Query 024907
Match_columns 260
No_of_seqs 209 out of 1130
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 16:31:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024907hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2uyo_A Hypothetical protein ML 100.0 4.3E-41 1.5E-45 307.9 19.8 215 2-219 28-292 (310)
2 3iei_A Leucine carboxyl methyl 100.0 4.6E-38 1.6E-42 290.5 19.3 205 5-209 41-285 (334)
3 1rjd_A PPM1P, carboxy methyl t 100.0 4.9E-36 1.7E-40 277.0 10.0 204 3-209 18-290 (334)
4 2zwa_A Leucine carboxyl methyl 100.0 3.7E-30 1.3E-34 257.0 18.9 196 13-210 65-314 (695)
5 3giw_A Protein of unknown func 98.9 1.3E-08 4.4E-13 91.4 12.1 127 39-170 64-200 (277)
6 2qe6_A Uncharacterized protein 98.6 3.8E-07 1.3E-11 80.9 13.1 129 35-170 59-196 (274)
7 3jwh_A HEN1; methyltransferase 96.7 0.026 8.8E-07 46.8 12.6 165 36-214 16-200 (217)
8 3jwg_A HEN1, methyltransferase 96.6 0.031 1.1E-06 46.3 12.5 165 36-214 16-200 (219)
9 3gwz_A MMCR; methyltransferase 96.0 0.064 2.2E-06 48.8 12.1 136 54-203 202-354 (369)
10 4gek_A TRNA (CMO5U34)-methyltr 96.0 0.073 2.5E-06 46.3 11.7 116 39-170 58-179 (261)
11 3mgg_A Methyltransferase; NYSG 95.8 0.21 7.1E-06 42.7 13.5 100 55-169 38-141 (276)
12 4a6d_A Hydroxyindole O-methylt 95.7 0.079 2.7E-06 48.0 11.0 135 54-203 179-332 (353)
13 3dp7_A SAM-dependent methyltra 95.7 0.073 2.5E-06 48.2 10.8 105 54-170 179-288 (363)
14 3i53_A O-methyltransferase; CO 95.5 0.038 1.3E-06 49.2 7.9 134 55-203 170-319 (332)
15 3ocj_A Putative exported prote 95.2 0.38 1.3E-05 42.0 13.5 121 35-170 100-227 (305)
16 3lcc_A Putative methyl chlorid 95.2 0.055 1.9E-06 45.3 7.6 131 56-200 68-201 (235)
17 3g2m_A PCZA361.24; SAM-depende 95.2 0.074 2.5E-06 46.4 8.7 104 56-170 84-190 (299)
18 3lst_A CALO1 methyltransferase 94.0 0.12 4E-06 46.4 7.2 100 54-170 184-287 (348)
19 1ri5_A MRNA capping enzyme; me 94.0 1.7 5.7E-05 37.0 14.4 106 55-171 65-175 (298)
20 1wzn_A SAM-dependent methyltra 93.8 0.12 4.2E-06 43.4 6.7 117 39-172 28-147 (252)
21 3dlc_A Putative S-adenosyl-L-m 93.8 0.25 8.6E-06 40.0 8.4 101 56-169 45-147 (219)
22 3gu3_A Methyltransferase; alph 93.8 2.9 9.9E-05 35.9 16.1 100 54-169 22-125 (284)
23 3e23_A Uncharacterized protein 93.7 0.12 4E-06 42.4 6.2 126 55-200 44-176 (211)
24 3mcz_A O-methyltransferase; ad 93.6 0.52 1.8E-05 41.9 10.8 136 55-201 180-334 (352)
25 2p8j_A S-adenosylmethionine-de 93.5 0.6 2.1E-05 37.7 10.2 102 55-170 24-128 (209)
26 2r3s_A Uncharacterized protein 93.3 0.76 2.6E-05 40.3 11.2 104 54-170 165-272 (335)
27 3bgv_A MRNA CAP guanine-N7 met 92.9 0.27 9.2E-06 43.1 7.6 134 35-171 15-156 (313)
28 1x19_A CRTF-related protein; m 92.7 1.2 4.2E-05 39.7 11.8 103 54-170 190-296 (359)
29 2vdw_A Vaccinia virus capping 92.6 0.46 1.6E-05 42.1 8.7 134 35-171 29-170 (302)
30 1kpg_A CFA synthase;, cyclopro 92.4 0.41 1.4E-05 41.1 8.0 117 38-169 50-167 (287)
31 3ou2_A SAM-dependent methyltra 92.1 0.54 1.9E-05 38.1 8.1 97 55-169 47-145 (218)
32 3hem_A Cyclopropane-fatty-acyl 91.8 0.69 2.4E-05 40.1 8.8 118 37-169 57-182 (302)
33 3dli_A Methyltransferase; PSI- 91.8 0.34 1.2E-05 40.5 6.5 127 55-200 42-178 (240)
34 3dtn_A Putative methyltransfer 91.8 0.39 1.3E-05 39.7 6.9 98 55-168 45-146 (234)
35 3ggd_A SAM-dependent methyltra 91.7 1.3 4.4E-05 36.9 10.2 104 55-170 57-164 (245)
36 4htf_A S-adenosylmethionine-de 91.5 2 6.8E-05 36.7 11.4 115 41-171 58-174 (285)
37 3pfg_A N-methyltransferase; N, 91.4 0.68 2.3E-05 39.1 8.1 108 40-169 39-150 (263)
38 2fk8_A Methoxy mycolic acid sy 91.3 0.63 2.1E-05 40.7 8.1 116 39-169 77-193 (318)
39 2fyt_A Protein arginine N-meth 91.2 1 3.6E-05 40.3 9.6 123 35-169 46-170 (340)
40 3f4k_A Putative methyltransfer 90.8 1.4 4.7E-05 36.8 9.4 130 55-200 47-190 (257)
41 3lcv_B Sisomicin-gentamicin re 90.6 2 6.9E-05 38.1 10.5 154 33-202 111-268 (281)
42 1xtp_A LMAJ004091AAA; SGPP, st 90.5 0.82 2.8E-05 38.1 7.7 148 37-200 78-232 (254)
43 3p9c_A Caffeic acid O-methyltr 90.3 3.9 0.00013 36.8 12.6 95 54-170 201-299 (364)
44 2ip2_A Probable phenazine-spec 90.1 0.44 1.5E-05 42.0 6.0 101 56-170 169-273 (334)
45 3ofk_A Nodulation protein S; N 90.0 1.2 4.1E-05 36.2 8.2 112 42-170 40-154 (216)
46 3h2b_A SAM-dependent methyltra 89.9 0.65 2.2E-05 37.5 6.4 127 56-200 43-176 (203)
47 3hnr_A Probable methyltransfer 89.8 1.8 6.3E-05 35.1 9.2 97 55-169 46-144 (220)
48 1qzz_A RDMB, aclacinomycin-10- 89.8 1.4 4.8E-05 39.3 9.1 102 55-170 183-288 (374)
49 3cgg_A SAM-dependent methyltra 89.8 2.6 8.9E-05 33.0 9.8 121 55-201 47-170 (195)
50 3vc1_A Geranyl diphosphate 2-C 89.7 2.1 7.1E-05 37.3 9.9 100 55-168 118-219 (312)
51 1tw3_A COMT, carminomycin 4-O- 89.6 1 3.6E-05 40.0 8.1 103 55-171 184-290 (360)
52 2xvm_A Tellurite resistance pr 89.5 1.5 5.3E-05 34.7 8.3 99 55-167 33-133 (199)
53 3g5t_A Trans-aconitate 3-methy 89.2 0.57 2E-05 40.6 5.9 107 55-168 37-147 (299)
54 2kw5_A SLR1183 protein; struct 89.2 5.4 0.00018 31.8 11.5 99 57-170 32-131 (202)
55 3ujc_A Phosphoethanolamine N-m 89.1 1.6 5.3E-05 36.5 8.4 136 55-204 56-205 (266)
56 4hc4_A Protein arginine N-meth 89.0 0.65 2.2E-05 42.8 6.4 122 35-169 65-188 (376)
57 3g5l_A Putative S-adenosylmeth 88.9 2.5 8.6E-05 35.2 9.6 99 55-170 45-145 (253)
58 1ve3_A Hypothetical protein PH 88.9 4.7 0.00016 32.6 11.0 118 36-170 23-142 (227)
59 3c3y_A Pfomt, O-methyltransfer 88.8 1.6 5.4E-05 36.8 8.3 109 55-171 71-182 (237)
60 1y8c_A S-adenosylmethionine-de 88.6 3.3 0.00011 33.9 10.0 102 55-171 38-143 (246)
