BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024902
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana
GN=FLA7 PE=1 SV=1
Length = 254
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/262 (62%), Positives = 201/262 (76%), Gaps = 10/262 (3%)
Query: 1 MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAP-EHVNLTDLLSVAGPFH 59
M KM++S+ + + AL++ SA+A+ A+ P P E+VNLT+LLSVAGPFH
Sbjct: 1 MAKMQLSIFIAVVALIV--CSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFH 58
Query: 60 TFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHA 119
TFL+YL ST V+ETFQNQANNT+EGITIFVPKDDAFK+ K P L+NLT+DQLKQL LFHA
Sbjct: 59 TFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHA 118
Query: 120 LPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVA 179
LPHYYS ++FKNLSQ PVST+AGG Y L FTDVSG V IDS W+RTKVSSSV STDPVA
Sbjct: 119 LPHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVA 178
Query: 180 LYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSSHRN 239
+YQV++VLLPEAIFGTD+PPMPAPAPAP V+ P+D+PS GA+SPK SSH+N
Sbjct: 179 VYQVNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADSEGASSPK------SSHKN 232
Query: 240 INWG-ICSQLILAVSGLMVLFL 260
+ + + + +SGL+ LFL
Sbjct: 233 SGQKLLLAPISMVISGLVALFL 254
>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana
GN=FLA6 PE=2 SV=2
Length = 247
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 115/210 (54%), Gaps = 18/210 (8%)
Query: 4 MEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEH--VNLTDLLSVAGPFHTF 61
M S+ + L+ LF+ Q S PT APAP E +NLT +L F T
Sbjct: 1 MSSSLFSYVVLLIFLFTIPYIQ---SQPT-----APAPTTEKSPINLTAILEAGHQFTTL 52
Query: 62 LNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALP 121
+ L +T+V Q N++D+G+TIF P D+AF LK +L +LT Q QL L+H +P
Sbjct: 53 IQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIP 112
Query: 122 HYYSFADFKNLSQMSPVSTYA----GGDYKLNFTD--VSGAVHIDSGWSRTKVSSSVHST 175
YYS +D L +PV T A GG + LNFT S V++ +G T++++++
Sbjct: 113 KYYSLSDL--LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQ 170
Query: 176 DPVALYQVDKVLLPEAIFGTDIPPMPAPAP 205
P+A+Y VD VLLPE +FGT P APAP
Sbjct: 171 FPLAVYVVDSVLLPEELFGTKTTPTGAPAP 200
>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana
GN=FLA9 PE=1 SV=1
Length = 247
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
+NLT +L G F TF++ L T+V Q N++ EG+T+F P D+AF++LK +L
Sbjct: 38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97
Query: 106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGD----YKLNFTDVSGAVHIDS 161
L+ D +L L+H P YYS D LS +PV T A G Y LNFT + +++ +
Sbjct: 98 LSPDDQVKLILYHVSPKYYSMDDL--LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVST 155
Query: 162 GWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSD 221
G+ T++S+S+ P+A+Y VD VLLP +FG APAP D
Sbjct: 156 GYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK 215
Query: 222 GGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL 260
AASP G+ + +G+ GL+VL L
Sbjct: 216 --AASPSDKSGSGEKKVGLGFGL---------GLIVLCL 243
>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana
GN=FLA11 PE=2 SV=2
Length = 246
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 8/179 (4%)
Query: 38 APAPAPEH-VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTD-EGITIFVPKDDAF 95
APAP P N+T +L AG F F+ L+ST+ + Q N++ G+T+F P D+AF
Sbjct: 26 APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAF 85
Query: 96 KSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFT 151
SLK +L +L+ Q QL FH LP + F+ +S +P+ T AG G + LN T
Sbjct: 86 NSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNIT 143
Query: 152 DVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVA 210
V+I +G V++SV+S +A+YQVD+VLLP A+FG+ + P PAP V+
Sbjct: 144 SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVS 202
>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana
GN=FLA13 PE=1 SV=1
Length = 247
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
+N+T +L G F T + L +T++ Q N++ EG+T+ P D+AF++LK +L
Sbjct: 35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94
Query: 106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYA-----GGDYKLNFTDVSGAVHID 160
L+ D +L L+H P +Y+ D LS +PV T A GG Y LNFT V++
Sbjct: 95 LSPDDQVKLILYHVSPKFYTLEDL--LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVS 152
Query: 161 SGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG-TDIPPM--PAPAPAPDVAPPADAPS 217
