7 1.2E+02 0.0042 23.6 15.1 61 7-72 71-131 (252)
134 3u4t_A TPR repeat-containing p 41.0 1.3E+02 0.0045 23.7 13.0 48 152-208 159-209 (272)
135 3as5_A MAMA; tetratricopeptide 40.9 83 0.0028 22.8 6.8 25 10-34 11-35 (186)
136 3ma5_A Tetratricopeptide repea 40.4 87 0.003 21.5 10.4 61 4-69 4-64 (100)
137 1wao_1 Serine/threonine protei 40.1 57 0.0019 30.1 6.8 27 179-206 76-102 (477)
138 3gyz_A Chaperone protein IPGC; 39.9 81 0.0028 24.2 6.8 46 152-206 53-98 (151)
139 1ge9_A Ribosome recycling fact 38.7 1E+02 0.0035 25.5 7.4 70 41-114 105-174 (184)
140 1dd5_A Ribosome recycling fact 38.5 69 0.0024 26.7 6.3 69 41-114 103-175 (185)
141 1hxi_A PEX5, peroxisome target 37.9 54 0.0019 23.6 5.2 46 152-206 68-113 (121)
142 2c2l_A CHIP, carboxy terminus 37.3 53 0.0018 27.6 5.6 51 155-209 51-103 (281)
143 2crb_A Nuclear receptor bindin 36.8 1.3E+02 0.0045 22.5 8.0 29 20-62 28-56 (97)
144 1ise_A Ribosome recycling fact 36.7 72 0.0025 26.5 6.2 68 41-114 103-175 (185)
145 2v5f_A Prolyl 4-hydroxylase su 36.4 1.1E+02 0.0038 21.5 7.7 53 152-206 22-74 (104)
146 2vgx_A Chaperone SYCD; alterna 36.2 1E+02 0.0036 22.9 6.8 46 152-206 38-83 (148)
147 1is1_A Ribosome recycling fact 36.0 76 0.0026 26.4 6.2 69 41-114 103-175 (185)
148 3as5_A MAMA; tetratricopeptide 35.1 1.3E+02 0.0043 21.8 16.1 48 152-208 127-174 (186)
149 2ond_A Cleavage stimulation fa 34.9 1.6E+02 0.0053 24.6 8.3 48 151-206 115-162 (308)
150 1wqg_A Ribosome recycling fact 34.8 82 0.0028 26.2 6.2 69 41-114 103-175 (185)
151 1eh1_A Ribosome recycling fact 33.9 72 0.0025 26.5 5.7 73 41-114 104-176 (185)
152 1hxi_A PEX5, peroxisome target 32.9 1.3E+02 0.0046 21.4 6.7 46 152-206 34-79 (121)
153 2fo7_A Synthetic consensus TPR 32.8 1.1E+02 0.0038 20.5 6.2 46 152-206 52-97 (136)
154 2yhc_A BAMD, UPF0169 lipoprote 32.5 1.4E+02 0.0048 23.5 7.3 49 152-206 21-69 (225)
155 2wb7_A PT26-6P; extra chromoso 31.5 1.7E+02 0.0058 28.2 8.5 65 138-204 435-513 (526)
156 3q49_B STIP1 homology and U bo 31.2 1.3E+02 0.0046 20.9 9.4 11 153-163 61-71 (137)
157 1hh8_A P67PHOX, NCF-2, neutrop 30.7 87 0.003 23.9 5.6 53 152-205 88-148 (213)
158 2r17_C Vacuolar protein sortin 29.9 27 0.00092 31.3 2.6 39 152-190 212-251 (298)
159 4ga2_A E3 SUMO-protein ligase 29.8 67 0.0023 24.0 4.6 47 151-206 13-59 (150)
160 2r5s_A Uncharacterized protein 29.1 1.8E+02 0.0062 21.8 7.2 34 7-43 108-141 (176)
161 3qky_A Outer membrane assembly 28.3 2.3E+02 0.0077 22.6 12.0 60 11-73 152-222 (261)
162 2e2e_A Formate-dependent nitri 28.1 1.2E+02 0.0042 22.5 5.9 47 152-206 61-109 (177)
163 1p5q_A FKBP52, FK506-binding p 28.1 1.3E+02 0.0044 25.9 6.8 46 152-206 213-258 (336)
164 1w3b_A UDP-N-acetylglucosamine 27.3 2.8E+02 0.0096 23.3 15.4 27 8-34 68-94 (388)
165 2if4_A ATFKBP42; FKBP-like, al 26.5 57 0.0019 28.4 4.1 49 152-206 196-258 (338)
166 3q15_A PSP28, response regulat 26.1 3E+02 0.01 23.4 22.2 53 152-208 239-291 (378)
167 2ooe_A Cleavage stimulation fa 25.7 1.2E+02 0.0041 27.6 6.3 53 151-212 62-114 (530)
168 3gw4_A Uncharacterized protein 25.6 2.1E+02 0.0071 21.3 18.0 56 152-210 124-179 (203)
169 4gyw_A UDP-N-acetylglucosamine 25.5 1.2E+02 0.0043 29.9 6.8 46 152-206 94-139 (723)
170 2fo7_A Synthetic consensus TPR 24.7 1.6E+02 0.0055 19.6 6.2 26 10-35 4-29 (136)
171 4h7y_A Dual specificity protei 24.6 1.4E+02 0.0047 24.4 5.7 73 118-204 10-86 (161)
172 2wh5_A Acyl-COA-binding domain 23.0 95 0.0032 23.4 4.2 36 21-59 10-46 (106)
173 4fhn_B Nucleoporin NUP120; pro 23.0 2.5E+02 0.0087 29.1 8.8 61 11-73 903-965 (1139)
174 2kat_A Uncharacterized protein 22.8 1.9E+02 0.0064 19.8 11.8 60 6-70 18-77 (115)
175 2h6f_A Protein farnesyltransfe 22.1 4.1E+02 0.014 23.5 15.3 58 8-70 98-156 (382)
176 2l6j_A TPR repeat-containing p 21.5 1.8E+02 0.0062 19.1 5.3 62 8-74 5-66 (111)
177 3sz7_A HSC70 cochaperone (SGT) 20.8 2.5E+02 0.0086 20.5 10.8 25 10-34 14-38 (164)
178 2yhc_A BAMD, UPF0169 lipoprote 20.5 3.1E+02 0.011 21.4 19.3 62 8-73 5-68 (225)
179 2c2l_A CHIP, carboxy terminus 20.1 1.3E+02 0.0045 25.0 5.0 27 8-34 5-31 (281)
180 4a5x_A MITD1, MIT domain-conta 20.1 2.4E+02 0.0083 20.0 5.9 26 9-34 18-43 (86)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=7.1e-98 Score=665.73 Aligned_cols=239 Identities=61% Similarity=0.973 Sum_probs=223.9
Q ss_pred CchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchh
Q 024897 5 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDH 84 (261)
Q Consensus 5 ~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~ 84 (261)
.+|+++||+||||+||||||||+.+||+++ +.+++||.||||||||||||+||+||+|||+|++++|+++.+|++.+
T Consensus 2 ~~re~lv~~AklaeqaeRyddM~~~Mk~v~---~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~ 78 (248)
T 3uzd_A 2 VDREQLVQKARLAEQAERYDDMAAAMKNVT---ELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKK 78 (248)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-
T ss_pred CcHHHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHH
Confidence 479999999999999999999999999999 68999999999999999999999999999999999999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCc--chHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHH
Q 024897 85 VSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAA--DSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQ 162 (261)
Q Consensus 85 ~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 162 (261)
++.+++||++|++||..+|++||++||++|||.++++ +++|||+|||||||||+|||..|++|+.++++|++||++|+
T Consensus 79 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~ 158 (248)
T 3uzd_A 79 IEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAH 158 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcCCC
Q 024897 163 DIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQ 242 (261)
Q Consensus 163 ~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e~~ 242 (261)
++|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+||++.+
T Consensus 159 ~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~ 238 (248)
T 3uzd_A 159 EISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ 238 (248)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCc
Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCc
Q 024897 243 DDGT 246 (261)
Q Consensus 243 ~~~~ 246 (261)
++++
T Consensus 239 ~~~~ 242 (248)
T 3uzd_A 239 DDDG 242 (248)
T ss_dssp ----
T ss_pred cccc
Confidence 7663
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.5e-97 Score=665.00 Aligned_cols=237 Identities=74% Similarity=1.107 Sum_probs=227.4
Q ss_pred CCCCCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcC
Q 024897 1 MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRG 80 (261)
Q Consensus 1 ~~~~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~ 80 (261)
|+.+.+|++++|+|||||||||||||+++||+++ +.+++||.||||||||||||+||+||+|||+|++++|+++.+|
T Consensus 25 ~~~m~~re~lv~~AKLaeqaeRYddMv~~MK~v~---~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g 101 (261)
T 3ubw_A 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVA---GMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKG 101 (261)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHHH---hcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccc
Confidence 6667789999999999999999999999999999 6899999999999999999999999999999999999998889
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHH
Q 024897 81 NQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKS 160 (261)
Q Consensus 81 ~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (261)
++.+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|++||++
T Consensus 102 ~~~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~ 181 (261)
T 3ubw_A 102 GEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKA 181 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcC
Q 024897 161 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSD 240 (261)
Q Consensus 161 A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e 240 (261)
|+++|+.+||||||||||||||||||||||+|+|++||.+||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 182 A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 182 ASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99999989999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=5.8e-97 Score=664.67 Aligned_cols=256 Identities=86% Similarity=1.258 Sum_probs=223.7
Q ss_pred CC-CCCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCC--CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhh
Q 024897 1 MA-APSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTG--EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEE 77 (261)
Q Consensus 1 ~~-~~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~--~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~ 77 (261)
|+ .+++|++++|+|||++|||||+||+.+||+++ +.+ ++||.||||||||||||+||+||+|||+|++++|+++
T Consensus 1 ~~~~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~---~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~ 77 (260)
T 1o9d_A 1 MAVAPTAREENVYMAKLAEQAERYEEMVEFMEKVS---NSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 77 (260)
T ss_dssp ----CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHH---HTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHhcCHHHHHHHHHHHH---ccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhh
Confidence 45 45679999999999999999999999999999 577 9999999999999999999999999999999999998
Q ss_pred hcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHH
Q 024897 78 SRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNA 157 (261)
Q Consensus 78 ~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 157 (261)
.+|++.+++.+++||++|++||..+|++||++||++|||.+++++++|||+|||||||||+|||..|++|+.++++|+++
T Consensus 78 ~k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~a 157 (260)
T 1o9d_A 78 SRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTA 157 (260)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhh
Q 024897 158 YKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLW 237 (261)
Q Consensus 158 Y~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW 237 (261)
|++|+++|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|+|+||||||||||+|
T Consensus 158 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlW 237 (260)
T 1o9d_A 158 YKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLW 237 (260)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHh
Confidence 99999999989999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccCCCCchhh
Q 024897 238 TSDMQDDGTDEIKEAPKPEEEK 259 (261)
Q Consensus 238 ~~e~~~~~~~~~~~~~~~~~~~ 259 (261)
+++.++++++.+.++.++.|.|
T Consensus 238 ts~~~~~~~~~~~~~~~~~~~~ 259 (260)
T 1o9d_A 238 TSDMQDDGADEIKEDPKPDEAK 259 (260)
T ss_dssp TC--------------------
T ss_pred hhccCccccccccccccccccc
Confidence 9999888888878877776654
No 4
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.2e-96 Score=654.08 Aligned_cols=230 Identities=60% Similarity=0.956 Sum_probs=226.6
Q ss_pred chhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhH
Q 024897 6 PREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHV 85 (261)
Q Consensus 6 ~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~ 85 (261)
+|+++||+|||||||||||||+++||+++ +.+++||.||||||||||||+||+||+|||+|++++|+++.+|++.++
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~---~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAV---EKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHH---hcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 69999999999999999999999999999 689999999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024897 86 SVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIA 165 (261)
Q Consensus 86 ~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (261)
+.+++||++|++||..+|++||++||++|||.+++++++|||+|||||||||+|||..|++|++++++|++||++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhh
Q 024897 166 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWT 238 (261)
Q Consensus 166 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~ 238 (261)
+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+||
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9899999999999999999999999999999999999999999999999999999999999999999999997
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.6e-94 Score=639.85 Aligned_cols=232 Identities=75% Similarity=1.119 Sum_probs=226.5
Q ss_pred CchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchh
Q 024897 5 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDH 84 (261)
Q Consensus 5 ~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~ 84 (261)
.+|++++|+||||+|||||+||+.+||+++ +.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 3 ~~re~~v~~AklaeqaeRyddm~~~mk~v~---~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~ 79 (234)
