Query 024905
Match_columns 260
No_of_seqs 199 out of 1555
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:28:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024905.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024905hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 3.7E-43 1.3E-47 320.2 21.1 232 25-256 13-246 (418)
2 3io1_A Aminobenzoyl-glutamate 100.0 3E-42 1E-46 316.6 20.9 225 26-252 2-274 (445)
3 1ysj_A Protein YXEP; M20 famil 100.0 1E-40 3.4E-45 302.8 23.8 223 35-257 29-253 (404)
4 3pfo_A Putative acetylornithin 100.0 1.4E-38 4.8E-43 290.8 23.9 215 22-247 10-255 (433)
5 3ram_A HMRA protein; two-domai 100.0 8.6E-37 2.9E-41 276.2 19.5 202 25-247 3-211 (394)
6 3ct9_A Acetylornithine deacety 100.0 8.7E-36 3E-40 266.1 21.4 202 33-251 6-218 (356)
7 1cg2_A Carboxypeptidase G2; me 100.0 5.3E-36 1.8E-40 270.7 20.0 215 25-246 6-234 (393)
8 1vgy_A Succinyl-diaminopimelat 100.0 1.8E-35 6.3E-40 267.2 21.3 205 38-246 6-223 (393)
9 3isz_A Succinyl-diaminopimelat 100.0 2.8E-35 9.4E-40 263.8 21.8 206 37-246 2-220 (377)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 1.2E-34 4.1E-39 268.7 23.8 220 22-247 9-264 (485)
11 2pok_A Peptidase, M20/M25/M40 100.0 2.5E-34 8.4E-39 266.3 22.7 218 24-244 29-266 (481)
12 3pfe_A Succinyl-diaminopimelat 100.0 2.5E-34 8.5E-39 265.7 20.2 214 26-245 5-250 (472)
13 3tx8_A Succinyl-diaminopimelat 100.0 2.2E-34 7.6E-39 257.8 16.7 200 37-248 12-219 (369)
14 3khx_A Putative dipeptidase sa 100.0 5.7E-34 1.9E-38 264.6 20.0 213 23-242 19-314 (492)
15 2zog_A Cytosolic non-specific 100.0 9.4E-34 3.2E-38 262.0 21.1 216 26-247 8-257 (479)
16 3rza_A Tripeptidase; phosphory 100.0 3.5E-34 1.2E-38 259.1 17.2 206 27-243 13-237 (396)
17 3ife_A Peptidase T; metallopep 100.0 2E-33 6.9E-38 257.0 20.2 197 36-244 25-275 (434)
18 2rb7_A Peptidase, M20/M25/M40 100.0 6.7E-34 2.3E-38 254.6 16.5 194 37-245 5-215 (364)
19 2f7v_A Aectylcitrulline deacet 100.0 1.4E-33 4.7E-38 253.0 17.9 194 33-248 4-213 (369)
20 3gb0_A Peptidase T; NP_980509. 100.0 2.2E-33 7.7E-38 251.7 18.4 195 37-243 5-217 (373)
21 1fno_A Peptidase T; metallo pe 100.0 1.3E-32 4.6E-37 250.2 18.4 196 39-247 3-251 (417)
22 1lfw_A PEPV; hydrolase, dipept 100.0 1.6E-30 5.6E-35 239.8 23.5 209 29-242 5-291 (470)
23 3mru_A Aminoacyl-histidine dip 100.0 9.7E-31 3.3E-35 242.7 19.8 197 37-243 13-244 (490)
24 2qyv_A XAA-His dipeptidase; YP 100.0 3.1E-29 1.1E-33 232.4 21.7 197 37-244 10-241 (487)
25 1z2l_A Allantoate amidohydrola 100.0 5.6E-29 1.9E-33 226.6 20.3 202 31-251 2-260 (423)
26 1q7l_A Aminoacylase-1; catalys 100.0 1.3E-28 4.4E-33 202.5 13.7 171 37-212 9-198 (198)
27 4h2k_A Succinyl-diaminopimelat 100.0 5.9E-28 2E-32 207.6 18.0 151 37-188 5-168 (269)
28 2v8h_A Beta-alanine synthase; 100.0 2.9E-28 1E-32 225.2 16.7 194 36-247 30-290 (474)
29 3n5f_A L-carbamoylase, N-carba 100.0 3.1E-27 1.1E-31 214.3 22.7 192 37-246 4-253 (408)
30 3t68_A Succinyl-diaminopimelat 99.9 2.3E-27 7.9E-32 203.8 14.5 150 38-188 6-168 (268)
31 2fvg_A Endoglucanase; TM1049, 99.9 7.8E-22 2.7E-26 174.8 9.0 162 43-233 3-246 (340)
32 2gre_A Deblocking aminopeptida 99.8 7.7E-20 2.6E-24 162.5 13.7 145 37-187 5-242 (349)
33 1vhe_A Aminopeptidase/glucanas 99.8 7.8E-19 2.7E-23 157.4 14.1 144 38-187 7-240 (373)
34 1tkj_A Aminopeptidase, SGAP; d 99.8 3.2E-19 1.1E-23 154.2 10.9 137 37-187 6-161 (284)
35 2wyr_A Cobalt-activated peptid 99.8 5.9E-19 2E-23 155.7 12.7 139 40-187 4-229 (332)
36 1rtq_A Bacterial leucyl aminop 99.7 6.9E-18 2.3E-22 146.9 12.2 142 37-187 19-180 (299)
37 1y0y_A FRV operon protein FRVX 99.7 1.6E-17 5.6E-22 147.6 11.5 139 40-188 8-237 (353)
38 2wzn_A TET3, 354AA long hypoth 99.7 9.3E-20 3.2E-24 158.6 -7.2 186 41-242 12-201 (354)
39 3tc8_A Leucine aminopeptidase; 99.7 1.1E-15 3.9E-20 133.3 18.0 143 38-186 25-200 (309)
40 1vho_A Endoglucanase; structur 99.7 2.4E-16 8.2E-21 139.6 12.4 144 38-187 5-228 (346)
41 1ylo_A Hypothetical protein SF 99.7 5.3E-16 1.8E-20 137.4 14.3 140 42-187 7-225 (348)
42 3gux_A Putative Zn-dependent e 99.6 3.3E-15 1.1E-19 130.6 15.9 143 38-186 27-203 (314)
43 2afw_A Glutaminyl-peptide cycl 99.6 1.9E-15 6.4E-20 133.2 12.7 127 37-173 30-190 (329)
44 3cpx_A Aminopeptidase, M42 fam 99.6 7E-16 2.4E-20 135.5 6.8 140 35-187 14-219 (321)
45 3kl9_A PEPA, glutamyl aminopep 99.5 7.2E-13 2.5E-17 117.6 15.2 67 39-106 4-72 (355)
46 4fuu_A Leucine aminopeptidase; 99.4 8E-12 2.8E-16 109.0 17.5 145 38-186 25-201 (309)
47 4fai_A CG5976, isoform B; alph 99.4 6.1E-12 2.1E-16 110.7 14.7 137 38-186 38-204 (330)
48 3pb6_X Glutaminyl-peptide cycl 99.4 2.8E-12 9.5E-17 112.6 11.1 126 38-173 39-194 (330)
49 2vpu_A TET3, 354AA long hypoth 99.4 3.7E-12 1.3E-16 112.9 11.7 67 39-107 10-77 (354)
50 4f9u_A CG32412; alpha/beta hyd 99.4 7.9E-12 2.7E-16 109.1 13.6 121 42-173 15-163 (312)
51 3isx_A Endoglucanase; TM1050, 99.3 1.3E-11 4.4E-16 108.9 12.1 66 39-106 12-77 (343)
52 2ek8_A Aminopeptidase; metallo 98.9 5.4E-09 1.8E-13 94.8 10.2 99 59-173 172-285 (421)
53 3iib_A Peptidase M28; YP_92679 98.8 7.4E-09 2.5E-13 94.5 9.3 102 58-173 203-316 (444)
54 3fed_A Glutamate carboxypeptid 98.5 2.6E-07 8.9E-12 88.5 7.9 77 81-173 312-394 (707)
55 3kas_A Transferrin receptor pr 98.4 3.2E-07 1.1E-11 86.9 7.7 78 81-174 266-350 (640)
56 3k9t_A Putative peptidase; str 93.8 0.24 8.2E-06 44.2 8.5 81 84-186 168-252 (435)
57 1y7e_A Probable M18-family ami 91.6 0.11 3.6E-06 47.3 3.3 50 56-106 34-100 (458)
58 2hc9_A Leucine aminopeptidase 90.5 6.9 0.00024 35.5 14.0 119 37-162 166-307 (491)
59 2glf_A Probable M18-family ami 88.6 0.8 2.7E-05 41.4 6.4 50 56-105 32-96 (450)
60 2ijz_A Probable M18-family ami 88.4 0.14 4.8E-06 46.1 1.3 60 46-105 7-85 (428)
61 3h8g_F Cytosol aminopeptidase; 87.5 8.6 0.00029 35.0 12.4 112 37-162 179-322 (497)
62 1gyt_A Cytosol aminopeptidase; 87.4 8.9 0.0003 35.0 12.6 112 37-162 180-325 (503)
63 3jru_B Probable cytosol aminop 87.2 9.4 0.00032 34.7 12.5 112 37-162 175-317 (490)
64 3pei_A Cytosol aminopeptidase; 87.0 8.9 0.0003 34.8 12.2 112 37-162 163-306 (486)
65 1lam_A Leucine aminopeptidase; 86.9 9 0.00031 34.8 12.2 119 37-162 160-305 (484)
66 3kzw_A Cytosol aminopeptidase; 86.4 11 0.00037 34.4 12.4 112 37-162 196-338 (515)
67 4efd_A Aminopeptidase; structu 86.2 13 0.00045 33.9 12.8 111 38-162 204-345 (522)
68 3ij3_A Cytosol aminopeptidase; 86.1 12 0.00042 33.8 12.5 119 37-162 166-305 (482)
69 3kr4_A M17 leucyl aminopeptida 80.9 33 0.0011 31.3 13.2 112 38-162 205-349 (528)
70 2glj_A Probable M18-family ami 77.9 0.58 2E-05 42.4 0.7 47 58-105 38-105 (461)
71 3fed_A Glutamate carboxypeptid 76.3 5.7 0.0002 37.9 7.2 53 23-77 12-67 (707)
72 2ek8_A Aminopeptidase; metallo 73.4 2.7 9.3E-05 37.3 3.9 40 38-77 16-57 (421)
73 3iib_A Peptidase M28; YP_92679 63.1 19 0.00064 32.1 7.3 40 38-77 21-65 (444)
74 3kas_A Transferrin receptor pr 53.4 13 0.00044 35.1 4.5 50 24-75 6-60 (640)
75 2ijz_A Probable M18-family ami 48.9 11 0.00036 33.7 3.1 44 121-169 227-273 (428)
76 2glj_A Probable M18-family ami 44.0 12 0.00041 33.8 2.6 31 130-164 264-294 (461)
77 1y7e_A Probable M18-family ami 43.3 6 0.00021 35.7 0.5 41 121-164 247-289 (458)
78 3vat_A Dnpep, aspartyl aminope 31.8 1.3E+02 0.0044 27.3 7.4 51 55-105 50-119 (496)
79 4ds1_A Dynein light chain 1, c 30.9 1.3E+02 0.0044 20.6 6.8 21 56-76 42-63 (97)
80 2glf_A Probable M18-family ami 30.0 42 0.0014 30.1 3.8 27 136-164 255-281 (450)
81 1kaf_A Transcription regulator 25.4 1.1E+02 0.0036 21.6 4.4 36 54-89 4-40 (108)
82 5nul_A Flavodoxin; electron tr 24.7 59 0.002 23.1 3.3 27 51-77 6-32 (138)
83 1yo3_A Dynein light chain 1; s 23.6 1.1E+02 0.0039 21.1 4.4 20 56-75 47-67 (102)
84 2qsb_A UPF0147 protein TA0600; 23.3 1.5E+02 0.0052 20.0 4.7 40 35-74 10-49 (89)
85 4eme_A M18 aspartyl aminopepti 22.5 3E+02 0.01 25.3 8.1 50 56-105 22-91 (571)
86 2fz5_A Flavodoxin; alpha/beta 20.7 87 0.003 21.9 3.5 28 50-77 6-33 (137)
87 3rjs_A Dynein light chain moto 20.2 1.6E+02 0.0054 19.7 4.5 18 56-73 34-52 (89)
88 2e8g_A Hypothetical protein PH 20.1 48 0.0016 27.0 2.0 53 25-77 67-123 (241)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=3.7e-43 Score=320.15 Aligned_cols=232 Identities=58% Similarity=0.962 Sum_probs=194.2
Q ss_pred HHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEecc
Q 024905 25 LTNQVMISAQQDK--DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADM 102 (260)
Q Consensus 25 ~~~~i~~~i~~~~--~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~ 102 (260)
|++++.+++++++ +++++++++|++|||+|++|.++++||.++|+++|++++..+..+|+++++++++.|+|+|+|||
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 5667888899988 99999999999999999999999999999999999998875557999999976522899999999
Q ss_pred CCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceE
Q 024905 103 DALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAI 182 (260)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~ 182 (260)
||||+++...|||.+.++|++||||+|++++++|+|++.|++.+.+++++|.|+|+++||++.|++++++++.++++|++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 99999887888998888999999999999999999999999987778999999999999933899999998877668999
Q ss_pred EEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 024905 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLR 256 (260)
Q Consensus 183 i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~ 256 (260)
+++|.++++|+|.+....+.+++|..+++|+++|+++|+|.|+.|+|||..+++++..|+.+..++.+|..+.+
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t 246 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV 246 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcE
Confidence 99887766778876555666789999999999999999999999999999999999999988766556554434
No 2
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=3e-42 Score=316.61 Aligned_cols=225 Identities=32% Similarity=0.501 Sum_probs=181.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec--------------------------
Q 024905 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------------------------- 79 (260)
Q Consensus 26 ~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------- 79 (260)
.+++.++++++++++++++++|+++||++++|.++++||.++|+++||+++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (445)
T 3io1_A 2 SLQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE 81 (445)
T ss_dssp -CCHHHHHHTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence 356778899999999999999999999999999999999999999999887631
Q ss_pred -------------CCceEEEEEcCC-CCcEEEEEeccCCCCCCCCCCCccc-------cccCCccccCCCcHHHHHHHHH
Q 024905 80 -------------AKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWEHK-------SKIDGKMHACGHDVHTTMLLGA 138 (260)
Q Consensus 80 -------------~~~nlia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~~~-------~~~~g~~~g~G~kg~~a~~l~a 138 (260)
+++|++|+++++ ++|+|+|+|||||||+++..+|+++ +..+|++||||+|++++++|++
T Consensus 82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a 161 (445)
T 3io1_A 82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL 161 (445)
T ss_dssp TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence 579999999876 5799999999999999888889644 3467999999999999999999
Q ss_pred HHHHHhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccC
Q 024905 139 AKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRG 218 (260)
Q Consensus 139 ~~~L~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~ 218 (260)
++.|++.+.+++++|.|+|+++||++.|++.|+++|.++++|+++++|+.++.|.|.+.+..+. ..+..+++|+++|++
T Consensus 162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g-~~a~~~~~i~v~Gk~ 240 (445)
T 3io1_A 162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDN-FMATTKFDVQFSGVA 240 (445)
T ss_dssp HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCC-BCEEEEEEEEEECCC
T ss_pred HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCC-eeEEEEEEEEEEeec
Confidence 9999988778999999999999997799999999998888999999998766677876553221 124579999999999
Q ss_pred CCc-CCCCCCcCHHHHHHHHHHHHHHHHhhcCCCC
Q 024905 219 GHA-AMPHSTIDPILTASSVILALQQLISREADPL 252 (260)
Q Consensus 219 ~Hs-~~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~ 252 (260)
+|+ +.|+.|+|||..+++++..|+.+. ++.+|.
T Consensus 241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~~~ 274 (445)
T 3io1_A 241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHSAGA 274 (445)
T ss_dssp SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTTBC
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcCCC
Confidence 999 599999999999999999999884 345553
No 3
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1e-40 Score=302.85 Aligned_cols=223 Identities=44% Similarity=0.735 Sum_probs=177.1
Q ss_pred hhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee-cCCceEEEEEcCC-CCcEEEEEeccCCCCCCCCCC
Q 024905 35 QDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-VAKTGIVAQIGSG-SRPVVVLRADMDALPLQELVE 112 (260)
Q Consensus 35 ~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nlia~~~~~-~~~~i~l~~H~DtVp~~~~~~ 112 (260)
+.++++++++++|++|||+|++|.++++||.++|+++|++++.. .+++|+++++++. ++|+|+|+||+||||+++...