+G T++S+S+ P+A+Y VD VLLPE +FG I PM P + +PDV+ +++
Sbjct: 153 TGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSK 212
Query: 218 EVSDGGAASPKSSPGTNSSHRN 239
+ AA+P S + S N
Sbjct: 213 K-----AAAPSESEKSGSGEMN 229
>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana
GN=FLA12 PE=2 SV=2
Length = 249
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 47 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
N+T +L AG F F+ L+ST V Q NN+D GITIF P D +F LK +L +L
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98
Query: 107 TQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFTDVSGAVHIDSG 162
T +Q +L FH +P Y S ++F+ +S +P+ T AG G + LN T V+I SG
Sbjct: 99 TDEQQVELIQFHVIPSYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156
Query: 163 WSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
+ T VS +V+S +A+YQVDKVLLP+ +F
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana
GN=FLA10 PE=1 SV=1
Length = 422
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 38 APAPAPEHV-NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFK 96
APAP+ V N+T LL AG TF N L S+ V++TF++ ++G+T+F P D+AFK
Sbjct: 180 APAPSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTV---EKGLTVFAPSDEAFK 235
Query: 97 SLKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSG 155
+ P L NLTQ ++ L +HAL Y K N +S ++T G Y L +
Sbjct: 236 ARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGD 295
Query: 156 AVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAP-PAD 214
V + +G ++++ +V PV ++ VD VLLP +FG P PAP P P PA
Sbjct: 296 EVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKSSSPAPAPEPVSAPTPTPAK 355
Query: 215 APSEV 219
+PS V
Sbjct: 356 SPSPV 360
>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana
GN=FLA8 PE=1 SV=1
Length = 420
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 38 APAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKS 97
APAP+ N+T LL AG TF N L S+ VL+T+++ ++G+T+F P D+AFK+
Sbjct: 180 APAPSASLSNITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAFKA 235
Query: 98 LKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSGA 156
P L LTQ ++ L +HAL Y K N + +S ++T G + L +
Sbjct: 236 EGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDE 295
Query: 157 VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG 194
V + +G + ++++ +V PV ++ VD VLLP +FG
Sbjct: 296 VILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFG 333
>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana
GN=FLA4 PE=1 SV=1
Length = 420
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 24 AQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDE 83
A + +PP S + +P PA +NLT +L F+ L+ L ++ V+ F+N +
Sbjct: 186 ASETLTPPPTSTSLSPPPA--GINLTQILINGHNFNVALSLLVASGVITEFEN--DERGA 241
Query: 84 GITIFVPKDDAFKSL-KKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPV---- 138
GIT+FVP D AF L +L +L +Q + FH L YY+ ++++ PV
Sbjct: 242 GITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITN--PVQPTL 299
Query: 139 --STYAGGDYKLNFTDVSGA-VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
G Y LN + V+G+ V I+SG V+ + +PV+++ V KVLLP+ +F
Sbjct: 300 ATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357
>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana
GN=FLA2 PE=1 SV=1
Length = 403
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 38 APAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKS 97
AP +P + LT +L G F + L+ST +TFQ+ D G+T+F P D A
Sbjct: 181 APTASPSDLILTTILEKQGC-KAFSDILKSTGADKTFQD---TVDGGLTVFCPSDSAVGK 236
Query: 98 LKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGA 156
P +L+ L L+H +P Y S + S V+T A G+ K +FT +
Sbjct: 237 FM-PKFKSLSPANKTALVLYHGMPVYQSLQMLR--SGNGAVNTLATEGNNKFDFTVQNDG 293
Query: 157 --VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG-------------TDIPPMP 201
V +++ KV ++ +P+ +Y++DKVLLP I+
Sbjct: 294 EDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSSKKKPKNAE 353
Query: 202 APAPAPDVAPPADAPSEVSD--GGAASPKSSPGTN 234
A A P P+D EV+D GA S + +N
Sbjct: 354 ADADGPSADAPSDDDVEVADDKNGAVSAMITRTSN 388
>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana
GN=FLA1 PE=1 SV=1
Length = 424
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 45 HVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLA 104
+NLT ++S G L + +T+Q + + G+T+F P DDA K P
Sbjct: 184 EMNLTGIMSAHGCKVFAETLLTNPGASKTYQE---SLEGGMTVFCPGDDAMKGFL-PKYK 239
