Query 024906
Match_columns 260
No_of_seqs 162 out of 1133
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 16:29:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2po1_A Probable exosome comple 100.0 1.6E-53 5.4E-58 371.6 29.9 235 25-259 4-242 (249)
2 2wnr_B Probable exosome comple 100.0 4.6E-53 1.6E-57 366.8 30.0 225 32-256 11-239 (240)
3 2nn6_B Exosome complex exonucl 100.0 2.2E-52 7.7E-57 364.4 28.6 227 33-259 12-244 (249)
4 2je6_B RRP41, exosome complex 100.0 6.1E-52 2.1E-56 361.8 30.8 228 33-260 16-247 (250)
5 2nn6_F MTR3, exosome component 100.0 1.2E-53 4.2E-58 376.8 19.4 246 12-259 3-267 (272)
6 3m7n_D Probable exosome comple 100.0 6.5E-52 2.2E-56 362.7 28.9 223 35-257 14-243 (258)
7 2wp8_B Exosome complex compone 100.0 4E-51 1.4E-55 355.9 29.3 226 33-259 8-240 (246)
8 3b4t_A Ribonuclease PH; RNAse, 100.0 5.1E-50 1.7E-54 351.9 27.1 224 33-257 2-248 (262)
9 3dd6_A Ribonuclease PH; exorib 100.0 1.5E-49 5.1E-54 347.3 28.2 225 32-257 6-253 (255)
10 1oys_A Ribonuclease PH; transf 100.0 3.7E-50 1.3E-54 349.6 23.9 219 37-256 1-242 (245)
11 2nn6_D Exosome complex exonucl 100.0 2.6E-49 8.7E-54 342.7 28.3 221 32-257 11-236 (237)
12 1r6l_A Ribonuclease PH; beta-a 100.0 4.6E-49 1.6E-53 341.5 28.4 215 37-252 2-238 (239)
13 1udn_A Ribonuclease PH, RNAse 100.0 3.4E-49 1.2E-53 345.4 26.6 216 37-253 1-238 (255)
14 2po1_B Probable exosome comple 100.0 1.5E-47 5.1E-52 338.8 27.5 220 32-254 21-275 (277)
15 2je6_A RRP42, exosome complex 100.0 1E-46 3.5E-51 333.3 26.7 226 25-252 16-276 (277)
16 3hkm_A OS03G0854200 protein; R 100.0 1.1E-46 3.6E-51 327.6 25.5 215 35-257 2-236 (246)
17 3m7n_G Probable exosome comple 100.0 7E-47 2.4E-51 331.4 24.3 216 32-249 17-258 (259)
18 2wnr_A Probable exosome comple 100.0 2.9E-46 9.9E-51 329.5 26.4 218 32-252 19-270 (271)
19 2nn6_C Exosome complex exonucl 100.0 5.1E-47 1.8E-51 335.4 19.3 230 23-254 9-275 (278)
20 2nn6_A Polymyositis/scleroderm 100.0 2.1E-45 7.3E-50 334.6 23.7 223 32-259 34-294 (358)
21 2wp8_A Exosome complex compone 100.0 2.6E-45 8.8E-50 328.6 23.3 223 32-259 18-291 (305)
22 2nn6_E Exosome complex exonucl 100.0 8.6E-46 2.9E-50 331.6 19.2 225 32-258 31-295 (305)
23 3gme_A Polyribonucleotide nucl 100.0 5E-42 1.7E-46 325.1 25.9 217 34-253 311-543 (549)
24 3u1k_A Polyribonucleotide nucl 100.0 1.9E-41 6.4E-46 326.8 26.0 217 34-254 315-557 (630)
25 4aid_A Polyribonucleotide nucl 100.0 2.2E-41 7.5E-46 329.4 25.1 218 34-254 327-560 (726)
26 1e3p_A Guanosine pentaphosphat 100.0 5.5E-41 1.9E-45 328.9 26.6 218 34-254 352-589 (757)
27 3krn_A Protein C14A4.5, confir 100.0 5.9E-45 2E-49 312.3 -2.1 207 44-257 2-211 (222)
28 3cdi_A Polynucleotide phosphor 100.0 8.6E-41 3E-45 326.5 26.2 219 34-255 317-551 (723)
29 3u1k_A Polyribonucleotide nucl 100.0 2E-33 7E-38 270.9 26.4 206 48-260 15-233 (630)
30 3gme_A Polyribonucleotide nucl 100.0 2.2E-28 7.4E-33 231.9 26.3 204 48-260 14-232 (549)
31 4aid_A Polyribonucleotide nucl 100.0 7.1E-28 2.4E-32 234.6 28.0 206 48-260 28-246 (726)
32 3cdi_A Polynucleotide phosphor 100.0 1.9E-27 6.7E-32 232.4 25.5 211 37-260 15-238 (723)
33 1e3p_A Guanosine pentaphosphat 100.0 2.9E-27 1E-31 231.9 25.8 207 48-260 37-273 (757)
34 1whu_A Polynucleotide phosphor 88.0 0.22 7.6E-06 36.4 2.0 15 34-48 89-103 (104)
35 2k9i_A Plasmid PRN1, complete 49.0 16 0.00054 22.4 3.2 36 223-258 15-50 (55)
36 1xpp_A TA1416, DNA-directed RN 38.5 84 0.0029 23.1 6.1 44 214-257 63-106 (115)
37 2kel_A SVTR protein, uncharact 36.4 15 0.00052 23.4 1.5 36 223-258 19-54 (56)
38 1ybx_A Conserved hypothetical 26.7 1.9E+02 0.0065 22.0 6.5 45 199-244 73-121 (143)
39 2ba3_A NIKA; dimer, bacterial 20.1 66 0.0023 19.4 2.3 30 223-252 21-50 (51)
No 1
>2po1_A Probable exosome complex exonuclease 1; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_A* 2pnz_A 2po2_A*
Probab=100.00 E-value=1.6e-53 Score=371.62 Aligned_cols=235 Identities=32% Similarity=0.474 Sum_probs=217.5
Q ss_pred CCCcccCCCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEccccccc-ccCCCceeEEEEEEEeec
Q 024906 25 RPPIFSGSDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKK-AMMYSNIGRLNCNVSYTT 103 (260)
Q Consensus 25 ~~~~~~~~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~-~~~~~~~g~l~v~v~~~p 103 (260)
+|+.++...++++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+||.+..+ +.+.+++|+|+|+|+++|
T Consensus 4 ~p~~~~~~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~gp~e~~~~~~~~~~~g~l~v~~~~~p 83 (249)
T 2po1_A 4 KPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMAP 83 (249)
T ss_dssp -----CCSBCSSCBTTSCCTTCCCCEEEEECCCSSSSEEEEEEETTEEEEEEEEEEEECSSGGGCCSSSCEEEEEEEECG
T ss_pred CCcceEEecccCccCCCCCcccccCEEEEeCCcCCCCEEEEEEECCcEEEEEEEcCcccCcccccCCCceEEEEEEEeCC
Confidence 4666666778999999999999999999999999999999999999999999999776543 677899999999999999
Q ss_pred CcccCC---CCCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEE
Q 024906 104 FATPVR---GQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVS 180 (260)
Q Consensus 104 ~~~~~~---g~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt 180 (260)
|+++.+ +++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+||||+++|+++|
T Consensus 84 ~a~~~~~~~~~~~~~~~~s~li~r~l~~~i~l~~~p~~~i~I~~~VL~~dG~~~~aai~aa~~AL~da~iP~~~~v~avs 163 (249)
T 2po1_A 84 FSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACA 163 (249)
T ss_dssp GGSSSCCCSSCCHHHHHHHHHHHHHHGGGBCGGGSTTEEEEEEEEEEECCSCHHHHHHHHHHHHHHHTTCCBSSCCEEEE
T ss_pred cccccccCCCCCHHHHHHHHHHHHHHHhhccHHHCCCCEEEEEEEEEecCCCHHHHHHHHHHHHHHhcCCCccCceEEEE
Confidence 999854 37789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 181 VSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 181 ~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
+|++++.+++|||..||..+++.++|+++++.++|+++++.|.++.+++.+++++|.++++++.++++++|+++.+++.
T Consensus 164 ~g~~~~~~l~Dp~~~Ee~~~~~~l~va~~~~~~~i~~~~~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~~~ 242 (249)
T 2po1_A 164 AGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREALKEKYLKIA 242 (249)
T ss_dssp EEEETTEEEESCCHHHHHTCSEEEEEEEEGGGTEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCEEEecCcHHHhccCCceEEEEEECCCCCEEEEEEEcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999997788899999999999999999999999999999999999999999887764
No 2
>2wnr_B Probable exosome complex exonuclease 1; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=4.6e-53 Score=366.84 Aligned_cols=225 Identities=30% Similarity=0.537 Sum_probs=208.5
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccc-cccCCCceeEEEEEEEeecCcccCCC
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESK-KAMMYSNIGRLNCNVSYTTFATPVRG 110 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~-~~~~~~~~g~l~v~v~~~p~~~~~~g 110 (260)
..++++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+||.+.. ++.+.|++|+++++|+++||+++.++
T Consensus 11 ~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~gp~e~~~~~~~~~~~g~l~~~~~~~p~a~~~~~ 90 (240)
T 2wnr_B 11 KTSPSVREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIRCRYNMAPFSVEERK 90 (240)
T ss_dssp ----CCCTTSCCTTCCCCEEEEESCCSSSSEEEEEEETTEEEEEEEEEEEECCSSSSCCSSSCEEEEEEEECTTSSSSCC
T ss_pred ecccCccCCCCCcCCccCeEEEeCCCCCCCEEEEEEECCeEEEEEEEcCCCCCcccccCCCcEEEEEEEEeCCCCcCCcc
Confidence 46789999999999999999999999999999999999999999999987643 35678999999999999999998653
Q ss_pred ---CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCe
Q 024906 111 ---QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKN 187 (260)
Q Consensus 111 ---~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~ 187 (260)
++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+||||+++|+++|+|++++.
T Consensus 91 ~~~~~~~~~~l~~ll~r~l~~~i~l~~~p~~~I~i~~~VL~~dG~~~~a~i~aa~~AL~da~iP~~~~v~avs~g~~~~~ 170 (240)
T 2wnr_B 91 RPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQ 170 (240)
T ss_dssp CSSCCHHHHHHHHHHHHHHGGGBCGGGSTTEEEEEEEEEEECCSCHHHHHHHHHHHHHHHTTCCBSSCCEEEEEEESSSS
T ss_pred CCCCChhHHHHHHHHHHHHHHhcCHHHCCCcEEEEEEEEEeCCCCHHHHHHHHHHHHHHHcCCccccceeeEEEEEECCE
Confidence 67799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024906 188 LLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAAS 256 (260)
Q Consensus 188 iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~ 256 (260)
+++|||..||..+++.++|+++++.|+|+.+++.|.++.+++.+++++|.++|+++.+.++++|+++.+
T Consensus 171 ~l~Dp~~~Ee~~~~~~~~v~~~~~~~~i~~lq~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~ 239 (240)
T 2wnr_B 171 VVLDLSEEEDKEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRKRYG 239 (240)
T ss_dssp EEESCCSHHHHSCSEEEEEEEETTTTEEEEEEEEECBCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEeCCCHHHhccCCceEEEEEECCCCCEEEEEEEcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999997788899999999999999999999999999999999999999988754
No 3
>2nn6_B Exosome complex exonuclease RRP41; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=2.2e-52 Score=364.36 Aligned_cols=227 Identities=25% Similarity=0.402 Sum_probs=213.4
Q ss_pred CCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEccccccc--ccCCCceeEEEEEEEeecCcccCC-
Q 024906 33 DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKK--AMMYSNIGRLNCNVSYTTFATPVR- 109 (260)
Q Consensus 33 ~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~--~~~~~~~g~l~v~v~~~p~~~~~~- 109 (260)
.++++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|.+.+. ....+++|+|+++|+++||+++++
T Consensus 12 ~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~g~~~~~~~~~~~~~~~g~l~~~~~~~p~a~~~~~ 91 (249)
T 2nn6_B 12 SDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRALVNCQYSSATFSTGERK 91 (249)
T ss_dssp CBTTBCSSSSCTTSCCCEEEEESCSSSSSEEEEEEESSCEEEEEEEEEEECCSSSCCCCCSSCCEEEEEEECTTTSSSCC
T ss_pred ccCCcCCCCCCcCCcCCeEEEeCCCCCCCeEEEEEECCeEEEEEEEccCCccccccccCCCcEEEEEEEEcCCCcccccc
Confidence 47899999999999999999999999999999999999999999999976432 125789999999999999999864
Q ss_pred --C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCC
Q 024906 110 --G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGK 186 (260)
Q Consensus 110 --g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~ 186 (260)
| ++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+||||+++|+++|+|++++
T Consensus 92 ~~~~~~~~~~~~~~ll~r~l~~~i~~~~~p~~~I~i~~~VL~~dG~~~~A~i~aa~~AL~da~iPl~~~v~avs~g~~~~ 171 (249)
T 2nn6_B 92 RRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDG 171 (249)
T ss_dssp CTTTSTHHHHHHHHHHHHHHHHTTCGGGCTTEEEEEEEEEEECCSCHHHHHHHHHHHHHHHTCCCCSSCCEEEEEEEETT
T ss_pred cCCCCCHhHHHHHHHHHHHHHHhcCHHHCCCcEEEEEEEEEeCCCCHHHHHHHHHHHHHHhcCCcccCCeeeEEEEEECC
Confidence 3 6778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 187 NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 187 ~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
.+++|||..||..+++.++|+++++.++|+.+++.|.++.+++.+++++|.++++++.++++++|+++.+++.
