Query 024900
Match_columns 261
No_of_seqs 103 out of 1675
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:19:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024900.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024900hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.5E-38 9.7E-43 264.9 22.4 244 2-245 51-294 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 4.2E-33 9.1E-38 240.8 23.8 238 2-245 110-357 (360)
3 PRK03592 haloalkane dehalogena 100.0 9.7E-32 2.1E-36 226.5 17.2 231 2-247 49-291 (295)
4 PLN02578 hydrolase 100.0 9.8E-31 2.1E-35 225.7 23.2 233 2-243 108-353 (354)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.9E-31 4.1E-36 222.7 16.8 222 2-247 47-268 (276)
6 PLN02965 Probable pheophorbida 100.0 7.6E-31 1.6E-35 216.6 17.9 218 4-245 28-253 (255)
7 PRK10349 carboxylesterase BioH 100.0 4.9E-30 1.1E-34 211.8 19.4 219 2-244 35-255 (256)
8 KOG4178 Soluble epoxide hydrol 100.0 2.3E-30 5E-35 211.8 14.7 235 3-245 67-320 (322)
9 PRK10673 acyl-CoA esterase; Pr 100.0 1.5E-29 3.2E-34 208.4 17.7 212 2-244 38-254 (255)
10 PRK06489 hypothetical protein; 100.0 2.3E-29 5E-34 217.6 19.2 235 3-245 102-357 (360)
11 KOG1454 Predicted hydrolase/ac 100.0 3.9E-30 8.4E-35 217.8 13.6 232 2-245 80-324 (326)
12 TIGR03343 biphenyl_bphD 2-hydr 100.0 4.5E-29 9.8E-34 208.6 17.7 221 4-243 58-281 (282)
13 PRK00870 haloalkane dehalogena 100.0 2E-29 4.2E-34 213.2 15.6 216 3-245 69-301 (302)
14 PRK03204 haloalkane dehalogena 100.0 1.4E-28 3E-33 206.4 19.6 221 3-242 57-285 (286)
15 PRK07581 hypothetical protein; 100.0 8.5E-29 1.8E-33 212.6 18.3 231 2-245 66-336 (339)
16 PRK08775 homoserine O-acetyltr 100.0 2.1E-28 4.6E-33 210.3 18.5 226 3-245 95-339 (343)
17 TIGR03056 bchO_mg_che_rel puta 100.0 3.7E-28 8E-33 202.2 19.0 227 2-243 50-278 (278)
18 PRK11126 2-succinyl-6-hydroxy- 100.0 5.9E-28 1.3E-32 197.4 19.4 211 5-244 26-241 (242)
19 PLN03087 BODYGUARD 1 domain co 100.0 4.8E-28 1E-32 213.4 19.7 227 5-244 231-478 (481)
20 PLN03084 alpha/beta hydrolase 100.0 2.8E-27 6.1E-32 204.5 21.3 226 2-244 149-383 (383)
21 TIGR01738 bioH putative pimelo 100.0 4E-27 8.6E-32 191.3 19.2 216 2-242 26-245 (245)
22 TIGR03611 RutD pyrimidine util 100.0 1.4E-27 3.1E-32 195.7 16.7 218 3-244 36-257 (257)
23 TIGR01392 homoserO_Ac_trn homo 100.0 4.5E-27 9.8E-32 202.7 18.1 234 3-243 69-351 (351)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 4.7E-27 1E-31 191.4 16.3 216 2-243 35-251 (251)
25 KOG4409 Predicted hydrolase/ac 99.9 1.1E-26 2.4E-31 190.9 17.6 231 2-245 112-364 (365)
26 PLN02385 hydrolase; alpha/beta 99.9 1.1E-26 2.4E-31 200.2 15.9 221 5-247 114-347 (349)
27 PRK00175 metX homoserine O-ace 99.9 2.8E-26 6E-31 199.5 18.2 237 3-246 88-375 (379)
28 PF12697 Abhydrolase_6: Alpha/ 99.9 1.1E-26 2.4E-31 186.2 11.2 207 3-237 21-228 (228)
29 PLN02894 hydrolase, alpha/beta 99.9 1.9E-25 4.2E-30 195.3 19.9 244 3-248 128-388 (402)
30 TIGR03695 menH_SHCHC 2-succiny 99.9 2.2E-25 4.7E-30 181.2 18.8 224 2-243 23-251 (251)
31 PLN02298 hydrolase, alpha/beta 99.9 7.1E-26 1.5E-30 193.8 15.7 227 5-256 86-328 (330)
32 KOG2984 Predicted hydrolase [G 99.9 5.3E-26 1.2E-30 172.7 12.6 205 7-245 72-276 (277)
33 TIGR01250 pro_imino_pep_2 prol 99.9 3.5E-25 7.6E-30 184.2 16.8 220 6-243 53-288 (288)
34 PHA02857 monoglyceride lipase; 99.9 3.8E-25 8.2E-30 184.5 16.8 213 5-245 51-273 (276)
35 PRK14875 acetoin dehydrogenase 99.9 2.5E-24 5.5E-29 186.8 19.3 212 3-244 154-370 (371)
36 PRK10749 lysophospholipase L2; 99.9 3.3E-25 7.3E-30 189.5 12.4 230 3-245 78-329 (330)
37 PF00561 Abhydrolase_1: alpha/ 99.9 1.2E-25 2.6E-30 181.6 8.0 219 7-239 1-229 (230)
38 PRK06765 homoserine O-acetyltr 99.9 5.4E-24 1.2E-28 184.5 18.5 235 5-244 98-387 (389)
39 PLN02211 methyl indole-3-aceta 99.9 6.3E-24 1.4E-28 176.9 17.7 215 5-244 44-269 (273)
40 PLN02980 2-oxoglutarate decarb 99.9 5.2E-24 1.1E-28 212.1 19.4 234 2-246 1393-1640(1655)
41 PLN02511 hydrolase 99.9 4.2E-23 9E-28 179.9 16.1 226 3-247 126-367 (388)
42 TIGR01249 pro_imino_pep_1 prol 99.9 7.8E-23 1.7E-27 173.2 16.4 80 4-88 51-130 (306)
43 PRK05855 short chain dehydroge 99.9 9.7E-23 2.1E-27 186.7 16.5 232 2-247 47-294 (582)
44 PLN02652 hydrolase; alpha/beta 99.9 4.3E-22 9.3E-27 173.3 16.8 216 4-247 161-389 (395)
45 KOG2382 Predicted alpha/beta h 99.9 9E-21 2E-25 155.7 18.1 219 7-245 81-313 (315)
46 COG2267 PldB Lysophospholipase 99.9 1.9E-20 4.1E-25 157.1 18.6 227 3-247 58-296 (298)
47 PRK05077 frsA fermentation/res 99.8 1.9E-19 4.2E-24 157.8 19.0 190 4-245 220-412 (414)
48 TIGR03100 hydr1_PEP hydrolase, 99.8 1.5E-19 3.2E-24 150.7 15.8 200 5-243 56-273 (274)
49 TIGR01607 PST-A Plasmodium sub 99.8 4.1E-19 8.9E-24 151.9 16.3 220 4-243 72-331 (332)
50 TIGR01838 PHA_synth_I poly(R)- 99.8 2E-18 4.3E-23 154.1 18.1 225 3-233 217-463 (532)
51 COG0596 MhpC Predicted hydrola 99.8 2.6E-18 5.7E-23 139.6 16.0 222 7-243 51-280 (282)
52 COG1647 Esterase/lipase [Gener 99.8 3.1E-18 6.8E-23 132.5 14.2 197 5-244 41-243 (243)
53 PRK10985 putative hydrolase; P 99.8 8.8E-18 1.9E-22 143.4 17.9 216 4-245 85-320 (324)
54 KOG1455 Lysophospholipase [Lip 99.8 1.7E-18 3.6E-23 140.4 11.0 218 4-245 80-312 (313)
55 TIGR01836 PHA_synth_III_C poly 99.8 1.4E-17 2.9E-22 143.7 16.3 226 4-244 92-349 (350)
56 PRK07868 acyl-CoA synthetase; 99.7 1.4E-16 3.1E-21 154.0 15.7 236 4-247 97-363 (994)
57 PLN02872 triacylglycerol lipas 99.7 4.7E-16 1E-20 135.1 15.9 235 5-246 106-390 (395)
58 PRK11071 esterase YqiA; Provis 99.7 1.2E-15 2.7E-20 120.2 15.1 159 5-243 31-189 (190)
59 KOG2564 Predicted acetyltransf 99.7 4.4E-16 9.6E-21 124.5 9.6 211 6-250 102-332 (343)
60 PRK13604 luxD acyl transferase 99.6 3.7E-15 8E-20 123.8 13.8 191 4-245 62-259 (307)
61 PF03096 Ndr: Ndr family; Int 99.6 1.5E-14 3.2E-19 118.0 14.2 223 3-245 52-279 (283)
62 PRK10566 esterase; Provisional 99.6 2.5E-14 5.4E-19 117.4 15.4 61 181-245 181-248 (249)
63 KOG2931 Differentiation-relate 99.6 3E-13 6.4E-18 109.2 19.2 224 3-245 75-306 (326)
64 COG2021 MET2 Homoserine acetyl 99.6 1.5E-13 3.2E-18 115.0 16.5 237 5-244 91-367 (368)
65 KOG1552 Predicted alpha/beta h 99.6 3.8E-14 8.2E-19 113.0 12.4 165 6-248 88-255 (258)
66 COG3208 GrsT Predicted thioest 99.6 2.4E-13 5.2E-18 107.7 16.3 202 2-244 29-235 (244)
67 PF00326 Peptidase_S9: Prolyl 99.5 9.6E-14 2.1E-18 111.4 9.8 186 4-246 12-210 (213)
68 TIGR03101 hydr2_PEP hydrolase, 99.5 7.7E-14 1.7E-18 115.0 9.4 76 5-87 55-133 (266)
69 KOG4667 Predicted esterase [Li 99.4 3E-12 6.5E-17 99.0 13.3 191 5-242 61-255 (269)
70 PF12695 Abhydrolase_5: Alpha/ 99.4 7.2E-13 1.6E-17 99.4 8.2 121 4-225 24-145 (145)
71 TIGR01839 PHA_synth_II poly(R) 99.4 8.6E-11 1.9E-15 104.7 19.6 211 3-226 244-482 (560)
72 TIGR03230 lipo_lipase lipoprot 99.3 5E-12 1.1E-16 110.4 9.3 77 5-88 72-154 (442)
73 KOG4391 Predicted alpha/beta h 99.3 7.9E-12 1.7E-16 96.8 6.7 182 6-254 106-292 (300)
74 PF06342 DUF1057: Alpha/beta h 99.3 1.6E-10 3.5E-15 93.6 14.2 77 4-88 60-137 (297)
75 TIGR02821 fghA_ester_D S-formy 99.2 3.5E-10 7.7E-15 94.4 15.6 83 5-87 71-172 (275)
76 PLN02442 S-formylglutathione h 99.2 3.6E-10 7.9E-15 94.7 15.3 51 37-87 127-177 (283)
77 COG0429 Predicted hydrolase of 99.2 2.3E-09 4.9E-14 88.8 17.0 67 178-244 267-339 (345)
78 TIGR01849 PHB_depoly_PhaZ poly 99.2 1.7E-10 3.6E-15 99.9 10.3 229 3-245 127-406 (406)
79 PRK11460 putative hydrolase; P 99.1 1.3E-09 2.8E-14 88.7 13.3 44 185-228 148-195 (232)
80 TIGR00976 /NonD putative hydro 99.1 1.2E-09 2.5E-14 99.9 13.8 78 3-88 50-132 (550)
81 PLN00021 chlorophyllase 99.1 1.8E-09 4E-14 91.3 13.2 71 5-86 78-164 (313)
82 cd00707 Pancreat_lipase_like P 99.1 1.5E-10 3.2E-15 96.5 5.7 78 5-89 65-148 (275)
83 PF00975 Thioesterase: Thioest 99.1 3.8E-09 8.3E-14 85.5 13.8 77 3-88 23-104 (229)
84 KOG1838 Alpha/beta hydrolase [ 99.0 1.7E-08 3.6E-13 86.5 16.3 219 3-244 151-387 (409)
85 PF06500 DUF1100: Alpha/beta h 99.0 7E-09 1.5E-13 89.3 14.1 189 4-245 216-409 (411)
86 COG1506 DAP2 Dipeptidyl aminop 99.0 2.7E-09 5.8E-14 98.7 12.5 188 3-247 420-618 (620)
87 PF10230 DUF2305: Uncharacteri 99.0 1.3E-08 2.9E-13 84.3 14.9 85 3-88 29-122 (266)
88 TIGR01840 esterase_phb esteras 99.0 3.1E-09 6.7E-14 85.3 10.4 84 5-88 42-130 (212)
89 PRK05371 x-prolyl-dipeptidyl a 99.0 2.4E-08 5.3E-13 93.9 17.9 77 3-87 276-372 (767)
90 KOG2565 Predicted hydrolases o 99.0 4.5E-09 9.8E-14 87.8 10.9 72 7-84 189-260 (469)
91 PRK10252 entF enterobactin syn 98.9 2.2E-08 4.8E-13 100.3 15.8 77 2-87 1090-1170(1296)
92 PF02230 Abhydrolase_2: Phosph 98.9 2E-08 4.4E-13 80.8 12.3 124 36-245 83-215 (216)
93 COG3243 PhaC Poly(3-hydroxyalk 98.9 6.8E-08 1.5E-12 82.5 14.0 76 3-88 136-217 (445)
94 PF06821 Ser_hydrolase: Serine 98.8 1.9E-08 4.1E-13 77.7 8.4 125 35-235 38-163 (171)
95 PF05448 AXE1: Acetyl xylan es 98.8 2.6E-07 5.7E-12 78.4 16.0 190 5-245 108-320 (320)
96 COG4757 Predicted alpha/beta h 98.8 1.2E-08 2.6E-13 80.2 6.9 206 5-241 56-279 (281)
97 PF01738 DLH: Dienelactone hyd 98.8 2.1E-08 4.5E-13 80.8 8.5 155 4-245 39-217 (218)
98 PLN02733 phosphatidylcholine-s 98.8 6.4E-09 1.4E-13 91.5 5.3 81 4-89 118-202 (440)
99 PTZ00472 serine carboxypeptida 98.8 6.8E-07 1.5E-11 79.7 18.0 79 4-87 119-215 (462)
100 COG2945 Predicted hydrolase of 98.8 2.6E-07 5.7E-12 70.8 12.7 145 5-243 59-205 (210)
101 PRK10162 acetyl esterase; Prov 98.7 3.6E-07 7.7E-12 77.9 12.8 76 5-87 111-194 (318)
102 TIGR03502 lipase_Pla1_cef extr 98.7 7.7E-08 1.7E-12 89.5 8.9 70 5-74 475-576 (792)
103 PF08840 BAAT_C: BAAT / Acyl-C 98.6 4.9E-08 1.1E-12 78.3 4.3 50 39-89 5-57 (213)
104 PF08538 DUF1749: Protein of u 98.5 5.7E-07 1.2E-11 74.6 9.4 53 35-87 82-147 (303)
105 PF05728 UPF0227: Uncharacteri 98.5 5.5E-06 1.2E-10 64.8 13.7 53 34-89 40-92 (187)
106 COG3571 Predicted hydrolase of 98.5 2.9E-06 6.4E-11 63.2 11.0 136 5-226 42-182 (213)
107 PF02129 Peptidase_S15: X-Pro 98.4 4.7E-07 1E-11 75.4 6.9 77 3-87 54-135 (272)
108 smart00824 PKS_TE Thioesterase 98.4 1.7E-06 3.6E-11 68.5 9.7 77 2-87 21-101 (212)
109 COG0412 Dienelactone hydrolase 98.4 1E-05 2.2E-10 65.9 14.1 140 4-229 52-206 (236)
110 PF09752 DUF2048: Uncharacteri 98.4 4.9E-06 1.1E-10 70.2 12.3 57 186-243 290-347 (348)
111 COG3545 Predicted esterase of 98.4 1.3E-05 2.8E-10 60.8 11.9 135 34-244 41-178 (181)
112 COG0400 Predicted esterase [Ge 98.3 4.7E-06 1E-10 66.1 9.6 50 38-87 82-133 (207)
113 PF07819 PGAP1: PGAP1-like pro 98.3 4.3E-06 9.4E-11 67.6 8.3 75 5-89 38-124 (225)
114 PF02273 Acyl_transf_2: Acyl t 98.3 2.9E-05 6.2E-10 62.0 12.4 190 3-243 54-250 (294)
115 PRK10115 protease 2; Provision 98.3 5.3E-05 1.2E-09 71.1 16.2 85 2-87 470-558 (686)
116 PF06028 DUF915: Alpha/beta hy 98.2 1.4E-05 2.9E-10 65.6 10.4 55 35-89 81-144 (255)
117 COG3458 Acetyl esterase (deace 98.2 1.9E-05 4E-10 64.0 10.8 188 4-244 107-316 (321)
118 COG3319 Thioesterase domains o 98.2 5.3E-06 1.1E-10 67.9 7.6 79 2-89 22-104 (257)
119 PF11339 DUF3141: Protein of u 98.2 0.00011 2.3E-09 64.9 15.8 57 33-89 115-176 (581)
120 KOG4627 Kynurenine formamidase 98.1 9.3E-06 2E-10 63.0 6.7 153 3-230 94-252 (270)
121 PF12146 Hydrolase_4: Putative 98.1 6.9E-06 1.5E-10 54.9 4.6 39 4-48 41-79 (79)
122 PF08386 Abhydrolase_4: TAP-li 98.0 1.2E-05 2.6E-10 56.7 5.5 61 184-244 33-93 (103)
123 KOG1553 Predicted alpha/beta h 98.0 1.8E-05 3.9E-10 66.1 6.4 74 3-84 265-341 (517)
124 PF03583 LIP: Secretory lipase 97.9 0.00053 1.1E-08 57.7 14.5 61 183-248 217-284 (290)
125 PF05677 DUF818: Chlamydia CHL 97.7 0.00026 5.5E-09 59.6 8.1 60 5-74 170-236 (365)
126 KOG1551 Uncharacterized conser 97.6 0.0011 2.3E-08 53.8 10.5 57 188-245 309-366 (371)
127 KOG3043 Predicted hydrolase re 97.6 0.00011 2.4E-09 57.9 4.6 64 181-244 160-239 (242)
128 PF10142 PhoPQ_related: PhoPQ- 97.6 0.003 6.6E-08 54.5 13.6 61 182-245 259-320 (367)
129 KOG3975 Uncharacterized conser 97.6 0.0019 4E-08 52.0 11.3 227 5-242 58-300 (301)
130 PF03959 FSH1: Serine hydrolas 97.5 0.00027 5.9E-09 56.6 6.5 49 182-231 158-207 (212)
131 COG0657 Aes Esterase/lipase [L 97.5 0.0047 1E-07 52.4 13.9 75 4-88 108-191 (312)
132 cd00741 Lipase Lipase. Lipase 97.5 0.00034 7.3E-09 52.9 6.0 51 37-87 8-66 (153)
133 PF05577 Peptidase_S28: Serine 97.4 0.00039 8.5E-09 61.9 6.7 82 7-88 60-148 (434)
134 PF12715 Abhydrolase_7: Abhydr 97.4 0.00062 1.3E-08 58.4 7.1 79 4-85 158-257 (390)
135 PF12740 Chlorophyllase2: Chlo 97.3 0.0004 8.6E-09 56.8 5.1 73 4-87 42-130 (259)
136 PRK10439 enterobactin/ferric e 97.2 0.00077 1.7E-08 59.5 6.5 51 37-87 267-322 (411)
137 PF07859 Abhydrolase_3: alpha/ 97.2 0.00067 1.5E-08 54.0 5.0 69 5-87 28-109 (211)
138 PF01764 Lipase_3: Lipase (cla 97.2 0.00085 1.8E-08 49.7 5.1 37 38-74 49-85 (140)
139 PF02450 LCAT: Lecithin:choles 97.1 0.00092 2E-08 58.6 5.6 52 38-89 101-161 (389)
140 PF10503 Esterase_phd: Esteras 97.1 0.0032 7E-08 50.6 8.1 44 45-88 87-132 (220)
141 PF00756 Esterase: Putative es 97.1 0.0015 3.3E-08 53.4 6.3 49 39-87 98-149 (251)
142 COG4188 Predicted dienelactone 97.1 0.0012 2.6E-08 56.2 5.6 56 179-234 245-303 (365)
143 KOG3253 Predicted alpha/beta h 97.0 0.0015 3.3E-08 58.7 6.2 48 181-228 300-348 (784)
144 PF00151 Lipase: Lipase; Inte 97.0 0.0015 3.3E-08 55.8 6.1 79 5-90 103-189 (331)
145 COG1075 LipA Predicted acetylt 96.9 0.0021 4.5E-08 55.3 6.2 55 35-89 109-165 (336)
146 KOG1515 Arylacetamide deacetyl 96.9 0.073 1.6E-06 45.6 14.8 63 182-244 264-334 (336)
147 PF11187 DUF2974: Protein of u 96.8 0.0032 7E-08 50.8 5.7 35 53-87 84-122 (224)
148 PF05705 DUF829: Eukaryotic pr 96.8 0.09 2E-06 42.8 14.2 60 183-242 176-240 (240)
149 PRK04940 hypothetical protein; 96.6 0.0075 1.6E-07 46.6 6.4 49 38-89 41-93 (180)
150 KOG2624 Triglyceride lipase-ch 96.6 0.021 4.5E-07 50.1 9.8 83 5-90 105-201 (403)
151 KOG2100 Dipeptidyl aminopeptid 96.6 0.023 5E-07 54.1 10.9 84 3-86 555-642 (755)
152 PF05057 DUF676: Putative seri 96.6 0.0033 7.2E-08 50.5 4.6 35 38-72 61-97 (217)
153 cd00519 Lipase_3 Lipase (class 96.6 0.0044 9.5E-08 50.2 5.3 23 52-74 127-149 (229)
154 COG2936 Predicted acyl esteras 96.6 0.005 1.1E-07 55.6 5.9 79 3-88 77-159 (563)
155 PF06057 VirJ: Bacterial virul 96.5 0.0056 1.2E-07 47.6 5.3 71 5-87 28-106 (192)
156 COG2819 Predicted hydrolase of 96.5 0.0047 1E-07 50.5 5.0 37 52-88 136-172 (264)
157 PF01674 Lipase_2: Lipase (cla 96.5 0.0099 2.1E-07 47.7 6.7 73 4-85 27-106 (219)
158 KOG2551 Phospholipase/carboxyh 96.5 0.0071 1.5E-07 47.9 5.6 60 182-244 160-219 (230)
159 PF07224 Chlorophyllase: Chlor 96.4 0.0058 1.2E-07 49.7 5.0 77 4-87 71-156 (307)
160 PF04301 DUF452: Protein of un 96.4 0.14 3E-06 40.9 12.3 38 51-90 55-92 (213)
161 PLN02162 triacylglycerol lipas 96.4 0.0083 1.8E-07 52.9 5.9 35 38-72 263-297 (475)
162 COG0627 Predicted esterase [Ge 96.3 0.0087 1.9E-07 50.8 5.8 55 34-88 127-187 (316)
163 PF06259 Abhydrolase_8: Alpha/ 96.3 0.012 2.5E-07 45.6 5.7 52 36-87 87-143 (177)
164 KOG2112 Lysophospholipase [Lip 96.2 0.084 1.8E-06 41.5 10.0 56 185-244 144-203 (206)
165 PLN00413 triacylglycerol lipas 96.2 0.013 2.8E-07 51.8 6.1 35 38-72 269-303 (479)
166 KOG2281 Dipeptidyl aminopeptid 96.1 0.0078 1.7E-07 54.7 4.6 80 3-82 673-756 (867)
167 KOG4840 Predicted hydrolases o 96.1 0.11 2.4E-06 41.4 10.1 52 35-86 85-142 (299)
168 PF05990 DUF900: Alpha/beta hy 96.0 0.0099 2.1E-07 48.3 4.3 74 8-87 50-136 (233)
169 KOG3724 Negative regulator of 95.9 0.011 2.4E-07 54.9 4.6 34 54-87 183-219 (973)
170 PF00450 Peptidase_S10: Serine 95.9 0.031 6.6E-07 49.3 7.3 80 5-88 84-181 (415)
171 PLN02571 triacylglycerol lipas 95.8 0.014 3E-07 51.0 4.8 36 38-73 209-246 (413)
172 KOG2183 Prolylcarboxypeptidase 95.8 0.02 4.3E-07 49.5 5.4 81 7-87 112-201 (492)
173 PLN02454 triacylglycerol lipas 95.8 0.017 3.6E-07 50.5 5.1 20 54-73 229-248 (414)
174 KOG2369 Lecithin:cholesterol a 95.7 0.012 2.6E-07 51.7 4.0 38 51-88 180-225 (473)
175 PLN02517 phosphatidylcholine-s 95.5 0.025 5.5E-07 51.4 5.0 37 52-88 212-263 (642)
176 PLN02408 phospholipase A1 95.4 0.027 6E-07 48.5 4.9 34 41-74 186-221 (365)
177 COG1073 Hydrolases of the alph 95.4 0.036 7.8E-07 45.9 5.6 65 181-245 227-297 (299)
178 PF03403 PAF-AH_p_II: Platelet 95.3 0.0071 1.5E-07 52.8 1.2 35 53-88 228-262 (379)
179 KOG2182 Hydrolytic enzymes of 95.2 0.061 1.3E-06 47.7 6.6 83 6-88 118-207 (514)
180 PF05277 DUF726: Protein of un 95.0 0.041 8.9E-07 47.2 4.9 38 51-88 218-260 (345)
181 PLN02934 triacylglycerol lipas 95.0 0.04 8.7E-07 49.2 4.9 35 38-72 306-340 (515)
182 PLN02324 triacylglycerol lipas 94.9 0.045 9.9E-07 47.8 4.9 33 41-73 201-235 (415)
183 PLN02310 triacylglycerol lipas 94.9 0.069 1.5E-06 46.7 6.0 34 40-73 192-229 (405)
184 COG4814 Uncharacterized protei 94.8 0.04 8.6E-07 44.7 4.0 44 45-88 128-176 (288)
185 PLN02802 triacylglycerol lipas 94.7 0.052 1.1E-06 48.5 4.7 35 40-74 315-351 (509)
186 KOG3101 Esterase D [General fu 94.6 0.0056 1.2E-07 48.1 -1.2 52 33-86 116-174 (283)
187 PLN02753 triacylglycerol lipas 94.4 0.066 1.4E-06 48.1 4.8 21 53-73 312-332 (531)
188 COG3509 LpqC Poly(3-hydroxybut 94.4 0.16 3.4E-06 42.3 6.6 49 40-88 129-179 (312)
189 PF00450 Peptidase_S10: Serine 94.2 0.037 8E-07 48.8 3.0 59 185-243 330-414 (415)
190 COG3150 Predicted esterase [Ge 94.2 0.13 2.8E-06 39.1 5.2 51 35-88 41-91 (191)
191 COG4287 PqaA PhoPQ-activated p 94.1 1 2.2E-05 38.8 11.0 61 182-245 326-387 (507)
192 COG4099 Predicted peptidase [G 94.1 0.095 2.1E-06 43.6 4.8 40 47-86 261-302 (387)
193 COG2382 Fes Enterochelin ester 94.1 0.074 1.6E-06 44.3 4.2 35 53-87 177-211 (299)
194 cd00312 Esterase_lipase Estera 94.1 0.091 2E-06 47.6 5.2 77 7-88 126-213 (493)
195 PLN03037 lipase class 3 family 94.0 0.09 2E-06 47.2 4.7 34 40-73 301-338 (525)
196 PLN02719 triacylglycerol lipas 93.9 0.093 2E-06 47.0 4.7 20 54-73 299-318 (518)
197 PLN02761 lipase class 3 family 93.7 0.11 2.3E-06 46.7 4.8 20 54-73 295-314 (527)
198 PF12048 DUF3530: Protein of u 93.6 0.22 4.7E-06 42.4 6.3 41 47-87 187-228 (310)
199 KOG4569 Predicted lipase [Lipi 93.6 0.11 2.5E-06 44.6 4.6 37 37-73 155-191 (336)
200 PLN02847 triacylglycerol lipas 93.4 0.14 3E-06 46.8 4.9 21 53-73 251-271 (633)
201 PLN02213 sinapoylglucose-malat 93.3 0.36 7.8E-06 41.2 7.2 59 185-244 233-316 (319)
202 PF01083 Cutinase: Cutinase; 93.2 0.2 4.3E-06 38.9 5.1 37 52-88 80-122 (179)
203 COG4782 Uncharacterized protei 92.9 0.17 3.8E-06 43.2 4.6 39 34-72 172-210 (377)
204 PLN02213 sinapoylglucose-malat 92.8 0.24 5.2E-06 42.3 5.5 76 7-87 2-95 (319)
205 PF11144 DUF2920: Protein of u 92.5 0.28 6.1E-06 42.8 5.5 34 54-87 185-218 (403)
206 COG4947 Uncharacterized protei 91.1 0.28 6.2E-06 37.5 3.4 41 48-88 96-136 (227)
207 PLN02633 palmitoyl protein thi 90.9 0.72 1.6E-05 38.9 6.0 56 35-90 74-133 (314)
208 KOG2029 Uncharacterized conser 90.8 0.39 8.4E-06 43.7 4.5 54 35-88 505-572 (697)
209 PLN03016 sinapoylglucose-malat 90.5 0.66 1.4E-05 41.4 5.8 59 185-244 347-430 (433)
210 PF11288 DUF3089: Protein of u 90.3 0.69 1.5E-05 36.7 5.2 39 36-74 77-116 (207)
211 PLN03016 sinapoylglucose-malat 89.7 1.1 2.4E-05 40.0 6.6 77 5-86 114-208 (433)
212 PLN02209 serine carboxypeptida 89.7 0.78 1.7E-05 41.0 5.6 59 185-244 351-434 (437)
213 KOG3847 Phospholipase A2 (plat 89.3 0.18 3.8E-06 42.3 1.2 47 44-91 232-278 (399)
214 PLN02209 serine carboxypeptida 89.2 1.2 2.6E-05 39.8 6.5 78 5-87 116-211 (437)
215 PLN02606 palmitoyl-protein thi 89.2 1.2 2.5E-05 37.6 5.9 56 35-90 75-134 (306)
216 KOG1282 Serine carboxypeptidas 88.9 0.73 1.6E-05 41.2 4.8 61 185-245 363-448 (454)
217 COG1770 PtrB Protease II [Amin 88.8 12 0.00025 35.1 12.3 52 34-86 506-560 (682)
218 PF07082 DUF1350: Protein of u 87.9 0.61 1.3E-05 38.0 3.3 33 54-86 91-123 (250)
219 PF10340 DUF2424: Protein of u 87.3 2.9 6.3E-05 36.4 7.3 57 35-91 177-238 (374)
220 PF02089 Palm_thioest: Palmito 86.8 2.3 5.1E-05 35.4 6.3 54 36-89 61-117 (279)
221 KOG4540 Putative lipase essent 86.4 1.1 2.3E-05 37.3 4.0 23 52-74 275-297 (425)
222 COG5153 CVT17 Putative lipase 86.4 1.1 2.3E-05 37.3 4.0 23 52-74 275-297 (425)
223 COG2939 Carboxypeptidase C (ca 85.5 2.9 6.3E-05 37.6 6.5 77 6-87 146-235 (498)
224 KOG3967 Uncharacterized conser 85.5 1.1 2.4E-05 35.6 3.5 42 46-87 183-226 (297)
225 PF06850 PHB_depo_C: PHB de-po 81.6 2.5 5.4E-05 33.2 4.0 64 182-245 130-202 (202)
226 KOG4372 Predicted alpha/beta h 81.4 0.57 1.2E-05 40.7 0.5 33 38-70 135-167 (405)
227 PF07859 Abhydrolase_3: alpha/ 77.3 1.2 2.5E-05 35.1 1.1 41 186-226 167-209 (211)
228 PF05576 Peptidase_S37: PS-10 77.1 1.6 3.4E-05 38.3 1.9 76 8-87 90-168 (448)
229 PF00135 COesterase: Carboxyle 76.8 3.5 7.6E-05 37.5 4.2 44 45-88 198-245 (535)
230 cd01714 ETF_beta The electron 75.6 10 0.00023 30.0 6.1 51 33-84 90-145 (202)
231 COG3946 VirJ Type IV secretory 75.3 5.3 0.00012 35.0 4.5 59 5-75 286-348 (456)
232 PF09949 DUF2183: Uncharacteri 75.0 7.6 0.00016 27.0 4.5 44 40-83 52-97 (100)
233 COG2272 PnbA Carboxylesterase 74.7 2.9 6.4E-05 37.5 2.9 46 43-88 168-217 (491)
234 PF08237 PE-PPE: PE-PPE domain 70.4 23 0.00049 28.6 7.0 39 35-73 28-68 (225)
235 KOG2237 Predicted serine prote 70.4 7.3 0.00016 36.2 4.4 81 4-84 497-580 (712)
236 PF00698 Acyl_transf_1: Acyl t 69.5 4.1 8.9E-05 34.7 2.7 29 44-72 75-103 (318)
237 smart00827 PKS_AT Acyl transfe 69.5 6.1 0.00013 33.1 3.7 28 45-72 74-101 (298)
238 TIGR03131 malonate_mdcH malona 68.5 6.7 0.00014 32.9 3.7 29 45-73 68-96 (295)
239 KOG2541 Palmitoyl protein thio 67.9 16 0.00034 30.4 5.4 55 35-89 72-129 (296)
240 PF07519 Tannase: Tannase and 67.6 11 0.00025 34.1 5.1 36 53-88 115-150 (474)
241 TIGR00128 fabD malonyl CoA-acy 66.2 7.5 0.00016 32.4 3.6 29 45-73 74-103 (290)
242 KOG1202 Animal-type fatty acid 64.7 15 0.00032 37.1 5.4 56 35-90 2163-2221(2376)
243 KOG2385 Uncharacterized conser 63.2 10 0.00022 34.4 3.8 42 48-89 442-488 (633)
244 cd07225 Pat_PNPLA6_PNPLA7 Pata 62.9 11 0.00023 32.1 3.9 30 45-74 35-64 (306)
245 PF06057 VirJ: Bacterial virul 60.5 29 0.00062 27.3 5.5 56 181-243 134-190 (192)
246 PF11713 Peptidase_C80: Peptid 59.3 6.5 0.00014 29.8 1.8 48 14-65 61-116 (157)
247 PRK10279 hypothetical protein; 58.7 13 0.00029 31.4 3.7 32 45-76 25-56 (300)
248 cd07198 Patatin Patatin-like p 58.6 16 0.00035 27.8 3.9 29 46-74 19-47 (172)
249 PF07519 Tannase: Tannase and 57.9 27 0.00058 31.7 5.7 61 184-244 352-426 (474)
250 COG1752 RssA Predicted esteras 57.2 15 0.00033 31.0 3.9 30 45-74 31-60 (306)
251 KOG1282 Serine carboxypeptidas 56.5 30 0.00064 31.2 5.6 79 5-87 116-212 (454)
252 cd07207 Pat_ExoU_VipD_like Exo 56.5 17 0.00036 28.2 3.8 28 47-74 21-48 (194)
253 COG0218 Predicted GTPase [Gene 56.5 19 0.0004 28.5 3.9 15 9-23 72-86 (200)
254 TIGR02816 pfaB_fam PfaB family 55.6 14 0.00031 34.0 3.6 30 45-74 256-286 (538)
255 cd07227 Pat_Fungal_NTE1 Fungal 55.5 18 0.00038 30.2 3.8 30 45-74 30-59 (269)
256 PF05577 Peptidase_S28: Serine 55.0 13 0.00028 33.1 3.3 39 186-227 377-415 (434)
257 cd07210 Pat_hypo_W_succinogene 53.5 22 0.00047 28.6 4.0 28 47-74 22-49 (221)
258 COG1505 Serine proteases of th 48.5 48 0.0011 30.8 5.7 82 3-85 447-532 (648)
259 KOG1283 Serine carboxypeptidas 48.2 24 0.00051 30.2 3.4 77 8-88 73-166 (414)
260 cd07209 Pat_hypo_Ecoli_Z1214_l 46.7 30 0.00065 27.6 3.8 30 47-76 20-49 (215)
261 cd07228 Pat_NTE_like_bacteria 45.4 31 0.00068 26.3 3.7 29 47-75 22-50 (175)
262 PF05576 Peptidase_S37: PS-10 45.3 38 0.00083 30.0 4.4 57 185-243 351-412 (448)
263 cd07230 Pat_TGL4-5_like Triacy 43.2 23 0.0005 31.6 2.9 33 49-81 97-129 (421)
264 PF00070 Pyr_redox: Pyridine n 42.7 19 0.00041 23.4 1.8 31 54-87 1-31 (80)
265 PF03490 Varsurf_PPLC: Variant 41.8 26 0.00056 20.7 2.0 30 34-63 6-36 (51)
266 cd07208 Pat_hypo_Ecoli_yjju_li 39.3 46 0.00099 27.4 4.0 31 47-77 20-51 (266)
267 PF07521 RMMBL: RNA-metabolisi 38.9 39 0.00085 19.2 2.5 18 41-58 21-38 (43)
268 smart00824 PKS_TE Thioesterase 38.7 36 0.00078 26.0 3.1 59 182-241 150-211 (212)
269 PF10605 3HBOH: 3HB-oligomer h 38.5 22 0.00047 33.0 2.0 34 55-88 287-321 (690)
270 cd07212 Pat_PNPLA9 Patatin-lik 38.5 61 0.0013 27.6 4.6 19 56-74 35-53 (312)
271 cd07231 Pat_SDP1-like Sugar-De 38.3 32 0.0007 29.4 2.9 34 48-81 91-124 (323)
272 KOG1516 Carboxylesterase and r 37.7 44 0.00096 30.7 4.0 55 33-87 170-231 (545)
273 cd07205 Pat_PNPLA6_PNPLA7_NTE1 37.6 54 0.0012 24.9 3.9 28 47-74 22-49 (175)
274 COG2939 Carboxypeptidase C (ca 37.4 49 0.0011 30.1 3.9 58 186-244 426-490 (498)
275 cd07232 Pat_PLPL Patain-like p 37.1 28 0.00061 30.9 2.5 34 49-82 91-124 (407)
276 cd07229 Pat_TGL3_like Triacylg 35.4 32 0.00069 30.3 2.5 36 47-82 105-140 (391)
277 cd07224 Pat_like Patatin-like 34.4 62 0.0013 26.2 3.9 29 47-75 21-51 (233)
278 cd07222 Pat_PNPLA4 Patatin-lik 33.4 45 0.00097 27.3 3.0 24 55-79 33-56 (246)
279 TIGR03712 acc_sec_asp2 accesso 33.3 51 0.0011 29.9 3.4 37 40-76 342-381 (511)
280 PF03681 UPF0150: Uncharacteri 31.9 66 0.0014 18.5 2.8 33 4-48 11-43 (48)
281 PF00448 SRP54: SRP54-type pro 31.5 1.3E+02 0.0028 23.6 5.2 65 5-84 82-148 (196)
282 PF14253 AbiH: Bacteriophage a 31.2 52 0.0011 27.0 3.0 14 52-65 234-247 (270)
283 PRK07877 hypothetical protein; 31.1 75 0.0016 30.6 4.4 38 47-87 102-140 (722)
284 cd01311 PDC_hydrolase 2-pyrone 30.8 2.1E+02 0.0047 23.3 6.7 70 5-86 5-78 (263)
285 COG1576 Uncharacterized conser 30.7 1.5E+02 0.0033 22.4 5.1 51 3-69 64-114 (155)
286 cd07204 Pat_PNPLA_like Patatin 30.3 78 0.0017 25.8 3.9 22 56-77 34-56 (243)
287 PRK04940 hypothetical protein; 29.3 2.1E+02 0.0045 22.3 5.8 51 188-244 127-179 (180)
288 cd07218 Pat_iPLA2 Calcium-inde 28.9 88 0.0019 25.6 4.0 21 55-75 32-52 (245)
289 cd01985 ETF The electron trans 28.8 1.2E+02 0.0025 23.3 4.5 51 33-84 73-125 (181)
290 KOG1336 Monodehydroascorbate/f 28.8 73 0.0016 28.8 3.6 44 41-87 201-245 (478)
291 PF12242 Eno-Rase_NADH_b: NAD( 28.7 1.8E+02 0.0038 19.2 4.8 37 38-74 21-61 (78)
292 PF15660 Imm49: Immunity prote 28.6 47 0.001 20.8 1.7 21 32-52 62-82 (84)
293 TIGR02354 thiF_fam2 thiamine b 28.1 1.1E+02 0.0024 24.1 4.3 40 45-87 14-54 (200)
294 PRK06731 flhF flagellar biosyn 27.9 3.6E+02 0.0077 22.5 7.7 64 6-84 154-219 (270)
295 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.6 87 0.0019 26.5 3.6 29 50-78 94-122 (298)
296 PF10929 DUF2811: Protein of u 26.4 45 0.00098 20.5 1.4 25 224-248 20-44 (57)
297 COG4850 Uncharacterized conser 25.6 1E+02 0.0022 26.5 3.7 45 42-87 267-314 (373)
298 PRK12467 peptide synthase; Pro 25.4 2.1E+02 0.0046 33.7 7.2 75 3-86 3715-3793(3956)
299 PF07643 DUF1598: Protein of u 25.4 1.8E+02 0.0039 19.4 4.1 36 35-73 28-63 (84)
300 PRK14974 cell division protein 25.3 2.9E+02 0.0062 23.9 6.6 65 5-84 221-287 (336)
301 PF03405 FA_desaturase_2: Fatt 25.1 37 0.0008 29.2 1.1 68 12-81 231-305 (330)
302 PLN00179 acyl- [acyl-carrier p 24.9 83 0.0018 27.5 3.2 69 12-82 288-363 (390)
303 cd01715 ETF_alpha The electron 24.9 1.4E+02 0.0031 22.5 4.3 51 33-84 65-117 (168)
304 COG0331 FabD (acyl-carrier-pro 24.1 91 0.002 26.6 3.3 21 52-72 84-104 (310)
305 cd07221 Pat_PNPLA3 Patatin-lik 24.0 1.2E+02 0.0027 24.9 4.0 27 54-80 33-60 (252)
306 cd07211 Pat_PNPLA8 Patatin-lik 23.8 1E+02 0.0022 26.1 3.5 16 57-72 45-60 (308)
307 cd07220 Pat_PNPLA2 Patatin-lik 23.5 1.2E+02 0.0026 25.0 3.8 22 54-75 37-58 (249)
308 PF12740 Chlorophyllase2: Chlo 23.4 1.2E+02 0.0026 25.1 3.8 49 183-231 152-211 (259)
309 PF09994 DUF2235: Uncharacteri 23.4 2.8E+02 0.006 23.1 6.1 40 34-73 71-112 (277)
310 PF10503 Esterase_phd: Esteras 22.6 78 0.0017 25.5 2.5 21 186-206 170-190 (220)
311 cd01819 Patatin_and_cPLA2 Pata 22.0 1.5E+02 0.0033 22.1 3.9 24 48-71 21-46 (155)
312 PF15566 Imm18: Immunity prote 21.7 1.2E+02 0.0025 18.3 2.5 30 36-65 4-33 (52)
313 PLN02752 [acyl-carrier protein 21.7 93 0.002 26.7 3.0 17 56-72 127-143 (343)
314 PF03283 PAE: Pectinacetyleste 20.5 1.8E+02 0.0038 25.5 4.4 37 52-88 155-195 (361)
315 PRK13512 coenzyme A disulfide 20.4 1.5E+02 0.0033 26.4 4.2 42 42-86 138-179 (438)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.5e-38 Score=264.91 Aligned_cols=244 Identities=77% Similarity=1.352 Sum_probs=168.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+++........|+++++++|+.+++++++.++++|+||||||+|++.+|+.+|++|+++
T Consensus 51 ~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 130 (294)
T PLN02824 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGV 130 (294)
T ss_pred HHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEE
Confidence 36788999999999999998764221100135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++..........+...++....+...+........++........+...+...+.+...++++.++.+..+......