T 2br9_A 3 DDREDLVYQAKLAEQAERYDEMVESMKKVA---GMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDK 79 (234)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred chHHHHHHHHHHHHHHhCHHHHHHHHHHHh---cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHH
Confidence 379999999999999999999999999999 67999999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHH
Q 024897 85 VSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDI 164 (261)
Q Consensus 85 ~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 164 (261)
++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 80 ~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 159 (234)
T 2br9_A 80 LKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDI 159 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhc
Q 024897 165 ANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTS 239 (261)
Q Consensus 165 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~ 239 (261)
|+.+||||||+|||||||||||||||+|+|++||.+|++|||+||+++|+|+|++|+|+|+||||||||||+|++
T Consensus 160 A~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 160 AMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 998999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=5.5e-94 Score=644.92 Aligned_cols=233 Identities=67% Similarity=1.055 Sum_probs=225.9
Q ss_pred CCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCC---CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcC
Q 024897 4 PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTG---EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRG 80 (261)
Q Consensus 4 ~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~---~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~ 80 (261)
+++|++++|+|||++|||||+||+.+||+++ +.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|
T Consensus 25 ~~~re~~v~~AkLaeqaeRyddmv~~mk~v~---~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~ 101 (260)
T 2npm_A 25 VNARESNVYMAKLAEQAERYDEMAKYMKDVV---EARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRN 101 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHH---hccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccC
Confidence 3469999999999999999999999999999 567 8999999999999999999999999999999999998888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHH
Q 024897 81 NQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKS 160 (261)
Q Consensus 81 ~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (261)
++.+++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|++||++
T Consensus 102 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~ 181 (260)
T 2npm_A 102 AEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKD 181 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcC
Q 024897 161 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSD 240 (261)
Q Consensus 161 A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e 240 (261)
|+++| .+||||||||||||||||||||||+|+|++||.+|++|||+||+++|+|+||+|+|+|+||||||||||+|+++
T Consensus 182 A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 182 ATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=2.2e-90 Score=621.49 Aligned_cols=229 Identities=22% Similarity=0.434 Sum_probs=196.9
Q ss_pred CchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhh-hhcCc-c
Q 024897 5 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKE-ESRGN-Q 82 (261)
Q Consensus 5 ~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke-~~~~~-~ 82 (261)
.+|++++|+|||||||||||||+.+| + +.+++||.||||||||||||+||+||+|||+|++++|++ +.+|+ +
T Consensus 27 m~r~~lv~~AKLaeqaeRYddMv~~M---~---e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~ 100 (268)
T 3efz_A 27 MKLSEGAYRAKLADMVGNYKDVIKVL---T---ESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNN 100 (268)
T ss_dssp -------------------CHHHHHH---T---C-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHH---H---hcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChH
Confidence 36999999999999999999999999 5 679999999999999999999999999999999999999 68887 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHH
Q 024897 83 DHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQ 162 (261)
Q Consensus 83 ~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 162 (261)
.+++.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|++||++|+
T Consensus 101 ~~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~ 179 (268)
T 3efz_A 101 EFIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDAL 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhcC--CCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhccCCCCchHHHHHHHHHHHhhHhhh
Q 024897 163 DIANAEL--APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE---AISELDTLGEDSYKDSTLIMQLLRDNLTLW 237 (261)
Q Consensus 163 ~~a~~~L--~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~---Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW 237 (261)
++|+++| |||||||||||||||||||||+|+|++||.+||+|||+ ||+++|+|+|++ |+||||||||||+|
T Consensus 180 eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlW 255 (268)
T 3efz_A 180 QRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQW 255 (268)
T ss_dssp HHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHh
Confidence 9999899 99999999999999999999999999999999999999 999999999987 99999999999999
Q ss_pred hcCCCCC
Q 024897 238 TSDMQDD 244 (261)
Q Consensus 238 ~~e~~~~ 244 (261)
+++.++-
T Consensus 256 tsd~~~~ 262 (268)
T 3efz_A 256 EQGCSGL 262 (268)
T ss_dssp TTTCCTT
T ss_pred hccccch
Confidence 9987653
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=4.1e-82 Score=556.92 Aligned_cols=215 Identities=21% Similarity=0.279 Sum_probs=198.3
Q ss_pred chhhHH---HHHHHHHHhCCHHHHHHHHHHHHhhhc----CCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhh
Q 024897 6 PREENV---YMAKLAEQAERYEEMVQYMEKVVASAS----TGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEES 78 (261)
Q Consensus 6 ~r~~li---~~Aklaeq~eRy~Dm~~~mk~~i~~~~----~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~ 78 (261)
+|++++ |+||||+||||||||+++||+++ + .+++||.||||||||||||+||+||+|||+|+++||++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~---~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke-- 76 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLI---YLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ-- 76 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--
Confidence 589999 99999999999999999999999 5 68999999999999999999999999999999999998
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHH
Q 024897 79 RGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAY 158 (261)
Q Consensus 79 ~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 158 (261)
+|++.+++.+++||++|++||..+|++|+++||++|||.+ |++|||+|||||||||+|||..|+ +++|++||
T Consensus 77 k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY 148 (227)
T 2o8p_A 77 LNNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIH 148 (227)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHH
Confidence 6788899999999999999999999999999999999998 999999999999999999999998 88999999
Q ss_pred HHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhccCCCCchHHHHHHHHHHHhhHh
Q 024897 159 KSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA---ISELDTLGEDSYKDSTLIMQLLRDNLT 235 (261)
Q Consensus 159 ~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A---i~~ld~l~ee~y~ds~~ilqLLrDNl~ 235 (261)
++|+++|+++||||||||||||||||||||||+|+|++||.+|++||+.+ +..-++. +.+.++|+|+|+|||||.
T Consensus 149 ~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 149 QDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 99999999899999999999999999999999999999999999999976 3333322 348889999999999984
No 9
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.47 E-value=0.57 Score=44.80 Aligned_cols=100 Identities=9% Similarity=0.057 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchh
Q 024897 97 AELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIR 176 (261)
Q Consensus 97 ~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 176 (261)
+|-..+|...+.+-...|=|...+ .+=-+...|..|+..-. -+.|...|++|+++-...|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~---~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLY---VLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 455677778888777766554311 11122223433332211 14689999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 177 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 177 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+....|.++.|+. .|+.++|..+.++|+.---.
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999988887 69999999999998875544
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.44 E-value=2.8 Score=34.55 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++|+.++....++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 170 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 170 EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57899999999999887788889888888888777766 79999999999999876543
No 11
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.07 E-value=1.5 Score=41.01 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCc
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDS 219 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~ 219 (261)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++---.. +.+++
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~~---lG~~H 409 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRVT---HGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTTS
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHh---cCCCC
Confidence 56899999999999989999999999999999988877 799999999998888755443 45554
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=92.91 E-value=2.5 Score=32.58 Aligned_cols=160 Identities=13% Similarity=0.127 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHH--
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVS-- 86 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~-- 86 (261)
-+..++.+..+-|+|++.+.+.++++ +.+|. +.+=...+..+|-. .+....+...+....... .+....-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al---~~~p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~---~~~~~~~~~ 78 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVL---KADPN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLD---TTSAEAYYI 78 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH---HHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC---CCCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcC---chhHHHHHH
Confidence 45668899999999999999999999 45554 34555556666543 344444544443322211 1111110
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024897 87 VIKEYRS-KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIA 165 (261)
Q Consensus 87 ~i~~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (261)
...-+.. .-.++-...+...+.+ -|.. .. .+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~-----~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~- 136 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIAL-----NTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI- 136 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----Cccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh-
Confidence 0000000 0011112222222221 2221 11 222335444321 21 25688899998864
Q ss_pred HhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 166 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 166 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ----KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 44554 344555555554 8999999988777654
No 13
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.47 E-value=1 Score=42.39 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchh
Q 024897 97 AELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIR 176 (261)
Q Consensus 97 ~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 176 (261)
+|...+|...+.+-.+.|=|...+ .+=-+.--|.-|+.. | . -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-D----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-C----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 456677778888777776555321 111112223333221 1 1 24689999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 177 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 177 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
.....|.++-|+. .|+.++|..+-++|++--..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 9999999888776 79999999999888875544
No 14
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.42 E-value=3.6 Score=33.13 Aligned_cols=58 Identities=22% Similarity=0.242 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++|+.++....++.+|.......|.+..++. +|+.++|+...++++..+-.