T Consensus 172 ~~l~Dp~~~Ee~~~~~~~~v~~~~~~~~i~~lq~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~~~ 244 (249)
T 2nn6_B 172 TALADLSHVEEAAGGPQLALALLPASGQIALLEMDARLHEDHLERVLEAAAQAARDVHTLLDRVVRQHVREAS 244 (249)
T ss_dssp EEEESCCHHHHTSSCCCEEEEEETTTTEEEEEEECSCCBTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEECCChHHhccCCcEEEEEEECCCCCEEEEEEECCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999997678899999999999999999999999999999999999999999987764
No 4
>2je6_B RRP41, exosome complex exonuclease 1; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_B* 2jeb_B* 2br2_B 2c37_B* 2c38_B* 2c39_B* 3l7z_B
Probab=100.00 E-value=6.1e-52 Score=361.80 Aligned_cols=228 Identities=31% Similarity=0.450 Sum_probs=213.3
Q ss_pred CCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccc-cccCCCceeEEEEEEEeecCcccCC--
Q 024906 33 DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESK-KAMMYSNIGRLNCNVSYTTFATPVR-- 109 (260)
Q Consensus 33 ~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~-~~~~~~~~g~l~v~v~~~p~~~~~~-- 109 (260)
+++++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|.+.. ++.+.+++|+|+|+|+++||+++.+
T Consensus 16 l~~~~R~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~g~~e~~~~~~~~~~~g~l~v~~~~~p~a~~~~~~ 95 (250)
T 2je6_B 16 LDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKN 95 (250)
T ss_dssp CTTSCBTTSCCTTCCCCEEEEESCCSSSSEEEEEEETTEEEEEEEEEEEECSSGGGSCSSSCEEEEEEEECTTSSSSCCC
T ss_pred cCCCccCCCCCccCcCCeEEEeCCCCCCCeEEEEEECCcEEEEEEEcccccccccccCCCcEEEEEEEEeCCCccCCccC
Confidence 6789999999999999999999999999999999999999999999987643 3667899999999999999999864
Q ss_pred C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeE
Q 024906 110 G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNL 188 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~i 188 (260)
| ++.++++++++|++.|+++++++.||++.|+|+++||++|||+++|+++|+++||+++||||+++|+++|++++++.+
T Consensus 96 g~~~~~e~~~s~li~r~l~~~i~~~~~p~~~i~I~~~VL~~DG~~~~aai~aa~~AL~~a~iP~~~~v~avsvg~~~~~~ 175 (250)
T 2je6_B 96 PAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVI 175 (250)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTBCGGGSTTEEEEEEEEEEECSSCHHHHHHHHHHHHHHHTTCCBSSCCEEEEEEEETTEE
T ss_pred CCCChhHHHHHHHHHHHHHhhcCHhhCCCcEEEEEEEEEeCCCCHHHHHHHHHHHHHHhcCCCccCceEEEEEEEECCEE
Confidence 3 677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 024906 189 LIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260 (260)
Q Consensus 189 v~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~~ 260 (260)
++|||.+|++.+++.++|+++++.++|+++++.|.++.+++.+++++|.++++++.++++++++++.++|.+
T Consensus 176 l~Dpt~~Ee~~~~~~l~va~~~~~~~i~~v~~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~~~~ 247 (250)
T 2je6_B 176 ILDLNETEAMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKE 247 (250)
T ss_dssp EESCCHHHHHHSSEEEEEEEEGGGTEEEEEEEEECBCHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC----
T ss_pred EeCCCHHHHhcCCceEEEEEECCCCCEEEEEEEcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999976778999999999999999999999999999999999999999999887653
No 5
>2nn6_F MTR3, exosome component 6; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=1.2e-53 Score=376.81 Aligned_cols=246 Identities=33% Similarity=0.499 Sum_probs=204.6
Q ss_pred cceeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccC---
Q 024906 12 KATYSPIDPTRKTRPPIFSGSDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMM--- 88 (260)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~--- 88 (260)
-||||..||.....|+.|. ..++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|.+.+++.+
T Consensus 3 ~d~rr~~gp~~~~~~~~~~--~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~ 80 (272)
T 2nn6_F 3 GDHRRIRGPEESQPPQLYA--ADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGG 80 (272)
T ss_dssp ----------------------------CCCCSSCCCCCCCCCSCCSSSSEEECCCSSSCEEEEEEEEEECC--------
T ss_pred cccccccCCCcccCCcccc--cccCccCCCCCccccCCeEEEeCCCCCCCeEEEEEeCCeEEEEEEECCCcccccccccc
Confidence 4899999999555555886 47889999999999999999999999999999999999999999999988765544
Q ss_pred ---------CCceeEEEEEEEeecCcccCCC---CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhH
Q 024906 89 ---------YSNIGRLNCNVSYTTFATPVRG---QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPV 156 (260)
Q Consensus 89 ---------~~~~g~l~v~v~~~p~~~~~~g---~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a 156 (260)
.+++|++.|+|++.||+++.+. ++.++++++++|+++|+++++++.||++.|+|+++||++|||+++|
T Consensus 81 ~~~~~~~~~~~~~g~l~v~~~~~p~a~~~~~~~~~~~~e~~~s~li~r~l~~~i~~~~~p~~~I~I~~~VL~~DG~~~~a 160 (272)
T 2nn6_F 81 PAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAA 160 (272)
T ss_dssp -----------CBCEEEEEEEECTTSSSSCCCSCCHHHHHHHHHHHHHHHTTTBCSTTSBTCEEEEEEEEEECCSSHHHH
T ss_pred cccccccccCCCceEEEEEEEecCCCcCCccCCCCCHHHHHHHHHHHHHHHHhccHHHCCceEEEEEEEEEeCCCCHHHH
Confidence 6788999999999999998643 5678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcccCeEEEEEEEE---eCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCH-HHHHHH
Q 024906 157 VISCASVALADAGIMMYDLVASVSVSC---LGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWST-PHFNEA 232 (260)
Q Consensus 157 ~i~Aa~~AL~~agip~~~~~~avt~~~---~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~-~~l~~~ 232 (260)
++||+++||+|+||||+++++++++++ .++.+|+|||..|++.+++.++|+++++.++|+++++.|.++. +++.++
T Consensus 161 ai~aa~~AL~da~iP~~~~v~avsvg~~~~~~~~~llDpt~~Ee~~~~~~l~va~~~~~~~I~~i~~~g~~~~~~~l~~~ 240 (272)
T 2nn6_F 161 ALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 240 (272)
T ss_dssp HHHHHHHHHHHHCCCBSSCCEEEECCCCSCSSCCCCSSCCTTTGGGCSSEEEEEEETTTTEEEEEEEECCSSCTTTTHHH
T ss_pred HHHHHHHHHHHcCCcccCcEEEEEEEEeeccCCeEEeCCCHHHhccCCceEEEEEeCCCCCEEEEEEecCCCHHHHHHHH
Confidence 999999999999999999999999999 8899999999999999999999998888899999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 233 MQLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 233 l~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
+++|.++++++.++++++++++.+++.
T Consensus 241 l~~A~~~~~~i~~~~~~~l~~~~~~~~ 267 (272)
T 2nn6_F 241 VRLGLEGCQRLYPVLQQSLVRAARRRG 267 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988763
No 6
>3m7n_D Probable exosome complex exonuclease 1; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 3m85_D 2ba0_F 2ba1_E
Probab=100.00 E-value=6.5e-52 Score=362.69 Aligned_cols=223 Identities=26% Similarity=0.462 Sum_probs=210.9
Q ss_pred CCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccc-cccCCCceeEEEEEEEeecCcccCCC---
Q 024906 35 DWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESK-KAMMYSNIGRLNCNVSYTTFATPVRG--- 110 (260)
Q Consensus 35 ~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~-~~~~~~~~g~l~v~v~~~p~~~~~~g--- 110 (260)
+++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+||.+.. ++.+.|++|+|+++|+++||+++.++
T Consensus 14 ~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~gp~e~~~~~~~~~~~g~l~~~~~~~P~s~~~r~~~~ 93 (258)
T 3m7n_D 14 DGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMAPFSVEERKRPG 93 (258)
T ss_dssp TTEETTSCCTTCCCCEEEEECCCSSSSEEEEEEETTEEEEEEEEEEEECSSSTTCCSSSCEEEEEEEECGGGSSSCCCSS
T ss_pred cCCCCCCCCcCCccCeEEEECCCCCCCceEEEEECCeEEEEEEEcccCCCCccccCCCceEEEEEEEeCCcccccccCCC
Confidence 89999999999999999999999999999999999999999999987654 34578999999999999999998643
Q ss_pred CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEe
Q 024906 111 QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLI 190 (260)
Q Consensus 111 ~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~ 190 (260)
++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+||||+++++++++|++++.+|+
T Consensus 94 ~~~re~ei~~li~r~l~~~i~~~~~p~~~I~V~~~VL~~DG~~~~Aai~aa~lAL~dagiP~~~~v~avsvg~i~~~~ll 173 (258)
T 3m7n_D 94 PDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVL 173 (258)
T ss_dssp CCHHHHHHHHHHHHHHHTTBCGGGSTTEEEEEEEEEEECCTTHHHHHHHHHHHHHHHTTCCBSSEEEEEEEEEETTEEEE
T ss_pred CCHHHHHHHHHHHHHHHhhcCHHhCCceEEEEEEEEEEcCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEECCEEEE
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCeeEEEEEcCCC---CcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024906 191 DPVLEEESYQDGSLMIACMPSR---YEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASD 257 (260)
Q Consensus 191 DPt~~Ee~~~~~~~~va~~~~~---~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~ 257 (260)
|||..|++.+++.++|++++.. ++|+.+++.|.|+.+++.+++++|.++|++++++++++|+++.++
T Consensus 174 Dpt~~Ee~~~~~d~~va~~~~~~~~~~I~~lq~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~ 243 (258)
T 3m7n_D 174 DPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIE 243 (258)
T ss_dssp SCCHHHHHHSSEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHhccCceEEEEEEcCCCCCCCEEEEEecCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999976677 899999999999999999999999999999999999999987654
No 7
>2wp8_B Exosome complex component SKI6; nucleus, hydrolase, RNA-binding, exonucle binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-51 Score=355.89 Aligned_cols=226 Identities=24% Similarity=0.362 Sum_probs=203.5
Q ss_pred CCCCCCCCCCCCCCCcceEEEeCCCCCC-CeeEEEEeCCeEEEEEEEccccc-ccccCCCceeEEEEEEEeecCcccCC-
Q 024906 33 DVDWLRPDSRGFHQCRPAFFRTGAVNSA-SGSAYAEFGNTKVIVSVFGPRES-KKAMMYSNIGRLNCNVSYTTFATPVR- 109 (260)
Q Consensus 33 ~~~~~R~DGR~~~e~R~i~i~~g~l~~a-~GSa~v~~G~T~Vi~~V~gp~~~-~~~~~~~~~g~l~v~v~~~p~~~~~~- 109 (260)
+++++|+|||.++|+|++++++|+++++ +|||+|++|+|+|+|+|++|.+. +++.+.+++|+|+|+|+++||+++++
T Consensus 8 ~~~~~R~DGR~~~e~R~i~i~~g~l~~aa~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~g~l~v~~~~~p~a~~~~~ 87 (246)
T 2wp8_B 8 SPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQMDTSKALLNVSVNINKFSKFERS 87 (246)
T ss_dssp CTTSCCTTSCCTTCCCCEEEEECSCTTTCSEEEEEEETTEEEEEEEEEEEC------CCSSSEEEEEEEEEC--------
T ss_pred cccCccCCCCCcCCccCeEEEeCCCCCCCCceEEEEECCeEEEEEEEecCCcccccccCCCcEEEEEEEEeCCccccccc
Confidence 5789999999999999999999999999 99999999999999999999874 44667899999999999999998853
Q ss_pred ---C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeC
Q 024906 110 ---G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLG 185 (260)
Q Consensus 110 ---g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~ 185 (260)
| ++.++++++++|++.|+++++++.||++.|+|+++||++|||+++|++||+++||+|+||||+++|+++++|+++
T Consensus 88 ~r~g~~~~~~~~~s~li~r~l~~~i~~~~~p~~~I~i~~~VL~~dG~~~~aai~aa~~AL~~a~iP~~~~v~avs~g~~~ 167 (246)
T 2wp8_B 88 KSSHKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALIDAGISMFDYISGISVGLYD 167 (246)
T ss_dssp ------CHHHHHHHHHHHHHHHHHBCTTTSCSEEEEEEEEEEECCSCHHHHHHHHHHHHHHHHTCCBSSCEEEEEEEEET
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhhhHHHCCCeEEEEEEEEEECCCCHHHHHHHHHHHHHHHcCCcccCceeEEEEEEEC
Confidence 3 457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 186 KNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 186 ~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
+.+++|||..|+ .+++.++|+++++.++|+++++.|.++.+++.+++++|.++++++.++++++++++.+++.
T Consensus 168 ~~~l~Dp~~~Ee-~~~~~l~v~~~~~~~~i~~i~~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~~~ 240 (246)
T 2wp8_B 168 TTPLLDTNSLEE-NAMSTVTLGVVGKSEKLSLLLVEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQKRV 240 (246)
T ss_dssp TEEESSCCHHHH-HHSEEEEEEEETTSSCEEEEEECSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CEEEECCCchhh-ccCceEEEEEeCCCCCEEEEEecCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999 9999999987678899999999999999999999999999999999999999999987654
No 8
>3b4t_A Ribonuclease PH; RNAse, tRNA nucleotidyltransferase, RPHA, STRU genomics, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-50 Score=351.91 Aligned_cols=224 Identities=23% Similarity=0.295 Sum_probs=205.6
Q ss_pred CCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC---
Q 024906 33 DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR--- 109 (260)
Q Consensus 33 ~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~--- 109 (260)
+..++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+++...+++...+++|+|+|+|++.||+++.+
T Consensus 2 ~~~g~R~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~p~~~~~~~~g~l~v~~~~~p~a~~~~~~R 81 (262)
T 3b4t_A 2 SHVSKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHSRSDR 81 (262)
T ss_dssp ---CCSTTSCCTTCCCCEEEEETSSSSSSEEEEEEETTEEEEEEEEEEESCC----CCSCCEEEEEEEECGGGSSSCCCC
T ss_pred CCCCcCCCCCCCcCcCCeEEEeCCcCCCCeEEEEEECCCEEEEEEEecCcCCCccCCCCceEEEEEEEeCCCcccccccc
Confidence 56789999999999999999999999999999999999999999999987654555689999999999999998864
Q ss_pred ----C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHc------------CCcc
Q 024906 110 ----G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADA------------GIMM 172 (260)
Q Consensus 110 ----g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~a------------gip~ 172 (260)
| ++.++++++++|++.|+++|+++.||+++|+|+++||++|||+++|++||+++||+++ +|||
T Consensus 82 e~~~G~~~~~~~~isrli~r~lr~~i~~~~l~~~~I~i~~~VL~~DG~~~~aai~aa~~AL~~a~~~~~~~~~~~~~ip~ 161 (262)
T 3b4t_A 82 ESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPL 161 (262)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTTBCHHHHCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCB
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhcCHhHCCCeEEEEEEEEEeCCCCHHHHHHHHHHHHHHHhhhhhccCCccccCCcc
Confidence 4 6778999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCeEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 173 YDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRS 249 (260)
Q Consensus 173 ~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~ 249 (260)
+++|+++|++++++.+|+|||.+||+.+++.++|++ +..|+|+++++.| .|+.+++.+++++|.++++++.+++++
T Consensus 162 ~~~v~avsvg~~~g~~l~Dpt~~Ee~~~~~~l~va~-~~~g~i~~i~~~g~~~~~~~~~l~~~l~~A~~~~~~i~~~~~~ 240 (262)
T 3b4t_A 162 SCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA-TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRD 240 (262)
T ss_dssp CSCEEEEEEEEETTEEEESCCHHHHTTCSEEEEEEE-ETTSCEEEEEECSSCCCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceeEEEEEEECCEEEECCCHHHHhccCceEEEEE-cCCCCEEEEEeeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985 6678999999986 699999999999999999999999999
Q ss_pred HHHHHhhh
Q 024906 250 CLKEAASD 257 (260)
Q Consensus 250 ~l~~~~~~ 257 (260)
+|++..++
T Consensus 241 ~l~~~~~~ 248 (262)
T 3b4t_A 241 ALALPYPG 248 (262)
T ss_dssp HHTSCCSS
T ss_pred HHhcchhc
Confidence 99876554
No 9