T Consensus 131 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 131 MLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred EEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchH
Confidence 99997643221111111111222222222222222223333333333344444444444445566666665554444433
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
...+..+..+.......+.+.+|+||||+|+|++|.++|.+.++.+.+.++++++++++++||++++|+|++|++.|.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 211 VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 44444433322222223557899999999999999999998888788878888999999999999999999999999999
Q ss_pred HHhc
Q 024900 242 VTRH 245 (261)
Q Consensus 242 l~~~ 245 (261)
++++
T Consensus 291 l~~~ 294 (294)
T PLN02824 291 VARH 294 (294)
T ss_pred HhcC
Confidence 9764
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.2e-33 Score=240.79 Aligned_cols=238 Identities=35% Similarity=0.635 Sum_probs=153.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh-Ccccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+++.. ..|+++++++++.+++++++.++++||||||||.+++.+|+. +|++|++
T Consensus 110 ~L~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~ 183 (360)
T PLN02679 110 VLAKNYTVYAIDLLGFGASDKPPG------FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRG 183 (360)
T ss_pred HHhcCCEEEEECCCCCCCCCCCCC------ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCE
Confidence 367889999999999999987531 248999999999999999999999999999999999999985 7999999
Q ss_pred eEEeecchhhhhhccC-CCCCc---hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 81 MILLNISLRMLHIKKQ-PWYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+|++++.......... .+... +....+............++........++.++...+.+...++++..+.+..+.
T Consensus 184 LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PLN02679 184 LVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA 263 (360)
T ss_pred EEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc
Confidence 9999975322100000 00000 0000000111111111112222222233333333333333445566655543332
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh--h---hhhccCCCCccEEEcCCCCCCCCCCCh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL--G---RAYGNFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~--~---~~~~~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
........+..+............+.+|++|||+|+|++|.++|++. . +.+.+..+++++++|+++||++++|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 264 DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH
Confidence 22333333333221111111124578899999999999999988763 1 235555678999999999999999999
Q ss_pred hhHHHHHHHHHHhc
Q 024900 232 HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ~~~~~~l~~fl~~~ 245 (261)
++|++.|.+|+++.
T Consensus 344 e~~~~~I~~FL~~~ 357 (360)
T PLN02679 344 DLVHEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999763
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.7e-32 Score=226.46 Aligned_cols=231 Identities=18% Similarity=0.243 Sum_probs=141.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|++.|+||++|+||||.|+++. ..|++.++++|+.+++++++.++++++||||||.||+.+|..+|++|++|
T Consensus 49 ~L~~~~~via~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 121 (295)
T PRK03592 49 HLAGLGRCLAPDLIGMGASDKPD-------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGI 121 (295)
T ss_pred HHhhCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEE
Confidence 36778899999999999998763 24899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++......... . .... ..+...+.....+.... .........++...+ ...++++.+..+.........
T Consensus 122 il~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 193 (295)
T PRK03592 122 AFMEAIVRPMTWDD--F-PPAV-RELFQALRSPGEGEEMV--LEENVFIERVLPGSI--LRPLSDEEMAVYRRPFPTPES 193 (295)
T ss_pred EEECCCCCCcchhh--c-chhH-HHHHHHHhCcccccccc--cchhhHHhhcccCcc--cccCCHHHHHHHHhhcCCchh
Confidence 99997432111000 0 0000 01111111110000000 000000010000000 112333333332221111111
Q ss_pred HHHHHHHHhhcC-----------CCCccccCCCCCCCEEEEecCCCCCCCc-hhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 162 ADVFLEFICYSG-----------GPLPEELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 162 ~~~~~~~~~~~~-----------~~~~~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
......+..... .......+.+|+||||+|+|++|.++++ ...+.+.+..+++++++++++||++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 273 (295)
T PRK03592 194 RRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQED 273 (295)
T ss_pred hhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhc
Confidence 111111100000 0001234678999999999999999844 4444455567789999999999999999
Q ss_pred ChhhHHHHHHHHHHhcCC
Q 024900 230 APHLVNPLVESFVTRHAT 247 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~~~ 247 (261)
+|++|++.|.+|+++..+
T Consensus 274 ~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 274 SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 999999999999986443
No 4
>PLN02578 hydrolase
Probab=99.98 E-value=9.8e-31 Score=225.67 Aligned_cols=233 Identities=30% Similarity=0.571 Sum_probs=151.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++. ..|+...+++|+.++++.+..++++++||||||.|++.+|..+|++|+++
T Consensus 108 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 108 ELAKKYKVYALDLLGFGWSDKAL-------IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred HHhcCCEEEEECCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 36788999999999999998763 34899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccC-CCC---Cchh-----hHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 82 ILLNISLRMLHIKKQ-PWY---GRPL-----IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 82 v~~~~~~~~~~~~~~-~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
|+++++......... ... .... ...+........ ....+.....+......+...+.+....++...+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVV-LGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESI 259 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHH
Confidence 999875432111000 000 0000 011111110000 000001111222222222223333333444444444
Q ss_pred hccCCCCchHHHHHHHHh-hc---CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGLETGAADVFLEFIC-YS---GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
..+.........+..... +. ......+.+++++|||++|+|++|.++|.+.++.+.+..++++++++ ++||++|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~ 338 (354)
T PLN02578 260 TEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHD 338 (354)
T ss_pred HhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccc
Confidence 333333333333333221 11 11112345789999999999999999998887778877788999999 68999999
Q ss_pred CChhhHHHHHHHHHH
Q 024900 229 EAPHLVNPLVESFVT 243 (261)
Q Consensus 229 e~p~~~~~~l~~fl~ 243 (261)
|+|++|++.|.+|++
T Consensus 339 e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 339 EVPEQVNKALLEWLS 353 (354)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999999985
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.98 E-value=1.9e-31 Score=222.68 Aligned_cols=222 Identities=20% Similarity=0.246 Sum_probs=141.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||+|+.+. ..|+++++++|+.++++.++.++++||||||||+|++.+|..+|++|++|
T Consensus 47 ~L~~~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~l 119 (276)
T TIGR02240 47 ALDPDLEVIAFDVPGVGGSSTPR-------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKL 119 (276)
T ss_pred HhccCceEEEECCCCCCCCCCCC-------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhhe
Confidence 47789999999999999998642 34799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|+++++...... + ... ..... .... ..+........... ..+.......++.+............
T Consensus 120 vl~~~~~~~~~~---~--~~~--~~~~~-~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (276)
T TIGR02240 120 ILAATAAGAVMV---P--GKP--KVLMM-MASP---RRYIQPSHGIHIAP----DIYGGAFRRDPELAMAHASKVRSGGK 184 (276)
T ss_pred EEeccCCccccC---C--Cch--hHHHH-hcCc---hhhhccccccchhh----hhccceeeccchhhhhhhhhcccCCC
Confidence 999986532100 0 000 00000 0000 00000000000000 00100000011111111110000011
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
...+........ ....+.+++|+||||+|+|++|+++|++..+.+.+..++++++++++ ||++++|+|++|++.|.+|
T Consensus 185 ~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 185 LGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKF 262 (276)
T ss_pred chHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHH
Confidence 111111111111 11124478999999999999999999988877777778899999975 9999999999999999999
Q ss_pred HHhcCC
Q 024900 242 VTRHAT 247 (261)
Q Consensus 242 l~~~~~ 247 (261)
+++..+
T Consensus 263 l~~~~~ 268 (276)
T TIGR02240 263 LAEERQ 268 (276)
T ss_pred HHHhhh
Confidence 987543
No 6
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=7.6e-31 Score=216.60 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=137.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++. ++++||||||||.|++.+|..+|++|+++|
T Consensus 28 ~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 101 (255)
T PLN02965 28 AAGFKSTCVDLTGAGISLTDSN------TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAI 101 (255)
T ss_pred hCCceEEEecCCcCCCCCCCcc------ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEE
Confidence 5679999999999999975421 347899999999999999987 499999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhh-hhhHHHHHh-hcCh---HHH-HHHHHhhcCCCCCCcHH-HHHHHhcc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-AAGKLFYKM-VATS---ESV-RNILCQCYNDTSQVTEE-LVEKILQP 155 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (261)
++++.....+.. . . ..+....... ......+.. ...+ ... .......+......... .....+.+
T Consensus 102 l~~~~~~~~~~~---~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (255)
T PLN02965 102 YVAAAMVKPGSI---I--S---PRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRP 173 (255)
T ss_pred EEccccCCCCCC---c--c---HHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCC
Confidence 999753211000 0 0 0000000000 000000000 0000 000 00110111111111100 00111111
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
. ....+... . .....+..+++|+++|+|++|..+|++..+.+.+..++++++++++|||++++|+|++|+
T Consensus 174 ~----~~~~~~~~---~---~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~ 243 (255)
T PLN02965 174 A----PVRAFQDL---D---KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLF 243 (255)
T ss_pred C----CCcchhhh---h---hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHH
Confidence 0 00000000 0 012245679999999999999999999888888888889999999999999999999999
Q ss_pred HHHHHHHHhc
Q 024900 236 PLVESFVTRH 245 (261)
Q Consensus 236 ~~l~~fl~~~ 245 (261)
+.|.+|+++.
T Consensus 244 ~~l~~~~~~~ 253 (255)
T PLN02965 244 QYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 7
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=4.9e-30 Score=211.76 Aligned_cols=219 Identities=18% Similarity=0.179 Sum_probs=134.2
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+ ..++++++++++.+ ++.+++++|||||||.+++.+|..+|++|+++
T Consensus 35 ~L~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 102 (256)
T PRK10349 35 ELSSHFTLHLVDLPGFGRSRGF--------GALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQAL 102 (256)
T ss_pred HHhcCCEEEEecCCCCCCCCCC--------CCCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheE
Confidence 3678899999999999999753 23688888777653 56789999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHH--HHHhccCCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV--EKILQPGLET 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 159 (261)
|++++.+........+.........+...+.... ......++............+.. ..........
T Consensus 103 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T PRK10349 103 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDF-----------QRTVERFLALQTMGTETARQDARALKKTVLALPMP 171 (256)
T ss_pred EEecCccceecCCCCCcccHHHHHHHHHHHHhch-----------HHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCC
Confidence 9998754431111111000011111111110000 00011111100000000111111 0001110001
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
........+..+...+ ..+.++++++|||+|+|++|.++|.+.++.+.+..+++++++|+++||++++|+|++|++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 172 EVDVLNGGLEILKTVD-LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cHHHHHHHHHHHHhCc-cHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 1100000011111111 234578999999999999999999988888888888899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|-++
T Consensus 251 ~~~~~ 255 (256)
T PRK10349 251 ALKQR 255 (256)
T ss_pred HHhcc
Confidence 99654
No 8
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=2.3e-30 Score=211.82 Aligned_cols=235 Identities=23% Similarity=0.314 Sum_probs=143.4
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+.. |||+|+|+||||.|+.|.. ...||+..++.|+..+++.|+.++++++||+||++||+.+|+.+|++|+++
T Consensus 67 la~~~~rviA~DlrGyG~Sd~P~~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~l 141 (322)
T KOG4178|consen 67 LASRGYRVIAPDLRGYGFSDAPPH-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGL 141 (322)
T ss_pred hhhcceEEEecCCCCCCCCCCCCC-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceE
Confidence 4444 9999999999999998753 257999999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHH-hhhhhhhHHHHHhhcChHHHHHHHHhhcC---------C--CCCCcHHHH
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNL-LRNTAAGKLFYKMVATSESVRNILCQCYN---------D--TSQVTEELV 149 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~ 149 (261)
|+++.+......+........+.+.+... .+.....+..+....++.....+....-. + ...++++.+
T Consensus 142 v~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi 221 (322)
T KOG4178|consen 142 VTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDI 221 (322)
T ss_pred EEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHH
Confidence 99997654110000000000000000000 00000000000001111111111100000 0 011334444
Q ss_pred HHHhccCCCCch----HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCc-cEEEcCCCC
Q 024900 150 EKILQPGLETGA----ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVE-DFIVLPNVG 223 (261)
Q Consensus 150 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~-~~~~i~~~g 223 (261)
+-+...+ +.+. ...+..+.... ......++.|++||++|+|+.|.+.+.. ..+.+++..++. +.++++++|
T Consensus 222 ~~~~~~f-~~~g~~gplNyyrn~~r~w--~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~g 298 (322)
T KOG4178|consen 222 AFYVSKF-QIDGFTGPLNYYRNFRRNW--EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIG 298 (322)
T ss_pred HHHHhcc-ccccccccchhhHHHhhCc--hhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCc
Confidence 3332222 2111 12222221110 0112357889999999999999987766 344566665544 778999999
Q ss_pred CCCCCCChhhHHHHHHHHHHhc
Q 024900 224 HCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|+++.|+|+++++++.+|+++.
T Consensus 299 H~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 299 HFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccCHHHHHHHHHHHHHhh
Confidence 9999999999999999999874
No 9
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=1.5e-29 Score=208.45 Aligned_cols=212 Identities=18% Similarity=0.268 Sum_probs=139.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++|+||||||.+++.+|..+|++|+++
T Consensus 38 ~l~~~~~vi~~D~~G~G~s~~~--------~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~l 109 (255)
T PRK10673 38 DLVNDHDIIQVDMRNHGLSPRD--------PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_pred HHhhCCeEEEECCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceE
Confidence 3678899999999999999864 24799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc-
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG- 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (261)
|++++++..... .........+...... ...........+.... .++....+.....+..
T Consensus 110 vli~~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 170 (255)
T PRK10673 110 VAIDIAPVDYHV----RRHDEIFAAINAVSEA---------GATTRQQAAAIMRQHL------NEEGVIQFLLKSFVDGE 170 (255)
T ss_pred EEEecCCCCccc----hhhHHHHHHHHHhhhc---------ccccHHHHHHHHHHhc------CCHHHHHHHHhcCCcce
Confidence 999865322100 0000011111100000 0000111111111111 0011111111101000
Q ss_pred ---hHHHHHH-HHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 161 ---AADVFLE-FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 161 ---~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
....... +.... ..+.++.+++|+|+|+|++|.+++.+..+.+.+..+++++.+++++||++++|+|+++++
T Consensus 171 ~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 171 WRFNVPVLWDQYPHIV----GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred eEeeHHHHHHhHHHHh----CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHH
Confidence 0011101 11111 123467889999999999999999888888887788899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|..|+++
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999975
No 10
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=2.3e-29 Score=217.64 Aligned_cols=235 Identities=19% Similarity=0.205 Sum_probs=137.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhcCCCeE-EEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-CKDVVKDQAF-FICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
++++|+||++|+||||.|+.+..........|+++++++++.++ ++++++++++ |+||||||+||+.+|+++|++|++
T Consensus 102 ~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 102 DASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred cccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 37889999999999999986531100001248999999998885 4889999986 899999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHH------------H-hhcCCCCCCcHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNIL------------C-QCYNDTSQVTEE 147 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~ 147 (261)
+|++++.+...... .+ ................. .......+....... . ............
T Consensus 182 LVLi~s~~~~~~~~--~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T PRK06489 182 LMPMASQPTEMSGR--NW---MWRRMLIESIRNDPAWN-NGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADK 255 (360)
T ss_pred eeeeccCcccccHH--HH---HHHHHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHH
Confidence 99998753211000 00 00000000000000000 000000000000000 0 000000000111
Q ss_pred HHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh--hhhccCCCCccEEEcCCC---
Q 024900 148 LVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNV--- 222 (261)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~--- 222 (261)
.++.......... ...+.............+.+.+|+||||+|+|++|.++|++.+ +.+.+..|++++++|++|
T Consensus 256 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~ 334 (360)
T PRK06489 256 LVDERLAAPVTAD-ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPET 334 (360)
T ss_pred HHHHHHHhhhhcC-HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCC
Confidence 2222221111111 1111111111111112356889999999999999999998865 567777888999999996
Q ss_pred -CCCCCCCChhhHHHHHHHHHHhc
Q 024900 223 -GHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 223 -gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
||+++ |+|++|++.|.+|+++.
T Consensus 335 ~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 335 RGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCcccc-cCHHHHHHHHHHHHHhc
Confidence 99998 89999999999999865
No 11
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.9e-30 Score=217.77 Aligned_cols=232 Identities=29% Similarity=0.422 Sum_probs=142.6
Q ss_pred CcCCC--CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 2 VLAKS--HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 2 ~L~~~--~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.|++. ++|+++|++|||.|+..+. ...|+..++++.+..++...+.++++++|||+||.+|+.+|+.+|+.|+
T Consensus 80 ~L~~~~~~~v~aiDl~G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~ 154 (326)
T KOG1454|consen 80 LLSKAKGLRVLAIDLPGHGYSSPLPR-----GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVD 154 (326)
T ss_pred ccccccceEEEEEecCCCCcCCCCCC-----CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccccc
Confidence 35666 9999999999996554321 1459999999999999999999999999999999999999999999999
Q ss_pred ceEEee---cchhhhhhccCCCCCchhhHHHHHHhhhhhhh---HHHHH-hhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 80 GMILLN---ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG---KLFYK-MVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 80 ~lv~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
+||+++ +..... +.........+...+...... ..... ..... .+...+...+.+ .....+....+
T Consensus 155 ~lv~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 227 (326)
T KOG1454|consen 155 SLVLLDLLGPPVYST-----PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSE-GLLRCLKVVYTD-PSRLLEKLLHL 227 (326)
T ss_pred ceeeecccccccccC-----CcchhHHHHhhhhhccHhhhcCccccccchhheeH-hhhcceeeeccc-cccchhhhhhh
Confidence 999555 322211 000000001111111100000 00000 00000 000011111111 11222222222
Q ss_pred hccCC-CCchHHHHHHHHhhcCC--CCccccCCCCC-CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGL-ETGAADVFLEFICYSGG--PLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
+.+.. .....+.+.++...... ......+.+|. ||||||||++|+++|.+.+..+.+..|++++.+|++|||++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~ 307 (326)
T KOG1454|consen 228 LSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHL 307 (326)
T ss_pred eecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCccccc
Confidence 22211 11122222222222111 11123456776 9999999999999999988777776699999999999999999
Q ss_pred CChhhHHHHHHHHHHhc
Q 024900 229 EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~ 245 (261)
|.|++|+++|..|+..+
T Consensus 308 e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 308 ERPEEVAALLRSFIARL 324 (326)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999999875
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=4.5e-29 Score=208.58 Aligned_cols=221 Identities=21% Similarity=0.201 Sum_probs=135.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
..+|+|+++|+||||.|+.+... ..++. .+++|+.++++.++.++++++||||||.+++.+|..+|++|+++|+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~~-----~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 131 (282)
T TIGR03343 58 DAGYRVILKDSPGFNKSDAVVMD-----EQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLIL 131 (282)
T ss_pred hCCCEEEEECCCCCCCCCCCcCc-----ccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEE
Confidence 45799999999999999864211 11222 5688999999999999999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC-CchH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-TGAA 162 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 162 (261)
+++....... ..+.. ......+...+... ........+.....+....+++..+..+..... ....
T Consensus 132 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (282)
T TIGR03343 132 MGPGGLGPSL-FAPMP-MEGIKLLFKLYAEP-----------SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHL 198 (282)
T ss_pred ECCCCCCccc-cccCc-hHHHHHHHHHhcCC-----------CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHH
Confidence 9875221000 00000 00001111111000 000011111111111112222222211110000 0000
Q ss_pred HHHHHHHhhcC--CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 163 DVFLEFICYSG--GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 163 ~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
..+........ .....+.+++|+||||+|+|++|.+++++.++.+.+..+++++++++++||++++|+|++|+++|.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 199 KNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred HHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 11110000000 0001234788999999999999999998888777777788999999999999999999999999999
Q ss_pred HHH
Q 024900 241 FVT 243 (261)
Q Consensus 241 fl~ 243 (261)
|++
T Consensus 279 fl~ 281 (282)
T TIGR03343 279 FLR 281 (282)
T ss_pred Hhh
Confidence 985
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2e-29 Score=213.17 Aligned_cols=216 Identities=20% Similarity=0.288 Sum_probs=134.0
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+ ++|+|+++|+||||+|+++.. ...|+++++++|+.+++++++.++++|+||||||.+|+.+|..+|++|+++
T Consensus 69 L~~~gy~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 143 (302)
T PRK00870 69 LAAAGHRVIAPDLIGFGRSDKPTR-----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARL 143 (302)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEE
Confidence 55 479999999999999986531 135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhh---hhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++...... ......+ ..+.......+ ... ++.... ....+++....+..+...
T Consensus 144 vl~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~~~~~~~ 202 (302)
T PRK00870 144 VVANTGLPTGD----GPMPDAF-WAWRAFSQYSPVLPVGR-LVNGGT---------------VRDLSDAVRAAYDAPFPD 202 (302)
T ss_pred EEeCCCCCCcc----ccchHHH-hhhhcccccCchhhHHH-Hhhccc---------------cccCCHHHHHHhhcccCC
Confidence 99986421100 0000000 00000000000 000 000000 000111111111000000
Q ss_pred C---chHHHHHHHHhhcC-------CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc---EEEcCCCCCC
Q 024900 159 T---GAADVFLEFICYSG-------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED---FIVLPNVGHC 225 (261)
Q Consensus 159 ~---~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~ 225 (261)
. .....+..+..... .......+.+++|||++|+|++|.++|.+. +.+.+..++++ +.+++++||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~ 281 (302)
T PRK00870 203 ESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHF 281 (302)
T ss_pred hhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCcc
Confidence 0 00000000000000 000013467899999999999999998765 66776666665 8899999999
Q ss_pred CCCCChhhHHHHHHHHHHhc
Q 024900 226 PQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~ 245 (261)
+++|+|++|++.|.+|++++
T Consensus 282 ~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 282 LQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred chhhChHHHHHHHHHHHhcC
Confidence 99999999999999999765
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=1.4e-28 Score=206.35 Aligned_cols=221 Identities=18% Similarity=0.237 Sum_probs=134.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+++.. ..|+++++++++.+++++++.++++++||||||.|++.+|+.+|++|+++|
T Consensus 57 l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv 130 (286)
T PRK03204 57 LRDRFRCVAPDYLGFGLSERPSG------FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVV 130 (286)
T ss_pred HhCCcEEEEECCCCCCCCCCCCc------cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEE
Confidence 67789999999999999986531 247899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++..... ... ....+.............+. ......+++... .....+++....+..........
T Consensus 131 l~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 197 (286)
T PRK03204 131 LGNTWFWPA-------DTL-AMKAFSRVMSSPPVQYAILR---RNFFVERLIPAG--TEHRPSSAVMAHYRAVQPNAAAR 197 (286)
T ss_pred EECccccCC-------Cch-hHHHHHHHhccccchhhhhh---hhHHHHHhcccc--ccCCCCHHHHHHhcCCCCCHHHH
Confidence 987643110 000 00001110100000000000 000001111000 01122333332222111111111
Q ss_pred HHHHHHH-hhcC-CCCc---cccCC--CCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 163 DVFLEFI-CYSG-GPLP---EELLP--QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 163 ~~~~~~~-~~~~-~~~~---~~~l~--~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
.....+. .+.. .... ...+. .+++||++|+|++|.++++. ..+.+.+..|+.++++|+++||++++|+|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~ 277 (286)
T PRK03204 198 RGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRI 277 (286)
T ss_pred HHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHH
Confidence 1110000 0000 0000 00111 13899999999999987554 45667777888999999999999999999999
Q ss_pred HHHHHHHH
Q 024900 235 NPLVESFV 242 (261)
Q Consensus 235 ~~~l~~fl 242 (261)
++.|.+|+
T Consensus 278 ~~~i~~~~ 285 (286)
T PRK03204 278 AAAIIERF 285 (286)
T ss_pred HHHHHHhc
Confidence 99999997
No 15
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=8.5e-29 Score=212.57 Aligned_cols=231 Identities=10% Similarity=0.074 Sum_probs=134.4
Q ss_pred CcC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHH----HHHHhcCCC-eEEEEcChhHHHHHHH
Q 024900 2 VLA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFET-----WASQLND----FCKDVVKDQ-AFFICNSIGGLVGLQA 70 (261)
Q Consensus 2 ~L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~-----~a~dl~~----~~~~l~~~~-~~lvGhS~Gg~va~~~ 70 (261)
.|. ++|+||++|+||||.|+.+... ...|++++ +++|+.+ ++++|++++ ++||||||||+||+++
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~ 141 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNT----PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHW 141 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCC----CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHH
Confidence 354 6899999999999999865311 01234332 4556654 667899999 5899999999999999
Q ss_pred HhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh--------------h---hHHHHHhhcChHHHHHH
Q 024900 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA--------------A---GKLFYKMVATSESVRNI 133 (261)
Q Consensus 71 a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~~~~~~~~~~~ 133 (261)
|++||++|++||++++........ ..+.+.....+.... . ...+......+...+..
T Consensus 142 a~~~P~~V~~Lvli~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (339)
T PRK07581 142 AVRYPDMVERAAPIAGTAKTTPHN------FVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQE 215 (339)
T ss_pred HHHCHHHHhhheeeecCCCCCHHH------HHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhh
Confidence 999999999999998754321000 000000000000000 0 00000000000000000
Q ss_pred HHhhcCCCC-CCcHHHHHHHhccC---CCCchHHHHH-HHHhh--cCC----CCccccCCCCCCCEEEEecCCCCCCCch
Q 024900 134 LCQCYNDTS-QVTEELVEKILQPG---LETGAADVFL-EFICY--SGG----PLPEELLPQVKCPVLIAWGDKDPWEPIE 202 (261)
Q Consensus 134 ~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~--~~~----~~~~~~l~~i~~Pvlii~G~~D~~~~~~ 202 (261)
.+.... ...++.+....... .......... .+... ... ....+.+++|+||||+|+|++|.++|++
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~ 292 (339)
T PRK07581 216 ---LWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPE 292 (339)
T ss_pred ---hccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHH
Confidence 000000 00012221111110 0111111110 01100 000 0113457889999999999999999988
Q ss_pred hhhhhccCCCCccEEEcCC-CCCCCCCCChhhHHHHHHHHHHhc
Q 024900 203 LGRAYGNFDSVEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++.+.+.+++++++++++ +||++++|+|+.+++.|++||++.
T Consensus 293 ~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 293 DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 8777777778899999999 999999999999999999999875
No 16
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.1e-28 Score=210.34 Aligned_cols=226 Identities=15% Similarity=0.138 Sum_probs=134.1
Q ss_pred c-CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCe-EEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L-~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
| +++|+||++|+||||.|.. ..|++.++++|+.+++++++++++ +||||||||+||+++|.++|++|++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~~---------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSLD---------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cCccccEEEEEeCCCCCCCCC---------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 5 5789999999999998842 236889999999999999999775 7999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHh--h-h---hh----hhHHH-HHhhcChHHHHHHHHhhcCC-CCCCc---
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLL--R-N---TA----AGKLF-YKMVATSESVRNILCQCYND-TSQVT--- 145 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~---~~----~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~--- 145 (261)
||++++..... +. ............ . . .. ....+ +......+.....+...... .....
T Consensus 166 LvLi~s~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T PRK08775 166 LVVVSGAHRAH-----PY-AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAA 239 (343)
T ss_pred EEEECccccCC-----HH-HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchH
Confidence 99999754211 00 000000000000 0 0 00 00000 00001111111111000000 00000
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCC-CC
Q 024900 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPN-VG 223 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~-~g 223 (261)
..++...............+..+.... ......+.+|++|||+|+|++|..+|++..+.+.+ +.+++++++|++ +|
T Consensus 240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aG 317 (343)
T PRK08775 240 EDYLDAAGAQYVARTPVNAYLRLSESI--DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYG 317 (343)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH--hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCcc
Confidence 111111000000000001111111000 01122367899999999999999999876666555 457899999985 99
Q ss_pred CCCCCCChhhHHHHHHHHHHhc
Q 024900 224 HCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|++++|+|++|++.|.+||++.
T Consensus 318 H~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 318 HDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred HHHHhcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999764
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.96 E-value=3.7e-28 Score=202.15 Aligned_cols=227 Identities=19% Similarity=0.184 Sum_probs=139.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++|+||||||.+++.+|..+|++++++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 123 (278)
T TIGR03056 50 PLARSFRVVAPDLPGHGFTRAPFR------FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMV 123 (278)
T ss_pred HHhhCcEEEeecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceE
Confidence 467889999999999999986531 25799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhh-cChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV-ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
|++++......... .+. .+... ................ .........+... ....++.....+........
T Consensus 124 v~~~~~~~~~~~~~-~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 195 (278)
T TIGR03056 124 VGINAALMPFEGMA-GTL-FPYMA---RVLACNPFTPPMMSRGAADQQRVERLIRDT---GSLLDKAGMTYYGRLIRSPA 195 (278)
T ss_pred EEEcCccccccccc-ccc-cchhh---HhhhhcccchHHHHhhcccCcchhHHhhcc---ccccccchhhHHHHhhcCch
Confidence 99987543210000 000 00000 0000000000000000 0000011111000 00011111111100000000
Q ss_pred hHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 161 AADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
......... .+... .....+++|++|+++|+|++|..+|.+..+.+.+..++++++.++++||++++|+|+++++.|.
T Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 196 HVDGALSMMAQWDLA-PLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred hhhHHHHHhhccccc-chhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 001111111 01000 1123467899999999999999999887777777777889999999999999999999999999
Q ss_pred HHHH
Q 024900 240 SFVT 243 (261)
Q Consensus 240 ~fl~ 243 (261)
+|++
T Consensus 275 ~f~~ 278 (278)
T TIGR03056 275 QAAE 278 (278)
T ss_pred HHhC
Confidence 9984
No 18
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=5.9e-28 Score=197.43 Aligned_cols=211 Identities=14% Similarity=0.142 Sum_probs=125.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc-ccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI-CRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lv~ 83 (261)
++|+|+++|+||||.|+++. ..+++.+++|+.+++++++.++++++||||||.+|+.+|..+|+. |+++|+
T Consensus 26 ~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl 97 (242)
T PRK11126 26 PDYPRLYIDLPGHGGSAAIS--------VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIV 97 (242)
T ss_pred CCCCEEEecCCCCCCCCCcc--------ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEE
Confidence 36999999999999998653 248999999999999999999999999999999999999999664 999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++.+..... . .............. .+............+.. .+. ...++....+.........
T Consensus 98 ~~~~~~~~~~--------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 162 (242)
T PRK11126 98 EGGNPGLQNA--------E--ERQARWQNDRQWAQ-RFRQEPLEQVLADWYQQPVFA---SLNAEQRQQLVAKRSNNNG- 162 (242)
T ss_pred eCCCCCCCCH--------H--HHHHHHhhhHHHHH-HhccCcHHHHHHHHHhcchhh---ccCccHHHHHHHhcccCCH-
Confidence 8765322100 0 00000000000000 00000000111111100 000 0111111111111000000
Q ss_pred HHHHHHHh-h--cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 163 DVFLEFIC-Y--SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 163 ~~~~~~~~-~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.....+.. . .......+.+.+++|||++|+|++|..+. ..+. . .+++++++++|||++++|+|++|++.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~----~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 236 (242)
T PRK11126 163 AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-ALAQ----Q-LALPLHVIPNAGHNAHRENPAAFAASLA 236 (242)
T ss_pred HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-HHHH----H-hcCeEEEeCCCCCchhhhChHHHHHHHH
Confidence 11111111 1 01111124578899999999999998543 2221 1 2589999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|+++
T Consensus 237 ~fl~~ 241 (242)
T PRK11126 237 QILRL 241 (242)
T ss_pred HHHhh
Confidence 99975
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=4.8e-28 Score=213.41 Aligned_cols=227 Identities=19% Similarity=0.283 Sum_probs=136.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN-DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~-~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
++|+|+++|+||||+|+++.. ..|+++++++++. .+++.++.++++++||||||.|++.+|.++|++|++||+
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~~------~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPAD------SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCEEEEECCCCCCCCcCCCC------CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEE
Confidence 689999999999999987531 3589999999995 889999999999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHh-hh--hh--hh---HHHHHhhcC--------hHHHHHHHHhhcCCCCCCcHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLL-RN--TA--AG---KLFYKMVAT--------SESVRNILCQCYNDTSQVTEE 147 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 147 (261)
++++..... .............. .. .. .+ ..++..... .......+...... ......
T Consensus 305 i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 378 (481)
T PLN03087 305 LAPPYYPVP-----KGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR-NRMRTF 378 (481)
T ss_pred ECCCccccc-----cchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh-hhhhHH
Confidence 987532210 00000000000000 00 00 00 000000000 00000000000000 000000
Q ss_pred HHHHHhccCCCCchHHHHHHHHhhcCC---CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCC
Q 024900 148 LVEKILQPGLETGAADVFLEFICYSGG---PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224 (261)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH 224 (261)
..+.+... ...........+...... ......+.+|++|||+|+|++|.++|++.++.+.+..|++++++|+++||
T Consensus 379 l~~~~~~~-~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH 457 (481)
T PLN03087 379 LIEGFFCH-THNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDH 457 (481)
T ss_pred HHHHHHhc-cchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 11111000 000000011111110000 00012234789999999999999999999888888788899999999999
Q ss_pred CCCC-CChhhHHHHHHHHHHh
Q 024900 225 CPQD-EAPHLVNPLVESFVTR 244 (261)
Q Consensus 225 ~~~~-e~p~~~~~~l~~fl~~ 244 (261)
++++ |+|++|++.|.+|+..
T Consensus 458 ~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 458 ITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred cchhhcCHHHHHHHHHHHhhc
Confidence 9996 9999999999999965
No 20
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=2.8e-27 Score=204.53 Aligned_cols=226 Identities=22% Similarity=0.386 Sum_probs=139.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++... ....|+++++++++.+++++++.++++|+||||||.|++.+|..+|++|+++
T Consensus 149 ~L~~~~~Via~DlpG~G~S~~p~~~---~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~l 225 (383)
T PLN03084 149 VLSKNYHAIAFDWLGFGFSDKPQPG---YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKL 225 (383)
T ss_pred HHhcCCEEEEECCCCCCCCCCCccc---ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEE
Confidence 3678899999999999999876421 0125899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|+++++..... ...+ .. ...+...+ ....+ ...... .....+.. . .....+++....+..+....+.
T Consensus 226 ILi~~~~~~~~-~~~p---~~-l~~~~~~l----~~~~~-~~~~~~-~~~~~~~~-~-~~~~~~~e~~~~~~~~~~~~~~ 292 (383)
T PLN03084 226 ILLNPPLTKEH-AKLP---ST-LSEFSNFL----LGEIF-SQDPLR-ASDKALTS-C-GPYAMKEDDAMVYRRPYLTSGS 292 (383)
T ss_pred EEECCCCcccc-ccch---HH-HHHHHHHH----hhhhh-hcchHH-HHhhhhcc-c-CccCCCHHHHHHHhccccCCcc
Confidence 99997642110 0000 00 00010000 00000 000000 00000000 0 0111233333333222222211
Q ss_pred HHH-HHHHH-hhcCC--CC---ccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 162 ADV-FLEFI-CYSGG--PL---PEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 162 ~~~-~~~~~-~~~~~--~~---~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
... ...+. .+... .. ....+ ..|++|||+|||++|.+++.+..+.+.+.. ++++++|++|||++++|+|+
T Consensus 293 ~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~a~l~vIp~aGH~~~~E~Pe 371 (383)
T PLN03084 293 SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS-QHKLIELPMAGHHVQEDCGE 371 (383)
T ss_pred hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-CCeEEEECCCCCCcchhCHH
Confidence 111 00010 01000 00 00111 468999999999999999988776666653 68999999999999999999
Q ss_pred hHHHHHHHHHHh
Q 024900 233 LVNPLVESFVTR 244 (261)
Q Consensus 233 ~~~~~l~~fl~~ 244 (261)
+++++|.+|+.+
T Consensus 372 ~v~~~I~~Fl~~ 383 (383)
T PLN03084 372 ELGGIISGILSK 383 (383)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=4e-27 Score=191.28 Aligned_cols=216 Identities=17% Similarity=0.214 Sum_probs=131.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.. ..++++++++++.+.+ .++++++||||||.+++.+|..+|++|.++
T Consensus 26 ~l~~~~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 93 (245)
T TIGR01738 26 ELSAHFTLHLVDLPGHGRSRGF--------GPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRAL 93 (245)
T ss_pred hhccCeEEEEecCCcCccCCCC--------CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhhee
Confidence 4678899999999999999753 2368888888776543 479999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCc-hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCC-CCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGR-PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDT-SQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 158 (261)
|++++.+........+.... .....+...+.... ......++.. ..... .......+...+.....
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (245)
T TIGR01738 94 VTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDY-----------QRTIERFLALQTLGTPTARQDARALKQTLLARPT 162 (245)
T ss_pred eEecCCcccccCCcccccCCHHHHHHHHHHhhhhH-----------HHHHHHHHHHHHhcCCccchHHHHHHHHhhccCC
Confidence 99987653321111000000 01111111111000 0000001000 00100 00000111111111111
Q ss_pred CchHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
... ..+.... .... ......+.+|++||++|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|++.
T Consensus 163 ~~~-~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 240 (245)
T TIGR01738 163 PNV-QVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCAL 240 (245)
T ss_pred CCH-HHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHH
Confidence 111 1111111 1111 111234678999999999999999998887777777788999999999999999999999999
Q ss_pred HHHHH
Q 024900 238 VESFV 242 (261)
Q Consensus 238 l~~fl 242 (261)
|.+|+
T Consensus 241 i~~fi 245 (245)
T TIGR01738 241 LVAFK 245 (245)
T ss_pred HHhhC
Confidence 99985
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.95 E-value=1.4e-27 Score=195.72 Aligned_cols=218 Identities=20% Similarity=0.284 Sum_probs=137.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ..|+++++++++.++++.++.++++++||||||.+++.+|+.+|++|+++|
T Consensus 36 l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i 109 (257)
T TIGR03611 36 LTQRFHVVTYDHRGTGRSPGELP------PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLV 109 (257)
T ss_pred HHhccEEEEEcCCCCCCCCCCCc------ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHhe
Confidence 56789999999999999976431 358999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh----hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM----VATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
++++..... +.....+. .....+..... ..+... ......+. . ......+..... ... .
T Consensus 110 ~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~-~~~--~ 172 (257)
T TIGR03611 110 LINAWSRPD-----PHTRRCFD-VRIALLQHAGP-EAYVHAQALFLYPADWIS----E---NAARLAADEAHA-LAH--F 172 (257)
T ss_pred eecCCCCCC-----hhHHHHHH-HHHHHHhccCc-chhhhhhhhhhccccHhh----c---cchhhhhhhhhc-ccc--c
Confidence 998643210 00000000 00011110000 000000 00000000 0 000000000000 000 0
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
.........+........ ...+.++++|+++++|++|.++|.+.++.+.+..++.+++.++++||++++|+|+++++.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 173 PGKANVLRRINALEAFDV-SARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred CccHHHHHHHHHHHcCCc-HHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 000011111111111111 2457789999999999999999998877776666778999999999999999999999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
.+||++
T Consensus 252 ~~fl~~ 257 (257)
T TIGR03611 252 LDFLKT 257 (257)
T ss_pred HHHhcC
Confidence 999863
No 23
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=4.5e-27 Score=202.72 Aligned_cols=234 Identities=17% Similarity=0.183 Sum_probs=136.3
Q ss_pred cCCCCeEEEecCCC--CCCCCCCC----CCCCC-CCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhhC
Q 024900 3 LAKSHRVYSIDLIG--YGYSDKPN----PRDFF-DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 3 L~~~~~V~~~Dl~G--~G~S~~~~----~~~~~-~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~ 74 (261)
++++|+||++|+|| ||.|.... ..... +...|+++++++|+.++++++++++ ++|+||||||+|++.+|+++
T Consensus 69 ~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 69 DTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred CCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 36889999999999 66664321 10000 0124899999999999999999999 99999999999999999999
Q ss_pred cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhh-------------h-----hhHHHHH-hhcChHHHHHHHH
Q 024900 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-------------A-----AGKLFYK-MVATSESVRNILC 135 (261)
Q Consensus 75 p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-----~~~~~~~-~~~~~~~~~~~~~ 135 (261)
|++|+++|++++.+...... ..+........... + ..+.+.. .....+.+...+.