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57899999999999888888899888888888877776 69999999999999876543
No 15
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=91.91 E-value=1.2 Score=36.15 Aligned_cols=56 Identities=14% Similarity=0.114 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+.++.....|.||.......|.+..++. +|+.++|+...+++++..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 57899999999999888888899988888888887775 799999999999998864
No 16
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.43 E-value=6.2 Score=32.01 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 153 NTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.|...|++|+++....-.+.++.......+.+.+| ...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 47889999999886432222222223344445444 458999999988777764
No 17
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.07 E-value=1.6 Score=40.95 Aligned_cols=59 Identities=7% Similarity=0.025 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 211 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 211 (261)
+.|...|++|+++..+.|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--...
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 46788999999999889999999999988888877766 799999999999998755443
No 18
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.81 E-value=4.9 Score=35.15 Aligned_cols=146 Identities=14% Similarity=0.151 Sum_probs=77.8
Q ss_pred HHHHHHHHHhhhhhhh-hHHHHHHHHHhhhhhhcCcchhHH---HHHHHHHHHHHHHHHHHH-----------HHHHHhh
Q 024897 47 ERNLLSVAYKNVIGAR-RASWRIVSSIEQKEESRGNQDHVS---VIKEYRSKIEAELTEICG-----------GILKLLD 111 (261)
Q Consensus 47 ERnLlSvayKn~i~~~-R~s~R~l~~ieqke~~~~~~~~~~---~i~~yr~kie~EL~~~C~-----------eii~lId 111 (261)
-.++|...|+.+.... -.|-..+..+++....-..+..+- .+-.+|..+..+=..... +.++-|+
T Consensus 12 v~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~ 91 (383)
T 3ulq_A 12 IGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEID 91 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHH
Confidence 3667777777666553 445555555554432211111111 122334333333222333 4444443
Q ss_pred hcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHh-hhHHHHHHHH
Q 024897 112 QKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLA-LNFSVFYYEI 190 (261)
Q Consensus 112 ~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLa-LN~SVF~yEi 190 (261)
. .|...+.-...+|+-.+|.+|... |+ -+.|...|++|+.++.. + | +|...+.+ .+.+..|+.
T Consensus 92 ~--~~~~~~~~l~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~~- 155 (383)
T 3ulq_A 92 K--KQARLTGLLEYYFNFFRGMYELDQ-----RE-----YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYYY- 155 (383)
T ss_dssp H--HTHHHHHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHHH-
T ss_pred h--cCCCchhHHHHHHHHHHHHHHHHh-----cC-----HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHHH-
Confidence 3 122222234456666777776533 21 25689999999988764 3 2 34444444 444555554
Q ss_pred hCChHHHHHHHHHHHHHH
Q 024897 191 LNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 191 ~~~~~~A~~iAk~afd~A 208 (261)
+|+.++|+...++|++-+
T Consensus 156 ~~~~~~A~~~~~~al~~~ 173 (383)
T 3ulq_A 156 MKQTYFSMDYARQAYEIY 173 (383)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 899999999988887754
No 19
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=89.66 E-value=8.5 Score=32.47 Aligned_cols=57 Identities=9% Similarity=0.117 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++|++++.. ++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 172 ~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 172 KKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 5799999999999864 666777777788999988887 79999999999999886644
No 20
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.33 E-value=1.9 Score=41.18 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 211 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 211 (261)
+.|...|++|+++....|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 35778899999999889999999999999999888776 799999999999998765443
No 21
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=89.03 E-value=9.5 Score=32.16 Aligned_cols=73 Identities=7% Similarity=0.063 Sum_probs=49.8
Q ss_pred HHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHH
Q 024897 124 KVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 203 (261)
Q Consensus 124 kVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~ 203 (261)
.+..+...|..|...-. -+.|...|++|+++++. .+....+...+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34444556776654321 25689999999999864 443222233566777777665 7999999999999
Q ss_pred HHHHH
Q 024897 204 AFDEA 208 (261)
Q Consensus 204 afd~A 208 (261)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98766
No 22
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=88.49 E-value=3.7 Score=36.07 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=50.4
Q ss_pred chHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHH
Q 024897 122 DSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 201 (261)
Q Consensus 122 eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iA 201 (261)
....+|+-.+|.++... |+ -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|++++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQ-----KE-----YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-----CC-----HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 34555666778776533 22 25689999999988764 33 234444455555666665 79999999999
Q ss_pred HHHHHHHH
Q 024897 202 KQAFDEAI 209 (261)
Q Consensus 202 k~afd~Ai 209 (261)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877553
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=86.70 E-value=11 Score=30.09 Aligned_cols=60 Identities=10% Similarity=-0.013 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
-+.+..++.+.-+.|+|++.+.++.+++ ..++.-+..-...+..+|-. .+....|...+.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 66 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYL---KLTNNQDSVTAYNCGVCADN-IKKYKEAADYFD 66 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHH---hccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHH
Confidence 4678889999999999999999999998 45553344444445555543 345555665554
No 24
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.28 E-value=2.1 Score=32.01 Aligned_cols=48 Identities=17% Similarity=0.283 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+++ .|.+| ....|.++.|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 5799999999865 45554 345677777776 799999999888887643
No 25
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=85.84 E-value=0.82 Score=42.78 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++++++..+.|+|.||..+...-|.+.-|.. .|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677788888777778999999999999998877765 79999999999998775544
No 26
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=85.49 E-value=19 Score=31.87 Aligned_cols=49 Identities=14% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+++ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999853 444555556677888887777899999987666554
No 27
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=85.38 E-value=14 Score=30.38 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+.+. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 56888999988652 3443 23344455544 4799999988766654
No 28
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=84.95 E-value=21 Score=31.95 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 35678888888754 44555 34455555555 4799999999888777644
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=84.38 E-value=18 Score=30.60 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=37.5
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS 71 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ 71 (261)
-.-+..++.+....|+|++.+.++++++. .+|. +.+-...+..+|-. .+....+...+..
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~---~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCLE---LKPD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHh---cCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34556778888888888888888888873 4443 34455555555543 3445555555543
No 30
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=83.11 E-value=22 Score=30.69 Aligned_cols=190 Identities=15% Similarity=0.070 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVE----ERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQD 83 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 83 (261)
..+..++....+.|+|++.+.++.+++. ..+. +.. =...+..+|-. .+....+...+....+.-...++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~---~~~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ---AGTE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCCS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH---hccc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 4566788888899999999999999984 4443 222 22334444432 3444455554432211111111110
Q ss_pred hH-----HHHHHH-HHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhh------c-CchhHHHH
Q 024897 84 HV-----SVIKEY-RSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEF------K-TGDERKVA 150 (261)
Q Consensus 84 ~~-----~~i~~y-r~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~------~-~~~~~~~~ 150 (261)
.. .+..-| ...=-++-...+...+.+.... .+....+..+...|..|...-.. . ..++-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 000001 0111123344444555543321 11222333344455555544330 0 01122334
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
.+.|...|++|++++... +.+|.......|.+..++ -.|+.++|+...++++.-.-.
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 678899999999888653 223444444455555544 489999999988888765543
No 31
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=81.10 E-value=29 Score=30.69 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----chhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAEL--APTH----PIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4578888888887443334 4444 5555556666666555 7999999998887765
No 32
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=81.03 E-value=2.4 Score=32.35 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHhcC---CCC-------CchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAEL---APT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L---~pt-------~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 568999999998865321 233 56777888888887776 7999999998888754
No 33
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.55 E-value=26 Score=29.79 Aligned_cols=189 Identities=14% Similarity=0.043 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVE----ERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQD 83 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 83 (261)
..+..++...-..|+|++.+.++.+++. .++. +.. =...+..+|-. .+....+...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~---~~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQ---VGTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh---cCcc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 3556788888899999999999999984 4443 222 22334444432 2334444444432111111111111
Q ss_pred hH-----HHHHHHH-HHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhh-------c---CchhH
Q 024897 84 HV-----SVIKEYR-SKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEF-------K---TGDER 147 (261)
Q Consensus 84 ~~-----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~-------~---~~~~~ 147 (261)
.. .+..-|. ..=-++-...+...+.+.... .+....+..+-..|..|...-.. . ..++-
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 00 0000110 111223344445555544332 12222333334445555444331 0 01223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024897 148 KVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (261)
Q Consensus 148 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 209 (261)
....+.|...|++|+.++.. + +.+|.......|.+..++ -+|+.++|+...++|+.-+-
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 34467889999999988865 3 234444444555555555 47999999998888876543
No 34
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=79.90 E-value=23 Score=28.80 Aligned_cols=190 Identities=14% Similarity=0.035 Sum_probs=97.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVE----ERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQD 83 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 83 (261)
..+...+...-..|+|++.+.++.+++. ..+. +.+ =...+..+|-. .+....+...+..........++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~---~~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ---VGTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh---hCcc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 4677788999999999999999999984 3333 222 12233333322 2333444444432111111111111
Q ss_pred hH-----HHHHHH-HHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhc----------CchhH
Q 024897 84 HV-----SVIKEY-RSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFK----------TGDER 147 (261)
Q Consensus 84 ~~-----~~i~~y-r~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~----------~~~~~ 147 (261)
.. .+..-| ...--++-...+...+.+... ..+....+..+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 00 000011 111122334444455554433 2222334445556677776655511 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 148 KVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 148 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
....+.|...|++|+.++.. .+ .+|.......+.+..++ -.|+.++|+...++++.-+-.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTA-LG-DRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HT-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cC-CHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHh
Confidence 33467788888888888764 22 23433334444444444 479999999988888765433
No 35
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=79.45 E-value=25 Score=29.92 Aligned_cols=59 Identities=10% Similarity=0.201 Sum_probs=36.3
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
-.-+..++.+..+.|+|++.+.++.+++. .+|. +..-...+..+|.. .+....+...+.
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~---~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE---LQPN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh---cCCC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 34566778888888888888888888873 3433 34445556665543 344444444443
No 36
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=77.98 E-value=6.6 Score=29.19 Aligned_cols=46 Identities=17% Similarity=0.147 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899988854 34444 445566666665 7999998887777654
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=76.71 E-value=34 Score=29.03 Aligned_cols=58 Identities=9% Similarity=0.058 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
..++.+|...-+.|+|++.+.++++++. .+|. +.+-...+..+|-. .+....+...+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~---~~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~ 123 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL---QDPG-DAEAWQFLGITQAE-NENEQAAIVALQ 123 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH---hCcC-CHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 4588899999999999999999999983 4443 35555666666543 344555555554
No 38
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=75.92 E-value=19 Score=25.72 Aligned_cols=56 Identities=16% Similarity=0.165 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++|+.++.. .+ .+|.......|.+..++. .|+.++|+...+++++-+-.