>3dd6_A Ribonuclease PH; exoribonuclease, tRNA maturation, RNAse PH., transferase; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-49 Score=347.28 Aligned_cols=225 Identities=23% Similarity=0.258 Sum_probs=208.5
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC--
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR-- 109 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~-- 109 (260)
+..+..|.|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|.+.+++...|++|+|+|+|+++|++++++
T Consensus 6 ~~~~~~~~~~R~~~e~R~i~i~~g~~~~A~GSa~v~~G~T~Vl~~V~~~~~~p~~~~~~~~g~l~v~~~~~P~a~~~~~~ 85 (255)
T 3dd6_A 6 HHHHHMRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVTAEYAMIPRATEQRTI 85 (255)
T ss_dssp -----CCCCSCCTTCCCCEEEEESCSSSSSEEEEEEETTEEEEEEEEEESCCCGGGTTSSCCEEEEEEEECTTSSSSCCC
T ss_pred ccccccccCCCCcCCCCCEEEEECCCCCCCeEEEEEECCeEEEEEEEecCCCCCCCCCCCceEEEEEEEECCCccccccc
Confidence 456778999999999999999999999999999999999999999999987666778899999999999999999863
Q ss_pred -----C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHc-----------CCcc
Q 024906 110 -----G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADA-----------GIMM 172 (260)
Q Consensus 110 -----g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~a-----------gip~ 172 (260)
| +++++.+++++|+++|+++|+++.||+|.|+|+++||++|||+++|+++|+++||+++ +|||
T Consensus 86 Re~~~g~~~~~~~eisrli~r~lr~~i~~~~l~~~~I~V~~~VL~~DG~~~~aai~aa~~AL~~a~~p~~~~g~~~~iPl 165 (255)
T 3dd6_A 86 RESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQADGGTRTASITGAYVAMVLAFEKLLQAEKVSKIPV 165 (255)
T ss_dssp CCCC-CCCCHHHHHHHHHHHHHHHHHBCHHHHCSCEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHTTSSSSCCB
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHhcChhhcCCeEEEEEEEEEECCCCHHHHHHHHHHHHHHHhhhhhhhcCcccCCCc
Confidence 5 6778999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCeEEEEEEEEeCCeEE-eCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 173 YDLVASVSVSCLGKNLL-IDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMR 248 (260)
Q Consensus 173 ~~~~~avt~~~~~~~iv-~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~ 248 (260)
+++|+++|+|++++.++ +|||..|++.+++.++|+ ++..|+|+++++.| .|+.+++.+++++|.++++++.++++
T Consensus 166 ~~~v~avsvg~i~g~~vllDpt~~Ee~~~~~~l~Va-~~~~g~i~~vq~~g~~~~~~~~~l~~~l~~A~~~~~~i~~~~~ 244 (255)
T 3dd6_A 166 KDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVI-MTGKGQFVEVQGTGEEATFSRAQLNELLDAAEQGIFQLIDIQK 244 (255)
T ss_dssp SSCEEEEEEEEETTTEEEESCCHHHHHTEEEEEEEE-EETTSCEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceeEEEEEEECCEEEEeCCCHHHHhhcCceEEEE-EcCCCcEEEEEecCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888 999999999999999998 67889999999986 69999999999999999999999999
Q ss_pred HHHHHHhhh
Q 024906 249 SCLKEAASD 257 (260)
Q Consensus 249 ~~l~~~~~~ 257 (260)
+++++..++
T Consensus 245 ~~l~~~~~~ 253 (255)
T 3dd6_A 245 EALGDIVSH 253 (255)
T ss_dssp HHHGGGGGG
T ss_pred HHHHHHHhh
Confidence 999887664
No 10
>1oys_A Ribonuclease PH; transferase, tRNA processing; 2.40A {Bacillus subtilis} SCOP: d.14.1.4 d.101.1.1 PDB: 1oyp_A 1oyr_A
Probab=100.00 E-value=3.7e-50 Score=349.56 Aligned_cols=219 Identities=21% Similarity=0.239 Sum_probs=189.8
Q ss_pred CCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC-------
Q 024906 37 LRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR------- 109 (260)
Q Consensus 37 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~------- 109 (260)
.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|...+++...+++|+++++|+++||+++++
T Consensus 1 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~p~~~~~~~~g~l~~~~~~~p~a~~~~~~Re~~~ 80 (245)
T 1oys_A 1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWITAEYSMLPQATNQQTIQESSK 80 (245)
T ss_dssp CCTTSCCTTCCCCEEEECC-----CCCEEEEETTEEEEEEEEEESCCCGGGTTSCCCEEEEEEEC---------------
T ss_pred CCCCCCCCCCcCCeEEEeCCCCCCCEEEEEEECCeEEEEEEEeccccCCccCCCCceEEEEEEEeCCCcCcccccccccC
Confidence 4999999999999999999999999999999999999999999987766667899999999999999999864
Q ss_pred C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC-----------CcccCeEE
Q 024906 110 G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAG-----------IMMYDLVA 177 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag-----------ip~~~~~~ 177 (260)
| ++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+| +||+++|+
T Consensus 81 G~~~~~~~eis~li~r~l~~~i~~~~l~~~~i~i~~~VL~~DG~~~~aai~aa~~AL~~a~~~~~~~~~~~~ipl~~~v~ 160 (245)
T 1oys_A 81 GKISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTIKTNPITDFLA 160 (245)
T ss_dssp ----CHHHHHHHHHHHHHHHTBCHHHHCSCEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHTTSSSSCCBCSCEE
T ss_pred CCCchHHHHHHHHHHHHHHHhcCHhHCCCEEEEEEEEEEeCCCCHHHHHHHHHHHHHHhccchhcccCcccccCCCCcee
Confidence 4 67789999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred EEEEEEeCCeEE-eCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 178 SVSVSCLGKNLL-IDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLKE 253 (260)
Q Consensus 178 avt~~~~~~~iv-~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~ 253 (260)
++|+|++++.++ +|||..||+.+++.++|++ +..|+|+.+++.| .|+.+++.+++++|.++++++.++++++|++
T Consensus 161 avs~g~~~g~~vl~Dp~~~Ee~~~~~~~~v~~-~~~g~i~~iq~~g~~~~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~ 239 (245)
T 1oys_A 161 AISVGIDKEQGILLDLNYEEDSSAEVDMNVIM-TGSGRFVELQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEVLGD 239 (245)
T ss_dssp EEEEEEETTTEEEESCCHHHHHHEEEEEEEEE-ETTSCEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEEEEECCEEEEecCCHHHHhcCCCcEEEEE-cCCCcEEEEEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998888 9999999999999999985 7789999999986 6999999999999999999999999999987
Q ss_pred Hhh
Q 024906 254 AAS 256 (260)
Q Consensus 254 ~~~ 256 (260)
+.+
T Consensus 240 ~~~ 242 (245)
T 1oys_A 240 SLP 242 (245)
T ss_dssp ---
T ss_pred hhh
Confidence 743
No 11
>2nn6_D Exosome complex exonuclease RRP46; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=2.6e-49 Score=342.69 Aligned_cols=221 Identities=21% Similarity=0.258 Sum_probs=188.7
Q ss_pred CCCCCCCCCCCCCC----CCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCccc
Q 024906 32 SDVDWLRPDSRGFH----QCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATP 107 (260)
Q Consensus 32 ~~~~~~R~DGR~~~----e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~ 107 (260)
.+.++.|+|||.++ |+|++++++|++++++|||+|++|+|+|+|+|++|.+.+++.+.+++|+++++| .|+..
T Consensus 11 ~~~~~~R~DGR~~~~~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~g~~~~~~~~~~~~~g~l~~~~--~p~~g- 87 (237)
T 2nn6_D 11 AKIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVIL--RPKIG- 87 (237)
T ss_dssp ----------------CCCCCCEEEEESCCSSSSEEEEEEETTEEEEEEEEEEEECC------CCEEEEEEE--ECSSS-
T ss_pred CCccCccCCCCCCCCccccccceEEEeCCCCCCCEEEEEEECCcEEEEEEeCCCcccccccCCCcEEEEEEe--cCCCC-
Confidence 45678999999999 999999999999999999999999999999999999877777889999888765 56632
Q ss_pred CCCCCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe-CC
Q 024906 108 VRGQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL-GK 186 (260)
Q Consensus 108 ~~g~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~-~~ 186 (260)
.++.++++++++|+++|+++++++.||+|.|+|+++||++|||+++|++||+++||+|+||||+++|+++|+|++ ++
T Consensus 88 --~~~~~e~~~~~li~r~l~~~i~~~~~p~~~I~I~~~VL~~dG~~~~aai~aa~~AL~da~iP~~~~v~avs~g~~~~~ 165 (237)
T 2nn6_D 88 --LPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVACALDSDG 165 (237)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHCGGGCSSSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHTTCCCSSCEEEEEEEECTTC
T ss_pred --CCCccHHHHHHHHHHHHHHHhchhcCCceEEEEEEEEEECCCcHHHHHHHHHHHHHHHcCCCcccCeeeEEEEEecCC
Confidence 167889999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024906 187 NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASD 257 (260)
Q Consensus 187 ~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~ 257 (260)
.+++||+..||+.+.+.++|++.++.++|+.+++.|.|+.++|.+++++|.++++++.++++++|+++.++
T Consensus 166 ~~llDp~~~Ee~~~~~~~~v~~~~~~~~i~~lq~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~ 236 (237)
T 2nn6_D 166 TLVLDPTSKQEKEARAVLTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSK 236 (237)
T ss_dssp CEEESCCHHHHHHCSEEEEEEEETTTCCCCEEEEEESCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cEEeCCCHHHHhccCCceEEEEcCCCCCEEEEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999987766699999999999999999999999999999999999999988654
No 12
>1r6l_A Ribonuclease PH; beta-alpha-beta-alpha fold, hexamer, phosphate bound, transf; HET: NHE; 1.90A {Pseudomonas aeruginosa} SCOP: d.14.1.4 d.101.1.1 PDB: 1r6m_A
Probab=100.00 E-value=4.6e-49 Score=341.46 Aligned_cols=215 Identities=24% Similarity=0.290 Sum_probs=200.7
Q ss_pred CCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC-------
Q 024906 37 LRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR------- 109 (260)
Q Consensus 37 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~------- 109 (260)
.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|...+++...+++|+|+|+|++.|++++++
T Consensus 2 ~R~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~p~~~~~~~~g~l~v~~~~~p~~~~~r~~Re~~~ 81 (239)
T 1r6l_A 2 NRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASR 81 (239)
T ss_dssp CCTTCCCTTCCCCEEEESSCSSSSSEEEEEEETTEEEEEEEEEEESCSSCCC---CCEEEEEEEECTTSSSSCCCCHHHH
T ss_pred cCCCCCCCCCcCCeEEEeCCcCCCCeEEEEEECCEEEEEEEEccCccCCccCCCCcEEEEEEEEeCCCccccccccccCC
Confidence 4999999999999999999999999999999999999999999987655555689999999999999999865
Q ss_pred C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC-----------CcccCeEE
Q 024906 110 G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAG-----------IMMYDLVA 177 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag-----------ip~~~~~~ 177 (260)
| +++++++++++|+++|+++|+++.||+++|+|+++||++|||+++|++||+++||+|+| |||+++|+
T Consensus 82 G~~~~~~~~isrli~r~l~~~i~~~~l~~~~i~I~~~VL~~DG~~~~aai~aa~~AL~da~~~~~~~~~~~~ip~~~~~~ 161 (239)
T 1r6l_A 82 GKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVA 161 (239)
T ss_dssp TSCCHHHHHHHHHHHHHHHHTBCGGGTCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCBCCCEE
T ss_pred CCCcHHHHHHHHHHHHHHHHhcCHHHcCCeEEEEEEEEEeCCCCHHHHHHHHHHHHHHHhcchhcccCcccccCccCcee
Confidence 5 67789999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred EEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 178 SVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLK 252 (260)
Q Consensus 178 avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~ 252 (260)
++|++++++.+++|||.+||+.+++.++|++ +..|+++.+++.| .++.+++.+++++|.++++++.++++++++
T Consensus 162 avs~g~~~~~~l~Dpt~~Ee~~~~~~l~va~-~~~g~i~~~~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~~~~~~l~ 238 (239)
T 1r6l_A 162 AVSVGIYQGVPVLDLDYLEDSAAETDLNVVM-TDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALA 238 (239)
T ss_dssp EEEEEEETTEEEESCCHHHHHHCSEEEEEEE-ETTSCEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECCEEEECCCHHHHhcCCceEEEEE-eCCCCEEEEEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999985 6778999999985 699999999999999999999999999885
No 13
>1udn_A Ribonuclease PH, RNAse PH; transferase, riken structural genomics/proteomics initiative structural genomics; 2.30A {Aquifex aeolicus} SCOP: d.14.1.4 d.101.1.1 PDB: 1udq_A 1uds_A 1udo_A
Probab=100.00 E-value=3.4e-49 Score=345.35 Aligned_cols=216 Identities=23% Similarity=0.289 Sum_probs=203.6
Q ss_pred CCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC-------
Q 024906 37 LRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR------- 109 (260)
Q Consensus 37 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~------- 109 (260)
+|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|++|...+++...+++|+|+++|+++|++++++
T Consensus 1 ~R~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~p~~~~~~~~g~l~~~~~~~P~a~~~r~~Re~~~ 80 (255)
T 1udn_A 1 MRSDGRKEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPNWLKGKGQGWITAEYSMLPRATQQRTIRESVQ 80 (255)
T ss_dssp -CTTSCCTTCCCCEEEEECCSSSSSEEEEEEETTEEEEEEEEEESCCCGGGTTSSCCEEEEEEEECSCCTTSCCCCSSTT
T ss_pred CCCCCCCCCCccCeEEEECCCCCCCEEEEEEECCEEEEEEEEcCCcCCCCCCCCCceEEEEEEEcCCCccccccccccCC
Confidence 4999999999999999999999999999999999999999999987765666789999999999999998865
Q ss_pred C-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC-----------CcccCeEE
Q 024906 110 G-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAG-----------IMMYDLVA 177 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag-----------ip~~~~~~ 177 (260)
| ++.++++++++|+++|+++|+++.||++.|+|+++||++|||+++|+++|+++||+|+| |||+++|+
T Consensus 81 G~~~~~~~eisrli~r~lr~~i~~~~l~~~~i~I~~~VL~~DG~~~~aai~aa~~AL~da~~~~~~~~~~~~ipl~~~v~ 160 (255)
T 1udn_A 81 GRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDVIQADGGTRTAAITGAFVAVADAIIKLHKEGIIEETPIKDFVA 160 (255)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHBCGGGGCSCEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHTTSSSSCCBCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCHHHcCCeEEEEEEEEEeCCCCHHHHHHHHHHHHHHhhcchhcccCcccCCCccCcee
Confidence 4 56789999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred EEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 178 SVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLKE 253 (260)
Q Consensus 178 avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~ 253 (260)
++|++++++.+++|||.+||+.+++.++|++ +..|+++.+++.| .|+.+++.+++++|.+++++++++++++|++
T Consensus 161 avsvg~~~g~~llDpt~~Ee~~~~~~l~va~-~~~g~i~~~q~~g~~~~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~ 238 (255)
T 1udn_A 161 AVSVGIVNDRILLDLNFEEDSAAQVDMNVVG-TGSGRLSEVHTMGEEYSFTKDELIKMLDLAQKGINELIELQKKLYVI 238 (255)
T ss_dssp EEEEEEETTEEEESCCHHHHHTCSEEEEEEE-ETTSCEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred EEEEEEECCEEEECCCHHHHhhCCCCEEEEE-eCCCCEEEEEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999985 6778999999985 6999999999999999999999999998865
No 14
>2po1_B Probable exosome complex exonuclease 2; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_B* 2pnz_B 2po2_B*
Probab=100.00 E-value=1.5e-47 Score=338.76 Aligned_cols=220 Identities=23% Similarity=0.366 Sum_probs=203.1
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEE-cccccccccCCCceeEEEEEEEeecCcccC--
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVF-GPRESKKAMMYSNIGRLNCNVSYTTFATPV-- 108 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~-gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~-- 108 (260)
+.++++|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+ ++.+ |+.+.|++|+++++|+++||+++.