61 2ex4_A Adrenal gland protein A 88.5 2.4 8.2E-05 35.2 9.1 134 55-200 80-219 (241)
62 3reo_A (ISO)eugenol O-methyltr 88.3 1.4 4.7E-05 39.9 8.0 95 54-170 203-301 (368)
63 3htx_A HEN1; HEN1, small RNA m 88.3 11 0.00037 38.7 15.0 144 55-207 722-899 (950)
64 1g6q_1 HnRNP arginine N-methyl 88.2 1.7 5.7E-05 38.7 8.4 122 35-169 20-144 (328)
65 3p9n_A Possible methyltransfer 88.0 3.4 0.00012 32.9 9.5 104 56-171 46-154 (189)
66 3q7e_A Protein arginine N-meth 87.5 1.5 5E-05 39.5 7.6 123 35-169 48-172 (349)
67 3kkz_A Uncharacterized protein 87.3 3 0.0001 35.1 9.2 134 55-202 47-193 (267)
68 3bus_A REBM, methyltransferase 87.2 3.1 0.00011 35.0 9.2 116 39-169 48-165 (273)
69 3duw_A OMT, O-methyltransferas 87.0 6.6 0.00022 31.9 10.9 105 55-172 59-169 (223)
70 2avd_A Catechol-O-methyltransf 87.0 2.9 9.8E-05 34.3 8.6 108 55-171 70-180 (229)
71 2y1w_A Histone-arginine methyl 86.9 2.2 7.5E-05 38.2 8.4 121 36-169 33-154 (348)
72 2p7i_A Hypothetical protein; p 86.2 6.7 0.00023 31.9 10.5 96 56-171 44-142 (250)
73 2yxd_A Probable cobalt-precorr 85.5 8.2 0.00028 29.7 10.3 118 55-203 36-154 (183)
74 3l8d_A Methyltransferase; stru 85.2 4.6 0.00016 33.1 9.0 128 55-200 54-194 (242)
75 3d2l_A SAM-dependent methyltra 85.0 4.9 0.00017 32.9 9.1 100 56-171 35-138 (243)
76 1pjz_A Thiopurine S-methyltran 85.0 7.5 0.00026 31.5 10.2 134 56-201 24-171 (203)
77 3thr_A Glycine N-methyltransfe 84.8 1.6 5.4E-05 37.4 6.1 124 40-171 44-176 (293)
78 3dh0_A SAM dependent methyltra 84.8 9.7 0.00033 30.6 10.7 132 55-200 38-175 (219)
79 1sui_A Caffeoyl-COA O-methyltr 83.7 2.5 8.7E-05 35.9 6.9 109 55-171 80-191 (247)
80 2o57_A Putative sarcosine dime 83.2 5.1 0.00018 34.2 8.7 179 55-249 83-276 (297)
81 1vl5_A Unknown conserved prote 82.8 3.6 0.00012 34.4 7.5 99 55-168 38-138 (260)
82 3g07_A 7SK snRNA methylphospha 82.5 2.5 8.7E-05 36.6 6.5 65 105-173 154-223 (292)
83 1nkv_A Hypothetical protein YJ 81.8 4.3 0.00015 33.7 7.5 101 55-169 37-139 (256)
84 3r0q_C Probable protein argini 81.7 2.8 9.5E-05 38.0 6.7 121 36-169 46-168 (376)
85 3fzg_A 16S rRNA methylase; met 81.5 3.7 0.00013 34.6 6.8 147 39-202 34-184 (200)
86 3lpm_A Putative methyltransfer 81.4 8.8 0.0003 32.3 9.5 125 55-200 50-195 (259)
87 3e8s_A Putative SAM dependent 80.9 12 0.00039 30.0 9.7 98 55-170 53-152 (227)
88 3bxo_A N,N-dimethyltransferase 80.8 3.2 0.00011 33.9 6.3 110 39-170 28-141 (239)
89 3fpf_A Mtnas, putative unchara 80.6 4.4 0.00015 36.1 7.5 99 54-171 122-223 (298)
90 3m70_A Tellurite resistance pr 80.6 5.4 0.00018 33.9 7.9 99 55-168 121-221 (286)
91 1zx0_A Guanidinoacetate N-meth 79.7 5.1 0.00018 33.1 7.2 134 56-200 62-204 (236)
92 3tr6_A O-methyltransferase; ce 79.5 8.5 0.00029 31.2 8.5 107 56-171 66-175 (225)
93 3orh_A Guanidinoacetate N-meth 78.3 0.83 2.8E-05 38.5 1.8 103 56-170 62-170 (236)
94 1dus_A MJ0882; hypothetical pr 78.0 20 0.00068 27.6 10.0 104 55-171 53-158 (194)
95 3o4f_A Spermidine synthase; am 77.8 5.7 0.0002 35.3 7.2 106 53-161 82-220 (294)
96 3sm3_A SAM-dependent methyltra 77.7 11 0.00037 30.4 8.6 104 55-168 31-139 (235)
97 1fp1_D Isoliquiritigenin 2'-O- 77.1 9.8 0.00033 34.0 8.8 94 54-169 209-306 (372)
98 4e2x_A TCAB9; kijanose, tetron 76.8 21 0.00073 32.1 11.1 144 39-203 94-251 (416)
99 3bkx_A SAM-dependent methyltra 75.3 8.3 0.00028 32.3 7.4 118 38-168 29-157 (275)
100 2pxx_A Uncharacterized protein 74.5 8.9 0.0003 30.5 7.1 111 41-169 32-158 (215)
101 1l3i_A Precorrin-6Y methyltran 73.9 28 0.00095 26.7 12.3 122 55-202 34-156 (192)
102 3ccf_A Cyclopropane-fatty-acyl 73.6 10 0.00035 32.0 7.6 95 55-170 58-154 (279)
103 3e05_A Precorrin-6Y C5,15-meth 73.6 32 0.0011 27.3 12.8 121 55-202 41-164 (204)
104 3r3h_A O-methyltransferase, SA 73.1 1.8 6.1E-05 36.7 2.6 108 55-171 61-171 (242)
105 3u81_A Catechol O-methyltransf 72.9 7.9 0.00027 31.6 6.5 109 55-171 59-171 (221)
106 3sso_A Methyltransferase; macr 72.6 6.9 0.00024 36.6 6.6 109 39-169 204-323 (419)
107 2i62_A Nicotinamide N-methyltr 72.5 3.3 0.00011 34.4 4.1 140 56-200 58-233 (265)
108 3tfw_A Putative O-methyltransf 72.3 23 0.00077 29.6 9.4 104 55-171 64-171 (248)
109 3cbg_A O-methyltransferase; cy 71.4 16 0.00055 30.1 8.2 109 55-172 73-184 (232)
110 3b3j_A Histone-arginine methyl 71.1 11 0.00036 35.6 7.7 121 36-169 141-262 (480)
111 1fp2_A Isoflavone O-methyltran 70.5 3.7 0.00013 36.4 4.2 95 54-170 188-289 (352)
112 2yqz_A Hypothetical protein TT 70.1 43 0.0015 27.3 11.0 99 55-169 40-140 (263)
113 2fca_A TRNA (guanine-N(7)-)-me 69.9 41 0.0014 27.2 10.3 125 56-200 40-173 (213)
114 3dr5_A Putative O-methyltransf 69.9 4 0.00014 34.0 4.0 104 57-172 59-165 (221)
115 3ntv_A MW1564 protein; rossman 69.7 12 0.00042 30.8 7.1 103 55-171 72-177 (232)
116 3gjy_A Spermidine synthase; AP 69.6 7.1 0.00024 35.0 5.8 102 57-169 92-199 (317)
117 2hnk_A SAM-dependent O-methylt 67.9 27 0.00094 28.6 8.9 109 55-171 61-182 (239)
118 3bkw_A MLL3908 protein, S-aden 67.3 11 0.00039 30.6 6.3 98 55-170 44-144 (243)
119 2a14_A Indolethylamine N-methy 66.9 20 0.00069 30.1 8.0 69 135-203 159-236 (263)
120 1zg3_A Isoflavanone 4'-O-methy 66.2 19 0.00065 31.8 8.0 95 54-170 193-294 (358)
121 3grz_A L11 mtase, ribosomal pr 65.2 49 0.0017 26.1 10.3 129 39-200 48-179 (205)
122 3bzb_A Uncharacterized protein 64.3 60 0.002 27.6 10.6 106 56-167 81-202 (281)
123 1yzh_A TRNA (guanine-N(7)-)-me 64.1 35 0.0012 27.4 8.6 125 55-200 42-176 (214)