T Consensus 66 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 5689999999998864 22 233344445556655554 79999999999888876543
No 39
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=75.84 E-value=48 Score=30.34 Aligned_cols=173 Identities=17% Similarity=0.117 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHhCCH-HHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHH
Q 024897 8 EENVYMAKLAEQAERY-EEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVS 86 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~ 86 (261)
.-+..++++....|+| ++.+.++++++ ..+|. ..+=...|..+|-.. +....|...+......... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al---~~~p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAV---KLEPE-LVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHH---HHCTT-CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHH---hhCCC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 3455666666677777 77777777776 33333 344455555555432 3444444444322111100 001111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHH
Q 024897 87 VIKEYRS----------KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLN 156 (261)
Q Consensus 87 ~i~~yr~----------kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 156 (261)
+..-|.. .=-++-...+...+.+ -|.. ..+ +-..|..|... -|..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~-~~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSL-YFNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHH-HHHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHH-HHhhcc-ccchHHHHHH
Confidence 1111111 1122334444455543 2321 222 23345555433 112222 1223568999
Q ss_pred HHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 157 AYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 157 aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 23222555667777777766 7999999888777754
No 40
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=74.78 E-value=40 Score=28.95 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVVA 35 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 35 (261)
-+..++.+....|+|++.+.++++.+.
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLT 114 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355788888889999999999998874
No 41
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=74.74 E-value=31 Score=27.61 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIV 69 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l 69 (261)
+-+..++.+.-+.|+|++.+..+.+++ ..+|. +.+=...+..+|-. .+....+...+
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al---~~~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~ 62 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERAL---KENPQ-DPEALYWLARTQLK-LGLVNPALENG 62 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---TTSSS-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCC-CHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 345566677777777777777777776 34443 34444444444432 33344444444
No 42
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.70 E-value=42 Score=29.15 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
++|...|++|..++.. .+ ..|.-.|...+.+.-+|...++..+|+..-.++|...-.
T Consensus 192 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 192 AKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 5689999999998864 43 233444666666666777789999999988888876543
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=74.17 E-value=9.8 Score=28.09 Aligned_cols=52 Identities=6% Similarity=0.010 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+++... .++.++.+-....|.+..+ .-+|+.++|+..-++|+
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 5689999999998753 5554554333444555554 45899999998655554
No 44
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=73.93 E-value=10 Score=26.39 Aligned_cols=53 Identities=6% Similarity=0.013 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+... .++.+|.......+.+..++. +|+.++|....++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5688999999988753 455555555566677766665 7999999887766665
No 45
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=73.72 E-value=7.2 Score=34.68 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~-L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|.+.|++|+++.... ....||-.+...-|.+.-|+. +|+.++|...-+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 56999999999998653 345677777777788877776 799999977666554
No 46
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=73.57 E-value=35 Score=27.66 Aligned_cols=55 Identities=16% Similarity=-0.041 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 209 (261)
+.|...|++|+.++... .+|...+.+++.-...|...|+.++|+...+++++-+-
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 46888899998887642 23444444444444455557999999988888876543
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=73.10 E-value=55 Score=29.76 Aligned_cols=46 Identities=9% Similarity=0.178 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++++++ .|.+| ....+.+.. |...|+.++|....+++++
T Consensus 533 ~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 533 DAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 5688888888765 35555 233333333 4458999999988877765
No 48
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=72.50 E-value=40 Score=27.83 Aligned_cols=46 Identities=13% Similarity=0.091 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 5688888888764 34444 34555655554 48999999887777664
No 49
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=72.09 E-value=44 Score=28.24 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024897 10 NVYMAKLAEQAERYEEMVQYMEKVVA 35 (261)
Q Consensus 10 li~~Aklaeq~eRy~Dm~~~mk~~i~ 35 (261)
+..++.+....|+|++.+.++.+.+.
T Consensus 50 ~~~l~~~~~~~g~~~~A~~~~~~al~ 75 (406)
T 3sf4_A 50 YSQLGNAYFYLHDYAKALEYHHHDLT 75 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 45788888889999999999998774
No 50
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=71.77 E-value=34 Score=26.72 Aligned_cols=59 Identities=8% Similarity=0.082 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
-.-+..+|.+..+.|+|++.+.++++++. ..+. +..-...+..+|-. .+....+...+.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~---~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 115 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALE---LDSS-AATAYYGAGNVYVV-KEMYKEAKDMFE 115 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---cCCc-chHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 34456677888888888888888888773 3333 33334444444432 334444555544
No 51
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=71.46 E-value=21 Score=27.94 Aligned_cols=89 Identities=19% Similarity=0.139 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH--Hhh--hhhhcCcchhHHHHHHHHHHHH
Q 024897 21 ERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS--IEQ--KEESRGNQDHVSVIKEYRSKIE 96 (261)
Q Consensus 21 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~--ieq--ke~~~~~~~~~~~i~~yr~kie 96 (261)
+|.|..++++|.-+--+..|++||.|-|.=|.--.|...-.-|-|.|-+.. ... +....+ .+-++-....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 577788888876552234699999999999999888888888888887732 111 111111 11134445566
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 024897 97 AELTEICGGILKLLDQKL 114 (261)
Q Consensus 97 ~EL~~~C~eii~lId~~L 114 (261)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666554
No 52
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=70.85 E-value=14 Score=25.30 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899999864 44454 344566666655 799999988776665
No 53
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=70.67 E-value=36 Score=26.64 Aligned_cols=48 Identities=8% Similarity=0.006 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+.+ .|.+| ...++.+..++ -+|+.++|+...++++.-.
T Consensus 190 ~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 190 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQI-AVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHHhC
Confidence 5688888888764 34443 33445555544 4799999999888887654
No 54
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=70.60 E-value=31 Score=28.87 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHH-hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGL-ALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL-aLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+.+.. +..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 568999999997532 2233333333 4455655555 899999999999888644
No 55
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=70.48 E-value=15 Score=28.16 Aligned_cols=73 Identities=10% Similarity=0.015 Sum_probs=47.1
Q ss_pred HHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHH
Q 024897 124 KVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 203 (261)
Q Consensus 124 kVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~ 203 (261)
.+..+-..|..|...-. .+.|...|++|+.++.. .+. +|...+.+++.-...|--+|++++|....++
T Consensus 65 ~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGN----------WDAARRCFLEERELLAS-LPE-DPLAASANAYEVATVALHFGDLAGARQEYEK 132 (203)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCC-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHH-cCc-cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34444455666554322 25689999999999873 442 4544555444444444458999999999998
Q ss_pred HHHHH
Q 024897 204 AFDEA 208 (261)
Q Consensus 204 afd~A 208 (261)
|+.-+
T Consensus 133 al~~~ 137 (203)
T 3gw4_A 133 SLVYA 137 (203)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 56
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=70.07 E-value=54 Score=28.44 Aligned_cols=46 Identities=13% Similarity=0.099 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 312 ~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 312 VEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 5678888888754 34444 33444444444 58999999988887764
No 57
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=69.27 E-value=15 Score=31.54 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46888899999888754444456655556667766665 58888888888777654
No 58
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=69.09 E-value=57 Score=28.29 Aligned_cols=173 Identities=14% Similarity=0.111 Sum_probs=82.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCc-chhHHHHH
Q 024897 11 VYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGN-QDHVSVIK 89 (261)
Q Consensus 11 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~-~~~~~~i~ 89 (261)
..+|.+..+.|+|++.+.++.+++. ..| -+..-...+..+|-. .+....+...+........ .+ .....+..
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~---~~~-~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~ 219 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE---VCV-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKIST 219 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH---HCT-TCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH---hCC-CChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHH
Confidence 3457778889999999999999983 333 344555566665543 3455556666554332211 11 01111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhh--hhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 024897 90 EYRS-KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYL--AEFKTGDERKVAAENTLNAYKSAQDIAN 166 (261)
Q Consensus 90 ~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYl--aE~~~~~~~~~~~~~a~~aY~~A~~~a~ 166 (261)
-|.. .=-++-...+..++.+ -|.. ......+ ...+..-.++ +.... +..-.+.|...|++|+.
T Consensus 220 ~~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~-~~~~~~~~~~~~~~~~~---~~g~~~~A~~~~~~~l~--- 285 (450)
T 2y4t_A 220 LYYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHY-KQVKKLNKLIESAEELI---RDGRYTDATSKYESVMK--- 285 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHH-HHHHHHHHHHHHHHHHH---HHTCHHHHHHHHHHHHH---
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHH-HHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHh---
Confidence 1111 1112222223333321 2221 1111111 1111110000 11100 01113568888888875
Q ss_pred hcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 167 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|.+|....-+++.-+..|.-+|+.++|+...++++.
T Consensus 286 --~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 286 --TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp --HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred --cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34667765444443334445558999999998888764
No 59
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=68.98 E-value=19 Score=23.61 Aligned_cols=46 Identities=20% Similarity=0.400 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 4688899998864 34443 344566665554 7999999887777665
No 60
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=68.40 E-value=19 Score=30.17 Aligned_cols=188 Identities=14% Similarity=0.053 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHH-----hhhhhhhhHHHHHHHH-HhhhhhhcCcc
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAY-----KNVIGARRASWRIVSS-IEQKEESRGNQ 82 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvay-----Kn~i~~~R~s~R~l~~-ieqke~~~~~~ 82 (261)
.+...+...-..|+|++++.+.++.+. ..+. ..+....+..-| -...+..-.|...+.. ++.... ..+.