T Consensus 29 ~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~ 108 (404)
T 1ysj_A 29 AFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTN 108 (404)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCC
Confidence 34578899999999999999999999999999999999988653 2467999999765 568999999999999887666
Q ss_pred CccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceEEEecccCCCC
Q 024905 113 WEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIP 192 (260)
Q Consensus 113 w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~ 192 (260)
+||.+.++|++||||+|++++++|+|++.|++.+..++++|.|+|+++||.+.|++++++++.++++|+++++|.+|+.+
T Consensus 109 ~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~ 188 (404)
T 1ysj_A 109 LPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLP 188 (404)
T ss_dssp CTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSC
T ss_pred CCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCC
Confidence 67777778999999999999999999999998777789999999999999988999999988776789999988777766
Q ss_pred CcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCCCcce
Q 024905 193 TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRG 257 (260)
Q Consensus 193 ~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~~ 257 (260)
.|.+....|..++|..+++|+++|+++|++.|+.|+|||..+++++..|+++..++.+|+.+.++
T Consensus 189 ~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 253 (404)
T 1ysj_A 189 VGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVV 253 (404)
T ss_dssp TTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEE
T ss_pred CceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEE
Confidence 67665544544678999999999999999999999999999999999999887666666554443
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.4e-38 Score=290.79 Aligned_cols=215 Identities=18% Similarity=0.232 Sum_probs=188.1
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee---------------------cC
Q 024905 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP---------------------VA 80 (260)
Q Consensus 22 ~~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---------------------~~ 80 (260)
+..+++++.++++++++++++++++|+++||+|++|.++++||.++|+++|++++.. ++
T Consensus 10 ~~~~~~~i~~~i~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (433)
T 3pfo_A 10 SDAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAG 89 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGG
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCC
Confidence 667889999999999999999999999999999999999999999999999988642 45
Q ss_pred CceEEEEEcCC-CCcEEEEEeccCCCCCCCCCCCc---ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCce
Q 024905 81 KTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGT 152 (260)
Q Consensus 81 ~~nlia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~ 152 (260)
++|++++++++ ++|+|+|+|||||||+++...|. |.+ +++|++||||+ |++++++|++++.|++.+.+++++
T Consensus 90 ~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 90 SMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp CEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred CcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 78999999754 57999999999999998777785 443 57899999986 899999999999999887778999
Q ss_pred EEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecccCCCCCc-ceEeecccccceeeEEEEEEEccCCCcCCCCCCcCH
Q 024905 153 VRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTG-SIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDP 230 (260)
Q Consensus 153 i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~-~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nA 230 (260)
|.|+|+++||.| .|++.++++++ ++|++++.+ |++ .+. .+++|..+++|+++|+++|+|.|+.|+||
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nA 238 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRGY--RADACLIPE-----PTGHTLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSA 238 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC-----CCSSCEE----EEECEEEEEEEEEECCCCBGGGGGGSCCH
T ss_pred EEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC-----CCCCceE----EecceEEEEEEEEEcCCCccCCCCcCcCH
Confidence 999999999986 79999998864 579999854 333 222 34789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 024905 231 ILTASSVILALQQLISR 247 (260)
Q Consensus 231 i~~~~~~i~~l~~~~~~ 247 (260)
+..+++++..|+.+..+
T Consensus 239 i~~~~~~i~~l~~l~~~ 255 (433)
T 3pfo_A 239 ILSAMHLIRAFEEYTKE 255 (433)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988764
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=8.6e-37 Score=276.21 Aligned_cols=202 Identities=28% Similarity=0.371 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecC--CceEEEEEcCC-CCcEEEEEec
Q 024905 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA--KTGIVAQIGSG-SRPVVVLRAD 101 (260)
Q Consensus 25 ~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nlia~~~~~-~~~~i~l~~H 101 (260)
|++++.++++++++++++++++|+++||+|++|.++++||.++|+++|++++.... ++|++++++++ ++|+|+|.||
T Consensus 3 ~~~~i~~~~~~~~~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ah 82 (394)
T 3ram_A 3 EKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAE 82 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEEe
Confidence 56889999999999999999999999999999999999999999999999876433 57999999765 5799999999
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC--CChH-HHHHcCCCCC
Q 024905 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAF-HMIKEGALGD 178 (260)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g--~G~~-~~~~~g~~~~ 178 (260)
||||| |++|+||++...+++++|++.|++.+..++++|.|+|+++||.| .|++ .|+++|.+++
T Consensus 83 ~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~~ 148 (394)
T 3ram_A 83 YDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQ 148 (394)
T ss_dssp CCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGGG
T ss_pred cccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCccc
Confidence 99999 66899999988899999999999876678999999999999986 6999 9999988777
Q ss_pred CceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcC-CCCCCcCHHHHHHHHHHHHHHHHhh
Q 024905 179 SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISR 247 (260)
Q Consensus 179 ~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~ 247 (260)
+|+++++|+.++. ..+..++|..+++|+++|+++|+| .|+.|+|||..+++++..|+.+...
T Consensus 149 ~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~ 211 (394)
T 3ram_A 149 IDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQH 211 (394)
T ss_dssp CSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhh
Confidence 8999998875432 234457899999999999999999 9999999999999999999988553
No 6
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=8.7e-36 Score=266.13 Aligned_cols=202 Identities=15% Similarity=0.156 Sum_probs=169.7
Q ss_pred HHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcC-C-CCcEEEEEeccCCCCCCCC
Q 024905 33 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS-G-SRPVVVLRADMDALPLQEL 110 (260)
Q Consensus 33 i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~-~-~~~~i~l~~H~DtVp~~~~ 110 (260)
++++++++++++++|++|||+|++|.++++|+.++|+++|++++.. .+|+++++++ . ++|+|+|.||+||||+++
T Consensus 6 i~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~- 82 (356)
T 3ct9_A 6 IPTMTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN- 82 (356)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC--
T ss_pred HhHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC-
Confidence 4566788999999999999999999999999999999999998764 8999999975 4 468999999999999865
Q ss_pred CCC---cccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCC-C-CChHHHHHcCCCCCCce
Q 024905 111 VEW---EHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGALGDSEA 181 (260)
Q Consensus 111 ~~w---~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~-g-~G~~~~~~~g~~~~~d~ 181 (260)
.| ||.+ +++|++||||+ |+++++++++++.|++.+ ++++|.|+|+++||. | .|++++++++ .++|+
T Consensus 83 -~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~ 157 (356)
T 3ct9_A 83 -GWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSF 157 (356)
T ss_dssp -------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSE
T ss_pred -CCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCE
Confidence 46 4554 35899999986 789999999999999876 789999999999998 7 8999999875 35788
Q ss_pred EEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHhhcCCC
Q 024905 182 IFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 251 (260)
Q Consensus 182 ~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~p 251 (260)
++..++.. +.+. ..++|..+++|+++|+++|++.| .|+|||..+++++..|+.+..+..+|
T Consensus 158 ~i~~ep~~----~~i~----~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~ 218 (356)
T 3ct9_A 158 AIVGEPTE----MQPA----IAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESP 218 (356)
T ss_dssp EEECCSBT----TCCE----EEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT
T ss_pred EEEcCCCC----ceEE----EeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccc
Confidence 88754321 2222 34679999999999999999999 99999999999999999887665555
No 7
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=5.3e-36 Score=270.69 Aligned_cols=215 Identities=18% Similarity=0.253 Sum_probs=179.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCCeEeec-----CCceEEEEEcCCCCcEE
Q 024905 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV-----AKTGIVAQIGSGSRPVV 96 (260)
Q Consensus 25 ~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nlia~~~~~~~~~i 96 (260)
+.+++.++++++++++++++++|++|||+|++| .++++||.++|+++|++++... .++|+++++++.++|+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~i 85 (393)
T 1cg2_A 6 RDNVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNL 85 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCCE
T ss_pred hhhHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCceE
Confidence 346788899999999999999999999999865 7899999999999999987643 24699999975445899
Q ss_pred EEEeccCCCCCCC-CCCCccccccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHH
Q 024905 97 VLRADMDALPLQE-LVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMI 171 (260)
Q Consensus 97 ~l~~H~DtVp~~~-~~~w~~~~~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~ 171 (260)
+|+|||||||+.+ ...|||. +++|++||||+ |++++++|+|++.|++.+.+++++|.|+|+++||.| .|++.++
T Consensus 86 ~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~ 164 (393)
T 1cg2_A 86 LLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLI 164 (393)
T ss_dssp EEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHHH
T ss_pred EEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHHH
Confidence 9999999999743 3557887 57899999984 799999999999999988778889999999999987 7999998
Q ss_pred HcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcC-CCCCCcCHHHHHHHHHHHHHHHHh
Q 024905 172 KEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLIS 246 (260)
Q Consensus 172 ~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~ 246 (260)
+++.. ++|+++++++.. .+.+.+. ..++|..+++|+++|+++||| .|+.|+|||..+++++..|+.+.+
T Consensus 165 ~~~~~-~~d~~i~~e~~~-~~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~ 234 (393)
T 1cg2_A 165 QEEAK-LADYVLSFEPTS-AGDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD 234 (393)
T ss_dssp HHHHH-HCSEEEECCCEE-TTSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB
T ss_pred HHHhh-cCCEEEEeCCCC-CCCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC
Confidence 86432 578999876421 0234332 246899999999999999997 799999999999999999988753
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.8e-35 Score=267.16 Aligned_cols=205 Identities=18% Similarity=0.288 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee--cCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCc-
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE- 114 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~- 114 (260)
+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|+++++ +.++|+|+|+|||||||+++..+|.
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GTKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CCCCCEEEEEcccCCcCCCCcccCCC
Confidence 56899999999999999999999999999999999988763 4578999999 3446899999999999998777884
Q ss_pred --ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC--CChHHHHHcCCC--CCCceEEE
Q 024905 115 --HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGAL--GDSEAIFG 184 (260)
Q Consensus 115 --~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~g~~--~~~d~~i~ 184 (260)
|.+ ++||++||||+ |++++++|.+++.|++.+.+++++|.|+|++|||.+ .|++.+++.... ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 554 57999999986 799999999999998877778999999999999975 799988764321 24688887
Q ss_pred ecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHh
Q 024905 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLIS 246 (260)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~ 246 (260)
.++.+..+.+.. +. .+++|..+++|+++|+++|++.|+.|+|||..+++++..|+.+..
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~ 223 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVW 223 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCC
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccc
Confidence 665432333332 12 246799999999999999999999999999999999999988653
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=2.8e-35 Score=263.83 Aligned_cols=206 Identities=21% Similarity=0.304 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEe--ecCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCc
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (260)
++++++++++|+++||+|++|.++++||.++|+++|++++. .++.+|++++++ .++|+|+|+|||||||.++...|.
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCC
Confidence 36789999999999999999999999999999999999875 346789999984 456999999999999998777785
Q ss_pred ---ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC--CChHHHHHcCCC--CCCceEE
Q 024905 115 ---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGAL--GDSEAIF 183 (260)
Q Consensus 115 ---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~g~~--~~~d~~i 183 (260)
|.+ ++||++||||+ |+++++++.+++.|++.+.+++++|.|+|+++||.+ .|++.+++.... ..+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 444 36999999986 799999999999998877778999999999999987 599988764221 2478888
Q ss_pred EecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHh
Q 024905 184 GMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLIS 246 (260)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~ 246 (260)
+.++.+..+.+.. +. .+.+|..+++++++|+++|++.|+.|+||+..+++++.+|+.+..
T Consensus 161 ~~e~~~~~~~g~~-i~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~ 220 (377)
T 3isz_A 161 VGEPSSAKNLGDV-VK--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQW 220 (377)
T ss_dssp ECCCCBSSSTTSE-EE--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCC
T ss_pred EcCCCCcccCCce-EE--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccc
Confidence 8665433333332 12 236799999999999999999999999999999999999988643
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=268.69 Aligned_cols=220 Identities=16% Similarity=0.140 Sum_probs=178.2
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHhCCCC--Ccc------hHHHHHHHHHHHHhCCCCeEeec--------C-----
Q 024905 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPEL--LFE------EHNTSALIRRELDKLGIPYAYPV--------A----- 80 (260)
Q Consensus 22 ~~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~----- 80 (260)
++++.+++.++++++++++++++++|++|||+ |++ |.++++||.++|+++|++++... +
T Consensus 9 ~~~~~~~i~~~i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~ 88 (485)
T 3dlj_A 9 PPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPI 88 (485)
T ss_dssp CSTTHHHHHHHHHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEEC
T ss_pred ChHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCC
Confidence 45667889999999999999999999999999 876 68999999999999999887642 2
Q ss_pred CceEEEEEcCC-CCcEEEEEeccCCCCCCCCCCCc---ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCce
Q 024905 81 KTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGT 152 (260)
Q Consensus 81 ~~nlia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~ 152 (260)
.+|++++++++ ++|+|+|+|||||||+++.+.|. |.+ +++|++||||+ |++++++|+|+++|++.+.+++++
T Consensus 89 ~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 168 (485)
T 3dlj_A 89 PPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVN 168 (485)
T ss_dssp CCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSE
T ss_pred CcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 35899999765 46999999999999998766774 554 47999999986 799999999999999988889999
Q ss_pred EEEEeecCCCCC-CChHHHHHcCC---CCCCceEEEecccCC-CCCcceEeecccccceeeEEEEEEEccCC--CcCCCC
Q 024905 153 VRILFQPAEEGG-AGAFHMIKEGA---LGDSEAIFGMHIDVG-IPTGSIASISGPHLAATSVFNVKVEGRGG--HAAMPH 225 (260)
Q Consensus 153 i~~~~~~dEE~g-~G~~~~~~~g~---~~~~d~~i~~~~~~~-~~~~~~~~~~g~~~~G~~~~~i~v~G~~~--Hs~~p~ 225 (260)
|.|+|+++||.| .|++.+++++. ++++|++++.|+... .....+ . .+++|..+++|+++|+++ |+|.
T Consensus 169 v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~--~g~~g~~~~~i~v~G~~~~~H~~~-- 242 (485)
T 3dlj_A 169 IKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAI--T--YGTRGNSYFMVEVKCRDQDFHSGT-- 242 (485)
T ss_dssp EEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEE--E--EEECEEEEEEEEEESCSSCEETTT--
T ss_pred EEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeE--E--EeccceEEEEEEEEECCCCCcCCC--
Confidence 999999999987 79999998753 457899999875211 011222 2 236899999999999999 9997
Q ss_pred CCcCHHHHHHHHHHHHHHHHhh
Q 024905 226 STIDPILTASSVILALQQLISR 247 (260)
Q Consensus 226 ~g~nAi~~~~~~i~~l~~~~~~ 247 (260)
.|.||+..+..++..|..+.++
T Consensus 243 ~g~~a~~~~~~l~~~l~~l~~~ 264 (485)
T 3dlj_A 243 FGGILHEPMADLVALLGSLVDS 264 (485)
T ss_dssp STTSSCCHHHHHHHHHTTSBCT
T ss_pred CCccccCHHHHHHHHHHhhCCC
Confidence 3566666666666666665543
No 11
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=2.5e-34 Score=266.26 Aligned_cols=218 Identities=13% Similarity=0.139 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHhhHH-HHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCCeEee--cCCceEEEEEcCC--CCcE
Q 024905 24 ILTNQVMISAQQDKD-WLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSG--SRPV 95 (260)
Q Consensus 24 ~~~~~i~~~i~~~~~-~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~--~~~~nlia~~~~~--~~~~ 95 (260)
..++++.++++++++ ++++++++|++|||+|++| .++++||.++|+++|++++.. ++++|++++++++ ++|+
T Consensus 29 ~~m~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 29 SEQEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred chHHHHHHHHHhhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 334788999999999 9999999999999999876 899999999999999988764 3479999999753 4689
Q ss_pred EEEEeccCCCCCCCCCCC---cccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CCh
Q 024905 96 VVLRADMDALPLQELVEW---EHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGA 167 (260)
Q Consensus 96 i~l~~H~DtVp~~~~~~w---~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~ 167 (260)
|+|+|||||||+++.+.| ||.+ ++||++||||+ |++++++|+|++.|++.+..++++|.|+|+++||.| .|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 999999999999876778 4554 56999999985 899999999999999875578899999999999987 789
Q ss_pred HHHHHcC--CCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccC--CCcCCCCCCcCHHHHHHHHHHHHHH
Q 024905 168 FHMIKEG--ALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRG--GHAAMPHSTIDPILTASSVILALQQ 243 (260)
Q Consensus 168 ~~~~~~g--~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~--~Hs~~p~~g~nAi~~~~~~i~~l~~ 243 (260)
+.+++++ .++++|++++.++... ..+...+ ..+++|..+++|+++|++ +||+.|+.|+|||..+++++..|++
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~i--~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~ 265 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQGTKN-ALEQLEI--SGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRA 265 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCCBBC-TTSCEEE--ECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBC
T ss_pred HHHHHHhHhhccCCCEEEECCCCcc-CCCCeeE--EEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhC
Confidence 8888764 2333788887643211 1122222 345889999999999999 8999999999999999999999876
Q ss_pred H
Q 024905 244 L 244 (260)
Q Consensus 244 ~ 244 (260)
+
T Consensus 266 ~ 266 (481)
T 2pok_A 266 A 266 (481)
T ss_dssp T
T ss_pred C
Confidence 5
No 12
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.5e-34 Score=265.74 Aligned_cols=214 Identities=13% Similarity=0.080 Sum_probs=173.1
Q ss_pred HHHHHHHHHhhH-HHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhCCCC---eEee--cC-CceEEEEE
Q 024905 26 TNQVMISAQQDK-DWLVSVRRQIHENPELLFE----------EHNTSALIRRELDKLGIP---YAYP--VA-KTGIVAQI 88 (260)
Q Consensus 26 ~~~i~~~i~~~~-~~~~~~~~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~---~~~~--~~-~~nlia~~ 88 (260)
.+++.+++++++ +++++++++|++|||+|++ |.++++|+.++|+++|++ ++.. .+ ++|++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~ 84 (472)
T 3pfe_A 5 PQGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEI 84 (472)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEE
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEE
Confidence 357888999988 8999999999999999964 899999999999999995 4332 23 68999999
Q ss_pred cCCCCcEEEEEeccCCCCCCCCCCC-----cccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeec
Q 024905 89 GSGSRPVVVLRADMDALPLQELVEW-----EHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQP 159 (260)
Q Consensus 89 ~~~~~~~i~l~~H~DtVp~~~~~~w-----~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~ 159 (260)
++.++|+|+|+|||||||+. +.| ||.+ +++|++||||+ |++++++|+|+++|++.+..++ +|.|+|++
T Consensus 85 ~g~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~ 161 (472)
T 3pfe_A 85 PGQIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEA 161 (472)
T ss_dssp CCSEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEES
T ss_pred cCCCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEe
Confidence 76546899999999999985 356 4555 57999999986 7999999999999998876666 99999999
Q ss_pred CCCCC-CChHHHHHcC--CCCCCceEEEecccCCCCCcceEeecccccceeeEEE--EEEEccCCCcCCCCCC-cCHHHH
Q 024905 160 AEEGG-AGAFHMIKEG--ALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFN--VKVEGRGGHAAMPHST-IDPILT 233 (260)
Q Consensus 160 dEE~g-~G~~~~~~~g--~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~--i~v~G~~~Hs~~p~~g-~nAi~~ 233 (260)
+||.| .|++.+++++ .+.++|+++++|+.. .+.+...+. .+++|..+++ |+++|+++|+|.|+.+ .|||..
T Consensus 162 ~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~ 238 (472)
T 3pfe_A 162 CEESGSYDLPFYIELLKERIGKPSLVICLDSGA-GNYEQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFRV 238 (472)
T ss_dssp CGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBC-SCSSSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHH
T ss_pred CCCCCChhHHHHHHHhHhhccCCCEEEEeCCCc-CCCCCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHH
Confidence 99987 7999999875 344689999988532 122222222 2367888777 4558999999988755 599999
Q ss_pred HHHHHHHHHHHH
Q 024905 234 ASSVILALQQLI 245 (260)
Q Consensus 234 ~~~~i~~l~~~~ 245 (260)
+++++.+|+++.