124 1xxl_A YCGJ protein; structura 63.9 26 0.0009 28.7 8.0 131 55-200 22-168 (239)
125 3c3p_A Methyltransferase; NP_9 63.3 5 0.00017 32.5 3.2 101 55-170 57-160 (210)
126 3uwp_A Histone-lysine N-methyl 62.5 63 0.0022 30.2 10.9 116 40-168 161-286 (438)
127 3mti_A RRNA methylase; SAM-dep 62.2 22 0.00076 27.6 6.9 114 40-169 11-134 (185)
128 3i9f_A Putative type 11 methyl 62.1 31 0.001 26.3 7.6 92 55-169 18-111 (170)
129 4dzr_A Protein-(glutamine-N5) 61.3 26 0.0009 27.5 7.3 22 150-171 144-166 (215)
130 3frh_A 16S rRNA methylase; met 61.0 45 0.0015 28.9 9.0 153 33-202 85-238 (253)
131 2gpy_A O-methyltransferase; st 60.8 25 0.00086 28.6 7.3 101 56-170 56-160 (233)
132 3evz_A Methyltransferase; NYSG 60.5 41 0.0014 27.0 8.5 124 55-202 56-202 (230)
133 2gb4_A Thiopurine S-methyltran 59.7 70 0.0024 26.9 10.1 134 56-201 70-222 (252)
134 2nxc_A L11 mtase, ribosomal pr 58.4 50 0.0017 27.6 8.9 130 38-200 107-238 (254)
135 2gs9_A Hypothetical protein TT 57.3 69 0.0024 25.2 9.6 103 42-170 27-132 (211)
136 2b3t_A Protein methyltransfera 55.4 91 0.0031 26.0 12.2 119 56-200 111-257 (276)
137 1vlm_A SAM-dependent methyltra 54.8 79 0.0027 25.2 9.3 121 55-200 48-182 (219)
138 3iv6_A Putative Zn-dependent a 53.0 71 0.0024 27.4 9.1 102 55-170 46-148 (261)
139 2fhp_A Methylase, putative; al 52.5 29 0.001 26.7 6.0 107 55-171 45-155 (187)
140 2esr_A Methyltransferase; stru 52.3 58 0.002 24.9 7.8 105 55-171 32-139 (177)
141 4fsd_A Arsenic methyltransfera 51.3 35 0.0012 30.5 7.1 109 56-169 85-202 (383)
142 3dxy_A TRNA (guanine-N(7)-)-me 49.8 69 0.0023 26.2 8.2 105 55-169 35-149 (218)
143 2p35_A Trans-aconitate 2-methy 48.3 27 0.00094 28.5 5.5 95 55-170 34-132 (259)
144 2ld4_A Anamorsin; methyltransf 47.9 53 0.0018 25.2 6.9 116 56-202 14-131 (176)
145 3adn_A Spermidine synthase; am 47.4 54 0.0018 28.4 7.5 108 53-169 82-197 (294)
146 2ozv_A Hypothetical protein AT 46.5 81 0.0028 26.4 8.3 125 41-171 23-171 (260)
147 2zfu_A Nucleomethylin, cerebra 45.7 1.1E+02 0.0037 24.1 8.8 106 55-201 68-174 (215)
148 2lqo_A Putative glutaredoxin R 45.7 62 0.0021 23.0 6.4 74 78-159 6-85 (92)
149 3eey_A Putative rRNA methylase 45.6 1E+02 0.0036 23.8 8.6 103 56-169 24-138 (197)
150 3hm2_A Precorrin-6Y C5,15-meth 44.9 98 0.0033 23.3 11.2 99 55-170 26-127 (178)
151 4dcm_A Ribosomal RNA large sub 43.5 75 0.0026 28.5 8.0 102 56-168 224-332 (375)
152 2avn_A Ubiquinone/menaquinone 43.0 76 0.0026 26.2 7.5 110 39-171 42-153 (260)
153 3bwc_A Spermidine synthase; SA 41.4 31 0.001 30.0 4.9 107 55-170 96-210 (304)
154 3ege_A Putative methyltransfer 40.6 91 0.0031 25.7 7.7 124 55-200 35-172 (261)
155 1xj5_A Spermidine synthase 1; 39.2 34 0.0012 30.4 4.9 107 54-169 120-234 (334)
156 2ipx_A RRNA 2'-O-methyltransfe 39.1 75 0.0026 25.7 6.8 131 55-200 78-211 (233)
157 1mjf_A Spermidine synthase; sp 35.2 65 0.0022 27.5 5.9 106 54-170 75-193 (281)
158 3mq2_A 16S rRNA methyltransfer 34.1 1.7E+02 0.0058 23.0 9.2 130 55-200 28-178 (218)
159 1o9g_A RRNA methyltransferase; 32.6 95 0.0032 25.4 6.4 22 147-168 191-212 (250)
160 3lbf_A Protein-L-isoaspartate 31.9 72 0.0024 25.1 5.4 97 55-172 78-176 (210)
161 3cvo_A Methyltransferase-like 31.6 2.2E+02 0.0074 23.4 9.4 109 55-170 31-154 (202)
162 3p2e_A 16S rRNA methylase; met 31.2 1.3E+02 0.0043 24.6 6.9 131 55-200 25-179 (225)
163 2b2c_A Spermidine synthase; be 30.5 1.4E+02 0.0047 26.1 7.4 107 54-170 108-222 (314)
164 3njr_A Precorrin-6Y methylase; 30.1 2.1E+02 0.007 22.7 10.6 118 55-200 56-174 (204)
165 2i7c_A Spermidine synthase; tr 29.7 1E+02 0.0034 26.3 6.2 108 54-170 78-192 (283)
166 1ws6_A Methyltransferase; stru 29.6 1.7E+02 0.0058 21.6 8.1 103 56-171 43-148 (171)
167 2g72_A Phenylethanolamine N-me 29.3 2.4E+02 0.0084 23.3 10.3 67 134-200 176-250 (289)
168 3cc8_A Putative methyltransfer 29.2 1.1E+02 0.0039 23.9 6.2 155 55-234 33-209 (230)
169 1af7_A Chemotaxis receptor met 29.2 45 0.0015 28.8 3.9 38 134-171 215-253 (274)
170 4hg2_A Methyltransferase type 29.0 2.5E+02 0.0087 23.4 10.5 91 55-167 40-132 (257)
171 2as0_A Hypothetical protein PH 28.4 2.8E+02 0.0097 24.5 9.3 107 55-169 218-334 (396)
172 2ift_A Putative methylase HI07 27.7 44 0.0015 26.7 3.4 104 56-170 55-163 (201)
173 2qfm_A Spermine synthase; sper 26.7 1.4E+02 0.0048 27.0 6.9 110 53-170 187-314 (364)
174 3ua3_A Protein arginine N-meth 25.1 1.9E+02 0.0063 29.0 7.8 126 35-168 386-532 (745)
175 2kzc_A Uncharacterized protein 24.9 37 0.0013 24.6 2.0 34 224-257 15-50 (85)
176 2pt6_A Spermidine synthase; tr 24.6 1.8E+02 0.006 25.4 7.0 107 54-170 116-230 (321)
177 1ej0_A FTSJ; methyltransferase 24.4 1.5E+02 0.005 21.8 5.8 101 55-169 23-135 (180)
178 2igt_A SAM dependent methyltra 23.3 3.7E+02 0.013 23.4 9.6 105 56-170 155-272 (332)
179 3ckk_A TRNA (guanine-N(7)-)-me 23.3 2.5E+02 0.0087 22.9 7.5 108 55-169 47-167 (235)
180 1yb2_A Hypothetical protein TA 21.4 1.4E+02 0.0049 24.8 5.6 117 55-200 111-231 (275)
181 1xdz_A Methyltransferase GIDB; 21.4 2.6E+02 0.0087 22.5 7.0 122 56-200 72-196 (240)
182 1vbf_A 231AA long hypothetical 20.6 2.2E+02 0.0076 22.5 6.4 94 55-171 71-166 (231)
No 1
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=100.00 E-value=4.3e-41 Score=307.94 Aligned_cols=215 Identities=21% Similarity=0.336 Sum_probs=178.1
Q ss_pred CCCCCCCCccCHhhhhcCCCCCcc-h--------hh---------------hhhHHHHHHHHHHHHHHHHHhhccCCcce
Q 024907 2 CNAYAEPLFVDPYAGCLVPPDVQM-D--------LK---------------KYSHHYCLTTKFIDDKLLRTVNHMDGLKQ 57 (260)