T Consensus 21 ~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~--p~~~~~~~g~l~~~~~~~p~a~~~~~ 98 (277)
T 2po1_B 21 LLKEGKRIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGIKTSLGE--PFPDTPNMGVMTTNVELVPLASPTFE 98 (277)
T ss_dssp HHHTTCCTTSCCTTCCCCEEEEECCSTTSSEEEEEEETTEEEEEEEEEEEEC--CCTTCTTSCEEEEEEEECGGGCTTCC
T ss_pred HHhcCCCCCCCCCCCcCCeEEEeCCcCCCCeEEEEEECCeEEEEEEEecccC--CCCCCCCceEEEEEEEeCCCcccccc
Confidence 55789999999999999999999999999999999999999999999 5543 356789999999999999999875
Q ss_pred CC-CCccHHHHHHHHHHHHHh--hhccCCC---C-C--cEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC----------
Q 024906 109 RG-QGSDHKDFSSMLHKALEG--AIILETF---P-K--TTVDVFALVLESGGSDLPVVISCASVALADAG---------- 169 (260)
Q Consensus 109 ~g-~~~~~~~l~~~L~~~l~~--~i~le~~---p-k--~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag---------- 169 (260)
+| ++.++++++++|+++|++ +||+++| | + |.|+|+++||++|||+++|+++|+++||+|+|
T Consensus 99 ~g~~~~~~~~l~~li~r~l~~s~~idl~~L~i~pg~~~w~i~id~~VL~~dG~~~~a~i~aa~~AL~da~~p~~~~~~~~ 178 (277)
T 2po1_B 99 PGPPDERAIELARVIDRGIRESKALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGIAAIAALLNARVPKVRYNEET 178 (277)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTSBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHHCEEEEEEECTTT
T ss_pred CCCCChHHHHHHHHHHHHHhhcccccHHHccccCCcEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhcCCCcEEEeCCC
Confidence 34 778999999999999998 6999998 4 3 47788899999999999999999999999999
Q ss_pred -----------CcccCeEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHHHHHHHHH
Q 024906 170 -----------IMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHFNEAMQLC 236 (260)
Q Consensus 170 -----------ip~~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l~~~l~~A 236 (260)
+||+++|+++|++++++.+++|||..||..+++.++|++ +..|+|+.+++.| .|+.++|.+++++|
T Consensus 179 ~~~~~~~~~~~ipl~~~~~avs~g~~~~~~l~Dp~~~Ee~~~~~~~~v~~-~~~g~i~~lq~~g~~~~~~~~l~~~l~~A 257 (277)
T 2po1_B 179 GEVETLDETEPLPVEKIPVPVTFAKIGNILVVDPSLDEELVMDGKITITT-DETGHISAVQKSEGGAFKLEEVMYAVETA 257 (277)
T ss_dssp CCEEEEEEEEECCBCCCCEEEEEEEETTEEEESCCHHHHHHCSEEEEEEE-CTTSCEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred ceeecccccccccccCceEEEEEEEECCEEEeCCCHHHHhhCCCcEEEEE-cCCCCEEEEEccCCCCCCHHHHHHHHHHH
Confidence 899999999999999999999999999999999999985 6679999999994 79999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 024906 237 LDASAKLGKIMRSCLKEA 254 (260)
Q Consensus 237 ~~~~~~i~~~i~~~l~~~ 254 (260)
.+++++++++++++|++.
T Consensus 258 ~~~~~~l~~~~~~~l~~~ 275 (277)
T 2po1_B 258 FKKAEEIRKLILEAVEKA 275 (277)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999875
No 15
>2je6_A RRP42, exosome complex exonuclease 2; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_A* 2jeb_A* 2br2_A 2c37_A* 2c38_A* 2c39_A* 3l7z_A
Probab=100.00 E-value=1e-46 Score=333.34 Aligned_cols=226 Identities=22% Similarity=0.242 Sum_probs=204.4
Q ss_pred CCCcc-cCCCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeec
Q 024906 25 RPPIF-SGSDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTT 103 (260)
Q Consensus 25 ~~~~~-~~~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p 103 (260)
.|..| .++.++++|+|||.++|+|++.+++|.+++++|||+|++|+|+|+|+|+++... |+.+.+++|+|+|+|+++|
T Consensus 16 ~~~~~i~~~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~-p~~~~~~~g~l~v~~~~~p 94 (277)
T 2je6_A 16 IKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDK-PYEDTPNQGNLIVNVELLP 94 (277)
T ss_dssp HHHHHHTTTGGGTBCTTSCBTTCCCCEEEEETCSTTSSEEEEEEETTEEEEEEEEEEEEC-CCTTCTTCCEEEEEEEECT
T ss_pred cHHHHHHHHHhcCCCCCCCCcCcccCeEEEeCCcCCCCeEEEEEECCeEEEEEEEeeeeC-CCCCCCCccEEEEEEEeCC
Confidence 34444 347789999999999999999999999999999999999999999999955432 3556799999999999999
Q ss_pred CcccCC--C-CCccHHHHHHHHHHHHHh--hhccCCC----C--CcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC---
Q 024906 104 FATPVR--G-QGSDHKDFSSMLHKALEG--AIILETF----P--KTTVDVFALVLESGGSDLPVVISCASVALADAG--- 169 (260)
Q Consensus 104 ~~~~~~--g-~~~~~~~l~~~L~~~l~~--~i~le~~----p--k~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag--- 169 (260)
|+++.+ | +++++.+++++|+++|++ +|+++.| + .|.|+|+++||++|||+++|+++|+++||+++|
T Consensus 95 ~a~~~~~~g~~~~~~~~is~li~r~lr~~~~i~~~~l~i~~g~~~~~i~i~~~VL~~DG~~~~aai~aa~~AL~~a~~p~ 174 (277)
T 2je6_A 95 LAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYK 174 (277)
T ss_dssp TSCTTCCCSSCCHHHHHHHHHHHHHHHHTTCSCGGGGEEETTTEEEEEEEEEEEEECCSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCcccccCCCChHHHHHHHHHHHHHhccCCcCHHHceeecCceEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhcCCCe
Confidence 999864 4 778999999999999998 5999998 2 357788899999999999999999999999999
Q ss_pred ------------------CcccCeEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHH
Q 024906 170 ------------------IMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHF 229 (260)
Q Consensus 170 ------------------ip~~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l 229 (260)
+||+++|+++|+|++++.+++|||.+||+.+++.++|++ +..|+|+++++.| .++.+++
T Consensus 175 v~~~~~~~~~~~~~~~~~ip~~~~~~avsvg~~~~~~l~Dpt~~Ee~~~~~~l~va~-~~~g~i~~v~~~g~~~~~~~~l 253 (277)
T 2je6_A 175 VEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSY-TPDLKIVGIQKSGKGSMSLQDI 253 (277)
T ss_dssp EECC---CEEEEEEEEEECCCSCCCEEEEEEEETTEEEESCCHHHHHHCSEEEEEEE-CTTCCEEEEEEESSSCEEHHHH
T ss_pred EEecCCcceEeccCccccccccCCeEEEEEEEECCEEecCCCHHHHhcCCCcEEEEE-eCCCCEEEEECCCCCCCCHHHH
Confidence 999999999999999999999999999999999999985 6668999999995 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 024906 230 NEAMQLCLDASAKLGKIMRSCLK 252 (260)
Q Consensus 230 ~~~l~~A~~~~~~i~~~i~~~l~ 252 (260)
.+++++|.++++++.++++++++
T Consensus 254 ~~~l~~A~~~~~~i~~~~~~~l~ 276 (277)
T 2je6_A 254 DQAENTARSTAVKLLEELKKHLG 276 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999874
No 16
>3hkm_A OS03G0854200 protein; RNAse PH domain, phosphorylase, hydrolase; 1.98A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-46 Score=327.56 Aligned_cols=215 Identities=24% Similarity=0.361 Sum_probs=184.5
Q ss_pred CCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCCC-CCc
Q 024906 35 DWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVRG-QGS 113 (260)
Q Consensus 35 ~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~g-~~~ 113 (260)
++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+||.+.++..+.++++.+++ +++|+ .| ++.
T Consensus 2 eg~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~g~~~~~~~~~~~~~~~~~~--~~~P~----~g~~~~ 75 (246)
T 3hkm_A 2 EESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKASIEV--VWKPM----TGQIGK 75 (246)
T ss_dssp ---CTTSCCTTCCCCEEEEECCCSSSSEEEEEEETTEEEEEEECCCEECCCTTSCSSSCEEEE--EEECS----SSCCCT
T ss_pred CCcCCCCCCCCCcCCeEEEECCCCCCCeEEEEEECCeEEEEEEecCcCCCcccCCCccEEEEE--EeCCC----CCCCCh
Confidence 578999999999999999999999999999999999999999999876556667788887765 45663 44 667
Q ss_pred cHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe-CCeEEeCC
Q 024906 114 DHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL-GKNLLIDP 192 (260)
Q Consensus 114 ~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~-~~~iv~DP 192 (260)
++++++++|++.|+++++++.||++.|+|+++||++|||+++|+++|+++||+|+||||+++++++++|++ ++.+|+||
T Consensus 76 ~~~e~~~li~r~l~~l~~~~~~~~~~I~v~~~VL~~dG~~~~aai~aa~~AL~dagiP~~~~v~avs~g~~~~g~~llDp 155 (246)
T 3hkm_A 76 QEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAINACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDT 155 (246)
T ss_dssp THHHHHHHHHHHHHHHBCTTSSCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHHTCCBSSCEEEEEEEECTTSCEEESC
T ss_pred hHHHHHHHHHHHHHHhcCccCCCcEEEEEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEEECCEEEECC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998 88999999
Q ss_pred ChhhhhcCCeeEEEEEcCCCCcEEEEEE------------------ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 193 VLEEESYQDGSLMIACMPSRYEVTQLTV------------------TGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEA 254 (260)
Q Consensus 193 t~~Ee~~~~~~~~va~~~~~~~i~~i~~------------------~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~ 254 (260)
|..|++.+++.++|++. .. .++.+++ .|.|+.+++.+++++|.++++++.++|+++|+++
T Consensus 156 t~~Ee~~~~~~~~va~~-~~-~i~~lq~~g~~~~~~~~~~~i~~~~~g~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~ 233 (246)
T 3hkm_A 156 NKAEEQQLKSFAHLVFP-NS-RKSASSKEPNQKEEDSERGLITSITHGVMSEEDYFSCIERGLAASSRISDFMRTTLQKQ 233 (246)
T ss_dssp CHHHHTTCSEEEEEEEE-C---------------------CCCEEEEECEEHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CHHHHhcCCeeEEEEEe-CC-ceEEEeecccccccccccceeeeeccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999864 33 3555554 5689999999999999999999999999999877
Q ss_pred hhh
Q 024906 255 ASD 257 (260)
Q Consensus 255 ~~~ 257 (260)
.++
T Consensus 234 ~~~ 236 (246)
T 3hkm_A 234 APG 236 (246)
T ss_dssp ---
T ss_pred hhc
Confidence 654
No 17
>3m7n_G Probable exosome complex exonuclease 2; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_H 2ba0_I 3m85_G
Probab=100.00 E-value=7e-47 Score=331.43 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=198.0
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccC--C
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPV--R 109 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~--~ 109 (260)
+.++++|+|||.++|+|++++++|.+++++|||+|++|+|+|+|+|+++... |+.+.|++|+++++|+++||+++. +
T Consensus 17 ~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~-p~~~~~~~g~l~v~~~~~p~a~~~~~~ 95 (259)
T 3m7n_G 17 KLRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGE-PYPDTPDRGVIIVNAELVPLASPTFEP 95 (259)
T ss_dssp HHHTTCCTTCCCTTCCCCEEEEETSSTTSSEEEEEEETTEEEEEEEEEEEEC-CCSSCTTSCEEEEEEECCTTSCTTCCS
T ss_pred HHhcCCCCCCCCCccccCeEEEeCCcCCCCceEEEEECCcEEEEEEEecccC-CCCCCCCceEEEEEEEeCCcccccccC
Confidence 4568999999999999999999999999999999999999999999976543 456678999999999999999885 3
Q ss_pred C-CCccHHHHHHHHHHHHHh--hhccCCC---C-C--cEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCC----------
Q 024906 110 G-QGSDHKDFSSMLHKALEG--AIILETF---P-K--TTVDVFALVLESGGSDLPVVISCASVALADAGI---------- 170 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~--~i~le~~---p-k--~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agi---------- 170 (260)
| +++++.+++++|++.|++ +|++++| | + |.|+|+++||++|||+++|+++|+++||++++|
T Consensus 96 g~~~~~~~~~srli~r~lr~s~~i~l~~L~i~pg~~~~~i~i~~~VL~~DG~~~~aai~aa~~AL~~a~iP~~~~~~~~~ 175 (259)
T 3m7n_G 96 GPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGED 175 (259)
T ss_dssp SSSCHHHHHHHHHHHHHHHHTTCBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHTCEECTGGGTSSSC
T ss_pred CCCChHHHHHHHHHHHHHhhcCCccHHHhcccCCcEEEEEEEEEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEecCCce
Confidence 4 778999999999999999 8999998 6 4 677888999999999999999999999999999
Q ss_pred ---cccCeEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHHHHHHHHHHHHHHHHHH
Q 024906 171 ---MMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHFNEAMQLCLDASAKLGK 245 (260)
Q Consensus 171 ---p~~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l~~~l~~A~~~~~~i~~ 245 (260)
||+++|+++|+|++++.+++|||.+||+.+++.++|++ +..|+++++++.| .++.+++.+++++|.++++++.+
T Consensus 176 ~~lp~~~~~~avtvg~~~~~~l~Dpt~~Ee~~~~~~l~va~-~~~g~i~~i~~~g~~~~~~~~l~~~l~~a~~~~~~l~~ 254 (259)
T 3m7n_G 176 YLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITT-DKDDNVVAMQKSGGYLLDEKLFDELLDVSINCARKLRE 254 (259)
T ss_dssp EECCBCCCCEEEEEEEETTEEEESCCTTGGGGCSCEEEEEE-CTTSCEEEEEEESSCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCceeEEEEEEECCEEEECCCHHHHhhCCCcEEEEE-eCCCcEEEEECCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999985 6678999999985 79999999999999999999999
Q ss_pred HHHH
Q 024906 246 IMRS 249 (260)
Q Consensus 246 ~i~~ 249 (260)
+|++
T Consensus 255 ~~~~ 258 (259)
T 3m7n_G 255 KFKE 258 (259)
T ss_dssp TTC-
T ss_pred HHhh
Confidence 8764
No 18
>2wnr_A Probable exosome complex exonuclease 2; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=2.9e-46 Score=329.50 Aligned_cols=218 Identities=19% Similarity=0.272 Sum_probs=199.8
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEc-ccccccccCCCceeEEEEEEEeecCcccCC-
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFG-PRESKKAMMYSNIGRLNCNVSYTTFATPVR- 109 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~g-p~~~~~~~~~~~~g~l~v~v~~~p~~~~~~- 109 (260)
+.++++|+|||.++|+|++++++|.+++++|||+|++|+|+|+|+|+. +.+ |+.+.+++|+|+|+|+++||+++.+
T Consensus 19 ~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~--p~~~~~~~g~l~v~~~~~p~a~~~~~ 96 (271)
T 2wnr_A 19 LINNKERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGE--PFPDTPEMGVILTNSELLPMASPTFE 96 (271)
T ss_dssp HHHTTCCTTCCCTTCCCCEEEEESCSTTSSEEEEEEETTEEEEEEEEEEEEC--CCTTCTTCCEEEEEEEECGGGCTTCC
T ss_pred HHhcCCCCCCCCcccccCeEEEeCccCCCCeEEEEEECCeEEEEEEEeeeec--CCCCCCCceEEEEEEEeCCccccccc
Confidence 557899999999999999999999999999999999999999999994 443 3556799999999999999999863
Q ss_pred -C-CCccHHHHHHHHHHHHHh--hhccCCC---C-C--cEEEEEEEEEcCCCccHhHHHHHHHHHHHHcC----------
Q 024906 110 -G-QGSDHKDFSSMLHKALEG--AIILETF---P-K--TTVDVFALVLESGGSDLPVVISCASVALADAG---------- 169 (260)
Q Consensus 110 -g-~~~~~~~l~~~L~~~l~~--~i~le~~---p-k--~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~ag---------- 169 (260)
| +++++.+++++|+++|++ +|+++.| | + |.|+|+++||++|||+++|+++|+++||+++|
T Consensus 97 ~g~~~~~~~~~s~li~r~lr~s~~i~l~~l~i~pg~~~~~i~i~~~VL~~DG~~~~aai~aa~~AL~~a~~p~~~~~~~~ 176 (271)
T 2wnr_A 97 PGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGE 176 (271)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHHCEEEEEEEETTE
T ss_pred CCCCchHHHHHHHHHHHHHhccCCccHHHccccCCcEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhcCCCeEEecCCc
Confidence 4 778999999999999998 6999998 4 3 47788899999999999999999999999999
Q ss_pred ----------CcccCeEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHHHHHHHHHH
Q 024906 170 ----------IMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHFNEAMQLCL 237 (260)
Q Consensus 170 ----------ip~~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l~~~l~~A~ 237 (260)
+||+++|+++|+|++++.+++|||.+||+.+++.++|++ +..|+|+++++.| .++.+++.+++++|.