T Consensus 239 ~~~~i~~l~~~~ 250 (472)
T 3pfe_A 239 ARQLISRIEDEN 250 (472)
T ss_dssp HHHHHHHHBCTT
T ss_pred HHHHHHHhhCcC
Confidence 999999999873
No 13
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.2e-34 Score=257.83 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCC-eEeecCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCcc
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH 115 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~ 115 (260)
++++++++++|++|||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++
T Consensus 12 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~ 89 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPS 89 (369)
T ss_dssp CSCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSC
T ss_pred HHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCC
Confidence 46789999999999999999999999999999999884 44433467999999766679999999999999875 3443
Q ss_pred ccccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC---CChHHHHHcCC-CCCCceEEEeccc
Q 024905 116 KSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG---AGAFHMIKEGA-LGDSEAIFGMHID 188 (260)
Q Consensus 116 ~~~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g---~G~~~~~~~g~-~~~~d~~i~~~~~ 188 (260)
. .++|++||||+ |++++++|+|++.|++. ..++++|.|+|+++||.| .|++.+++++. ..++|+++..++
T Consensus 90 ~-~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep- 166 (369)
T 3tx8_A 90 R-VEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEP- 166 (369)
T ss_dssp E-ECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCC-
T ss_pred e-EECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeCC-
Confidence 3 35899999986 69999999999999874 468999999999999987 48999988752 124688887543
Q ss_pred CCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHhhc
Q 024905 189 VGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE 248 (260)
Q Consensus 189 ~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~ 248 (260)
+. +.+. .+++|..+++|+++|+++|+|.|+.|+||+..+++++..|+++..+.
T Consensus 167 -~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~ 219 (369)
T 3tx8_A 167 -TG--GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAE 219 (369)
T ss_dssp -CT--TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCE
T ss_pred -CC--Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccc
Confidence 21 3332 34789999999999999999999999999999999999999886553
No 14
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=5.7e-34 Score=264.56 Aligned_cols=213 Identities=15% Similarity=0.183 Sum_probs=160.0
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCCeEeecCCceEEEEEc-
Q 024905 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEE------------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIG- 89 (260)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~- 89 (260)
+.|.+++.++++++++++++++++|++|||+|++| .++++|+.++|+++||+++..+ |+++...
T Consensus 19 ~~m~~~i~~~i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~ 95 (492)
T 3khx_A 19 SHMASMWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEA 95 (492)
T ss_dssp ----CTTHHHHHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEE
T ss_pred chhHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEe
Confidence 44667889999999999999999999999999876 4899999999999999987642 4454443
Q ss_pred CCCCcEEEEEeccCCCCCCCCCCC---cccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 90 SGSRPVVVLRADMDALPLQELVEW---EHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 90 ~~~~~~i~l~~H~DtVp~~~~~~w---~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
+.++|+|+|+||+||||+++ .| ||.+ ++||++||||+ |++++++|+|+++|++.+.+++++|.|+|++|||
T Consensus 96 g~~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 173 (492)
T 3khx_A 96 GKGNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEE 173 (492)
T ss_dssp ECSSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTT
T ss_pred CCCCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcc
Confidence 23358999999999999865 57 4554 57999999985 8999999999999999888889999999999999
Q ss_pred CC-CChHHHHHcCCCCCCceEEEecccC-----------------------------------C-----CCCcc--eEee
Q 024905 163 GG-AGAFHMIKEGALGDSEAIFGMHIDV-----------------------------------G-----IPTGS--IASI 199 (260)
Q Consensus 163 ~g-~G~~~~~~~g~~~~~d~~i~~~~~~-----------------------------------~-----~~~~~--~~~~ 199 (260)
.| .|+++++++.. .+|+.+..+... + .|... +...
T Consensus 174 ~g~~g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~e 251 (492)
T 3khx_A 174 SDWKCTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLV 251 (492)
T ss_dssp CCCCTTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEE
T ss_pred CCCcCHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeec
Confidence 88 89999998742 244444322100 0 00000 1111
Q ss_pred c---------------ccccceee-----EEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHH
Q 024905 200 S---------------GPHLAATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ 242 (260)
Q Consensus 200 ~---------------g~~~~G~~-----~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~ 242 (260)
+ ..+++|.. +++|+++|+++|+|.|+.|+|||..+++++.+|+
T Consensus 252 pt~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~ 314 (492)
T 3khx_A 252 KENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLN 314 (492)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSC
T ss_pred ccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcC
Confidence 0 12347888 9999999999999999999999999999999886
No 15
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=9.4e-34 Score=262.04 Aligned_cols=216 Identities=14% Similarity=0.135 Sum_probs=179.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCCeEeec--------CC-----ceEEE
Q 024905 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAYPV--------AK-----TGIVA 86 (260)
Q Consensus 26 ~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nlia 86 (260)
.+++.+++++..+++++++++|++|||+|++| .++++||.++|+++|++++... ++ +|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a 87 (479)
T 2zog_A 8 LKAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLG 87 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEE
Confidence 36788889999999999999999999999876 7999999999999999887642 23 89999
Q ss_pred EEcCC-CCcEEEEEeccCCCCCCCCCCCc---ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEee
Q 024905 87 QIGSG-SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (260)
Q Consensus 87 ~~~~~-~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~ 158 (260)
+++++ ++|+|+|+|||||||+++...|. |.+ ++||++||||+ |++++++|+|++.|++.+.+++++|.|+|+
T Consensus 88 ~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~ 167 (479)
T 2zog_A 88 KLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLE 167 (479)
T ss_dssp EECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEE
T ss_pred EecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEe
Confidence 99765 46899999999999987666784 444 46999999983 799999999999999988788999999999
Q ss_pred cCCCCC-CChHHHHHcC---CCCCCceEEEecccCC-CCCcceEeecccccceeeEEEEEEEccC--CCcCCCCCCcCHH
Q 024905 159 PAEEGG-AGAFHMIKEG---ALGDSEAIFGMHIDVG-IPTGSIASISGPHLAATSVFNVKVEGRG--GHAAMPHSTIDPI 231 (260)
Q Consensus 159 ~dEE~g-~G~~~~~~~g---~~~~~d~~i~~~~~~~-~~~~~~~~~~g~~~~G~~~~~i~v~G~~--~Hs~~p~~g~nAi 231 (260)
++||.| .|++.+++++ ++.++|++++.++... ...+.+. .+++|..+++|+++|++ +|||.| |.||+
T Consensus 168 ~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~ai 241 (479)
T 2zog_A 168 GMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGSVH 241 (479)
T ss_dssp SCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTTSC
T ss_pred cccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCCcc
Confidence 999987 7999999875 4446899998765221 1122222 34789999999999999 999985 78999
Q ss_pred HHHHHHHHHHHHHHhh
Q 024905 232 LTASSVILALQQLISR 247 (260)
Q Consensus 232 ~~~~~~i~~l~~~~~~ 247 (260)
..+++++..|+++.++
T Consensus 242 ~~~~~~i~~l~~l~~~ 257 (479)
T 2zog_A 242 EAMTDLISLMGCLVDK 257 (479)
T ss_dssp CHHHHHHHHHTTSBCT
T ss_pred CHHHHHHHHHHhcCCC
Confidence 9999999999877654
No 16
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.5e-34 Score=259.10 Aligned_cols=206 Identities=16% Similarity=0.236 Sum_probs=166.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CCceEEEEEcCC----CCcE
Q 024905 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGSG----SRPV 95 (260)
Q Consensus 27 ~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nlia~~~~~----~~~~ 95 (260)
+.+..+++.+++++++++++|++|||+|++|.++++||.++|+++|++++... ..+|++++++++ ++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~ 92 (396)
T 3rza_A 13 ENLYFQGMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPK 92 (396)
T ss_dssp ------CCSCHHHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCC
T ss_pred cceeEEEeecHHHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCe
Confidence 34556677788999999999999999999999999999999999999987643 268999999764 4699
Q ss_pred EEEEeccCCCCCCCCCCCccccccCCccccCCC-------cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CCh
Q 024905 96 VVLRADMDALPLQELVEWEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGA 167 (260)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~-------kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~ 167 (260)
|+|+|||||||+++ .|+.....+|++||||+ |++++++|++++.|++.+. ++++|.|+|+++||.| .|+
T Consensus 93 i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga 169 (396)
T 3rza_A 93 LYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGA 169 (396)
T ss_dssp EEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHHH
T ss_pred EEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHhH
Confidence 99999999999864 34221123499999996 5999999999999988764 6799999999999987 688
Q ss_pred HHHHHcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHH
Q 024905 168 FHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQ 243 (260)
Q Consensus 168 ~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~ 243 (260)
+.+.++++ ++|+.+..++ +.+.+.+.+. .+|..+++|+++|+++|+|.|+.|+||+..+++++..|+.
T Consensus 170 ~~~~~~~~--~~~~~~~~~~--~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~ 237 (396)
T 3rza_A 170 KELNSELL--DADFGYAIDA--SADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKL 237 (396)
T ss_dssp HHCCGGGC--CCSEEEEEEE--SSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCC
T ss_pred hhhchhhc--ccceEEEEec--CCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhccc
Confidence 88876543 3577777654 4455655442 5789999999999999999999999999999999999865
No 17
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2e-33 Score=257.05 Aligned_cols=197 Identities=17% Similarity=0.172 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCC-eEeecCCceEEEEEcCC---CCcEEEEEec
Q 024905 36 DKDWLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG---SRPVVVLRAD 101 (260)
Q Consensus 36 ~~~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nlia~~~~~---~~~~i~l~~H 101 (260)
.++++++++++|++|||+|+ +|.++++||.++|+++|++ ++. +..+|+++++++. ++|+|+|+||
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d~~~nv~a~~~g~~~~~~~~v~l~~H 103 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-DDNGYVMATLPANTDKDVPVIGFLAH 103 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTSCEEEEECCBSSSCCCCEEEEEE
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-CCCcEEEEEeCCCCCCCCCeEEEEEE
Confidence 45788999999999999998 5789999999999999997 765 5689999999754 2589999999
Q ss_pred cCCCCCCCCCCCccccc----cC----------------------------CccccCCC-------cHHHHHHHHHHHHH
Q 024905 102 MDALPLQELVEWEHKSK----ID----------------------------GKMHACGH-------DVHTTMLLGAAKLI 142 (260)
Q Consensus 102 ~DtVp~~~~~~w~~~~~----~~----------------------------g~~~g~G~-------kg~~a~~l~a~~~L 142 (260)
+||||+. ..|+++|. .| |++||||+ |++++++|+|++.|
T Consensus 104 ~DtVp~~--~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L 181 (434)
T 3ife_A 104 LDTATDF--TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYL 181 (434)
T ss_dssp CCBCTTS--CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCC--CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHH
Confidence 9999963 35765541 12 58999986 89999999999999
Q ss_pred HhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcC
Q 024905 143 HQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA 222 (260)
Q Consensus 143 ~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~ 222 (260)
++.+..++++|.|+|++|||.|.|++.+..+. + ++|+++++|+. +.+.+.. +.+|..+++|+++|+++|||
T Consensus 182 ~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag 252 (434)
T 3ife_A 182 IHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPG 252 (434)
T ss_dssp HTCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGG
T ss_pred HhCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCC
Confidence 99877889999999999999998988875443 3 57999998742 3455433 36899999999999999998
Q ss_pred -CCCCCcCHHHHHHHHHHHHHHH
Q 024905 223 -MPHSTIDPILTASSVILALQQL 244 (260)
Q Consensus 223 -~p~~g~nAi~~~~~~i~~l~~~ 244 (260)
.|+.|+|||..+++++..|+.+
T Consensus 253 ~~P~~g~nAi~~aa~~i~~l~~~ 275 (434)
T 3ife_A 253 TAKNKMRNATKLAMEFNGHLPVE 275 (434)
T ss_dssp GCTTTCBCHHHHHHHHHHTSCTT
T ss_pred CCcccchhHHHHHHHHHHhcccc
Confidence 8999999999999999999876
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=6.7e-34 Score=254.62 Aligned_cols=194 Identities=13% Similarity=0.135 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcC---CCCcEEEEEeccCCCCCCCC
Q 024905 37 KDWLVSVRRQIHENPELL---FEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS---GSRPVVVLRADMDALPLQEL 110 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~---~~~~~i~l~~H~DtVp~~~~ 110 (260)
++++++++++|++|||+| ++|.++++||.++|+++|++++.. .+|+++.+++ +++|+|+|.||+||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~--- 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA--- 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---
Confidence 467899999999999999 889999999999999999998764 3788888853 34589999999999985
Q ss_pred CCCccccc-cCCccccCCC---cHHHHHHHHHHHHHHhccCCC---Cce--EEEEeecCCCC-C-CChHHHHHcCCCCCC
Q 024905 111 VEWEHKSK-IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKL---KGT--VRILFQPAEEG-G-AGAFHMIKEGALGDS 179 (260)
Q Consensus 111 ~~w~~~~~-~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~---~~~--i~~~~~~dEE~-g-~G~~~~~~~g~~~~~ 179 (260)
...||.+. ++|++||||+ |++++++|+|++.|++.+.++ +++ |.|+|+++||. | .|++++++++ ++
T Consensus 80 ~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~ 156 (364)
T 2rb7_A 80 EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RA 156 (364)
T ss_dssp CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EE
T ss_pred CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CC
Confidence 35677764 5899999996 689999999999999876555 568 99999999996 5 7999998875 46
Q ss_pred ceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHH
Q 024905 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLI 245 (260)
Q Consensus 180 d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~ 245 (260)
|+++.+ ++++|++ +.. +++|..+++|+++|+++|++.|+.|+|||..+++++..|+.+.
T Consensus 157 d~~i~~--d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~ 215 (364)
T 2rb7_A 157 DYVVAL--DGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLF 215 (364)
T ss_dssp EEEEEC--SSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTS
T ss_pred CEEEEc--cCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhc
Confidence 777764 3467777 433 3679999999999999999999999999999999999998874
No 19
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=1.4e-33 Score=252.96 Aligned_cols=194 Identities=14% Similarity=0.110 Sum_probs=155.9
Q ss_pred HHhhHHHHHHHHHHHHhCCCCC--c---chHHHHHHHHHHHHhCCCCeEeec---CCceEEEEEcCCCCcEEEEEeccCC
Q 024905 33 AQQDKDWLVSVRRQIHENPELL--F---EEHNTSALIRRELDKLGIPYAYPV---AKTGIVAQIGSGSRPVVVLRADMDA 104 (260)
Q Consensus 33 i~~~~~~~~~~~~~l~~ips~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nlia~~~~~~~~~i~l~~H~Dt 104 (260)
++++++++++++++|++|||+| + +|.++++||.++|+ ||+++... +++|+++ +++. |+|+|.||+||
T Consensus 4 ~~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~ 78 (369)
T 2f7v_A 4 MTDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDT 78 (369)
T ss_dssp CCHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCB
T ss_pred hhhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecc
Confidence 4456788999999999999998 8 89999999999999 99887642 4689999 8754 78999999999
Q ss_pred CCCCC-CCCCcccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCC-C-CChHHHHHcCCCC
Q 024905 105 LPLQE-LVEWEHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGALG 177 (260)
Q Consensus 105 Vp~~~-~~~w~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~-g-~G~~~~~~~g~~~ 177 (260)
||+++ ....||.+ ++||++||||+ |++++++|.+++. ++++|.|+|++|||. | .|++++++++.
T Consensus 79 vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~-- 149 (369)
T 2f7v_A 79 VPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL-- 149 (369)
T ss_dssp CCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--
T ss_pred cCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--
Confidence 99875 22234554 56999999986 8999999988765 678999999999998 6 79999998864
Q ss_pred CCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCC-CCcCHHHHHHHHHHHHHHHHhhc
Q 024905 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPH-STIDPILTASSVILALQQLISRE 248 (260)
Q Consensus 178 ~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~-~g~nAi~~~~~~i~~l~~~~~~~ 248 (260)
++|++++.++. .+. +..+++|..+++|+++|+++|+|.|+ .|+|||..+++++..|+.+..+.
T Consensus 150 ~~d~~i~~e~~----~~~----i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~ 213 (369)
T 2f7v_A 150 PYDAVLVAEPT----MSE----AVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESL 213 (369)
T ss_dssp CCSEEEECCCS----TTC----BBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCC----CCc----ceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhh
Confidence 57999886432 122 23457899999999999999999999 89999999999999999887653
No 20
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2.2e-33 Score=251.66 Aligned_cols=195 Identities=15% Similarity=0.234 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CCceEEEEEcCC--CCcEEEEEeccCCCCC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGSG--SRPVVVLRADMDALPL 107 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nlia~~~~~--~~~~i~l~~H~DtVp~ 107 (260)
++++++++++|+++||+|++|.++++||.++|+++|++++... .++|+++++++. ++|+|+|+|||||||+
T Consensus 5 ~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~ 84 (373)
T 3gb0_A 5 QERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVP 84 (373)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCC
Confidence 4678999999999999999999999999999999999987643 258999999764 4699999999999998
Q ss_pred CCCCCCccccccCCccccCCC-------cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCC
Q 024905 108 QELVEWEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDS 179 (260)
Q Consensus 108 ~~~~~w~~~~~~~g~~~g~G~-------kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~ 179 (260)
++ .|+ +..++|++||||+ |++++++|++++.|++.+. ++++|.|+|+++||.| .|++.+..+++ ++
T Consensus 85 ~~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 158 (373)
T 3gb0_A 85 GN--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TA 158 (373)
T ss_dssp CS--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CC
T ss_pred CC--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CC
Confidence 64 342 2356899999986 4899999999999998764 6899999999999987 68888865543 46
Q ss_pred ceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcC-CCCCCcCHHHHHHHHHHHHHH
Q 024905 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQ 243 (260)
Q Consensus 180 d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~ 243 (260)
|+++..++ +.+.+.+.+ ..+|..+++|+++|+++|++ .|+.|+||+..+++++..|+.