Q Consensus 2 ~s~r~~~l~~Dp~A~~~~~~~~~~-~--------~~---------------~~~~~~~~Rtr~iDd~l~~~~~~~~g~~Q 57 (260)
+++++++||+||||..|+++.++. . +. .+..++++||++||++++++++ .|++|
T Consensus 28 es~~~~~l~~Dp~A~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rt~~~d~~v~~~~~--~g~~Q 105 (310)
T 2uyo_A 28 ETDRPDALIRDPYAKLLVTNTGAGALWEAMLDPSMVAKVEAIDAEAAAMVEHMRSYQAVRTNFFDTYFNNAVI--DGIRQ 105 (310)
T ss_dssp HHTSTTCSSCCTTHHHHHHTTSSTTHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCCE
T ss_pred HhCCCCCCCCCHHHHHHhhhhccchhhHHhhccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHH--hCCCe
Confidence 567899999999999999876543 1 00 1345789999999999999997 57899
Q ss_pred EEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCeEEE
Q 024907 58 VVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPSVWA 137 (260)
Q Consensus 58 VV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i 137 (260)
||+||||||||+||+++|.+++|||||+|+|++.|+++|.+.+..++.+++++++|+.. +|.+.|..+|||+++||+||
T Consensus 106 vV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i 184 (310)
T 2uyo_A 106 FVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTAWL 184 (310)
T ss_dssp EEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEE
T ss_pred EEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEEEE
Confidence 99999999999999998878999999999999999999998766556789999999987 89999999999999999999
Q ss_pred EccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhh--------h----hhh--cC---------CCcc-h-hHHHHH
Q 024907 138 IQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--------A----ETE--FG---------NKST-T-EKWMDK 191 (260)
Q Consensus 138 ~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~--------~----~~~--~~---------~~~~-~-~~w~~~ 191 (260)
+||| +||+++++.+||+.|++.+++||.+++|+...- . ... .+ +... + ..-..+
T Consensus 185 ~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 264 (310)
T 2uyo_A 185 AEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVVAD 264 (310)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCCCHHH
T ss_pred EechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHHHH
Confidence 9999 799999999999999999899999999974310 1 101 01 1010 1 122468
Q ss_pred HHHhCCceeeeeCHHHHHHHcCCCCCCc
Q 024907 192 LFMSNGFGVGMVSYKEVASSLGKELAPG 219 (260)
Q Consensus 192 ~~~~~Gw~~~~~~~~~~~~~~g~~~~~~ 219 (260)
+|.++||+....++.++.++||+++|.+
T Consensus 265 ~f~~~G~~~~~~~~~e~~~~yg~~~~~~ 292 (310)
T 2uyo_A 265 WLNRHGWRATAQSAPDEMRRVGRWGDGV 292 (310)
T ss_dssp HHTTTTEEEEEEEHHHHHHHTTCCCTTS
T ss_pred HHHHCcCccccCCHHHHHHHcCCCCCCc
Confidence 8999999966889999999999987653
No 2
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=100.00 E-value=4.6e-38 Score=290.48 Aligned_cols=205 Identities=15% Similarity=0.155 Sum_probs=161.5
Q ss_pred CCCCCccCHhhhhcCCCCCcchhhhhhHHHHHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCC--CCcEEEE
Q 024907 5 YAEPLFVDPYAGCLVPPDVQMDLKKYSHHYCLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWP--TSTIIFD 82 (260)
Q Consensus 5 r~~~l~~Dp~A~~~~~~~~~~~~~~~~~~~~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~--~~~~~~E 82 (260)
-..+||+|||+..|+++....-...+.+++++||++||+.+.+|++.+++.+||||||||||||+|||+++ .+++|||
T Consensus 41 v~~gY~~Dpf~~~Fv~~~~~rr~P~inrG~~~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~E 120 (334)
T 3iei_A 41 VSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFE 120 (334)
T ss_dssp HHHTSSCCSSGGGTSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEE
T ss_pred HHcCCCCCHHHHHHcCcccCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEE
Confidence 34589999999999986521111225678999999999999999987657889999999999999999775 4799999
Q ss_pred eChHHHHHHHHHHHhhcCC--------------------CCCCceeEEeccCCC-chHHHHHHhcCCCCCCCeEEEEccC
Q 024907 83 ISPERIFKISAEKLEGVGA--------------------KIPRSCLFLHVPLES-SNIQQALRAKGFNGNRPSVWAIQGL 141 (260)
Q Consensus 83 vD~P~v~~~K~~~l~~~~~--------------------~~p~~~~~v~vd~~~-~dw~~~L~~~Gfd~~~Ptl~i~EGv 141 (260)
||+|+|+++|+++|++.+. ..+.+++++++|+.. ++|.+.|.++|||++.||+||+|||
T Consensus 121 VD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGv 200 (334)
T 3iei_A 121 VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECV 200 (334)
T ss_dssp EECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESC
T ss_pred CCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchh
Confidence 9999999999999986210 014589999999975 3566789999999999999999999
Q ss_pred -CCCCHHHHHHHHHHHHhccCCCcEEEEeCChh---hhhh--------hcCCCcc----hhHHHHHHHHhCCcee-eeeC
Q 024907 142 -PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW---LAET--------EFGNKST----TEKWMDKLFMSNGFGV-GMVS 204 (260)
Q Consensus 142 -~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~---~~~~--------~~~~~~~----~~~w~~~~~~~~Gw~~-~~~~ 204 (260)
+||+++++.+||++|++.+++|+.++||+..+ ..+. ..++.+. +..-..++|.++||++ ++.+
T Consensus 201 L~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d 280 (334)
T 3iei_A 201 LVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVD 280 (334)
T ss_dssp GGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCTTSHHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEE
T ss_pred hhCCCHHHHHHHHHHHHHhCCCceEEEEeccCCCCHHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeec
Confidence 89999999999999999999999999997532 1111 1122211 1111357889999996 8888
Q ss_pred HHHHH
Q 024907 205 YKEVA 209 (260)
Q Consensus 205 ~~~~~ 209 (260)
..++.