T Consensus 177 ~~~~~~~~~~ip~~~~~~avt~g~~~~~~l~Dpt~~Ee~~~~~~l~va~-~~~~~i~~i~~~g~~~~~~~~l~~~l~~a~ 255 (271)
T 2wnr_A 177 VVINREKMQPLPVNRKALMCTFAKIGNEIVLDPSLEEEDILTARISIGV-TEEGSICAMQKGGEGPLTRDDVLKAVSIAV 255 (271)
T ss_dssp EEEEEEEEEECCBCCCEEEEEEEEETTEEEESCCHHHHTTCSEEEEEEE-ETTSCEEEEEEESSSCBCHHHHHHHHHHHH
T ss_pred eeeccCcccccCccCCeEEEEEEEECCEEEeCCCHHHHhcCCCcEEEEE-eCCCCEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985 5668999999985 799999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 024906 238 DASAKLGKIMRSCLK 252 (260)
Q Consensus 238 ~~~~~i~~~i~~~l~ 252 (260)
++++++.++++++++
T Consensus 256 ~~~~~i~~~~~~~l~ 270 (271)
T 2wnr_A 256 EKVPQLIEYLDKSMT 270 (271)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999874
No 19
>2nn6_C Exosome complex exonuclease RRP43; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=5.1e-47 Score=335.42 Aligned_cols=230 Identities=21% Similarity=0.278 Sum_probs=207.5
Q ss_pred CCCCCcccC-CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEe
Q 024906 23 KTRPPIFSG-SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSY 101 (260)
Q Consensus 23 ~~~~~~~~~-~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~ 101 (260)
...|..|.. +.++++|+|||.++|+|++.+++|.+++++|||+|++|+|+|+|+|+++... |....+++|+|.|+|++
T Consensus 9 ~~~~~~~~~~~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~~~~~-p~~~~~~~g~l~v~~~~ 87 (278)
T 2nn6_C 9 TVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAA-PSTDAPDKGYVVPNVDL 87 (278)
T ss_dssp CCSTHHHHHHHHHTSCCTTSCCSCCCCSCCEEETCCSSSSEEEEEEETTEEEEEEEEEEECC-CCSSSTTCCCCEEEEEC
T ss_pred hhCHHHHHHHHHhcCCCCCCCCcccccCeEEEeCCccCCCceEEEEeCCeEEEEEEEEEeec-CCCCCCCccEEEEEEEe
Confidence 345555544 5688999999999999999999999999999999999999999999998764 34566899999999999
Q ss_pred ecCcccCC--C-CCccHHHHHHHHHHHHHh--hhccCCC---C---CcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCC
Q 024906 102 TTFATPVR--G-QGSDHKDFSSMLHKALEG--AIILETF---P---KTTVDVFALVLESGGSDLPVVISCASVALADAGI 170 (260)
Q Consensus 102 ~p~~~~~~--g-~~~~~~~l~~~L~~~l~~--~i~le~~---p---k~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agi 170 (260)
+||+++.+ | +++++++++++|+++|++ +|++++| | .|.|+|+++||++|||+++|+++|+++||+++||
T Consensus 88 ~p~a~~~~~~g~~~~~~~~~s~li~r~l~~s~~i~l~~L~i~pg~~~~~i~i~~~VL~~DG~~~~aai~aa~~AL~~a~i 167 (278)
T 2nn6_C 88 PPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQL 167 (278)
T ss_dssp CSSSCTTSCSSSCCHHHHHHHHHHHHHHHHHCCSCHHHHCSSBTTBCEEEEEEEEESSCCSCTTHHHHHHHHHHHHTCCC
T ss_pred CCccCccccCCCCcHHHHHHHHHHHHHHhccCCCCHHHCEEeCCcEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 99998863 4 677899999999999995 7898887 2 3578889999999999999999999999999996
Q ss_pred ----------------------cccCeEEEEEEEEeCC-eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCC
Q 024906 171 ----------------------MMYDLVASVSVSCLGK-NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWS 225 (260)
Q Consensus 171 ----------------------p~~~~~~avt~~~~~~-~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~ 225 (260)
||+++|+++|+|++++ .+++|||.+||..+++.++|++ +..|+|+++++.| .++
T Consensus 168 P~v~~~~~~~~~~~~~~~~~~lp~~~~~~avs~g~~~~~~~l~Dpt~~Ee~~~~~~l~va~-~~~g~i~~v~~~g~~~~~ 246 (278)
T 2nn6_C 168 PEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVM-DEEGKLCCLHKPGGSGLT 246 (278)
T ss_dssp CCCCBCSSSBCCCTTSCCCSCSCCSCCCEEEEEEECTTTCCEESCCTTTTTSCSEEEEEEE-CTTCCEEEEEESCCSCCC
T ss_pred CeEEEeCCCcceecCcccccccccCCceEEEEEEEECCceEEECCCHHHHhhcCceEEEEE-cCCCcEEEEEccCCCCCC
Confidence 7999999999999998 9999999999999999999985 6678999999998 799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 226 TPHFNEAMQLCLDASAKLGKIMRSCLKEA 254 (260)
Q Consensus 226 ~~~l~~~l~~A~~~~~~i~~~i~~~l~~~ 254 (260)
.+++.+++++|.++++++.+++++++++.
T Consensus 247 ~~~l~~~l~~a~~~~~~i~~~~~~~l~~~ 275 (278)
T 2nn6_C 247 GAKLQDCMSRAVTRHKEVKKLMDEVIKSM 275 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 20
>2nn6_A Polymyositis/scleroderma autoantigen 1; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=2.1e-45 Score=334.62 Aligned_cols=223 Identities=22% Similarity=0.238 Sum_probs=203.8
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC--
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR-- 109 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~-- 109 (260)
+.++++|+|||.++|+|++.+++| +++|||+|++|+|+|+|+|++|...+ ....|++|+|.++|+++|++++.+
T Consensus 34 ~L~~g~R~DGR~~~e~R~i~ie~g---~A~GSa~v~~G~T~VL~tV~~e~~~p-~~~~~~~g~l~~~v~~~p~a~~~~~~ 109 (358)
T 2nn6_A 34 AIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSP-KLNRATEGILFFNLELSQMAAPAFEP 109 (358)
T ss_dssp HHHTTCCTTSCCTTCCCCCEEEEC---SSTTEEEEESSSCEEEEEECCEEECC-CSTTTTSCCEEEEEEECTTTCSSCCS
T ss_pred HHhcCCCCCCCCccccCCeEEEEe---cCCcEEEEEECCcEEEEEEEecccCC-cccCCCCcEEEEEEEecCCccccccC
Confidence 457899999999999999999999 89999999999999999999998643 556689999999999999998864
Q ss_pred C-CCccHHHHHHHHHHHHHh--hhccCCC------CCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCc---------
Q 024906 110 G-QGSDHKDFSSMLHKALEG--AIILETF------PKTTVDVFALVLESGGSDLPVVISCASVALADAGIM--------- 171 (260)
Q Consensus 110 g-~~~~~~~l~~~L~~~l~~--~i~le~~------pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip--------- 171 (260)
| +++++++++++|+++|++ ++|++.| ++|.|+|+++||++|||+++|+++|+++||+++|+|
T Consensus 110 g~~s~~e~eisrli~r~Lr~s~~idl~~LcI~pg~~~w~I~Vdv~VL~~DGn~~dAai~Aa~aAL~da~iP~v~~~~~~v 189 (358)
T 2nn6_A 110 GRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 189 (358)
T ss_dssp SSTHHHHTHHHHHHHHHHHHHTCBCSSSSCSBTTTBEEEEEEEEEECSCCSCCHHHHHHHHHHHHHHCCCCCCBCCTTCC
T ss_pred CCCCHHHHHHHHHHHHHhhhccccchHhhcccCCCccEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHhCcCcEEeeCCee
Confidence 4 667889999999999998 5788876 356888899999999999999999999999999999
Q ss_pred --------------ccCeEEEEEEEEe--CCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHHHHHH
Q 024906 172 --------------MYDLVASVSVSCL--GKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHFNEAM 233 (260)
Q Consensus 172 --------------~~~~~~avt~~~~--~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l~~~l 233 (260)
|+++|+++|+|++ ++.+|+|||..||..+++.++|+ ++..|+|+++++.| .++.+++.+|+
T Consensus 190 ~i~~~~~~~~~~l~i~~~p~avsvgl~~~~~~illDPt~~Ee~~~~~~l~Va-~t~~g~I~~lqk~G~~~ls~~~l~~~l 268 (358)
T 2nn6_A 190 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIA-MNKHREICTIQSSGGIMLLKDQVLRCS 268 (358)
T ss_dssp BCCHHHHTSCCCCCBCCCEEEEEEEECTTTSSEEESCCHHHHHHCSCEEEEE-EETTTEEEEEEEESCCCCCHHHHHHHH
T ss_pred EecccccccccccCccCCEEEEEEEEEeeCCEEEECCCHHHHhhcCccEEEE-EcCCCeEEEEEeCCCCCCCHHHHHHHH
Confidence 8999999999988 78999999999999999999998 67788999999998 48999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 234 QLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 234 ~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
++|.+++++|.++++++|++...+|.
T Consensus 269 ~~A~~~~~~i~~~~~~~l~~~~~~r~ 294 (358)
T 2nn6_A 269 KIAGVKVAEITELILKALENDQKVRK 294 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhh
Confidence 99999999999999999998877653
No 21
>2wp8_A Exosome complex component RRP45; nucleus, hydrolase, RNA-binding, exonucle binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-45 Score=328.56 Aligned_cols=223 Identities=20% Similarity=0.201 Sum_probs=187.4
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccC--C
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPV--R 109 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~--~ 109 (260)
+.++++|+|||.++|+|++++++| +++|||+|++|+|+|+|+|+++... |..+.|++|.+.++|+++|++++. +
T Consensus 18 ~l~~~~R~DGR~~~e~R~i~i~~g---~a~GSa~v~~G~T~Vl~~V~~~~~~-p~~~~~~~g~~~~~ve~~~~~~~~~~~ 93 (305)
T 2wp8_A 18 ALRQNYRLDGRSFDQFRDVEITFG---KEFGDVSVKMGNTKVHCRISCQIAQ-PYEDRPFEGLFVISTEISPMAGSQFEN 93 (305)
T ss_dssp HHTTTCCTTSCCTTCCCCEEEEEC---SSTTEEEEEETTEEEEEEEEEEEC--CCSSCTTCCEEEEEECCC---------
T ss_pred HHhhCCCCCCCCCcccCCeEEEEc---CCCcEEEEEECCeEEEEEEeccccC-CcccCCCCcEEEEEEEECCCCCccccC
Confidence 557899999999999999999999 8999999999999999999999754 345678999999999999998875 3
Q ss_pred C-CC-ccHHHHHHHHHHHHH--hhhccCCC---C-C--cEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCc--------
Q 024906 110 G-QG-SDHKDFSSMLHKALE--GAIILETF---P-K--TTVDVFALVLESGGSDLPVVISCASVALADAGIM-------- 171 (260)
Q Consensus 110 g-~~-~~~~~l~~~L~~~l~--~~i~le~~---p-k--~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip-------- 171 (260)
| ++ .++++++++|+++|+ .+||++.| | + |.|+|+++||++|||+++|+++|+++||+++|+|
T Consensus 94 g~~~~~~~~~is~li~r~l~~s~~idl~~L~i~pg~~~w~I~id~~VL~~DG~~~dAai~aa~~AL~~a~iP~~~~~~~~ 173 (305)
T 2wp8_A 94 GNITGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITVHGEQ 173 (305)
T ss_dssp -------------CHHHHHHHTTSBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHHCEECCCBCTTSS
T ss_pred CCCChhHHHHHHHHHHHHHhhccCcCHHHccccCCcEEEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHhCCCeEEecCCc
Confidence 5 66 789999999999999 57999988 4 4 4578889999999999999999999999999999
Q ss_pred ---------------ccCeEEEEEEEEeC--------------CeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec
Q 024906 172 ---------------MYDLVASVSVSCLG--------------KNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG 222 (260)
Q Consensus 172 ---------------~~~~~~avt~~~~~--------------~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G 222 (260)
|+++|+++|+|+++ +.+|+|||..||..+++.++|++ +..|+|+.+++.|
T Consensus 174 ~~i~~~~~~~~~~l~~~~~pvavs~g~i~~~~~~~~~~~~~~~~~~l~Dpt~~Ee~~~~~~l~Va~-~~~g~i~~l~~~g 252 (305)
T 2wp8_A 174 IIVHPVNEREPVPLGILHIPICVTFSFFNPQDTEENIKGETNSEISIIDATLKEELLRDGVLTVTL-NKNREVVQVSKAG 252 (305)
T ss_dssp CCBCCSSSSCCEECCBSCCCEEEEEEECC---------------CEEESCCHHHHHHCSEEEEEEE-CTTSEEEEEEEEE
T ss_pred eEecccccccccccccccCeEEEEEEEEccccccccccccccCCeEEeCCCHHHHhccCCcEEEEE-cCCCcEEEEEecC
Confidence 77899999999997 78999999999999999999984 6778999999997
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 024906 223 --EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQ 259 (260)
Q Consensus 223 --~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~ 259 (260)
.|+.+++.+++++|.+++++|.++++++|+++.++|.