T Consensus 159 ~~~~~~~~--~~~~g~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~ 217 (373)
T 3gb0_A 159 KYGYALDS--DGKVGEIVV----AAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPL 217 (373)
T ss_dssp SEEEEEEE--CSCTTEEEE----EECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCC
T ss_pred CEEEEEcC--CCCCCeEEE----cCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhccc
Confidence 78877654 344555544 25789999999999999999 899999999999999998865
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.3e-32 Score=250.19 Aligned_cols=196 Identities=14% Similarity=0.169 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCC-eEeecCCceEEEEEcCC---CCcEEEEEeccCC
Q 024905 39 WLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG---SRPVVVLRADMDA 104 (260)
Q Consensus 39 ~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nlia~~~~~---~~~~i~l~~H~Dt 104 (260)
++++++++|++|||+|+ +|.++++||.++|+++|++ ++. +..+|+++++++. ++|+|+|+|||||
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nvia~~~g~~~~~~~~i~l~aH~D~ 81 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITL-SEKGTLMATLPANVEGDIPAIGFISHVDT 81 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTCCEEEEECCSSCSCCCCEEEEEECCB
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEE-CCCceEEEEECCCCCCCCCceEEEEeccc
Confidence 47889999999999998 7899999999999999998 665 5678999999754 3689999999999
Q ss_pred CCCCCCCCCcccc--------c-----------------------cCCccccCC-----C--cHHHHHHHHHHHHHHhcc
Q 024905 105 LPLQELVEWEHKS--------K-----------------------IDGKMHACG-----H--DVHTTMLLGAAKLIHQRK 146 (260)
Q Consensus 105 Vp~~~~~~w~~~~--------~-----------------------~~g~~~g~G-----~--kg~~a~~l~a~~~L~~~~ 146 (260)
||+.+ .|.+++ . .||++|||| + |++++++|++++.|++.+
T Consensus 82 Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~ 159 (417)
T 1fno_A 82 SPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP 159 (417)
T ss_dssp CTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS
T ss_pred cCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC
Confidence 99865 464422 1 246899999 3 699999999999999887
Q ss_pred CCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcC-CCC
Q 024905 147 DKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPH 225 (260)
Q Consensus 147 ~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~ 225 (260)
.++++|.|+|+++||.|.|++.++++++ ++|+++++++. +.+.+. ..++|..+++|+++|+++|+| .|+
T Consensus 160 -~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~~---~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p~ 229 (417)
T 1fno_A 160 -IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDGG---GVGELE----FENFNAASVNIKIVGNNVHPGTAKG 229 (417)
T ss_dssp -CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCCC---STTBEE----CCBCEEEEEEEEEECBCCCGGGCTT
T ss_pred -CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCCC---CcCeeE----EecCCceeEEEEEEeeccCCCCCcc
Confidence 7889999999999998888888875553 47888886542 456543 347899999999999999999 799
Q ss_pred CCcCHHHHHHHHHHHHHHHHhh
Q 024905 226 STIDPILTASSVILALQQLISR 247 (260)
Q Consensus 226 ~g~nAi~~~~~~i~~l~~~~~~ 247 (260)
.|+|||..+++++..|+.+..+
T Consensus 230 ~g~nAi~~~a~~i~~l~~~~~~ 251 (417)
T 1fno_A 230 VMVNALSLAARIHAEVPADEAP 251 (417)
T ss_dssp TCBCHHHHHHHHHHTSCTTSSG
T ss_pred ccCCHHHHHHHHHHhhhccCCc
Confidence 9999999999999999887544
No 22
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=1.6e-30 Score=239.77 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=162.2
Q ss_pred HHHHHHhhHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEE
Q 024905 29 VMISAQQDKDWLVSVRRQIHENPELLFEE------------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVV 96 (260)
Q Consensus 29 i~~~i~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i 96 (260)
+.++++++++++++++++|++|||+|++| .++++||.++|+++|++++.. +..++++.++ .++|+|
T Consensus 5 ~~~~~~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g-~~~~~i 82 (470)
T 1lfw_A 5 FKELAEAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFG-AGDKRL 82 (470)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEEC-CCSSEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeC-CCCCeE
Confidence 56778888999999999999999999876 789999999999999998764 4567888873 336899
Q ss_pred EEEeccCCCCCCCCCCC---ccccc--cCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CCh
Q 024905 97 VLRADMDALPLQELVEW---EHKSK--IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGA 167 (260)
Q Consensus 97 ~l~~H~DtVp~~~~~~w---~~~~~--~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~ 167 (260)
+|+|||||||+++ +| ||.+. +||++||||+ |++++++|+|++.|++.+.+++++|.|+|+++||.| .|+
T Consensus 83 ~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~ 160 (470)
T 1lfw_A 83 GIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGI 160 (470)
T ss_dssp EEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHH
T ss_pred EEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccH
Confidence 9999999999875 56 56654 6999999984 799999999999999988888999999999999987 789
Q ss_pred HHHHHcCCCCC----Cce----EEEe--------cccCCCC-Ccce---Eeeccc-------------------------
Q 024905 168 FHMIKEGALGD----SEA----IFGM--------HIDVGIP-TGSI---ASISGP------------------------- 202 (260)
Q Consensus 168 ~~~~~~g~~~~----~d~----~i~~--------~~~~~~~-~~~~---~~~~g~------------------------- 202 (260)
+.+++++...+ +|. ++.. +.. +.+ .+.+ ....|.
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~-~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 239 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFK-NDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAY 239 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEEC-CCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEc-cCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHH
Confidence 99988753211 222 1211 100 000 0100 000000
Q ss_pred -------ccceee-----EEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHH
Q 024905 203 -------HLAATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ 242 (260)
Q Consensus 203 -------~~~G~~-----~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~ 242 (260)
+.+|.. +++|+++|+++|++.|+.|+||+..+++++..|+
T Consensus 240 ~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~ 291 (470)
T 1lfw_A 240 ESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYA 291 (470)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSC
T ss_pred HHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCC
Confidence 124554 8999999999999999999999999999999885
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.97 E-value=9.7e-31 Score=242.71 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC----CCcEEEEEeccCCCCCCCCC-
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG----SRPVVVLRADMDALPLQELV- 111 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~----~~~~i~l~~H~DtVp~~~~~- 111 (260)
.+++++++++|++|||+|++|.++++||.++|+++|++++. +..+|+++++++. ++|+|+|.|||||||+.+.+
T Consensus 13 ~~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~-~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~ 91 (490)
T 3mru_A 13 PAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRR-DPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDT 91 (490)
T ss_dssp SHHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEE-CTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTS
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEE-cCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCc
Confidence 46789999999999999999999999999999999999876 4578999999752 46899999999999987643
Q ss_pred --CCcccc----ccCCccccCCC------cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCC
Q 024905 112 --EWEHKS----KIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGD 178 (260)
Q Consensus 112 --~w~~~~----~~~g~~~g~G~------kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~ 178 (260)
+|..+| +++|++||||+ |+++|++|+++ ++ ...++++|.|+|++|||.| .|++.++++. + +
T Consensus 92 ~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~ 165 (490)
T 3mru_A 92 DHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-K 165 (490)
T ss_dssp CCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-C
T ss_pred ccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhcc-c-C
Confidence 685443 46899999997 36777777654 33 3356899999999999988 8999988653 3 4
Q ss_pred CceEEEecccCCCCCcceEe--e------------cccccceeeEEEEEEEc-cCCCcC-CCCCCc-CHHHHHHHHHHHH
Q 024905 179 SEAIFGMHIDVGIPTGSIAS--I------------SGPHLAATSVFNVKVEG-RGGHAA-MPHSTI-DPILTASSVILAL 241 (260)
Q Consensus 179 ~d~~i~~~~~~~~~~~~~~~--~------------~g~~~~G~~~~~i~v~G-~~~Hs~-~p~~g~-nAi~~~~~~i~~l 241 (260)
+|+++.+++. +.|.+.. . ....++|..+++|+++| +++||| .|+.|+ |||..+++++..|
T Consensus 166 ~~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l 242 (490)
T 3mru_A 166 GDILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGH 242 (490)
T ss_dssp SSEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHH
T ss_pred CCEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHH
Confidence 6888887642 2222211 0 02346899999999999 899999 599999 9999999999999
Q ss_pred HH
Q 024905 242 QQ 243 (260)
Q Consensus 242 ~~ 243 (260)
++
T Consensus 243 ~~ 244 (490)
T 3mru_A 243 AQ 244 (490)
T ss_dssp TT
T ss_pred Hh
Confidence 76
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.97 E-value=3.1e-29 Score=232.43 Aligned_cols=197 Identities=20% Similarity=0.234 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC----CCcEEEEEeccCCCCCCCCC-
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG----SRPVVVLRADMDALPLQELV- 111 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~----~~~~i~l~~H~DtVp~~~~~- 111 (260)
.+++++++++|++|||+|++|.++++||.++|+++|++++. +..+|+++++++. ++|+|+|.|||||||+++..
T Consensus 10 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~ 88 (487)
T 2qyv_A 10 PKLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAER-DEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGT 88 (487)
T ss_dssp SHHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEE-CTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC-----
T ss_pred HHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEE-cCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCC
Confidence 46789999999999999999999999999999999998876 3568999999752 35899999999999987653
Q ss_pred --CCc---ccc-ccCCccccCCC------cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCC
Q 024905 112 --EWE---HKS-KIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGD 178 (260)
Q Consensus 112 --~w~---~~~-~~~g~~~g~G~------kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~ 178 (260)
+|. |.+ ++||++||||+ |++++++|.+++ +.+ .++++|.|+|+++||.| .|++.+++++ + +
T Consensus 89 ~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~ 162 (487)
T 2qyv_A 89 NHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-R 162 (487)
T ss_dssp -----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-C
T ss_pred ccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-C
Confidence 675 443 46899999987 378888887775 233 37789999999999987 7999988765 4 3
Q ss_pred CceEEEecccCCCCCcceEee--cc------------cccceeeEEEEEEEc-cCCCcCCC-CCC-cCHHHHHHHHHHHH
Q 024905 179 SEAIFGMHIDVGIPTGSIASI--SG------------PHLAATSVFNVKVEG-RGGHAAMP-HST-IDPILTASSVILAL 241 (260)
Q Consensus 179 ~d~~i~~~~~~~~~~~~~~~~--~g------------~~~~G~~~~~i~v~G-~~~Hs~~p-~~g-~nAi~~~~~~i~~l 241 (260)
+|+++..++.+ .+.+... .+ ..++| .+++|+++| +++|||.| +.| .||+..+++++..|
T Consensus 163 ~d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l 238 (487)
T 2qyv_A 163 SEILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAEL 238 (487)
T ss_dssp CSEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHH
Confidence 78888765432 2333221 11 13455 889999999 89999976 777 69999999999999
Q ss_pred HHH
Q 024905 242 QQL 244 (260)
Q Consensus 242 ~~~ 244 (260)
+.+
T Consensus 239 ~~~ 241 (487)
T 2qyv_A 239 QQN 241 (487)
T ss_dssp HHH
T ss_pred hhc
Confidence 876
No 25
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.96 E-value=5.6e-29 Score=226.62 Aligned_cols=202 Identities=15% Similarity=0.157 Sum_probs=160.4
Q ss_pred HHHHhhHHHHHHHHHHHHhCCCCC----------cchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-C-CcEEEE
Q 024905 31 ISAQQDKDWLVSVRRQIHENPELL----------FEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVL 98 (260)
Q Consensus 31 ~~i~~~~~~~~~~~~~l~~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~-~~~i~l 98 (260)
++++...+++++++++|++|||++ ++|.++++||.++|+++|++++. +..+|+++++++. + +|+|+|
T Consensus 2 ~~~~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~-~~~gnv~a~~~g~~~~~~~i~l 80 (423)
T 1z2l_A 2 SLITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRF-DEVGNLYGRLNGTEYPQEVVLS 80 (423)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEE-CTTSCEEEEECCSSEEEEEEEE
T ss_pred CcccccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEE-ecCCcEEEEEcCCCCCCCEEEE
Confidence 345666788999999999999988 67999999999999999999876 4556999999754 3 389999
Q ss_pred EeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC------CChHHHHH
Q 024905 99 RADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIK 172 (260)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~~ 172 (260)
.|||||||.+ |+ .++|++++++|++++.|++.+.+++++|.|+|+++||.+ .|++.+..
T Consensus 81 ~~H~D~Vp~~------------g~---~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 81 GSHIDTVVNG------------GN---LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp EEECCCCTTB------------CS---STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTT
T ss_pred EEecCCCCCC------------Cc---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHc
Confidence 9999999964 11 366889999999999999988789999999999999974 27887765
Q ss_pred ----cC--------------------CC---------CCCceEEEecccCC---CCCc-ceEeecccccceeeEEEEEEE
Q 024905 173 ----EG--------------------AL---------GDSEAIFGMHIDVG---IPTG-SIASISGPHLAATSVFNVKVE 215 (260)
Q Consensus 173 ----~g--------------------~~---------~~~d~~i~~~~~~~---~~~~-~~~~~~g~~~~G~~~~~i~v~ 215 (260)
++ +. .++|+++.+|..++ ++++ ...+ ...++|..+++|+++
T Consensus 146 ~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~--~~~~~g~~~~~i~v~ 223 (423)
T 1z2l_A 146 LANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGV--VNAIVGQRRYTVTLN 223 (423)
T ss_dssp CCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEE--EEEECEEEEEEEEEE
T ss_pred CCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEE--EeeEecceEEEEEEE
Confidence 22 11 13567888876554 1122 1111 124689999999999
Q ss_pred ccCCCcC-CCC-CCcCHHHHHHHHHHHHHHHHhhcCCC
Q 024905 216 GRGGHAA-MPH-STIDPILTASSVILALQQLISREADP 251 (260)
Q Consensus 216 G~~~Hs~-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~p 251 (260)
|+++||| .|+ .|+|||..+++++..|+++..+ .+|
T Consensus 224 G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~ 260 (423)
T 1z2l_A 224 GESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD 260 (423)
T ss_dssp CCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT
T ss_pred eEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC
Confidence 9999999 796 8999999999999999988765 444
No 26
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.96 E-value=1.3e-28 Score=202.52 Aligned_cols=171 Identities=15% Similarity=0.174 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeEee---cCCceEEEEEcCC-C-CcEEEEEeccCCCCCCC
Q 024905 37 KDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYP---VAKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~---~~~~nlia~~~~~-~-~~~i~l~~H~DtVp~~~ 109 (260)
.+++++++++|++|||+|+ +|.++++|+.++|+++|++++.. .+++|+++++++. + +|+|+|+||+||||+++
T Consensus 9 ~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~ 88 (198)
T 1q7l_A 9 EHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK 88 (198)
T ss_dssp CCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc
Confidence 3567899999999999998 78999999999999999988764 2567999999754 3 48999999999999864
Q ss_pred CCCCc---cccc--cCCccccCC---CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC--CChHHHHHcCCC--C
Q 024905 110 LVEWE---HKSK--IDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGAL--G 177 (260)
Q Consensus 110 ~~~w~---~~~~--~~g~~~g~G---~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~g~~--~ 177 (260)
..|. |.+. +||++|||| +|++++++|.|++.|++.+.+++++|.|+|+++||.| .|++++++++.+ .
T Consensus 89 -~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 167 (198)
T 1q7l_A 89 -EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHAL 167 (198)
T ss_dssp -GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTT
T ss_pred -ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccC
Confidence 3574 5443 589999998 3899999999999999988778999999999999986 799999876422 1
Q ss_pred CCceEEEecccCCCCCcceEeecccccceeeEEEE
Q 024905 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNV 212 (260)
Q Consensus 178 ~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i 212 (260)
++|+++ +...++|++...+. .+++|..|++|
T Consensus 168 ~~~~~i--d~g~~ept~~~~v~--~~~kG~~~~~v 198 (198)
T 1q7l_A 168 RAGFAL--DEGIANPTDAFTVF--YSERSPWWVRV 198 (198)
T ss_dssp CEEEEE--ECCCCCSSSSEEEE--ECCSSCGGGCC
T ss_pred CcCEEE--ecCccCCCCCceEE--EEccEEEEEEC
Confidence 345555 32346777643332 34788877653
No 27
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.96 E-value=5.9e-28 Score=207.58 Aligned_cols=151 Identities=21% Similarity=0.313 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee--cCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCc
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (260)
++++++++++|++|||+|++|.++++||.++|+++||+++.. .+++|+++++ +.++|+|+|+||+||||+++...|.
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GTSEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CCCCCEEEEEeeecccCCCCccccc
Confidence 468899999999999999999999999999999999988753 3578999998 3446899999999999998777885
Q ss_pred ---ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCC--ChHHHHHcC--CCCCCceEE
Q 024905 115 ---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGA--GAFHMIKEG--ALGDSEAIF 183 (260)
Q Consensus 115 ---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~g--~~~~~d~~i 183 (260)
|.+ +++|++||||+ |+++++++.|++.|++.+.+++++|.|+|+++||.|. |++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 443 56999999985 7999999999999988777788999999999999884 999988641 123579999
Q ss_pred Eeccc
Q 024905 184 GMHID 188 (260)
Q Consensus 184 ~~~~~ 188 (260)
+.++.