T Consensus 281 ~~~~~ 285 (334)
T 3iei_A 281 MMELY 285 (334)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87775
No 3
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=100.00 E-value=4.9e-36 Score=276.98 Aligned_cols=204 Identities=13% Similarity=-0.033 Sum_probs=154.6
Q ss_pred CCCCCCCccCHhhhhcCCCC------------------Cc-------ch----hhhhhHHHHHHHHHHHHHHHHHhhccC
Q 024907 3 NAYAEPLFVDPYAGCLVPPD------------------VQ-------MD----LKKYSHHYCLTTKFIDDKLLRTVNHMD 53 (260)
Q Consensus 3 s~r~~~l~~Dp~A~~~~~~~------------------~~-------~~----~~~~~~~~~~Rtr~iDd~l~~~~~~~~ 53 (260)
|....+|++||||..|+... .+ .. ...+..++++||++||+.+.++++. +
T Consensus 18 sav~~gY~~D~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~~~P~in~g~~~Rt~~iD~~v~~fl~~-~ 96 (334)
T 1rjd_A 18 AAISVGYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGKVDKAMRSSFPVMNYGTYLRTVGIDAAILEFLVA-N 96 (334)
T ss_dssp HHHHHTSCCCTTTTTCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred HHHHcCCCCcHHHHhhhhcccccccccchhhhhhhhhhhhhhccccccchhccCchHHHHHHHHHHHHHHHHHHHHHH-C
Confidence 45567999999999888630 00 00 1123567899999999999999975 4
Q ss_pred CcceEEEeCCCCCCcccccCCC-CCcEEEEeChHHHHHHHHHHHhhcCCC------------------CCCceeEEeccC
Q 024907 54 GLKQVVLLTDGMDTRPYRLNWP-TSTIIFDISPERIFKISAEKLEGVGAK------------------IPRSCLFLHVPL 114 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl~~~-~~~~~~EvD~P~v~~~K~~~l~~~~~~------------------~p~~~~~v~vd~ 114 (260)
+.+||||||||||||+|||+++ .+++|||||+|+|+++|+++|++.+.. .+.+++++++|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 6899999999999999999874 489999999999999999999885210 135899999999
Q ss_pred CCchHHHH-HHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChh------hh--------h-h
Q 024907 115 ESSNIQQA-LRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW------LA--------E-T 177 (260)
Q Consensus 115 ~~~dw~~~-L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~------~~--------~-~ 177 (260)
...+|.+. |.+.| |++.||+||+||| +||+++++.+||++|++.+++|+.++||+..+ .. . .
T Consensus 177 ~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~r 255 (334)
T 1rjd_A 177 NDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLKESR 255 (334)
T ss_dssp TCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCCCSTTCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCcchHHHHHHHHhhccc
Confidence 97789877 46677 9999999999999 79999999999999999986666778997433 11 0 1
Q ss_pred hcCCCc----chhHHHHHHHHhCCceeeeeCHHHHH
Q 024907 178 EFGNKS----TTEKWMDKLFMSNGFGVGMVSYKEVA 209 (260)
Q Consensus 178 ~~~~~~----~~~~w~~~~~~~~Gw~~~~~~~~~~~ 209 (260)
..++.+ .+.....++|.++||. ++.+..+..
T Consensus 256 g~~l~~~~~y~s~~~~~~rl~~~Gf~-~a~d~~~~y 290 (334)
T 1rjd_A 256 NLEMPTLMTYNSKEKYASRWSAAPNV-IVNDMWEIF 290 (334)
T ss_dssp CCCCTTTTTTCSHHHHHGGGTTSSEE-EEEEHHHHH
T ss_pred CCcccccccCCCHHHHHHHHHHCCCC-cccCHHHHH
Confidence 111221 1223345778888997 555555543
No 4
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=3.7e-30 Score=257.03 Aligned_cols=196 Identities=18% Similarity=0.156 Sum_probs=150.1
Q ss_pred HhhhhcCCCCCcchhhhhhHHHHHHHHHHHHHHHHHhhcc--CCcceEEEeCCCCCCcccccC---------CCCCcEEE
Q 024907 13 PYAGCLVPPDVQMDLKKYSHHYCLTTKFIDDKLLRTVNHM--DGLKQVVLLTDGMDTRPYRLN---------WPTSTIIF 81 (260)
Q Consensus 13 p~A~~~~~~~~~~~~~~~~~~~~~Rtr~iDd~l~~~~~~~--~g~~QVV~LGaGlDTR~~Rl~---------~~~~~~~~ 81 (260)
|||..|+++..+... .+.+++.+|++.||+.+.+|++.+ .+.+|||+||||||||+|||. |+.+++||
T Consensus 65 ~~a~~fv~~~~~r~p-~inrG~~~R~~~~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~ 143 (695)
T 2zwa_A 65 EYFKFFVPKKIKRSP-CINRGYWLRLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFI 143 (695)
T ss_dssp CSGGGGCSSCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEE
T ss_pred hHHHHhCCCccccCc-eEchhhhHHHHHHHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEE
Confidence 999999987643211 145788999999999999999864 368999999999999999993 34589999
Q ss_pred EeChHHHHHHHHHHHhhcC-------------CCCC--------CceeEEeccCCCc-hHHHHHHhcCC-CCCCCeEEEE
Q 024907 82 DISPERIFKISAEKLEGVG-------------AKIP--------RSCLFLHVPLESS-NIQQALRAKGF-NGNRPSVWAI 138 (260)
Q Consensus 82 EvD~P~v~~~K~~~l~~~~-------------~~~p--------~~~~~v~vd~~~~-dw~~~L~~~Gf-d~~~Ptl~i~ 138 (260)
|||+|+|+++|+++|++.. ..++ .+++++++|+... +|.+.|..+|| |++.||+||+
T Consensus 144 EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~ 223 (695)
T 2zwa_A 144 DIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVA 223 (695)
T ss_dssp EEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEE
T ss_pred ECccHHHHHHHHHHHHcChHHHHhhccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEee
Confidence 9999999999999998432 0111 3789999999864 56788999999 9999999999
Q ss_pred ccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhh------hhh--------hcCCCc----chhHHHHHHHHhCCce
Q 024907 139 QGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL------AET--------EFGNKS----TTEKWMDKLFMSNGFG 199 (260)
Q Consensus 139 EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~------~~~--------~~~~~~----~~~~w~~~~~~~~Gw~ 199 (260)
||| +||+++++.+||++++++ ++++.+.||+..+. ... ..++.+ .+..-..++|..+||.