T Consensus 149 p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~ 222 (351)
T TIGR01392 149 PERVRAIVVLATSARHSAWC------IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFG 222 (351)
T ss_pred hHhhheEEEEccCCcCCHHH------HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhC
Confidence 99999999999864321000 00000000000000 0 0000000 0011111111110
Q ss_pred hhcCCC-CC-------Cc-HHHHH----HHhccCCCCchHHHHHHHH-hhcCC---CCccccCCCCCCCEEEEecCCCCC
Q 024900 136 QCYNDT-SQ-------VT-EELVE----KILQPGLETGAADVFLEFI-CYSGG---PLPEELLPQVKCPVLIAWGDKDPW 198 (261)
Q Consensus 136 ~~~~~~-~~-------~~-~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l~~i~~Pvlii~G~~D~~ 198 (261)
...... .. .. +.+.. .+... ............. .+... ....+.+++|++|||+|+|++|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~ 301 (351)
T TIGR01392 223 RAPQSGESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWL 301 (351)
T ss_pred cCcccccccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccc
Confidence 000000 00 00 11110 01110 0011100000011 11000 011356889999999999999999
Q ss_pred CCchhhhhhccCCCCccEE-----EcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 199 EPIELGRAYGNFDSVEDFI-----VLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
+|++..+.+.+.++++++. +++++||++++|+|++|++.|.+||+
T Consensus 302 ~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 302 FPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9998888887777777765 56899999999999999999999984
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.95 E-value=4.7e-27 Score=191.37 Aligned_cols=216 Identities=21% Similarity=0.305 Sum_probs=136.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+. ..+++.++++|+.++++.++.++++++||||||++++.+|..+|++|+++
T Consensus 35 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~l 107 (251)
T TIGR02427 35 ALTPDFRVLRYDKRGHGLSDAPE-------GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRAL 107 (251)
T ss_pred HhhcccEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHH
Confidence 36778999999999999997542 34799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++...... + ..+...+....... ... . ........+...+........+.+...... ...
T Consensus 108 i~~~~~~~~~~----~---~~~~~~~~~~~~~~-~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 170 (251)
T TIGR02427 108 VLSNTAAKIGT----P---ESWNARIAAVRAEG-LAA-----L-ADAVLERWFTPGFREAHPARLDLYRNMLVR---QPP 170 (251)
T ss_pred hhccCccccCc----h---hhHHHHHhhhhhcc-HHH-----H-HHHHHHHHcccccccCChHHHHHHHHHHHh---cCH
Confidence 99986532110 0 00000000000000 000 0 000000000000000000000011111100 000
Q ss_pred HHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 162 ADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
..+.... .... ......+.++++|+++|+|++|..+|.+..+.+.+..++.++++++++||++++|+|+++++.+.+
T Consensus 171 -~~~~~~~~~~~~-~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 171 -DGYAGCCAAIRD-ADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred -HHHHHHHHHHhc-ccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 0010000 0111 111234678999999999999999999877766666677899999999999999999999999999
Q ss_pred HHH
Q 024900 241 FVT 243 (261)
Q Consensus 241 fl~ 243 (261)
|+.
T Consensus 249 fl~ 251 (251)
T TIGR02427 249 FLR 251 (251)
T ss_pred HhC
Confidence 973
No 25
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=1.1e-26 Score=190.92 Aligned_cols=231 Identities=21% Similarity=0.335 Sum_probs=136.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|++.++||++|+||+|+|++|...- ...-....+++-|+++-.+.++++.+|+|||+||+++..||+.||++|..|
T Consensus 112 ~La~~~~vyaiDllG~G~SSRP~F~~---d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kL 188 (365)
T KOG4409|consen 112 DLAKIRNVYAIDLLGFGRSSRPKFSI---DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKL 188 (365)
T ss_pred hhhhcCceEEecccCCCCCCCCCCCC---CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceE
Confidence 47789999999999999999886321 122235578999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHH------------HHhh-hhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQ------------NLLR-NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (261)
|++++.....+....+...++-...+. .+++ ..+.+..+.+.+ ++... ..+.+ ...++.
T Consensus 189 iLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~-~~d~~-----~k~~~--~~~ed~ 260 (365)
T KOG4409|consen 189 ILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRL-RPDRF-----RKFPS--LIEEDF 260 (365)
T ss_pred EEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhh-hHHHH-----Hhccc--cchhHH
Confidence 999986443211011111111111110 0111 011111111100 01100 11111 122333
Q ss_pred H-HHHhccCCC-CchHHHHHHHHhhcCCCCcc---ccCCCC--CCCEEEEecCCCCCCCchhhhhhcc--CCCCccEEEc
Q 024900 149 V-EKILQPGLE-TGAADVFLEFICYSGGPLPE---ELLPQV--KCPVLIAWGDKDPWEPIELGRAYGN--FDSVEDFIVL 219 (261)
Q Consensus 149 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~l~~i--~~Pvlii~G~~D~~~~~~~~~~~~~--~~~~~~~~~i 219 (261)
+ +-+...+.+ +....++-.+... .+-..+ +.+..+ +|||++|+|++|. +....+..+.+ ....++.++|
T Consensus 261 l~~YiY~~n~~~psgE~~fk~l~~~-~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v 338 (365)
T KOG4409|consen 261 LHEYIYHCNAQNPSGETAFKNLFEP-GGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIV 338 (365)
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHhc-cchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEe
Confidence 2 222222222 2233333222211 000001 123333 5999999999985 45555544333 3344789999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|++||++.+|+|+.||+++..++++.
T Consensus 339 ~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 339 PGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCCceeecCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999998763
No 26
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=1.1e-26 Score=200.22 Aligned_cols=221 Identities=17% Similarity=0.242 Sum_probs=132.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC------CeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|+.+.. ..++++++++|+.++++.+..+ +++|+||||||.|++.+|+.+|++|
T Consensus 114 ~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v 187 (349)
T PLN02385 114 SGYGVFAMDYPGFGLSEGLHG------YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAW 187 (349)
T ss_pred CCCEEEEecCCCCCCCCCCCC------CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchh
Confidence 479999999999999986421 2358999999999999887643 7999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++....... .........+...+.........+. ...... ..+.+ ...............
T Consensus 188 ~glVLi~p~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~----~~~~~---~~~~~~~~~~~~~~~ 253 (349)
T PLN02385 188 DGAILVAPMCKIADD----VVPPPLVLQILILLANLLPKAKLVP---QKDLAE----LAFRD---LKKRKMAEYNVIAYK 253 (349)
T ss_pred hheeEeccccccccc----ccCchHHHHHHHHHHHHCCCceecC---CCcccc----ccccC---HHHHHHhhcCcceeC
Confidence 999999975432110 0000111111100000000000000 000000 00000 000000000000000
Q ss_pred -CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-C-CCCccEEEcCCCCCCCCCCChhh--
Q 024900 159 -TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-F-DSVEDFIVLPNVGHCPQDEAPHL-- 233 (261)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~-~~~~~~~~i~~~gH~~~~e~p~~-- 233 (261)
.........+.... ......+.+|++|||+|+|++|.++|++.++.+.+ + .++.++++++++||.+++|+|++
T Consensus 254 ~~~~~~~~~~~l~~~--~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 254 DKPRLRTAVELLRTT--QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred CCcchHHHHHHHHHH--HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhH
Confidence 00111111111100 00123477899999999999999999887766544 3 25689999999999999999987
Q ss_pred --HHHHHHHHHHhcCC
Q 024900 234 --VNPLVESFVTRHAT 247 (261)
Q Consensus 234 --~~~~l~~fl~~~~~ 247 (261)
+++.|.+||+++..
T Consensus 332 ~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 332 FQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 78889999987653
No 27
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=2.8e-26 Score=199.55 Aligned_cols=237 Identities=14% Similarity=0.130 Sum_probs=136.7
Q ss_pred cCCCCeEEEecCCCC-CCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~-G~S~~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~ 73 (261)
++++|+||++|+||+ |.|..+...... ....|+++++++++.++++++++++ ++|+||||||.+++.+|..
T Consensus 88 ~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 88 DTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred CccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHh
Confidence 378999999999993 544332110000 0125899999999999999999999 5999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh--------------hh-----hhHHHH-HhhcChHHHHHH
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--------------TA-----AGKLFY-KMVATSESVRNI 133 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-----~~~~~~-~~~~~~~~~~~~ 133 (261)
+|++|+++|++++.+..... . ..+.+........ .+ ..+.+. ....+...+...
T Consensus 168 ~p~~v~~lvl~~~~~~~~~~-~-----~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~ 241 (379)
T PRK00175 168 YPDRVRSALVIASSARLSAQ-N-----IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEK 241 (379)
T ss_pred ChHhhhEEEEECCCcccCHH-H-----HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhh
Confidence 99999999999976432100 0 0000000000000 00 000000 000111111111
Q ss_pred HHhhcCCCCC-------C-cHHHHHH----HhccCCCCchHHHHHHHH-hhcCC----CCccccCCCCCCCEEEEecCCC
Q 024900 134 LCQCYNDTSQ-------V-TEELVEK----ILQPGLETGAADVFLEFI-CYSGG----PLPEELLPQVKCPVLIAWGDKD 196 (261)
Q Consensus 134 ~~~~~~~~~~-------~-~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~i~~Pvlii~G~~D 196 (261)
+...+..... . .+.++.. .... ............. .+... ....+.+++|+||||+|+|++|
T Consensus 242 f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D 320 (379)
T PRK00175 242 FGRELQSGELPFGFDVEFQVESYLRYQGDKFVER-FDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSD 320 (379)
T ss_pred cCccccccccccCCCccchHHHHHHHHHHHHhhc-cCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCc
Confidence 1000000000 0 0111100 0000 0110000000010 11000 0113457899999999999999
Q ss_pred CCCCchhhhhhccCCCCc----cEEEcC-CCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 197 PWEPIELGRAYGNFDSVE----DFIVLP-NVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
.++|++..+.+.+.++++ ++.+++ ++||++++|+|++|++.|.+||++..
T Consensus 321 ~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 321 WLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 999999887777666665 677775 99999999999999999999998754
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=1.1e-26 Score=186.15 Aligned_cols=207 Identities=23% Similarity=0.365 Sum_probs=130.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++++|||+||.+++.++..+|++|+++|
T Consensus 21 l~~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 95 (228)
T PF12697_consen 21 LARGYRVIAFDLPGHGRSDPPPD-----YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLV 95 (228)
T ss_dssp HHTTSEEEEEECTTSTTSSSHSS-----GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhCCCEEEEEecCCccccccccc-----cCCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccce
Confidence 56799999999999999986531 1357899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++......... .......+.......... ...+. ...+.... ..+........ ..
T Consensus 96 l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~------~~~~~~~~~~~-----~~ 152 (228)
T PF12697_consen 96 LLSPPPPLPDSPS----RSFGPSFIRRLLAWRSRS---LRRLA-----SRFFYRWF------DGDEPEDLIRS-----SR 152 (228)
T ss_dssp EESESSSHHHHHC----HHHHHHHHHHHHHHHHHH---HHHHH-----HHHHHHHH------THHHHHHHHHH-----HH
T ss_pred eeccccccccccc----ccccchhhhhhhhccccc---ccccc-----cccccccc------ccccccccccc-----cc
Confidence 9998653221100 000000111111100000 00000 00000000 00011111000 00
Q ss_pred HHHHHHHhh-cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 163 DVFLEFICY-SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
..+..+... .........++++++|+++|+|++|.+++.+..+.+.+..+++++++++++||++++|+|++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 153 RALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 000000000 000001234567799999999999999998777777766678999999999999999999999864
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.9e-25 Score=195.28 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=132.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+++... ... .....+.+++++.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 128 L~~~~~vi~~D~rG~G~S~~~~~~-~~~-~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lv 205 (402)
T PLN02894 128 LASRFRVIAIDQLGWGGSSRPDFT-CKS-TEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLI 205 (402)
T ss_pred HHhCCEEEEECCCCCCCCCCCCcc-ccc-HHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 667899999999999999875311 000 001123457788888888899999999999999999999999999999999
Q ss_pred EeecchhhhhhccC-CCCCc--h-hhHHHHHHhh-hhhhhHHHHHhhc--ChHHHHHHHHhhcCC---CCCCcH---HHH
Q 024900 83 LLNISLRMLHIKKQ-PWYGR--P-LIRSFQNLLR-NTAAGKLFYKMVA--TSESVRNILCQCYND---TSQVTE---ELV 149 (261)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~---~~~ 149 (261)
++++.......... .+... . ....+..... ............. .+..........+.. ....++ +.+
T Consensus 206 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (402)
T PLN02894 206 LVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLL 285 (402)
T ss_pred EECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHH
Confidence 99875322110000 00000 0 0000000000 0000000000000 000111111111110 000111 111
Q ss_pred -HHHhccCCCCchHHHHHHHHh-hc--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 150 -EKILQPGLETGAADVFLEFIC-YS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
+.+...............+.. .. ......+.+.+|++||++|+|++|.+.+....+......+.+++++|+++||+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~~~~~~~~~~i~~aGH~ 365 (402)
T PLN02894 286 TDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNYEGAVEARKRMKVPCEIIRVPQGGHF 365 (402)
T ss_pred HHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHHcCCCCcEEEeCCCCCe
Confidence 111111111111111111110 00 00111245788999999999999987654433333334445789999999999
Q ss_pred CCCCChhhHHHHHHHHHHhcCCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~~ 248 (261)
+++|+|++|+++|.+|++...+.
T Consensus 366 ~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 366 VFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred eeccCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999887654
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=2.2e-25 Score=181.17 Aligned_cols=224 Identities=19% Similarity=0.253 Sum_probs=133.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~d-l~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+.. ...+++++++++ +..+++.++.++++++||||||.+++.+|.++|+.|++
T Consensus 23 ~L~~~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~ 97 (251)
T TIGR03695 23 LLGPHFRCLAIDLPGHGSSQSPDE-----IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQG 97 (251)
T ss_pred HhcccCeEEEEcCCCCCCCCCCCc-----cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheee
Confidence 356789999999999999976531 135789999999 77888888889999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH-hhcCCCCCCcHHHHHHHhccCCCC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++++.+.............. ...+...+.... .......... ..+......+++....+.......
T Consensus 98 lil~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR03695 98 LILESGSPGLATEEERAARRQN-DEQLAQRFEQEG----------LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN 166 (251)
T ss_pred eEEecCCCCcCchHhhhhhhhc-chhhhhHHHhcC----------ccHHHHHHhcCceeeecccCChHHhHHHHHhcccc
Confidence 9999875432110000000000 000000000000 0000000000 001010111111111111110000
Q ss_pred --c-hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 160 --G-AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 160 --~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
. ....+... .........+.+.+++||+++|+|++|..++ +..+.+.+..++++++.++++||++++|+|+++++
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~ 244 (251)
T TIGR03695 167 NPEGLAKMLRAT-GLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAK 244 (251)
T ss_pred cchHHHHHHHHh-hhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHH
Confidence 0 01111110 0000011123467899999999999998664 44555666667789999999999999999999999
Q ss_pred HHHHHHH
Q 024900 237 LVESFVT 243 (261)
Q Consensus 237 ~l~~fl~ 243 (261)
.|.+|++
T Consensus 245 ~i~~~l~ 251 (251)
T TIGR03695 245 ILLAFLE 251 (251)
T ss_pred HHHHHhC
Confidence 9999983
No 31
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=7.1e-26 Score=193.75 Aligned_cols=227 Identities=18% Similarity=0.231 Sum_probs=136.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|+.+.. ...+++.+++|+.++++.+.. .+++|+||||||.+++.++..+|++|
T Consensus 86 ~Gy~V~~~D~rGhG~S~~~~~------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v 159 (330)
T PLN02298 86 MGFACFALDLEGHGRSEGLRA------YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGF 159 (330)
T ss_pred CCCEEEEecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccc
Confidence 579999999999999974321 235789999999999998754 36999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH--hccC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI--LQPG 156 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 156 (261)
+++|++++...........+ .. ..+..... .++........ . ... ......+. ...+ ..+.
T Consensus 160 ~~lvl~~~~~~~~~~~~~~~---~~-~~~~~~~~------~~~~~~~~~~~-~----~~~-~~~~~~~~-~~~~~~~~~~ 222 (330)
T PLN02298 160 DGAVLVAPMCKISDKIRPPW---PI-PQILTFVA------RFLPTLAIVPT-A----DLL-EKSVKVPA-KKIIAKRNPM 222 (330)
T ss_pred eeEEEecccccCCcccCCch---HH-HHHHHHHH------HHCCCCccccC-C----Ccc-cccccCHH-HHHHHHhCcc
Confidence 99999987543211000000 00 00000000 00000000000 0 000 00000000 0000 0000
Q ss_pred -CCC-chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-C-CCCccEEEcCCCCCCCCCCChh
Q 024900 157 -LET-GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-F-DSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 157 -~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~-~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
... ........+.... ......+.+|++|||||+|++|.++|.+..+.+.+ + .++.++++++++||.++.++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd 300 (330)
T PLN02298 223 RYNGKPRLGTVVELLRVT--DYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPD 300 (330)
T ss_pred ccCCCccHHHHHHHHHHH--HHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCH
Confidence 000 0001111111100 00124577899999999999999999988776543 3 3568999999999999999986
Q ss_pred h----HHHHHHHHHHhcCCCCCcccccc
Q 024900 233 L----VNPLVESFVTRHATPPASVSAAS 256 (261)
Q Consensus 233 ~----~~~~l~~fl~~~~~~~~~~~~~~ 256 (261)
. +.+.+.+||.+...+.++.+.-|
T Consensus 301 ~~~~~~~~~i~~fl~~~~~~~~~~~~~~ 328 (330)
T PLN02298 301 ENIEIVRRDILSWLNERCTGKATPSEDS 328 (330)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCcccc
Confidence 4 66788899999888777776555
No 32
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.94 E-value=5.3e-26 Score=172.66 Aligned_cols=205 Identities=24% Similarity=0.274 Sum_probs=141.7
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
++|+++|.||||.|..|. |.+.. . -...-+++..++|++|..+++.++|||-||.-++-.|+++++.|.++|++++
T Consensus 72 ~TivawDPpGYG~SrPP~-Rkf~~-~--ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga 147 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPE-RKFEV-Q--FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGA 147 (277)
T ss_pred eEEEEECCCCCCCCCCCc-ccchH-H--HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecc
Confidence 899999999999998664 33211 1 1223356667889999999999999999999999999999999999999987
Q ss_pred chhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHH
Q 024900 87 SLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166 (261)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (261)
...... .+....+.+++...-.+.++ +-+...| ..+.+.+.+. .+.+...
T Consensus 148 ~ayvn~------~~~ma~kgiRdv~kWs~r~R-------------~P~e~~Y------g~e~f~~~wa-----~wvD~v~ 197 (277)
T KOG2984|consen 148 AAYVNH------LGAMAFKGIRDVNKWSARGR-------------QPYEDHY------GPETFRTQWA-----AWVDVVD 197 (277)
T ss_pred cceecc------hhHHHHhchHHHhhhhhhhc-------------chHHHhc------CHHHHHHHHH-----HHHHHHH
Confidence 644321 11111122221111000000 0011111 1222222211 1223333
Q ss_pred HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 167 EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 167 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.+..+-++++++-.+.+|+|||||++|++|++++....-.+....+.+++.++|.++|..|+.-+++||..+.+|++++
T Consensus 198 qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 198 QFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred HHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 4444455566677899999999999999999999887777777778899999999999999999999999999999875
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.93 E-value=3.5e-25 Score=184.20 Aligned_cols=220 Identities=17% Similarity=0.242 Sum_probs=130.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEee
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
+|+|+++|+||||.|..+... ...++++++++|+.+++++++.++++++||||||.+++.+|..+|++|+++|+++
T Consensus 53 g~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQPDDS----DELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISS 128 (288)
T ss_pred CCEEEEEcCCCCCCCCCCCcc----cccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEec
Confidence 799999999999999865311 1147899999999999999999999999999999999999999999999999988
Q ss_pred cchhhhhhccC-----CCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc---CCCCCCcHHHHHHHhccCC
Q 024900 86 ISLRMLHIKKQ-----PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY---NDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 86 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 157 (261)
+.......... ..........+...... .....+. ......... ........+.........
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (288)
T TIGR01250 129 MLDSAPEYVKELNRLRKELPPEVRAAIKRCEAS--------GDYDNPE-YQEAVEVFYHHLLCRTRKWPEALKHLKSGM- 198 (288)
T ss_pred ccccchHHHHHHHHHHhhcChhHHHHHHHHHhc--------cCcchHH-HHHHHHHHHHHhhcccccchHHHHHHhhcc-
Confidence 64321100000 00000000000000000 0000000 000000000 000000111111111000
Q ss_pred CCchHHHHHHHHh-----h---cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 158 ETGAADVFLEFIC-----Y---SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 158 ~~~~~~~~~~~~~-----~---~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
....+..+.. . .......+.+.+++||+++++|++|.+ +++..+.+.+..++.++++++++||++++|
T Consensus 199 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 274 (288)
T TIGR01250 199 ---NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIE 274 (288)
T ss_pred ---CHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccC
Confidence 0000000000 0 000011234678999999999999985 456566666666778999999999999999
Q ss_pred ChhhHHHHHHHHHH
Q 024900 230 APHLVNPLVESFVT 243 (261)
Q Consensus 230 ~p~~~~~~l~~fl~ 243 (261)
+|++|++.|..|++
T Consensus 275 ~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 275 DPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
No 34
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=3.8e-25 Score=184.55 Aligned_cols=213 Identities=17% Similarity=0.234 Sum_probs=126.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|+.... ...++.++++|+.+.+..+ ..++++|+||||||.+++.+|..+|++|++
T Consensus 51 ~g~~via~D~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~ 124 (276)
T PHA02857 51 LGILVFSHDHIGHGRSNGEKM------MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTA 124 (276)
T ss_pred CCCEEEEccCCCCCCCCCccC------CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccce
Confidence 479999999999999975321 2246777788887777654 235799999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++.... ... .....+................. .+... .....+.......+.....
T Consensus 125 lil~~p~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~ 184 (276)
T PHA02857 125 MILMSPLVNA---EAV-----PRLNLLAAKLMGIFYPNKIVGKL-CPESV-----------SRDMDEVYKYQYDPLVNHE 184 (276)
T ss_pred EEEecccccc---ccc-----cHHHHHHHHHHHHhCCCCccCCC-CHhhc-----------cCCHHHHHHHhcCCCccCC
Confidence 9999975321 000 01111111100000000000000 00000 0000111111111110000
Q ss_pred --hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCCCh---hhH
Q 024900 161 --AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAP---HLV 234 (261)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p---~~~ 234 (261)
............ ....+.+.++++|||+|+|++|.++|++.++.+.+ +.++.++.+++++||.++.|++ +++
T Consensus 185 ~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~ 262 (276)
T PHA02857 185 KIKAGFASQVLKAT--NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSV 262 (276)
T ss_pred CccHHHHHHHHHHH--HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHH
Confidence 000111111100 01124578899999999999999999988776654 4456799999999999999887 468
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
.+.+.+||+++
T Consensus 263 ~~~~~~~l~~~ 273 (276)
T PHA02857 263 MKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHh
Confidence 88888999874
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=186.81 Aligned_cols=212 Identities=25% Similarity=0.357 Sum_probs=132.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|.++|+|+++|+||||.|.... ..+++.++++++.++++.++..+++++||||||.+++.+|..+|+++.++|
T Consensus 154 l~~~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv 226 (371)
T PRK14875 154 LAAGRPVIALDLPGHGASSKAV-------GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLT 226 (371)
T ss_pred HhcCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEE
Confidence 5677999999999999996432 246899999999999999998999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++...... ....+...+....... .+...+...+.+......................
T Consensus 227 ~~~~~~~~~~------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T PRK14875 227 LIAPAGLGPE------INGDYIDGFVAAESRR--------------ELKPVLELLFADPALVTRQMVEDLLKYKRLDGVD 286 (371)
T ss_pred EECcCCcCcc------cchhHHHHhhcccchh--------------HHHHHHHHHhcChhhCCHHHHHHHHHHhccccHH
Confidence 9986532110 0000110000000000 0000000001111111122221111100000000
Q ss_pred HHHHHHHh--hcC---CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 163 DVFLEFIC--YSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 163 ~~~~~~~~--~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
..+..+.. +.. .......+.+++||+|+|+|++|..+|.+..+. +.++.++.+++++||++++|+|+++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~---l~~~~~~~~~~~~gH~~~~e~p~~~~~~ 363 (371)
T PRK14875 287 DALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG---LPDGVAVHVLPGAGHMPQMEAAADVNRL 363 (371)
T ss_pred HHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh---ccCCCeEEEeCCCCCChhhhCHHHHHHH
Confidence 11111100 000 000123467889999999999999998765443 3345789999999999999999999999
Q ss_pred HHHHHHh
Q 024900 238 VESFVTR 244 (261)
Q Consensus 238 l~~fl~~ 244 (261)
|.+|+++
T Consensus 364 i~~fl~~ 370 (371)
T PRK14875 364 LAEFLGK 370 (371)
T ss_pred HHHHhcc
Confidence 9999975
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=3.3e-25 Score=189.53 Aligned_cols=230 Identities=13% Similarity=0.085 Sum_probs=130.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++.+|+|+++|+||||.|+++.... .....++++++++|+..+++.+ +..+++++||||||.|++.+|+.+|++|
T Consensus 78 ~~~g~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v 156 (330)
T PRK10749 78 FHLGYDVLIIDHRGQGRSGRLLDDP-HRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVF 156 (330)
T ss_pred HHCCCeEEEEcCCCCCCCCCCCCCC-CcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCc
Confidence 3578999999999999998642110 0112368999999999999887 5678999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc-CCCCCCcH----HHHHHHh
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY-NDTSQVTE----ELVEKIL 153 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~ 153 (261)
+++|++++...... ..+ ......+.............+. ....... ...+ .+.-...+ +.++.+.
T Consensus 157 ~~lvl~~p~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~ 226 (330)
T PRK10749 157 DAIALCAPMFGIVL--PLP---SWMARRILNWAEGHPRIRDGYA-IGTGRWR----PLPFAINVLTHSRERYRRNLRFYA 226 (330)
T ss_pred ceEEEECchhccCC--CCC---cHHHHHHHHHHHHhcCCCCcCC-CCCCCCC----CCCcCCCCCCCCHHHHHHHHHHHH
Confidence 99999987532110 000 0111111111000000000000 0000000 0000 00000001 1111111
Q ss_pred ccC-CCC--chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-------CCccEEEcCCCC
Q 024900 154 QPG-LET--GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVG 223 (261)
Q Consensus 154 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~i~~~g 223 (261)
... ... ............. ......+.++++|||+|+|++|.+++++.++.+.+.. ++++++++|++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gag 304 (330)
T PRK10749 227 DDPELRVGGPTYHWVRESILAG--EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAY 304 (330)
T ss_pred hCCCcccCCCcHHHHHHHHHHH--HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCc
Confidence 111 100 0011111111000 0001346789999999999999999998766543321 346899999999
Q ss_pred CCCCCCCh---hhHHHHHHHHHHhc
Q 024900 224 HCPQDEAP---HLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p---~~~~~~l~~fl~~~ 245 (261)
|.++.|.+ +++.+.+.+|++++
T Consensus 305 H~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 305 HEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred chhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999887 56778888899765
No 37
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.92 E-value=1.2e-25 Score=181.58 Aligned_cols=219 Identities=21% Similarity=0.287 Sum_probs=129.7
Q ss_pred CeEEEecCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 7 HRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~---~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
|+|+++|+||+|.|+. .. ...|+..++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD------FPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG------SCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC------cccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999984 22 25689999999999999999999999999999999999999999999999999
Q ss_pred eecch--hhhhhccCCCCCc-hhhHHHHHHhhh--hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 84 LNISL--RMLHIKKQPWYGR-PLIRSFQNLLRN--TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 84 ~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
++++. ..... . +...+ .....+...... .............. .......... ................
T Consensus 75 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~- 147 (230)
T PF00561_consen 75 ISPPPDLPDGLW-N-RIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ---FFAYDREFVE-DFLKQFQSQQYARFAE- 147 (230)
T ss_dssp ESESSHHHHHHH-H-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-THHHHHHHHHHHHTCH-
T ss_pred Eeeeccchhhhh-H-HHHhhhhhhhhHHHhhhccccccchhhhhhhhhh---eeeccCcccc-chhhccchhhhhHHHH-
Confidence 99851 11000 0 00000 000000000000 00000000000000 0000000000 0000000000000000
Q ss_pred CchHHHHHH-HH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 159 TGAADVFLE-FI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 159 ~~~~~~~~~-~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
......... .. ..... .....+..|++|+++++|++|.++|++....+.+..|+.+++.++++||+.+++.|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 148 TDAFDNMFWNALGYFSVW-DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred HHHHhhhccccccccccc-cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhh
Confidence 000000000 00 00000 0123466799999999999999999998877777788899999999999999999999999
Q ss_pred HHH
Q 024900 237 LVE 239 (261)
Q Consensus 237 ~l~ 239 (261)
+|.
T Consensus 227 ~i~ 229 (230)
T PF00561_consen 227 III 229 (230)
T ss_dssp HHH
T ss_pred hhc
Confidence 885
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=5.4e-24 Score=184.48 Aligned_cols=235 Identities=15% Similarity=0.148 Sum_probs=138.1
Q ss_pred CCCeEEEecCCCCCCCCCC-------C---C---CCCC-CCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKP-------N---P---RDFF-DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQ 69 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~-------~---~---~~~~-~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~ 69 (261)
+.|.||++|..|-|.|..| . + ++.. +...|++.++++++..+++++++++++ +|||||||+++++
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~ 177 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQE 177 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHH
Confidence 5799999999998764322 0 1 0000 123589999999999999999999987 9999999999999
Q ss_pred HHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHh-hhh------------h-----hh-HHHHHhhcChHHH
Q 024900 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLL-RNT------------A-----AG-KLFYKMVATSESV 130 (261)
Q Consensus 70 ~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~-----~~-~~~~~~~~~~~~~ 130 (261)
+|.+||++|+++|++++.++.. ++....+.+.....+ ..+ + .. ........+++.+
T Consensus 178 ~a~~~P~~v~~lv~ia~~~~~~-----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~ 252 (389)
T PRK06765 178 WAVHYPHMVERMIGVIGNPQND-----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFY 252 (389)
T ss_pred HHHHChHhhheEEEEecCCCCC-----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999998764321 110001111111101 000 0 00 0001111122222
Q ss_pred HHHHHhhcCCC--------CCCc-HHHHHHHhccCCCCchHHHHHHHH-hhcCCC------CccccCCCCCCCEEEEecC
Q 024900 131 RNILCQCYNDT--------SQVT-EELVEKILQPGLETGAADVFLEFI-CYSGGP------LPEELLPQVKCPVLIAWGD 194 (261)
Q Consensus 131 ~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~l~~i~~Pvlii~G~ 194 (261)
...+....... ...+ +.+++.........-....+..+. .+...+ ...+.+.+|++|||+|+|+
T Consensus 253 ~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~ 332 (389)
T PRK06765 253 ETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCK 332 (389)
T ss_pred HHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeC
Confidence 11111000000 0000 122222211111111111111111 111111 1234578999999999999
Q ss_pred CCCCCCchhhhhhccCCC----CccEEEcCC-CCCCCCCCChhhHHHHHHHHHHh
Q 024900 195 KDPWEPIELGRAYGNFDS----VEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 195 ~D~~~~~~~~~~~~~~~~----~~~~~~i~~-~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+|.++|++..+.+.+..+ ++++++|++ +||++++|+|++|++.|.+||++
T Consensus 333 ~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 333 QDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999887776665443 688999985 99999999999999999999965
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=6.3e-24 Score=176.89 Aligned_cols=215 Identities=20% Similarity=0.188 Sum_probs=128.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
.+|+|+++|+||||.|.... ...++++++++++.++++++. .++++||||||||.+++.++..+|++|+++|+
T Consensus 44 ~g~~vi~~dl~g~G~s~~~~------~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~ 117 (273)
T PLN02211 44 SGYKVTCIDLKSAGIDQSDA------DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVY 117 (273)
T ss_pred CCCEEEEecccCCCCCCCCc------ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEE
Confidence 57999999999999985322 124799999999999999985 58999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhh---hHHHH------HhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA---GKLFY------KMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
+++.....+.... ......+......... ..... ......+....++ +.+.+....+.......
T Consensus 118 ~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 190 (273)
T PLN02211 118 VAATMLKLGFQTD----EDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL---YQMSPQEDSTLAAMLLR 190 (273)
T ss_pred eccccCCCCCCHH----HHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH---hcCCCHHHHHHHHHhcC
Confidence 9764321100000 0000000000000000 00000 0000011111110 11100000000111111
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCC-CCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
+ ..... +.. ....+...++ ++|+++|+|++|..+|++..+.+.+..+..+++.++ +||.|++++|++
T Consensus 191 ~----~~~~~------~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~ 258 (273)
T PLN02211 191 P----GPILA------LRS-ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFL 258 (273)
T ss_pred C----cCccc------ccc-ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHH
Confidence 0 00000 000 0111223455 899999999999999999888887766677999996 899999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
|+.+|.++...
T Consensus 259 ~~~~i~~~a~~ 269 (273)
T PLN02211 259 LFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHHHH
Confidence 99999988654
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=5.2e-24 Score=212.09 Aligned_cols=234 Identities=20% Similarity=0.196 Sum_probs=134.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|..+.... ......|+++.+++++.+++++++.++++|+||||||.|++.+|.++|++|++
T Consensus 1393 ~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~ 1472 (1655)
T PLN02980 1393 AISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEG 1472 (1655)
T ss_pred HHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCE
Confidence 36778999999999999997542100 00113578999999999999999999999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchh-hHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPL-IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
+|++++.+....... +..+.. .......+..... ..+..........+ ....... -.+.+..........
T Consensus 1473 lVlis~~p~~~~~~~--~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~ 1543 (1655)
T PLN02980 1473 AVIISGSPGLKDEVA--RKIRSAKDDSRARMLIDHGL-EIFLENWYSGELWK-----SLRNHPH-FNKIVASRLLHKDVP 1543 (1655)
T ss_pred EEEECCCCccCchHH--HHHHhhhhhHHHHHHHhhhH-HHHHHHhccHHHhh-----hhccCHH-HHHHHHHHHhcCCHH
Confidence 999987542210000 000000 0000000000000 00100000000000 0000000 001111111100000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC------------ccEEEcCCCCCCCC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV------------EDFIVLPNVGHCPQ 227 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------~~~~~i~~~gH~~~ 227 (261)
.....+..+..... ....+.+++|++|||+|+|++|..++ +.++.+.+..++ +++++|+++||+++
T Consensus 1544 ~~~~~l~~~~~~~~-~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~ 1621 (1655)
T PLN02980 1544 SLAKLLSDLSIGRQ-PSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVH 1621 (1655)
T ss_pred HHHHHHHHhhhccc-chHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchH
Confidence 00011111100001 11124588999999999999999775 433344332222 48999999999999
Q ss_pred CCChhhHHHHHHHHHHhcC
Q 024900 228 DEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~~ 246 (261)
+|+|++|++.|.+||++..
T Consensus 1622 lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1622 LENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHCHHHHHHHHHHHHHhcc
Confidence 9999999999999998754
No 41
>PLN02511 hydrolase
Probab=99.90 E-value=4.2e-23 Score=179.91 Aligned_cols=226 Identities=16% Similarity=0.222 Sum_probs=129.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCccc-
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEI- 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~- 77 (261)
+.++|+|+++|+||||.|....+ ..| ...+++|+.++++.+.. .+++++||||||.+++.++..+|++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~------~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~ 198 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTP------QFY-SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC 198 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCc------CEE-cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC
Confidence 46889999999999999975432 122 35667888888888765 5899999999999999999999987
Q ss_pred -ccceEEeecchhhh-hhcc-CCCCCchhhHHHHHHhhhhhh-hHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 78 -CRGMILLNISLRML-HIKK-QPWYGRPLIRSFQNLLRNTAA-GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 78 -v~~lv~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
|.++++++++.... .... .......+...+...+++... ....+...........+. ......++-+.+.
T Consensus 199 ~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~fd~~~t 272 (388)
T PLN02511 199 PLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVA------NAKTVRDFDDGLT 272 (388)
T ss_pred CceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHH------hCCCHHHHHHhhh
Confidence 88888887653221 0000 000000000000000000000 000000000000000000 0000011111111
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.+.......+.|+ .. ......+++|++|||+|+|++|+++|.+.. ....+..+++++++++++||++++|+|+
T Consensus 273 ~~~~gf~~~~~yy---~~---~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~ 346 (388)
T PLN02511 273 RVSFGFKSVDAYY---SN---SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPE 346 (388)
T ss_pred hhcCCCCCHHHHH---HH---cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCC
Confidence 1111111112121 10 012346889999999999999999987754 3344557789999999999999999998
Q ss_pred h------HHHHHHHHHHhcCC
Q 024900 233 L------VNPLVESFVTRHAT 247 (261)
Q Consensus 233 ~------~~~~l~~fl~~~~~ 247 (261)
. +++.+.+|++....
T Consensus 347 ~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 347 APFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCCCCccHHHHHHHHHHHHHH
Confidence 6 48999999976543
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.90 E-value=7.8e-23 Score=173.19 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=70.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|+|+++|+||||.|+.+.. ...++..++++|+..++++++.++++++||||||.+++.++..+|++|+++|+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl 125 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHAC-----LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhhee
Confidence 4679999999999999985421 12367889999999999999999999999999999999999999999999999
Q ss_pred eecch
Q 024900 84 LNISL 88 (261)
Q Consensus 84 ~~~~~ 88 (261)
+++..
T Consensus 126 ~~~~~ 130 (306)
T TIGR01249 126 RGIFL 130 (306)
T ss_pred ecccc
Confidence 98753
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.90 E-value=9.7e-23 Score=186.69 Aligned_cols=232 Identities=17% Similarity=0.185 Sum_probs=130.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhh--Ccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM--EPEIC 78 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~--~p~~v 78 (261)
.|+++|+|+++|+||||.|+.+.. ...|+++++++|+.+++++++.++ ++|+||||||.+++.++.. +|+++
T Consensus 47 ~L~~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v 121 (582)
T PRK05855 47 LLADRFRVVAYDVRGAGRSSAPKR-----TAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRI 121 (582)
T ss_pred HhhcceEEEEecCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhh
Confidence 467899999999999999986532 135899999999999999998765 9999999999999998876 35666
Q ss_pred cceEEeecchhhh--h-hccCC--CCCchhhHHHHHHhhhhhh--------hHHHHHhhcChHHHHHHHHhhcCCCCCCc
Q 024900 79 RGMILLNISLRML--H-IKKQP--WYGRPLIRSFQNLLRNTAA--------GKLFYKMVATSESVRNILCQCYNDTSQVT 145 (261)
Q Consensus 79 ~~lv~~~~~~~~~--~-~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (261)
..++.++++.... . ..... .........+......... ....+.... .......... ... ....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~ 198 (582)
T PRK05855 122 ASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGL-GRAWPRLLRR-VEG-TPVD 198 (582)
T ss_pred hhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccch-hhHHHHhhhh-ccC-CCcc
Confidence 6666665432100 0 00000 0000000001000000000 000000000 0000000000 000 0000
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
........ .... .....+..... .......+..+++|+++|+|++|.++|.+..+.+.+..++.+++.++ +||+
T Consensus 199 ~~~~~~~~-~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~ 272 (582)
T PRK05855 199 PIPTQTTL-SDGA-HGVKLYRANMI---RSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHW 272 (582)
T ss_pred hhhhhhhh-cccc-chHHHHHhhhh---hhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCc
Confidence 00000000 0000 00111110000 00112235668999999999999999988777777666777887775 6999
Q ss_pred CCCCChhhHHHHHHHHHHhcCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
+++|+|++|++.|.+|+.+...