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~ 151 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELK---KEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDV 151 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH---TCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhc---cccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCch
Confidence 344566666677999999999998883 3343 333322221111 1111233344444432 211111 0111
Q ss_pred hh-H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHH
Q 024897 83 DH-V----SVIKEYR-SKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLN 156 (261)
Q Consensus 83 ~~-~----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 156 (261)
.. . .+..-|. ..=-++-....+..+.+.+. .|. +....+..+-..|..|..+ |+ -+.|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~-----~~-----y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLD-----SR-----YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHT-----TC-----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHH-----hh-----HHHHHH
Confidence 10 0 1111111 11123444555566655443 222 1111112222335554322 21 257999
Q ss_pred HHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchH
Q 024897 157 AYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYK 221 (261)
Q Consensus 157 aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ 221 (261)
.|++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...++
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhH
Confidence 99999999853 23444556555544455556899999942 2344444444445555553
No 61
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=67.96 E-value=17 Score=25.88 Aligned_cols=47 Identities=15% Similarity=0.276 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.+ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688899998864 4445 3455667766665 79999999988888764
No 62
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=66.87 E-value=25 Score=24.69 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLR 231 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLr 231 (261)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+..-++++... -+......+...+..|+
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY------PGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHH
Confidence 568888888875 346777655566666666664 799999988766655432 11222344555555555
Q ss_pred hhH
Q 024897 232 DNL 234 (261)
Q Consensus 232 DNl 234 (261)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 63
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=66.17 E-value=21 Score=23.94 Aligned_cols=46 Identities=13% Similarity=0.231 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.++ ....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4688888888864 23333 345666666665 7999999887777654
No 64
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.10 E-value=15 Score=26.35 Aligned_cols=49 Identities=27% Similarity=0.217 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 346666666653 345555555555666655554 5777777776666554
No 65
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=66.03 E-value=36 Score=25.53 Aligned_cols=47 Identities=9% Similarity=0.095 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.-
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4577777777654 34443 344555555554 78888888776666653
No 66
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=65.99 E-value=69 Score=28.12 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
.+.|...|++|+.+ .|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 431 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 431 FIEATNLLEKASKL-----DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 35688888888764 34444 33344444444 479999999887777653
No 67
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=65.73 E-value=48 Score=26.17 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS 71 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ 71 (261)
-+..+|.+..+.|+|++.+.++++++. .++. +.+-...+..+|-. .+....+...+..
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~---~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 96 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALE---IDPS-SADAHAALAVVFQT-EMEPKLADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHh---cCCC-hHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 356778888889999999999999883 3433 34444555555543 3445555555543
No 68
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=64.51 E-value=42 Score=25.06 Aligned_cols=70 Identities=7% Similarity=-0.098 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLR 231 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLr 231 (261)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4678888888765 45554 344455555554 79999998876666543 2222223444555555
Q ss_pred hhHhhhh
Q 024897 232 DNLTLWT 238 (261)
Q Consensus 232 DNl~lW~ 238 (261)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5554443
No 69
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=63.99 E-value=60 Score=26.68 Aligned_cols=168 Identities=13% Similarity=0.124 Sum_probs=85.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHHHHHH
Q 024897 11 VYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKE 90 (261)
Q Consensus 11 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~ 90 (261)
..+|.+....|+|++.+.++.+++. .+| -+.+-...+..+|-. .+....+...+.......... ......+..-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~---~~~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE---VCV-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH---HCT-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH---hCC-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3447888899999999999999983 333 345555566665544 355566666665433221100 0111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhh--------cchhhhhhhhcCchhHHHHHHHHHHHHHHH
Q 024897 91 YRS-KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMK--------GDYHRYLAEFKTGDERKVAAENTLNAYKSA 161 (261)
Q Consensus 91 yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 161 (261)
|.. .=.++-...+..++.+ -|. ......+|.++. |..+. ..|+ .+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~-----~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDGR-----YTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTTC-----HHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcCC-----HHHHHHHHHHH
Confidence 111 1112222233333321 122 122222332221 22211 1121 35688888888
Q ss_pred HHHHHhcCCCCCchhH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 162 QDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 162 ~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.. .|.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 34565443 344555655554 89999999988887763
No 70
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=63.91 E-value=26 Score=23.64 Aligned_cols=47 Identities=21% Similarity=0.174 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++ .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888888753 4455421 45566666665 7999999887776664
No 71
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=63.19 E-value=73 Score=27.40 Aligned_cols=176 Identities=10% Similarity=0.020 Sum_probs=87.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCC-----HHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCc-chhH
Q 024897 12 YMAKLAEQAERYEEMVQYMEKVVASASTGEELT-----VEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGN-QDHV 85 (261)
Q Consensus 12 ~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls-----~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~-~~~~ 85 (261)
+++.+.-..|+|++.+.+.++.+. .-.... .+=...+..+|-. .+..-.|...+.....--...++ ....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~---~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAES---KLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT---TGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH---HHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 378888889999999999999883 211112 1223334444433 23333343333211111010111 0000
Q ss_pred HHH-----HHHH-HHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHH
Q 024897 86 SVI-----KEYR-SKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYK 159 (261)
Q Consensus 86 ~~i-----~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 159 (261)
..+ .-|. ..=-++-...+...+.+.... .+.......+...|..|..+ |+ -+.|...|+
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~-----g~-----~~~A~~~~~ 248 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQ-----SQ-----YEDAIPYFK 248 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHC-----CC-----HHHHHHHHH
Confidence 000 0000 011122333344444443321 12222223333345555432 21 357999999
Q ss_pred HHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024897 160 SAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (261)
Q Consensus 160 ~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 209 (261)
+|++++...-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 249 ~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 249 RAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99999875322 14444445556655554 7999999999988887653
No 72
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=62.99 E-value=89 Score=28.32 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
.+.|...|++++++... . +.+|-....+++.-...|-..|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 35789999999987653 2 3456543333333344445589999999988888754
No 73
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=61.07 E-value=27 Score=24.76 Aligned_cols=45 Identities=22% Similarity=0.137 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 153 NTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 22 ~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 22 NAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 455566665543 23332 233344444333 5666666655555543
No 74
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=60.51 E-value=20 Score=25.24 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...++++.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457777777764 356788655566666666665 7999999988877765
No 75
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=60.41 E-value=92 Score=27.63 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHh--cCCCCCch---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 153 NTLNAYKSAQDIANA--ELAPTHPI---RLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 153 ~a~~aY~~A~~~a~~--~L~pt~pi---rLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555554433 45566653 2455555555566668999999988888765
No 76
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=60.11 E-value=1.4e+02 Score=29.55 Aligned_cols=168 Identities=13% Similarity=0.137 Sum_probs=85.8
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhhhhhhcCcchhHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS-IEQKEESRGNQDHVS 86 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~-ieqke~~~~~~~~~~ 86 (261)
+-+..++.+..+.|+|++.+.+.++.+ +.+|+. .+=.+-|..+|... +..-.|...+.. ++-.... -.....
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl---~l~P~~-~~a~~nLg~~l~~~-g~~~eA~~~~~~Al~l~P~~--~~a~~n 82 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKAL---EVFPEF-AAAHSNLASVLQQQ-GKLQEALMHYKEAIRISPTF--ADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---HHCSCC-HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTC--HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC--HHHHHH
Confidence 556788999999999999999999999 456654 34455556666542 334444443321 1111100 001111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024897 87 VIKEYRS-KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIA 165 (261)
Q Consensus 87 ~i~~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (261)
+-.-|.. .=-++-...++..+.+ -|.. ..++ ...|..|+-+ |. .+.|..+|++|+++
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l-----~P~~----~~a~--~~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l- 140 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQI-----NPAF----ADAH--SNLASIHKDS-----GN-----IPEAIASYRTALKL- 140 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111111 0011122222333332 1221 1121 1224333321 11 35689999999864
Q ss_pred HhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024897 166 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 212 (261)
Q Consensus 166 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 212 (261)
.|.+|- ...|.+. .|..+|+.++|++..+++..-.-..+
T Consensus 141 ----~P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ----KPDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ----CSCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ----CCCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 455543 3344443 34457999999888888877655444
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=59.90 E-value=28 Score=25.57 Aligned_cols=46 Identities=7% Similarity=0.044 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688899999864 45554 344555555554 7999999876666554
No 78
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=59.74 E-value=29 Score=27.98 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLG-----LALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLg-----LaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|..+|++|+++.-. .|+..++.+. +-.|-+.-+.. +|+.++|+..+.+|+.
T Consensus 28 eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 28 DEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5699999999988653 3332333333 66666666555 7999999988777765
No 79
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=59.38 E-value=55 Score=35.95 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=19.8
Q ss_pred HHHHHHHHhCChHHHHHHHHHHH
Q 024897 183 FSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 183 ~SVF~yEi~~~~~~A~~iAk~af 205 (261)
-.|-+|+-.|..++|+.+..+|+
T Consensus 1285 eli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1285 ELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHh
Confidence 45678899999999999999883
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=59.22 E-value=65 Score=25.53 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 153 NTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.|...|++++..... ..|......++.+..++. +|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 455555555433221 122223445555555554 7999999887777653
No 81
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=59.15 E-value=71 Score=25.97 Aligned_cols=55 Identities=15% Similarity=-0.028 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC-chhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTH-PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.+....-.+.+ |-......+.+..++ .+|+.++|+...++++..
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 5689999999988754333222 333344555665554 479999999888887653
No 82
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=58.87 E-value=32 Score=23.84 Aligned_cols=47 Identities=13% Similarity=0.108 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 4678888888864 33443 344556655554 79999998887776653
No 83
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=58.39 E-value=81 Score=26.34 Aligned_cols=58 Identities=10% Similarity=0.013 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
..+..++.+.-+.|+|++.+.++.+++ ..+|. +..-...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al---~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAV---QQDPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHH---HSCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH---HhCCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457889999999999999999999998 44444 44555556655543 244444444443
No 84
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=58.13 E-value=46 Score=23.50 Aligned_cols=54 Identities=17% Similarity=0.157 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+.++.. .. .+|.......+.+..++ -.|+.++|+...++|+.-+
T Consensus 106 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 106 EKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAYT-ALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Confidence 5688999999998864 22 23333344445555544 5799999999888877654
No 85
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=57.82 E-value=33 Score=24.32 Aligned_cols=17 Identities=24% Similarity=0.255 Sum_probs=8.7
Q ss_pred hCChHHHHHHHHHHHHH
Q 024897 191 LNSPDRACNLAKQAFDE 207 (261)
Q Consensus 191 ~~~~~~A~~iAk~afd~ 207 (261)
+|+.++|+...++++..
T Consensus 90 ~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 90 MESYDEAIANLQRAYSL 106 (137)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 45555555555554443
No 86
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=57.63 E-value=14 Score=26.45 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 357788888875 334467777777888877776 79999999988887653
No 87
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=57.47 E-value=36 Score=23.34 Aligned_cols=49 Identities=20% Similarity=0.405 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 209 (261)
+.|...|++|+.. .|.+| .+..+.+..++. .|+.++|+....+++...-
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 5688888888864 23443 344566666555 7999999999888877553
No 88
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=57.25 E-value=77 Score=25.73 Aligned_cols=26 Identities=12% Similarity=-0.027 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
.++.+|...-+.|+|++.+.++++++
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~ 48 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVC 48 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34455555555566666655555555
No 89
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=57.08 E-value=62 Score=24.59 Aligned_cols=166 Identities=9% Similarity=-0.014 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSV 87 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~ 87 (261)
.-+..++.+.-..|+|++.+.++++++. ..+. +.+-...+..+|-. .+....+...+....+..... ......+
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~---~~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK---SDPK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH---hCcc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHH
Confidence 3456778888899999999999999883 3443 34445555555542 344555555554332211100 0011111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024897 88 IKEYRSK--IEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIA 165 (261)
Q Consensus 88 i~~yr~k--ie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (261)
..-|... =-+ +.+..++..+- ....+. ....+...|..|... |+ .+.|...|++++..