T Consensus 164 ~~Ept 168 (269)
T 4h2k_A 164 VGEPS 168 (269)
T ss_dssp ECCCC
T ss_pred EECCC
Confidence 87653
No 28
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.96 E-value=2.9e-28 Score=225.20 Aligned_cols=194 Identities=17% Similarity=0.140 Sum_probs=156.4
Q ss_pred hHHHHHHHHHHH-HhCCCC-----------------CcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-CCcEE
Q 024905 36 DKDWLVSVRRQI-HENPEL-----------------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVV 96 (260)
Q Consensus 36 ~~~~~~~~~~~l-~~ips~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~~~~i 96 (260)
..+++++++++| ++|||+ +++|.++++||.++|+++|++++. +..+|+++++++. ++|+|
T Consensus 30 ~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~-d~~gnvia~~~g~~~~~~i 108 (474)
T 2v8h_A 30 ASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKV-DKIGNMFAVYPGKNGGKPT 108 (474)
T ss_dssp CTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEE-BTTCCEEEEECCSSCCSCE
T ss_pred CHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEE-ecCceEEEEECCCCCCCeE
Confidence 457899999999 999987 367899999999999999998876 4567999999754 45799
Q ss_pred EEEeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC------CChHHH
Q 024905 97 VLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHM 170 (260)
Q Consensus 97 ~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g------~G~~~~ 170 (260)
+|+|||||||+++ | | ++|++++++|+|++.|++.+.+++++|.|+|++|||.+ .|++.+
T Consensus 109 ~l~~H~DtVp~~g---~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l 173 (474)
T 2v8h_A 109 ATGSHLDTQPEAG---K----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVW 173 (474)
T ss_dssp EEEECCCCCSSBC---S----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHH
T ss_pred EEEEecccCCCCC---C----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHH
Confidence 9999999999752 3 2 78899999999999999988888999999999999973 378877
Q ss_pred HH---------------------------cCCC---------CCCceEEEecccCCCCCc----ceEeecccccceeeEE
Q 024905 171 IK---------------------------EGAL---------GDSEAIFGMHIDVGIPTG----SIASISGPHLAATSVF 210 (260)
Q Consensus 171 ~~---------------------------~g~~---------~~~d~~i~~~~~~~~~~~----~~~~~~g~~~~G~~~~ 210 (260)
.+ .|+. .++|+.+.+|..++...+ ...+ ..+++|..++
T Consensus 174 ~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i--~~~~~G~~~~ 251 (474)
T 2v8h_A 174 SHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGI--VTGVQAYNWQ 251 (474)
T ss_dssp TTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEE--EEEECEEEEE
T ss_pred HhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCccee--EEeecceEEE
Confidence 53 1221 246788888865542111 1111 1235899999
Q ss_pred EEEEEccCCCcC-CCC-CCcCHHHHHHHHHHHHHHHHhh
Q 024905 211 NVKVEGRGGHAA-MPH-STIDPILTASSVILALQQLISR 247 (260)
Q Consensus 211 ~i~v~G~~~Hs~-~p~-~g~nAi~~~~~~i~~l~~~~~~ 247 (260)
+|+++|+++||| .|+ .|+|||..+++++..|+.+..+
T Consensus 252 ~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~ 290 (474)
T 2v8h_A 252 KVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQR 290 (474)
T ss_dssp EEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999 697 7999999999999999987765
No 29
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.96 E-value=3.1e-27 Score=214.29 Aligned_cols=192 Identities=19% Similarity=0.262 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-C-CcEEEEEeccCC
Q 024905 37 KDWLVSVRRQIHENPEL----------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVLRADMDA 104 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~-~~~i~l~~H~Dt 104 (260)
.+++++++++|++|||+ |++|.++++||.++|+++|++++. +..+|+++++++. + +|+|+|.+|||+
T Consensus 4 ~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~-d~~gnv~a~~~g~~~~~~~i~l~aH~D~ 82 (408)
T 3n5f_A 4 GERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE-DAAGNLIGRKEGTNPDATVVLVGSHLDS 82 (408)
T ss_dssp HHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEE-CTTCCEEEEECCSSTTSCEEEEEEESCC
T ss_pred HHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEE-cCCCCEEEEecCCCCCCCEEEEEecCCC
Confidence 46788999999999993 689999999999999999999886 4567999999765 3 699999999999
Q ss_pred CCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC------CChHHHHH------
Q 024905 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIK------ 172 (260)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~~------ 172 (260)
||.+ | ..++|++++++|.+++.|++.+.+++++|.|+|+++||.+ .|++.++.
T Consensus 83 v~~~------------g---~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~ 147 (408)
T 3n5f_A 83 VYNG------------G---CFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEA 147 (408)
T ss_dssp CTTB------------C---SSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGG
T ss_pred CCCC------------C---ccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHH
Confidence 9963 2 1266889999999999999988789999999999999963 38888861
Q ss_pred ------c-----------CC----C-----C--CCceEEEecccCC---CCCc-ceEeecccccceeeEEEEEEEccCCC
Q 024905 173 ------E-----------GA----L-----G--DSEAIFGMHIDVG---IPTG-SIASISGPHLAATSVFNVKVEGRGGH 220 (260)
Q Consensus 173 ------~-----------g~----~-----~--~~d~~i~~~~~~~---~~~~-~~~~~~g~~~~G~~~~~i~v~G~~~H 220 (260)
+ |+ + + ++|+++.+|++++ ++.+ .+.+. ..++|..+++|+++|+++|
T Consensus 148 ~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~--~~~~g~~~~~i~v~G~~~H 225 (408)
T 3n5f_A 148 LECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIV--TGIAGLIWVKFTIEGKAEH 225 (408)
T ss_dssp GSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEE--EEECEEEEEEEEEECCCEE
T ss_pred hhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEE--EEeccceEEEEEEEEEcCc
Confidence 1 21 1 2 4678888887654 1111 22222 2378999999999999999
Q ss_pred c-CCC-CCCcCHHHHHHHHHHHHHHHHh
Q 024905 221 A-AMP-HSTIDPILTASSVILALQQLIS 246 (260)
Q Consensus 221 s-~~p-~~g~nAi~~~~~~i~~l~~~~~ 246 (260)
+ +.| +.|+|||..+++++..|+.+..
T Consensus 226 ags~P~~~g~nAi~~aa~~i~~l~~~~~ 253 (408)
T 3n5f_A 226 AGATPMSLRRDPMAAAAQIIIVIEEEAR 253 (408)
T ss_dssp TTTSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccCHHHHHHHHHHHHHHHHH
Confidence 9 489 5899999999999999998873
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.95 E-value=2.3e-27 Score=203.77 Aligned_cols=150 Identities=17% Similarity=0.254 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee--cCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCc-
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE- 114 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~- 114 (260)
+++++++++|++|||+|++|.++++||.++|+++|++++.. ++++|++++++ .++|+|+|+||+||||+++...|.
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRG-TQSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEEC-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeC-CCCCeEEEEccccccCCCCcccCCC
Confidence 57889999999999999999999999999999999987652 35689999983 446899999999999998877885
Q ss_pred --ccc-ccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCC--ChHHHHHcC--CCCCCceEEE
Q 024905 115 --HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGA--GAFHMIKEG--ALGDSEAIFG 184 (260)
Q Consensus 115 --~~~-~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~g--~~~~~d~~i~ 184 (260)
|.+ +++|++||||+ |+++++++.|++.|++.+.+++++|.|+|+++||.|. |++++++.. ...++|++|+
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 543 67999999985 7999999999999988777788999999999999884 999988642 1235799998
Q ss_pred eccc
Q 024905 185 MHID 188 (260)
Q Consensus 185 ~~~~ 188 (260)
.++.
T Consensus 165 ~ept 168 (268)
T 3t68_A 165 GEPS 168 (268)
T ss_dssp CSCC
T ss_pred eCCC
Confidence 7653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.85 E-value=7.8e-22 Score=174.77 Aligned_cols=162 Identities=12% Similarity=0.116 Sum_probs=121.3
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-CCcEEEEEeccCCCCCC-------------
Q 024905 43 VRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALPLQ------------- 108 (260)
Q Consensus 43 ~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~~~~i~l~~H~DtVp~~------------- 108 (260)
++++|+++||+|++|.++++|+.++|+++|++++. +..+|+++.+++. ++|+|+|.||+|+||..
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYT-DVLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEE-CTTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-eCCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 57899999999999999999999999999998876 4678999998764 35899999999999920
Q ss_pred CCCCCccc---c------------------------------------------------cc-C-------------Ccc
Q 024905 109 ELVEWEHK---S------------------------------------------------KI-D-------------GKM 123 (260)
Q Consensus 109 ~~~~w~~~---~------------------------------------------------~~-~-------------g~~ 123 (260)
....|..+ . ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 01134322 1 11 4 889
Q ss_pred ccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecccCCCCCcceEeec
Q 024905 124 HACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASIS 200 (260)
Q Consensus 124 ~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~ 200 (260)
|||. +|+++++++.+++.|+ ++++++.++|+++||.| .|++++.+. . .+|++|+.++.. .
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~-----~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ--L-KPTCAIVVETTT-----A----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH--H-CCSEEEEEEEEE-----E-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc--c-CCCEEEEEeccc-----C-----
Confidence 9983 3899999999998876 47889999999999988 799888764 2 468888764311 0
Q ss_pred ccccceeeEEEEEEEccCCCcCCCCCCcCHHHH
Q 024905 201 GPHLAATSVFNVKVEGRGGHAAMPHSTIDPILT 233 (260)
Q Consensus 201 g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~ 233 (260)
+ ++.|+++|++.|+.|.|++..
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~ 246 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAIT 246 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEEC
T ss_pred -----C------CCCCCccccCCcccCCCcEEE
Confidence 0 356888898888888776543
No 32
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.82 E-value=7.7e-20 Score=162.53 Aligned_cols=145 Identities=13% Similarity=0.148 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-CCcEEEEEeccCCC----------
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDAL---------- 105 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~~~~i~l~~H~DtV---------- 105 (260)
++++++++++|++|||+|++|.++++|+.++|+++|++++. +..+|+++++++. ++|+|+|.||+|||
T Consensus 5 ~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-d~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~ 83 (349)
T 2gre_A 5 TKETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKR-NNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPD 83 (349)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEE-CSSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEE-ecCCcEEEEecCCCCCceEEEEecccccceeEEEECCC
Confidence 46789999999999999999999999999999999999876 4678999999764 35899999999999
Q ss_pred ------CCCCCCCCcccc--------------------------------------------------------------
Q 024905 106 ------PLQELVEWEHKS-------------------------------------------------------------- 117 (260)
Q Consensus 106 ------p~~~~~~w~~~~-------------------------------------------------------------- 117 (260)
|.+.....++..
T Consensus 84 G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~g 163 (349)
T 2gre_A 84 GRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVG 163 (349)
T ss_dssp SCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTT
T ss_pred CeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCC
Confidence 433211001100
Q ss_pred -----------ccCCccccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEE
Q 024905 118 -----------KIDGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIF 183 (260)
Q Consensus 118 -----------~~~g~~~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i 183 (260)
..+|++|||. +|+++++++.+++.|++.+.+++++|.++|+++||.| .|++.+ . .++|++|
T Consensus 164 d~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~--~---~~~~~~i 238 (349)
T 2gre_A 164 DFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI--P---EETVEYL 238 (349)
T ss_dssp CEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC--C---TTEEEEE
T ss_pred CEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc--c---cCCCEEE
Confidence 0247788764 5899999999999999877778899999999999988 788765 1 2478888
Q ss_pred Eecc
Q 024905 184 GMHI 187 (260)
Q Consensus 184 ~~~~ 187 (260)
++++
T Consensus 239 ~~D~ 242 (349)
T 2gre_A 239 AVDM 242 (349)
T ss_dssp EECC
T ss_pred EEec
Confidence 8765
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.79 E-value=7.8e-19 Score=157.37 Aligned_cols=144 Identities=10% Similarity=0.161 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC-CCcEEEEEeccCCCCC---------
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALPL--------- 107 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~-~~~~i~l~~H~DtVp~--------- 107 (260)
+++++++++|+++||+|++|.++++||.++|+++|++++. +..+|+++++++. +.|+|+|.||+||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTT-DRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEE-CTTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-cCCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 4678999999999999999999999999999999999876 4678999988764 4589999999999992
Q ss_pred ------------------------CCC-----CCCc----ccc----------------------------c--------
Q 024905 108 ------------------------QEL-----VEWE----HKS----------------------------K-------- 118 (260)
Q Consensus 108 ------------------------~~~-----~~w~----~~~----------------------------~-------- 118 (260)
.+. -.|. +.+ +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 110 0021 100 0
Q ss_pred --------cCCccccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecc
Q 024905 119 --------IDGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (260)
Q Consensus 119 --------~~g~~~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~ 187 (260)
++|++|||+ +|+++++++.+++.|++.+ ++++|.|+|+++||.| .|++.+... + .+|++|++++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 167899886 4899999999999998764 6789999999999988 788887542 2 3688888765
No 34
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.79 E-value=3.2e-19 Score=154.19 Aligned_cols=137 Identities=13% Similarity=0.126 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHhCCCCCc--------chHHHHHHHHHHHHhCCCCeEeecC------CceEEEEEcCC-CCcEEEEEec
Q 024905 37 KDWLVSVRRQIHENPELLF--------EEHNTSALIRRELDKLGIPYAYPVA------KTGIVAQIGSG-SRPVVVLRAD 101 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nlia~~~~~-~~~~i~l~~H 101 (260)
.+++++++++|++|||+++ +|.++++||.++|+++|++++.... .+|+++++++. ++++|+|.||
T Consensus 6 ~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH 85 (284)
T 1tkj_A 6 LANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAH 85 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEee
Confidence 4678889999999998886 6889999999999999998876321 46999999765 4589999999
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCC---CC
Q 024905 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGA---LG 177 (260)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~---~~ 177 (260)
+|+||.+. | +.|+|++++++|.+++.|++.+.+++++|.|+|+++||.| .|+++++++-. ..
T Consensus 86 ~D~v~~g~-----------G---a~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~ 151 (284)
T 1tkj_A 86 LDSVSSGA-----------G---INDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRS 151 (284)
T ss_dssp CCCCTTSC-----------C---TTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHT
T ss_pred cCCCCCCC-----------C---CccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccchhh
Confidence 99999631 1 3467899999999999999887788999999999999998 79999987622 13
Q ss_pred CCceEEEecc
Q 024905 178 DSEAIFGMHI 187 (260)
Q Consensus 178 ~~d~~i~~~~ 187 (260)
+++++|+++.
T Consensus 152 ~~~~~i~~D~ 161 (284)
T 1tkj_A 152 KLAGYLNFDM 161 (284)
T ss_dssp TEEEEEEECC
T ss_pred cEEEEEEecC
Confidence 4567777653
No 35
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.79 E-value=5.9e-19 Score=155.66 Aligned_cols=139 Identities=19% Similarity=0.265 Sum_probs=112.4
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCC-------------
Q 024905 40 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP------------- 106 (260)
Q Consensus 40 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp------------- 106 (260)
+++++++|+++||+|++|.++++||.++|+++|+ ++. +..+|+++.++++ .|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 5788999999999999999999999999999999 665 6789999998763 58999999999994
Q ss_pred ---CCCCCCC--------------------------------------------------------------------cc
Q 024905 107 ---LQELVEW--------------------------------------------------------------------EH 115 (260)
Q Consensus 107 ---~~~~~~w--------------------------------------------------------------------~~ 115 (260)
.+.. .| +|
T Consensus 81 ~~~~Gg~-~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~ 159 (332)
T 2wyr_A 81 FRKVGGI-DDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHF 159 (332)
T ss_dssp EEEESCC-CGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCC
T ss_pred EEecCCc-ChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcccc
Confidence 3321 00 01
Q ss_pred ccccCCccccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecc
Q 024905 116 KSKIDGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (260)
Q Consensus 116 ~~~~~g~~~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~ 187 (260)
....++++|||. +|+++++++.+++.|++.+ +++++.++|+++||.| .|++++.+. + .+|++|++++
T Consensus 160 ~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~ 229 (332)
T 2wyr_A 160 SVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDS 229 (332)
T ss_dssp EEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECC
T ss_pred EEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEec
Confidence 112468899983 4899999999999998764 6789999999999988 788888642 2 4789998765
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.75 E-value=6.9e-18 Score=146.86 Aligned_cols=142 Identities=12% Similarity=0.132 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCC--C-eEee------cCCceEEEEEcCC--CCcEEEEEecc
Q 024905 37 KDWLVSVRRQIHENPE---LLFEEHNTSALIRRELDKLGI--P-YAYP------VAKTGIVAQIGSG--SRPVVVLRADM 102 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips---~s~~e~~~~~~l~~~l~~~G~--~-~~~~------~~~~nlia~~~~~--~~~~i~l~~H~ 102 (260)
.+++++++++|+++|+ .|+.|.++++||.++|+++|+ + ++.. ...+|+++++++. +.+.|+|.||+
T Consensus 19 ~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~ 98 (299)
T 1rtq_A 19 ASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHL 98 (299)
T ss_dssp HHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEecc
Confidence 4789999999999984 456788999999999999874 3 3321 1248999999764 25789999999
Q ss_pred CCCCCCCCCCCccccccCCccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCC--C
Q 024905 103 DALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGA--L 176 (260)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~--~ 176 (260)
||||. .|.. +++||+|+ |++++++|.+++.|++.+.+++++|.|+++++||.| .|+++++++-. .
T Consensus 99 D~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~ 169 (299)
T 1rtq_A 99 DSTIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQYKSEG 169 (299)
T ss_dssp CCCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHHTT
T ss_pred ccCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHhhhhcc
Confidence 99983 4542 56788775 799999999999999887778999999999999998 79998876521 2
Q ss_pred CCCceEEEecc
Q 024905 177 GDSEAIFGMHI 187 (260)
Q Consensus 177 ~~~d~~i~~~~ 187 (260)
.+++++|.++.
T Consensus 170 ~~~~~~i~~D~ 180 (299)
T 1rtq_A 170 KNVVSALQLDM 180 (299)
T ss_dssp CEEEEEEECSC
T ss_pred ccEEEEEEecC
Confidence 23456666553
No 37
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.73 E-value=1.6e-17 Score=147.65 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=109.4
Q ss_pred HHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCC------------
Q 024905 40 LVSVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP------------ 106 (260)
Q Consensus 40 ~~~~~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp------------ 106 (260)
+++++++|+++||+|++| .++++++.++|+++|++++. +..+|+++.+++. +|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~-d~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKV-DKLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEE-CTTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEE-cCCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578899999999999999 99999999999999998876 5778999998765 58999999999995
Q ss_pred ----CCCCCCCc-c----------------------------------------------------------c-------
Q 024905 107 ----LQELVEWE-H----------------------------------------------------------K------- 116 (260)
Q Consensus 107 ----~~~~~~w~-~----------------------------------------------------------~------- 116 (260)
.+.. .|. + .
T Consensus 86 ~~~~~Gg~-~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~ 164 (353)
T 1y0y_A 86 RVAPIGGV-DPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITW 164 (353)
T ss_dssp EEEEESSC-CGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred EEEEeCCc-chhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEe
Confidence 3321 010 0 0
Q ss_pred -----cccCCccccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEeccc
Q 024905 117 -----SKIDGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHID 188 (260)
Q Consensus 117 -----~~~~g~~~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~~ 188 (260)
...++++|||. +|+++++++.+++.|++ +++++.++|+++||.| .|++.+... + .+|++|++++.
T Consensus 165 ~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~--~-~~~~~i~~d~~ 237 (353)
T 1y0y_A 165 DGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG--I-EPDYGFAIDVT 237 (353)
T ss_dssp CCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEEE
T ss_pred ccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc--c-CCCEEEEEecc
Confidence 00135677663 48999999999998865 6789999999999988 788888643 2 46888987753
No 38
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.70 E-value=9.3e-20 Score=158.57 Aligned_cols=186 Identities=13% Similarity=0.074 Sum_probs=108.0
Q ss_pred HHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCCCCCCCCCcccccc
Q 024905 41 VSVRRQIHENPELLFEEH-NTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKI 119 (260)
Q Consensus 41 ~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~ 119 (260)
+++|++|++|||+|++|. ++++||.++|+++|+++++ +..+|++|+++++ +|+|+|.||+||||...... ..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~-D~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKV-DKLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEE-CTTCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEE-eCCCeEEEEECCC-CceEEEEeccccCCCcCCee-----ec
Confidence 478999999999999885 6899999999999999886 5778999999865 58999999999999643211 23
Q ss_pred CCccccC--CCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecccCCCCCcce
Q 024905 120 DGKMHAC--GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSI 196 (260)
Q Consensus 120 ~g~~~g~--G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~ 196 (260)
+|.++++ |.+.+.++...++..+.+.+ .+...+.++++.+||.+ .+.+.+..+....+..+... ++....