T Consensus 253 ~~~~~~~~l~~~l~~A~~~~~~i~~~~~~~l~~~~~~r~ 291 (305)
T 2wp8_A 253 GLPMDALTLMKCCHEAYSIIEKITDQILQLLKEDSEKRN 291 (305)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6999999999999999999999999999999888774
No 22
>2nn6_E Exosome complex exonuclease RRP42; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=100.00 E-value=8.6e-46 Score=331.60 Aligned_cols=225 Identities=24% Similarity=0.285 Sum_probs=203.0
Q ss_pred CCCCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCC-C
Q 024906 32 SDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVR-G 110 (260)
Q Consensus 32 ~~~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~-g 110 (260)
+.++++|+|||.++|+|++.+++|++++++|||+|++|+|+|+|+|+++... |+.+.|++|++.++|+++|++++.+ +
T Consensus 31 ~l~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vl~~V~~e~~~-p~~~~~~~g~l~~~v~~~p~a~~~~~~ 109 (305)
T 2nn6_E 31 GVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGT-PKLEKPNEGYLEFFVDCSASATPEFEG 109 (305)
T ss_dssp HHHTTCCSSSCCSSCCCCCEEEECCCTTSSSEEEEEETTEEEEEECCCCCSC-CCSSSCSSCCEEEECCCCTTTCSSCCT
T ss_pred HHhcCCCCCCCCCcCccCeEEEeCcccCCCcEEEEEECCeEEEEEEEEEeeC-CCcCCCCceEEEEEEEeCCCcCccccC
Confidence 5578999999999999999999999999999999999999999999998753 5667899999999999999998753 2
Q ss_pred --CCccHHHHHHHHHHHHHh--hhccCCC---CC---cEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccC------
Q 024906 111 --QGSDHKDFSSMLHKALEG--AIILETF---PK---TTVDVFALVLESGGSDLPVVISCASVALADAGIMMYD------ 174 (260)
Q Consensus 111 --~~~~~~~l~~~L~~~l~~--~i~le~~---pk---~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~------ 174 (260)
+++++.+++++|++.|++ +||+++| |+ |.|+|+++||++|||+++|+++|+++||+++++|+.+
T Consensus 110 r~~~~~~~~isrli~r~lr~s~~idl~~L~i~p~~~~w~i~idv~VL~~DG~~~daai~aa~~AL~~a~iP~~~~~~~~~ 189 (305)
T 2nn6_E 110 RGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEE 189 (305)
T ss_dssp TSTHHHHHHHHHHHHHHHHHSCCSCSSSSCSSTTTCCCCEEEEEEECCCCSSHHHHHHHHHHHTTTTCCCCEEEEECC--
T ss_pred CCCchHHHHHHHHHHHHHhhcCcccHHHheeccCcEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHhcCCCeEEEecCCC
Confidence 346889999999999998 7999954 53 4588999999999999999999999999999999654
Q ss_pred ---------------------eEEEEEEEEeCCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec--CCCHHHHHH
Q 024906 175 ---------------------LVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG--EWSTPHFNE 231 (260)
Q Consensus 175 ---------------------~~~avt~~~~~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G--~~~~~~l~~ 231 (260)
+|+++|+|++++.+|+|||.+||..+++.++|+ ++..|+|+++++.| .++.+++.+
T Consensus 190 ~~~~i~~~~d~~~~~~l~l~~~p~avt~g~i~~~~l~Dpt~~Ee~~~~~~l~Va-~~~~g~i~~i~~~g~~~l~~~~l~~ 268 (305)
T 2nn6_E 190 GSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVS-VTSKGVVTCMRKVGKGSLDPESIFE 268 (305)
T ss_dssp ----EEEEESSCCCSCCCCTTCCCCEEEEESSSSEESSCCHHHHTSCSEEEEEC-CCSSSCCCEEEEEESSCBCHHHHHH
T ss_pred CceeeeccCcccccccccccCceEEEEEEEECCEEEECCCHHHHhhcCCcEEEE-EcCCCCEEEEEccCCCCCCHHHHHH
Confidence 477999999999999999999999999999998 46668999999998 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 024906 232 AMQLCLDASAKLGKIMRSCLKEAASDE 258 (260)
Q Consensus 232 ~l~~A~~~~~~i~~~i~~~l~~~~~~~ 258 (260)
++++|.++++++.+++++++++....+
T Consensus 269 ~l~~A~~~~~~i~~~~~~~l~~~~~~~ 295 (305)
T 2nn6_E 269 MMETGKRVGKVLHASLQSVVHKEESLG 295 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999887643
No 23
>3gme_A Polyribonucleotide nucleotidyltransferase; protein-RNA complex, cytoplasm, nucleotidyltransferase, RNA- binding, transferase, hydrolase; 2.40A {Escherichia coli E24377A} PDB: 3gll_A 3gcm_A 3h1c_A 3cdj_A
Probab=100.00 E-value=5e-42 Score=325.07 Aligned_cols=217 Identities=20% Similarity=0.258 Sum_probs=190.6
Q ss_pred CCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEE-Ecccccc---cccCCCceeEEEEEEEeecCcccCC
Q 024906 34 VDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSV-FGPRESK---KAMMYSNIGRLNCNVSYTTFATPVR 109 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V-~gp~~~~---~~~~~~~~g~l~v~v~~~p~~~~~~ 109 (260)
+++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+| .||.+.. ++...+++|++.++|+|+||+++++
T Consensus 311 ~~g~R~DGR~~~elRpi~i~~g~l~~a~GSal~~~G~T~Vl~~Vt~gp~~~~~~~~~l~~~~~g~~~~~y~~~P~st~e~ 390 (549)
T 3gme_A 311 AGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGET 390 (549)
T ss_dssp HTCCCTTSCCTTCCCCEEEEECCCSSSSEEEEEEETTEEEEEEEEEEC---------------CCEEEEEECCGGGTTCC
T ss_pred cCCCCCCCCCCCCccceEEEECCCCCCCceEEEEECCeEEEEEEEecCcccccCccccCCCCceEEEEEEEeCCCCcCCc
Confidence 58999999999999999999999999999999999999999999 6886532 2334568899999999999999874
Q ss_pred C----CCccHHHHHHHHHHHHHhhhc-cCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe
Q 024906 110 G----QGSDHKDFSSMLHKALEGAII-LETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL 184 (260)
Q Consensus 110 g----~~~~~~~l~~~L~~~l~~~i~-le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~ 184 (260)
+ ++.++.+++++++++|+++|+ .+.||++ |+|+++||++|||.++|++||+++||+||||||+++++++++|++
T Consensus 391 ~~~g~~~~Reie~~~li~raL~~vI~~~~~~P~t-I~V~~~VLesDGs~~~AsI~aa~lAL~DAGvPm~~~Vaavs~Gli 469 (549)
T 3gme_A 391 GMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYT-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLV 469 (549)
T ss_dssp CCSSCCCSSHHHHHHHHHHHHTTTCCCTTTCCCE-EEEEEEEEECSSCHHHHHHHHHHHHHHHHTCCCSSCCEEEEEEEE
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhcCccccCCeE-EEEEEEEEECCCCHHHHHHHHHHHHHHhCCCCcccceeEEEEEEE
Confidence 3 677999999999999999999 5788986 999999999999999999999999999999999999999999999
Q ss_pred CC----eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 185 GK----NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLKE 253 (260)
Q Consensus 185 ~~----~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~ 253 (260)
++ .+++||+..|+..++..+.|+ ++. +.++.+++++ .|+.++|.+++++|.+++.+|++.++++|.+
T Consensus 470 ~~g~~~~iL~D~~~~Ed~~~d~d~~Va-~t~-~gitalqmd~ki~G~s~~~l~~~L~~A~~g~~~I~~~m~~al~~ 543 (549)
T 3gme_A 470 KEGDNYVVLSDILGDEDHLGDMDFKVA-GSR-DGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINA 543 (549)
T ss_dssp EETTEEEEEESCCHHHHHHSSEEEEEE-ECS-SCEEEEEEEECCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCceEEEecCChHHHccCCceEEEE-ecC-CCeEEEEEccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 789999999999999999987 444 5588998876 4799999999999999999999999999865
No 24
>3u1k_A Polyribonucleotide nucleotidyltransferase 1, MITO; RNAse PH, KH domain, exoribonuclease; HET: CIT; 2.13A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=326.83 Aligned_cols=217 Identities=24% Similarity=0.220 Sum_probs=196.8
Q ss_pred CCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccc--------cCCCceeEEEEEEEeecCc
Q 024906 34 VDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKA--------MMYSNIGRLNCNVSYTTFA 105 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~--------~~~~~~g~l~v~v~~~p~~ 105 (260)
.++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+|+++...+.+ ...+++|++.++|+|+||+
T Consensus 315 ~~g~R~DGR~~~elRpi~i~~g~l~~a~GSal~~~G~T~Vl~~Vt~~~~~~~~~~d~~~~~l~~~~~g~~~~~y~~~P~s 394 (630)
T 3u1k_A 315 NEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITAINGIKDKNFMLHYEFPPYA 394 (630)
T ss_dssp HHSCCTTSCCTTCCCCEEEEECCSTTSSEEEEEEETTEEEEEEEEEECGGGGSCSSHHHHHHHCCCGGGEEEEEECCGGG
T ss_pred cCCCCCCCCCCccccceEEEECCCCCCCceEEEEECCeEEEEEEEcCCCCchhcccccccccCCCCceEEEEEEEecCCc
Confidence 47899999999999999999999999999999999999999999996543322 1247889999999999999
Q ss_pred ccCCC----CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEE
Q 024906 106 TPVRG----QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSV 181 (260)
Q Consensus 106 ~~~~g----~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~ 181 (260)
+++++ ++.++.+++++++++|+++|+ +.||++ |+|+++||++|||.++|+++|+++||+|+||||+++++++++
T Consensus 395 t~e~~~~g~~~rREi~~~~Li~raLr~vi~-~~~p~t-I~V~~~VLesDGs~~~AsI~aa~lAL~dAGIPl~~~Vaavs~ 472 (630)
T 3u1k_A 395 TNEIGKVTGLNRRELGHGALAEKALYPVIP-RDFPFT-IRVTSEVLESNGSSSMASACGGSLALMDSGVPISSAVAGVAI 472 (630)
T ss_dssp GTCCCCCSSCCHHHHHHHHHHHHHHGGGSC-TTCSSE-EEEEEEEEECSSCHHHHHHHHHHHHHHHTTCCCSSCCEEEEE
T ss_pred ccccccCCCCChHHHHHHHHHHHHHHhhCc-ccCCeE-EEEEEEEEEcCCCHHHHHHHHHHHHHHhCCCCcccceEEEEE
Confidence 98753 577899999999999999998 568975 999999999999999999999999999999999999999999
Q ss_pred EEeC------C-----eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHH
Q 024906 182 SCLG------K-----NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIM 247 (260)
Q Consensus 182 ~~~~------~-----~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i 247 (260)
|+++ + .+++||+..|+..++..+.|+ ++..| |+.++++| +|+.++|.+++++|.+++++|++++
T Consensus 473 gli~~~~~~~g~~~~~~iLlD~~~~Ed~~~d~d~~Va-~t~~g-It~lQ~~~k~~~~s~~~l~~aL~~A~~g~~~I~~~m 550 (630)
T 3u1k_A 473 GLVTKTDPEKGEIEDYRLLTDILGIEDYNGDMDFKIA-GTNKG-ITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIM 550 (630)
T ss_dssp EEEEEECSSSSCEEEEEEEESCCHHHHHTSSEEEEEE-ECSSC-EEEEEEEECSSCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCcccccccCceEEecCCHHHHhhCcceEEEE-ecCCc-eEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997 3 799999999999999999997 56656 99999997 5899999999999999999999999
Q ss_pred HHHHHHH
Q 024906 248 RSCLKEA 254 (260)
Q Consensus 248 ~~~l~~~ 254 (260)
+++|.+.
T Consensus 551 ~~al~~~ 557 (630)
T 3u1k_A 551 NKTISKP 557 (630)
T ss_dssp HHHCSSC
T ss_pred HHHHHHH
Confidence 9999764
No 25
>4aid_A Polyribonucleotide nucleotidyltransferase; transferase-peptide complex; 2.60A {Caulobacter vibrioides} PDB: 4aim_A 4am3_A
Probab=100.00 E-value=2.2e-41 Score=329.39 Aligned_cols=218 Identities=20% Similarity=0.272 Sum_probs=197.6
Q ss_pred CCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEE-Ecccccccc---cCCCceeEEEEEEEeecCcccCC
Q 024906 34 VDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSV-FGPRESKKA---MMYSNIGRLNCNVSYTTFATPVR 109 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V-~gp~~~~~~---~~~~~~g~l~v~v~~~p~~~~~~ 109 (260)
+++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+| .||.+..++ ...+++|++.++|+|+||++.++
T Consensus 327 ~~g~R~DGR~~~elRpI~ie~gvl~~a~GSAl~~~G~TkVl~~Vt~Gp~~~~~~~d~l~~~~~g~~~~~y~~~P~st~er 406 (726)
T 4aid_A 327 DTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKESFLLHYNFPPYSVGET 406 (726)
T ss_dssp SSSBCTTSCBTTCCCCEEEEECSSTTSSEEEEEEETTEEEEEEEEEECGGGSEEEEETTEEEEECEEEEEECCGGGGTCC
T ss_pred cCCCCCCCCCCCCccceEEEECCCCCCCceEEEEeCCeEEEEEEEeCCCCcccccccccCCCceEEEEEEEeCCCccccc
Confidence 68999999999999999999999999999999999999999999 688765432 23468899999999999999875
Q ss_pred C----CCccHHHHHHHHHHHHHhhhc-cCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe
Q 024906 110 G----QGSDHKDFSSMLHKALEGAII-LETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL 184 (260)
Q Consensus 110 g----~~~~~~~l~~~L~~~l~~~i~-le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~ 184 (260)
+ ++.++.+++++++++|+++|+ .+.||++ |+|+++||++|||.++|++||+++||+||||||+++++++++|++
T Consensus 407 ~~~g~~~~Reie~~~li~raL~~vI~~~~~~P~t-I~V~~~VLesDGs~~~AsI~aa~lAL~DAGIPm~~~VaavsvGli 485 (726)
T 4aid_A 407 GRMGSPGRREIGHGKLAWRALRPMLPTKEDFPYT-IRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLI 485 (726)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHGGGSCCTTTCCCE-EEEEEEEEECSSCHHHHHHHHHHHHHHHTTCCCSSCCEEEEEEEE
T ss_pred ccCCCcchhhHHHHHHHHHHHHHhcCccccCCeE-EEEEEEEEEcCCcHHHHHHHHHHHHHHhcCCccccCeeEEEEEEE
Confidence 3 667899999999999999999 6889986 999999999999999999999999999999999999999999999
Q ss_pred CC----eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 185 GK----NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEA 254 (260)
Q Consensus 185 ~~----~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~ 254 (260)
++ .+++||+..|+..++..+.|+ . +.+.|+.++++| +|+.++|.+++++|.++|.+|++.++++|.+.
T Consensus 486 ~~g~~~~iLlD~~~~Ed~~gd~d~~Va-~-t~~gIt~lQ~d~k~~~~s~e~l~~aL~~A~~g~~~I~~~m~~al~~~ 560 (726)
T 4aid_A 486 LEQDGFAVLSDILGDEDHLGDMDFKVA-G-TSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAMDAP 560 (726)
T ss_dssp ECSSCEEEEESCCTTGGGGSSEEEEEE-E-ETTEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred cCCCceEEEecCChhHHhcCCceEEEE-e-cCCceEEEEecCCcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 53 578999999999999888887 3 456699999997 57999999999999999999999999998754
No 26
>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=100.00 E-value=5.5e-41 Score=328.91 Aligned_cols=218 Identities=18% Similarity=0.239 Sum_probs=199.3
Q ss_pred CCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEE-Ecccccccc---cCCCceeEEEEEEEeecCcccCC
Q 024906 34 VDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSV-FGPRESKKA---MMYSNIGRLNCNVSYTTFATPVR 109 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V-~gp~~~~~~---~~~~~~g~l~v~v~~~p~~~~~~ 109 (260)
.++.|+|||.++|+|+|++++|++++++|||+|++|+|+|+|+| .||.+..+. ...+++|++.++|+|+||+++++
T Consensus 352 ~~g~R~DGR~~~elRpI~ie~gvl~~a~GSAl~~~G~TqVL~~Vt~Gp~~~~~~~d~l~~~~~g~~~~~y~f~P~st~e~ 431 (757)
T 1e3p_A 352 AEKKRIDGRGVTDIRTLAAEVEAIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGET 431 (757)
T ss_dssp HTCBCTTSCBTTCCCCEEEEECCSSSSSEEEEEEETTEEEEEEEEEEEGGGSEECCSSSSCCEESEEEEEECCGGGGTCC
T ss_pred cCCCCCCCCCcccccceeEEeCCCCCCCEEEEEEECCcEEEEEEEecCCCccccccccCCCCceEEEEEEEeCCcccccc
Confidence 57899999999999999999999999999999999999999999 588764432 23678999999999999999865
Q ss_pred C----CCccHHHHHHHHHHHHHhhhc-cCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe
Q 024906 110 G----QGSDHKDFSSMLHKALEGAII-LETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL 184 (260)
Q Consensus 110 g----~~~~~~~l~~~L~~~l~~~i~-le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~ 184 (260)
+ ++.++.+++++++++|+++|+ .+.||++ |+|+++||++|||+++|+++|+++||+|+||||++.++++++|++
T Consensus 432 ~~~g~~~~reie~~~li~raL~~vI~~~~~~P~t-I~V~~~VLesDGs~~~Asi~aa~lAL~dAgIP~k~~Vaavs~gli 510 (757)
T 1e3p_A 432 GRVGSPKRREIGHGALAERAIVPVLPTREEFPYA-IRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLKAPVAGIAMGLI 510 (757)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHGGGCCCTTTSCEE-EEEEEEEEECSSCHHHHHHHHHHHHHHHHTCCCSSCCEEEEEEEE
T ss_pred cCCCCCchhHHHHHHHHHHHHHHhccccccCCEE-EEEEEEEEECCCCHHHHHHHHHHHHHHHcCCCcccceEEEEEEEE
Confidence 3 677999999999999999998 7889976 999999999999999999999999999999999999999999999
Q ss_pred ----CC----eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEecC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 185 ----GK----NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGE---WSTPHFNEAMQLCLDASAKLGKIMRSCLKE 253 (260)
Q Consensus 185 ----~~----~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G~---~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~ 253 (260)
++ .+++||+..|+..+++.++|+ . +.++|+.++++|. ++.+.|.+|+++|.+++++|.+.++++|.+
T Consensus 511 ~eg~dg~~~~~iLlDp~~~Ed~~gd~d~~Va-~-t~~~It~lQ~~gk~~gi~~e~l~~aL~~A~~~~~~I~~~m~~al~~ 588 (757)
T 1e3p_A 511 SQEINGETHYVALTDILGAEDAFGDMDFKVA-G-TKEFVTALQLDTKLDGIPASVLAAALKQARDARLHILDVMMEAIDT 588 (757)
T ss_dssp EEESSSCEEEEEEESCCHHHHHHCSEEEEEE-E-CSSSEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ecCCCCccceeEEeCCCHHHHhccCceEEEE-e-cCCeEEEEEEcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44 799999999999999999997 4 4578999999875 699999999999999999999999999976
Q ss_pred H
Q 024906 254 A 254 (260)
Q Consensus 254 ~ 254 (260)
.