T Consensus 273 ~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 273 LPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred chhhChhHHHHHHHHHHHhccC
Confidence 9999999999999999987543
No 44
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=4.3e-22 Score=173.25 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=128.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcc---
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPE--- 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~--- 76 (261)
+.+|+|+++|+||||.|+.... ..++++.+++|+.++++.+.. .+++++||||||.+++.++. +|+
T Consensus 161 ~~Gy~V~~~D~rGhG~S~~~~~------~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~ 233 (395)
T PLN02652 161 SCGFGVYAMDWIGHGGSDGLHG------YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIED 233 (395)
T ss_pred HCCCEEEEeCCCCCCCCCCCCC------CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCccc
Confidence 3689999999999999986421 235788999999999888763 37999999999999998764 664
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH-HHHHhcc
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL-VEKILQP 155 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 155 (261)
+|+++|+.++...... .......+..+... ......+..... .......+++. ...+..+
T Consensus 234 ~v~glVL~sP~l~~~~-------~~~~~~~~~~l~~~-~~p~~~~~~~~~-----------~~~~~s~~~~~~~~~~~dp 294 (395)
T PLN02652 234 KLEGIVLTSPALRVKP-------AHPIVGAVAPIFSL-VAPRFQFKGANK-----------RGIPVSRDPAALLAKYSDP 294 (395)
T ss_pred ccceEEEECccccccc-------chHHHHHHHHHHHH-hCCCCcccCccc-----------ccCCcCCCHHHHHHHhcCC
Confidence 8999999886532210 00111111000000 000000000000 00000001111 1111111
Q ss_pred CCCCchH--HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccC-CCCccEEEcCCCCCCCCCC-C
Q 024900 156 GLETGAA--DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNF-DSVEDFIVLPNVGHCPQDE-A 230 (261)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~-~~~~~~~~i~~~gH~~~~e-~ 230 (261)
....+.. .....+.... ....+.+.+|++|+|+|+|++|.++|++.++.+ .+. .++.+++++++++|.++.| +
T Consensus 295 ~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~ 372 (395)
T PLN02652 295 LVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPE 372 (395)
T ss_pred CcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCC
Confidence 1111111 1111111110 001234678999999999999999998877665 333 2357899999999998766 7
Q ss_pred hhhHHHHHHHHHHhcCC
Q 024900 231 PHLVNPLVESFVTRHAT 247 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~~ 247 (261)
|+++.+.+.+||..+..
T Consensus 373 ~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 373 REEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987654
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=9e-21 Score=155.67 Aligned_cols=219 Identities=16% Similarity=0.164 Sum_probs=135.6
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhH-HHHHHHHhhCcccccce
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGG-LVGLQAAVMEPEICRGM 81 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~l 81 (261)
..||+.|+|-||.|.+. ..++...+++|+..||+..+ ..+++++|||||| -+++..++.+|+.+..+
T Consensus 81 ~~v~~vd~RnHG~Sp~~--------~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rl 152 (315)
T KOG2382|consen 81 RDVYAVDVRNHGSSPKI--------TVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERL 152 (315)
T ss_pred CceEEEecccCCCCccc--------cccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCccccee
Confidence 58999999999999764 23678999999999999885 4689999999999 78888888899999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC--
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-- 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (261)
|+++.++.... .....+.+-+..+..-+... .. .....+..+.+.+..+.+ .-..++...+.++...
T Consensus 153 iv~D~sP~~~~-----~~~~e~~e~i~~m~~~d~~~-~~--~~~rke~~~~l~~~~~d~---~~~~fi~~nl~~~~~~~s 221 (315)
T KOG2382|consen 153 IVEDISPGGVG-----RSYGEYRELIKAMIQLDLSI-GV--SRGRKEALKSLIEVGFDN---LVRQFILTNLKKSPSDGS 221 (315)
T ss_pred EEEecCCccCC-----cccchHHHHHHHHHhccccc-cc--cccHHHHHHHHHHHhcch---HHHHHHHHhcCcCCCCCc
Confidence 99998764211 11111122222211111100 00 000011111111111100 0001111112110000
Q ss_pred ----chHHHHHHHHhh-cCCCCccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 160 ----GAADVFLEFICY-SGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 160 ----~~~~~~~~~~~~-~~~~~~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.-.+...++... ... ..+..+ ...+.|||+|.|.++.+++.+.-..+..+.|..++++|++|||+.|+|+|+
T Consensus 222 ~~w~~nl~~i~~~~~~~~~~-s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~ 300 (315)
T KOG2382|consen 222 FLWRVNLDSIASLLDEYEIL-SYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPE 300 (315)
T ss_pred eEEEeCHHHHHHHHHHHHhh-cccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHH
Confidence 001222222111 000 011112 567899999999999999998877788888889999999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
+|.++|.+|++.+
T Consensus 301 ~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 301 EFIESISEFLEEP 313 (315)
T ss_pred HHHHHHHHHhccc
Confidence 9999999999764
No 46
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=1.9e-20 Score=157.15 Aligned_cols=227 Identities=19% Similarity=0.259 Sum_probs=132.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
...+|.||++|+||||.|.+ ..+. ..-++.+|.+|+..+++.... .+++++||||||.|++.++.+++..|
T Consensus 58 ~~~G~~V~~~D~RGhG~S~r-~~rg----~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i 132 (298)
T COG2267 58 AARGFDVYALDLRGHGRSPR-GQRG----HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRI 132 (298)
T ss_pred HhCCCEEEEecCCCCCCCCC-CCcC----CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccc
Confidence 35789999999999999973 1111 122489999999999988753 68999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC-
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL- 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (261)
+++|+.++.+.... . .... .+...... ...+.. ..+..... . ..........-+++.++.+.....
T Consensus 133 ~~~vLssP~~~l~~-----~--~~~~-~~~~~~~~-~~~~~~-p~~~~~~~-~--~~~~~~~~~sr~~~~~~~~~~dP~~ 199 (298)
T COG2267 133 DGLVLSSPALGLGG-----A--ILRL-ILARLALK-LLGRIR-PKLPVDSN-L--LEGVLTDDLSRDPAEVAAYEADPLI 199 (298)
T ss_pred cEEEEECccccCCh-----h--HHHH-HHHHHhcc-cccccc-cccccCcc-c--ccCcCcchhhcCHHHHHHHhcCCcc
Confidence 99999988654321 0 0000 00000000 000000 00000000 0 000000000012333333332221
Q ss_pred CCc-hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCC-chh-hhhhccC-CCCccEEEcCCCCCCCCCCCh--
Q 024900 158 ETG-AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP-IEL-GRAYGNF-DSVEDFIVLPNVGHCPQDEAP-- 231 (261)
Q Consensus 158 ~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~-~~~-~~~~~~~-~~~~~~~~i~~~gH~~~~e~p-- 231 (261)
..+ .......................+++|||+++|++|.+++ .+. .+.+.+. .++.++++++|+.|.++.|.+
T Consensus 200 ~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 200 GVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchH
Confidence 211 1111111111111111122356789999999999999998 454 3445544 566799999999999886554
Q ss_pred -hhHHHHHHHHHHhcCC
Q 024900 232 -HLVNPLVESFVTRHAT 247 (261)
Q Consensus 232 -~~~~~~l~~fl~~~~~ 247 (261)
+++.+.+.+|+.+...
T Consensus 280 r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 280 REEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 6788888899987543
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=1.9e-19 Score=157.80 Aligned_cols=190 Identities=16% Similarity=0.166 Sum_probs=120.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
+.+|+|+++|+||||.|..... ..+......++.+.+... +.+++.++||||||.+++.+|..+|++|++
T Consensus 220 ~~Gy~vl~~D~pG~G~s~~~~~-------~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a 292 (414)
T PRK05077 220 PRGIAMLTIDMPSVGFSSKWKL-------TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKA 292 (414)
T ss_pred hCCCEEEEECCCCCCCCCCCCc-------cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceE
Confidence 4679999999999999965321 123444455666666554 457899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++..... .. . ...... . +......+....+. ...+.+.+...+.
T Consensus 293 ~V~~~~~~~~~--~~-----~--~~~~~~----~------------p~~~~~~la~~lg~-~~~~~~~l~~~l~------ 340 (414)
T PRK05077 293 VACLGPVVHTL--LT-----D--PKRQQQ----V------------PEMYLDVLASRLGM-HDASDEALRVELN------ 340 (414)
T ss_pred EEEECCccchh--hc-----c--hhhhhh----c------------hHHHHHHHHHHhCC-CCCChHHHHHHhh------
Confidence 99998753210 00 0 000000 0 00000001111110 0111121111110
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
.+... .......++++|+|+|+|++|.++|++.++.+.+..++++++.||++ ++++.|++++..+.+
T Consensus 341 ---------~~sl~-~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~ 407 (414)
T PRK05077 341 ---------RYSLK-VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISD 407 (414)
T ss_pred ---------hccch-hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHH
Confidence 01000 00111257999999999999999999988877777778999999997 566899999999999
Q ss_pred HHHhc
Q 024900 241 FVTRH 245 (261)
Q Consensus 241 fl~~~ 245 (261)
||+++
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 99875
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.83 E-value=1.5e-19 Score=150.75 Aligned_cols=200 Identities=14% Similarity=0.089 Sum_probs=115.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|+|+++|+||||.|... .+++.++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+
T Consensus 56 ~G~~v~~~Dl~G~G~S~~~---------~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~ 125 (274)
T TIGR03100 56 AGFPVLRFDYRGMGDSEGE---------NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVA 125 (274)
T ss_pred CCCEEEEeCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCcc
Confidence 5799999999999999642 246778888888888776 45679999999999999999864 56899
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC---cHHHHHHHh-c-
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV---TEELVEKIL-Q- 154 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~- 154 (261)
++|++++...... . .....+... +.....+.......+. +. ... ..+....+. .
T Consensus 126 ~lil~~p~~~~~~-----~---~~~~~~~~~---------~~~~~~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~~~~ 184 (274)
T TIGR03100 126 GLVLLNPWVRTEA-----A---QAASRIRHY---------YLGQLLSADFWRKLLS---GE-VNLGSSLRGLGDALLKAR 184 (274)
T ss_pred EEEEECCccCCcc-----c---chHHHHHHH---------HHHHHhChHHHHHhcC---CC-ccHHHHHHHHHHHHHhhh
Confidence 9999997532110 0 000001000 0001111110010000 00 000 000000000 0
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-----hhhcc-C-CCCccEEEcCCCCCCCC
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-----RAYGN-F-DSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-----~~~~~-~-~~~~~~~~i~~~gH~~~ 227 (261)
+.-.......+. . . ....|.++++|+++++|++|...+.... ...++ + .++.++..++++||++.
T Consensus 185 ~~~~~~~~~~~~---~----~-~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~ 256 (274)
T TIGR03100 185 QKGDEVAHGGLA---E----R-MKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFS 256 (274)
T ss_pred hcCCCcccchHH---H----H-HHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccc
Confidence 000000000000 0 0 0134567799999999999987542210 22222 2 26788999999999984
Q ss_pred -CCChhhHHHHHHHHHH
Q 024900 228 -DEAPHLVNPLVESFVT 243 (261)
Q Consensus 228 -~e~p~~~~~~l~~fl~ 243 (261)
.+.++++++.|.+||+
T Consensus 257 ~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 257 DRVWREWVAARTTEWLR 273 (274)
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 5556999999999995
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.82 E-value=4.1e-19 Score=151.87 Aligned_cols=220 Identities=15% Similarity=0.155 Sum_probs=123.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------------------------CCCeEEEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------------------------KDQAFFIC 59 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------------------------~~~~~lvG 59 (261)
..+|+|+++|+||||+|+...... ....+++++++|+.++++... ..+++|+|
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~~~~---g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQNLR---GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HCCCcEEEecccccCCCccccccc---cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 468999999999999997532110 112479999999999987642 24699999
Q ss_pred cChhHHHHHHHHhhCcc--------cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHH
Q 024900 60 NSIGGLVGLQAAVMEPE--------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVR 131 (261)
Q Consensus 60 hS~Gg~va~~~a~~~p~--------~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (261)
|||||.|++.++..+++ .++++|++++....... ..+. ...+......++.. +. .++..+....
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~-~~~~-~~~~~~~~~~l~~~--~~-~~~p~~~~~~--- 220 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSV-GSDD-SFKFKYFYLPVMNF--MS-RVFPTFRISK--- 220 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecc-cCCC-cchhhhhHHHHHHH--HH-HHCCcccccC---
Confidence 99999999999976543 58999888876432100 0000 00000000001100 00 0000000000
Q ss_pred HHHHhhcCCCCCCcHHHHHHHhccCCC-Cc--hHHHHHHHHhhcCCCCccccCCCC--CCCEEEEecCCCCCCCchhhhh
Q 024900 132 NILCQCYNDTSQVTEELVEKILQPGLE-TG--AADVFLEFICYSGGPLPEELLPQV--KCPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~~~~~~~~ 206 (261)
....+ .++...+......+. .+ ....+..+..... .. ...+..+ ++|+|+|+|++|.+++++.++.
T Consensus 221 ----~~~~~---~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~-~~-~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 221 ----KIRYE---KSPYVNDIIKFDKFRYDGGITFNLASELIKATD-TL-DCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred ----ccccc---cChhhhhHHhcCccccCCcccHHHHHHHHHHHH-HH-HhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 00000 001111111111111 00 1112222211100 00 1123444 7999999999999999887665
Q ss_pred hc-cC-CCCccEEEcCCCCCCCCCCC-hhhHHHHHHHHHH
Q 024900 207 YG-NF-DSVEDFIVLPNVGHCPQDEA-PHLVNPLVESFVT 243 (261)
Q Consensus 207 ~~-~~-~~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~ 243 (261)
+. +. .++.+++++++++|.++.|. ++++.+.+.+||+
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 43 33 35678999999999999875 6889999999985
No 50
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.81 E-value=2e-18 Score=154.10 Aligned_cols=225 Identities=15% Similarity=0.109 Sum_probs=124.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHH----HHHhhC-ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGL----QAAVME-PEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~----~~a~~~-p~~ 77 (261)
++++|+||++|++|+|.|.+... ...|..+.+.+.|..+++.++.++++++||||||.++. .+++.+ |++
T Consensus 217 ~~qGf~V~~iDwrgpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r 291 (532)
T TIGR01838 217 VEQGHTVFVISWRNPDASQADKT-----FDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKR 291 (532)
T ss_pred HHCCcEEEEEECCCCCcccccCC-----hhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCc
Confidence 45789999999999999865321 12355555666677777777889999999999999862 245555 889
Q ss_pred ccceEEeecchhhhhhccC-CCCCchhhHHHHHHhhhh--hhh---HHHHHhhcChHHHHH-HHHhhcCCCCCCcHHHHH
Q 024900 78 CRGMILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLRNT--AAG---KLFYKMVATSESVRN-ILCQCYNDTSQVTEELVE 150 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 150 (261)
|+++|++++..-+...... .+........++..+... ..+ ...|+.+.....+.. .+.......... .-.+.
T Consensus 292 v~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~-~fdll 370 (532)
T TIGR01838 292 IKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPV-PFDLL 370 (532)
T ss_pred cceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCcc-chhHH
Confidence 9999999976432110000 000011111222222110 000 112332222222111 111111111111 11111
Q ss_pred HHhccCCC-Cch-HHHHH-HHHhhc---CCCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC
Q 024900 151 KILQPGLE-TGA-ADVFL-EFICYS---GGPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (261)
Q Consensus 151 ~~~~~~~~-~~~-~~~~~-~~~~~~---~~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~ 220 (261)
.+.....+ ++. ...+. .++... .+.. ....+.+|++|+++|+|++|.++|++.+..+.+..++.+..+++
T Consensus 371 ~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~ 450 (532)
T TIGR01838 371 FWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLG 450 (532)
T ss_pred HHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEEC
Confidence 11111222 111 11111 121111 0111 12457899999999999999999998887766666678888999
Q ss_pred CCCCCCCCCChhh
Q 024900 221 NVGHCPQDEAPHL 233 (261)
Q Consensus 221 ~~gH~~~~e~p~~ 233 (261)
++||.+++++|.-
T Consensus 451 ~sGHi~~ienPp~ 463 (532)
T TIGR01838 451 ESGHIAGVVNPPS 463 (532)
T ss_pred CCCCchHhhCCCC
Confidence 9999999988853
No 51
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.80 E-value=2.6e-18 Score=139.59 Aligned_cols=222 Identities=20% Similarity=0.303 Sum_probs=121.2
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
|+|+++|+||||.|. .. .+....+++++..+++.++..+++++||||||.+++.++..+|++++++|++++
T Consensus 51 ~~~~~~d~~g~g~s~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA--------GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEecccCCCCCC-cc--------cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 999999999999997 10 134455589999999999999999999999999999999999999999999997
Q ss_pred chhhhhhccCCC--CCchhhHHHHHHhhhhhhhHHHHHhhcChH-HHHHHHH----hhcCCCCCCcHHHHHHHhccCCCC
Q 024900 87 SLRMLHIKKQPW--YGRPLIRSFQNLLRNTAAGKLFYKMVATSE-SVRNILC----QCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 87 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
............ ................. ........... ....... ...................... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 198 (282)
T COG0596 122 APPPGLLEAALRQPAGAAPLAALADLLLGLD--AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAA-R 198 (282)
T ss_pred CCCcccccCccccCccccchhhhhhhhhccc--hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhc-c
Confidence 643110000000 00000000000000000 00000000000 0000000 0000000000000000000000 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
...... ..... .......+..+++|+++++|++|.+.|......+.+..++ .++.+++++||++++++|+.+++.+
T Consensus 199 ~~~~~~--~~~~~-~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 199 ADLAAA--LLALL-DRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cccchh--hhccc-ccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHH
Confidence 000000 00000 0011234667899999999999966665543445555553 7999999999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
.+|++
T Consensus 276 ~~~~~ 280 (282)
T COG0596 276 LAFLE 280 (282)
T ss_pred HHHHh
Confidence 88554
No 52
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.79 E-value=3.1e-18 Score=132.53 Aligned_cols=197 Identities=19% Similarity=0.275 Sum_probs=124.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
++|+|++|-+||||....- + -.+++++|-+|+.+-.+.| +-+++.++|.||||.+++-+|..+| ++++
T Consensus 41 ~GyTv~aP~ypGHG~~~e~----f---l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~i 111 (243)
T COG1647 41 NGYTVYAPRYPGHGTLPED----F---LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKI 111 (243)
T ss_pred CCceEecCCCCCCCCCHHH----H---hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccce
Confidence 6899999999999998521 1 2367888888877665555 4678999999999999999999999 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|.++++.... .. +..++.+....++.+ .+. ....+.+.+-+ ..+... ....
T Consensus 112 v~m~a~~~~k---~~----~~iie~~l~y~~~~k----k~e-~k~~e~~~~e~---------------~~~~~~--~~~~ 162 (243)
T COG1647 112 VPMCAPVNVK---SW----RIIIEGLLEYFRNAK----KYE-GKDQEQIDKEM---------------KSYKDT--PMTT 162 (243)
T ss_pred eeecCCcccc---cc----hhhhHHHHHHHHHhh----hcc-CCCHHHHHHHH---------------HHhhcc--hHHH
Confidence 9999865431 11 111222211111100 000 01111111111 011000 0011
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccC-CCCccEEEcCCCCCCCC-CCChhhHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNF-DSVEDFIVLPNVGHCPQ-DEAPHLVNPLV 238 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~~~l 238 (261)
...+..++.. ....+..|..|++++.|++|.++|.+.+.. +... ....++.+++++||..- .++.|.+.+.+
T Consensus 163 ~~~~~~~i~~-----~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 163 TAQLKKLIKD-----ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHH-----HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHH
Confidence 1111122211 124478899999999999999999998765 4444 33468999999999954 56678999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
..||++
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999963
No 53
>PRK10985 putative hydrolase; Provisional
Probab=99.79 E-value=8.8e-18 Score=143.39 Aligned_cols=216 Identities=14% Similarity=0.108 Sum_probs=115.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc--c
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT---FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI--C 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~---~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~--v 78 (261)
..+|+|+++|+||||.|....++ .|. .++....+..+.++++..+++++||||||.++..++..+++. +
T Consensus 85 ~~G~~v~~~d~rG~g~~~~~~~~------~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 85 KRGWLGVVMHFRGCSGEPNRLHR------IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HCCCEEEEEeCCCCCCCccCCcc------eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 46899999999999977432111 122 233222222233334567899999999999999998887654 8
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHH--------
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE-------- 150 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 150 (261)
.++|+++++......... ..+.+...+...+. ..+. ..+.+.+.. +......+.+.+.
T Consensus 159 ~~~v~i~~p~~~~~~~~~--~~~~~~~~~~~~l~---------~~l~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f 224 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYR--MEQGFSRVYQRYLL---------NLLK--ANAARKLAA-YPGTLPINLAQLKSVRRLREF 224 (324)
T ss_pred cEEEEEcCCCCHHHHHHH--HhhhHHHHHHHHHH---------HHHH--HHHHHHHHh-ccccccCCHHHHhcCCcHHHH
Confidence 999999876432211000 00000000110000 0000 000000111 1110011111111
Q ss_pred --HHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 151 --KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
.+..+..-......++ .. .. ..+.+++|++||++|+|++|++++.+....+.+..++.++.+++++||++++
T Consensus 225 d~~~~~~~~g~~~~~~~y---~~--~~-~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~ 298 (324)
T PRK10985 225 DDLITARIHGFADAIDYY---RQ--CS-ALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFV 298 (324)
T ss_pred hhhheeccCCCCCHHHHH---HH--CC-hHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeC
Confidence 1111100011111111 11 11 1245789999999999999999988776656566777899999999999998
Q ss_pred CCh-----hhHHHHHHHHHHhc
Q 024900 229 EAP-----HLVNPLVESFVTRH 245 (261)
Q Consensus 229 e~p-----~~~~~~l~~fl~~~ 245 (261)
|-. --..+.+.+|+...
T Consensus 299 ~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 299 GGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCCCCCccHHHHHHHHHHHh
Confidence 742 24556666777543
No 54
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.78 E-value=1.7e-18 Score=140.37 Aligned_cols=218 Identities=22% Similarity=0.280 Sum_probs=130.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
..+|-||++|.+|||.|+.-.. ..-+++..++|+..+.+... .-+.+|.||||||.|++.+++++|+.
T Consensus 80 ~~g~~v~a~D~~GhG~SdGl~~------yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~ 153 (313)
T KOG1455|consen 80 KSGFAVYAIDYEGHGRSDGLHA------YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF 153 (313)
T ss_pred hCCCeEEEeeccCCCcCCCCcc------cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc
Confidence 4689999999999999985321 23478899999998887543 23699999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh-ccC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL-QPG 156 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (261)
-+|+|++.+.-+..+-.+. .+....+..++..--. .++...+.... .. .-.+++...... ++.
T Consensus 154 w~G~ilvaPmc~i~~~~kp----~p~v~~~l~~l~~liP---~wk~vp~~d~~----~~-----~~kdp~~r~~~~~npl 217 (313)
T KOG1455|consen 154 WDGAILVAPMCKISEDTKP----HPPVISILTLLSKLIP---TWKIVPTKDII----DV-----AFKDPEKRKILRSDPL 217 (313)
T ss_pred cccceeeecccccCCccCC----CcHHHHHHHHHHHhCC---ceeecCCcccc----cc-----ccCCHHHHHHhhcCCc
Confidence 9999998875433211111 1112222222211000 00000110000 00 000111111111 111
Q ss_pred CCCc--hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccC-CCCccEEEcCCCCCCCCC-CCh
Q 024900 157 LETG--AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNF-DSVEDFIVLPNVGHCPQD-EAP 231 (261)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~-~~~~~~~~i~~~gH~~~~-e~p 231 (261)
...+ ...+..++..... . ....+.++++|.+|+||+.|.++.+..++.+ ... -.+.++.++||.-|.++. |-+
T Consensus 218 ~y~g~pRl~T~~ElLr~~~-~-le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~ 295 (313)
T KOG1455|consen 218 CYTGKPRLKTAYELLRVTA-D-LEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPD 295 (313)
T ss_pred eecCCccHHHHHHHHHHHH-H-HHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCc
Confidence 1111 2233333332111 1 1345789999999999999999999988764 433 456799999999999885 333
Q ss_pred ---hhHHHHHHHHHHhc
Q 024900 232 ---HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ---~~~~~~l~~fl~~~ 245 (261)
+.+...|.+||+++
T Consensus 296 en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 296 ENVEIVFGDIISWLDER 312 (313)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 44566677888764
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.77 E-value=1.4e-17 Score=143.73 Aligned_cols=226 Identities=18% Similarity=0.257 Sum_probs=120.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHH----HHHHhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LND----FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~d-l~~----~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
..+|+|+++|++|+|.|+.. +++++++.+ +.+ +++..+.++++++||||||.+++.+++.+|++|
T Consensus 92 ~~G~~V~~~D~~g~g~s~~~----------~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v 161 (350)
T TIGR01836 92 ERGQDVYLIDWGYPDRADRY----------LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKI 161 (350)
T ss_pred HCCCeEEEEeCCCCCHHHhc----------CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchhe
Confidence 46899999999999988632 466777543 433 444456789999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCC-CCCchh-hHHHHHHhhhhh--hhHHHHHhhcChH-HHHHHHHhhcCCCCCCcHHHHHHH-
Q 024900 79 RGMILLNISLRMLHIKKQP-WYGRPL-IRSFQNLLRNTA--AGKLFYKMVATSE-SVRNILCQCYNDTSQVTEELVEKI- 152 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 152 (261)
+++|+++++.......... ...+.. ...........+ .....|..+.... ...+....... ..+++.+..+
T Consensus 162 ~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~ 238 (350)
T TIGR01836 162 KNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDI---LEDERKVENFL 238 (350)
T ss_pred eeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHh---cCChHHHHHHH
Confidence 9999998765331100000 000000 000000000000 0000011110000 00000000000 0011111111
Q ss_pred -----hccCCCCchHHHHHHHHh--hc-----CCCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--Cc
Q 024900 153 -----LQPGLETGAADVFLEFIC--YS-----GGPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VE 214 (261)
Q Consensus 153 -----~~~~~~~~~~~~~~~~~~--~~-----~~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~ 214 (261)
...... .....+.++.. +. .+.. ....+++++||+++++|++|.++|++..+.+.+..+ ..
T Consensus 239 ~~~~w~~d~~~-~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~ 317 (350)
T TIGR01836 239 RMEKWIFDSPD-QAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDY 317 (350)
T ss_pred HHHHHhcCCcC-ccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCe
Confidence 111111 01111111110 00 0000 012367899999999999999999887776655433 34
Q ss_pred cEEEcCCCCCCCCCCC---hhhHHHHHHHHHHh
Q 024900 215 DFIVLPNVGHCPQDEA---PHLVNPLVESFVTR 244 (261)
Q Consensus 215 ~~~~i~~~gH~~~~e~---p~~~~~~l~~fl~~ 244 (261)
++++++ +||+..+.. ++++.+.+.+|+.+
T Consensus 318 ~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 318 TELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred EEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 566665 799987654 47888999999875
No 56
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.72 E-value=1.4e-16 Score=153.98 Aligned_cols=236 Identities=18% Similarity=0.207 Sum_probs=130.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCeEEEEcChhHHHHHHHHhhC-ccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVME-PEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~ 79 (261)
..+|+|+++| +|.|+++.. ...+++.+++..+.+.++. +..++++++||||||.+++.+|+.+ |++|+
T Consensus 97 ~~g~~v~~~d---~G~~~~~~~-----~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~ 168 (994)
T PRK07868 97 RAGLDPWVID---FGSPDKVEG-----GMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIA 168 (994)
T ss_pred HCCCEEEEEc---CCCCChhHc-----CccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccc
Confidence 4579999999 687775421 1235788887777666554 4457999999999999999999865 56899
Q ss_pred ceEEeecchhhhhh-c-cCC--C--CCchh-hHHHHHHhhhh-hhhHHHHHhhcCh---HHHHHHHHhhcCCCCCCcHHH
Q 024900 80 GMILLNISLRMLHI-K-KQP--W--YGRPL-IRSFQNLLRNT-AAGKLFYKMVATS---ESVRNILCQCYNDTSQVTEEL 148 (261)
Q Consensus 80 ~lv~~~~~~~~~~~-~-~~~--~--~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 148 (261)
++|+++++.-.... . ..+ . ....+ ...+.....-+ ......|+.+... ......+..........+++.
T Consensus 169 ~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~ 248 (994)
T PRK07868 169 SIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQ 248 (994)
T ss_pred eEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchh
Confidence 99998876422100 0 000 0 00000 00000000000 0001111111110 001111111111111122333
Q ss_pred HHHHhccC-C-C-Cc-h-HHHHHHHHhh---cCCCCc----cccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccE
Q 024900 149 VEKILQPG-L-E-TG-A-ADVFLEFICY---SGGPLP----EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF 216 (261)
Q Consensus 149 ~~~~~~~~-~-~-~~-~-~~~~~~~~~~---~~~~~~----~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 216 (261)
++.+.... + . .+ . .+....+... ..+... ...+++|++|+|+|+|++|.++|++..+.+.+..+++++
T Consensus 249 ~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~ 328 (994)
T PRK07868 249 QRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEV 328 (994)
T ss_pred hHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeE
Confidence 33322111 1 1 11 1 1111222211 001000 124789999999999999999999988877777777887
Q ss_pred -EEcCCCCCCCCC---CChhhHHHHHHHHHHhcCC
Q 024900 217 -IVLPNVGHCPQD---EAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 217 -~~i~~~gH~~~~---e~p~~~~~~l~~fl~~~~~ 247 (261)
..++++||+.++ .-|+++...|.+||+++..
T Consensus 329 ~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 329 YESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 688999999875 5688899999999987543
No 57
>PLN02872 triacylglycerol lipase
Probab=99.70 E-value=4.7e-16 Score=135.15 Aligned_cols=235 Identities=14% Similarity=0.164 Sum_probs=125.1
Q ss_pred CCCeEEEecCCCCCCCCC-CCCC-CCCCCCCCCHHHHH-HHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 5 KSHRVYSIDLIGYGYSDK-PNPR-DFFDKPFYTFETWA-SQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~-~~~~-~~~~~~~~~~~~~a-~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
.+|+|+.+|+||+|.|.. .... .....-.+++.+++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+
T Consensus 106 ~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 106 HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 589999999999886632 1000 00001147899998 7999999886 347899999999999999544 6777
Q ss_pred -cccceEEeecchhhhhhccCCCCCchhhHHH-----HHH---hhhh------hhhHHHHHhhcChHH-HHHHHHhhcCC
Q 024900 77 -ICRGMILLNISLRMLHIKKQPWYGRPLIRSF-----QNL---LRNT------AAGKLFYKMVATSES-VRNILCQCYND 140 (261)
Q Consensus 77 -~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~ 140 (261)
+|+.++++++.....+.. .++...+ ..+ +... .....+...++.... -...+....+.
T Consensus 185 ~~v~~~~~l~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~ 258 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVT------APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGT 258 (395)
T ss_pred HHHHHHHHhcchhhhccCC------CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCC
Confidence 688888888764432111 1111000 000 0000 000000111111000 00000000010
Q ss_pred CCCCcHHHHHHHhccCCCCchHHHHH--------------------HHHhhcCCCCccccCCCC--CCCEEEEecCCCCC
Q 024900 141 TSQVTEELVEKILQPGLETGAADVFL--------------------EFICYSGGPLPEELLPQV--KCPVLIAWGDKDPW 198 (261)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~ 198 (261)
...+....+..++....-........ ....+.....+.-.+.+| ++|+++++|++|.+
T Consensus 259 ~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~l 338 (395)
T PLN02872 259 NCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGL 338 (395)
T ss_pred CcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCC
Confidence 01112211111111000000000000 111122112222246777 68999999999999
Q ss_pred CCchhhhhhcc-CCCCccEEEcCCCCCC---CCCCChhhHHHHHHHHHHhcC
Q 024900 199 EPIELGRAYGN-FDSVEDFIVLPNVGHC---PQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 199 ~~~~~~~~~~~-~~~~~~~~~i~~~gH~---~~~e~p~~~~~~l~~fl~~~~ 246 (261)
++++..+.+.+ +.+..+++.++++||. ...|.|+++++.|.+|+++..
T Consensus 339 v~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 339 ADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 98876555444 4443688899999995 566999999999999998643
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.69 E-value=1.2e-15 Score=120.15 Aligned_cols=159 Identities=11% Similarity=0.020 Sum_probs=104.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||. ++++++.+++++++.++++++||||||.+++.+|..+|. .+|++
T Consensus 31 ~~~~v~~~dl~g~~~------------------~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~ 89 (190)
T PRK11071 31 PDIEMIVPQLPPYPA------------------DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVV 89 (190)
T ss_pred CCCeEEeCCCCCCHH------------------HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEE
Confidence 379999999999851 356788889999999999999999999999999999983 46788
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHH
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
+++... .+.+........ . + ..++.-.++.+.+..
T Consensus 90 ~~~~~~-------------~~~~~~~~~~~~------~----~---------~~~~~~~~~~~~~~d------------- 124 (190)
T PRK11071 90 NPAVRP-------------FELLTDYLGENE------N----P---------YTGQQYVLESRHIYD------------- 124 (190)
T ss_pred CCCCCH-------------HHHHHHhcCCcc------c----c---------cCCCcEEEcHHHHHH-------------
Confidence 874321 011111110000 0 0 000000011111111
Q ss_pred HHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
...+ .. ..+. .++||++|+|++|.++|.+.+..+.+ +++.+.++|++|.. ...+++.+.+.+|++
T Consensus 125 ---~~~~---~~--~~i~-~~~~v~iihg~~De~V~~~~a~~~~~---~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 125 ---LKVM---QI--DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA---ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ---HHhc---CC--ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH---hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 1111 11 1233 78899999999999999998766544 35677889999996 455888888988874
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.66 E-value=4.4e-16 Score=124.48 Aligned_cols=211 Identities=21% Similarity=0.335 Sum_probs=118.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhh--Ccccccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM--EPEICRG 80 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~--~p~~v~~ 80 (261)
+.+|+++|+||||.|.-.+. ...+.+.++.|+..+++++-. .+++||||||||.||...|.. -|. +.|
T Consensus 102 ~~r~~a~DlRgHGeTk~~~e------~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVENE------DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ceeEEEeeccccCccccCCh------hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhc
Confidence 47889999999999964332 347899999999999988853 479999999999999888875 476 999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc---CCCCCCcH-HHHHHHhccC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY---NDTSQVTE-ELVEKILQPG 156 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~ 156 (261)
|+++|..=.. ........+..+++.+. .|+++.. .+...+.... .+..+++- ..+... ..+
T Consensus 175 l~viDVVEgt---------AmeAL~~m~~fL~~rP~---~F~Si~~--Ai~W~v~sg~~Rn~~SArVsmP~~~~~~-~eG 239 (343)
T KOG2564|consen 175 LVVIDVVEGT---------AMEALNSMQHFLRNRPK---SFKSIED--AIEWHVRSGQLRNRDSARVSMPSQLKQC-EEG 239 (343)
T ss_pred eEEEEEechH---------HHHHHHHHHHHHhcCCc---cccchhh--HHHHHhccccccccccceEecchheeec-cCC
Confidence 9999863100 00011111222222110 1111110 0000000000 00000110 000000 000
Q ss_pred --------C---CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 157 --------L---ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 157 --------~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
+ ..-+..+|.. + .+.+-...+|-++|-..-|.. ..+. ...++.-.-++.+++.+||+
T Consensus 240 h~yvwrtdL~kte~YW~gWF~g--------L-S~~Fl~~p~~klLilAg~d~L-DkdL--tiGQMQGk~Q~~vL~~~GH~ 307 (343)
T KOG2564|consen 240 HCYVWRTDLEKTEQYWKGWFKG--------L-SDKFLGLPVPKLLILAGVDRL-DKDL--TIGQMQGKFQLQVLPLCGHF 307 (343)
T ss_pred CcEEEEeeccccchhHHHHHhh--------h-hhHhhCCCccceeEEeccccc-Ccce--eeeeeccceeeeeecccCce
Confidence 0 0001111111 0 122335678877777776764 3222 13344333588999999999
Q ss_pred CCCCChhhHHHHHHHHHHhcCCCCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHATPPA 250 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~~~~ 250 (261)
.|++.|..++..+..|+..+.-.++
T Consensus 308 v~ED~P~kva~~~~~f~~Rn~~~~~ 332 (343)
T KOG2564|consen 308 VHEDSPHKVAECLCVFWIRNRFAEP 332 (343)
T ss_pred eccCCcchHHHHHHHHHhhhccccc
Confidence 9999999999999999987654333
No 60
>PRK13604 luxD acyl transferase; Provisional
Probab=99.65 E-value=3.7e-15 Score=123.80 Aligned_cols=191 Identities=11% Similarity=0.071 Sum_probs=104.5
Q ss_pred CCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~---~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
..+|.|+.||.||+ |.|+..- ..++.....+|+. ++++..+.+++.|+||||||.+|+..|...+ ++
T Consensus 62 ~~G~~vLrfD~rg~~GeS~G~~-------~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~ 132 (307)
T PRK13604 62 SNGFHVIRYDSLHHVGLSSGTI-------DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LS 132 (307)
T ss_pred HCCCEEEEecCCCCCCCCCCcc-------ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CC
Confidence 46899999999988 9996421 1123333456664 4444445678999999999999977776443 88
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCc-HHHHHHHhccCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKILQPGLE 158 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (261)
.+|+.++..... ..+...+...- . .+.....+.... + ....+. ...++....-.+
T Consensus 133 ~lI~~sp~~~l~-------------d~l~~~~~~~~-~--~~p~~~lp~~~d------~-~g~~l~~~~f~~~~~~~~~- 188 (307)
T PRK13604 133 FLITAVGVVNLR-------------DTLERALGYDY-L--SLPIDELPEDLD------F-EGHNLGSEVFVTDCFKHGW- 188 (307)
T ss_pred EEEEcCCcccHH-------------HHHHHhhhccc-c--cCcccccccccc------c-ccccccHHHHHHHHHhcCc-
Confidence 888777643211 00110000000 0 000000000000 0 000000 011111100000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CC-CCccEEEcCCCCCCCCCCChhhHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FD-SVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~-~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.....+.+.++.+++|+|+|||+.|.++|.+.++.+.+ .. ..++++++||++|.... ++-
T Consensus 189 -------------~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~---- 250 (307)
T PRK13604 189 -------------DTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLV---- 250 (307)
T ss_pred -------------cccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc-chH----
Confidence 00000113356788999999999999999998866544 42 46899999999999654 332
Q ss_pred HHHHHHHhc
Q 024900 237 LVESFVTRH 245 (261)
Q Consensus 237 ~l~~fl~~~ 245 (261)
.+++|.++.
T Consensus 251 ~~~~~~~~~ 259 (307)
T PRK13604 251 VLRNFYQSV 259 (307)
T ss_pred HHHHHHHHH
Confidence 566676653
No 61
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.62 E-value=1.5e-14 Score=118.03 Aligned_cols=223 Identities=17% Similarity=0.235 Sum_probs=119.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.++|.|+-+|.||+..-..+.+.+ ...-|+++++++|.+++++++++.++-+|--.|+.|-.++|..||++|.|||
T Consensus 52 i~~~f~i~Hi~aPGqe~ga~~~p~~---y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLi 128 (283)
T PF03096_consen 52 ILQNFCIYHIDAPGQEEGAATLPEG---YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLI 128 (283)
T ss_dssp HHTTSEEEEEE-TTTSTT-----TT--------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhhceEEEEEeCCCCCCCccccccc---ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEE
Confidence 5578999999999997765433321 2345899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC-CcHHHHHHH---hccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKI---LQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 158 (261)
++++.....+ +.+++..-+....+ .+. ..+.......+...|+.... ...+.++.+ +.....
T Consensus 129 Lvn~~~~~~g----------w~Ew~~~K~~~~~L---~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~N 194 (283)
T PF03096_consen 129 LVNPTCTAAG----------WMEWFYQKLSSWLL---YSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERIN 194 (283)
T ss_dssp EES---S-------------HHHHHHHHHH-----------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TT
T ss_pred EEecCCCCcc----------HHHHHHHHHhcccc---ccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCC
Confidence 9997644321 12222111110000 000 00000000001111110000 011223222 221111
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
+.-...|...+..+ .++ ....+...||||+|.|+..+... +..+...++ +..+++..+++||=++.+|+|+++++.
T Consensus 195 p~Nl~~f~~sy~~R-~DL-~~~~~~~~c~vLlvvG~~Sp~~~-~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea 271 (283)
T PF03096_consen 195 PKNLALFLNSYNSR-TDL-SIERPSLGCPVLLVVGDNSPHVD-DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEA 271 (283)
T ss_dssp HHHHHHHHHHHHT-------SECTTCCS-EEEEEETTSTTHH-HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhcc-ccc-hhhcCCCCCCeEEEEecCCcchh-hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHH
Confidence 11222332222211 112 23356677999999999998754 233444555 345789999999999999999999999
Q ss_pred HHHHHHhc
Q 024900 238 VESFVTRH 245 (261)
Q Consensus 238 l~~fl~~~ 245 (261)
++=|++..
T Consensus 272 ~~lFlQG~ 279 (283)
T PF03096_consen 272 FKLFLQGM 279 (283)
T ss_dssp HHHHHHHT
T ss_pred HHHHHccC
Confidence 99999753
No 62
>PRK10566 esterase; Provisional
Probab=99.61 E-value=2.5e-14 Score=117.45 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=44.2
Q ss_pred CCCC-CCCEEEEecCCCCCCCchhhhhhccCCC------CccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 181 LPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 181 l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.++ ++|+|+|+|++|..+|++.++.+.+..+ +.++.+++++||... |+ ..+.+.+||+++
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHHhh
Confidence 4555 7999999999999999987665543211 246778899999853 55 456666798864
No 63
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.59 E-value=3e-13 Score=109.22 Aligned_cols=224 Identities=18% Similarity=0.263 Sum_probs=136.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.++|.|+-+|.|||=.-....+.+ ...-++++++++|..++++++.+.++-+|---|+.|-.++|+.||++|-+||
T Consensus 75 i~~~fcv~HV~~PGqe~gAp~~p~~---y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 75 ILEHFCVYHVDAPGQEDGAPSFPEG---YPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred HHhheEEEecCCCccccCCccCCCC---CCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 3467999999999996554333322 2355899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC-CcHHHHHHH---hccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKI---LQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 158 (261)
+++......+ |..+.+.+....+++...+ +......++...|+.... -..+.++.+ +.....