T Consensus 83 ~~~~~~~~~~~~-------~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 83 GWFLCGRLNRPA-------ESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA- 142 (225)
T ss_dssp HHHHHTTTCCHH-------HHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCcHH-------HHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111110 011 22222222221 111111 122223445544321 21 24678888888754
Q ss_pred HhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 166 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 166 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 ----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 ----QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp ----STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred ----CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 33443 23344444444 479999999888877653
No 90
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=56.69 E-value=89 Score=26.29 Aligned_cols=51 Identities=6% Similarity=0.004 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 172 ~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5789999999998864 222 22 333233333445555799999988766654
No 91
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=56.50 E-value=36 Score=24.05 Aligned_cols=48 Identities=8% Similarity=0.012 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4688899999864 34443 344555555554 799999998888877654
No 92
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=55.92 E-value=69 Score=24.80 Aligned_cols=58 Identities=7% Similarity=0.023 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS 71 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ 71 (261)
.+..+|...-+.|+|++.+.++++++ ..++. +.+-...+..+|- ..+....+...+..
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l---~~~~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~ 82 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAI---EENKE-DAIPYINFANLLS-SVNELERALAFYDK 82 (243)
T ss_dssp -----------------CCTTHHHHH---TTCTT-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH---HhCcc-cHHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 45677888888999999999999998 34443 3454555555553 24555566666543
No 93
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=55.86 E-value=33 Score=25.94 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+.+..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5688899988864 45554 233344444443 6888888877776643
No 94
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=54.45 E-value=85 Score=25.43 Aligned_cols=59 Identities=8% Similarity=0.006 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS 71 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ 71 (261)
.-+..++.+..+.|+|++.+.++.+++. .+|. +.+-...+..+|- ..+....+.+.+..
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~---~~~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~ 114 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARM---LDPK-DIAVHAALAVSHT-NEHNANAALASLRA 114 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh---cCcC-CHHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 4456677888888888888888888773 3333 3444455555553 23445555555543
No 95
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=54.10 E-value=84 Score=25.25 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024897 10 NVYMAKLAEQAERYEEMVQYMEKVVA 35 (261)
Q Consensus 10 li~~Aklaeq~eRy~Dm~~~mk~~i~ 35 (261)
+..++.+....|+|++.+.++++.+.
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45788888889999999999999884
No 96
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=53.90 E-value=38 Score=22.72 Aligned_cols=46 Identities=11% Similarity=0.017 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 4678888888764 34444 34456665554 47999999887666543
No 97
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=53.38 E-value=38 Score=28.43 Aligned_cols=54 Identities=9% Similarity=-0.008 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5689999999998764 32 555556666555556666899999998888876543
No 98
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=53.35 E-value=63 Score=23.59 Aligned_cols=48 Identities=19% Similarity=0.115 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 466664 34566665554 799999998877776544
No 99
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=53.31 E-value=31 Score=20.08 Aligned_cols=27 Identities=30% Similarity=0.500 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024897 86 SVIKEYRSKIEAELTEICGGILKLLDQ 112 (261)
Q Consensus 86 ~~i~~yr~kie~EL~~~C~eii~lId~ 112 (261)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 567889999999999999998877643
No 100
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=53.13 E-value=25 Score=28.36 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCCchhH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANA--ELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQ 228 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~--~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilq 228 (261)
+.|..+|.+|+++-.. .+.|.++--+ .-..|-++-++ -+|+.++|+.--++|+.-. .-+...+++...+.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~-----p~d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVEMI-----EERKGETPGKERMME 147 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH-----HHCCSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHhcC-----CCcHHHHHHHHHHHH
Confidence 4688899999987322 4566554111 00123333333 3899999987665555433 123344666666666
Q ss_pred HHHhhHh
Q 024897 229 LLRDNLT 235 (261)
Q Consensus 229 LLrDNl~ 235 (261)
.+.+.+.
T Consensus 148 ~~~~~~~ 154 (159)
T 2hr2_A 148 VAIDRIA 154 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 101
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=52.87 E-value=36 Score=25.64 Aligned_cols=47 Identities=9% Similarity=0.011 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5689999999864 456663 34666666665 79999998766666543
No 102
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=52.87 E-value=79 Score=24.57 Aligned_cols=46 Identities=22% Similarity=0.130 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 156 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 156 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcccH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 5678888888764 33444 344555555554 7999999998888765
No 103
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=52.81 E-value=48 Score=22.57 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=8.1
Q ss_pred hCChHHHHHHHHHHHH
Q 024897 191 LNSPDRACNLAKQAFD 206 (261)
Q Consensus 191 ~~~~~~A~~iAk~afd 206 (261)
.|+.++|+....+++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 4555555555544443
No 104
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=52.31 E-value=50 Score=22.50 Aligned_cols=47 Identities=17% Similarity=0.098 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 4678888888764 34443 23445555554 479999999887776653
No 105
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=51.90 E-value=48 Score=25.67 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc-------------hhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHP-------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~p-------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45788888887643 3344 123456667666665 7899998888877755
No 106
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=51.54 E-value=57 Score=22.51 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLR 231 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLr 231 (261)
+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5688899998864 344443 4455555554 4899999999888887765332 12333455556666
Q ss_pred hhHhhhh
Q 024897 232 DNLTLWT 238 (261)
Q Consensus 232 DNl~lW~ 238 (261)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5544443
No 107
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.16 E-value=52 Score=21.97 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 207 (261)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 244555555554 79999999988887653
No 108
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=51.08 E-value=17 Score=32.60 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 45788888888765431 011466777777888877775 7888888888777764
No 109
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=50.86 E-value=48 Score=24.05 Aligned_cols=46 Identities=9% Similarity=-0.117 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888864 34443 344555555554 7999999988877765
No 110
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=50.44 E-value=1.2e+02 Score=25.82 Aligned_cols=108 Identities=18% Similarity=0.276 Sum_probs=64.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHHHHHHHH
Q 024897 13 MAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYR 92 (261)
Q Consensus 13 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr 92 (261)
.|+|.+....|-.||+-+|.-.. +..|-.|.-.-||=-+.. ++.+. .. ...|++-.
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~---Kd---SeKI~RNQ 155 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN---KD---QERIERNQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT---CC---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc---ch---HHHHHHhH
Confidence 57888888888888888766442 234555666666655443 22211 11 22333333
Q ss_pred H---HHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 024897 93 S---KIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANA 167 (261)
Q Consensus 93 ~---kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 167 (261)
. +.+.--..+|-|+|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 156 sKLssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 156 QKFKDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3 344455667777777555 4558888989887653 22334568888887753
No 111
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=49.08 E-value=54 Score=26.38 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=55.0
Q ss_pred cchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCc---hhHHHhhhHHHHH----HHHhCChHHHHHHHHHH
Q 024897 132 GDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQA 204 (261)
Q Consensus 132 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgLaLN~SVF~----yEi~~~~~~A~~iAk~a 204 (261)
|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+. +
T Consensus 43 G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~----~ 113 (158)
T 1zu2_A 43 GGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ----F 113 (158)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----H
T ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----H
Confidence 555555677777777777889999999999864 45555 3455555322221 011245555555 5
Q ss_pred HHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhc
Q 024897 205 FDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTS 239 (261)
Q Consensus 205 fd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~ 239 (261)
|+.|+.. +.+ +.+...-+++...+-.+|..
T Consensus 114 ~~kAl~l----~P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 114 FQQAVDE----QPD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH----CTT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHh----CCC-CHHHHHHHHHHHhCHhccCc
Confidence 6666552 221 23455556666777777653
No 112
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.04 E-value=53 Score=23.23 Aligned_cols=46 Identities=11% Similarity=-0.045 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4678888888764 34443 334555555554 7999999887776654
No 113
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=48.69 E-value=40 Score=26.00 Aligned_cols=46 Identities=11% Similarity=0.109 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|..+|++|+.+ .|.+|. ...|.++.|.. +|++++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999864 466663 34566666554 8999999876666554
No 114
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=48.54 E-value=52 Score=24.67 Aligned_cols=46 Identities=9% Similarity=0.161 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++ .|.||- ...+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 4678888888754 455542 3334444444 47888888877666654
No 115
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=48.17 E-value=1.1e+02 Score=24.66 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=45.7
Q ss_pred chhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh
Q 024897 6 PREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEEL--TVEERNLLSVAYKNVIGARRASWRIVSSIEQ 74 (261)
Q Consensus 6 ~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~L--s~eERnLlSvayKn~i~~~R~s~R~l~~ieq 74 (261)
+-+.+..+|...-+.|+|++.+..+.+++ ...|.- ..+=...+..+|-. .+....|...+..+..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l---~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVF---TYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHG---GGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHH---HhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 34678888999999999999999999998 344433 25555666666643 4666777777765444
No 116
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=47.23 E-value=1e+02 Score=24.28 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 94 ~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 94 DAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888764 34443 233444444444 7999999988888775
No 117
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=47.06 E-value=58 Score=23.55 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+ ..+..+.+..++. .|+.++|+...++++.
T Consensus 30 ~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 30 ENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688889888864 2333 3444555555554 7999999988887765
No 118
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=46.69 E-value=64 Score=21.69 Aligned_cols=46 Identities=20% Similarity=0.400 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 3466666666543 22232 223344444433 5777777766666554
No 119
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=46.42 E-value=57 Score=24.46 Aligned_cols=46 Identities=11% Similarity=0.042 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888864 34444 445566666665 7999998887766654
No 120
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=44.82 E-value=60 Score=24.93 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688899999865 24443 445666666665 7999999998888776
No 121
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=44.64 E-value=69 Score=21.50 Aligned_cols=46 Identities=20% Similarity=0.400 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|....++++.