T Consensus 224 Egvl~Yl~~~~~~~ll~~~~~~-~~~~~~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~ 302 (695)
T 2zwa_A 224 EVSLAYMKPERSDSIIEATSKM-ENSHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFA 302 (695)
T ss_dssp ESSGGGSCHHHHHHHHHHHHTS-SSEEEEEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCC
T ss_pred eeEEEEcCHHHHHHHHHHHhhC-CCceEEEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCC
Confidence 999 799999999999999976 46778888964321 110 011111 0111135789999998
Q ss_pred -eeeeCHHHHHH
Q 024907 200 -VGMVSYKEVAS 210 (260)
Q Consensus 200 -~~~~~~~~~~~ 210 (260)
+...+..++..
T Consensus 303 ~v~~~~~~~~y~ 314 (695)
T 2zwa_A 303 YVNVGDMFQLWE 314 (695)
T ss_dssp EEEEEEHHHHHH
T ss_pred CcceeeHHHHHh
Confidence 57777766543
No 5
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.89 E-value=1.3e-08 Score=91.40 Aligned_cols=127 Identities=8% Similarity=0.131 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCccccc-----CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEec
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-----NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHV 112 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl-----~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~v 112 (260)
.|+...++..... .|++||+-||||++|..... -+| +.+++-||. |.+++.+++++...+ +.+.+++..
T Consensus 64 ~fl~rav~~l~~~-~g~~q~LDLGcG~pT~~~~~~la~~~~P-~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~a 138 (277)
T 3giw_A 64 DWMNRAVAHLAKE-AGIRQFLDIGTGIPTSPNLHEIAQSVAP-ESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHHHT-SCCCEEEEESCCSCCSSCHHHHHHHHCT-TCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEEC
T ss_pred HHHHHHHHHhccc-cCCCEEEEeCCCCCcccHHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEe
Confidence 5666666554422 57899999999999864332 245 578888888 899999988887642 347899999
Q ss_pred cCCCch--HHHHHHhcCCCCCCCeEEEEccC-CCCCHHH-HHHHHHHHHhccCCCcEEEEeC
Q 024907 113 PLESSN--IQQALRAKGFNGNRPSVWAIQGL-PVMTLAS-FEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 113 d~~~~d--w~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~-~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
|+.... |...+...+||.++|+.+++-++ .|++.++ ...+++.+.+..+|||.+++..
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 997422 12233457899999999999999 5898765 5889999999999999988763
No 6
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.63 E-value=3.8e-07 Score=80.93 Aligned_cols=129 Identities=9% Similarity=0.048 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCc---cccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCcee
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTR---PYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCL 108 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR---~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~ 108 (260)
..+..+++..+...... .+..||+-||||..|. ..++ ..| +.+++-||. |.+++..++.+... .+++
T Consensus 59 ~~~~~~~~~~~~~l~~~-~~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~ 131 (274)
T 2qe6_A 59 IENRKVLVRGVRFLAGE-AGISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKD-----PNTA 131 (274)
T ss_dssp HHHHHHHHHHHHHHHTT-TCCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTC-----TTEE
T ss_pred HHHhHHHHHHHHHHhhc-cCCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCC-----CCeE
Confidence 34456777766554312 4668999999999553 2233 134 466777777 89999888877432 3789
Q ss_pred EEeccCCCchHHHHHH--hcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 109 FLHVPLESSNIQQALR--AKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 109 ~v~vd~~~~dw~~~L~--~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
++..|+...+|.-... ...++.+.+.++++.++ .|++.++...+|+.+.+...||+.+++..
T Consensus 132 ~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 132 VFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp EEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999997544431100 12367678999999999 58887778899999999888999877653
No 7
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.72 E-value=0.026 Score=46.75 Aligned_cols=165 Identities=13% Similarity=0.095 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccC-CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCC--CCceeEEe
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLH 111 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~--p~~~~~v~ 111 (260)
.|..++-+.+.. .+...|+-+|||.=.-...+. ......++=||. |++++.-++.++..+... ..+++++.
T Consensus 16 ~~~~~l~~~l~~-----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 16 QRMNGVVAALKQ-----SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp HHHHHHHHHHHH-----TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHh-----cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 344444444433 123589999999766555542 112345666665 556665555554432110 12688888
Q ss_pred ccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhh-h---h------c-
Q 024907 112 VPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE-T---E------F- 179 (260)
Q Consensus 112 vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~-~---~------~- 179 (260)
.|+...+. ....|| ++++-.+ .|++.+....+++.+.+...||+.++......... . . .
T Consensus 91 ~d~~~~~~----~~~~fD-----~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~ 161 (217)
T 3jwh_A 91 GALTYQDK----RFHGYD-----AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKD 161 (217)
T ss_dssp CCTTSCCG----GGCSCS-----EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------
T ss_pred CCcccccc----cCCCcC-----EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccc
Confidence 88753221 112233 4445555 68888888999999999988988766543221100 0 0 0
Q ss_pred ---CCC-cchhHHHHHHHHhCCceeeeeCHHHHHHHcCC
Q 024907 180 ---GNK-STTEKWMDKLFMSNGFGVGMVSYKEVASSLGK 214 (260)
Q Consensus 180 ---~~~-~~~~~w~~~~~~~~Gw~~~~~~~~~~~~~~g~ 214 (260)
.+. ..-..|..+.+..+||+++....++.....|.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~~~~~g~ 200 (217)
T 3jwh_A 162 HRFEWTRSQFQNWANKITERFAYNVQFQPIGEADPEVGS 200 (217)
T ss_dssp CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCCCSSSCC
T ss_pred cccccCHHHHHHHHHHHHHHcCceEEEEecCCccCCCCc
Confidence 011 11336777899999999987655544333333
No 8
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.63 E-value=0.031 Score=46.25 Aligned_cols=165 Identities=10% Similarity=0.061 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCC-CCCcEEEEeCh-HHHHHHHHHHHhhcCCCC--CCceeEEe
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNW-PTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLH 111 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~-~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~--p~~~~~v~ 111 (260)
.|..++-+.+.. .+...|+-+|||.=.-...+.. .....++=||. |.+++.-++.+...+... ..+..++.
T Consensus 16 ~~~~~l~~~l~~-----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 16 QRLGTVVAVLKS-----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHH-----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE
T ss_pred HHHHHHHHHHhh-----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe
Confidence 344555555443 2235899999997665555521 12356666666 555555455544332110 01678888
Q ss_pred ccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhh----h-------hc
Q 024907 112 VPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE----T-------EF 179 (260)
Q Consensus 112 vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~----~-------~~ 179 (260)
.|+..... ....|| ++++-.+ .+++.++...+++.+.+...||+.++......... . ..
T Consensus 91 ~d~~~~~~----~~~~fD-----~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~ 161 (219)
T 3jwg_A 91 SSLVYRDK----RFSGYD-----AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRD 161 (219)
T ss_dssp CCSSSCCG----GGTTCS-----EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGC
T ss_pred Cccccccc----ccCCCC-----EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccC
Confidence 88753221 112243 4555555 68888888999999999988988666542211100 0 00
Q ss_pred ---CCC-cchhHHHHHHHHhCCceeeeeCHHHHHHHcCC
Q 024907 180 ---GNK-STTEKWMDKLFMSNGFGVGMVSYKEVASSLGK 214 (260)
Q Consensus 180 ---~~~-~~~~~w~~~~~~~~Gw~~~~~~~~~~~~~~g~ 214 (260)
.+. ..-..|....+..+||+++.....+....+|.