T Consensus 152 LIn~~~~a~g-----wiew~~~K~~s~~l~~~Gm---------t~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N 217 (326)
T KOG2931|consen 152 LINCDPCAKG-----WIEWAYNKVSSNLLYYYGM---------TQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLN 217 (326)
T ss_pred EEecCCCCch-----HHHHHHHHHHHHHHHhhch---------hhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCC
Confidence 9997543321 1111111111111211111 000001112222221100 122333332 222222
Q ss_pred CchHHHHHHHHhhcCCCCc--cc-cCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhH
Q 024900 159 TGAADVFLEFICYSGGPLP--EE-LLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~-~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
+.-...|...+..+ .++. +. ....++||||+|.|++.+.+... .+.-.++ ..++.+..+.+||=.+++++|.++
T Consensus 218 ~~Nl~~fl~ayn~R-~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl 295 (326)
T KOG2931|consen 218 PKNLALFLNAYNGR-RDLSIERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQPGKL 295 (326)
T ss_pred hhHHHHHHHHhcCC-CCccccCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccCchHH
Confidence 23334443322211 1111 11 12266799999999998875422 2222333 345788999999999999999999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
.+.++-|++-.
T Consensus 296 ~ea~~~FlqG~ 306 (326)
T KOG2931|consen 296 AEAFKYFLQGM 306 (326)
T ss_pred HHHHHHHHccC
Confidence 99999999753
No 64
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.5e-13 Score=114.96 Aligned_cols=237 Identities=19% Similarity=0.193 Sum_probs=133.1
Q ss_pred CCCeEEEecCCCCC-CCCCCCCC-CC-----CCCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHHHHhhCcc
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPR-DF-----FDKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~-~~-----~~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+|.||+.|-.|.+ .|..|..- +. ..-..+|+.++++-...++++||++++. +||-||||+.+++++..|||
T Consensus 91 ~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 91 ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 56999999999986 44333211 11 1123579999999888899999999966 99999999999999999999
Q ss_pred cccceEEeecchhhhh------------hc-cCCCCCchhhHH--HHHHhhhhhhhHHH-HHhhcChHHHHHHHHhhc-C
Q 024900 77 ICRGMILLNISLRMLH------------IK-KQPWYGRPLIRS--FQNLLRNTAAGKLF-YKMVATSESVRNILCQCY-N 139 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~------------~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 139 (261)
+|++++.+.++.+... +. +..|.+..+... -...++ ..+.+ .-...+++.+.+.+.... .
T Consensus 171 ~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~---~AR~l~~ltYrS~~~~~~rF~r~~~~ 247 (368)
T COG2021 171 RVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLR---LARMLAHLTYRSEEELDERFGRRLQA 247 (368)
T ss_pred HHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHH---HHHHHHHHHccCHHHHHHHhcccccc
Confidence 9999999987654210 00 001100000000 000000 00000 000112222211111100 0
Q ss_pred CCCCC--cHHHHHHHhccCC----CCchHHHHHHHH-hhcCCCCcc------ccCCCCCCCEEEEecCCCCCCCchhhhh
Q 024900 140 DTSQV--TEELVEKILQPGL----ETGAADVFLEFI-CYSGGPLPE------ELLPQVKCPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 140 ~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~------~~l~~i~~Pvlii~G~~D~~~~~~~~~~ 206 (261)
+.... ....++.+++... ..-....|+.+. ++...+..+ +.|++|++|+|++.=+.|...|++..+.
T Consensus 248 ~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~ 327 (368)
T COG2021 248 DPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA 327 (368)
T ss_pred cccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH
Confidence 00000 0122233222110 000011111111 111111111 2478999999999999999999988777
Q ss_pred hccCCCCcc-EEEc-CCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 207 YGNFDSVED-FIVL-PNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 207 ~~~~~~~~~-~~~i-~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+.+..+.+. +..| ...||-.++...+.+.+.|..||+.
T Consensus 328 ~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 328 LAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 666544444 5444 6779999999999999999999964
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=3.8e-14 Score=112.98 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=106.9
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|++||.+|+|.|...+.+ .+..+-++-+.+.+++-. .++++|.|+|+|....+.+|+++| +++||+
T Consensus 88 n~nv~~~DYSGyG~S~G~psE-------~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSE-------RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCccc-------ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 789999999999999753221 111111222334444433 478999999999999999999999 999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
.++-.... +.+. .-..+ . + + .+
T Consensus 159 ~SPf~S~~-----------------rv~~---------~~~~~---------~-~---------~-------------~d 180 (258)
T KOG1552|consen 159 HSPFTSGM-----------------RVAF---------PDTKT---------T-Y---------C-------------FD 180 (258)
T ss_pred eccchhhh-----------------hhhc---------cCcce---------E-E---------e-------------ec
Confidence 88632110 0000 00000 0 0 0 00
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
.|. .-+.++.|+|||||++|++|.+++...+..+-+. ...-+..++.|+||.-..- ..++-..++.|+
T Consensus 181 ~f~----------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~-~~~yi~~l~~f~ 249 (258)
T KOG1552|consen 181 AFP----------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL-YPEYIEHLRRFI 249 (258)
T ss_pred ccc----------ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc-CHHHHHHHHHHH
Confidence 000 0134678999999999999999999887664433 3223678999999996554 445777888898
Q ss_pred HhcCCC
Q 024900 243 TRHATP 248 (261)
Q Consensus 243 ~~~~~~ 248 (261)
......
T Consensus 250 ~~~~~~ 255 (258)
T KOG1552|consen 250 SSVLPS 255 (258)
T ss_pred HHhccc
Confidence 765544
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=2.4e-13 Score=107.74 Aligned_cols=202 Identities=17% Similarity=0.136 Sum_probs=117.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhcCCCeEEEEcChhHHHHHHHHhhCcc---c
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK-DVVKDQAFFICNSIGGLVGLQAAVMEPE---I 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~-~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~ 77 (261)
.|+....++++.+||+|.--.- ....+++.+++.|..-+. -+...++.++||||||+||+++|.+... .
T Consensus 29 ~lp~~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 29 RLPADIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hCCchhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 3566789999999999976321 134689999999887776 3445689999999999999999986422 2
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
..++.+.+.........+.. ....- ..+...+.+. ....++.+ .++|.+..++ |.+
T Consensus 102 p~~lfisg~~aP~~~~~~~i-~~~~D-~~~l~~l~~l--------gG~p~e~l-------------ed~El~~l~L-Pil 157 (244)
T COG3208 102 PRALFISGCRAPHYDRGKQI-HHLDD-ADFLADLVDL--------GGTPPELL-------------EDPELMALFL-PIL 157 (244)
T ss_pred cceEEEecCCCCCCcccCCc-cCCCH-HHHHHHHHHh--------CCCChHHh-------------cCHHHHHHHH-HHH
Confidence 55666555432211000000 00000 1111111100 00000000 1123322221 111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
..++.......-.. -..++||+.++.|++|..+..+.....++. -..-++..++| ||+...++.+++.+
T Consensus 158 -------RAD~~~~e~Y~~~~--~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~ 227 (244)
T COG3208 158 -------RADFRALESYRYPP--PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLA 227 (244)
T ss_pred -------HHHHHHhcccccCC--CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHH
Confidence 11222222211111 256899999999999999888765534433 33457888976 99999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+.+..
T Consensus 228 ~i~~~l~~ 235 (244)
T COG3208 228 RLEQHLAH 235 (244)
T ss_pred HHHHHhhh
Confidence 99988864
No 67
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.51 E-value=9.6e-14 Score=111.44 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=106.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+++|.|+.+|.||.+.......... ..... ...++|+.+.++.+ ..+++.++|||+||++++.++..+|++
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~--~~~~~-~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~ 88 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAG--RGDWG-QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDR 88 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTT--TTGTT-HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCG
T ss_pred hCCEEEEEEcCCCCCccchhHHHhh--hcccc-ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccccee
Confidence 6899999999999884321100000 00111 22355566555555 235799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|..++...... . ......+.. . ... .++... ..++..+.
T Consensus 89 f~a~v~~~g~~d~~~-----~--~~~~~~~~~-------~--------------~~~--~~~~~~-~~~~~~~~------ 131 (213)
T PF00326_consen 89 FKAAVAGAGVSDLFS-----Y--YGTTDIYTK-------A--------------EYL--EYGDPW-DNPEFYRE------ 131 (213)
T ss_dssp SSEEEEESE-SSTTC-----S--BHHTCCHHH-------G--------------HHH--HHSSTT-TSHHHHHH------
T ss_pred eeeeeccceecchhc-----c--ccccccccc-------c--------------ccc--ccCccc-hhhhhhhh------
Confidence 999988876432110 0 000000000 0 000 001100 01111111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCC--CCCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCC-CCC
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQ--VKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQ-DEA 230 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~-~e~ 230 (261)
.... ..+.+ +++|+|+++|++|..+|++.+.. +.+.....++.++|++||... -+.
T Consensus 132 ----------~s~~-------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~ 194 (213)
T PF00326_consen 132 ----------LSPI-------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPEN 194 (213)
T ss_dssp ----------HHHG-------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHH
T ss_pred ----------hccc-------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchh
Confidence 1110 11222 78999999999999999886543 344444479999999999544 455
Q ss_pred hhhHHHHHHHHHHhcC
Q 024900 231 PHLVNPLVESFVTRHA 246 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~ 246 (261)
..+..+.+.+|++++.
T Consensus 195 ~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 195 RRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677888889998765
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.51 E-value=7.7e-14 Score=114.97 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=64.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~---~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.+|+|+++|+||||.|.... ..+++..+++|+..++ ++.+.++++|+||||||.+++.+|..+|++++++
T Consensus 55 ~Gy~Vl~~Dl~G~G~S~g~~-------~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~l 127 (266)
T TIGR03101 55 GGFGVLQIDLYGCGDSAGDF-------AAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRL 127 (266)
T ss_pred CCCEEEEECCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceE
Confidence 57999999999999997532 2357888888887654 4445679999999999999999999999999999
Q ss_pred EEeecc
Q 024900 82 ILLNIS 87 (261)
Q Consensus 82 v~~~~~ 87 (261)
|++++.
T Consensus 128 VL~~P~ 133 (266)
T TIGR03101 128 VLWQPV 133 (266)
T ss_pred EEeccc
Confidence 999875
No 69
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.45 E-value=3e-12 Score=99.04 Aligned_cols=191 Identities=18% Similarity=0.224 Sum_probs=112.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC---eEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ---AFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~---~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.++.++-+|.+|-|.|+... .+. .....|+|+..+++.+.... .+++|||-||-+++.+|..+++ ++-+
T Consensus 61 ~gis~fRfDF~GnGeS~gsf-----~~G--n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~v 132 (269)
T KOG4667|consen 61 EGISAFRFDFSGNGESEGSF-----YYG--NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNV 132 (269)
T ss_pred cCceEEEEEecCCCCcCCcc-----ccC--cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chhe
Confidence 56999999999999998542 112 33455799999988885432 6699999999999999999987 7777
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|-+++.....+.-. .+.++.+.+.+. .. .|.....+. ..+ .-.++++-+...+..
T Consensus 133 iNcsGRydl~~~I~-eRlg~~~l~~ik---e~-----Gfid~~~rk--------G~y--~~rvt~eSlmdrLnt------ 187 (269)
T KOG4667|consen 133 INCSGRYDLKNGIN-ERLGEDYLERIK---EQ-----GFIDVGPRK--------GKY--GYRVTEESLMDRLNT------ 187 (269)
T ss_pred EEcccccchhcchh-hhhcccHHHHHH---hC-----CceecCccc--------CCc--CceecHHHHHHHHhc------
Confidence 66655321110000 001111111110 00 000000000 000 111223222111110
Q ss_pred HHHHHHHHhhcCCCCccccC-CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELL-PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l-~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
+.....+ -..+||||-++|..|.++|.+.+..+++++++..+.+|||+.|.--..+.+ .+.+...
T Consensus 188 -------------d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~-l~~lgl~ 253 (269)
T KOG4667|consen 188 -------------DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ-LVSLGLE 253 (269)
T ss_pred -------------hhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhh-Hhhhcce
Confidence 0001111 134799999999999999999998999888889999999999996654443 3344444
Q ss_pred HH
Q 024900 241 FV 242 (261)
Q Consensus 241 fl 242 (261)
|.
T Consensus 254 f~ 255 (269)
T KOG4667|consen 254 FI 255 (269)
T ss_pred eE
Confidence 44
No 70
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.42 E-value=7.2e-13 Score=99.42 Aligned_cols=121 Identities=24% Similarity=0.373 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+.+|.|+++|+||+|.+... ....++.+++. ....+.+++.++|||+||.+++.++..+ .+++++|+
T Consensus 24 ~~G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~ 90 (145)
T PF12695_consen 24 EQGYAVVAFDYPGHGDSDGA----------DAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVL 90 (145)
T ss_dssp HTTEEEEEESCTTSTTSHHS----------HHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEE
T ss_pred HCCCEEEEEecCCCCccchh----------HHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEE
Confidence 46799999999999999431 12333333332 1112567899999999999999999988 78999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
+++.+. .
T Consensus 91 ~~~~~~---------------------------~---------------------------------------------- 97 (145)
T PF12695_consen 91 LSPYPD---------------------------S---------------------------------------------- 97 (145)
T ss_dssp ESESSG---------------------------C----------------------------------------------
T ss_pred ecCccc---------------------------h----------------------------------------------
Confidence 885100 0
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCccEEEcCCCCCC
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~ 225 (261)
+.+...++|+++++|++|..++.+..+.+ +++....++.++++++|+
T Consensus 98 ---------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ---------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 00123345999999999999998876654 444556799999999996
No 71
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.37 E-value=8.6e-11 Score=104.69 Aligned_cols=211 Identities=13% Similarity=0.126 Sum_probs=115.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHH----HHhhC
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ----AAVME 74 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~----~a~~~ 74 (261)
+.++|+||.+|.++-|.+++ ..++++|++.|.+.++.. +.++++++|+++||.++.. +|+++
T Consensus 244 v~qG~~VflIsW~nP~~~~r----------~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 244 LKNQLQVFIISWRNPDKAHR----------EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred HHcCCeEEEEeCCCCChhhc----------CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 56899999999999776652 368999998777776665 4678999999999999997 88888
Q ss_pred cc-cccceEEeecchhhhhhccC-CCCCchhhHHHHHHhh-hh-hhh---HHHHHhhcChHHHHHHHHhhc--CCCCCCc
Q 024900 75 PE-ICRGMILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLR-NT-AAG---KLFYKMVATSESVRNILCQCY--NDTSQVT 145 (261)
Q Consensus 75 p~-~v~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 145 (261)
++ +|++++++.++.-....... .+.............. .. ..+ ...|..+.....+...+...+ ++....
T Consensus 314 ~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~- 392 (560)
T TIGR01839 314 QLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPA- 392 (560)
T ss_pred CCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcch-
Confidence 86 89999999875432110000 0000001111111111 00 001 112333322222222222222 121111
Q ss_pred HHHHHHHhccCCC-Cch-HHHHHHHHhhcC----CCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-CCc
Q 024900 146 EELVEKILQPGLE-TGA-ADVFLEFICYSG----GPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVE 214 (261)
Q Consensus 146 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~----~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~ 214 (261)
..+..+.....+ ++. ...+..++.... +.. ..=.|++|+||+++|.|+.|+++|++++....++. ...
T Consensus 393 -fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~ 471 (560)
T TIGR01839 393 -FDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR 471 (560)
T ss_pred -hhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe
Confidence 113333333222 221 122333221111 111 01137899999999999999999999876665543 234
Q ss_pred cEEEcCCCCCCC
Q 024900 215 DFIVLPNVGHCP 226 (261)
Q Consensus 215 ~~~~i~~~gH~~ 226 (261)
+++.. ++||..
T Consensus 472 ~fvl~-~gGHIg 482 (560)
T TIGR01839 472 RFVLS-NSGHIQ 482 (560)
T ss_pred EEEec-CCCccc
Confidence 55444 668873
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.34 E-value=5e-12 Score=110.40 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=63.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|++|+|.|..+.. . .....+++++.++++.| ..++++||||||||.||..++..+|++|
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~a------~-~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV 144 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPTS------A-AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKV 144 (442)
T ss_pred CCCEEEEEECCCcCCCCCccc------c-ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcce
Confidence 369999999999999876531 1 23366777788887765 3579999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
.+++++|+..
T Consensus 145 ~rItgLDPAg 154 (442)
T TIGR03230 145 NRITGLDPAG 154 (442)
T ss_pred eEEEEEcCCC
Confidence 9999999864
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.28 E-value=7.9e-12 Score=96.85 Aligned_cols=182 Identities=19% Similarity=0.265 Sum_probs=109.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+..|+.++.||||+|+..+.+ ...+.-.+.+ +.-++.. +...+.++.|-|+||.+|..+|+...+++.++++
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE----~GL~lDs~av--ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSE----EGLKLDSEAV--LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred CceEEEEEeeccccCCCCccc----cceeccHHHH--HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee
Confidence 568999999999999864321 1122111111 1122222 2245799999999999999999999999999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
-++.....+ ..-+++ .+ ....++.. ++ +.+
T Consensus 180 ENTF~SIp~------~~i~~v--------~p-~~~k~i~~----------lc--~kn----------------------- 209 (300)
T KOG4391|consen 180 ENTFLSIPH------MAIPLV--------FP-FPMKYIPL----------LC--YKN----------------------- 209 (300)
T ss_pred echhccchh------hhhhee--------cc-chhhHHHH----------HH--HHh-----------------------
Confidence 886432210 000000 00 00000000 00 000
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-C-CCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-D-SVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
.+ .....+..-+.|.|+|.|..|..+|+.+.+.+-.. + ...++.++|++.|.=.+- -+-..++|.+|
T Consensus 210 ~~----------~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dF 278 (300)
T KOG4391|consen 210 KW----------LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDF 278 (300)
T ss_pred hh----------cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHH
Confidence 00 00122445678999999999999999876554333 2 345899999999995552 35578899999
Q ss_pred HHhcCC-CCCcccc
Q 024900 242 VTRHAT-PPASVSA 254 (261)
Q Consensus 242 l~~~~~-~~~~~~~ 254 (261)
|.+... +++.-++
T Consensus 279 laE~~~~~P~~~a~ 292 (300)
T KOG4391|consen 279 LAEVVKSSPEEMAK 292 (300)
T ss_pred HHHhccCChHHhCC
Confidence 987654 3444333
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.28 E-value=1.6e-10 Score=93.59 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=67.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
..+.|+|...+||||.+..++. ..|+..+...-+.++++.++++ +..++|||.||-.|+.+|..+| +.+++
T Consensus 60 ~~~iR~I~iN~PGf~~t~~~~~------~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~ 131 (297)
T PF06342_consen 60 EAGIRFIGINYPGFGFTPGYPD------QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLV 131 (297)
T ss_pred HcCeEEEEeCCCCCCCCCCCcc------cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEE
Confidence 3578999999999999987642 4588888888999999999975 6999999999999999999996 77999
Q ss_pred Eeecch
Q 024900 83 LLNISL 88 (261)
Q Consensus 83 ~~~~~~ 88 (261)
++++..
T Consensus 132 lin~~G 137 (297)
T PF06342_consen 132 LINPPG 137 (297)
T ss_pred EecCCc
Confidence 999864
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.25 E-value=3.5e-10 Score=94.38 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCeEEEecC--CCCCCCCCCC-------------CCCCCCCCCCCHHHH-HHHHHHHHHH---hcCCCeEEEEcChhHH
Q 024900 5 KSHRVYSIDL--IGYGYSDKPN-------------PRDFFDKPFYTFETW-ASQLNDFCKD---VVKDQAFFICNSIGGL 65 (261)
Q Consensus 5 ~~~~V~~~Dl--~G~G~S~~~~-------------~~~~~~~~~~~~~~~-a~dl~~~~~~---l~~~~~~lvGhS~Gg~ 65 (261)
.+|.|++||. +|+|.+.... .........|++.++ ++++..++++ ++.+++.++||||||.
T Consensus 71 ~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~ 150 (275)
T TIGR02821 71 HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGH 150 (275)
T ss_pred cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHH
Confidence 3799999998 5555432110 000000012444444 6777777776 3456899999999999
Q ss_pred HHHHHHhhCcccccceEEeecc
Q 024900 66 VGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 66 va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++.+++.+|+.+++++++++.
T Consensus 151 ~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 151 GALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHhCcccceEEEEECCc
Confidence 9999999999999999988764
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=99.24 E-value=3.6e-10 Score=94.65 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
++..+.+....+.++.++++|+||||||..++.++..+|+++++++.+++.
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 333334444444556788999999999999999999999999999988864
No 77
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.19 E-value=2.3e-09 Score=88.82 Aligned_cols=67 Identities=19% Similarity=0.295 Sum_probs=50.4
Q ss_pred cccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCC----Chh-hHHHHHHHHHHh
Q 024900 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDE----APH-LVNPLVESFVTR 244 (261)
Q Consensus 178 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~l~~fl~~ 244 (261)
...|.+|.+|+|||+..+|++++++....... .+|+..+..-+.+||...+. +|. -..+.+-+|++.
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 35689999999999999999999876444333 57778888899999998876 443 334555566654
No 78
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.18 E-value=1.7e-10 Score=99.88 Aligned_cols=229 Identities=17% Similarity=0.190 Sum_probs=124.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-----ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-----PEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~ 77 (261)
|+ ++.||..|-.--+..... ...+++++|++-|.++++.+|.+ ++++|.++||..++.+++.+ |++
T Consensus 127 l~-g~dVYl~DW~~p~~vp~~-------~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~ 197 (406)
T TIGR01849 127 LP-DHDVYITDWVNARMVPLS-------AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQ 197 (406)
T ss_pred hC-CCcEEEEeCCCCCCCchh-------cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCC
Confidence 55 899999998766644311 13579999999899999988766 99999999999988777654 778
Q ss_pred ccceEEeecchhhhhhccCCCC-----CchhhHHHHHHhhh------------hhhhH---HHHHhhcCh---HHHHHHH
Q 024900 78 CRGMILLNISLRMLHIKKQPWY-----GRPLIRSFQNLLRN------------TAAGK---LFYKMVATS---ESVRNIL 134 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------------~~~~~---~~~~~~~~~---~~~~~~~ 134 (261)
+++++++.++.-.. ..+.. ...-++.+...+.. ...+. .-|...... ......+
T Consensus 198 ~~sltlm~~PID~~---~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~ 274 (406)
T TIGR01849 198 PRSMTLMGGPIDAR---ASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFF 274 (406)
T ss_pred cceEEEEecCccCC---CCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHH
Confidence 99999998764321 11100 00001112211100 00000 011111110 0011111
Q ss_pred HhhcCCCCCCcHHHHHHHhc---cCCCCchHHHHHHHHh--hcC-----CCCc----cccCCCCC-CCEEEEecCCCCCC
Q 024900 135 CQCYNDTSQVTEELVEKILQ---PGLETGAADVFLEFIC--YSG-----GPLP----EELLPQVK-CPVLIAWGDKDPWE 199 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~-----~~~~----~~~l~~i~-~Pvlii~G~~D~~~ 199 (261)
.... .......+....+.+ ..+.. ....+.++.. +.. +.+. .=.+++|+ ||+|.|-|++|.++
T Consensus 275 ~~l~-~gd~~~~~~~~~f~~~y~d~~dl-pge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~ 352 (406)
T TIGR01849 275 LHLV-KGDGQEADKHRIFYDEYLAVMDM-TAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDIS 352 (406)
T ss_pred HHHh-cCCcchHHHHHHHHHHhhhccCC-cHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcC
Confidence 1110 011111111111111 11111 1122222210 110 1110 11367899 99999999999999
Q ss_pred CchhhhhhccC---CC--CccEEEcCCCCCCCCC---CChhhHHHHHHHHHHhc
Q 024900 200 PIELGRAYGNF---DS--VEDFIVLPNVGHCPQD---EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 200 ~~~~~~~~~~~---~~--~~~~~~i~~~gH~~~~---e~p~~~~~~l~~fl~~~ 245 (261)
|+...+.+..+ .+ ..+....+++||.-.+ .-++++...|.+||.++
T Consensus 353 p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 353 GLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred CHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 99887655443 22 2346677899999665 44678889999999763
No 79
>PRK11460 putative hydrolase; Provisional
Probab=99.14 E-value=1.3e-09 Score=88.65 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=34.0
Q ss_pred CCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCCCC
Q 024900 185 KCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~~ 228 (261)
++|+++++|++|+++|.+.++.+. +.....+++.++++||....
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~ 195 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP 195 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH
Confidence 579999999999999988765433 23334678888999999753
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.12 E-value=1.2e-09 Score=99.91 Aligned_cols=78 Identities=21% Similarity=0.119 Sum_probs=62.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
++++|.|+++|+||+|.|+... ..++ ...++|+.++++.+.. +++.++|||+||.+++.+|+.+|++
T Consensus 50 ~~~Gy~vv~~D~RG~g~S~g~~-------~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~ 121 (550)
T TIGR00976 50 VAQGYAVVIQDTRGRGASEGEF-------DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA 121 (550)
T ss_pred HhCCcEEEEEeccccccCCCce-------EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc
Confidence 3679999999999999998532 1122 4456777777776633 4899999999999999999999999
Q ss_pred ccceEEeecch
Q 024900 78 CRGMILLNISL 88 (261)
Q Consensus 78 v~~lv~~~~~~ 88 (261)
++++|..++..
T Consensus 122 l~aiv~~~~~~ 132 (550)
T TIGR00976 122 LRAIAPQEGVW 132 (550)
T ss_pred eeEEeecCccc
Confidence 99999887654
No 81
>PLN00021 chlorophyllase
Probab=99.10 E-value=1.8e-09 Score=91.35 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=48.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----H-------hcCCCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK----D-------VVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~----~-------l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.+|.|+++|++|++.+... ..+++ ++++.+++. . .+.+++.++||||||.+++.+|..
T Consensus 78 ~G~~VvapD~~g~~~~~~~----------~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~ 146 (313)
T PLN00021 78 HGFIVVAPQLYTLAGPDGT----------DEIKD-AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALG 146 (313)
T ss_pred CCCEEEEecCCCcCCCCch----------hhHHH-HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhh
Confidence 4699999999997643211 12222 222222222 1 233679999999999999999999
Q ss_pred Ccc-----cccceEEeec
Q 024900 74 EPE-----ICRGMILLNI 86 (261)
Q Consensus 74 ~p~-----~v~~lv~~~~ 86 (261)
+++ +++++|.+++
T Consensus 147 ~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 147 KAAVSLPLKFSALIGLDP 164 (313)
T ss_pred ccccccccceeeEEeecc
Confidence 875 5678887775
No 82
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.08 E-value=1.5e-10 Score=96.46 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=60.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++|+|+++|++|++.+..+. ..+++..+++++..+++.+ ..++++||||||||.||..++..+|++|
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~-------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v 137 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ-------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL 137 (275)
T ss_pred CCCEEEEEECccccccChHH-------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc
Confidence 57999999999985443221 1235566666777766655 3468999999999999999999999999
Q ss_pred cceEEeecchh
Q 024900 79 RGMILLNISLR 89 (261)
Q Consensus 79 ~~lv~~~~~~~ 89 (261)
.++|.++++..
T Consensus 138 ~~iv~LDPa~p 148 (275)
T cd00707 138 GRITGLDPAGP 148 (275)
T ss_pred ceeEEecCCcc
Confidence 99999997643
No 83
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.08 E-value=3.8e-09 Score=85.51 Aligned_cols=77 Identities=22% Similarity=0.287 Sum_probs=62.0
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhC---ccc
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVME---PEI 77 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~---p~~ 77 (261)
|... +.|++++.+|++....+ ..++++++++..+.|.....+ ++.|+|||+||.||+++|.+- -..
T Consensus 23 l~~~~~~v~~i~~~~~~~~~~~---------~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 23 LPDDVIGVYGIEYPGRGDDEPP---------PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HTTTEEEEEEECSTTSCTTSHE---------ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred CCCCeEEEEEEecCCCCCCCCC---------CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 4565 89999999999944432 248999999988888777665 999999999999999999864 345
Q ss_pred ccceEEeecch
Q 024900 78 CRGMILLNISL 88 (261)
Q Consensus 78 v~~lv~~~~~~ 88 (261)
|..|+++|+++
T Consensus 94 v~~l~liD~~~ 104 (229)
T PF00975_consen 94 VSRLILIDSPP 104 (229)
T ss_dssp ESEEEEESCSS
T ss_pred cCceEEecCCC
Confidence 89999999753
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.04 E-value=1.7e-08 Score=86.51 Aligned_cols=219 Identities=17% Similarity=0.206 Sum_probs=113.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhC---c
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVME---P 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~---p 75 (261)
..++|+|+++..||+|.|.-..++ .|+ .-+.+|+.++++.+. ..+...+|.||||.+.+.|-... .
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTpr------~f~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~ 223 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTPR------LFT-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT 223 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCCc------eee-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC
Confidence 457899999999999999765443 344 234667777776664 35799999999999999998853 3
Q ss_pred ccccceEEeecchhh--hhhccCCCCCchhhHHHHHHhhhhhhh-HH-HHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 76 EICRGMILLNISLRM--LHIKKQPWYGRPLIRSFQNLLRNTAAG-KL-FYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
..++++.+.++.-.. ...-..+-..+.+...+...+.+.... +. ++..... ...+.+. .+-..++.
T Consensus 224 ~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd---~d~~~~~-------~SvreFD~ 293 (409)
T KOG1838|consen 224 PLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVD---FDVILKS-------RSVREFDE 293 (409)
T ss_pred CceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccch---hhhhhhc-------CcHHHHHh
Confidence 345666555554321 000000000001111111111100000 00 0000000 0000000 00000111
Q ss_pred H-hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCC
Q 024900 152 I-LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 152 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
. ..+..-....+.|++- ......+.+|.+|+|.|+..+|+++|++.- ....+..|+.-+.+-..+||...+|
T Consensus 294 ~~t~~~~gf~~~deYY~~------aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 294 ALTRPMFGFKSVDEYYKK------ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred hhhhhhcCCCcHHHHHhh------cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 1 1111111122333211 112346889999999999999999998642 2222345666777778999998887
Q ss_pred C----hhh-HHHHHHHHHHh
Q 024900 230 A----PHL-VNPLVESFVTR 244 (261)
Q Consensus 230 ~----p~~-~~~~l~~fl~~ 244 (261)
. +.. +.+.+.+|+.+
T Consensus 368 g~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 368 GLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cCCCccchhHHHHHHHHHHH
Confidence 7 222 33336666654
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.04 E-value=7e-09 Score=89.32 Aligned_cols=189 Identities=15% Similarity=0.169 Sum_probs=97.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
..++.++++|+||-|.|.+-..+ . +.+.+-..+.+.+.... ..++.++|.|+||.+|.++|..+++++++
T Consensus 216 ~rGiA~LtvDmPG~G~s~~~~l~-----~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 216 PRGIAMLTVDMPGQGESPKWPLT-----Q--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp HCT-EEEEE--TTSGGGTTT-S------S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred hCCCEEEEEccCCCcccccCCCC-----c--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 47899999999999999643221 1 22334445555555443 35899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|..+++.-- -+.. .. ...+. |......++.+++.. ..+++.+..-
T Consensus 289 vV~~Ga~vh~-----------~ft~-~~-~~~~~------------P~my~d~LA~rlG~~-~~~~~~l~~e-------- 334 (411)
T PF06500_consen 289 VVALGAPVHH-----------FFTD-PE-WQQRV------------PDMYLDVLASRLGMA-AVSDESLRGE-------- 334 (411)
T ss_dssp EEEES---SC-----------GGH--HH-HHTTS-------------HHHHHHHHHHCT-S-CE-HHHHHHH--------
T ss_pred EeeeCchHhh-----------hhcc-HH-HHhcC------------CHHHHHHHHHHhCCc-cCCHHHHHHH--------
Confidence 9998875210 0100 00 00000 111111122222211 1122222111
Q ss_pred hHHHHHHHHhhcCCCCccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
+..++... .-.| .+..+|+|.|.|++|+++|.+-.+.+.....+.+...|+... +|.--| .-...+
T Consensus 335 -------l~~~SLk~--qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~--~~~gy~-~al~~~ 402 (411)
T PF06500_consen 335 -------LNKFSLKT--QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP--LHMGYP-QALDEI 402 (411)
T ss_dssp -------GGGGSTTT--TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS--HHHHHH-HHHHHH
T ss_pred -------HHhcCcch--hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc--cccchH-HHHHHH
Confidence 11222110 1123 567899999999999999988766666665556777887654 122223 344455
Q ss_pred HHHHHhc
Q 024900 239 ESFVTRH 245 (261)
Q Consensus 239 ~~fl~~~ 245 (261)
.+||++.
T Consensus 403 ~~Wl~~~ 409 (411)
T PF06500_consen 403 YKWLEDK 409 (411)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5677653
No 86
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.04 E-value=2.7e-09 Score=98.67 Aligned_cols=188 Identities=19% Similarity=0.211 Sum_probs=105.3
Q ss_pred cCCCCeEEEecCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCcc
Q 024900 3 LAKSHRVYSIDLIGY---GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~---G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+.+|-|+.++.||- |+.-....+ .+......+++.+.+. ++.+.+. +++.+.|||+||+.++..+...|
T Consensus 420 ~~~G~~V~~~n~RGS~GyG~~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~- 495 (620)
T COG1506 420 ASAGYAVLAPNYRGSTGYGREFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP- 495 (620)
T ss_pred hcCCeEEEEeCCCCCCccHHHHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-
Confidence 457899999999955 433111000 0112235555555544 4444443 47999999999999999999888
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
..++.|...+... +. . ...... .. + ...++ ........ ..+
T Consensus 496 ~f~a~~~~~~~~~--------~~-----~---~~~~~~-~~--~---~~~~~-------~~~~~~~~-~~~--------- 536 (620)
T COG1506 496 RFKAAVAVAGGVD--------WL-----L---YFGEST-EG--L---RFDPE-------ENGGGPPE-DRE--------- 536 (620)
T ss_pred hhheEEeccCcch--------hh-----h---hccccc-hh--h---cCCHH-------HhCCCccc-ChH---------
Confidence 4555544433110 00 0 000000 00 0 00000 00000000 000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCC-CCh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQD-EAP 231 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~-e~p 231 (261)
.+.. . .+-....+|++|+|+|||+.|.-+|.+.+.. +.......+++++|+.||..-- ++-
T Consensus 537 -------~~~~---~----sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~ 602 (620)
T COG1506 537 -------KYED---R----SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENR 602 (620)
T ss_pred -------HHHh---c----ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhH
Confidence 0100 0 0112356799999999999999999886544 3334445789999999999665 555
Q ss_pred hhHHHHHHHHHHhcCC
Q 024900 232 HLVNPLVESFVTRHAT 247 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~~ 247 (261)
..+.+.+.+|++++..
T Consensus 603 ~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 603 VKVLKEILDWFKRHLK 618 (620)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6677777788877654
No 87
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.02 E-value=1.3e-08 Score=84.30 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=67.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCc-
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP- 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p- 75 (261)
|..+|.|++....||-.++...... .....|++++.++--.++++++.. .+++|+|||.|++|++++..+.+
T Consensus 29 l~~~~~i~~ish~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~ 107 (266)
T PF10230_consen 29 LNPQFEILGISHAGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD 107 (266)
T ss_pred CCCCCeeEEecCCCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc
Confidence 4678999999999998886541100 123578999998888888877644 36999999999999999999999
Q ss_pred --ccccceEEeecch
Q 024900 76 --EICRGMILLNISL 88 (261)
Q Consensus 76 --~~v~~lv~~~~~~ 88 (261)
.+|.+++++-+..
T Consensus 108 ~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 108 LKFRVKKVILLFPTI 122 (266)
T ss_pred cCCceeEEEEeCCcc
Confidence 7888888887643
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.01 E-value=3.1e-09 Score=85.25 Aligned_cols=84 Identities=10% Similarity=-0.007 Sum_probs=53.3
Q ss_pred CCCeEEEecCCCCCCCCCCC--CCCCC-CCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPN--PRDFF-DKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~--~~~~~-~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|.|+++|.+|+|.+.... ..... ........++.+-+..+.+..++ ++++|+|||+||.+++.+++.+|+.++
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 121 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFA 121 (212)
T ss_pred CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhhe
Confidence 47999999999998654210 00000 00001112222222222223333 589999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+++.+++.+
T Consensus 122 ~~~~~~g~~ 130 (212)
T TIGR01840 122 GGASNAGLP 130 (212)
T ss_pred EEEeecCCc
Confidence 999888753
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.01 E-value=2.4e-08 Score=93.90 Aligned_cols=77 Identities=14% Similarity=-0.042 Sum_probs=57.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--------------------CCCeEEEEcCh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--------------------KDQAFFICNSI 62 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--------------------~~~~~lvGhS~ 62 (261)
++.+|.|+.+|.||+|.|+.-. ..+. ..-++|..+.|+=+. -+++-++|.||
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~-------~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCP-------TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcC-------ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 4679999999999999997521 1112 223445555554443 35899999999
Q ss_pred hHHHHHHHHhhCcccccceEEeecc
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
||.+++.+|...|+.++++|...+.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999999999999987643
No 90
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.00 E-value=4.5e-09 Score=87.80 Aligned_cols=72 Identities=24% Similarity=0.349 Sum_probs=65.4
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
|.||+|-+||||-|+.+.. ..++....|.-++.+|-.||..++.+=|-+||+.|+..+|..||+.|.|+=+-
T Consensus 189 FEVI~PSlPGygwSd~~sk------~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSK------TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred EEEeccCCCCcccCcCCcc------CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 7899999999999998752 45788888999999999999999999999999999999999999999998654
No 91
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.94 E-value=2.2e-08 Score=100.27 Aligned_cols=77 Identities=13% Similarity=0.027 Sum_probs=65.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|+.+++|+++|++|+|.+.. ..++++++++++.+.+..+.. ++++++||||||.+|+++|.+ .+++
T Consensus 1090 ~l~~~~~v~~~~~~g~~~~~~---------~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~ 1160 (1296)
T PRK10252 1090 YLDPQWSIYGIQSPRPDGPMQ---------TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEE 1160 (1296)
T ss_pred hcCCCCcEEEEECCCCCCCCC---------CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCc
Confidence 467889999999999997642 237999999999999987764 489999999999999999995 5788
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
|..++++++.
T Consensus 1161 v~~l~l~~~~ 1170 (1296)
T PRK10252 1161 VAFLGLLDTW 1170 (1296)
T ss_pred eeEEEEecCC
Confidence 9999999864
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.93 E-value=2e-08 Score=80.75 Aligned_cols=124 Identities=27% Similarity=0.337 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHH
Q 024900 36 FETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (261)
+...++.+.++++.+ ..++++|+|.|.||.+++.+++.+|+.+.++|.+++..... ..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~---------~~-------- 145 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE---------SE-------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG---------CC--------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc---------cc--------
Confidence 334444555555543 23579999999999999999999999999999998642100 00
Q ss_pred hhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEE
Q 024900 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (261)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 190 (261)
. . .. ..... ++|+++
T Consensus 146 ---------------------------------~-~----------------------------~~-~~~~~--~~pi~~ 160 (216)
T PF02230_consen 146 ---------------------------------L-E----------------------------DR-PEALA--KTPILI 160 (216)
T ss_dssp ---------------------------------C-H----------------------------CC-HCCCC--TS-EEE
T ss_pred ---------------------------------c-c----------------------------cc-ccccC--CCcEEE
Confidence 0 0 00 00111 689999
Q ss_pred EecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 191 AWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 191 i~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
++|++|+++|.+.++. +.+...+.+++.++++||-.. ++ ..+.+.+||+++
T Consensus 161 ~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~~l~~~ 215 (216)
T PF02230_consen 161 IHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---PE-ELRDLREFLEKH 215 (216)
T ss_dssp EEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HH-HHHHHHHHHHHH
T ss_pred EecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---HH-HHHHHHHHHhhh
Confidence 9999999999876543 445545678999999999843 44 444677788764
No 93
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.88 E-value=6.8e-08 Score=82.50 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=58.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA-----SQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a-----~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+..+..|+.+|.++=..+... .++++|. +.+..+++..+.+++.++|++.||++...+++.++.+
T Consensus 136 ~~~g~~vfvIsw~nPd~~~~~----------~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 136 LEQGLDVFVISWRNPDASLAA----------KNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHcCCceEEEeccCchHhhhh----------ccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 467889999998887777542 2566665 3444445556678999999999999999999988888
Q ss_pred -ccceEEeecch
Q 024900 78 -CRGMILLNISL 88 (261)
Q Consensus 78 -v~~lv~~~~~~ 88 (261)
|++++++.++.
T Consensus 206 ~I~S~T~lts~~ 217 (445)
T COG3243 206 RIKSLTLLTSPV 217 (445)
T ss_pred ccccceeeecch
Confidence 99999998654
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.83 E-value=1.9e-08 Score=77.70 Aligned_cols=125 Identities=17% Similarity=0.282 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHH-hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAA-VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a-~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (261)
+.++|.+.+.+-+... -++++|||||+|+..++.++ ...+.+|++++++++.... .. ...