Query: 105 NLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGW 163
NLT + + F A+P YYS A K N M+ ++T ++L + V + +
Sbjct: 240 NLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRI 299
Query: 164 SRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
+ K+ ++ P+A+Y DKVLLP+ +F
Sbjct: 300 NTVKIVDTLIDEQPLAIYATDKVLLPKELF 329
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 51 LLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL---- 106
++ VA TF + + K + + A + + T+F P +DAF +L ++ +L
Sbjct: 48 IVEVAAGNETFSTLVAAVKAADLVE--ALSAEGPFTVFAPTNDAFAALPAGTVESLLLPE 105
Query: 107 TQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRT 166
+D+L ++ +H +P + A Q V++ AG L F G V ++ T
Sbjct: 106 NKDKLVKILTYHVVPGKITAAQV----QSGEVASLAG--EALTFKVKDGKVKVNKA---T 156
Query: 167 KVSSSVHSTDPVALYQVDKVLLP 189
+S+ V +++ V ++ +D+V+LP
Sbjct: 157 VISADVDASNGV-IHVIDQVILP 178
>sp|O33752|Y175_SYNP2 Uncharacterized protein SYNPCC7002_A0175 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A0175 PE=4 SV=1
Length = 133
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 58 FHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQD--QLKQLC 115
F T + +++ ++ET + + T+F P DDAF L ++ L Q+ QL ++
Sbjct: 14 FSTLVAAVQAAGLVETLAGEGD-----FTVFAPNDDAFAKLPPGTIQTLVQNPPQLARIL 68
Query: 116 LFHALPHYYSFADFKNLSQM-----SPVSTYAGGDYKL-NFTDVSGAVHIDSGWSRTKVS 169
+H + D L ++ SP+ D+++ N T ++ + D+G
Sbjct: 69 TYHVAAGRLTKDDLIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADNGI------ 122
Query: 170 SSVHSTDPVAL 180
+H D V L
Sbjct: 123 --IHVIDNVIL 131
>sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2
Length = 836
Score = 36.6 bits (83), Expect = 0.17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 43 PEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPS 102
P +L + L F TFL+ LE+ + E + T+FVP +DAFK +
Sbjct: 494 PAEKSLHEKLKQDKRFSTFLSLLEAADLKELLTQPGD-----WTLFVPTNDAFKGMTSEE 548
Query: 103 LANLTQDQ--LKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHID 160
L +D+ L+ + L+H P + F+ + + T G K+ +V+ + ++
Sbjct: 549 KEILIRDKNALQNIILYHLTPGVFIGKGFEP-GVTNILKTTQGS--KIFLKEVNDTLLVN 605
Query: 161 SGWSRTKVSSSVHSTDPVALYQVDKVLLP 189
S+ S + +T+ V ++ VDK+L P
Sbjct: 606 ELKSK---ESDIMTTNGV-IHVVDKLLYP 630
>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3
Length = 2570
Score = 34.7 bits (78), Expect = 0.76, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 82 DEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQ---MSPV 138
D TIFVP D ++NL+QD+L ++ L Y + L +
Sbjct: 1611 DGPFTIFVPHADL--------MSNLSQDELARIRAHRQLVFRYHVVGCRRLRSEDLLEQG 1662
Query: 139 STYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIP 198
A + L F++ G+++++ +V SS H L+ +D+VLLP +
Sbjct: 1663 YATALSGHPLRFSEREGSIYLND---FARVVSSDHEAVNGILHFIDRVLLPPEALHWE-- 1717
Query: 199 PMPAPAPAPDVAPPA 213
P AP P +V A
Sbjct: 1718 PDDAPIPRRNVTAAA 1732
>sp|P73392|Y1735_SYNY3 Uncharacterized protein sll1735 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1735 PE=4 SV=1
Length = 133
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 86 TIFVPKDDAFKSLKKPSLANLTQD--QLKQLCLFHALPHYYSFADFKNLSQMSPVS 139
T+F P D AF L ++ L Q+ QL ++ +H + ++ AD LS + V
Sbjct: 37 TVFAPTDTAFAKLPPGTITTLVQNIPQLARILTYHVVAGKFTQADLCRLSTVDSVE 92
>sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2
Length = 737
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 195 TDIPPMPAPAPAPDVAPPAD--APSEVSDGGAASPKS 229
T+ P +P PAPD AP A+ APS V +G AA P S
Sbjct: 671 TEAPTEASPEPAPDPAPVAEEAAPSAVEEGAAADPGS 707
>sp|Q9LS03|AOC1_ARATH Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana
GN=AOC1 PE=1 SV=1
Length = 254
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 117 FHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSG-WSRTKVSSSVHST 175
F A +Y F D+ +LS P TY +F ++G I G + + K+ V+ T
Sbjct: 151 FEATYSFY-FGDYGHLSVQGPYLTYED-----SFLAITGGAGIFEGAYGQVKLQQLVYPT 204
Query: 176 DPVALYQVDKVL--LPEAIFGTDIPPMPAPAPAPD 208
+ + + LP + GT +PP PAP+
Sbjct: 205 KLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPE 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,638,141
Number of Sequences: 539616
Number of extensions: 4509107
Number of successful extensions: 37725
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 35425
Number of HSP's gapped (non-prelim): 2163
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)