T Consensus 589 ~ 589 (757)
T 1e3p_A 589 P 589 (757)
T ss_dssp C
T ss_pred c
Confidence 5
No 27
>3krn_A Protein C14A4.5, confirmed by transcript evidence; RNAse PH domain, homodimer, exosome, cell-death-related DNAS hydrolase; 3.92A {Caenorhabditis elegans}
Probab=100.00 E-value=5.9e-45 Score=312.33 Aligned_cols=207 Identities=23% Similarity=0.315 Sum_probs=167.0
Q ss_pred CCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccCCCCCccHHHHHHHHH
Q 024906 44 FHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVRGQGSDHKDFSSMLH 123 (260)
Q Consensus 44 ~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~~g~~~~~~~l~~~L~ 123 (260)
.+|+|++++++|++++++|||+|++|+|+|+|+|++|.+++++.+.+++++++++ +.|+..+ ++.+ +++++|+
T Consensus 2 ~~e~R~i~ie~g~l~~A~GSa~v~~G~T~Vl~~V~~~~e~~~~~~~~~~~~l~v~--~~p~~G~---~~~~--e~~~li~ 74 (222)
T 3krn_A 2 AGRLREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLDIS--YRANCGD---NKFN--VLNNIIH 74 (222)
T ss_dssp -CCCCCBCCBSCCC----CCCBCCBTTCEEECCCCSSCC-------------CCC--SSCCCC-----CCS--SCTTHHH
T ss_pred CCcccceEEEECCCCCCCeEEEEEECCcEEEEEEECCCCCcccccCCceEEEEEE--EcCCCCC---CCHH--HHHHHHH
Confidence 5799999999999999999999999999999999999987766677888887654 5576422 2223 8999999
Q ss_pred HHHHhhhccCCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEeCCChhhhhcCCee
Q 024906 124 KALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGS 203 (260)
Q Consensus 124 ~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~DPt~~Ee~~~~~~ 203 (260)
+.|+++|+++.||++.|+|+++||++||++++|++||+++||+++||||+++++++++|++++.+++|||..|++.+++.
T Consensus 75 r~l~~~i~~~~~p~~~I~I~~~VL~~DG~~~~aai~aa~~AL~dagiP~~~~v~avsvg~~~g~~llDpt~~Ee~~~~~~ 154 (222)
T 3krn_A 75 STLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNGMPFETVFCGVLIVRVKDELIIDPTAKQEAASTGR 154 (222)
T ss_dssp HC--CCSCC-----CCCCCCCEEEECCSCHHHHHHHGGGTTTTTTTCCTTSCCCCCCCEECSSSEESSCCTTTTTSCC-C
T ss_pred HHHHHhccHHhCCCcEEEEEEEEEECCCChHHHHHHHHHHHHHHCCCCccCcEEEEEEEEECCEEEeCCCHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEE---cCCCCcEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024906 204 LMIAC---MPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASD 257 (260)
Q Consensus 204 ~~va~---~~~~~~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~ 257 (260)
++|++ +++.++|+++++.|.++.+++.+++++|.++++++.++++++++++.++
T Consensus 155 l~va~~~~~~~~~~i~~vq~~g~~~~~~l~~~l~~a~~~~~~i~~~~~~~l~~~~~~ 211 (222)
T 3krn_A 155 VLFSVCKGSDGHPEVCAMDAIGHWDFIQLEAAWSLAQPSASAIFDFYKTVMKRKLSV 211 (222)
T ss_dssp CCCEECCCSSSSCCEEEECCBSSCTTHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEccCCCCCCEEEEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99997 5567999999999999999999999999999999999999999988765
No 28
>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=100.00 E-value=8.6e-41 Score=326.45 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=190.5
Q ss_pred CCCCCCCCCCCCCCcceEEEeCCCCCCCeeEEEEeCCeEEEEEE-Eccccccc---ccCCCceeEEEEEEEeecCcccCC
Q 024906 34 VDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSV-FGPRESKK---AMMYSNIGRLNCNVSYTTFATPVR 109 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~Vi~~V-~gp~~~~~---~~~~~~~g~l~v~v~~~p~~~~~~ 109 (260)
.++.|+|||.++|+|++++++|++++++|||+|++|+|+|+|+| .||.+..+ +...+++|++.++|+|+||+++++
T Consensus 317 ~~g~R~DGR~~~elRpI~ie~gvl~~a~GSAl~~~G~TqVL~~Vt~gp~e~~~~~d~l~~~~~g~~~~~y~~~P~st~e~ 396 (723)
T 3cdi_A 317 AGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGET 396 (723)
T ss_dssp TTCCCTTSCCTTCCCCEEEEESCSTTSSEEEEEEETTEEEEEEEEECC-------------CTTSEEEEEECCGGGGTCC
T ss_pred ccCcCCCCCCccccccceEEeCCCCCCCeEEEEEECCcEEEEEEEecCcccccCCcccCCCCceEEEEEEecCCCCcccc
Confidence 58999999999999999999999999999999999999999999 58865332 223568899999999999999876
Q ss_pred C----CCccHHHHHHHHHHHHHhhhcc-CCCCCcEEEEEEEEEcCCCccHhHHHHHHHHHHHHcCCcccCeEEEEEEEEe
Q 024906 110 G----QGSDHKDFSSMLHKALEGAIIL-ETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCL 184 (260)
Q Consensus 110 g----~~~~~~~l~~~L~~~l~~~i~l-e~~pk~~i~I~v~VL~~dG~l~~a~i~Aa~~AL~~agip~~~~~~avt~~~~ 184 (260)
| ++.++..++++++++|+++|++ +.||++ |+|+++||++|||+++|+++|+++||+|+||||+++++++++|++
T Consensus 397 ~r~g~p~~REi~~~~li~raL~~vI~~~~~~p~t-I~Vd~~VLesdGs~~~Asi~aa~lAL~dAgVPl~~~vaavs~gli 475 (723)
T 3cdi_A 397 GMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYT-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLV 475 (723)
T ss_dssp CCC-----CTTHHHHHHHHHHHTTSCCSSSSCSC-EEEEEEEEECSSCHHHHHHHHHHHHHHHTTCCCSSCCEEEEEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhcCcccCCCEE-EEEEEEEEeCCCCHHHHHHHHHHHHHhcCCCCcccceeeEEEEEE
Confidence 4 4668889999999999999996 778876 999999999999999999999999999999999999999999999
Q ss_pred C-C---eEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024906 185 G-K---NLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG---EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAA 255 (260)
Q Consensus 185 ~-~---~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G---~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~ 255 (260)
+ + .+++||+..|+..+++.++|+ ++..| |+.++++| +|+.++|.+++++|.+++++|.+.++++|.+..
T Consensus 476 ~~g~~~~iL~Dp~~~Ed~~~d~d~~Va-~t~~g-I~~lq~~gk~~~is~e~l~~~l~~A~~~~~~I~~~m~~al~~~~ 551 (723)
T 3cdi_A 476 KEGDNYVVLSDILGDEDHLGDMDFKVA-GSRDG-ISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPR 551 (723)
T ss_dssp EETTEEEEESSCCGGGGGGCSEEEEEE-ECSSC-EEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred cCCCceEEEECCChHHhhhccceeeec-ccCCc-eEEEEeCCccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 5 3 499999999999999999998 56656 99999985 689999999999999999999999999997653
No 29
>3u1k_A Polyribonucleotide nucleotidyltransferase 1, MITO; RNAse PH, KH domain, exoribonuclease; HET: CIT; 2.13A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=270.91 Aligned_cols=206 Identities=19% Similarity=0.233 Sum_probs=185.5
Q ss_pred cceEEEeCCCCC-CCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccC-------C-C-CCccHHH
Q 024906 48 RPAFFRTGAVNS-ASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPV-------R-G-QGSDHKD 117 (260)
Q Consensus 48 R~i~i~~g~l~~-a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~-------~-g-~~~~~~~ 117 (260)
|++++++|.+.+ |+|||++++|+|+|+|+|++|.++++. +...|+|+|+..+|+.+. | | +++++.+
T Consensus 15 R~i~ietG~~a~qA~GSa~v~~G~T~VL~tv~~~~~~~~~----df~pL~v~y~~~~~a~g~iPg~f~kRegrps~~e~l 90 (630)
T 3u1k_A 15 RKLEISSGKLARFADGSAVVQSGDTAVMVTAVSKTKPSPS----QFMPLVVDYRQKAAAAGRIPTNYLRREVGTSDKEIL 90 (630)
T ss_dssp SEEEEEESSSCTTSSEEEEEEETTEEEEEEEEECSSCCSS----SSCCEEEEEECSEETTTTEECTTC-----CCHHHHH
T ss_pred EEEEEEeCCccccCCeeEEEEECCeEEEEEEEecCCCCCC----CeeEEEEEEEecccccCCCCccccccCCCCCHHHHH
Confidence 789999998874 999999999999999999999875532 456699999998888741 1 3 6778999
Q ss_pred HHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCcc--HhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEeCCChh
Q 024906 118 FSSMLHKALEGAIILETFPKTTVDVFALVLESGGSD--LPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLE 195 (260)
Q Consensus 118 l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l--~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~DPt~~ 195 (260)
++++|++.|+++++++.+|+.+ |+++||++||+. ..+++||+++||.++||||++.+++|++|++++.+|+|||.+
T Consensus 91 isRlIdR~lRp~~~~~~~~~~q--I~~~VLs~Dg~~~~~~aai~aAs~AL~~s~iP~~~~vaav~vg~i~g~~vldPt~~ 168 (630)
T 3u1k_A 91 TSRIIDRSIRPLFPAGYFYDTQ--VLCNLLAVDGVNEPDVLAINGASVALSLSDIPWNGPVGAVRIGIIDGEYVVNPTRK 168 (630)
T ss_dssp HHHHHHHHHGGGSCTTCCCCEE--EEEEEEECCSSSCHHHHHHHHHHHHHHHSSSCCCCCCEEEEEEEETTEEEESCCHH
T ss_pred HHHHHhHHhhhcccccCCCceE--EEEEEEECCCCCCHHHHHHHHHHHHHhccCCCcCCCeEEEEEEEECCEEEECCCHH
Confidence 9999999999999999888765 699999999998 889999999999999999999999999999999999999999
Q ss_pred hhhcCCeeEEEEEcCCCCcEEEEEEecC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 024906 196 EESYQDGSLMIACMPSRYEVTQLTVTGE-WSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260 (260)
Q Consensus 196 Ee~~~~~~~~va~~~~~~~i~~i~~~G~-~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~~ 260 (260)
|++.++..++|+. +..++|++++..|. ++.+++.+++++|.++++++++++++++++..+.|++
T Consensus 169 E~~~s~~dl~Va~-t~~~~i~mve~~~~~~se~~~~~al~~a~~~~~~l~~~~~~~~~~~~~~~~~ 233 (630)
T 3u1k_A 169 EMSSSTLNLVVAG-APKSQIVMLEASAENILQQDFCHAIKVGVKYTQQIIQGIQQLVKETGVTKRT 233 (630)
T ss_dssp HHHTEEEEEEEEE-ETTTEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHhhCCceEEEEE-ccCCcEEEEECCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcc
Confidence 9999999999985 45688999999885 9999999999999999999999999999999887754
No 30
>3gme_A Polyribonucleotide nucleotidyltransferase; protein-RNA complex, cytoplasm, nucleotidyltransferase, RNA- binding, transferase, hydrolase; 2.40A {Escherichia coli E24377A} PDB: 3gll_A 3gcm_A 3h1c_A 3cdj_A
Probab=99.97 E-value=2.2e-28 Score=231.86 Aligned_cols=204 Identities=18% Similarity=0.214 Sum_probs=174.7
Q ss_pred cceEEEeCCCC-CCCeeEEEEeCCeEEEEEEEcccccccccCCCceeE--EEEEEEeecCccc-------CC-C-CCccH
Q 024906 48 RPAFFRTGAVN-SASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGR--LNCNVSYTTFATP-------VR-G-QGSDH 115 (260)
Q Consensus 48 R~i~i~~g~l~-~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~--l~v~v~~~p~~~~-------~~-g-~~~~~ 115 (260)
|++++++|.+. +|+||+++++|+|+|+|+|+++.+++ +..++ ++|+|+...++.+ .| | +++++
T Consensus 14 R~i~ietg~~ak~A~GSvlv~~GdT~Vl~tv~~~~~~~-----~g~df~Pltv~Y~e~~~a~G~iPg~~~~REGrps~~~ 88 (549)
T 3gme_A 14 HTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAK-----PGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGE 88 (549)
T ss_dssp EEEEEEESSSCTTSSEEEEEEETTEEEEEEEEECSSCC-----TTCCSCCEEEEEEECGGGTTCCCSCC-----CCCHHH
T ss_pred EEEEEEECCccCCCCeEEEEEECCEEEEEEEEecCCCC-----CCCCCccceeeeeeehhhcccCCCcCcCcCCCCChhh
Confidence 78999999775 79999999999999999999987643 23344 8888864333332 11 4 77899
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCccH--hHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEeCCC
Q 024906 116 KDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDL--PVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPV 193 (260)
Q Consensus 116 ~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l~--~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~DPt 193 (260)
.+++++|++.|+++++...+.. ++|+++||+.||+.. .+++||+++||..++||+++.+.+|++|+++|.+++|||
T Consensus 89 ~l~~RlIdR~lRplfp~~~~~e--vqI~~~Vls~D~~~~pd~~ai~gAs~AL~~s~iP~~gpvaaV~Vg~i~g~~vlnPt 166 (549)
T 3gme_A 89 TLIARLIDRPIRPLFPEGFVNE--VQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPT 166 (549)
T ss_dssp HHHHHHHHHHHGGGSCTTCCSC--EEEEEEEEECCSSSCHHHHHHHHHHHHHHHHCSCCCCCCEEEEEEEETTEEEESCC
T ss_pred hHHHHHhCCccccccccCCccc--EEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCCcCCCeeEEEEEEECCEEEECCC
Confidence 9999999999999998887654 777899999998553 688999999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEEEEcCCCCcEEEEEEec-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 024906 194 LEEESYQDGSLMIACMPSRYEVTQLTVTG-EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260 (260)
Q Consensus 194 ~~Ee~~~~~~~~va~~~~~~~i~~i~~~G-~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~~ 260 (260)
.+|++.++..++|+ .+. +.|++++..| .|+.+++.+++++|.+.++++++++++++++..+.|++
T Consensus 167 ~~e~~~s~~dl~va-~t~-~~i~mve~e~~~~se~~~~~al~~a~~~i~~l~~~q~~~~~~~~~~~~~ 232 (549)
T 3gme_A 167 QDELKESKLDLVVA-GTE-AAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWD 232 (549)
T ss_dssp TTTTTTCSBCEEEE-ECS-SCEEEEEEEEEEECHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCCCCC
T ss_pred HHHHhhCceEEEEE-ecC-CeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999998 444 4599999887 79999999999999999999999999999999887654
No 31
>4aid_A Polyribonucleotide nucleotidyltransferase; transferase-peptide complex; 2.60A {Caulobacter vibrioides} PDB: 4aim_A 4am3_A
Probab=99.96 E-value=7.1e-28 Score=234.60 Aligned_cols=206 Identities=18% Similarity=0.203 Sum_probs=176.6
Q ss_pred cceEEEeCCCC-CCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCccc-------CC-C-CCccHHH
Q 024906 48 RPAFFRTGAVN-SASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATP-------VR-G-QGSDHKD 117 (260)
Q Consensus 48 R~i~i~~g~l~-~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~-------~~-g-~~~~~~~ 117 (260)
|++++++|.+. +|+||+++++|+|+|+|+|+++.++++. .+..+++++|+...++.+ .| | +++++.+
T Consensus 28 R~i~ietg~~ak~A~GSvlv~~GdT~VL~tv~~~~~~~~g---~df~pltveY~ek~~a~G~iPg~~~~REGrps~~~~l 104 (726)
T 4aid_A 28 KTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPG---QDFFPLTVNYQEKTFAAGKIPGGFFKREGRPSEKETL 104 (726)
T ss_dssp EEEEEEESSSCTTSSEEEEEEETTEEEEEEEEECSSCCTT---CCSCCEEEEEEECGGGGTCCCCSTTCSCCSCCHHHHH
T ss_pred eeEEEEECCccCCCCeeEEEEECCeEEEEEEEecCCCCCC---CCCcCceeeeeeehhhcccCCCcccCCCCCCCchhhh
Confidence 68999999775 7999999999999999999998764421 233458888874333322 22 4 7789999
Q ss_pred HHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCcc--HhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEeCCChh
Q 024906 118 FSSMLHKALEGAIILETFPKTTVDVFALVLESGGSD--LPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLE 195 (260)
Q Consensus 118 l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l--~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~DPt~~ 195 (260)
++++|+|.|+++++...+. .++|+++||+.||+. ..+++||+++||.++++|+++.+.+|++|+++|.+++|||.+
T Consensus 105 i~RlIdR~lRplf~~~~~~--evqI~~~Vls~Dg~~~~d~~ai~gAs~AL~~s~iP~~~~vaaV~Vg~i~g~~vldPt~~ 182 (726)
T 4aid_A 105 VSRLIDRPIRPLFVKGFKN--EVQVVVTVLQHDLENDPDILGMVAASAALCLSGAPFMGPIGAARVGWVDGAYVLNPTLD 182 (726)
T ss_dssp HHHHHHHHHGGGBCTTCCS--CEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHTCSBCCCCEEEEEEEETTEEEESCCHH
T ss_pred HHHHhCCccccccccCCcc--ceEEEEEEEecCCCCChhHHHHHHHHHHHHhcCCCcCCCeEEEEEEEECCEEEECCCHH
Confidence 9999999999999987764 478889999999864 367999999999999999999999999999999999999999
Q ss_pred hhhcCCeeEEEEEcCCCCcEEEEEEec-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 024906 196 EESYQDGSLMIACMPSRYEVTQLTVTG-EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260 (260)
Q Consensus 196 Ee~~~~~~~~va~~~~~~~i~~i~~~G-~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~~ 260 (260)
|++.++..++|+ ++..+ |++++..| .|+.+++.+++++|.+.++++++++++++++..+.+++
T Consensus 183 E~~~s~~dl~va-~t~~~-i~mve~~~~~~se~~~~~al~~a~~~i~~l~~~q~~~~~~~g~~k~~ 246 (726)
T 4aid_A 183 EMKESKMDLVVA-GTADA-VMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHAAKEPFA 246 (726)
T ss_dssp HHHTCSEEEEEE-ECSSC-EEEEEEEESSBCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCCCCC
T ss_pred HHhhCceeEEEE-EeCCe-EEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 999999999998 45444 99999887 69999999999999999999999999999999887654
No 32
>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=99.96 E-value=1.9e-27 Score=232.37 Aligned_cols=211 Identities=17% Similarity=0.204 Sum_probs=176.7
Q ss_pred CCCCCCCCCCCcceEEEeCCC-CCCCeeEEEEeCCeEEEEEEEcccccccccCCCceeEEEEEEEeecCcccC-------
Q 024906 37 LRPDSRGFHQCRPAFFRTGAV-NSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPV------- 108 (260)
Q Consensus 37 ~R~DGR~~~e~R~i~i~~g~l-~~a~GSa~v~~G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~~------- 108 (260)
++.+| |++.+++|.+ .+|+||+++++|+|.|+|+|+++.++++. .+.-.++|+|.-.-++.+.