T Consensus 38 ~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~----------~~--------~~~ 98 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD----------DP--------EPF 98 (171)
T ss_dssp -HHHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG----------CH--------HCC
T ss_pred CHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc----------cc--------cch
Confidence 5788887777666543 35699999999999999999 7778999999999874110 00 000
Q ss_pred hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEec
Q 024900 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (261)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 193 (261)
. ..+ ..+. .. -...+.+|.++|.+
T Consensus 99 ~-------~~~-----------~~f~-----------------------------------~~---p~~~l~~~~~viaS 122 (171)
T PF06821_consen 99 P-------PEL-----------DGFT-----------------------------------PL---PRDPLPFPSIVIAS 122 (171)
T ss_dssp T-------CGG-----------CCCT-----------------------------------TS---HCCHHHCCEEEEEE
T ss_pred h-------hhc-----------cccc-----------------------------------cC---cccccCCCeEEEEc
Confidence 0 000 0000 00 01223567799999
Q ss_pred CCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 194 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 194 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
++|+++|.+.++.+++... ++++.++++||+...+--..+-
T Consensus 123 ~nDp~vp~~~a~~~A~~l~-a~~~~~~~~GHf~~~~G~~~~p 163 (171)
T PF06821_consen 123 DNDPYVPFERAQRLAQRLG-AELIILGGGGHFNAASGFGPWP 163 (171)
T ss_dssp TTBSSS-HHHHHHHHHHHT--EEEEETS-TTSSGGGTHSS-H
T ss_pred CCCCccCHHHHHHHHHHcC-CCeEECCCCCCcccccCCCchH
Confidence 9999999998888887664 7999999999996654444443
No 95
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.83 E-value=2.6e-07 Score=78.44 Aligned_cols=190 Identities=18% Similarity=0.225 Sum_probs=93.2
Q ss_pred CCCeEEEecCCCCC-CCCCCCCC------C-----CCC-CCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHH
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPR------D-----FFD-KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGL 65 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~------~-----~~~-~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~ 65 (261)
.+|-|+++|.||.| .|...... . ..+ .+.|-+..+..|....++.+. .+++.+.|.|.||.
T Consensus 108 ~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~ 187 (320)
T PF05448_consen 108 AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGG 187 (320)
T ss_dssp TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchH
Confidence 67999999999999 34221100 0 001 222323444455555454442 35799999999999
Q ss_pred HHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhh--hHHHHHhhcChHHHHHHHHhhcCCCCC
Q 024900 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQ 143 (261)
Q Consensus 66 va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (261)
+++.+|+..| +|++++...+.+. .+...+.......+. ...+++.... ...
T Consensus 188 lal~~aaLd~-rv~~~~~~vP~l~------------d~~~~~~~~~~~~~y~~~~~~~~~~d~--------------~~~ 240 (320)
T PF05448_consen 188 LALAAAALDP-RVKAAAADVPFLC------------DFRRALELRADEGPYPEIRRYFRWRDP--------------HHE 240 (320)
T ss_dssp HHHHHHHHSS-T-SEEEEESESSS------------SHHHHHHHT--STTTHHHHHHHHHHSC--------------THC
T ss_pred HHHHHHHhCc-cccEEEecCCCcc------------chhhhhhcCCccccHHHHHHHHhccCC--------------Ccc
Confidence 9999999886 5888887665321 111111100000000 0111110000 000
Q ss_pred CcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCC
Q 024900 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNV 222 (261)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~ 222 (261)
..++.++.+ .|.+. .+..++|+|||++-.|-.|.++|+...-. +.++.-..++.++|..
T Consensus 241 ~~~~v~~~L-----------~Y~D~---------~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~ 300 (320)
T PF05448_consen 241 REPEVFETL-----------SYFDA---------VNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEY 300 (320)
T ss_dssp HHHHHHHHH-----------HTT-H---------HHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT-
T ss_pred cHHHHHHHH-----------hhhhH---------HHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCc
Confidence 001111110 11111 12346789999999999999999987543 4444434689999999
Q ss_pred CCCCCCCChhhH-HHHHHHHHHhc
Q 024900 223 GHCPQDEAPHLV-NPLVESFVTRH 245 (261)
Q Consensus 223 gH~~~~e~p~~~-~~~l~~fl~~~ 245 (261)
||. .+.++ .+....||.++
T Consensus 301 ~He----~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 301 GHE----YGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp -SS----TTHHHHHHHHHHHHHH-
T ss_pred CCC----chhhHHHHHHHHHHhcC
Confidence 996 44444 66666687654
No 96
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.82 E-value=1.2e-08 Score=80.23 Aligned_cols=206 Identities=17% Similarity=0.272 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHH----HHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS-QLNDFC----KDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~-dl~~~~----~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|.|.++|+||-|.|+.+..+ ...+.+.+|+. |+...+ +.+...+..+||||+||.+.-.+. ++| ++.
T Consensus 56 ~Gf~Vlt~dyRG~g~S~p~~~~----~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~ 129 (281)
T COG4757 56 AGFEVLTFDYRGIGQSRPASLS----GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYA 129 (281)
T ss_pred cCceEEEEecccccCCCccccc----cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccc
Confidence 6799999999999999865322 13455566542 333333 334456899999999998654444 466 566
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHH----hhhhhhhHHHHHhhcChHHHHHHHHhhcCC--CCCCcHHHHHHHh
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNL----LRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKIL 153 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 153 (261)
+..+.++.... ..+.++ .+.+.-. +...++. +++....+ .++ .+++ ...+-.+|.+.+.
T Consensus 130 a~~vfG~gagw-----sg~m~~--~~~l~~~~l~~lv~p~lt--~w~g~~p~----~l~--G~G~d~p~~v~RdW~RwcR 194 (281)
T COG4757 130 AFAVFGSGAGW-----SGWMGL--RERLGAVLLWNLVGPPLT--FWKGYMPK----DLL--GLGSDLPGTVMRDWARWCR 194 (281)
T ss_pred eeeEecccccc-----ccchhh--hhcccceeeccccccchh--hccccCcH----hhc--CCCccCcchHHHHHHHHhc
Confidence 66555543221 011110 0000000 0000100 11111000 000 0110 0111122222221
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc--EEEcCC----CCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPN----VGHCPQ 227 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~i~~----~gH~~~ 227 (261)
.+..... +. .+. ..++..+++++|++.+...+|+++|+.+.+.+....+|+. ...++. -||+--
T Consensus 195 ~p~y~fd--dp--~~~------~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gy 264 (281)
T COG4757 195 HPRYYFD--DP--AMR------NYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGY 264 (281)
T ss_pred Ccccccc--Ch--hHh------HHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhh
Confidence 1110000 00 000 0123456789999999999999999988776665555543 344444 499988
Q ss_pred CCCh-hhHHHHHHHH
Q 024900 228 DEAP-HLVNPLVESF 241 (261)
Q Consensus 228 ~e~p-~~~~~~l~~f 241 (261)
+-+| |.+.+.+.+|
T Consensus 265 fR~~~Ealwk~~L~w 279 (281)
T COG4757 265 FREPFEALWKEMLGW 279 (281)
T ss_pred hccchHHHHHHHHHh
Confidence 8777 6555555444
No 97
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.81 E-value=2.1e-08 Score=80.78 Aligned_cols=155 Identities=21% Similarity=0.208 Sum_probs=86.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFY------TFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~------~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a 71 (261)
+.+|.|+++|+-+-.......... . ...+ ..+...+++...++.|. .+++.++|.||||.+++.+|
T Consensus 39 ~~Gy~v~~pD~f~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 39 EEGYVVLAPDLFGGRGAPPSDPEE-A-FAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HTT-EEEEE-CCCCTS--CCCHHC-H-HHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred hcCCCEEecccccCCCCCccchhh-H-HHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 368999999986655411111000 0 0000 02345566655565553 24799999999999999999
Q ss_pred hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 72 ~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
... +.+++.|..-+... . . . .
T Consensus 117 ~~~-~~~~a~v~~yg~~~------------~--------------~--------~-------------------~----- 137 (218)
T PF01738_consen 117 ARD-PRVDAAVSFYGGSP------------P--------------P--------P-------------------P----- 137 (218)
T ss_dssp CCT-TTSSEEEEES-SSS------------G--------------G--------G-------------------H-----
T ss_pred hhc-cccceEEEEcCCCC------------C--------------C--------c-------------------c-----
Confidence 877 67888876543000 0 0 0 0
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhh----hhccCCCCccEEEcCCCCCCCC
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGR----AYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~----~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
.+....+++|+++++|++|++++.+..+ .+.+.....++++++|++|.-.
T Consensus 138 --------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 138 --------------------------LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp --------------------------HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTT
T ss_pred --------------------------hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccccc
Confidence 0012346789999999999999987532 3434455679999999999966
Q ss_pred CCChh--------hHHHHHHHHHHhc
Q 024900 228 DEAPH--------LVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~--------~~~~~l~~fl~~~ 245 (261)
..... +-.+.+.+|++++
T Consensus 192 ~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 192 NPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp STTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 43332 2234555677654
No 98
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.79 E-value=6.4e-09 Score=91.49 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=57.1
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc----cc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----CR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~ 79 (261)
.+...+...|++|+|.+.+...+ ....++++.+.|.++.+..+.++++||||||||.++..++..+|+. |+
T Consensus 118 ~~~GY~~~~dL~g~gYDwR~~~~-----~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~ 192 (440)
T PLN02733 118 IKWGYKEGKTLFGFGYDFRQSNR-----LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVN 192 (440)
T ss_pred HHcCCccCCCcccCCCCcccccc-----HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhc
Confidence 33334558999999999764210 0112344454555555556678999999999999999999988874 78
Q ss_pred ceEEeecchh
Q 024900 80 GMILLNISLR 89 (261)
Q Consensus 80 ~lv~~~~~~~ 89 (261)
++|.++++..
T Consensus 193 ~~I~la~P~~ 202 (440)
T PLN02733 193 SWIAIAAPFQ 202 (440)
T ss_pred cEEEECCCCC
Confidence 8889987643
No 99
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.79 E-value=6.8e-07 Score=79.75 Aligned_cols=79 Identities=16% Similarity=0.103 Sum_probs=57.3
Q ss_pred CCCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhhC-
Q 024900 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 4 ~~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.+...|+.+|+| |+|.|...... ...+..+.++|+.++++.+ ...+++|+||||||..+..+|..-
T Consensus 119 ~~~~~~l~iDqP~G~G~S~~~~~~-----~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 119 NNEAYVIYVDQPAGVGFSYADKAD-----YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred ccccCeEEEeCCCCcCcccCCCCC-----CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 356889999986 88888642211 1245678899998888743 347899999999999998887742
Q ss_pred ---------cccccceEEeecc
Q 024900 75 ---------PEICRGMILLNIS 87 (261)
Q Consensus 75 ---------p~~v~~lv~~~~~ 87 (261)
+-.++|+++-++.
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred hhccccCCceeeeEEEEEeccc
Confidence 1247888888764
No 100
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.77 E-value=2.6e-07 Score=70.79 Aligned_cols=145 Identities=18% Similarity=0.248 Sum_probs=93.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|.|+-||+||-|+|...-.. ..=-.++.. -+.++++...-. .+.|.|.|.|+.|++.+|.+.|+. .+
T Consensus 59 ~G~atlRfNfRgVG~S~G~fD~-----GiGE~~Da~-aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~---~~ 129 (210)
T COG2945 59 RGFATLRFNFRGVGRSQGEFDN-----GIGELEDAA-AALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI---LV 129 (210)
T ss_pred CCceEEeecccccccccCcccC-----CcchHHHHH-HHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc---cc
Confidence 5799999999999999854210 111123322 233455555433 357999999999999999988764 23
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++..+. . ..
T Consensus 130 ~is~~p~---------~-----------------~~-------------------------------------------- 139 (210)
T COG2945 130 FISILPP---------I-----------------NA-------------------------------------------- 139 (210)
T ss_pred eeeccCC---------C-----------------Cc--------------------------------------------
Confidence 3332100 0 00
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
+++ ..+.-..+|+++|+|+.|.++.++..-...+-.+ .+++.++++.|+.+- +-+.+.+.+.+||
T Consensus 140 ---~df----------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~-~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l 204 (210)
T COG2945 140 ---YDF----------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK-ITVITIPGADHFFHG-KLIELRDTIADFL 204 (210)
T ss_pred ---hhh----------hhccCCCCCceeEecChhhhhcHHHHHHhhcCCC-CceEEecCCCceecc-cHHHHHHHHHHHh
Confidence 000 0123356899999999999888775433333233 578899999999775 5566888888898
Q ss_pred H
Q 024900 243 T 243 (261)
Q Consensus 243 ~ 243 (261)
.
T Consensus 205 ~ 205 (210)
T COG2945 205 E 205 (210)
T ss_pred h
Confidence 5
No 101
>PRK10162 acetyl esterase; Provisional
Probab=98.69 E-value=3.6e-07 Score=77.91 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhC------cc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME------PE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~------p~ 76 (261)
.++.|+++|+|.......|. ...+..+..+.+.+..+.+++ +++.|+|+|+||.+++.++... +.
T Consensus 111 ~g~~Vv~vdYrlape~~~p~-------~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~ 183 (318)
T PRK10162 111 SGCTVIGIDYTLSPEARFPQ-------AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCG 183 (318)
T ss_pred cCCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCcc
Confidence 37999999999755432221 111222222333333445554 5899999999999999999753 35
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
+++++|++.+.
T Consensus 184 ~~~~~vl~~p~ 194 (318)
T PRK10162 184 KVAGVLLWYGL 194 (318)
T ss_pred ChhheEEECCc
Confidence 78888888764
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.68 E-value=7.7e-08 Score=89.54 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=52.8
Q ss_pred CCCeEEEecCCCCCCCCCC-CCCC----CCCCCCC-----------CHHHHHHHHHHHHHHhc----------------C
Q 024900 5 KSHRVYSIDLIGYGYSDKP-NPRD----FFDKPFY-----------TFETWASQLNDFCKDVV----------------K 52 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~-~~~~----~~~~~~~-----------~~~~~a~dl~~~~~~l~----------------~ 52 (261)
.+|+|+++|+||||+|... ..+. ......| +++.++.|+..+...++ .
T Consensus 475 ~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~ 554 (792)
T TIGR03502 475 AGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDG 554 (792)
T ss_pred CCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 6899999999999999542 1000 0001112 78999999999888776 2
Q ss_pred CCeEEEEcChhHHHHHHHHhhC
Q 024900 53 DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.+++++||||||.++..++...
T Consensus 555 ~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 555 SKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CcEEEEecCHHHHHHHHHHHhc
Confidence 4899999999999999999853
No 103
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.59 E-value=4.9e-08 Score=78.28 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 39 WASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 39 ~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
|.++..+++.... .+++.|+|.|.||.+|+.+|..+| .|+.+|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 4455556666552 258999999999999999999998 8999999987644
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.54 E-value=5.7e-07 Score=74.63 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHHh--------cCCCeEEEEcChhHHHHHHHHhhC-c----ccccceEEeecc
Q 024900 35 TFETWASQLNDFCKDV--------VKDQAFFICNSIGGLVGLQAAVME-P----EICRGMILLNIS 87 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l--------~~~~~~lvGhS~Gg~va~~~a~~~-p----~~v~~lv~~~~~ 87 (261)
++++=++||.++++.+ +.++++|+|||-|+--+++|.... + ..|++.|+-.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 4556677777666544 245899999999999999998864 2 679999888763
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.51 E-value=5.5e-06 Score=64.80 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
.......+.+.++++....+.+.|||.||||+.|..+|.+++ +.+ |++|+...
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 345666777888888887778999999999999999999885 444 78897643
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.49 E-value=2.9e-06 Score=63.19 Aligned_cols=136 Identities=19% Similarity=0.238 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCC-----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGY-----GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~-----G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.++.|.-|+++=+ |+- +|++. ...-...|...+.++...+...+.++-||||||.++-..|..-...|+
T Consensus 42 ~G~~vaRfefpYma~Rrtg~r-kPp~~-----~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~ 115 (213)
T COG3571 42 RGWLVARFEFPYMAARRTGRR-KPPPG-----SGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPID 115 (213)
T ss_pred CceeEEEeecchhhhccccCC-CCcCc-----cccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcc
Confidence 4577777776543 322 22211 223356777778888887777899999999999999999887656699
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
+|++++=++-. .++ + +.
T Consensus 116 ~L~clgYPfhp--------pGK-------------------------P-------------------e~----------- 132 (213)
T COG3571 116 GLVCLGYPFHP--------PGK-------------------------P-------------------EQ----------- 132 (213)
T ss_pred eEEEecCccCC--------CCC-------------------------c-------------------cc-----------
Confidence 99988743110 000 0 00
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
...+.|..++.|++|.+|+.|.+-..+....|. ..+..++++++++.|-+
T Consensus 133 ----------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDL 182 (213)
T COG3571 133 ----------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDL 182 (213)
T ss_pred ----------------chhhhccCCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCcccc
Confidence 001336778999999999999998776543333 23347999999999973
No 107
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.45 E-value=4.7e-07 Score=75.44 Aligned_cols=77 Identities=17% Similarity=0.019 Sum_probs=52.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
...+|-|++.|.||+|.|+-.. . .....-++|..+.|+=+ .. .+|-++|.|++|..++.+|+..|..
T Consensus 54 ~~~GY~vV~~D~RG~g~S~G~~-------~-~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~ 125 (272)
T PF02129_consen 54 AERGYAVVVQDVRGTGGSEGEF-------D-PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH 125 (272)
T ss_dssp HHTT-EEEEEE-TTSTTS-S-B---------TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT
T ss_pred HhCCCEEEEECCcccccCCCcc-------c-cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC
Confidence 3578999999999999997431 1 11233345555544433 32 3799999999999999999988889
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
+++++...+.
T Consensus 126 LkAi~p~~~~ 135 (272)
T PF02129_consen 126 LKAIVPQSGW 135 (272)
T ss_dssp EEEEEEESE-
T ss_pred ceEEEecccC
Confidence 9999887654
No 108
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.45 E-value=1.7e-06 Score=68.48 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=58.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|+..++|+++|++|+|.+.... .+++.+++++.+.+... ...+++++|||+||.++..++.. .++.
T Consensus 21 ~l~~~~~v~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 21 ALRGRRDVSALPLPGFGPGEPLP---------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred hcCCCccEEEecCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35677899999999999776432 35677776665555443 35689999999999999999986 4567
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
+.+++++++.
T Consensus 92 ~~~l~~~~~~ 101 (212)
T smart00824 92 PAAVVLLDTY 101 (212)
T ss_pred CcEEEEEccC
Confidence 9999888764
No 109
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.43 E-value=1e-05 Score=65.87 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=91.6
Q ss_pred CCCCeEEEecCCCC-CCCCCCC--CCCCCC--CCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHh
Q 024900 4 AKSHRVYSIDLIGY-GYSDKPN--PRDFFD--KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~-G~S~~~~--~~~~~~--~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~ 72 (261)
..+|-|+++|+-+. |.+..-. +..... ....+......|+...++.|. .+++.++|.||||.+++.++.
T Consensus 52 ~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 52 KAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred hCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 36899999999985 4442211 000000 001234677778877777764 356999999999999999999
Q ss_pred hCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 73 ~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
..| .|++.|..-+.... .
T Consensus 132 ~~~-~v~a~v~fyg~~~~-------------------------------------------------~------------ 149 (236)
T COG0412 132 RAP-EVKAAVAFYGGLIA-------------------------------------------------D------------ 149 (236)
T ss_pred ccC-CccEEEEecCCCCC-------------------------------------------------C------------
Confidence 887 67777654321000 0
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~~ 228 (261)
......++++|+|++.|+.|..+|......+. ......++.+++++.|..+-
T Consensus 150 ------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~ 205 (236)
T COG0412 150 ------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAN 205 (236)
T ss_pred ------------------------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccccc
Confidence 00113468899999999999999987543332 22224688999999898764
Q ss_pred C
Q 024900 229 E 229 (261)
Q Consensus 229 e 229 (261)
+
T Consensus 206 ~ 206 (236)
T COG0412 206 D 206 (236)
T ss_pred C
Confidence 4
No 110
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.43 E-value=4.9e-06 Score=70.21 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC-CCCCChhhHHHHHHHHHH
Q 024900 186 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~l~~fl~ 243 (261)
-.+.+|.+++|.++|......+.++.|++++.++++ ||. ..+-+.+.|.+.|.+-++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 458999999999999887778999999999999977 999 557788889888886553
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.36 E-value=1.3e-05 Score=60.79 Aligned_cols=135 Identities=16% Similarity=0.235 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (261)
-..++|++.+.+-+... .++++||+||+|+..+..++.....+|+|..++.++... ++.. .
T Consensus 41 P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~----------~~~~-------~- 101 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS----------RPEI-------R- 101 (181)
T ss_pred CCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc----------cccc-------c-
Confidence 46788887777666555 456999999999999999999877799999998864210 0000 0
Q ss_pred hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEec
Q 024900 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (261)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 193 (261)
. . ...+| ... . .....-|.++|..
T Consensus 102 ---~----~-----------~~~tf-----------------------------------~~~--p-~~~lpfps~vvaS 125 (181)
T COG3545 102 ---P----K-----------HLMTF-----------------------------------DPI--P-REPLPFPSVVVAS 125 (181)
T ss_pred ---h----h-----------hcccc-----------------------------------CCC--c-cccCCCceeEEEe
Confidence 0 0 00000 001 1 2334569999999
Q ss_pred CCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC---ChhhHHHHHHHHHHh
Q 024900 194 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE---APHLVNPLVESFVTR 244 (261)
Q Consensus 194 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e---~p~~~~~~l~~fl~~ 244 (261)
++|++++.+.++.+++... +.++...++||+--.. .=.+....+.+|+.+
T Consensus 126 rnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 126 RNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 9999999999888887765 6888999999984422 112345566666654
No 112
>COG0400 Predicted esterase [General function prediction only]
Probab=98.33 E-value=4.7e-06 Score=66.10 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 38 TWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
.+++-+.+..++.++ ++++++|.|=||.|++.+.+.+|+.++++|++++.
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~ 133 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGM 133 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCc
Confidence 334444455556666 78999999999999999999999999999988763
No 113
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.27 E-value=4.3e-06 Score=67.55 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhC-
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL----NDFCKDV-----VKDQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl----~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.+++++++|+......-.. .++.+.++.+ ..+++.+ ..++++||||||||.|+..+....
T Consensus 38 ~~~d~ft~df~~~~s~~~g----------~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~ 107 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFHG----------RTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN 107 (225)
T ss_pred cceeEEEeccCcccccccc----------ccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc
Confidence 3578899998776433211 1333333333 3333333 356899999999999999888754
Q ss_pred --cccccceEEeecchh
Q 024900 75 --PEICRGMILLNISLR 89 (261)
Q Consensus 75 --p~~v~~lv~~~~~~~ 89 (261)
++.|+.+|.+++|..
T Consensus 108 ~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 108 YDPDSVKTIITLGTPHR 124 (225)
T ss_pred cccccEEEEEEEcCCCC
Confidence 357999999998643
No 114
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.27 E-value=2.9e-05 Score=62.05 Aligned_cols=190 Identities=13% Similarity=0.116 Sum_probs=84.2
Q ss_pred cCCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~---~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+.+|+|+-||-.-| |.|+.. ...|++....+++...++ ..|..++-||..|+.|.||++.|+.- .+
T Consensus 54 ~~NGFhViRyDsl~HvGlSsG~-------I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~l 124 (294)
T PF02273_consen 54 SANGFHVIRYDSLNHVGLSSGD-------INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NL 124 (294)
T ss_dssp HTTT--EEEE---B--------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----
T ss_pred hhCCeEEEeccccccccCCCCC-------hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--Cc
Confidence 357899999999988 999753 145889888888876654 44677899999999999999999843 36
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC-cHHHHHHHhccCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPGL 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 157 (261)
.-||...+..-+ -..+...+.....+... ..+... .-+ ..-.+ .+.++..++..++
T Consensus 125 sfLitaVGVVnl-------------r~TLe~al~~Dyl~~~i-~~lp~d--------ldf-eGh~l~~~vFv~dc~e~~w 181 (294)
T PF02273_consen 125 SFLITAVGVVNL-------------RDTLEKALGYDYLQLPI-EQLPED--------LDF-EGHNLGAEVFVTDCFEHGW 181 (294)
T ss_dssp SEEEEES--S-H-------------HHHHHHHHSS-GGGS-G-GG--SE--------EEE-TTEEEEHHHHHHHHHHTT-
T ss_pred ceEEEEeeeeeH-------------HHHHHHHhccchhhcch-hhCCCc--------ccc-cccccchHHHHHHHHHcCC
Confidence 666655543211 11111111111100000 000000 000 00001 1223333332221
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccC-CCCccEEEcCCCCCCCCCCChhhHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNF-DSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.. .+ .+....+.++||++..++++|.|+....... +..+ .+.++++.++|++|-+.+ +|-
T Consensus 182 ~~--l~------------ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e-nl~--- 243 (294)
T PF02273_consen 182 DD--LD------------STINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGE-NLV--- 243 (294)
T ss_dssp SS--HH------------HHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTS-SHH---
T ss_pred cc--ch------------hHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhh-ChH---
Confidence 11 00 0123457789999999999999987765444 4444 345789999999999764 554
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
.+++|.+
T Consensus 244 -vlrnfy~ 250 (294)
T PF02273_consen 244 -VLRNFYQ 250 (294)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 3444544
No 115
>PRK10115 protease 2; Provisional
Probab=98.25 E-value=5.3e-05 Score=71.06 Aligned_cols=85 Identities=20% Similarity=0.160 Sum_probs=57.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.++++|-|+.+..||-|.=.+...+. .......+++++++-+..++++ + .+++.+.|.|.||+++..++.++|++
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl 548 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPEL 548 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhh
Confidence 36789999999999965443211000 0001123566666555444433 4 25799999999999999999999999
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
.+++|...+.
T Consensus 549 f~A~v~~vp~ 558 (686)
T PRK10115 549 FHGVIAQVPF 558 (686)
T ss_pred eeEEEecCCc
Confidence 9999876653
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.23 E-value=1.4e-05 Score=65.63 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc-----cccceEEeecchh
Q 024900 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLR 89 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~~ 89 (261)
+....+.-+..++..| +++++.+|||||||..++.+...+-. .|..+|.|++++-
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 4556666666666555 57899999999999999999887422 5899999998653
No 117
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.23 E-value=1.9e-05 Score=63.98 Aligned_cols=188 Identities=20% Similarity=0.240 Sum_probs=100.8
Q ss_pred CCCCeEEEecCCCCCCCCC----CCCC--CCC-------C-CCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChh
Q 024900 4 AKSHRVYSIDLIGYGYSDK----PNPR--DFF-------D-KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIG 63 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~----~~~~--~~~-------~-~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~G 63 (261)
+.+|.|++.|-||-|.|.. ++.. ..+ + ...|-+.....|+...++.+ ..+++.+.|.|-|
T Consensus 107 ~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqG 186 (321)
T COG3458 107 VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQG 186 (321)
T ss_pred ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccC
Confidence 3689999999999998832 2111 000 1 22333334444444444433 3468999999999
Q ss_pred HHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhh-HHHHHhhcChHHHHHHHHhhcCCCC
Q 024900 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG-KLFYKMVATSESVRNILCQCYNDTS 142 (261)
Q Consensus 64 g~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (261)
|.|++..|+..| ++++++..=+.+. + +...++......... ..||+. +.+
T Consensus 187 Gglalaaaal~~-rik~~~~~~Pfl~--d----------f~r~i~~~~~~~ydei~~y~k~--------------h~~-- 237 (321)
T COG3458 187 GGLALAAAALDP-RIKAVVADYPFLS--D----------FPRAIELATEGPYDEIQTYFKR--------------HDP-- 237 (321)
T ss_pred chhhhhhhhcCh-hhhcccccccccc--c----------chhheeecccCcHHHHHHHHHh--------------cCc--
Confidence 999999999776 6888875443221 1 001111000000000 001110 000
Q ss_pred CCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCC
Q 024900 143 QVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPN 221 (261)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~ 221 (261)
..++.++.+ .|.+. .+...+|++|+|+..|--|.++|+...-...+. ....++.+++.
T Consensus 238 -~e~~v~~TL-----------~yfD~---------~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~ 296 (321)
T COG3458 238 -KEAEVFETL-----------SYFDI---------VNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPY 296 (321)
T ss_pred -hHHHHHHHH-----------hhhhh---------hhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeec
Confidence 001111111 11111 233567999999999999999999865333333 33346667776
Q ss_pred CCCCCCCCChhhHHHHHHHHHHh
Q 024900 222 VGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 222 ~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
=+|. +-|.-.++.+-.|++.
T Consensus 297 ~aHe---~~p~~~~~~~~~~l~~ 316 (321)
T COG3458 297 FAHE---GGPGFQSRQQVHFLKI 316 (321)
T ss_pred cccc---cCcchhHHHHHHHHHh
Confidence 6666 5565555555566654
No 118
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.21 E-value=5.3e-06 Score=67.90 Aligned_cols=79 Identities=23% Similarity=0.324 Sum_probs=63.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|.+...|+..+-||+|.-..+ .-+++++++.-.+.|.+.. ..+++|+|||+||.||+++|.+ .-+.
T Consensus 22 ~l~~~~~v~~l~a~g~~~~~~~---------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~ 92 (257)
T COG3319 22 ALGPLLPVYGLQAPGYGAGEQP---------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEE 92 (257)
T ss_pred HhccCceeeccccCcccccccc---------cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCe
Confidence 3566788999999999864432 2378888888877777765 4689999999999999999986 2457
Q ss_pred ccceEEeecchh
Q 024900 78 CRGMILLNISLR 89 (261)
Q Consensus 78 v~~lv~~~~~~~ 89 (261)
|..|+++|+.+.
T Consensus 93 Va~L~llD~~~~ 104 (257)
T COG3319 93 VAFLGLLDAVPP 104 (257)
T ss_pred EEEEEEeccCCC
Confidence 999999998754
No 119
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.21 E-value=0.00011 Score=64.90 Aligned_cols=57 Identities=21% Similarity=0.320 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 33 FYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
..|+++...-...|++... ..++.|||+-=||.-++.+|+.+|+.+.-+|+-+++..
T Consensus 115 gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 115 GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 4688888777777776653 24899999999999999999999999999988776543
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.12 E-value=9.3e-06 Score=63.05 Aligned_cols=153 Identities=22% Similarity=0.201 Sum_probs=88.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHh-cCCCeEEEEcChhHHHHHHHHhh-Ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC----KDV-VKDQAFFICNSIGGLVGLQAAVM-EPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~----~~l-~~~~~~lvGhS~Gg~va~~~a~~-~p~ 76 (261)
+-.+|+|.+. |||.+..- -++.....|....+ +.. +.+.+.+-|||-|+++++.+..+ +..
T Consensus 94 ~~~gY~vasv---gY~l~~q~----------htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~p 160 (270)
T KOG4627|consen 94 VRRGYRVASV---GYNLCPQV----------HTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSP 160 (270)
T ss_pred hhcCeEEEEe---ccCcCccc----------ccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCc
Confidence 4467888876 67888532 24555444443322 222 23457778899999999998876 455
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+|.+++++++.+...+ +.... +++.-.++++..+..
T Consensus 161 rI~gl~l~~GvY~l~E------------------L~~te----------------------~g~dlgLt~~~ae~~---- 196 (270)
T KOG4627|consen 161 RIWGLILLCGVYDLRE------------------LSNTE----------------------SGNDLGLTERNAESV---- 196 (270)
T ss_pred hHHHHHHHhhHhhHHH------------------HhCCc----------------------cccccCcccchhhhc----
Confidence 7888887775422110 00000 000000111111000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
+ + ..+.+..++.|+|++.|+++...-.+..+.+......+++..+++.+|+-.+|+
T Consensus 197 ---------------S-c--dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 197 ---------------S-C--DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---------------C-c--cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 0 0 013356788999999999997655555566665545589999999999955443
No 121
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.07 E-value=6.9e-06 Score=54.86 Aligned_cols=39 Identities=21% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~ 48 (261)
..+|.|+++|+||||+|+.... ..-+++++++|+..+++
T Consensus 41 ~~G~~V~~~D~rGhG~S~g~rg------~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 41 EQGYAVFAYDHRGHGRSEGKRG------HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred hCCCEEEEECCCcCCCCCCccc------ccCCHHHHHHHHHHHhC
Confidence 4689999999999999985321 22378999999988763
No 122
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.03 E-value=1.2e-05 Score=56.68 Aligned_cols=61 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred CCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 184 VKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
-..|+|+|.++.|+.+|.+.++.+++..++++++.+++.||......-..+.+++.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 3589999999999999999988888777779999999999998875567789999999964
No 123
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.98 E-value=1.8e-05 Score=66.09 Aligned_cols=74 Identities=20% Similarity=0.188 Sum_probs=53.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-CKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++-+|+|..+..|||+.|...+. ...+.+. +|.+.++ |..|+. +.++|.|||.||+-+.-+|..||+ |+
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~------p~n~~nA-~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vk 336 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPY------PVNTLNA-ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VK 336 (517)
T ss_pred HHhCceeeccCCCCccccCCCCC------cccchHH-HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ce
Confidence 35689999999999998864321 1223333 3334444 666664 679999999999999999999996 88
Q ss_pred ceEEe
Q 024900 80 GMILL 84 (261)
Q Consensus 80 ~lv~~ 84 (261)
++|+=
T Consensus 337 avvLD 341 (517)
T KOG1553|consen 337 AVVLD 341 (517)
T ss_pred EEEee
Confidence 88753
No 124
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.92 E-value=0.00053 Score=57.68 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=41.1
Q ss_pred CCCCCEEEEecCCCCCCCchhhhh----hccCC-CCccEEEcCCCCCCCCC--CChhhHHHHHHHHHHhcCCC
Q 024900 183 QVKCPVLIAWGDKDPWEPIELGRA----YGNFD-SVEDFIVLPNVGHCPQD--EAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 183 ~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~-~~~~~~~i~~~gH~~~~--e~p~~~~~~l~~fl~~~~~~ 248 (261)
.-+.|++|.+|..|.++|....+. +.+.. .+.++..+++.+|.... ..|+.+ .|+...-..
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~-----~Wl~~rf~G 284 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDAL-----AWLDDRFAG 284 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHH-----HHHHHHHCC
Confidence 347899999999999999876543 33444 45677888999998542 333333 466654443
No 125
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.65 E-value=0.00026 Score=59.56 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=45.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-------CCCeEEEEcChhHHHHHHHHhhC
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.+-+|+++.+||.|.|..+. +.++++.|-.+.++.|. .+++.+-|||+||.|+.++...+
T Consensus 170 ~~aNvl~fNYpGVg~S~G~~----------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTGPP----------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCcEEEECCCccccCCCCC----------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 45789999999999997542 45677766666666553 25799999999999998855544
No 126
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.59 E-value=0.0011 Score=53.77 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC-CCCCChhhHHHHHHHHHHhc
Q 024900 188 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 188 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.++.+++|.++|......+.++.|++++..++ .||. ..+-+-++|.+.|.+-|.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 678899999999998778899999999999998 6999 44778899999999888653
No 127
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.57 E-value=0.00011 Score=57.94 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=42.9
Q ss_pred CCCCCCCEEEEecCCCCCCCchhhhh----hccCCC-CccEEEcCCCCCCCC-----CCChhh------HHHHHHHHHHh
Q 024900 181 LPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDS-VEDFIVLPNVGHCPQ-----DEAPHL------VNPLVESFVTR 244 (261)
Q Consensus 181 l~~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~-~~~~~~i~~~gH~~~-----~e~p~~------~~~~l~~fl~~ 244 (261)
++.+++|||++.|+.|..+|+..... +.+... ..++.++++.||.-+ .+.||. -.+.+..|+++
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 34577999999999999999875433 332221 247999999999854 455543 33445556654
No 128
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.55 E-value=0.003 Score=54.48 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=47.2
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++++|.++|.|..|.+..+..... +.++.....+..+||++|..-. ..+...+..|+...
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 5669999999999999888877655 4555545678999999999666 55666677787653
No 129
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.0019 Score=51.98 Aligned_cols=227 Identities=16% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCeEEEecCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhC-c-cc
Q 024900 5 KSHRVYSIDLIGYGYSD---KPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME-P-EI 77 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~---~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~-p-~~ 77 (261)
+.+.|+++--.||-.-. +-+++ -...+.|++++.++-=.+|++..-- .+++++|||-|+++.+++.... + -.
T Consensus 58 ~r~~~wtIsh~~H~~~P~sl~~~~s-~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~ 136 (301)
T KOG3975|consen 58 DRLPVWTISHAGHALMPASLREDHS-HTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFS 136 (301)
T ss_pred cccceeEEeccccccCCcccccccc-cccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccc
Confidence 44567777777775432 11111 0123568899988887888887753 5799999999999999998732 2 24
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh-hcChHHHHHHHHhhcCCCCCCcHHHHHHHh---
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEKIL--- 153 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (261)
|.+.+++=+..-....+...+...+....+... ..-..+.. ...+.+.+.++.+...-......+.+.+.+
T Consensus 137 vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv-----~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~ 211 (301)
T KOG3975|consen 137 VQKAVLLFPTIERMHESPNGIRLTKVLRYLPHV-----VSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLT 211 (301)
T ss_pred eEEEEEecchHHHHhcCCCceEeeeeeeeehhh-----hheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhh
Confidence 666666644321111111111111100000000 00000001 123444444443322222223334332211
Q ss_pred ccCCCCchHHHHH---HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCc--cEEEcCCCCCCCCC
Q 024900 154 QPGLETGAADVFL---EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE--DFIVLPNVGHCPQD 228 (261)
Q Consensus 154 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~ 228 (261)
.+..-. ..+++ ++....+ ...+.+.+--+-+.+..|..|.|+|.+....++...|.. ++.+ +++-|..-.
T Consensus 212 h~~v~r--n~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~ 286 (301)
T KOG3975|consen 212 HPQVVR--NSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVV 286 (301)
T ss_pred cHHHHH--HHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceee
Confidence 110000 00000 0000000 012233444578999999999999998887787665543 4444 788888777
Q ss_pred CChhhHHHHHHHHH
Q 024900 229 EAPHLVNPLVESFV 242 (261)
Q Consensus 229 e~p~~~~~~l~~fl 242 (261)
.+.+..+.++.+.+
T Consensus 287 ~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 287 KHAQYMANAVFDMI 300 (301)
T ss_pred cccHHHHHHHHHhh
Confidence 78888777777654
No 130
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.52 E-value=0.00027 Score=56.60 Aligned_cols=49 Identities=24% Similarity=0.334 Sum_probs=29.3
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCCh
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p 231 (261)
..|++|+|-|+|++|.+++++.++.+.+...+ .+++..+ +||..+...+
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 45799999999999999998777766655333 5666664 5899776443
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.48 E-value=0.0047 Score=52.43 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=49.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhc--CCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVV--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~---~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
..++.|+++|+|---+-..| ..+++..+-+.-+. .+++ .+++.+.|+|-||.+++.++..-.+
T Consensus 108 ~~g~~vv~vdYrlaPe~~~p----------~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~ 177 (312)
T COG0657 108 AAGAVVVSVDYRLAPEHPFP----------AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG 177 (312)
T ss_pred HcCCEEEecCCCCCCCCCCC----------chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC
Confidence 46899999999876555332 13344322222222 2234 4679999999999999999986543
Q ss_pred --cccceEEeecch
Q 024900 77 --ICRGMILLNISL 88 (261)
Q Consensus 77 --~v~~lv~~~~~~ 88 (261)
...+.+++.+..
T Consensus 178 ~~~p~~~~li~P~~ 191 (312)
T COG0657 178 LPLPAAQVLISPLL 191 (312)
T ss_pred CCCceEEEEEeccc
Confidence 466777777653
No 132
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.46 E-value=0.00034 Score=52.95 Aligned_cols=51 Identities=12% Similarity=0.028 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc----cccceEEeecc
Q 024900 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE----ICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lv~~~~~ 87 (261)
....+++...++.. ...+++++|||+||.||..++...+. .+..++.++++
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 33444555555444 45789999999999999999998755 56667777754
No 133
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.41 E-value=0.00039 Score=61.94 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=56.9
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-------CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-------~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
--||++..|-||+|..........-...|.+...+|+..|++.+.. .+++++|-|+||++|.-+-.+||+.|.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ 139 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFD 139 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-S
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeE
Confidence 4689999999999964321111123456889999999999877641 379999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+.+.-+++.
T Consensus 140 ga~ASSapv 148 (434)
T PF05577_consen 140 GAWASSAPV 148 (434)
T ss_dssp EEEEET--C
T ss_pred EEEecccee
Confidence 998877654
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.37 E-value=0.00062 Score=58.39 Aligned_cols=79 Identities=15% Similarity=0.150 Sum_probs=44.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---------------HHHHHHh------cCCCeEEEEcCh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL---------------NDFCKDV------VKDQAFFICNSI 62 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl---------------~~~~~~l------~~~~~~lvGhS~ 62 (261)
..+|-|+++|.+|+|+....... .....++...++.-+ ...++-| ..+++-++|+||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~--~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSm 235 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGA--AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSM 235 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCC--TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGG
T ss_pred hCCCEEEEEcccccccccccccc--ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecc
Confidence 36799999999999987643211 111223322222211 1122222 125799999999
Q ss_pred hHHHHHHHHhhCcccccceEEee
Q 024900 63 GGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
||..++.+|+.. ++|+..|..+
T Consensus 236 Gg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 236 GGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp GHHHHHHHHHH--TT--EEEEES
T ss_pred cHHHHHHHHHcc-hhhHhHhhhh
Confidence 999999999987 5788877655
No 135
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.31 E-value=0.0004 Score=56.77 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=49.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----h------cCCCeEEEEcChhHHHHHHHHh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-----V------VKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-----l------~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
+-+|-|+++|+...+.-.... ..+. +.++.+++.+ + ...++.|.|||-||-+|+.+++
T Consensus 42 ShGyIVV~~d~~~~~~~~~~~----------~~~~-~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al 110 (259)
T PF12740_consen 42 SHGYIVVAPDLYSIGGPDDTD----------EVAS-AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMAL 110 (259)
T ss_pred hCceEEEEecccccCCCCcch----------hHHH-HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHh
Confidence 357999999977654422110 1122 2233333221 1 2357899999999999999999
Q ss_pred hC-----cccccceEEeecc
Q 024900 73 ME-----PEICRGMILLNIS 87 (261)
Q Consensus 73 ~~-----p~~v~~lv~~~~~ 87 (261)
.+ +.++++++++|+.