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~------~~~~~~ 157 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSK------EEAEEM 157 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSH------HHHHHT
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccch------hhhhcc
Confidence 5555543 23222222222222222222 34567778889999977 55555443322211111110 000000
Q ss_pred EeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHH
Q 024905 197 ASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ 242 (260)
Q Consensus 197 ~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~ 242 (260)
... ....+......++.+...|++.+..+.+++..+..++.++.
T Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 201 (354)
T 2wzn_A 158 GFR--VGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLG 201 (354)
T ss_dssp TCC--TTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCC
T ss_pred ccc--cceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHH
Confidence 011 12335555667777888888776555555555555555443
No 39
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.69 E-value=1.1e-15 Score=133.34 Aligned_cols=143 Identities=17% Similarity=0.091 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHhCC---CCCcchHHHHHHHHHHHHhCCCCeEeec-----------CCceEEEEEcCCCCcEEEEEeccC
Q 024905 38 DWLVSVRRQIHENP---ELLFEEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSGSRPVVVLRADMD 103 (260)
Q Consensus 38 ~~~~~~~~~l~~ip---s~s~~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nlia~~~~~~~~~i~l~~H~D 103 (260)
+.+.+.+++|+++. ..|..+.++++||.++|+++|++++.+. ...|+++++++.+.+.|+|.||+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 45566666666653 3356789999999999999999886521 147999999876668999999999
Q ss_pred CCCCCCCCCCccccccCCccccCC---CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC--------------CC
Q 024905 104 ALPLQELVEWEHKSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--------------AG 166 (260)
Q Consensus 104 tVp~~~~~~w~~~~~~~g~~~g~G---~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g--------------~G 166 (260)
+||.++. .|+. .+++++| +| ++++++++|.+++.|++.+ ++++|.|+++++||.| .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997642 2332 3456666 44 4789999999999999874 7899999999999986 48
Q ss_pred hHHHHHcCCC--CCCceEEEec
Q 024905 167 AFHMIKEGAL--GDSEAIFGMH 186 (260)
Q Consensus 167 ~~~~~~~g~~--~~~d~~i~~~ 186 (260)
++++.++-.. .++.++|.++
T Consensus 179 S~~~~~~~~~~~~~~~~~inlD 200 (309)
T 3tc8_A 179 TQFWAKNPHVPNYTAEYGILLD 200 (309)
T ss_dssp HHHHHHSCSSTTCCCSEEEEEE
T ss_pred HHHHHhCCCccccceEEEEEec
Confidence 9999875322 2455666654
No 40
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.68 E-value=2.4e-16 Score=139.63 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCCCC---------
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQ--------- 108 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp~~--------- 108 (260)
.++++++++|+++||+|++|.++++|+.++|+++|++++. +..+|+++.+++.+.|.|+|.||+|||+..
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKT-TRHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEE-CTTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEE-ecCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 3567899999999999999999999999999999998876 567899999876445899999999999520
Q ss_pred ---CCCCCcccc-----------------------------------------------------------------ccC
Q 024905 109 ---ELVEWEHKS-----------------------------------------------------------------KID 120 (260)
Q Consensus 109 ---~~~~w~~~~-----------------------------------------------------------------~~~ 120 (260)
....|.+.. ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 001232100 002
Q ss_pred CccccCCC--cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecc
Q 024905 121 GKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (260)
Q Consensus 121 g~~~g~G~--kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~ 187 (260)
|.++|++. |.++++++.+++.+++.+ +++++.++|+++||.| .|++.... . + .+|++++++.
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~-~-i-~~~~~i~~D~ 228 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY-E-I-NPDAAIVMDV 228 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC-C-C-CCSEEEEEEE
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc-c-c-CCCEEEEeec
Confidence 45777764 688999999999987644 6689999999999998 67765432 1 2 3578887765
No 41
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.67 E-value=5.3e-16 Score=137.43 Aligned_cols=140 Identities=13% Similarity=0.219 Sum_probs=107.4
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCCC--------C-----
Q 024905 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL--------Q----- 108 (260)
Q Consensus 42 ~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp~--------~----- 108 (260)
+++++|+++||+|++|.++++|+.++|+++|++++. +..+|+++++++.+.|+|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~-d~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEE-CTTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-ecCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 689999999999999999999999999999999875 56789999986544589999999999961 0
Q ss_pred CCCCCcc---------------------------------------------------------------ccccCCcccc
Q 024905 109 ELVEWEH---------------------------------------------------------------KSKIDGKMHA 125 (260)
Q Consensus 109 ~~~~w~~---------------------------------------------------------------~~~~~g~~~g 125 (260)
....|.+ ....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0001110 0013577888
Q ss_pred CCC--cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHcCCCCCCceEEEecc
Q 024905 126 CGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (260)
Q Consensus 126 ~G~--kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~g~~~~~d~~i~~~~ 187 (260)
+++ |.++++++.+++.+++.. ++.++.++++++||.| .|++..... + .+|++++++.
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~ 225 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDT 225 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECC
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEec
Confidence 764 789999999999887643 6689999999999988 677665432 2 3578888765
No 42
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.65 E-value=3.3e-15 Score=130.60 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHhCCCC---CcchHHHHHHHHHHHHhCCCCeEeec-----------CCceEEEEEcCCCCcEEEEEeccC
Q 024905 38 DWLVSVRRQIHENPEL---LFEEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSGSRPVVVLRADMD 103 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~---s~~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nlia~~~~~~~~~i~l~~H~D 103 (260)
+++++.+++|+++++. |..+.++++||.++|+++|++++... ...||+|++++.+.+.|+|.||+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 5677778888887642 45789999999999999999886521 137999999876568999999999
Q ss_pred CCCCCCCCCCccccccCCccccCC---CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC---------------C
Q 024905 104 ALPLQELVEWEHKSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG---------------A 165 (260)
Q Consensus 104 tVp~~~~~~w~~~~~~~g~~~g~G---~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g---------------~ 165 (260)
+||.++.. |+. ..++.+ .+| ++++++++|.+++.|++.+ ++++|.|+++++||.| .
T Consensus 107 sv~~~~~~--p~~-~~~~~~-~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADND--PDP-KNHHTP-ILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCCC--ccc-ccCCcc-cCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 99975421 221 223333 344 4799999999999998864 8899999999999976 4
Q ss_pred ChHHHHHcCCC--CCCceEEEec
Q 024905 166 GAFHMIKEGAL--GDSEAIFGMH 186 (260)
Q Consensus 166 G~~~~~~~g~~--~~~d~~i~~~ 186 (260)
|++++.++-.. .++.++|.++
T Consensus 181 GS~~~~~~~~~~~~~~~~~inlD 203 (314)
T 3gux_A 181 GSQYWARTPHVQNYNARYGILLD 203 (314)
T ss_dssp HHHHHHHSCSSTTCCCSEEEEEE
T ss_pred hHHHHHhCCcccccceeEEEEEe
Confidence 88999875322 2455666654
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.63 E-value=1.9e-15 Score=133.16 Aligned_cols=127 Identities=13% Similarity=0.216 Sum_probs=98.0
Q ss_pred HHHH-HHHHHHHHhCCCC-CcchHHHHHHHHHHHHh--CCCCeEeec----------CCceEEEEEcCCCCcEEEEEecc
Q 024905 37 KDWL-VSVRRQIHENPEL-LFEEHNTSALIRRELDK--LGIPYAYPV----------AKTGIVAQIGSGSRPVVVLRADM 102 (260)
Q Consensus 37 ~~~~-~~~~~~l~~ips~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nlia~~~~~~~~~i~l~~H~ 102 (260)
.+.+ .+++++|+..+.+ |..+.++++||.++|++ .|++++... ...|++|++++.+.+.|++.||+
T Consensus 30 ~~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~ 109 (329)
T 2afw_A 30 ISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHY 109 (329)
T ss_dssp HHHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEec
Confidence 4667 7888888655443 33566899999999999 999886531 15899999987656899999999
Q ss_pred CCCCCCCCCCCccccccCCccccCC---CcHHHHHHHHHHHHHHhc--------cCCCCceEEEEeecCCCC--------
Q 024905 103 DALPLQELVEWEHKSKIDGKMHACG---HDVHTTMLLGAAKLIHQR--------KDKLKGTVRILFQPAEEG-------- 163 (260)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~~~g~G---~kg~~a~~l~a~~~L~~~--------~~~~~~~i~~~~~~dEE~-------- 163 (260)
|+||.+ .|. |++ ++| +++|+|++|.+++.|++. +.+++++|.|++..+||.
T Consensus 110 Dsv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~ 179 (329)
T 2afw_A 110 DSKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQD 179 (329)
T ss_dssp CCCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSS
T ss_pred cCCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCc
Confidence 999964 342 333 444 479999999999999875 246889999999999997
Q ss_pred C-CChHHHHHc
Q 024905 164 G-AGAFHMIKE 173 (260)
Q Consensus 164 g-~G~~~~~~~ 173 (260)
| .|+++++++
T Consensus 180 gl~Gs~~~~~~ 190 (329)
T 2afw_A 180 SLYGSRHLAAK 190 (329)
T ss_dssp SCHHHHHHHHH
T ss_pred cchhHHHHHHH
Confidence 6 689888765
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.60 E-value=7e-16 Score=135.49 Aligned_cols=140 Identities=14% Similarity=0.024 Sum_probs=103.8
Q ss_pred hhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecC-------CceEEEEEcCCCCcEEEEEeccCCCC-
Q 024905 35 QDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-------KTGIVAQIGSGSRPVVVLRADMDALP- 106 (260)
Q Consensus 35 ~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~-------~~nlia~~~~~~~~~i~l~~H~DtVp- 106 (260)
...+++++++++|+++||+|++|.++++|+.++|+++|++++. +. .+|+++.+++ + |+++|.||+|||+
T Consensus 14 ~~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~-d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~ 90 (321)
T 3cpx_A 14 NLYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSY-QPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGF 90 (321)
T ss_dssp GGGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSS-CCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEE
T ss_pred hHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEE-ccccccccCCccEEEEecC-C-ceEEEEecCCcCCe
Confidence 4456789999999999999999999999999999999998765 33 6899999876 4 8899999999994
Q ss_pred ----------CCCCCCCc-----ccc-------------------------------------ccCCccccCC--CcHHH
Q 024905 107 ----------LQELVEWE-----HKS-------------------------------------KIDGKMHACG--HDVHT 132 (260)
Q Consensus 107 ----------~~~~~~w~-----~~~-------------------------------------~~~g~~~g~G--~kg~~ 132 (260)
.+....|. ... ..+|+++|++ +|+++
T Consensus 91 ~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~ 170 (321)
T 3cpx_A 91 TVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGV 170 (321)
T ss_dssp EECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHH
T ss_pred EecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHH
Confidence 32211221 000 0025666665 47899
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHH---HcCCCCCCceEEEecc
Q 024905 133 TMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMI---KEGALGDSEAIFGMHI 187 (260)
Q Consensus 133 a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~---~~g~~~~~d~~i~~~~ 187 (260)
++++.+++.++ . +.++|+++||.| .|++... .+. + .+|++++.++
T Consensus 171 aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~-~-~~~~~i~~D~ 219 (321)
T 3cpx_A 171 WTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYET-F-HVKQSLICDI 219 (321)
T ss_dssp HHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHH-H-CCCEEEECCC
T ss_pred HHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccc-c-CCCEEEEEeC
Confidence 99998887653 1 889999999998 7877532 222 2 3688888765
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.48 E-value=7.2e-13 Score=117.62 Aligned_cols=67 Identities=21% Similarity=0.152 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCC--CCcEEEEEeccCCCC
Q 024905 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALP 106 (260)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~--~~~~i~l~~H~DtVp 106 (260)
++++++++|+++||+|++|.++++|+.++|+++|++++. +..+|+++++++. ++|+|+|.||||+|+
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~-D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg 72 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVT-DGLGGIFGIKHSEAVDAPRVLVASHMDEVG 72 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEE-CTTSCEEEEECCCSTTCCEEEEEEECCBCE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEE-CCCCeEEEEECCcCCCCCeEEEEecccccc
Confidence 578999999999999999999999999999999998876 5789999999764 369999999999996
No 46
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=8e-12 Score=108.96 Aligned_cols=145 Identities=16% Similarity=0.148 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhC-CCC--CcchHHHHHHHHHHHHhCCCCeEee-------c----CCceEEEEEcCCCCcEEEEEeccC
Q 024905 38 DWLVSVRRQIHEN-PEL--LFEEHNTSALIRRELDKLGIPYAYP-------V----AKTGIVAQIGSGSRPVVVLRADMD 103 (260)
Q Consensus 38 ~~~~~~~~~l~~i-ps~--s~~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nlia~~~~~~~~~i~l~~H~D 103 (260)
+...+.++.++++ |.+ |....++++||.+.|+++|++++.. . ...|+|+++++...+.|+|.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 4556667777765 333 3456789999999999999988642 1 135999999887668999999999
Q ss_pred CCCCCCCCCCccccccCCccccCCC-cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC---------------CCh
Q 024905 104 ALPLQELVEWEHKSKIDGKMHACGH-DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG---------------AGA 167 (260)
Q Consensus 104 tVp~~~~~~w~~~~~~~g~~~g~G~-kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g---------------~G~ 167 (260)
++|..+....... .+....|... -+|+|++|.+++.|.+. +++.+|.|+|..+||.| .|+
T Consensus 105 s~~~~~~~~~~~~--~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS 180 (309)
T 4fuu_A 105 TRPWADNDADEKN--HHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGS 180 (309)
T ss_dssp CCSCCTTCSSGGG--TTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHH
T ss_pred CCCCCCCcccccc--ccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcch
Confidence 9996542211110 1111123333 47999999999999875 47889999999999987 377
Q ss_pred HHHHHcCCC--CCCceEEEec
Q 024905 168 FHMIKEGAL--GDSEAIFGMH 186 (260)
Q Consensus 168 ~~~~~~g~~--~~~d~~i~~~ 186 (260)
+++.+.... ..+.++|.++
T Consensus 181 ~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 181 QYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp HHHHHSCSSTTCCCSEEEEEC
T ss_pred hHHHhcccccCcceEEEEeee
Confidence 888765221 2455666665
No 47
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.39 E-value=6.1e-12 Score=110.70 Aligned_cols=137 Identities=20% Similarity=0.230 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeEee------c-----CCceEEEEEcCCCCcEEEEEeccCC
Q 024905 38 DWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYP------V-----AKTGIVAQIGSGSRPVVVLRADMDA 104 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~------~-----~~~nlia~~~~~~~~~i~l~~H~Dt 104 (260)
..+.+.+..++ +|.++| ...++++||.+.|+++|++++.+ . ...|+||++++...+.|++.||+|+
T Consensus 38 ~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs 116 (330)
T 4fai_A 38 LHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCC
T ss_pred HHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecc
Confidence 44555566653 676655 56789999999999999988642 1 1359999998776688999999999
Q ss_pred CCCCCCCCCccccccCCccccCC-CcHHHHHHHHHHHHHHhc---cCCCCceEEEEeecCCCCC---------CChHHHH
Q 024905 105 LPLQELVEWEHKSKIDGKMHACG-HDVHTTMLLGAAKLIHQR---KDKLKGTVRILFQPAEEGG---------AGAFHMI 171 (260)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~~~g~G-~kg~~a~~l~a~~~L~~~---~~~~~~~i~~~~~~dEE~g---------~G~~~~~ 171 (260)
++..+. + ..|.. .-+|+|++|.+++.|++. +.+++.+|.|++..+||.| .|++++.
T Consensus 117 ~~~~~~----------~-~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a 185 (330)
T 4fai_A 117 KYMPGV----------E-FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLA 185 (330)
T ss_dssp CCCTTS----------C-CCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHH
T ss_pred cccccC----------C-CCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHH
Confidence 985321 1 12333 347999999999999753 4468899999999999987 3889887
Q ss_pred Hc----CCCCCCceEEEec
Q 024905 172 KE----GALGDSEAIFGMH 186 (260)
Q Consensus 172 ~~----g~~~~~d~~i~~~ 186 (260)
++ +..+++.+.|.++
T Consensus 186 ~~~~~~~~~~~i~~~inlD 204 (330)
T 4fai_A 186 KKWHHEGKLDRIDMLVLLD 204 (330)
T ss_dssp HHHHHTTCSTTEEEEEEEC
T ss_pred hcchhccchhceeEEEEec
Confidence 64 3344566777765
No 48
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.37 E-value=2.8e-12 Score=112.64 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=92.0
Q ss_pred HHHHH-HHHHHHhCCCC--CcchHHHHHHHHHHHHhC--CCCeEeec----------CCceEEEEEcCCCCcEEEEEecc
Q 024905 38 DWLVS-VRRQIHENPEL--LFEEHNTSALIRRELDKL--GIPYAYPV----------AKTGIVAQIGSGSRPVVVLRADM 102 (260)
Q Consensus 38 ~~~~~-~~~~l~~ips~--s~~e~~~~~~l~~~l~~~--G~~~~~~~----------~~~nlia~~~~~~~~~i~l~~H~ 102 (260)
+.+.+ .++.+ -+|.+ |..+.++++||.++|+++ |++++.+. ...|+||++++...+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 34444 44444 23333 446788999999999999 88876531 12799999987656899999999
Q ss_pred CCCCCCCCCCCccccccCCccccCC-CcHHHHHHHHHHHHHHhc-----cCCCCceEEEEeecCCCC--------C-CCh
Q 024905 103 DALPLQELVEWEHKSKIDGKMHACG-HDVHTTMLLGAAKLIHQR-----KDKLKGTVRILFQPAEEG--------G-AGA 167 (260)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~~~g~G-~kg~~a~~l~a~~~L~~~-----~~~~~~~i~~~~~~dEE~--------g-~G~ 167 (260)
|+||..+. +....|.. ..+|++++|.+++.|.+. +.+++.+|.|++..+||. | .|+
T Consensus 118 Dsv~~~~g---------~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS 188 (330)
T 3pb6_X 118 DSKLFPPG---------STPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGS 188 (330)
T ss_dssp CCCCCCTT---------SCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHH
T ss_pred CCCCCCCC---------CcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccH
Confidence 99984211 01112333 358999999999999873 356899999999999998 8 799
Q ss_pred HHHHHc
Q 024905 168 FHMIKE 173 (260)
Q Consensus 168 ~~~~~~ 173 (260)
++++++
T Consensus 189 ~~~a~~ 194 (330)
T 3pb6_X 189 RHLAQL 194 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 49
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.36 E-value=3.7e-12 Score=112.94 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCCC
Q 024905 39 WLVSVRRQIHENPELLFEEH-NTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL 107 (260)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp~ 107 (260)
.+++++++|+++||+|++|. ++++|+.++|+++|++++. +..+|+++++++.+ |+|+|.||||+|+.