T Consensus 162 ~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~ 200 (219)
T 3jwg_A 162 HRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGS 200 (219)
T ss_dssp CTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCC
T ss_pred ceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCC
Confidence 011 11335667889999999987654443333443
No 9
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=96.05 E-value=0.064 Score=48.75 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=87.3
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...||-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. ..+++++..|+. +.+. . +||
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~l--~~~v~~~~~d~~-~~~p----~-~~D-- 270 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLERPPVAEEARELLTGRGL--ADRCEILPGDFF-ETIP----D-GAD-- 270 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTT-TCCC----S-SCS--
T ss_pred cCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcCHHHHHHHHHhhhhcCc--CCceEEeccCCC-CCCC----C-Cce--
Confidence 4578999999977655544 344 5778888889999887777766542 247899999986 2221 1 343
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCC--h---hh---hhhh----cCCCcchhHHHHHHHHhCC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP--A---WL---AETE----FGNKSTTEKWMDKLFMSNG 197 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~~--~---~~---~~~~----~~~~~~~~~w~~~~~~~~G 197 (260)
++++-.+ .|++.++...+|+.+.+...||+.++ .|.. . +. .+.. .+-+..+.....++|.+.|
T Consensus 271 ---~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 271 ---VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred ---EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 4455555 68998888899999999888988754 5532 1 00 0100 1112222222357889999
Q ss_pred cee-eee
Q 024907 198 FGV-GMV 203 (260)
Q Consensus 198 w~~-~~~ 203 (260)
|+. ++.
T Consensus 348 f~~~~~~ 354 (369)
T 3gwz_A 348 LRVERSL 354 (369)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 986 443
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.99 E-value=0.073 Score=46.35 Aligned_cols=116 Identities=14% Similarity=0.082 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCccccc--CC-CCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccC
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NW-PTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPL 114 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl--~~-~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~ 114 (260)
..+..++.+++. +| ..|+-||||.=.-...| .. ..+.+++-||. |++++.-++.++..+. ..+++++..|+
T Consensus 58 ~~i~~l~~~~~~--~~-~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~--~~~v~~~~~D~ 132 (261)
T 4gek_A 58 SMIGMLAERFVQ--PG-TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA--PTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHCC--TT-CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCT
T ss_pred HHHHHHHHHhCC--CC-CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc--CceEEEeeccc
Confidence 345556666654 34 58999999876433333 11 23788999998 6777776666666543 23688998887
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeC
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GEL 170 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~ 170 (260)
.. + +...-.++++-.+ .++++++...+|+.|.+...||+.++ .|.
T Consensus 133 ~~--~---------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 133 RD--I---------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp TT--C---------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc--c---------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 52 1 1112346666556 58888888889999999888888765 453
No 11
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.76 E-value=0.21 Score=42.67 Aligned_cols=100 Identities=16% Similarity=0.106 Sum_probs=61.5
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..| +.+++=||. |.+++.-++.+...+. .++.++..|+.. +. +..+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~--~~-------~~~~ 104 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGI---KNVKFLQANIFS--LP-------FEDS 104 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGG--CC-------SCTT
T ss_pred CCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEccccc--CC-------CCCC
Confidence 458999999976544444 233 466777776 5565555555555431 267888887652 11 2223
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
.--++++-.+ .+++.. ..+++.+.++..||+.+++.
T Consensus 105 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEE
Confidence 3446666666 456433 36788888888888877653
No 12
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.68 E-value=0.079 Score=48.00 Aligned_cols=135 Identities=10% Similarity=-0.026 Sum_probs=88.6
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...||-+|||.=.-...+ .+| +++..-.|+|+|++.-++.+...+ ..++++++.|+..+.+ ++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dlp~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~----------~~ 244 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYP-GCKITVFDIPEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPL----------PE 244 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEECHHHHHHHHHHSCC-----CCSEEEEESCTTTSCC----------CC
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccCHHHHHHHHHhhhhcc---cCceeeecCccccCCC----------CC
Confidence 4568999999987766666 466 678888899999988777665432 3489999999863211 22
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcE-EEEeCC--hh-----hhh---hh----cCCCcc-hhHHHHHHHHh
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCL-FLGELP--AW-----LAE---TE----FGNKST-TEKWMDKLFMS 195 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~-l~~d~~--~~-----~~~---~~----~~~~~~-~~~w~~~~~~~ 195 (260)
.-.+++...+.+++.++...+|+.+.+...||+. ++.|.. .. ... .. .+-+.. ...| .++|.+
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~-~~ll~~ 323 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHY-HMLLSS 323 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHH-HHHHHH
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHH-HHHHHH
Confidence 3355555555578988899999999998888885 557752 11 111 10 011112 2344 478999
Q ss_pred CCcee-eee
Q 024907 196 NGFGV-GMV 203 (260)
Q Consensus 196 ~Gw~~-~~~ 203 (260)
.||+. ++.
T Consensus 324 AGf~~v~v~ 332 (353)
T 4a6d_A 324 AGFRDFQFK 332 (353)
T ss_dssp HTCEEEEEE
T ss_pred CCCceEEEE
Confidence 99984 654
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.68 E-value=0.073 Score=48.24 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=74.0
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCch--HHHHHHhcCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN--IQQALRAKGFN 129 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~d--w~~~L~~~Gfd 129 (260)
+...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+++.+. +.+++++..|+...+ +. .+||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~p-----~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDLPQQLEMMRKQTAGLSG--SERIHGHGANLLDRDVPFP-----TGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHST-TCEEEEEECHHHHHHHHHHHTTCTT--GGGEEEEECCCCSSSCCCC-----CCCS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeCHHHHHHHHHHHHhcCc--ccceEEEEccccccCCCCC-----CCcC
Confidence 4578999999987666555 245 5778888889999877777665432 237899999987421 21 2344
Q ss_pred CCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 024907 130 GNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLF-LGEL 170 (260)
Q Consensus 130 ~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l-~~d~ 170 (260)
.+++...+.+++.++...+|+.+.+...||+.+ +.|.
T Consensus 251 ----~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 251 ----AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ----EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ----EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 445444445788888899999999988888875 5564
No 14
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.47 E-value=0.038 Score=49.20 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=85.5
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..| +.++.-+|.|++++.-++.+.+.+. ..+++++..|+. +.+.. +||
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-~~~p~-----~~D--- 237 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDLQGPASAAHRRFLDTGL--SGRAQVVVGSFF-DPLPA-----GAG--- 237 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTT-SCCCC-----SCS---
T ss_pred CCEEEEeCCChhHHHHHHHHHCC-CCeEEEecCHHHHHHHHHhhhhcCc--CcCeEEecCCCC-CCCCC-----CCc---
Confidence 468999999976655555 244 5667777889999887777766542 247899999986 22211 344
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCC--hh----hhhhh----cCCCcc-hhHHHHHHHHhCCce
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP--AW----LAETE----FGNKST-TEKWMDKLFMSNGFG 199 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~~--~~----~~~~~----~~~~~~-~~~w~~~~~~~~Gw~ 199 (260)
++++-.+ .|++.++..++|+.+.+...||+.++ .|.. .. ..+.. .+.+.. ...| .++|.+.||+
T Consensus 238 --~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~-~~ll~~aGf~ 314 (332)
T 3i53_A 238 --GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAEL-GELAAQAGLA 314 (332)
T ss_dssp --EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHH-HHHHHHTTEE
T ss_pred --EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHH-HHHHHHCCCE
Confidence 4444455 68998888999999999888888754 5642 11 00100 011112 2333 4788999998
Q ss_pred e-eee
Q 024907 200 V-GMV 203 (260)
Q Consensus 200 ~-~~~ 203 (260)
+ ++.