T Consensus 15 ~~~~~------r~i~ietg~ia~qA~GSv~v~~G~T~Vl~tv~~~~~~~~~---~~f~pltv~y~ek~~a~g~ipg~f~k 85 (723)
T 3cdi_A 15 FQYGQ------HTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPG---QDFFPLTVNYQERTYAAGRIPGSFFR 85 (723)
T ss_dssp EEETT------EEEEEEESSSCTTSSEEEEEEETTEEEEEEEEECSSCCSS---CCSCCEEEEEEECGGGGTCCCC----
T ss_pred EEECC------EEEEEEeCccccCCCeeEEEEECCEEEEEEEEecCCCCCC---CCeeeEEEEEeEeccccccCCCcccc
Confidence 45566 4899999987 58999999999999999999998654321 1223467777633333332
Q ss_pred -CC-CCccHHHHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCcc-H-hHHHHHHHHHHHHcCCcccCeEEEEEEEEe
Q 024906 109 -RG-QGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSD-L-PVVISCASVALADAGIMMYDLVASVSVSCL 184 (260)
Q Consensus 109 -~g-~~~~~~~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l-~-~a~i~Aa~~AL~~agip~~~~~~avt~~~~ 184 (260)
.| +++++..++++|+|.|+++++... ++.++|+++||+.||+. . .+++||+++||..++||+.+.+++|++|++
T Consensus 86 ReGrpse~e~l~sRlIdR~lRplfp~~~--~~~vqv~~~vls~Dg~~~~d~~ai~aAsaAL~~s~iP~~~pv~av~vg~i 163 (723)
T 3cdi_A 86 REGRPSEGETLIARLIDRPIRPLFPEGF--VNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYI 163 (723)
T ss_dssp ---CCCHHHHHHHHHHHHHHGGGSCTTC--CSCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTSSCCCCCCCEEEEEE
T ss_pred CCCCCChHHhHHHHHhCccchhcccccC--cceEEEEEEEEEcCCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEE
Confidence 24 778999999999999999887665 35689999999999986 4 599999999999999999999999999999
Q ss_pred CCeEEeCCChhhhhcCCeeEEEEEcCCCCcEEEEEEec-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 024906 185 GKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTG-EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260 (260)
Q Consensus 185 ~~~iv~DPt~~Ee~~~~~~~~va~~~~~~~i~~i~~~G-~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~~~ 260 (260)
+|.+++|||.+|++.++..++|+ .+ ...+++++..| .|+.+++.+++++|.+.++++.+++++++++..+.+++
T Consensus 164 ~g~~v~nPt~~e~~~s~~~lvva-gt-~~~i~mve~~~~~~se~~~~~al~~a~~~~~~l~~~~~~~~~~~~~~~~~ 238 (723)
T 3cdi_A 164 NDQYVLNPTQDELKESKLDLVVA-GT-EAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWD 238 (723)
T ss_dssp TTEEEESCCTTGGGGCSEEEEEE-EC-SSCEEEEEEEEEEECHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCCCCCC
T ss_pred CCEEEECcCHHHHHhCCceEEEE-cc-CCEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999987 33 45589999877 59999999999999999999999999999998877653
No 33
>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=99.96 E-value=2.9e-27 Score=231.91 Aligned_cols=207 Identities=18% Similarity=0.158 Sum_probs=177.6
Q ss_pred cceEEEeCCC-CCCCeeEEEEe-CCeEEEEEEEcccccccccCCCceeEEEEEEEeecCccc-------CC-C-CCccHH
Q 024906 48 RPAFFRTGAV-NSASGSAYAEF-GNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATP-------VR-G-QGSDHK 116 (260)
Q Consensus 48 R~i~i~~g~l-~~a~GSa~v~~-G~T~Vi~~V~gp~~~~~~~~~~~~g~l~v~v~~~p~~~~-------~~-g-~~~~~~ 116 (260)
|++++++|.+ .+|+||+++++ |+|+|+|+|+++.++++. .+...|+|+|+...++.. .| | ++++++
T Consensus 37 r~i~~etg~la~qA~GSv~v~~~G~T~Vl~tv~~~~~~~~~---~df~pLtv~y~ek~~a~g~iPg~f~~REGrps~~e~ 113 (757)
T 1e3p_A 37 RTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKDQ---LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAI 113 (757)
T ss_dssp EEEEEEESSSCTTSSEEEEEEETTTEEEEEEEEEEEEECTT---CSSCCEEEEEEECGGGGTCCCCSTTSSCCSCCHHHH
T ss_pred EeEEEEECccccCCCeEEEEEECCCeEEEEEEEecCCCCCC---CCCccEEEEEEecccccccCCCcccccCcCCChHHH
Confidence 6899999987 68999999999 999999999998765332 133448999975544432 22 4 778999
Q ss_pred HHHHHHHHHHHhhhccCCCCCcEEEEEEEEEcCCCcc--HhHHHHHHHHHHHHcCCcccCeEEEEEEEEeCCeEEeCCCh
Q 024906 117 DFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSD--LPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVL 194 (260)
Q Consensus 117 ~l~~~L~~~l~~~i~le~~pk~~i~I~v~VL~~dG~l--~~a~i~Aa~~AL~~agip~~~~~~avt~~~~~~~iv~DPt~ 194 (260)
.++++|+|.|+++++...+ ..++|+++||+.||+. ..+++||+++||.+++||+.+.+.+|++|+++|.+++|||.
T Consensus 114 l~~RlIdR~LRplfp~~~~--~evqv~~~Vls~D~~~~~~~~ai~gAs~AL~~s~iP~~~~vaav~vg~~~g~~vlnPt~ 191 (757)
T 1e3p_A 114 LTCRLIDRPLRPSFKKGLR--NEIQVVATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTH 191 (757)
T ss_dssp HHHHHHHHHHGGGBCTTBC--EEEEEEEEEEECCTTSCCHHHHHHHHHHHHHHTTSSBCCCCEEEEEEEETTEEEESCCH
T ss_pred HHHHHHCCcchhccccCCC--CceEEEEEEEEECCCCCHHHHHHHHHHHHHhccCCCCCCceEEEEEEEECCEEEECCCH
Confidence 9999999999998877654 3599999999999865 99999999999999999999999999999999999999999
Q ss_pred hhhhcCCeeEEEEEcCC----CCcEEEEEE-------------ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024906 195 EEESYQDGSLMIACMPS----RYEVTQLTV-------------TGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASD 257 (260)
Q Consensus 195 ~Ee~~~~~~~~va~~~~----~~~i~~i~~-------------~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~ 257 (260)
.|++.++..++|+ ++. .+.|++++. .+.|+.+++.+++++|.+.++++++++++++++..+.
T Consensus 192 ~e~~~s~~dl~va-~t~~~~~~~~i~mvE~q~t~~~~~~~~~~~~~~se~~l~~al~~a~~~i~~l~~~q~~~~~~~~~~ 270 (757)
T 1e3p_A 192 TELEDAVFDMVVA-GRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLDAAKPFIKVLCKAQADLAAKAAKP 270 (757)
T ss_dssp HHHTTEEEEEEEE-EEECTTSCEEEEEEEEEECSSHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHhcCceeEEEE-eccccCCCCcEEEEEEecccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999899988 442 567899988 2479999999999999999999999999999988876
Q ss_pred hcC
Q 024906 258 EQE 260 (260)
Q Consensus 258 ~~~ 260 (260)
+++
T Consensus 271 ~~~ 273 (757)
T 1e3p_A 271 TGE 273 (757)
T ss_dssp CCC
T ss_pred Ccc
Confidence 653
No 34
>1whu_A Polynucleotide phosphorylase; 3'-5' RNA exonuclease; pnpase, alpha-helical domain, structural genomics; NMR {Mus musculus} SCOP: a.4.9.1
Probab=87.97 E-value=0.22 Score=36.44 Aligned_cols=15 Identities=20% Similarity=0.213 Sum_probs=13.9
Q ss_pred CCCCCCCCCCCCCCc
Q 024906 34 VDWLRPDSRGFHQCR 48 (260)
Q Consensus 34 ~~~~R~DGR~~~e~R 48 (260)
..+.|+|||.+++.|
T Consensus 89 ~e~~RiDGR~~deIr 103 (104)
T 1whu_A 89 NEYKRCDGRDSGPSS 103 (104)
T ss_dssp TSSCSCCCCCSSCSC
T ss_pred CCCcCCCCCCccccc
Confidence 688999999999988
No 35
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=48.99 E-value=16 Score=22.44 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 024906 223 EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDE 258 (260)
Q Consensus 223 ~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~ 258 (260)
.++.+.+..+-.+|........++|++++.++..+.
T Consensus 15 rl~~el~~~l~~~a~~~g~s~s~~ir~ai~~~l~~~ 50 (55)
T 2k9i_A 15 YIPQEWHDRLMEIAKEKNLTLSDVCRLAIKEYLDNH 50 (55)
T ss_dssp EECHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 467888999999998888888888888887776543
No 36
>1xpp_A TA1416, DNA-directed RNA polymerase subunit L; structural genomics, protein structure initiative, MCSG; 1.60A {Thermoplasma acidophilum} SCOP: d.74.3.2
Probab=38.48 E-value=84 Score=23.05 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=35.8
Q ss_pred cEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024906 214 EVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASD 257 (260)
Q Consensus 214 ~i~~i~~~G~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~ 257 (260)
-.+.++..|..+.+.|.++++-....|..+.+.++.++++....
T Consensus 63 ~~lrIqT~~~~p~eaL~~al~~L~~~~~~l~~~f~~a~~~~~~~ 106 (115)
T 1xpp_A 63 PQIYVRVKSGKPQSAIKRAVRKLSKLYEDLGTQFQKEFQRYESD 106 (115)
T ss_dssp CEEEEEESSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh
Confidence 35678888755778899999999999999999999988876443
No 37
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=36.41 E-value=15 Score=23.39 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 024906 223 EWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDE 258 (260)
Q Consensus 223 ~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~~~~~~~ 258 (260)
.++++....+-..|....+.+.++|+++|.++..++
T Consensus 19 rId~eLH~rlk~~Aa~~g~Sln~~i~eAL~~yl~~~ 54 (56)
T 2kel_A 19 YMDKDLKTRLKVYCAKNNLQLTQAIEEAIKEYLQKR 54 (56)
T ss_dssp EEEHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 367888999999999999999999999999987654
No 38
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=26.66 E-value=1.9e+02 Score=22.03 Aligned_cols=45 Identities=7% Similarity=0.211 Sum_probs=32.6
Q ss_pred cCCeeEEEEEcCCCCcEEEEEEec----CCCHHHHHHHHHHHHHHHHHHH
Q 024906 199 YQDGSLMIACMPSRYEVTQLTVTG----EWSTPHFNEAMQLCLDASAKLG 244 (260)
Q Consensus 199 ~~~~~~~va~~~~~~~i~~i~~~G----~~~~~~l~~~l~~A~~~~~~i~ 244 (260)
...|.++|. ++..++|..++-+= +-+.+.|++++-.|...|.+-.
T Consensus 73 sGgGlVkVt-vnG~~ev~~I~Idp~lldpeD~E~LeDLI~aAvNdA~~ka 121 (143)
T 1ybx_A 73 AGGGAVTVV-ATGRKDIKEITIKPEVVDPDDVEMLQDLILAAVNEALRKA 121 (143)
T ss_dssp ETTTTEEEE-EETTCCEEEEEECGGGCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCEEEEE-EecCceEEEEEECHHHcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 456678876 57789999999874 2456788888887777666543
No 39
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=20.09 E-value=66 Score=19.40 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024906 223 EWSTPHFNEAMQLCLDASAKLGKIMRSCLK 252 (260)
Q Consensus 223 ~~~~~~l~~~l~~A~~~~~~i~~~i~~~l~ 252 (260)
.+++++...+-+.|......+.++|++++-
T Consensus 21 Rlt~eE~~~l~~~A~~~g~s~SeyiR~~~l 50 (51)
T 2ba3_A 21 RFSPVEDETIRKKAEDSGLTVSAYIRNAAL 50 (51)
T ss_dssp EECHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 478999999999999998889999998763
Done!