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~-D~~GNvi~~~~g~~-~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKV-DKLGNVIAHFKGSS-PRIMVAAHMDKIGV 77 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEE-CTTCCEEEEECCSS-SEEEEECCCCBCEE
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEE-cCCCeEEEEEcCCC-CEEEEEecccccce
Confidence 35789999999999999999 9999999999999998876 57899999997654 99999999999973
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.36 E-value=7.9e-12 Score=109.10 Aligned_cols=121 Identities=16% Similarity=0.206 Sum_probs=90.5
Q ss_pred HHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeEeec-----------CCceEEEEEcCCCCcEEEEEeccCCCCCC
Q 024905 42 SVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSGSRPVVVLRADMDALPLQ 108 (260)
Q Consensus 42 ~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nlia~~~~~~~~~i~l~~H~DtVp~~ 108 (260)
++|..++ +|.+++ ...++++||.++|+++|++++... ...||||++++.+.+.|++.||+|+++..
T Consensus 15 ~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~~~ 93 (312)
T 4f9u_A 15 RTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYFP 93 (312)
T ss_dssp HHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCCCT
T ss_pred HHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCCCC
Confidence 3344443 676655 467899999999999999886421 13599999988766899999999999753
Q ss_pred CCCCCccccccCCccccCCC-cHHHHHHHHHHHHHHhc-----cCCCCceEEEEeecCCCCC---------CChHHHHHc
Q 024905 109 ELVEWEHKSKIDGKMHACGH-DVHTTMLLGAAKLIHQR-----KDKLKGTVRILFQPAEEGG---------AGAFHMIKE 173 (260)
Q Consensus 109 ~~~~w~~~~~~~g~~~g~G~-kg~~a~~l~a~~~L~~~-----~~~~~~~i~~~~~~dEE~g---------~G~~~~~~~ 173 (260)
+. ....|... .+|+|++|.+++.|.+. +.+++.+|.|++..+||.| .|+++++++
T Consensus 94 ~~----------~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~ 163 (312)
T 4f9u_A 94 ND----------PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAK 163 (312)
T ss_dssp TC----------TTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHH
T ss_pred CC----------CCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHH
Confidence 21 11224333 48999999999999753 4568899999999999976 388888764
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.31 E-value=1.3e-11 Score=108.90 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEeccCCCC
Q 024905 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (260)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~DtVp 106 (260)
.+.+++++|+++||+|+.|.++++++.++++++|.+++. +..+|+++++++ ++|+|+|.||||+|.
T Consensus 12 ~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~-D~~Gnvi~~~g~-~~~~v~l~aHmDevG 77 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRI-DGLGNLIVWKGS-GEKKVILDAHIDEIG 77 (343)
T ss_dssp CCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEE-CTTCCEEEEECC-CSSEEEEEEECCBCE
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEECC-CCCEEEEEecccccc
Confidence 467889999999999999999999999999999988876 678999999843 569999999999995
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.90 E-value=5.4e-09 Score=94.79 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=73.5
Q ss_pred HHHHHHHHHHH---h--CCCCeEee----cCCceEEEEEcCC-----CCcEEEEEeccCCCCCCCCCCCccccccCCccc
Q 024905 59 NTSALIRRELD---K--LGIPYAYP----VAKTGIVAQIGSG-----SRPVVVLRADMDALPLQELVEWEHKSKIDGKMH 124 (260)
Q Consensus 59 ~~~~~l~~~l~---~--~G~~~~~~----~~~~nlia~~~~~-----~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~ 124 (260)
+.+++|.++++ + .+++++.. ....|+++++++. +.+.|++.+|+|+|+.+. -
T Consensus 172 ~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~--------------G 237 (421)
T 2ek8_A 172 QEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAP--------------G 237 (421)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCC--------------C
T ss_pred HHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCC--------------C
Confidence 34677888883 2 12222211 1157999999763 458999999999999531 1
Q ss_pred cCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHc
Q 024905 125 ACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKE 173 (260)
Q Consensus 125 g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~ 173 (260)
+.|+++|++++|.+++.|++. +++++|.|+++++||.| .|+++++++
T Consensus 238 a~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 238 ANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred CCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 235679999999999999874 46789999999999998 799998875
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.85 E-value=7.4e-09 Score=94.51 Aligned_cols=102 Identities=23% Similarity=0.311 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhCC-CCeEe--------ecCCceEEEEEcCCC--CcEEEEEeccCCCCCCCCCCCccccccCCccccC
Q 024905 58 HNTSALIRRELDKLG-IPYAY--------PVAKTGIVAQIGSGS--RPVVVLRADMDALPLQELVEWEHKSKIDGKMHAC 126 (260)
Q Consensus 58 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~nlia~~~~~~--~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~ 126 (260)
.+.++.|.+.|+.-. ++++. .....|+++++++.. .+.|++.+|+|+|+.+. | +.
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~-----------G---a~ 268 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEGT-----------G---AI 268 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSSC-----------C---TT
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCCC-----------C---Cc
Confidence 355677777775421 32221 113479999998763 57899999999998531 1 33
Q ss_pred CCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHHHHHc
Q 024905 127 GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKE 173 (260)
Q Consensus 127 G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~ 173 (260)
|.++|++++|.+++.|++.+.+++++|.|+++.+||.| .|+++++++
T Consensus 269 D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~ 316 (444)
T 3iib_A 269 DDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKE 316 (444)
T ss_dssp TTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHh
Confidence 55789999999999999887788999999999999998 799998875
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.47 E-value=2.6e-07 Score=88.47 Aligned_cols=77 Identities=21% Similarity=0.196 Sum_probs=64.4
Q ss_pred CceEEEEEcCC--CCcEEEEEeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHh---ccCCCCceEEE
Q 024905 81 KTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQ---RKDKLKGTVRI 155 (260)
Q Consensus 81 ~~nlia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~---~~~~~~~~i~~ 155 (260)
..||+++++|. +.+.|++.+|+|+++. | |.|...|++++|.+++.|.+ .+.+++++|.|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-------------G---a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-------------G---AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-------------C---TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-------------C---CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 46999999876 3588999999999973 2 33556889999999999976 35679999999
Q ss_pred EeecCCCCC-CChHHHHHc
Q 024905 156 LFQPAEEGG-AGAFHMIKE 173 (260)
Q Consensus 156 ~~~~dEE~g-~G~~~~~~~ 173 (260)
++..+||.| .|+++++++
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEESCGGGTSHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHh
Confidence 999999998 799988764
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.44 E-value=3.2e-07 Score=86.94 Aligned_cols=78 Identities=22% Similarity=0.129 Sum_probs=64.9
Q ss_pred CceEEEEEcCC--CCcEEEEEeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhc----cCCCCceEE
Q 024905 81 KTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQR----KDKLKGTVR 154 (260)
Q Consensus 81 ~~nlia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~----~~~~~~~i~ 154 (260)
..|++++++|. +.+.|++.+|+|++.+| +.|...|++++|.+++.|.+. +.+++++|.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPG----------------AAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCC----------------TTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCC----------------CCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 47999999876 35789999999999532 224467899999999999864 568999999
Q ss_pred EEeecCCCCC-CChHHHHHcC
Q 024905 155 ILFQPAEEGG-AGAFHMIKEG 174 (260)
Q Consensus 155 ~~~~~dEE~g-~G~~~~~~~g 174 (260)
|++..+||.| .|+++++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 9999999999 7999998763
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=93.79 E-value=0.24 Score=44.23 Aligned_cols=81 Identities=15% Similarity=0.134 Sum_probs=55.1
Q ss_pred EEEEE--cCCCCcEEEEEeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCC
Q 024905 84 IVAQI--GSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAE 161 (260)
Q Consensus 84 lia~~--~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dE 161 (260)
-++.+ +|...+.|+|.+|+|+ |. -+.+.-+|+|+++..++.|++. +++.++.|+|.++
T Consensus 168 ~y~e~~ipG~t~~~IllsaH~cH-P~----------------~ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~pg- 227 (435)
T 3k9t_A 168 TYGEYYIRGELEEEILLTTYTCH-PS----------------MCNDNLSGVALITFIAKALSKL--KTKYSYRFLFAPE- 227 (435)
T ss_dssp EEEEEEECCSSSCEEEEEEECCC-CS----------------CTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEECT-
T ss_pred EEEEEEecCCCCCEEEEEEEcCC-CC----------------CCCccchHHHHHHHHHHHHhcC--CCCceEEEEEcCc-
Confidence 34444 6665699999999997 41 1334447899999999999864 4789999999982
Q ss_pred CCCCChHHHHHcCC--CCCCceEEEec
Q 024905 162 EGGAGAFHMIKEGA--LGDSEAIFGMH 186 (260)
Q Consensus 162 E~g~G~~~~~~~g~--~~~~d~~i~~~ 186 (260)
. .|+.+++.+.. .+.+.+.++++
T Consensus 228 ~--iGS~~yl~~~~~~l~~i~a~lnLD 252 (435)
T 3k9t_A 228 T--IGSITWLSRNEDKLKNIKMGLVAT 252 (435)
T ss_dssp T--HHHHHHHHHCGGGGGGEEEEEECC
T ss_pred c--HHHHHHHHhChHhhhceEEEEEEE
Confidence 2 57777776532 22344555544
No 57
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=91.63 E-value=0.11 Score=47.28 Aligned_cols=50 Identities=16% Similarity=0.065 Sum_probs=34.8
Q ss_pred chHHHHHHHHHHHHhCCCCe-----------Ee-ecCCceEEEEEc-CC----CCcEEEEEeccCCCC
Q 024905 56 EEHNTSALIRRELDKLGIPY-----------AY-PVAKTGIVAQIG-SG----SRPVVVLRADMDALP 106 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~~G~~~-----------~~-~~~~~nlia~~~-~~----~~~~i~l~~H~DtVp 106 (260)
-+..+.+++.++|++.||+. +. .+..+|.++.+. ++ .+++ ++.||+|...
T Consensus 34 T~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 34 TEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp SHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 35689999999999999861 11 233466666654 33 2455 9999999983
No 58
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=90.47 E-value=6.9 Score=35.52 Aligned_cols=119 Identities=11% Similarity=0.007 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CCceEEEEEcCC-CCcEEEEEeccCCCCCC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGSG-SRPVVVLRADMDALPLQ 108 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nlia~~~~~-~~~~i~l~~H~DtVp~~ 108 (260)
.-+-+.+.|+|++-|.---.-...+++..+.+++.|++++..+ +.+.+++.=++. ..|+++...+. |.+
T Consensus 166 ~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~~ 242 (491)
T 2hc9_A 166 LSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VPG 242 (491)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CTT
T ss_pred HHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CCC
Confidence 3456788999999886444556788889999999999887632 122222221222 12444433221 211
Q ss_pred CCC-------CCccccccCCc-c-cc---CCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 109 ELV-------EWEHKSKIDGK-M-HA---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 109 ~~~-------~w~~~~~~~g~-~-~g---~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
+.. .-.|++ +|. | -+ .+| .+|.|+.+++++++.+.+ ++.+|..+....|-
T Consensus 243 ~~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 243 STEHIALVGKGVVYDT--GGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp CSCEEEEEEEEEEEEC--CTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEE
T ss_pred CCCcEEEEcCceEecC--CCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 100 111221 110 0 02 233 489999999999998765 67888888887775
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=88.63 E-value=0.8 Score=41.38 Aligned_cols=50 Identities=26% Similarity=0.249 Sum_probs=37.3
Q ss_pred chHHHHHHHHHHHHhCCCCeE--e----------ecC-CceEEEEEcCCC--CcEEEEEeccCCC
Q 024905 56 EEHNTSALIRRELDKLGIPYA--Y----------PVA-KTGIVAQIGSGS--RPVVVLRADMDAL 105 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~~G~~~~--~----------~~~-~~nlia~~~~~~--~~~i~l~~H~DtV 105 (260)
-+..+.+++.++|++.||..- . .+. ..|++|...+++ .+.+++.||+|.+
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 467899999999999999541 1 112 368999876542 3689999999987
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=88.39 E-value=0.14 Score=46.06 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=39.8
Q ss_pred HHHhCCCCCcchHHHHHHHHHHHHhCCCC---------------eEeecCCceEEEEEcCCC----CcEEEEEeccCCC
Q 024905 46 QIHENPELLFEEHNTSALIRRELDKLGIP---------------YAYPVAKTGIVAQIGSGS----RPVVVLRADMDAL 105 (260)
Q Consensus 46 ~l~~ips~s~~e~~~~~~l~~~l~~~G~~---------------~~~~~~~~nlia~~~~~~----~~~i~l~~H~DtV 105 (260)
+++++=.-|.-+..+.+++.++|++.||. +......+|++|...++. .+.+++.||+|.+
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 44444444556778888888888888882 222222379999875532 4789999999998
No 61
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=87.45 E-value=8.6 Score=34.99 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeEeec-------CCc--------------eEEEEEcCC--C
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------AKT--------------GIVAQIGSG--S 92 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~~--------------nlia~~~~~--~ 92 (260)
..+-+.+.|+|++-|.---.-...+++..+.++++ |++++..+ +.+ -+..+|.+. .
T Consensus 179 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 258 (497)
T 3h8g_F 179 IATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKA 258 (497)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 35678899999999875445567888889989988 98887631 111 122233221 1
Q ss_pred CcEEEEEeccCCCCCCCCCCCccccccCCc-c-ccCC---C---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 93 RPVVVLRADMDALPLQELVEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 93 ~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~-~g~G---~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
.++|.|.|- .-.|++ +|. + -+.+ | .+|.|+.+++++++.+.+ ++.||..+....|-
T Consensus 259 ~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 259 DKPFVLVGK----------GITFDT--GGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp SCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------ceEecc--CCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 234444332 112221 110 0 0122 3 488999999999998875 66888888877776
No 62
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=87.42 E-value=8.9 Score=35.00 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--CCeEeec-------CCce--------------EEEEEcCC--
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG--IPYAYPV-------AKTG--------------IVAQIGSG-- 91 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~n--------------lia~~~~~-- 91 (260)
..+-+.+.|+|++-|.---.-...+++..+.++++| ++++..+ +.+. ++-+|.+.
T Consensus 180 ~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~ 259 (503)
T 1gyt_A 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNAS 259 (503)
T ss_dssp HHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCC
Confidence 456688999999998644445677888888889999 8887631 1111 22222221
Q ss_pred -CCcEEEEEeccCCCCCCCCCCCccccccCCc-c-ccCC---C---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 92 -SRPVVVLRADMDALPLQELVEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 92 -~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~-~g~G---~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
..++|.|.|- .-.|++ +|. | -+.| | .+|.|+.+++++++.+.+ ++.||..+....|-
T Consensus 260 ~~~~~i~LVGK----------GITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 260 EDARPIVLVGK----------GLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp TTCCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCcEEEEcC----------ceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1133333332 112321 111 1 1223 3 489999999999998875 66888888887775
No 63
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=87.21 E-value=9.4 Score=34.66 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeEeec-------CCce--------------EEEEEcCC-CC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------AKTG--------------IVAQIGSG-SR 93 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~~n--------------lia~~~~~-~~ 93 (260)
..+-+.+.|+|++-|.---.-...+++..+.+++. |++++..+ +.+. +..+|.+. ..
T Consensus 175 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 254 (490)
T 3jru_B 175 TAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGDA 254 (490)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTTS
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCCC
Confidence 35678899999999875445567788888888887 88887531 1111 22222221 22
Q ss_pred cEEEEEeccCCCCCCCCCCCccccccCCc-c-ccCC---C---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 94 PVVVLRADMDALPLQELVEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 94 ~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~-~g~G---~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
++|.|.|- .-.|++ +|. + -+.+ | .+|.|+.+++++++.+.+ ++.||..+....|-
T Consensus 255 ~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 255 RPYVLVGK----------GITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp CCEEEEEC----------EEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CcEEEEcC----------eeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 33333332 112221 110 0 0222 3 489999999999998875 66888888877776
No 64
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=86.98 E-value=8.9 Score=34.79 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeEeec-------CCce--------------EEEEEcCC--C
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------AKTG--------------IVAQIGSG--S 92 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~~n--------------lia~~~~~--~ 92 (260)
..+-+.+.|+|++-|.---.-...+++..+.+++. |++++..+ +.+. +..+|.++ .
T Consensus 163 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 242 (486)
T 3pei_A 163 IACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEG 242 (486)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCC
Confidence 35668899999999975445567888888888888 88887531 1111 22222221 1
Q ss_pred CcEEEEEeccCCCCCCCCCCCccccccCCc-c-ccC---CC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 93 RPVVVLRADMDALPLQELVEWEHKSKIDGK-M-HAC---GH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 93 ~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~-~g~---G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
.++|.|.|- .-.|++ +|. + -+. +| .+|.|+.+++++++.+.+ ++.+|..+....|-
T Consensus 243 ~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 243 DAPIVLVGK----------GLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp SCCEEEEEE----------EEETEE--CC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CCcEEEEcc----------ceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 233433332 112221 111 0 022 23 389999999999998875 66888888887776
No 65
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=86.89 E-value=9 Score=34.77 Aligned_cols=119 Identities=11% Similarity=-0.000 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--CCeEeec-------CCceEEEEEcCC-CCcEEEEEeccCCCC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG--IPYAYPV-------AKTGIVAQIGSG-SRPVVVLRADMDALP 106 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~nlia~~~~~-~~~~i~l~~H~DtVp 106 (260)
..+-+.+.|+|++-|.---.-...+++..+.++++| ++++..+ +.+.+++.=++. ..|+++...+. |
T Consensus 160 ~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g 236 (484)
T 1lam_A 160 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---G 236 (484)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---C
T ss_pred HHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---C
Confidence 356688999999998644455677888888899989 8877531 122222221222 12444433221 1
Q ss_pred CC-CC--------CCCccccccCCc-c-ccCC---C---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 107 LQ-EL--------VEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 107 ~~-~~--------~~w~~~~~~~g~-~-~g~G---~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
.+ +. ..-.|++ +|. | -+.+ | .+|.|+.+++++++.+.+ ++.||..+....|-
T Consensus 237 ~~~~~~~~i~LVGKGITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 237 SPNASEPPLVFVGKGITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp SSSTTSCCEEEEECEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCCCcEEEEecceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 11 00 0112321 111 0 1222 3 389999999999998875 66888888777776
No 66
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=86.44 E-value=11 Score=34.45 Aligned_cols=112 Identities=9% Similarity=0.053 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CCce--------------EEEEEcCC--CC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTG--------------IVAQIGSG--SR 93 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~n--------------lia~~~~~--~~ 93 (260)
..+-+.+.|+|++-|.---.-...+++..+.+++.|++++..+ +.+. +..+|.++ ..