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4678888888754 34443 334556666554 7999999887777664
No 122
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=44.60 E-value=44 Score=29.06 Aligned_cols=53 Identities=21% Similarity=0.254 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcC-------CCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAEL-------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L-------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al 223 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKAL 223 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 567888888886532110 00124455667777776665 678888877766664
No 123
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=44.29 E-value=60 Score=25.06 Aligned_cols=46 Identities=9% Similarity=-0.010 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 4688888888865 34443 345566666554 7999999887776654
No 124
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=44.21 E-value=69 Score=30.49 Aligned_cols=47 Identities=21% Similarity=0.350 Sum_probs=30.3
Q ss_pred hcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhH------HHHHHH
Q 024897 131 KGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNF------SVFYYE 189 (261)
Q Consensus 131 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~------SVF~yE 189 (261)
-||..||...+ ..|...|.+|..+.=..=. .-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~--~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQ--PYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSH--HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCc--hHHHHHHHHhcccccHHHHHHHH
Confidence 69999999764 4789999999865311111 11456665443 677774
No 125
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=43.60 E-value=45 Score=28.40 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=46.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH--Hhh--hhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSS--IEQ--KEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~--ieq--ke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|....|...-.-|-|.|-+.. ... +....+ .+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888742 111 111111 11234445677777777777777777654
No 126
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=43.56 E-value=1.2e+02 Score=23.95 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhh
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKN 57 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn 57 (261)
-+-+..++.+..+.|+|++.+.++++++ ..+|. +.+-...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al---~~~P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLV---ARTPR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCC-cHHHHHHHHHHHHH
Confidence 3456788999999999999999999999 45554 34444555555443
No 127
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.55 E-value=33 Score=24.47 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCC
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEE 42 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~ 42 (261)
.-+++++.++-+.|+|++.+.+..++. ..+|+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l---~~~p~ 75 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLL---DSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---TCCCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCC
Confidence 456788888888888888888888888 45555
No 128
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=43.21 E-value=63 Score=25.50 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=24.6
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
-+.++..+...-+.|+|++.+.++.+++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al 31 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTI 31 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4577888888889999999999999988
No 129
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=43.15 E-value=1.5e+02 Score=24.87 Aligned_cols=53 Identities=11% Similarity=0.023 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchh-HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIR-LGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pir-LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 132 ~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 5799999999998864 2 13333 3345566666665 799999998888776643
No 130
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=42.98 E-value=1.4e+02 Score=24.72 Aligned_cols=51 Identities=6% Similarity=-0.060 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++... .. +|... ....|.+.++.. +|++++|+...+++..
T Consensus 135 ~~A~~~~~~Al~~~~~-~~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 135 AKAIDCYELAGEWYAQ-DQ--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CC--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 5789999999998753 11 23232 334566666665 7999999987666554
No 131
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=42.97 E-value=35 Score=23.64 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457888888874 34444 3344555555544 7999999998887765
No 132
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=42.77 E-value=41 Score=30.76 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5688899999876432 110 134667778888887776 7888888888777643
No 133
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=41.69 E-value=1.2e+02 Score=23.61 Aligned_cols=61 Identities=7% Similarity=-0.027 Sum_probs=40.2
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSI 72 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~i 72 (261)
..-+..+|.+..+.|+|++.+.++.+++. .++. +..-...+..+|-. .+....+.+.+...
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~---~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA---SDSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEA 131 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---HCcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 34566788999999999999999999983 4443 34444455555533 44555666665543
No 134
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=40.98 E-value=1.3e+02 Score=23.71 Aligned_cols=48 Identities=6% Similarity=-0.102 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNS---PDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~---~~~A~~iAk~afd~A 208 (261)
+.|...|++|+++ .|.+| ...++.+..++ .+++ .++|+...+++++..
T Consensus 159 ~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 159 VKADSSFVKVLEL-----KPNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 5677788887754 34443 22233333333 3466 666777666666544
No 135
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=40.91 E-value=83 Score=22.80 Aligned_cols=25 Identities=24% Similarity=0.232 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 10 NVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 10 li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
+..++.+.-+.|+|++.+..+++++
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~ 35 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVY 35 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4567888889999999999998877
No 136
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=40.45 E-value=87 Score=21.48 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=40.8
Q ss_pred CCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHH
Q 024897 4 PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIV 69 (261)
Q Consensus 4 ~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l 69 (261)
+.+-.-+..++.+.-+.|+|++.+.++.+++ ..+|... .=...+..+|.. .+..-.+...+
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al---~~~p~~~-~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELV---ETDPDYV-GTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHSTTCT-HHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCcH-HHHHHHHHHHHH-cCCHHHHHHHH
Confidence 3444567789999999999999999999999 4566543 345556666643 34444444444
No 137
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=40.07 E-value=57 Score=30.13 Aligned_cols=27 Identities=7% Similarity=-0.194 Sum_probs=15.9
Q ss_pred HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 179 LALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 179 LaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
...|.+..|+. +|+.++|+...++|+.
T Consensus 76 ~~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 76 GYYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 34455554444 6777777776666554
No 138
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=39.92 E-value=81 Score=24.18 Aligned_cols=46 Identities=13% Similarity=0.051 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+. +.|.||. .-.|.++.|+. +|+.++|+..-++|+.
T Consensus 53 ~eA~~~~~~al~-----~~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 53 EEAEVFFRFLCI-----YDFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 568889998875 3566654 34455555554 7999999987666643
No 139
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=38.69 E-value=1e+02 Score=25.54 Aligned_cols=70 Identities=13% Similarity=0.149 Sum_probs=47.6
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|....|...-..|.+.|-+..--...-.+. . ++-++-.++.++++..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888742111110010 0 02245556777888888877777777654
No 140
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=38.46 E-value=69 Score=26.66 Aligned_cols=69 Identities=14% Similarity=0.259 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh----hhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQ----KEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieq----ke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|..-.|...-..|.+.|-+..--. +....+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888732110 100001 11234455677777777777777777654
No 141
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=37.87 E-value=54 Score=23.64 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|..+|++|+.+ .|.+|- ...+.++.+.. .|+.++|+...++++.
T Consensus 68 ~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 68 GLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688999998864 455553 34555555554 6888888877666553
No 142
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=37.30 E-value=53 Score=27.60 Aligned_cols=51 Identities=16% Similarity=0.047 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHh--cCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024897 155 LNAYKSAQDIANA--ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (261)
Q Consensus 155 ~~aY~~A~~~a~~--~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 209 (261)
..-|++|...... .+.|.++ ....|.+..|+ -+|+.++|+...++|+.-.-
T Consensus 51 ~~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 51 MQQPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TTCHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 3446666665544 3444443 44555555555 47999999988888876543
No 143
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=36.81 E-value=1.3e+02 Score=22.46 Aligned_cols=29 Identities=31% Similarity=0.348 Sum_probs=23.5
Q ss_pred hCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhh
Q 024897 20 AERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGAR 62 (261)
Q Consensus 20 ~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~ 62 (261)
.|||||.|++-.+.+ .+|+-|+|.+-+..
T Consensus 28 ~gkydeAIech~kAa--------------~yL~eAmkltqs~q 56 (97)
T 2crb_A 28 AGKYEEAISCHRKAT--------------TYLSEAMKLTESEQ 56 (97)
T ss_dssp TTCHHHHHHHHHHHH--------------HHHHHHHTTCCCHH
T ss_pred cCCHHHHHHHHHHHH--------------HHHHHHHHhhccHH
Confidence 499999999999988 57888888874443
No 144
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=36.73 E-value=72 Score=26.53 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH-----HhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSS-----IEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~-----ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|....|...-..|.+.|-+.. +...+ ..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~-K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALL-KDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888732 11111 001 11234455677777777777777777654
No 145
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=36.40 E-value=1.1e+02 Score=21.48 Aligned_cols=53 Identities=15% Similarity=0.025 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
..|..-|++|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 3578889999877643211 12334444455555555 58999999998888765
No 146
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=36.20 E-value=1e+02 Score=22.90 Aligned_cols=46 Identities=11% Similarity=-0.024 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+. +.|.+|.- ..|.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457788888775 35566533 3455555554 7999999988877754
No 147
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=36.00 E-value=76 Score=26.36 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH--Hhh--hhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSS--IEQ--KEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~--ieq--ke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|....|...-..|-+.|-+.. ... +....+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888732 111 111111 11234455677777777777777777654
No 148
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=35.15 E-value=1.3e+02 Score=21.76 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+...++++...
T Consensus 127 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 127 DEAIDSFKIALGL-----RPNEG---KVHRAIAFSYE-QMGRHEEALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----Cccch---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHcC
Confidence 5688888888764 23343 33445555544 4799999999888877643
No 149
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=34.88 E-value=1.6e+02 Score=24.60 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.+.|...|++|+. ++|.+|.. +-++++.|+.. .|+.++|+.+-++|+.
T Consensus 115 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 115 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 3567777777763 56666632 56677777765 5777777665555544
No 150
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=34.81 E-value=82 Score=26.17 Aligned_cols=69 Identities=19% Similarity=0.187 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHH--h--hhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSSI--E--QKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~i--e--qke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|..-.|...-..|.+.|-+..- . .+....+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999888888888877321 1 0111111 01234445677777777777777776554
No 151
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=33.90 E-value=72 Score=26.54 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024897 41 EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKL 114 (261)
Q Consensus 41 ~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 114 (261)
|+||.|-|.=|....|...-..|.+.|-+..--... -+.......+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998888888888874211000 0000000012234556677777777777777777654
No 152
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=32.91 E-value=1.3e+02 Score=21.40 Aligned_cols=46 Identities=11% Similarity=-0.030 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+ .|.|| ..-.+.++.+.. +|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4688888888753 44454 333445555544 7999998887666554
No 153
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=32.80 E-value=1.1e+02 Score=20.49 Aligned_cols=46 Identities=20% Similarity=0.361 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|+++... .|.+| ....+.+..++ -.|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 4577777777653 23333 22334444444 47888888887777664
No 154
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=32.52 E-value=1.4e+02 Score=23.54 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++++. ..|.+|..-...++.+..|+. .|+.++|+...++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 467778887764 356677555555555555554 7999999887666554
No 155
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.55 E-value=1.7e+02 Score=28.24 Aligned_cols=65 Identities=18% Similarity=0.033 Sum_probs=42.5
Q ss_pred hhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCC-CchhHHHhhhHHHHHHHHh-------------CChHHHHHHHHH
Q 024897 138 LAEFKTGDERKVAAENTLNAYKSAQDIANAELAPT-HPIRLGLALNFSVFYYEIL-------------NSPDRACNLAKQ 203 (261)
Q Consensus 138 laE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt-~pirLgLaLN~SVF~yEi~-------------~~~~~A~~iAk~ 203 (261)
.||....+.-.+++++|.++|++|++..++ +..| +|--.-.+||- +-.||.. |.-+.|-.++.+
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~ 512 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAGDYYVNAARKALNGDLEQAKIDAEK 512 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhccHHHHHHHHHHhcCccHHHHHHHHH
Confidence 467777777778999999999999999975 5544 44333334444 3346654 455555555554
Q ss_pred H
Q 024897 204 A 204 (261)
Q Consensus 204 a 204 (261)
|
T Consensus 513 A 513 (526)
T 2wb7_A 513 A 513 (526)
T ss_dssp H
T ss_pred H
Confidence 4
No 156
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=31.16 E-value=1.3e+02 Score=20.88 Aligned_cols=11 Identities=18% Similarity=0.311 Sum_probs=5.5
Q ss_pred HHHHHHHHHHH
Q 024897 153 NTLNAYKSAQD 163 (261)
Q Consensus 153 ~a~~aY~~A~~ 163 (261)
.|...|++|+.