T Consensus 111 ~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 111 GNASSSLDLRFSALILLDPV 130 (259)
T ss_pred hhcccccccceeEEEEeccc
Confidence 87 6689999999974
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.24 E-value=0.00077 Score=59.46 Aligned_cols=51 Identities=22% Similarity=0.188 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 37 ETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
..++++|.-++++. ..++..|.|+||||..|+.+++.+|+.+..++.++++
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666654 2346889999999999999999999999999999975
No 137
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.16 E-value=0.00067 Score=53.97 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=46.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HHH-----hcCCCeEEEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF----CKD-----VVKDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~----~~~-----l~~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.++.|+.+|+|=.-+. ++.+..+|+.+. ++. ...++++|+|+|-||.+++.++....
T Consensus 28 ~g~~v~~~~Yrl~p~~--------------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~ 93 (211)
T PF07859_consen 28 RGFVVVSIDYRLAPEA--------------PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRAR 93 (211)
T ss_dssp HTSEEEEEE---TTTS--------------STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred ccEEEEEeeccccccc--------------cccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhh
Confidence 5799999999943222 233444444433 333 23468999999999999999998654
Q ss_pred c----cccceEEeecc
Q 024900 76 E----ICRGMILLNIS 87 (261)
Q Consensus 76 ~----~v~~lv~~~~~ 87 (261)
+ .+++++++++.
T Consensus 94 ~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 94 DRGLPKPKGIILISPW 109 (211)
T ss_dssp HTTTCHESEEEEESCH
T ss_pred hhcccchhhhhccccc
Confidence 4 38999988874
No 138
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.16 E-value=0.00085 Score=49.73 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
...+.+.+++++....++++.|||+||.+|..+++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3345555555555556799999999999999999864
No 139
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.11 E-value=0.00092 Score=58.64 Aligned_cols=52 Identities=17% Similarity=0.338 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcc------cccceEEeecchh
Q 024900 38 TWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE------ICRGMILLNISLR 89 (261)
Q Consensus 38 ~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lv~~~~~~~ 89 (261)
.+...|..+|+.. ..++++||||||||.++..+-...+. .|+++|.++++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 4455555555444 35799999999999999998887642 5999999997654
No 140
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.09 E-value=0.0032 Score=50.57 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=36.7
Q ss_pred HHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 45 DFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 45 ~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.++.+..+ .++.+.|+|.||+.+..+++.|||.+.++.++++.+
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 34445554 489999999999999999999999999998887653
No 141
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.07 E-value=0.0015 Score=53.45 Aligned_cols=49 Identities=18% Similarity=0.284 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhc-C--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 39 WASQLNDFCKDVV-K--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 39 ~a~dl~~~~~~l~-~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+.++|..+|++.- . .+..|.|+||||..|+.++++||+...+++.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3456666665542 2 23799999999999999999999999999999975
No 142
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.05 E-value=0.0012 Score=56.21 Aligned_cols=56 Identities=21% Similarity=0.139 Sum_probs=42.5
Q ss_pred ccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCc--cEEEcCCCCCCCCCCChhhH
Q 024900 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVE--DFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 179 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~--~~~~i~~~gH~~~~e~p~~~ 234 (261)
.-+.+++.|++++.|..|.+.|....... ....++. -+..++++.|+-..|-++++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 45788999999999999998777654322 2233433 57889999999998888875
No 143
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.04 E-value=0.0015 Score=58.67 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=38.0
Q ss_pred CCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCC
Q 024900 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 181 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~ 228 (261)
+-.++.|||+|.|..|..++++..+.+++ +....++++|.+++|..-.
T Consensus 300 Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 300 LLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 34467899999999999999887666553 4445689999999999664
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.03 E-value=0.0015 Score=55.84 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=47.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~--~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
+++.|++.|....-...... .........+.|..++..| + .++++|||||+||.||-.++.....
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~-------a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ 175 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ-------AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGG 175 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH-------HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT--
T ss_pred CCceEEEEcchhhccccccc-------hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcc
Confidence 47899999975432211000 0012233344444444443 2 4689999999999999999998766
Q ss_pred cccceEEeecchhh
Q 024900 77 ICRGMILLNISLRM 90 (261)
Q Consensus 77 ~v~~lv~~~~~~~~ 90 (261)
+|.+++-+|++...
T Consensus 176 ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 176 KIGRITGLDPAGPL 189 (331)
T ss_dssp -SSEEEEES-B-TT
T ss_pred eeeEEEecCccccc
Confidence 89999999986443
No 145
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.95 E-value=0.0021 Score=55.29 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc--ccccceEEeecchh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNISLR 89 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lv~~~~~~~ 89 (261)
.-+.+.+.|.+.+...+.+++.|+||||||.+..-++...+ .+|++++.++++-.
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 34455555666666667789999999999999998888887 89999999997643
No 146
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.87 E-value=0.073 Score=45.60 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=43.0
Q ss_pred CCCCCC-EEEEecCCCCCCCchh--hhhhccCCCCccEEEcCCCCCCCCCCChh-----hHHHHHHHHHHh
Q 024900 182 PQVKCP-VLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQDEAPH-----LVNPLVESFVTR 244 (261)
Q Consensus 182 ~~i~~P-vlii~G~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~~~e~p~-----~~~~~l~~fl~~ 244 (261)
....+| ++++.++.|.+..... ++.++...-..++.++++++|..++-.|. ++.+.+.+|+++
T Consensus 264 ~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 264 SGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred cccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 344555 9999999998765432 34455554345677899999998765554 456666777765
No 147
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.77 E-value=0.0032 Score=50.77 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=29.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhC----cccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVME----PEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lv~~~~~ 87 (261)
+++.+.|||.||.+|...|+.. .++|.+++..|++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 4699999999999999999873 4578888888875
No 148
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.75 E-value=0.09 Score=42.79 Aligned_cols=60 Identities=17% Similarity=0.152 Sum_probs=46.9
Q ss_pred CCCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCCC-CChhhHHHHHHHHH
Q 024900 183 QVKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQD-EAPHLVNPLVESFV 242 (261)
Q Consensus 183 ~i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~l~~fl 242 (261)
..++|-|+|.++.|.+++.+..+.. ++..-..+...+++++|..|+ ++|++..+.+.+||
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4569999999999999998754332 223223577788999999885 88999999999885
No 149
>PRK04940 hypothetical protein; Provisional
Probab=96.61 E-value=0.0075 Score=46.63 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 38 TWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
...+.+.+.+..+.. +++.|||.|+||+.|..+|.++. ++ .|++|+...
T Consensus 41 ~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~ 93 (180)
T PRK04940 41 HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLF 93 (180)
T ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCC
Confidence 334445555553221 57999999999999999999985 44 557888643
No 150
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.60 E-value=0.021 Score=50.06 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=55.6
Q ss_pred CCCeEEEecCCCCCCCCCC---CC---CCCCCCCCCCHHHH-HHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLIGYGYSDKP---NP---RDFFDKPFYTFETW-ASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~---~~---~~~~~~~~~~~~~~-a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.+|-|-.-..||--.|.+- ++ ..+. .+++.++ .-||-++|+.. +.++.+.||||-|+...+.+...
T Consensus 105 aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW---~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~ 181 (403)
T KOG2624|consen 105 AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFW---DFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE 181 (403)
T ss_pred cCCceeeecCcCcccchhhcccCCcCCccee---ecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc
Confidence 5688888888887777531 11 1111 2345443 23444444433 55789999999999999999998
Q ss_pred Ccc---cccceEEeecchhh
Q 024900 74 EPE---ICRGMILLNISLRM 90 (261)
Q Consensus 74 ~p~---~v~~lv~~~~~~~~ 90 (261)
.|+ +|+..+++.+...+
T Consensus 182 ~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 182 RPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cchhhhhhheeeeecchhhh
Confidence 776 78999988876543
No 151
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.60 E-value=0.023 Score=54.09 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=53.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
-..++-|+.+|.||-|-....-... ...-.....++...-+..+++..-+ +++.+.|+|.||++++.+....|+.+-
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~f 634 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVF 634 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceE
Confidence 3467899999999998664321000 0011123445554444444443322 479999999999999999999986655
Q ss_pred ce-EEeec
Q 024900 80 GM-ILLNI 86 (261)
Q Consensus 80 ~l-v~~~~ 86 (261)
+- +.+.+
T Consensus 635 kcgvavaP 642 (755)
T KOG2100|consen 635 KCGVAVAP 642 (755)
T ss_pred EEEEEecc
Confidence 55 65554
No 152
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.60 E-value=0.0033 Score=50.55 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~ 72 (261)
+++++|.+.++.... .++++|||||||.|+-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 344444444444444 37999999999999865444
No 153
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.59 E-value=0.0044 Score=50.17 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=20.2
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..++++.|||+||.+|..+|+..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45799999999999999998864
No 154
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.56 E-value=0.005 Score=55.63 Aligned_cols=79 Identities=16% Similarity=0.073 Sum_probs=58.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT--FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~--~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+.+|-|+..|.||.|.|+.-- .. .++ .++ .-|+.+++.+.-. ++|-.+|.|++|+-.+.+|+..|..+
T Consensus 77 aa~GYavV~qDvRG~~~SeG~~-~~-----~~~~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaL 149 (563)
T COG2936 77 AAQGYAVVNQDVRGRGGSEGVF-DP-----ESSREAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPAL 149 (563)
T ss_pred ecCceEEEEecccccccCCccc-ce-----eccccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchh
Confidence 4678999999999999998421 11 111 122 2355566665543 58999999999999999999998889
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+.++...+..
T Consensus 150 kai~p~~~~~ 159 (563)
T COG2936 150 KAIAPTEGLV 159 (563)
T ss_pred eeeccccccc
Confidence 9998877643
No 155
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.55 E-value=0.0056 Score=47.59 Aligned_cols=71 Identities=23% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc----
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE---- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~---- 76 (261)
+++-|+.+|-+=|=-+.+ |.+..++|+.++++.. +.+++.|||.|+|+-|.--...+.|+
T Consensus 28 ~G~~VvGvdsl~Yfw~~r------------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~ 95 (192)
T PF06057_consen 28 QGVPVVGVDSLRYFWSER------------TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRA 95 (192)
T ss_pred CCCeEEEechHHHHhhhC------------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHh
Confidence 678899888877776654 3456677777776655 56789999999999877776665544
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
+|.+++++++.
T Consensus 96 ~v~~v~Ll~p~ 106 (192)
T PF06057_consen 96 RVAQVVLLSPS 106 (192)
T ss_pred heeEEEEeccC
Confidence 68888888865
No 156
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.53 E-value=0.0047 Score=50.48 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=33.8
Q ss_pred CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.++-.++|||+||.+++..-+.+|+.....++++++.
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3568999999999999999999999999999999864
No 157
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.51 E-value=0.0099 Score=47.72 Aligned_cols=73 Identities=16% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCCCe---EEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 4 AKSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 4 ~~~~~---V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+.+|+ |++++.-....+.... ......+.+.+|.+|+++ -+. +|+||||||||+++-.+.... .
T Consensus 27 ~~GY~~~~vya~tyg~~~~~~~~~-------~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~ 97 (219)
T PF01674_consen 27 AAGYCDSEVYALTYGSGNGSPSVQ-------NAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-G 97 (219)
T ss_dssp HTT--CCCEEEE--S-CCHHTHHH-------HHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-T
T ss_pred HcCCCcceeEeccCCCCCCCCccc-------ccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-C
Confidence 46777 7988874443322110 001122334556655544 456 999999999999998887644 3
Q ss_pred cccceEEee
Q 024900 77 ICRGMILLN 85 (261)
Q Consensus 77 ~v~~lv~~~ 85 (261)
.++..+-+.
T Consensus 98 ~~d~~~~lg 106 (219)
T PF01674_consen 98 GADKVVNLG 106 (219)
T ss_dssp GGGTEEE--
T ss_pred CCCcccCcc
Confidence 344444443
No 158
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.49 E-value=0.0071 Score=47.90 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=44.1
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
..|++|+|-|.|+.|.++|.+.+..+.+..+++.+..- .+||+.+-.+ .+.+-+.+|++.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~H-pggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEH-PGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEec-CCCccCCCch--HHHHHHHHHHHH
Confidence 46899999999999999999887778777776655444 5599977555 444555555543
No 159
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.44 E-value=0.0058 Score=49.72 Aligned_cols=77 Identities=14% Similarity=0.068 Sum_probs=46.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhhCc-
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVMEP- 75 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p- 75 (261)
+-+|=|+++++-.- . .++..+ +.-+.+..++.+.+-+..+ ++.++.++|||+||..|+.+|+.+.
T Consensus 71 SHGfIVVAPQl~~~--~-~p~~~~----Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~ 143 (307)
T PF07224_consen 71 SHGFIVVAPQLYTL--F-PPDGQD----EIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYAT 143 (307)
T ss_pred hcCeEEEechhhcc--c-CCCchH----HHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccc
Confidence 45788999999753 1 122110 1112222222222222222 2358999999999999999999873
Q ss_pred -ccccceEEeecc
Q 024900 76 -EICRGMILLNIS 87 (261)
Q Consensus 76 -~~v~~lv~~~~~ 87 (261)
-.+.+||.+|+.
T Consensus 144 ~lkfsaLIGiDPV 156 (307)
T PF07224_consen 144 SLKFSALIGIDPV 156 (307)
T ss_pred cCchhheeccccc
Confidence 247788888764
No 160
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.36 E-value=0.14 Score=40.88 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=28.3
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhh
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~ 90 (261)
+.++++||++|||-.+|..+....| ++.-|.+++.+.+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 3578999999999999988755443 6666777775544
No 161
>PLN02162 triacylglycerol lipase
Probab=96.35 E-value=0.0083 Score=52.90 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
...+++.+++.+....++++.|||+||.+|..+|+
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33444555555544568999999999999999865
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=96.35 E-value=0.0087 Score=50.79 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=42.4
Q ss_pred CCHHHH-HHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 34 YTFETW-ASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 34 ~~~~~~-a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
|.++++ ..+|-..+++... .+-.++||||||+=|+.+|+.+|++.+.+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 677776 4455544443332 268999999999999999999999999999888754
No 163
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.29 E-value=0.012 Score=45.64 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 36 FETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
-+.-+.+|..|++.|.. ....++|||+|+.++-..+...+..+..+|+++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 34556777777776642 36899999999999988887767889999999875
No 164
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.17 E-value=0.084 Score=41.50 Aligned_cols=56 Identities=23% Similarity=0.553 Sum_probs=42.2
Q ss_pred CCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
..|.+.-||+.|+++|..-.+. +.......++..+++.+|. ..|+++.+ +..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~---~~~~e~~~-~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS---TSPQELDD-LKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc---ccHHHHHH-HHHHHHH
Confidence 6799999999999999875433 4444444789999999999 67777764 4447765
No 165
>PLN00413 triacylglycerol lipase
Probab=96.16 E-value=0.013 Score=51.81 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
...+.+.++++.....++++.|||+||.+|..+|+
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556666676665668999999999999999885
No 166
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.0078 Score=54.68 Aligned_cols=80 Identities=19% Similarity=0.054 Sum_probs=55.7
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~-~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
-+.+|-|+.+|-||.-+-.....+-+. .-....+++.++-+.-+.++.| .+++.+-|||+||++++..-.+||+-.
T Consensus 673 aslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~If 752 (867)
T KOG2281|consen 673 ASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIF 752 (867)
T ss_pred hhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCccee
Confidence 357899999999997665422100000 0012356777777766677765 368999999999999999999999866
Q ss_pred cceE
Q 024900 79 RGMI 82 (261)
Q Consensus 79 ~~lv 82 (261)
+..|
T Consensus 753 rvAI 756 (867)
T KOG2281|consen 753 RVAI 756 (867)
T ss_pred eEEe
Confidence 5443
No 167
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.05 E-value=0.11 Score=41.40 Aligned_cols=52 Identities=12% Similarity=0.062 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHh--hCcccccceEEeec
Q 024900 35 TFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAV--MEPEICRGMILLNI 86 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~--~~p~~v~~lv~~~~ 86 (261)
++.+-++||..++++++. ++++|+|||-|+-=.+-|.. ..|..|++.|+..+
T Consensus 85 slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 85 SLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred cccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 556668889998987764 37999999999986655552 34666777666554
No 168
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.99 E-value=0.0099 Score=48.34 Aligned_cols=74 Identities=16% Similarity=0.021 Sum_probs=47.0
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh----Cc----
Q 024900 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM----EP---- 75 (261)
Q Consensus 8 ~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~----~p---- 75 (261)
.|+.|.-|+.|.-..... ...+...-...+.+++..| +.++++|++||||+.|.++.... .+
T Consensus 50 ~~i~FsWPS~g~~~~Y~~------d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~ 123 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFY------DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDV 123 (233)
T ss_pred eEEEEEcCCCCChhhhhh------hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhh
Confidence 789999998886422110 0112333344555555554 46789999999999999887553 21
Q ss_pred -ccccceEEeecc
Q 024900 76 -EICRGMILLNIS 87 (261)
Q Consensus 76 -~~v~~lv~~~~~ 87 (261)
.++..+|++.+.
T Consensus 124 ~~~~~~viL~ApD 136 (233)
T PF05990_consen 124 KARFDNVILAAPD 136 (233)
T ss_pred HhhhheEEEECCC
Confidence 256777777653
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.92 E-value=0.011 Score=54.94 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=26.0
Q ss_pred CeEEEEcChhHHHHHHHHhh---CcccccceEEeecc
Q 024900 54 QAFFICNSIGGLVGLQAAVM---EPEICRGMILLNIS 87 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~---~p~~v~~lv~~~~~ 87 (261)
.++||||||||.||...+.. .+..|.-++..+++
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 39999999999999887763 25567777776664
No 170
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.88 E-value=0.031 Score=49.33 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=54.1
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+|+.+|+| |.|-|....... ...+.++.++|+.+++..+ ...+++|.|-|+||.-+-.+|..
T Consensus 84 ~~an~l~iD~PvGtGfS~~~~~~~----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGNDPSD----YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp GTSEEEEE--STTSTT-EESSGGG----GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccceEEEeecCceEEeecccccc----ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 56899999955 999996433211 2347788899998887765 23489999999999976666552
Q ss_pred -C------cccccceEEeecch
Q 024900 74 -E------PEICRGMILLNISL 88 (261)
Q Consensus 74 -~------p~~v~~lv~~~~~~ 88 (261)
. +-.++|+++.|+..
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-S
T ss_pred ccccccccccccccceecCccc
Confidence 3 33488998888643
No 171
>PLN02571 triacylglycerol lipase
Probab=95.84 E-value=0.014 Score=50.98 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhh
Q 024900 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 73 (261)
++.++|..+++....+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445555656554433 68999999999999998875
No 172
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.81 E-value=0.02 Score=49.55 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=53.1
Q ss_pred CeEEEecCCCCCCCCCCCCC---CCCCCCCCC----HHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 7 HRVYSIDLIGYGYSDKPNPR---DFFDKPFYT----FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~---~~~~~~~~~----~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
--+|....|=||+|-.--.+ +.......| ++++|..|..+...++. .+++.+|-|+|||++.=+=.+||+.
T Consensus 112 AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 45788899999999532111 001112233 44444444444333332 4799999999999999999999999
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
|.|...-+.+
T Consensus 192 v~GAlAaSAP 201 (492)
T KOG2183|consen 192 VLGALAASAP 201 (492)
T ss_pred hhhhhhccCc
Confidence 9988666654
No 173
>PLN02454 triacylglycerol lipase
Probab=95.80 E-value=0.017 Score=50.50 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=18.1
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.||||||.+|...|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 39999999999999999874
No 174
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.74 E-value=0.012 Score=51.65 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.1
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCcc--------cccceEEeecch
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPE--------ICRGMILLNISL 88 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lv~~~~~~ 88 (261)
|.++++||+|||||.+.+.+..++++ .+++++-++++.
T Consensus 180 G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 180 GGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred CCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 44899999999999999999988876 477777776543
No 175
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.45 E-value=0.025 Score=51.43 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=29.5
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC---------------cccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME---------------PEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~---------------p~~v~~lv~~~~~~ 88 (261)
.++++||||||||.+++.+-..- -..|++.|.++++.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 57999999999999999976532 23588999988764
No 176
>PLN02408 phospholipase A1
Probab=95.39 E-value=0.027 Score=48.48 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhC
Q 024900 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 41 ~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 74 (261)
++|..+++....+ ++++.|||+||.+|...|...
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4444555544433 489999999999999998853
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.36 E-value=0.036 Score=45.90 Aligned_cols=65 Identities=22% Similarity=0.422 Sum_probs=45.6
Q ss_pred CCCCC-CCEEEEecCCCCCCCchhhhh-hccCCC-CccEEEcCCCCCCCCCCChh---hHHHHHHHHHHhc
Q 024900 181 LPQVK-CPVLIAWGDKDPWEPIELGRA-YGNFDS-VEDFIVLPNVGHCPQDEAPH---LVNPLVESFVTRH 245 (261)
Q Consensus 181 l~~i~-~Pvlii~G~~D~~~~~~~~~~-~~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~l~~fl~~~ 245 (261)
+.++. +|+|+++|.+|..+|...+.. +..... ..+..++++++|......+. +....+.+|+.++
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34454 899999999999999887654 333322 35777889999997754433 5666677787664
No 178
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.32 E-value=0.0071 Score=52.85 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=25.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+++.++|||+||.-+++.+... .+++..|++|++.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 4689999999999999888766 6799999999864
No 179
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.24 E-value=0.061 Score=47.68 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=64.0
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-------CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-------~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+-.|+....|=||+|.....-....-...+......||.++|++++. .+.+.+|-|+-|.++.-+=..|||.|
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 45799999999999954321111122345777888899999988864 27889999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
.|-|..+++.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 9998877664
No 180
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.03 E-value=0.041 Score=47.17 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=29.6
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCccc-----ccceEEeecch
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPEI-----CRGMILLNISL 88 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~~-----v~~lv~~~~~~ 88 (261)
+..+++|||||+|+.+.+.+.....++ |..+++++++.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 556899999999999998876654443 78888887653
No 181
>PLN02934 triacylglycerol lipase
Probab=95.02 E-value=0.04 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
.....+.+++++....++++.|||+||.+|..+|+
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555666666655668999999999999999985
No 182
>PLN02324 triacylglycerol lipase
Probab=94.90 E-value=0.045 Score=47.82 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhh
Q 024900 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 41 ~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 73 (261)
++|..+++....+ ++++.|||+||.+|...|..
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3344555544332 59999999999999999874
No 183
>PLN02310 triacylglycerol lipase
Probab=94.89 E-value=0.069 Score=46.65 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhc---C-CCeEEEEcChhHHHHHHHHhh
Q 024900 40 ASQLNDFCKDVV---K-DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 40 a~dl~~~~~~l~---~-~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++|..+++.+. . -++++.|||+||.+|...|..
T Consensus 192 l~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 192 MQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344455555442 1 269999999999999988864
No 184
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=94.82 E-value=0.04 Score=44.68 Aligned_cols=44 Identities=14% Similarity=-0.015 Sum_probs=33.1
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-----cccceEEeecch
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISL 88 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~ 88 (261)
.+.++.++.++.+|||||||.=...|+..|-. .+..+|.+++++
T Consensus 128 yL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 128 YLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 33444567899999999999988888875422 488888888754
No 185
>PLN02802 triacylglycerol lipase
Probab=94.68 E-value=0.052 Score=48.53 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhC
Q 024900 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 40 a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.++|..+++....+ ++++.|||+||.+|...|...
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 33445555544333 689999999999999988753
No 186
>KOG3101 consensus Esterase D [General function prediction only]
Probab=94.64 E-value=0.0056 Score=48.13 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHHHhc-------CCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 33 FYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.|.+.+|+ ..++.+.++ ..++.|.||||||.=|+..+++.|.+.+++..+.+
T Consensus 116 ~yrMYdYv--~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 116 HYRMYDYV--VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred hhhHHHHH--HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 35555553 234444333 24789999999999999999999999888765543
No 187
>PLN02753 triacylglycerol lipase
Probab=94.39 E-value=0.066 Score=48.05 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=18.8
Q ss_pred CCeEEEEcChhHHHHHHHHhh
Q 024900 53 DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~ 73 (261)
-++++.|||+||.+|...|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 379999999999999999864
No 188
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.38 E-value=0.16 Score=42.27 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 40 a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
++-+..++.+.+++ +|.+.|.|-||..+..+++.+|+...++.++.+..
T Consensus 129 r~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 129 RALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 33334445555665 79999999999999999999999999999888653
No 189
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.25 E-value=0.037 Score=48.81 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=40.7
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-CCC------------------------ccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-DSV------------------------EDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~------------------------~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
.++|||..|..|.++|....+. +.++ .+. -++..|.+|||+.+.++|+....++
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999888654322 2221 111 1478889999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
+.|++
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
No 190
>COG3150 Predicted esterase [General function prediction only]
Probab=94.17 E-value=0.13 Score=39.13 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+....++.+..++..++.+...|||-|+||+.|..++.++- ++++ ++|+..
T Consensus 41 ~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--irav-~~NPav 91 (191)
T COG3150 41 DPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRAV-VFNPAV 91 (191)
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chhh-hcCCCc
Confidence 57788889999999988888999999999999999999873 6666 467654
No 191
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.15 E-value=1 Score=38.78 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=45.6
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++.+|..||.|..|.+.++..+..|-. ++...-+..+|+..|. ..+.-+...|..|+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~---~~n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHN---LINQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcch---hhHHHHHHHHHHHHHHH
Confidence 5678999999999999888887766544 4444567888999998 55666667777777643
No 192
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.13 E-value=0.095 Score=43.61 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=34.8
Q ss_pred HHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 47 CKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 47 ~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.++.++ +++.++|.|+||+-++.++..+|+..++.+.+++
T Consensus 261 as~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 261 ASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred hhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 344454 4799999999999999999999999999999886
No 193
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.12 E-value=0.074 Score=44.28 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=31.4
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
..-+|.|-|+||.+++..++.||+.+..++..++.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 35779999999999999999999999999887764
No 194
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.09 E-value=0.091 Score=47.59 Aligned_cols=77 Identities=16% Similarity=0.030 Sum_probs=49.6
Q ss_pred CeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhh--Cc
Q 024900 7 HRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EP 75 (261)
Q Consensus 7 ~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~---dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~--~p 75 (261)
+-|++++.| ||+.+..... ...+.+.+... -+.+-+...++ ++++|.|+|-||..+..++.. .+
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~-----~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~ 200 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIEL-----PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSK 200 (493)
T ss_pred EEEEEecccccccccccCCCCCC-----CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchh
Confidence 788888888 5554432110 01233444332 22333555555 479999999999999888875 35
Q ss_pred ccccceEEeecch
Q 024900 76 EICRGMILLNISL 88 (261)
Q Consensus 76 ~~v~~lv~~~~~~ 88 (261)
.+++++|++++..
T Consensus 201 ~lf~~~i~~sg~~ 213 (493)
T cd00312 201 GLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHhhhcCCc
Confidence 6799999888654
No 195
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.97 E-value=0.09 Score=47.17 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhc---C-CCeEEEEcChhHHHHHHHHhh
Q 024900 40 ASQLNDFCKDVV---K-DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 40 a~dl~~~~~~l~---~-~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++|..+++.+. . -++++.|||+||.+|...|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345555555443 1 269999999999999998864
No 196
>PLN02719 triacylglycerol lipase
Probab=93.92 E-value=0.093 Score=47.01 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=18.3
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.|||+||.+|...|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999998864
No 197
>PLN02761 lipase class 3 family protein
Probab=93.73 E-value=0.11 Score=46.73 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=18.0
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.|||+||.+|...|..
T Consensus 295 sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYD 314 (527)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 69999999999999988863
No 198
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.59 E-value=0.22 Score=42.38 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=33.3
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccceEEeecc
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNIS 87 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~ 87 (261)
....+..+++||||..|+..+.++.+..+. .+++||++++.
T Consensus 187 ~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 187 AQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 333455569999999999999999998754 59999999963
No 199
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.55 E-value=0.11 Score=44.57 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 37 ~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777777777776689999999999999998874
No 200
>PLN02847 triacylglycerol lipase
Probab=93.41 E-value=0.14 Score=46.76 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=19.0
Q ss_pred CCeEEEEcChhHHHHHHHHhh
Q 024900 53 DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~ 73 (261)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999999875
No 201
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.30 E-value=0.36 Score=41.21 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=42.6
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC------------------------CCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF------------------------DSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|.+++.-..+. +..+ .++-++..+.+|||+.+ ++|+....++.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999998777643221 1111 01135677789999997 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.24 E-value=0.2 Score=38.94 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=30.3
Q ss_pred CCCeEEEEcChhHHHHHHHHhh------CcccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVM------EPEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lv~~~~~~ 88 (261)
..+++|+|.|-|+.|+..++.. ..++|.++|+++-+.
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 4589999999999999999876 456889999987553
No 203
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.91 E-value=0.17 Score=43.23 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
|+-..+..-|..+.+....++++|++||||..+.++...
T Consensus 172 ~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 172 YSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred hhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHH
Confidence 444444444444444445678999999999999887644
No 204
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.83 E-value=0.24 Score=42.28 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=47.4
Q ss_pred CeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh----C
Q 024900 7 HRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM----E 74 (261)
Q Consensus 7 ~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~ 74 (261)
.+|+.+|.| |-|-|-...+. ...+-+..++|+..++..+ ...+++|.|-|+||.-+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~-----~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n 76 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPI-----DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 76 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCC-----CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhc
Confidence 478999999 88888532211 1112223446666655543 23579999999999966666552 1
Q ss_pred ------cccccceEEeecc
Q 024900 75 ------PEICRGMILLNIS 87 (261)
Q Consensus 75 ------p~~v~~lv~~~~~ 87 (261)
+=.++|+++-++.
T Consensus 77 ~~~~~~~inLkGi~IGNg~ 95 (319)
T PLN02213 77 YICCEPPINLQGYMLGNPV 95 (319)
T ss_pred ccccCCceeeeEEEeCCCC
Confidence 1246788777753
No 205
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=92.54 E-value=0.28 Score=42.76 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.4
Q ss_pred CeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++++|+|.||++|...|.-.|..+++++=-+++
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999999998755554
No 206
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.05 E-value=0.28 Score=37.47 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=34.8
Q ss_pred HHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 48 KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 48 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+.....+..+-|.||||.-|..+..++|+...++|.+++..
T Consensus 96 eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 96 EEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 33334568889999999999999999999999999998754
No 207
>PLN02633 palmitoyl protein thioesterase family protein
Probab=90.91 E-value=0.72 Score=38.87 Aligned_cols=56 Identities=14% Similarity=-0.033 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecchhh
Q 024900 35 TFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~~ 90 (261)
++.+.++.+++-+.... .+-+++||+|=||.++-.++.+.|+ .|+.+|.++++..+
T Consensus 74 ~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 74 PLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred CHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 56666666655444321 2359999999999999999999987 59999999986543
No 208
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.76 E-value=0.39 Score=43.73 Aligned_cols=54 Identities=20% Similarity=0.385 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhh-----Ccc------cccceEEeecch
Q 024900 35 TFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM-----EPE------ICRGMILLNISL 88 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~-----~p~------~v~~lv~~~~~~ 88 (261)
++..-.+.+.+.+.+.++ .+++.|||||||.++=.+.+. .|+ -.+|+++++.+.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 444445555555555544 479999999999987766543 232 356677777654
No 209
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=90.50 E-value=0.66 Score=41.40 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=43.4
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C-----------------------CCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D-----------------------SVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|.++|....+. +..+ . ++-++..+.+|||+.+ .+|+....++.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999887754332 1111 0 0124677889999997 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
No 210
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.32 E-value=0.69 Score=36.73 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhC
Q 024900 36 FETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+..+-...++++.+. .+++|+|||=|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 33444444455666654 5899999999999999998754
No 211
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=89.72 E-value=1.1 Score=40.01 Aligned_cols=77 Identities=18% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+|+.+| .-|.|-|....... ..-+. +.++++.+++... ...+++|.|.|+||.-+-.+|..
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~----~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPID----KTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCC----ccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 457899999 77999985332111 01122 2335555555443 23579999999999966666542
Q ss_pred -C------cccccceEEeec
Q 024900 74 -E------PEICRGMILLNI 86 (261)
Q Consensus 74 -~------p~~v~~lv~~~~ 86 (261)
. +-.++|+++-++
T Consensus 189 ~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 189 GNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred hcccccCCcccceeeEecCC
Confidence 1 125778877775
No 212
>PLN02209 serine carboxypeptidase
Probab=89.72 E-value=0.78 Score=40.97 Aligned_cols=59 Identities=20% Similarity=0.253 Sum_probs=43.3
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C----------------------CC-ccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D----------------------SV-EDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~----------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|..++....+. +..+ . .+ -++..+.+|||+.+ .+|++-..+++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999888754322 1111 0 11 24667889999996 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 213
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=89.31 E-value=0.18 Score=42.34 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=33.3
Q ss_pred HHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhh
Q 024900 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRML 91 (261)
Q Consensus 44 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~ 91 (261)
..+...+.-.++.++|||.||.-+....+.+. ..+.-|++|++..+.
T Consensus 232 ~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~Pl 278 (399)
T KOG3847|consen 232 EQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMFPL 278 (399)
T ss_pred HHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeeccc
Confidence 33444455567999999999998887776654 566677888876543
No 214
>PLN02209 serine carboxypeptidase
Probab=89.23 E-value=1.2 Score=39.78 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+++.+| ..|.|-|...... ...+-++.++|+.+++... ...+++|.|.|+||.-+-.+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~-----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPI-----ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCC-----CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 457899999 7788988532211 1112234456676666553 23479999999999855555542
Q ss_pred -C------cccccceEEeecc
Q 024900 74 -E------PEICRGMILLNIS 87 (261)
Q Consensus 74 -~------p~~v~~lv~~~~~ 87 (261)
. +=.++|+++.++.
T Consensus 191 ~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred hcccccCCceeeeeEEecCcc
Confidence 1 1246788777753
No 215
>PLN02606 palmitoyl-protein thioesterase
Probab=89.19 E-value=1.2 Score=37.55 Aligned_cols=56 Identities=14% Similarity=0.010 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecchhh
Q 024900 35 TFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~~ 90 (261)
++.+.++.+++-+.... .+-+++||+|=||.++-.++.++|+ .|+.+|.++++..+
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 55666665555443311 2359999999999999999999987 59999999986543
No 216
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=88.91 E-value=0.73 Score=41.17 Aligned_cols=61 Identities=21% Similarity=0.268 Sum_probs=45.8
Q ss_pred CCCEEEEecCCCCCCCchhhhhh-ccC------------CC------------CccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRAY-GNF------------DS------------VEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~~-~~~------------~~------------~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
..++||..|+.|..+|.-..+.. ..+ .+ +-.+..+.||||+.+.++|+.-..++.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 37999999999999887654431 110 00 013467889999999999999999999
Q ss_pred HHHHhc
Q 024900 240 SFVTRH 245 (261)
Q Consensus 240 ~fl~~~ 245 (261)
.|+...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999753
No 217
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=88.85 E-value=12 Score=35.06 Aligned_cols=52 Identities=25% Similarity=0.336 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 34 YTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.|+.++.+-...+++. +. +.+.++|-|-||+++...+.+.|+..+++|.-.+
T Consensus 506 NTf~DFIa~a~~Lv~~-g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 506 NTFTDFIAAARHLVKE-GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred ccHHHHHHHHHHHHHc-CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 4777777655555543 32 4699999999999999999999999999986443
No 218
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=87.86 E-value=0.61 Score=37.98 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.0
Q ss_pred CeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
++.-||||||+.+-+.+...++..-++-++++-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 567899999999999998887666677777763
No 219
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=87.28 E-value=2.9 Score=36.41 Aligned_cols=57 Identities=12% Similarity=0.236 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh--Cc---ccccceEEeecchhhh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM--EP---EICRGMILLNISLRML 91 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~--~p---~~v~~lv~~~~~~~~~ 91 (261)
.+.+.++--..+++..|-++++|+|-|-||.+++.+... .+ -.=+++|+++++..+.
T Consensus 177 QL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 177 QLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 344555444555655677899999999999999988652 21 1246899999876654
No 220
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=86.84 E-value=2.3 Score=35.38 Aligned_cols=54 Identities=15% Similarity=-0.040 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc-cccceEEeecchh
Q 024900 36 FETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLR 89 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~~~ 89 (261)
+.+.++.+++.+..-. .+-+++||+|=||.+.-.++.++|+ .|+-+|.++++..
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 4555555555554422 2469999999999999999999865 5999999998654
No 221
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.44 E-value=1.1 Score=37.26 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=20.6
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
-.+++|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35799999999999999998876
No 222
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.44 E-value=1.1 Score=37.26 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=20.6
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
-.+++|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35799999999999999998876
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=85.55 E-value=2.9 Score=37.55 Aligned_cols=77 Identities=21% Similarity=0.149 Sum_probs=46.9
Q ss_pred CCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-------HHHhc--CCCeEEEEcChhHHHHHHHHhhCc
Q 024900 6 SHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-------CKDVV--KDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 6 ~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-------~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.-.++.+| .-|.|.|.....+ ..-+.....+|+..+ ..++. ..+.+|+|-|+||.-+-.+|..-.
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e-----~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDE-----KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred CCceEEEecCcccCcccccccc-----cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 45689999 7799999742111 111233333333322 22232 358999999999998888877544
Q ss_pred c---cccceEEeecc
Q 024900 76 E---ICRGMILLNIS 87 (261)
Q Consensus 76 ~---~v~~lv~~~~~ 87 (261)
+ ...++|.+++.
T Consensus 221 ~~~~~~~~~~nlssv 235 (498)
T COG2939 221 EDNIALNGNVNLSSV 235 (498)
T ss_pred HhccccCCceEeeee
Confidence 4 36677766653
No 224
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.50 E-value=1.1 Score=35.59 Aligned_cols=42 Identities=17% Similarity=0.259 Sum_probs=33.5
Q ss_pred HHHHhcCCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecc
Q 024900 46 FCKDVVKDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNIS 87 (261)
Q Consensus 46 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~ 87 (261)
++.....+.+.+|.||+||...+.+..++|+ +|-++.+.|++
T Consensus 183 ~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 183 IVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3444456789999999999999999998875 57777777765
No 225
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=81.60 E-value=2.5 Score=33.17 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=43.6
Q ss_pred CCC-CCCEEEEecCCCCCCCchhh---hhhc-cCCCC-ccEEEcCCCCCCCCCCCh---hhHHHHHHHHHHhc
Q 024900 182 PQV-KCPVLIAWGDKDPWEPIELG---RAYG-NFDSV-EDFIVLPNVGHCPQDEAP---HLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i-~~Pvlii~G~~D~~~~~~~~---~~~~-~~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~l~~fl~~~ 245 (261)
+.| +++.|-|-|+.|.++.+--. ..+. .+++. .+-+..+++||+-.+.=+ +++...|++|+.++
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 455 46677799999999877532 3342 33322 244677899999776443 67889999998763
No 226
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=81.40 E-value=0.57 Score=40.72 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHH
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQA 70 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~ 70 (261)
+.++++.+.+....++++.+||||+||.++--+
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEE
Confidence 335555665555667899999999999876544
No 227
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=77.32 E-value=1.2 Score=35.12 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCEEEEecCCCCCCCchh--hhhhccCCCCccEEEcCCCCCCC
Q 024900 186 CPVLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
.||++++|+.|.+++... .+.+++..-..+++.+++.+|..
T Consensus 167 Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp HEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred CCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 489999999998764322 23355554457899999999974
No 228
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=77.09 E-value=1.6 Score=38.29 Aligned_cols=76 Identities=18% Similarity=0.238 Sum_probs=60.5
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 8 ~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
+-+.+..|=||.|. |.+.++ ...|+...|.|...+++++. .++=+--|-|-||+-++-+=.-||+.|++.|--
T Consensus 90 NQl~vEhRfF~~Sr-P~p~DW---~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 90 NQLSVEHRFFGPSR-PEPADW---SYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred ceEEEEEeeccCCC-CCCCCc---ccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 45678899999995 444444 34689999999998888775 367778899999999988888899999999876
Q ss_pred ecc
Q 024900 85 NIS 87 (261)
Q Consensus 85 ~~~ 87 (261)
-.+
T Consensus 166 VAP 168 (448)
T PF05576_consen 166 VAP 168 (448)
T ss_pred ecc
Confidence 554
No 229
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=76.81 E-value=3.5 Score=37.52 Aligned_cols=44 Identities=16% Similarity=0.012 Sum_probs=31.5
Q ss_pred HHHHHhcC--CCeEEEEcChhHHHHHHHHhh--CcccccceEEeecch
Q 024900 45 DFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EPEICRGMILLNISL 88 (261)
Q Consensus 45 ~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~~ 88 (261)
+-|.++|+ +++.|.|||-||.-+..+... -..++++.|+.+++.