T Consensus 196 ~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 275 (515)
T 3kzw_A 196 IGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDE 275 (515)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSC
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 3566889999999997544556788888899999999887631 1111 22222221 12
Q ss_pred cEEEEEeccCCCCCCCCCCCccccccCCc-cc-c---CCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 94 PVVVLRADMDALPLQELVEWEHKSKIDGK-MH-A---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 94 ~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~~-g---~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
++|.|.|- .-.|++ +|. |- + .+| .+|.|+.+++++++.+.+ ++.+|..+....|-
T Consensus 276 ~~i~LVGK----------GiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 276 APIALVGK----------GITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CCEEEEEE----------EEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred CcEEEecC----------ceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 33433332 111221 110 00 1 234 388999999999998875 66888888877776
No 67
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=86.21 E-value=13 Score=33.87 Aligned_cols=111 Identities=10% Similarity=-0.005 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CCce--------------EEEEEcCC--CCc
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTG--------------IVAQIGSG--SRP 94 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~n--------------lia~~~~~--~~~ 94 (260)
.+-+.+.|+|++-|.---.-...+++..+.++++|++++..+ +.+. +..+|++. +.+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 456789999999987544556788888898999999887632 1111 22223222 123
Q ss_pred EEEEEeccCCCCCCCCCCCccccccCCc-cc-cC---CC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 95 VVVLRADMDALPLQELVEWEHKSKIDGK-MH-AC---GH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~-~~-g~---G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
+|.|.|- .-.|++ +|. |- +. +| .+|.|+.+++++++.+.+ ++.+|..+....|-
T Consensus 284 ~iaLVGK----------GITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGK----------GIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEE----------EEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred cEEEecC----------ceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 4444332 111221 111 00 11 23 388889999999998865 67888888887776
No 68
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=86.10 E-value=12 Score=33.75 Aligned_cols=119 Identities=14% Similarity=0.089 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecC------CceEEEEEcCCC-CcEEEEEeccCCCCCCC
Q 024905 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA------KTGIVAQIGSGS-RPVVVLRADMDALPLQE 109 (260)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~------~~nlia~~~~~~-~~~i~l~~H~DtVp~~~ 109 (260)
..+-+.+.|+|++-|.---.-...+++..+.+++.|++++..+. .+.+++.=++.. .|+++...+ . |.++
T Consensus 166 ~a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y--~-~~~~ 242 (482)
T 3ij3_A 166 WLTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW--G-DIKA 242 (482)
T ss_dssp HHHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE--S-CTTS
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe--C-CCCC
Confidence 34568899999999864334567788888888999998875311 111221112222 244444333 1 2110
Q ss_pred C------CCCccccccCCc-cc-c---CCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 110 L------VEWEHKSKIDGK-MH-A---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 110 ~------~~w~~~~~~~g~-~~-g---~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
+ ..-.|++ +|. |- + .+| .+|.|+.+++++++.+.+ ++.||..+....|-
T Consensus 243 ~~i~LVGKGITFDs--GGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 243 PKVTLVGKGVCFDS--GGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp CEEEEEECEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CeEEEEccceEeec--CCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 0 0111221 111 00 1 234 388999999999998875 67888888877776
No 69
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=80.87 E-value=33 Score=31.30 Aligned_cols=112 Identities=15% Similarity=0.037 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeec-------CC-------------c-eEEEEEcCC--CCc
Q 024905 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AK-------------T-GIVAQIGSG--SRP 94 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~-nlia~~~~~--~~~ 94 (260)
.+-+.+.|+|++.|.---.-...++...+.++++|++++..+ +- + -+..+|.+. ..+
T Consensus 205 a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 456889999999997544556677788888888899887531 11 1 223333322 124
Q ss_pred EEEEEeccCCCCCCCCCCCcccc----cc--CC-ccccCCC---cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905 95 VVVLRADMDALPLQELVEWEHKS----KI--DG-KMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (260)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~----~~--~g-~~~g~G~---kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE 162 (260)
+|.|.|- .-.|++ .+ .| .|. +| .+|.|+.+++++++.+.+ ..+.+|..+....|-
T Consensus 285 ~iaLVGK----------GITFDsGG~slKp~~g~~M~--~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 285 KIALVGK----------GITFDSGGYNLKAAPGSMID--LMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp EEEEEEE----------EEEEECCTTSCSCSTTCCGG--GGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred cEEEecC----------ceEeecCCcccCCCCCcCHH--HhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 4555443 112221 11 01 111 23 388889999999998765 224678777777766
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=77.87 E-value=0.58 Score=42.43 Aligned_cols=47 Identities=11% Similarity=0.127 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhCCCCeEe-----------------ecCCce-EEEEEcCCC---CcEEEEEeccCCC
Q 024905 58 HNTSALIRRELDKLGIPYAY-----------------PVAKTG-IVAQIGSGS---RPVVVLRADMDAL 105 (260)
Q Consensus 58 ~~~~~~l~~~l~~~G~~~~~-----------------~~~~~n-lia~~~~~~---~~~i~l~~H~DtV 105 (260)
..+.+++.++|++.||+ +. .+..+| ++|...+.. .+.+++.||+|.+
T Consensus 38 ~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 38 RECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp SSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 36788999999999997 21 011244 888765432 2459999999998
No 71
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=76.32 E-value=5.7 Score=37.91 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCC-eEe
Q 024905 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIP-YAY 77 (260)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~-~~~ 77 (260)
..+.+.+.+.++. +.+.+.++.|.++|-.+| .+.++++|+.+.|+++|++ ++.
T Consensus 12 ~~l~~~~~~~~~~--~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 12 QSIRWKLVSEMKA--ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -CHHHHHHHHCCH--HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 3445555555543 578899999999998877 5788999999999999998 543
No 72
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=73.35 E-value=2.7 Score=37.29 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeEe
Q 024905 38 DWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAY 77 (260)
Q Consensus 38 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~ 77 (260)
+.+.+.++.|.+.|..+| .+.++++|+.+.|+++|++++.
T Consensus 16 ~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 16 ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 566777778877776655 5789999999999999997654
No 73
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=63.12 E-value=19 Score=32.12 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=29.6
Q ss_pred HHHHHHHHHHH-hC-C--CCCcchHHHHHHHHHHHHhCCC-CeEe
Q 024905 38 DWLVSVRRQIH-EN-P--ELLFEEHNTSALIRRELDKLGI-PYAY 77 (260)
Q Consensus 38 ~~~~~~~~~l~-~i-p--s~s~~e~~~~~~l~~~l~~~G~-~~~~ 77 (260)
+.+.+.+++|. .+ | +-|..+.++++|+.+.|++.|+ +++.
T Consensus 21 ~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~ 65 (444)
T 3iib_A 21 SLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYK 65 (444)
T ss_dssp CHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEe
Confidence 35677777777 33 3 3345789999999999999999 4543
No 74
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=53.41 E-value=13 Score=35.05 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhC---CCCCc--chHHHHHHHHHHHHhCCCCe
Q 024905 24 ILTNQVMISAQQDKDWLVSVRRQIHEN---PELLF--EEHNTSALIRRELDKLGIPY 75 (260)
Q Consensus 24 ~~~~~i~~~i~~~~~~~~~~~~~l~~i---ps~s~--~e~~~~~~l~~~l~~~G~~~ 75 (260)
.+.+.+.+.++. +.+.+.++.|.+. |-.+| .+.++++||.+.|+++|++.
T Consensus 6 ~l~~~l~~~i~~--~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 6 DLKRKLSEKLDS--TDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHHT--CCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhCCH--HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 455566666664 4677888888773 44444 67899999999999999974
No 75
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=48.91 E-value=11 Score=33.73 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=29.7
Q ss_pred CccccCC--CcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC-CChHH
Q 024905 121 GKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFH 169 (260)
Q Consensus 121 g~~~g~G--~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g-~G~~~ 169 (260)
+.+.+++ .+.++.+++.+++.++ ..+.++.++| ..||.| .|++-
T Consensus 227 ~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~g 273 (428)
T 2ijz_A 227 EFIAGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCG 273 (428)
T ss_dssp SSSSCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHH
T ss_pred CeEEeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhh
Confidence 4554544 3577777777776653 3567888888 999998 55543
No 76
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=43.99 E-value=12 Score=33.76 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC
Q 024905 130 VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (260)
Q Consensus 130 g~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g 164 (260)
.++.+++.| |.+.. .++.++.++++..||.|
T Consensus 264 ~~~~~~l~a---l~~~~-~~~~~~~~~~~d~EEVG 294 (461)
T 2glj_A 264 ICAYTSFEA---MLEMK-NAKKTCITILVDKEEVG 294 (461)
T ss_dssp HHHHHHHHH---HHTCC-SCSSCEEEEEECCGGGT
T ss_pred HHHHHHHHH---HHhhc-cCCCeEEEEEEccCCCC
Confidence 444444444 44433 46779999999999987
No 77
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=43.32 E-value=6 Score=35.68 Aligned_cols=41 Identities=17% Similarity=0.124 Sum_probs=25.1
Q ss_pred CccccCCC--cHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCC
Q 024905 121 GKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (260)
Q Consensus 121 g~~~g~G~--kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g 164 (260)
+.+.+++. +.++.+++.+++.+++ .++.++.++++..||.|
T Consensus 247 ~~I~s~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 247 ALIGAYGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIG 289 (458)
T ss_dssp CEEEESSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC-
T ss_pred CeEEEecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccC
Confidence 34444443 3555555555443321 46789999999999988
No 78
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=31.84 E-value=1.3e+02 Score=27.29 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=32.6
Q ss_pred cchHHHHHHHHHHHHhCCCCeE-----e--ec--------CCceEEEEE-cCC-C--CcEEEEEeccCCC
Q 024905 55 FEEHNTSALIRRELDKLGIPYA-----Y--PV--------AKTGIVAQI-GSG-S--RPVVVLRADMDAL 105 (260)
Q Consensus 55 ~~e~~~~~~l~~~l~~~G~~~~-----~--~~--------~~~nlia~~-~~~-~--~~~i~l~~H~DtV 105 (260)
.-+..+.+++.++|++.||..- + .. +...++|.. ++. + ..--++.+|.|.=
T Consensus 50 pT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP 119 (496)
T 3vat_A 50 PSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSP 119 (496)
T ss_dssp SSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCC
Confidence 4467899999999999999641 1 01 123566653 332 1 2345789999974
No 79
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=30.93 E-value=1.3e+02 Score=20.60 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=15.9
Q ss_pred chHHHHHHHHHHHHh-CCCCeE
Q 024905 56 EEHNTSALIRRELDK-LGIPYA 76 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~-~G~~~~ 76 (260)
.|++++++|.+.|++ +|=..+
T Consensus 42 ~ek~iA~~IK~~fDkkyG~~Wh 63 (97)
T 4ds1_A 42 LERDIAGTVKKQLDVKYGNTWH 63 (97)
T ss_dssp SHHHHHHHHHHHHHHHHCSCEE
T ss_pred CHHHHHHHHHHHHhCccCCCCE
Confidence 578999999999975 464443
No 80
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=30.04 E-value=42 Score=30.07 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCCCCceEEEEeecCCCCC
Q 024905 136 LGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (260)
Q Consensus 136 l~a~~~L~~~~~~~~~~i~~~~~~dEE~g 164 (260)
..++++|.+. .++.++.++++..||.|
T Consensus 255 ~~~l~al~~~--~~~~~~~~~~~d~EEVG 281 (450)
T 2glf_A 255 YTALRALLSA--NPEKSIGVIFFDKEEIG 281 (450)
T ss_dssp HHHHHHHHHC--CCSSCEEEEEESCGGGT
T ss_pred HHHHHHHHhc--CCCceEEEEEEcccccC
Confidence 3344445444 45678999999999977
No 81
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=25.43 E-value=1.1e+02 Score=21.60 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=28.3
Q ss_pred CcchHHHHHHHHHHHHhCCCCeEe-ecCCceEEEEEc
Q 024905 54 LFEEHNTSALIRRELDKLGIPYAY-PVAKTGIVAQIG 89 (260)
Q Consensus 54 s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~nlia~~~ 89 (260)
+.+-...+++..+.+++.|+++.. ...|.|+..++.
T Consensus 4 T~eMe~~~d~~~e~l~~~~ie~K~~~~~RSN~~i~f~ 40 (108)
T 1kaf_A 4 TSDMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILE 40 (108)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHHhhhcCceeeeeEeeccceEEeee
Confidence 344467889999999999999854 346899999884
No 82
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=24.73 E-value=59 Score=23.06 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=23.5
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCeEe
Q 024905 51 PELLFEEHNTSALIRRELDKLGIPYAY 77 (260)
Q Consensus 51 ps~s~~e~~~~~~l~~~l~~~G~~~~~ 77 (260)
-|.+|+-+++++.|.+.|++.|++++.
T Consensus 6 ~S~tGnT~~iA~~ia~~l~~~g~~v~~ 32 (138)
T 5nul_A 6 WSGTGNTEKMAELIAKGIIESGKDVNT 32 (138)
T ss_dssp ECSSSHHHHHHHHHHHHHHHTTCCCEE
T ss_pred ECCCchHHHHHHHHHHHHHHCCCeEEE
Confidence 467899999999999999999988764
No 83
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=23.61 E-value=1.1e+02 Score=21.13 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=15.3
Q ss_pred chHHHHHHHHHHHHh-CCCCe
Q 024905 56 EEHNTSALIRRELDK-LGIPY 75 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~-~G~~~ 75 (260)
.|++++++|+++|++ +|-..
T Consensus 47 ~ekdiA~~IK~~fDkkyG~~W 67 (102)
T 1yo3_A 47 VEKDIAAHIKKEFDRKYDPTW 67 (102)
T ss_dssp SHHHHHHHHHHHHHHHHCSCE
T ss_pred cHHHHHHHHHHHHhhhcCCCC
Confidence 578999999999975 45443
No 84
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=23.34 E-value=1.5e+02 Score=20.03 Aligned_cols=40 Identities=3% Similarity=-0.048 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCC
Q 024905 35 QDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP 74 (260)
Q Consensus 35 ~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~ 74 (260)
+..++.+..|.++++-.+++.+-+++++-..+.|..-+.+
T Consensus 10 ~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~ 49 (89)
T 2qsb_A 10 NLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENES 49 (89)
T ss_dssp HHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTSC
T ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHhCCCcc
Confidence 3445667789999999999999999999999988765543
No 85
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=22.54 E-value=3e+02 Score=25.34 Aligned_cols=50 Identities=10% Similarity=0.192 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHhCCCCeE-----ee----------cCCceEEEEE-cCC--CC-c-EEEEEeccCCC
Q 024905 56 EEHNTSALIRRELDKLGIPYA-----YP----------VAKTGIVAQI-GSG--SR-P-VVVLRADMDAL 105 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~~G~~~~-----~~----------~~~~nlia~~-~~~--~~-~-~i~l~~H~DtV 105 (260)
-+..+.+++.++|++.||..- |. ....+++|.. +.. ++ . --++.+|.|.=
T Consensus 22 T~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 22 SNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp SHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 357889999999999999641 10 1234566654 322 22 3 56889999974
No 86
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=20.74 E-value=87 Score=21.88 Aligned_cols=28 Identities=7% Similarity=-0.142 Sum_probs=23.9
Q ss_pred CCCCCcchHHHHHHHHHHHHhCCCCeEe
Q 024905 50 NPELLFEEHNTSALIRRELDKLGIPYAY 77 (260)
Q Consensus 50 ips~s~~e~~~~~~l~~~l~~~G~~~~~ 77 (260)
.-|.+|+-+++++.+.+.+++.|++++.
T Consensus 6 y~S~tGnT~~~a~~i~~~l~~~g~~v~~ 33 (137)
T 2fz5_A 6 YWSGTGNTEAMANEIEAAVKAAGADVES 33 (137)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCCChHHHHHHHHHHHHHhCCCeEEE
Confidence 3577889999999999999999988765
No 87
>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...
Probab=20.16 E-value=1.6e+02 Score=19.70 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=14.0
Q ss_pred chHHHHHHHHHHHHh-CCC
Q 024905 56 EEHNTSALIRRELDK-LGI 73 (260)
Q Consensus 56 ~e~~~~~~l~~~l~~-~G~ 73 (260)
.|++++++|.+.|++ +|-
T Consensus 34 ~ek~iA~~IK~~fD~kyg~ 52 (89)
T 3rjs_A 34 IEKDIAAFIKKEFDRKHNP 52 (89)
T ss_dssp SHHHHHHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHhcccCC
Confidence 368899999999975 453
No 88
>2e8g_A Hypothetical protein PH0536; oligonucleotide/oligosaccharide-binding fold, alpha-helices bundle, structural genomics, NPPSFA; 1.70A {Pyrococcus horikoshii}
Probab=20.07 E-value=48 Score=27.04 Aligned_cols=53 Identities=11% Similarity=-0.086 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhHHHH--HHHHHHHHhCCCCCcchH--HHHHHHHHHHHhCCCCeEe
Q 024905 25 LTNQVMISAQQDKDWL--VSVRRQIHENPELLFEEH--NTSALIRRELDKLGIPYAY 77 (260)
Q Consensus 25 ~~~~i~~~i~~~~~~~--~~~~~~l~~ips~s~~e~--~~~~~l~~~l~~~G~~~~~ 77 (260)
..+.+.+.+.+..+.+ .+.+++++..+..+..|+ ...+.+...|...|++++.
T Consensus 67 ~~~~~~~~~~~i~~~l~g~~Wl~~~l~~~~~~~~~k~~~~~~~i~~~L~~lg~evE~ 123 (241)
T 2e8g_A 67 QMKDLKEKAKGIIEALGGEDWHHKFLSQASREDREKVEEQVARIKFFLNTILNLDRR 123 (241)
T ss_dssp HHHHHHHHHHHHHHHHTSTTHHHHHHHTCSSTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHhcCccccchhhcccccHHHHHHHHHHhccchhh
Confidence 3355555555554444 356788888887664443 2567777888888887753
Done!