T Consensus 61 ~A~~~~~~al~ 71 (137)
T 3q49_B 61 QALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555555543
No 157
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=30.72 E-value=87 Score=23.94 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhcC--------CCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L--------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 205 (261)
+.|...|++|+.+...+- ...+|-......|.+..++. +|+.++|+...++++
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568889999886432100 00233444566777776665 799999988766654
No 158
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=29.87 E-value=27 Score=31.33 Aligned_cols=39 Identities=28% Similarity=0.492 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHH-hhhHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGL-ALNFSVFYYEI 190 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL-aLN~SVF~yEi 190 (261)
++.+++-++|+.+|...+.|.-++.|=+ +||..+|||+.
T Consensus 212 krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~ 251 (298)
T 2r17_C 212 KRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEK 251 (298)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhC
Confidence 5789999999999998776543333333 89999999985
No 159
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=29.80 E-value=67 Score=24.00 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
.++|..+|++|.. .+|-+-...++.+..|+. +|+.++|+...++|+.
T Consensus 13 ~e~ai~~~~~a~~--------~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 13 VERYIASVQGSTP--------SPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHHHHHSC--------SHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--------cCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3556666666643 233333345677777776 6999999988877764
No 160
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=29.07 E-value=1.8e+02 Score=21.76 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=26.0
Q ss_pred hhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCC
Q 024897 7 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEEL 43 (261)
Q Consensus 7 r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~L 43 (261)
-+-+..++.+..+.|+|++.+.++.+++ ..+|..
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l---~~~p~~ 141 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNIL---KVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---TTCTTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHH---HhCccc
Confidence 4456678888888899999998888888 456654
No 161
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=28.27 E-value=2.3e+02 Score=22.58 Aligned_cols=60 Identities=18% Similarity=0.072 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCC--CCHHHHHHHHHHHhhh---------hhhhhHHHHHHHHHh
Q 024897 11 VYMAKLAEQAERYEEMVQYMEKVVASASTGEE--LTVEERNLLSVAYKNV---------IGARRASWRIVSSIE 73 (261)
Q Consensus 11 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~--Ls~eERnLlSvayKn~---------i~~~R~s~R~l~~ie 73 (261)
..+|.+..+.|+|++.+..+++++. ..|. ...+-...+..+|-+. .+....|...+..+.
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~---~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~ 222 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFD---AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLL 222 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH---HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH---HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHH
Confidence 6789999999999999999999994 3443 4556677777788654 245555666665443
No 162
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=28.14 E-value=1.2e+02 Score=22.50 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSP--DRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~--~~A~~iAk~afd 206 (261)
+.|..+|++|+.+. |.+| ....+++..+|.-.|+. ++|+...++++.
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 56889999998753 3444 24456666655557887 999887777665
No 163
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=28.12 E-value=1.3e+02 Score=25.93 Aligned_cols=46 Identities=7% Similarity=-0.012 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4577788888764 34443 233455554444 6888888777666654
No 164
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=27.30 E-value=2.8e+02 Score=23.35 Aligned_cols=27 Identities=7% Similarity=0.204 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
+-+..++.+..+.|+|++.+.++++++
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al 94 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHAL 94 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 345566666667777777777777766
No 165
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=26.48 E-value=57 Score=28.39 Aligned_cols=49 Identities=16% Similarity=0.181 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc--------------hhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHP--------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888653 2232 122466788877765 7999999998888764
No 166
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=26.11 E-value=3e+02 Score=23.36 Aligned_cols=53 Identities=8% Similarity=0.214 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 208 (261)
+.|...|++|++++...- +|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 239 ~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 578999999999987543 44444445555655554 899999998877776643
No 167
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=25.74 E-value=1.2e+02 Score=27.61 Aligned_cols=53 Identities=11% Similarity=0.064 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024897 151 AENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 212 (261)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 212 (261)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 35688888888742 23 3457888888999999999999999999999998753
No 168
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=25.61 E-value=2.1e+02 Score=21.26 Aligned_cols=56 Identities=11% Similarity=-0.094 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 210 (261)
+.|...|++|+.++.. . .+|...+.+++.-...|--.|+.++|+...++|++-+-.
T Consensus 124 ~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 124 AGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 5689999999998764 2 245555555555455555689999999888877776543
No 169
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=25.52 E-value=1.2e+02 Score=29.86 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024897 152 ENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (261)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 206 (261)
+.|.++|++|+++ .|.++ ....|.+..|++ +|+.++|+...++|+.
T Consensus 94 ~~A~~~~~kAl~l-----~P~~~---~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 94 QGALQCYTRAIQI-----NPAFA---DAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999865 34443 445666666665 7999999998888765
No 170
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=24.67 E-value=1.6e+02 Score=19.63 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024897 10 NVYMAKLAEQAERYEEMVQYMEKVVA 35 (261)
Q Consensus 10 li~~Aklaeq~eRy~Dm~~~mk~~i~ 35 (261)
+..++.+.-..|+|++.+..+++++.
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 45678888889999999999999883
No 171
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=24.64 E-value=1.4e+02 Score=24.40 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=47.7
Q ss_pred ccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCC----CchhHHHhhhHHHHHHHHhCC
Q 024897 118 AAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPT----HPIRLGLALNFSVFYYEILNS 193 (261)
Q Consensus 118 ~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt----~pirLgLaLN~SVF~yEi~~~ 193 (261)
+.++++-.-|+++--.. -.+..+ ...++-.+.|+.|.. .+||+ ..-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 44567777777652211 011122 566788899998874 46664 34556788999988 454 89
Q ss_pred hHHHHHHHHHH
Q 024897 194 PDRACNLAKQA 204 (261)
Q Consensus 194 ~~~A~~iAk~a 204 (261)
+++|.++=+.|
T Consensus 76 ~d~aR~vy~~a 86 (161)
T 4h7y_A 76 PDDARDYFQMA 86 (161)
T ss_dssp GGGCHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888776666
No 172
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=22.97 E-value=95 Score=23.39 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHhhhcCC-CCCCHHHHHHHHHHHhhhh
Q 024897 21 ERYEEMVQYMEKVVASASTG-EELTVEERNLLSVAYKNVI 59 (261)
Q Consensus 21 eRy~Dm~~~mk~~i~~~~~~-~~Ls~eERnLlSvayKn~i 59 (261)
++|+..+..++.+- ..+ ..++.+++-.|-.=||...
T Consensus 10 ~~F~~A~~~vk~l~---~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLP---KNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSC---SSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc---ccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888887754 222 3689999998888888875
No 173
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.96 E-value=2.5e+02 Score=29.06 Aligned_cols=61 Identities=11% Similarity=0.035 Sum_probs=42.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhh--hhHHHHHHHHHh
Q 024897 11 VYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGA--RRASWRIVSSIE 73 (261)
Q Consensus 11 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~--~R~s~R~l~~ie 73 (261)
...++|.++.+.|+-.+++-+..+. ...++-..-...|.+.-||..+.- .-.|.-.|.+.-
T Consensus 903 ~hv~~LFe~~~~~~~vi~fa~lAi~--~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p 965 (1139)
T 4fhn_B 903 LHLSKKLFEESAYIDALEFSLLADA--SKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS 965 (1139)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHH--HCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--hccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC
Confidence 4567899999999999999998884 233332233455888888888754 446777776553
No 174
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=22.84 E-value=1.9e+02 Score=19.76 Aligned_cols=60 Identities=8% Similarity=0.091 Sum_probs=41.5
Q ss_pred chhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024897 6 PREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVS 70 (261)
Q Consensus 6 ~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~ 70 (261)
+-.-+..++.+....|+|++.+.++++++ ..+|.. .+=...+..+|.. .+....+...+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al---~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAAL---DFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHH---HHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34456778999999999999999999999 345543 4455566666654 355555555554
No 175
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=22.07 E-value=4.1e+02 Score=23.49 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhh-hhHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGA-RRASWRIVS 70 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~-~R~s~R~l~ 70 (261)
+-+.+++.+....|+|++.+.+..+++ ..+|.. ..=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al---~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAI---ELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHH---HHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHH---HhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 445678888888999999999999999 455553 33444455555433 32 444544443
No 176
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=21.46 E-value=1.8e+02 Score=19.14 Aligned_cols=62 Identities=10% Similarity=0.093 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQ 74 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieq 74 (261)
+.+..++.+.-..|+|++.+.+..+++. .+|. +..=...+..+|-. .+....+...+.....
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~---~~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLIT---AQPQ-NPVGYSNKAMALIK-LGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHH---HCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh---cCCC-CHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4566788888888999999999999883 4443 45556667776654 4666677777654333
No 177
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=20.84 E-value=2.5e+02 Score=20.50 Aligned_cols=25 Identities=8% Similarity=0.113 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 10 NVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 10 li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
+..++.+.-+.|+|++.+.++.+++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al 38 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQAL 38 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4445555555566666666555555
No 178
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=20.50 E-value=3.1e+02 Score=21.41 Aligned_cols=62 Identities=11% Similarity=0.009 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCC--CCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHh
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGE--ELTVEERNLLSVAYKNVIGARRASWRIVSSIE 73 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~--~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ie 73 (261)
+.+..+|...-+.|+|++.+..+.+++. ..| +...+-...+..+|-. .+....+...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~---~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDN---RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH---HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 3566788888899999999999999984 333 3334445555555533 355566666665443
No 179
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=20.11 E-value=1.3e+02 Score=25.03 Aligned_cols=27 Identities=11% Similarity=0.095 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 8 EENVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 8 ~~li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
+.+..+|.+....|+|++.+.++.+++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al 31 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAI 31 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345566777777777777777777766
No 180
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=20.10 E-value=2.4e+02 Score=20.03 Aligned_cols=26 Identities=12% Similarity=0.141 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHH
Q 024897 9 ENVYMAKLAEQAERYEEMVQYMEKVV 34 (261)
Q Consensus 9 ~li~~Aklaeq~eRy~Dm~~~mk~~i 34 (261)
+++-.|--.+++|+|++.+.+-+..+
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46666777788899999999998888
Done!