T Consensus 198 ~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 198 DNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 34556665 469999999999977666654 245799999999754
No 230
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=75.58 E-value=10 Score=29.97 Aligned_cols=51 Identities=14% Similarity=-0.102 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEcCh----hHHHHHHHHhhC-cccccceEEe
Q 024900 33 FYTFETWASQLNDFCKDVVKDQAFFICNSI----GGLVGLQAAVME-PEICRGMILL 84 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~----Gg~va~~~a~~~-p~~v~~lv~~ 84 (261)
.|+.+.+++-+.+++++.+ -.++|+|||. |..++-++|++. -..+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4678899999999888765 6799999998 888999999864 3355555554
No 231
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=75.27 E-value=5.3 Score=34.99 Aligned_cols=59 Identities=24% Similarity=0.222 Sum_probs=41.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.++.|+-+|=.=|==|++ |.+..++|+..+++... ..++.|+|.|.|+=|--..-...|
T Consensus 286 ~gvpVvGvdsLRYfW~~r------------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 286 QGVPVVGVDSLRYFWSER------------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CCCceeeeehhhhhhccC------------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 457788777655555543 56778888888887764 468999999999976544433333
No 232
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=75.03 E-value=7.6 Score=27.01 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhcCCCeEEEEcChh--HHHHHHHHhhCcccccceEE
Q 024900 40 ASQLNDFCKDVVKDQAFFICNSIG--GLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 40 a~dl~~~~~~l~~~~~~lvGhS~G--g~va~~~a~~~p~~v~~lv~ 83 (261)
...|..+++.+-..+++|||=|-- -.+-.++|..+|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 345677777777889999994422 23777788899999998864
No 233
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=74.68 E-value=2.9 Score=37.45 Aligned_cols=46 Identities=15% Similarity=0.090 Sum_probs=34.8
Q ss_pred HHHHHHHhcCC--CeEEEEcChhHHHHHHHHhh--CcccccceEEeecch
Q 024900 43 LNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM--EPEICRGMILLNISL 88 (261)
Q Consensus 43 l~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~~ 88 (261)
+.+.|+++|.+ .+.|+|+|-||+.++.+.+. .....+++|+.|+..
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 35668888875 69999999999977777663 244678888888764
No 234
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=70.45 E-value=23 Score=28.65 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhh
Q 024900 35 TFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+.++=++.+.+.+... ..++++++|+|.|+.|+...+.+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 4444455555555442 34689999999999999887765
No 235
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=70.43 E-value=7.3 Score=36.19 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=51.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~-~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
-.+.-....|.||=|.=......+.. .....+++++..-..-++++=- .++..+.|-|-||.++..++.++|++++.
T Consensus 497 d~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~a 576 (712)
T KOG2237|consen 497 DRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGA 576 (712)
T ss_pred ecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhh
Confidence 34455556688887655432211100 0123456666655555554321 24688999999999999999999999998
Q ss_pred eEEe
Q 024900 81 MILL 84 (261)
Q Consensus 81 lv~~ 84 (261)
+|+-
T Consensus 577 via~ 580 (712)
T KOG2237|consen 577 VIAK 580 (712)
T ss_pred hhhc
Confidence 8753
No 236
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=69.50 E-value=4.1 Score=34.67 Aligned_cols=29 Identities=21% Similarity=0.134 Sum_probs=22.1
Q ss_pred HHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 44 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
.++++..|+.+-.++|||+|=.-|+.+|-
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhcccccccceeeccchhhHHHHHHCC
Confidence 34567778899999999999777665543
No 237
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=69.46 E-value=6.1 Score=33.09 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=22.9
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
+++..+|+.+-.++|||+|-..|+.++.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 4456778889999999999988877764
No 238
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=68.46 E-value=6.7 Score=32.90 Aligned_cols=29 Identities=10% Similarity=0.008 Sum_probs=23.4
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+++...++++..++|||+|=..|+.++..
T Consensus 68 ~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 68 RALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 44566788899999999999888877653
No 239
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=67.94 E-value=16 Score=30.38 Aligned_cols=55 Identities=15% Similarity=0.038 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc-cccceEEeecchh
Q 024900 35 TFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLR 89 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~~~ 89 (261)
.+.+.++.+++.+.... -+-++++|.|=||.++-.++...++ .|..+|.++++..
T Consensus 72 pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 72 PLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred cHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 45555655555544322 2459999999999999999986543 5999999988654
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=67.58 E-value=11 Score=34.09 Aligned_cols=36 Identities=31% Similarity=0.368 Sum_probs=32.3
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+.....|.|-||.=++..|.+||+..++++.-.+..
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred CceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 458899999999999999999999999998877654
No 241
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=66.25 E-value=7.5 Score=32.37 Aligned_cols=29 Identities=24% Similarity=0.082 Sum_probs=22.7
Q ss_pred HHHHHhc-CCCeEEEEcChhHHHHHHHHhh
Q 024900 45 DFCKDVV-KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 45 ~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+++...+ +.+..++|||+|=..|+.+|..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3455566 8899999999999888877654
No 242
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=64.72 E-value=15 Score=37.11 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhC--cccccceEEeecchhh
Q 024900 35 TFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME--PEICRGMILLNISLRM 90 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv~~~~~~~~ 90 (261)
+++..|.--..-++++. ..++.++|.|+|+.++.++|... .+....++++|+++..
T Consensus 2163 Sies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2163 SIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred hHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 45655544433344444 35899999999999999999854 3446679999987654
No 243
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.20 E-value=10 Score=34.42 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=30.4
Q ss_pred HHhcCCCeEEEEcChhHHHHHHHHhh-----CcccccceEEeecchh
Q 024900 48 KDVVKDQAFFICNSIGGLVGLQAAVM-----EPEICRGMILLNISLR 89 (261)
Q Consensus 48 ~~l~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~~lv~~~~~~~ 89 (261)
..+|.+++.|||.|+|+.+.+.+... .-..|.-++++++|..
T Consensus 442 r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 442 RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 34566899999999999999865542 2335777888877643
No 244
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=62.87 E-value=11 Score=32.06 Aligned_cols=30 Identities=17% Similarity=0.085 Sum_probs=24.6
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+++.++..-.++|-|+|+.++..+|+.+
T Consensus 35 ~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 35 KALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 445556777778999999999999999875
No 245
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=60.46 E-value=29 Score=27.27 Aligned_cols=56 Identities=14% Similarity=0.251 Sum_probs=34.4
Q ss_pred CCCCC-CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 181 LPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 181 l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
+.+++ .||+.|.|+++.-... ..+. .++.+.+.+|| ||+.-.+ .+.+++.|.+-|+
T Consensus 134 i~~l~~~~v~CiyG~~E~d~~c---p~l~--~~~~~~i~lpG-gHHfd~d-y~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 IAKLPPAPVQCIYGEDEDDSLC---PSLR--QPGVEVIALPG-GHHFDGD-YDALAKRILDALK 190 (192)
T ss_pred HHhCCCCeEEEEEcCCCCCCcC---cccc--CCCcEEEEcCC-CcCCCCC-HHHHHHHHHHHHh
Confidence 45554 5999999998764221 1222 35678889988 6765544 5555555554443
No 246
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=59.27 E-value=6.5 Score=29.83 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=27.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHhc----CCCeEEEEcChhHH
Q 024900 14 LIGYGYSDKPNPRDFFDKPFYTFETWASQL----NDFCKDVV----KDQAFFICNSIGGL 65 (261)
Q Consensus 14 l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl----~~~~~~l~----~~~~~lvGhS~Gg~ 65 (261)
+-|||+......+ -..++...++.-| ..+.+.++ .++++|+|+|+++.
T Consensus 61 lVGHG~~~~~~~~----l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQT----LAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSE----ETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCce----eCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4599988321111 1457888888888 34444442 35799999999987
No 247
>PRK10279 hypothetical protein; Provisional
Probab=58.72 E-value=13 Score=31.43 Aligned_cols=32 Identities=28% Similarity=0.194 Sum_probs=25.9
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+.+++.++..-.++|-|+|+.++..+|....+
T Consensus 25 ~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 25 NALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 34555788888899999999999999986543
No 248
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=58.55 E-value=16 Score=27.85 Aligned_cols=29 Identities=14% Similarity=-0.012 Sum_probs=24.0
Q ss_pred HHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 46 FCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 46 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.+++.++..-.+.|-|.|+.++..++...
T Consensus 19 aL~e~gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 19 ALRERGPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 34445777888999999999999999865
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=57.91 E-value=27 Score=31.74 Aligned_cols=61 Identities=18% Similarity=0.316 Sum_probs=42.8
Q ss_pred CCCCEEEEecCCCCCCCchhhhh-hc----cCCC-------CccEEEcCCCCCCCCC--CChhhHHHHHHHHHHh
Q 024900 184 VKCPVLIAWGDKDPWEPIELGRA-YG----NFDS-------VEDFIVLPNVGHCPQD--EAPHLVNPLVESFVTR 244 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~~~~~~~-~~----~~~~-------~~~~~~i~~~gH~~~~--e~p~~~~~~l~~fl~~ 244 (261)
---..++.||..|..+|+..... |. .+.. -.|+..+||.+|+.-- ..+-.....|.+|.++
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 34678999999999998875432 22 2221 2488999999999543 3455667788889986
No 250
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=57.17 E-value=15 Score=31.05 Aligned_cols=30 Identities=13% Similarity=-0.015 Sum_probs=25.4
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+++.++..-.+.|-|+|+.++..+|..+
T Consensus 31 ~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 31 KALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 445567788899999999999999999964
No 251
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=56.53 E-value=30 Score=31.19 Aligned_cols=79 Identities=16% Similarity=0.106 Sum_probs=47.8
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+...++.+|.| |-|-|-.....+. ..+-+..|+|+.+++.+. ...++.|.|-|++|..+-.+|..
T Consensus 116 k~aNiLfLd~PvGvGFSYs~~~~~~----~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~ 191 (454)
T KOG1282|consen 116 KEANILFLDQPVGVGFSYSNTSSDY----KTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILK 191 (454)
T ss_pred ccccEEEEecCCcCCccccCCCCcC----cCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHh
Confidence 34568888887 7777753221110 123455566766665443 23579999999999866666552
Q ss_pred -C------cccccceEEeecc
Q 024900 74 -E------PEICRGMILLNIS 87 (261)
Q Consensus 74 -~------p~~v~~lv~~~~~ 87 (261)
. +--++|+++-++.
T Consensus 192 ~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 192 GNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred ccccccCCcccceEEEecCcc
Confidence 2 1246777766653
No 252
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.50 E-value=17 Score=28.23 Aligned_cols=28 Identities=11% Similarity=-0.062 Sum_probs=23.0
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++.+...-.++|-|.||.+|..+|+.+
T Consensus 21 L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 21 LEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 4445677788999999999999999854
No 253
>COG0218 Predicted GTPase [General function prediction only]
Probab=56.47 E-value=19 Score=28.49 Aligned_cols=15 Identities=47% Similarity=0.964 Sum_probs=12.7
Q ss_pred EEEecCCCCCCCCCC
Q 024900 9 VYSIDLIGYGYSDKP 23 (261)
Q Consensus 9 V~~~Dl~G~G~S~~~ 23 (261)
++..|+||||....|
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 677899999999754
No 254
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=55.58 E-value=14 Score=33.96 Aligned_cols=30 Identities=10% Similarity=0.003 Sum_probs=24.9
Q ss_pred HHH-HHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 45 DFC-KDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 45 ~~~-~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++ +..|+++-.++|||+|=+.|+..|-..
T Consensus 256 ~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 256 QLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 445 467899999999999999999888754
No 255
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=55.45 E-value=18 Score=30.18 Aligned_cols=30 Identities=20% Similarity=0.013 Sum_probs=24.1
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+++.++.--.++|-|+|+.++..+|..+
T Consensus 30 ~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 30 QALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 334556777777899999999999999864
No 256
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=54.96 E-value=13 Score=33.10 Aligned_cols=39 Identities=26% Similarity=0.564 Sum_probs=23.1
Q ss_pred CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCC
Q 024900 186 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
--|+++.|+.|+|........ ........+|++++|+.=
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~D 415 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSD 415 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeecc
Confidence 469999999999976553222 223345578999999943
No 257
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.50 E-value=22 Score=28.59 Aligned_cols=28 Identities=21% Similarity=0.046 Sum_probs=22.9
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++.++..-.++|-|.|+.+|..+|+.+
T Consensus 22 L~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 22 LLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3445677778999999999999999754
No 258
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=48.51 E-value=48 Score=30.84 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=50.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
|.++..-+.-.+||=|.=..-..+. .......-++++++-..+++++ ++ +++-+-|-|-||.+.-....++||..
T Consensus 447 LerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelf 525 (648)
T COG1505 447 LERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELF 525 (648)
T ss_pred HhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhh
Confidence 4556666677888877543111000 0011122345555544454442 44 46889999999999888888999999
Q ss_pred cceEEee
Q 024900 79 RGMILLN 85 (261)
Q Consensus 79 ~~lv~~~ 85 (261)
.++|+--
T Consensus 526 gA~v~ev 532 (648)
T COG1505 526 GAAVCEV 532 (648)
T ss_pred Cceeecc
Confidence 9887533
No 259
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=48.24 E-value=24 Score=30.20 Aligned_cols=77 Identities=18% Similarity=0.203 Sum_probs=49.7
Q ss_pred eEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-------CCCeEEEEcChhHHHHHHHHhhCccc--
Q 024900 8 RVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEPEI-- 77 (261)
Q Consensus 8 ~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~p~~-- 77 (261)
.++..|-| |-|.|-.-.. +....+....+.|+.++++.+- ..+++|+..|+||-++..+++..-+.
T Consensus 73 dllfvDnPVGaGfSyVdg~----~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGS----SAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred cEEEecCCCcCceeeecCc----ccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 34555544 7787743110 1112257788999999887762 34799999999999999998753332
Q ss_pred -------ccceEEeecch
Q 024900 78 -------CRGMILLNISL 88 (261)
Q Consensus 78 -------v~~lv~~~~~~ 88 (261)
..++++-|++.
T Consensus 149 ~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 149 RGEIKLNFIGVALGDSWI 166 (414)
T ss_pred cCceeecceeEEccCccc
Confidence 34555555543
No 260
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.72 E-value=30 Score=27.57 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=24.3
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+.+.+..--.++|-|.|+.+|..+|...+.
T Consensus 20 L~e~g~~~d~i~GtS~GAl~aa~~a~~~~~ 49 (215)
T cd07209 20 LAEAGIEPDIISGTSIGAINGALIAGGDPE 49 (215)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCcH
Confidence 444567667899999999999999997753
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=45.37 E-value=31 Score=26.35 Aligned_cols=29 Identities=24% Similarity=0.176 Sum_probs=23.0
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCc
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
+++.+...-.++|-|.|+.+|..++..++
T Consensus 22 L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 22 LEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34456666779999999999999998754
No 262
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.33 E-value=38 Score=30.02 Aligned_cols=57 Identities=14% Similarity=0.258 Sum_probs=36.8
Q ss_pred CCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC-----ChhhHHHHHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE-----APHLVNPLVESFVT 243 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~p~~~~~~l~~fl~ 243 (261)
.--+++|.|+.|+|..... .+..-..++.+.+.||+.|...+. +-++....|..|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3458999999999864321 222223457788889999996642 23445666676754
No 263
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=43.19 E-value=23 Score=31.60 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=26.3
Q ss_pred HhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 49 DVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 49 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
+.++.+-.+.|-|.|+.+|..+|...++.+..+
T Consensus 97 E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 97 EANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 346667789999999999999999767665544
No 264
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=42.72 E-value=19 Score=23.39 Aligned_cols=31 Identities=26% Similarity=0.475 Sum_probs=23.4
Q ss_pred CeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
++.++| ||.+++++|....+.=..+.++...
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEecc
Confidence 467888 8999999988766655677777754
No 265
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=41.77 E-value=26 Score=20.75 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEE-cChh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFIC-NSIG 63 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvG-hS~G 63 (261)
+....|..|+...|+.+-+.++.++| |..|
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipGsHns~ 36 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPGSHNSG 36 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEeccccccc
Confidence 45678899999999999999999998 5544
No 266
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=39.27 E-value=46 Score=27.41 Aligned_cols=31 Identities=13% Similarity=-0.076 Sum_probs=23.5
Q ss_pred HHHhcCC-CeEEEEcChhHHHHHHHHhhCccc
Q 024900 47 CKDVVKD-QAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 47 ~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+.+.++. --.++|-|.|+.+|..+++..+.+
T Consensus 20 l~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 20 FLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 3344555 457999999999999999976544
No 267
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=38.92 E-value=39 Score=19.19 Aligned_cols=18 Identities=11% Similarity=0.372 Sum_probs=12.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 024900 41 SQLNDFCKDVVKDQAFFI 58 (261)
Q Consensus 41 ~dl~~~~~~l~~~~~~lv 58 (261)
++|..+++.++.+++++|
T Consensus 21 ~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 21 EELLEFIEQLNPRKVILV 38 (43)
T ss_dssp HHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 467788888866555554
No 268
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=38.70 E-value=36 Score=26.01 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=35.8
Q ss_pred CCCCCCEEEEecCCCCCC-CchhhhhhccC-CCCccEEEcCCCCCCCC-CCChhhHHHHHHHH
Q 024900 182 PQVKCPVLIAWGDKDPWE-PIELGRAYGNF-DSVEDFIVLPNVGHCPQ-DEAPHLVNPLVESF 241 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~f 241 (261)
..+++|++++.|++|... +........+. ....+++.+++ +|+.+ .+++..+.+.+..|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 150 GPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVPG-DHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEccC-chHHHHHHhHHHHHHHHHhh
Confidence 357899999999998653 22211222222 23456777765 78765 45666677666654
No 269
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=38.52 E-value=22 Score=33.05 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=26.7
Q ss_pred eEEEEcChhHHHHHHHHhhC-cccccceEEeecch
Q 024900 55 AFFICNSIGGLVGLQAAVME-PEICRGMILLNISL 88 (261)
Q Consensus 55 ~~lvGhS~Gg~va~~~a~~~-p~~v~~lv~~~~~~ 88 (261)
++--+.|-||.-++..|.+. ...|++++..++..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 44556899999999999875 56799999887654
No 270
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=38.50 E-value=61 Score=27.62 Aligned_cols=19 Identities=21% Similarity=0.340 Sum_probs=16.1
Q ss_pred EEEEcChhHHHHHHHHhhC
Q 024900 56 FFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 56 ~lvGhS~Gg~va~~~a~~~ 74 (261)
.+.|-|.||.||..+|..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 3677999999999999754
No 271
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=38.26 E-value=32 Score=29.37 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=25.1
Q ss_pred HHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 48 KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 48 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.+.++.+-++.|-|.|+.+|..++...++.+..+
T Consensus 91 ~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~ 124 (323)
T cd07231 91 VEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSF 124 (323)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3346667789999999999999988655555444
No 272
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=37.68 E-value=44 Score=30.71 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=35.8
Q ss_pred CCCHHHHHHHH---HHHHHHhcC--CCeEEEEcChhHHHHHHHHhh--CcccccceEEeecc
Q 024900 33 FYTFETWASQL---NDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EPEICRGMILLNIS 87 (261)
Q Consensus 33 ~~~~~~~a~dl---~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~ 87 (261)
.+.+.+++.-+ .+-|...|+ +++.|+|||-||..+..++.- ...+..+.|.+++.
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 34555444333 334555665 479999999999999888763 23456667776654
No 273
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=37.65 E-value=54 Score=24.92 Aligned_cols=28 Identities=18% Similarity=0.057 Sum_probs=21.9
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++.+...-.++|-|.|+.+|..++...
T Consensus 22 L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 22 LEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3445566678999999999999999754
No 274
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=37.40 E-value=49 Score=30.07 Aligned_cols=58 Identities=19% Similarity=0.238 Sum_probs=35.9
Q ss_pred CCEEEEecCCCCCCCchhh----hhhc---cCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 186 CPVLIAWGDKDPWEPIELG----RAYG---NFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~~----~~~~---~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
.+++...|=.|..++.... +.+. ...+ -.+..+-++|||.+.++|+.....+..|+.-
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n-~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN-LTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCC-ceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 4555556656655554332 1111 1122 2344555789999999999999999988753
No 275
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.10 E-value=28 Score=30.90 Aligned_cols=34 Identities=18% Similarity=0.065 Sum_probs=27.2
Q ss_pred HhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 49 DVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 49 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.++.+-.++|-|.|+.+|..+|...++.+..++
T Consensus 91 e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 91 DADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred hCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3466677899999999999999997777766553
No 276
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=35.40 E-value=32 Score=30.34 Aligned_cols=36 Identities=11% Similarity=-0.056 Sum_probs=28.1
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.+.++.+-++.|-|.|+.||..+|...++.+..+.
T Consensus 105 L~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 105 LWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 344566777899999999999999996666666664
No 277
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.36 E-value=62 Score=26.20 Aligned_cols=29 Identities=14% Similarity=-0.088 Sum_probs=22.3
Q ss_pred HHHhcCC--CeEEEEcChhHHHHHHHHhhCc
Q 024900 47 CKDVVKD--QAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 47 ~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p 75 (261)
+.+.++. .-.++|-|.|+.++..+++..+
T Consensus 21 L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 21 LIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3345554 3479999999999999999754
No 278
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.40 E-value=45 Score=27.29 Aligned_cols=24 Identities=29% Similarity=0.278 Sum_probs=18.9
Q ss_pred eEEEEcChhHHHHHHHHhhCccccc
Q 024900 55 AFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 55 ~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
-.+.|-|.|+.+|..++. .|+++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChHHHH
Confidence 379999999999999994 454443
No 279
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=33.26 E-value=51 Score=29.88 Aligned_cols=37 Identities=16% Similarity=0.085 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhC-cc
Q 024900 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME-PE 76 (261)
Q Consensus 40 a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~-p~ 76 (261)
.+-|.+-++.||.. +.+|-|.|||..=|+-+++.. |+
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 33444556777764 699999999999999999974 54
No 280
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=31.92 E-value=66 Score=18.54 Aligned_cols=33 Identities=18% Similarity=0.040 Sum_probs=21.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~ 48 (261)
.++|.+..+|+||+--.. -|+++..+.+.+.+.
T Consensus 11 ~~~y~~~~pdlpg~~t~G------------~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQG------------DTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEEEE------------SSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhcC------------CCHHHHHHHHHHHHH
Confidence 357999999999885221 256666666655544
No 281
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=31.48 E-value=1.3e+02 Score=23.61 Aligned_cols=65 Identities=22% Similarity=0.215 Sum_probs=42.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc--ccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lv 82 (261)
+++.++.+|=+|....+ .+..+++.++++.....+++||--+..+.-.+..+..+- -.+.++|
T Consensus 82 ~~~D~vlIDT~Gr~~~d---------------~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lI 146 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPRD---------------EELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLI 146 (196)
T ss_dssp TTSSEEEEEE-SSSSTH---------------HHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEE
T ss_pred cCCCEEEEecCCcchhh---------------HHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEE
Confidence 45889999998876543 344566777777776667777776666666665555432 2478888
Q ss_pred Ee
Q 024900 83 LL 84 (261)
Q Consensus 83 ~~ 84 (261)
+.
T Consensus 147 lT 148 (196)
T PF00448_consen 147 LT 148 (196)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 282
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=31.21 E-value=52 Score=27.01 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=11.7
Q ss_pred CCCeEEEEcChhHH
Q 024900 52 KDQAFFICNSIGGL 65 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~ 65 (261)
...++++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 46799999999974
No 283
>PRK07877 hypothetical protein; Provisional
Probab=31.08 E-value=75 Score=30.59 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=30.5
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCcccc-cceEEeecc
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC-RGMILLNIS 87 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v-~~lv~~~~~ 87 (261)
-+.|...++.|+|.+.|+.++..+|.. .| ..|+++|..
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~Lara---GvvG~l~lvD~D 140 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAE---GLCGELRLADFD 140 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHc---cCCCeEEEEcCC
Confidence 345566789999999999999999874 44 889999864
No 284
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=30.79 E-value=2.1e+02 Score=23.35 Aligned_cols=70 Identities=14% Similarity=0.002 Sum_probs=40.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHH----HHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL----VGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~----va~~~a~~~p~~v~~ 80 (261)
.|.||+-.|.+-...+.... ...++.+ ++.+.++..|+++.+++.-|..+. +...++ .++++.+
T Consensus 5 ~H~H~~~~~~~~~~~~~~~~------~~~~~~e----~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~--~~~r~~g 72 (263)
T cd01311 5 AHMHVFDPGYPFPPAPEKFT------PYDPGID----DLRALRSTLGIDRVVIVQASIYGADNSNLLDALA--SNGKARG 72 (263)
T ss_pred eeeeeeCCCCCCCCCCCCCC------CCCCCHH----HHHHHHHHhCCCcEEEeCccccCCchHHHHHHHh--hCCCeEE
Confidence 45677666554443332111 1235644 455667778999999988654333 222222 4588888
Q ss_pred eEEeec
Q 024900 81 MILLNI 86 (261)
Q Consensus 81 lv~~~~ 86 (261)
++.+++
T Consensus 73 ~~~~~p 78 (263)
T cd01311 73 GATVDP 78 (263)
T ss_pred EEEECC
Confidence 888763
No 285
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=30.71 E-value=1.5e+02 Score=22.40 Aligned_cols=51 Identities=25% Similarity=0.325 Sum_probs=30.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHH
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQ 69 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~ 69 (261)
+.++-.|++.|.+|=-.|. +.+|+.+.. +...|.+=+++||-|.|=.=+..
T Consensus 64 i~~~~~vi~Ld~~Gk~~sS---------------e~fA~~l~~-~~~~G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 64 IPKGSYVVLLDIRGKALSS---------------EEFADFLER-LRDDGRDISFLIGGADGLSEAVK 114 (155)
T ss_pred cCCCCeEEEEecCCCcCCh---------------HHHHHHHHH-HHhcCCeEEEEEeCcccCCHHHH
Confidence 5667789999998854442 444544443 23344223677887777444433
No 286
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=30.29 E-value=78 Score=25.82 Aligned_cols=22 Identities=18% Similarity=0.033 Sum_probs=19.2
Q ss_pred EEEEcChhHHHHHHHHhhCc-cc
Q 024900 56 FFICNSIGGLVGLQAAVMEP-EI 77 (261)
Q Consensus 56 ~lvGhS~Gg~va~~~a~~~p-~~ 77 (261)
.++|-|.|+.+|..+|...+ +.
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~~~~ 56 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVSMEE 56 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCCHHH
Confidence 89999999999999999764 44
No 287
>PRK04940 hypothetical protein; Provisional
Probab=29.33 E-value=2.1e+02 Score=22.31 Aligned_cols=51 Identities=10% Similarity=-0.045 Sum_probs=32.7
Q ss_pred EEEEecCCCCCCCchhhh-hhccCCCCc-cEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 188 VLIAWGDKDPWEPIELGR-AYGNFDSVE-DFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 188 vlii~G~~D~~~~~~~~~-~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
.+++..+.|.+.....+. .+. ++ +..+.+|+.|- . +.=++....|.+|+++
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~-f-~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHK-F-KNISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCC-C-CCHHHHHHHHHHHHhc
Confidence 589999999988776442 333 34 56677776665 2 3334466677778753
No 288
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=28.94 E-value=88 Score=25.59 Aligned_cols=21 Identities=19% Similarity=0.033 Sum_probs=18.1
Q ss_pred eEEEEcChhHHHHHHHHhhCc
Q 024900 55 AFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 55 ~~lvGhS~Gg~va~~~a~~~p 75 (261)
-.+.|-|.|+.+|..+|+..+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 349999999999999998754
No 289
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=28.83 E-value=1.2e+02 Score=23.26 Aligned_cols=51 Identities=20% Similarity=0.117 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEE-cChhHHHHHHHHhhC-cccccceEEe
Q 024900 33 FYTFETWASQLNDFCKDVVKDQAFFIC-NSIGGLVGLQAAVME-PEICRGMILL 84 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~~~~~~lvG-hS~Gg~va~~~a~~~-p~~v~~lv~~ 84 (261)
.|+.+.+++-|.+++++.+ -..+|+| .+.|+.++-++|.+. -..+..++-+
T Consensus 73 ~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~l 125 (181)
T cd01985 73 GYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALLGVPQISDVTKL 125 (181)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHhCCCcceeEEEE
Confidence 4677888888888887754 5677787 455667888888763 2344444444
No 290
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=28.80 E-value=73 Score=28.78 Aligned_cols=44 Identities=11% Similarity=0.258 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 41 SQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 41 ~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+|...++..++. ..++.+| ||.+++++|+..-..-..++++...
T Consensus 201 eda~~l~~~~~~~~~vV~vG---~G~ig~Evaa~l~~~~~~VT~V~~e 245 (478)
T KOG1336|consen 201 EDANRLVAAIQLGGKVVCVG---GGFIGMEVAAALVSKAKSVTVVFPE 245 (478)
T ss_pred HHHHHHHHHhccCceEEEEC---chHHHHHHHHHHHhcCceEEEEccC
Confidence 344555555543 3355555 9999999999877777777777653
No 291
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=28.68 E-value=1.8e+02 Score=19.21 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhC
Q 024900 38 TWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 38 ~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..+++..+.++.. +.+++-++|-|-|=.+|.+.++.+
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3344444444442 336799999999999998888865
No 292
>PF15660 Imm49: Immunity protein 49
Probab=28.58 E-value=47 Score=20.76 Aligned_cols=21 Identities=19% Similarity=0.667 Sum_probs=17.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcC
Q 024900 32 PFYTFETWASQLNDFCKDVVK 52 (261)
Q Consensus 32 ~~~~~~~~a~dl~~~~~~l~~ 52 (261)
..|.+.+|.+|+.++++.+.-
T Consensus 62 rlyrlrdwtddladwvdrlrr 82 (84)
T PF15660_consen 62 RLYRLRDWTDDLADWVDRLRR 82 (84)
T ss_pred hhhhhhhhhhHHHHHHHHHhh
Confidence 468999999999999988754
No 293
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=28.10 E-value=1.1e+02 Score=24.08 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=31.5
Q ss_pred HHHHHhcCCCeEEEE-cChhHHHHHHHHhhCcccccceEEeecc
Q 024900 45 DFCKDVVKDQAFFIC-NSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 45 ~~~~~l~~~~~~lvG-hS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+..++|...++.++| -.+|+.++..+|.. .|..++++|..
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 345566678899999 66888899999875 48889999864
No 294
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=27.90 E-value=3.6e+02 Score=22.48 Aligned_cols=64 Identities=13% Similarity=0.057 Sum_probs=41.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEE-cChhHHHHHHHHhhC-cccccceEE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NSIGGLVGLQAAVME-PEICRGMIL 83 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvG-hS~Gg~va~~~a~~~-p~~v~~lv~ 83 (261)
++.++.+|-+|....+. ...+++.+++.......++||- -++++.-+...+..+ +-.+.++|+
T Consensus 154 ~~D~ViIDt~Gr~~~~~---------------~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYRAS---------------ETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcCCH---------------HHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 68999999999865431 2233444555444344566655 467887777777764 456788876
Q ss_pred e
Q 024900 84 L 84 (261)
Q Consensus 84 ~ 84 (261)
.
T Consensus 219 T 219 (270)
T PRK06731 219 T 219 (270)
T ss_pred E
Confidence 5
No 295
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=26.58 E-value=87 Score=26.54 Aligned_cols=29 Identities=14% Similarity=-0.044 Sum_probs=22.3
Q ss_pred hcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 50 VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 50 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++.+-.+.|-|.|+.+|..++....+.+
T Consensus 94 ~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 94 QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 45667789999999999999998654333
No 296
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=26.42 E-value=45 Score=20.48 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=18.3
Q ss_pred CCCCCCChhhHHHHHHHHHHhcCCC
Q 024900 224 HCPQDEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~~~~ 248 (261)
.+|.+++-..|..+|..||-++...
T Consensus 20 ~hP~WDQ~Rl~~aALa~FL~QnG~~ 44 (57)
T PF10929_consen 20 THPNWDQYRLFQAALAGFLLQNGCQ 44 (57)
T ss_pred cCCCchHHHHHHHHHHHHHHHcCch
Confidence 4577788888888888888765543
No 297
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=25.60 E-value=1e+02 Score=26.53 Aligned_cols=45 Identities=13% Similarity=0.210 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCCeEEEEcChhHH---HHHHHHhhCcccccceEEeecc
Q 024900 42 QLNDFCKDVVKDQAFFICNSIGGL---VGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 42 dl~~~~~~l~~~~~~lvGhS~Gg~---va~~~a~~~p~~v~~lv~~~~~ 87 (261)
.+..++..+...+++|||-| |=. |=.+++.++|.+|.++.+=+..
T Consensus 267 ~l~nil~~~p~~kfvLVGDs-GE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDS-GEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHhCCCceEEEecCC-CCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 34556777888899999943 543 6677788899999999876654
No 298
>PRK12467 peptide synthase; Provisional
Probab=25.39 E-value=2.1e+02 Score=33.68 Aligned_cols=75 Identities=17% Similarity=0.041 Sum_probs=47.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhh---Ccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVM---EPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~---~p~~v 78 (261)
|..+..|+.+..++.-.-..+ ..++..++..-.+.+.... ..+..+.|+|+||.++.+++.. .-+.+
T Consensus 3715 l~~~~~~~~l~~~~~~~d~~~---------~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~ 3785 (3956)
T PRK12467 3715 LEGDRHVLGLTCRHLLDDGWQ---------DTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESE 3785 (3956)
T ss_pred hCCCCcEEEEeccccccccCC---------ccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCce
Confidence 344567777777665433321 1255655555555554443 4579999999999999999874 33456
Q ss_pred cceEEeec
Q 024900 79 RGMILLNI 86 (261)
Q Consensus 79 ~~lv~~~~ 86 (261)
.-+.+++.
T Consensus 3786 ~~~~~~~~ 3793 (3956)
T PRK12467 3786 AFLGLFDN 3793 (3956)
T ss_pred eEEEEEec
Confidence 66666653
No 299
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=25.36 E-value=1.8e+02 Score=19.45 Aligned_cols=36 Identities=6% Similarity=-0.010 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+...|.+.+. ++||.+.+.+.|-+-...+|.-+...
T Consensus 28 ~~~~~~~~l~---~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 28 GPAAWVDGLR---QALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred CHHHHHHHHH---HHhCCceeEEEccCCccHHHHHHHHh
Confidence 4556666554 47889999999999999999888653
No 300
>PRK14974 cell division protein FtsY; Provisional
Probab=25.27 E-value=2.9e+02 Score=23.91 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=42.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc--ccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lv 82 (261)
.++.|+.+|-.|...++ ..+.+++..+.+.......++|.-+.-|.=+.+-+..+. -.+.++|
T Consensus 221 ~~~DvVLIDTaGr~~~~---------------~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giI 285 (336)
T PRK14974 221 RGIDVVLIDTAGRMHTD---------------ANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVI 285 (336)
T ss_pred CCCCEEEEECCCccCCc---------------HHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEE
Confidence 46788999988776653 233445566665555666778887777766666555442 3577777
Q ss_pred Ee
Q 024900 83 LL 84 (261)
Q Consensus 83 ~~ 84 (261)
+.
T Consensus 286 lT 287 (336)
T PRK14974 286 LT 287 (336)
T ss_pred Ee
Confidence 65
No 301
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=25.11 E-value=37 Score=29.17 Aligned_cols=68 Identities=18% Similarity=0.092 Sum_probs=40.7
Q ss_pred ecCCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 12 IDLIGYGYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 12 ~Dl~G~G~S~~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
+.+||++..+..++..|. ....|+..+|.+-+..+++..++.+.. |.|=.|-=|..+.+..|.+++++
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W~i~~~~--gL~~eg~~Ard~l~~l~~r~~r~ 305 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRWKIESRT--GLSGEGEKARDYLCALPARLRRF 305 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHTTGGG----S--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCccc--CCChHHHHHHHHHHhhHHHHHHH
Confidence 678888766532211110 224689999998666788888887776 88889999999888888887776
No 302
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=24.91 E-value=83 Score=27.54 Aligned_cols=69 Identities=16% Similarity=0.045 Sum_probs=48.9
Q ss_pred ecCCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 12 IDLIGYGYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 12 ~Dl~G~G~S~~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.+||++..+..++..|. ....||..+|++-+..+++.-++.+. -|.|-=|--|..+.+..|.++++|-
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W~v~~l--~gLs~eg~kArd~l~~l~~rirr~~ 363 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEEL--TGLSGEGRRAQDYVCGLPPRIRRLE 363 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCcCcc--cCCCHHHHHHHHHHHHhHHHHHHHH
Confidence 678899887633322111 23579999999655666766655554 5888889999999999988888773
No 303
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=24.90 E-value=1.4e+02 Score=22.50 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEc-ChhHHHHHHHHhhC-cccccceEEe
Q 024900 33 FYTFETWASQLNDFCKDVVKDQAFFICN-SIGGLVGLQAAVME-PEICRGMILL 84 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~~~~~~lvGh-S~Gg~va~~~a~~~-p~~v~~lv~~ 84 (261)
.|+.+.+++-+.+++++.+ -..+|+|+ +.|.-++-++|.+. -..+..++-+
T Consensus 65 ~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv~~l 117 (168)
T cd01715 65 HYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKLDVGLISDVTAL 117 (168)
T ss_pred ccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHhCCCceeeEEEE
Confidence 4677888888888887754 46777774 45667888888764 2234444433
No 304
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.09 E-value=91 Score=26.59 Aligned_cols=21 Identities=29% Similarity=0.310 Sum_probs=18.0
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q 024900 52 KDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~ 72 (261)
..+..+.|||+|=+-|+..+.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 667899999999988887775
No 305
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.02 E-value=1.2e+02 Score=24.87 Aligned_cols=27 Identities=19% Similarity=0.127 Sum_probs=20.8
Q ss_pred CeEEEEcChhHHHHHHHHhhCc-ccccc
Q 024900 54 QAFFICNSIGGLVGLQAAVMEP-EICRG 80 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p-~~v~~ 80 (261)
--.++|-|.|+.++..+++..+ +.+..
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~~~~~~~ 60 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLPLDQILQ 60 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCCHHHHHH
Confidence 3469999999999999998664 44333
No 306
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=23.84 E-value=1e+02 Score=26.09 Aligned_cols=16 Identities=13% Similarity=0.231 Sum_probs=14.6
Q ss_pred EEEcChhHHHHHHHHh
Q 024900 57 FICNSIGGLVGLQAAV 72 (261)
Q Consensus 57 lvGhS~Gg~va~~~a~ 72 (261)
+.|-|.||.||..++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 7789999999999986
No 307
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.50 E-value=1.2e+02 Score=24.96 Aligned_cols=22 Identities=14% Similarity=-0.061 Sum_probs=18.7
Q ss_pred CeEEEEcChhHHHHHHHHhhCc
Q 024900 54 QAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.-.++|-|.|+.++..+++..+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3558999999999999998764
No 308
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=23.43 E-value=1.2e+02 Score=25.11 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=32.4
Q ss_pred CCCCCEEEEecCCCC---------CCCchh--hhhhccCCCCccEEEcCCCCCCCCCCCh
Q 024900 183 QVKCPVLIAWGDKDP---------WEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 183 ~i~~Pvlii~G~~D~---------~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
..++|+++|-...+. ..|... .+.+.+..+.+-.....+.||+=+++..
T Consensus 152 ~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 152 DFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 356999999877774 344433 2345555443555677999999777666
No 309
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=23.40 E-value=2.8e+02 Score=23.08 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHH-HHhc-CCCeEEEEcChhHHHHHHHHhh
Q 024900 34 YTFETWASQLNDFC-KDVV-KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 34 ~~~~~~a~dl~~~~-~~l~-~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+.+++.+.+...++ +... ..++.++|.|-|+..|-.+|..
T Consensus 71 ~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 71 WGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 34555555544433 4433 3578999999999999999964
No 310
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=22.62 E-value=78 Score=25.48 Aligned_cols=21 Identities=14% Similarity=0.140 Sum_probs=17.4
Q ss_pred CCEEEEecCCCCCCCchhhhh
Q 024900 186 CPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~~~~ 206 (261)
.|++++||+.|..+.+...+.
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~ 190 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQ 190 (220)
T ss_pred CCEEEEecCCCCccCcchHHH
Confidence 599999999999888875443
No 311
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.01 E-value=1.5e+02 Score=22.09 Aligned_cols=24 Identities=13% Similarity=-0.011 Sum_probs=18.7
Q ss_pred HHhcC--CCeEEEEcChhHHHHHHHH
Q 024900 48 KDVVK--DQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 48 ~~l~~--~~~~lvGhS~Gg~va~~~a 71 (261)
.+.+. .--.+.|.|.|+.++..++
T Consensus 21 ~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 21 AERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 33444 4467889999999999999
No 312
>PF15566 Imm18: Immunity protein 18
Probab=21.71 E-value=1.2e+02 Score=18.32 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcChhHH
Q 024900 36 FETWASQLNDFCKDVVKDQAFFICNSIGGL 65 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~ 65 (261)
+..++++|..+......+-.++.--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 556677777777666566799999999985
No 313
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.69 E-value=93 Score=26.74 Aligned_cols=17 Identities=24% Similarity=0.083 Sum_probs=14.3
Q ss_pred EEEEcChhHHHHHHHHh
Q 024900 56 FFICNSIGGLVGLQAAV 72 (261)
Q Consensus 56 ~lvGhS~Gg~va~~~a~ 72 (261)
.++|||+|=..|+.+|-
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 57999999988888774
No 314
>PF03283 PAE: Pectinacetylesterase
Probab=20.45 E-value=1.8e+02 Score=25.46 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=24.5
Q ss_pred CCCeEEEEcChhHHHHHHH----HhhCcccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQA----AVMEPEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~----a~~~p~~v~~lv~~~~~~ 88 (261)
.++++|.|.|-||.=++.. +...|..++-..+.|+..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 3689999999999855543 334676555555556543
No 315
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=20.43 E-value=1.5e+02 Score=26.37 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 42 QLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 42 dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.+.+.+.....+++.++| ||.+++++|...-..=..+.++..
T Consensus 138 ~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 138 AIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 344444444457899999 899999998865444446777764
Done!