T Consensus 315 ~~~~~ 319 (332)
T 3i53_A 315 VRAAH 319 (332)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 5 443
No 15
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.20 E-value=0.38 Score=42.00 Aligned_cols=121 Identities=8% Similarity=-0.030 Sum_probs=75.6
Q ss_pred HHHHHH--HHHHHHHHhhccCCcceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeE
Q 024907 35 CLTTKF--IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLF 109 (260)
Q Consensus 35 ~~Rtr~--iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~ 109 (260)
..|.++ +...+...+. + ...|+-+|||.=.-...+ ....+.+++=||. |.+++.-++.+...+. +.++++
T Consensus 100 ~~~~~~~~~~~~l~~~l~--~-~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~ 174 (305)
T 3ocj_A 100 ATRERHGHFRRALQRHLR--P-GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL--AGQITL 174 (305)
T ss_dssp HHHHHHHHHHHHHHHHCC--T-TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT--GGGEEE
T ss_pred cchHHHHHHHHHHHhhCC--C-CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC--CCceEE
Confidence 344444 6666655443 3 357999999975544444 2222567777777 6666655555554432 235888
Q ss_pred EeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 110 LHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 110 v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
+..|+.. + .++ +.--++++-++ .|+ .++....+++.+.+...||+.+++..
T Consensus 175 ~~~d~~~--~-------~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 175 HRQDAWK--L-------DTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCGGG--C-------CCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECchhc--C-------Ccc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 8888752 1 122 34457777776 566 56777789999999888988877553
No 16
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.20 E-value=0.055 Score=45.32 Aligned_cols=131 Identities=8% Similarity=-0.045 Sum_probs=81.0
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+..+ +..++=||. |.+++.-++.+...+. ..+++++..|+.... . ...--
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~-----~-----~~~fD 134 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPK--AEYFSFVKEDVFTWR-----P-----TELFD 134 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGG--GGGEEEECCCTTTCC-----C-----SSCEE
T ss_pred CCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCC--CcceEEEECchhcCC-----C-----CCCee
Confidence 48999999976655555443 567888887 5666655555544211 136888888876311 0 11224
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
++++-++ .+++++....+++.+.+...||+.+++ ++..........+. .....+.++|..+||.+
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYK-VDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCC-CCHHHHHHHHGGGTEEE
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCcc-CCHHHHHHHHHHcCCeE
Confidence 6666666 588888889999999998888887664 44321100001111 22334568899999996
No 17
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.16 E-value=0.074 Score=46.40 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=66.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-||||.=.-...|... +..++=||. |.+++.-++.+...+.....+++++..|+..-. + ++.--
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~---------~-~~~fD 152 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA---------L-DKRFG 152 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC---------C-SCCEE
T ss_pred CcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC---------c-CCCcC
Confidence 37999999987765555322 345666665 556655555555432100036889999886311 1 11223
Q ss_pred EEE-EccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 135 VWA-IQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 135 l~i-~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
+++ .-++ .|+++++...+|+.+.+...||+.+++..
T Consensus 153 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 153 TVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 444 4455 57888888999999999888999888764
No 18
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.98 E-value=0.12 Score=46.43 Aligned_cols=100 Identities=7% Similarity=0.003 Sum_probs=68.8
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...|+-+|||.=.-...+ ..| +++++-+|.|+++. + +.++..+ ...+++++..|+. +.+. +||
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~-~-~~~~~~~--~~~~v~~~~~d~~-~~~p------~~D-- 249 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRAEVVA-R-HRLDAPD--VAGRWKVVEGDFL-REVP------HAD-- 249 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECHHHHT-T-CCCCCGG--GTTSEEEEECCTT-TCCC------CCS--
T ss_pred CCceEEEECCccCHHHHHHHHHCC-CCEEEEecCHHHhh-c-ccccccC--CCCCeEEEecCCC-CCCC------CCc--
Confidence 4568999999987665555 345 67889999998877 2 2222111 1246889999985 2221 455
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~ 170 (260)
++++-.+ .+++.++...+|+.+.+...||+.++ .|.
T Consensus 250 ---~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 250 ---VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred ---EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 4455555 57888888899999999888988764 554
No 19
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.97 E-value=1.7 Score=37.05 Aligned_cols=106 Identities=11% Similarity=-0.005 Sum_probs=64.3
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCC-CCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGF-NGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gf-d~~~ 132 (260)
...|+-+|||.=.-...+.......++=||. |++++.-++.+...+. ..+++++..|+.... + ..+.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~~~~~ 133 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR--RFKVFFRAQDSYGRH---------MDLGKE 133 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC--SSEEEEEESCTTTSC---------CCCSSC
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC--CccEEEEECCccccc---------cCCCCC
Confidence 3579999998654333332111235666666 4455544444444322 236788888876321 2 1222
Q ss_pred CeEEEEccC-CC--CCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 133 PSVWAIQGL-PV--MTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 133 Ptl~i~EGv-~Y--l~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
--++++-++ .| ...+....+++.+.+...||+.+++..+
T Consensus 134 fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 134 FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 345666666 46 5677889999999998889998887654
No 20
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.83 E-value=0.12 Score=43.41 Aligned_cols=117 Identities=12% Similarity=0.188 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
.++...+..... .....|+-+|||.=.-...+... +.+++=||. |++++.-++.+...+ .+.+++..|+...
T Consensus 28 ~~~~~~~~~~~~--~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~ 100 (252)
T 1wzn_A 28 DFVEEIFKEDAK--REVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEI 100 (252)
T ss_dssp HHHHHHHHHTCS--SCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGC
T ss_pred HHHHHHHHHhcc--cCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhc
Confidence 455666654322 22358999999976544444222 456777777 566655455555432 1577787776521
Q ss_pred hHHHHHHhcCCCCCCCeEEEEc-cC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh
Q 024907 118 NIQQALRAKGFNGNRPSVWAIQ-GL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA 172 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i~E-Gv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~ 172 (260)
. ++ +.--++++- +. .|++.++...+++.+.+...||+.++++.+.
T Consensus 101 ~---------~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 101 A---------FK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp C---------CC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c---------cC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 1 11 222355554 44 5788888899999999988899999988654
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.81 E-value=0.25 Score=40.03 Aligned_cols=101 Identities=6% Similarity=-0.010 Sum_probs=63.9
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+....+.+++=+|. |.+++.-++.++..+. ..+.+++..|+.... +..+.--
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~~~D 113 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL--NDRIQIVQGDVHNIP---------IEDNYAD 113 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECBTTBCS---------SCTTCEE
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc--cCceEEEEcCHHHCC---------CCccccc
Confidence 389999999876555552112466777776 5666655555555442 236888888886311 2223445
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
++++-++ .++ ++...+++.+.+...||+.+++.
T Consensus 114 ~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 114 LIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEE
Confidence 6666666 456 33456888888888888876653
No 22
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=93.80 E-value=2.9 Score=35.86 Aligned_cols=100 Identities=15% Similarity=0.087 Sum_probs=62.7
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 130 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~ 130 (260)
....|+-+|||.=.-...+ ..|.+.+++=+|. |..++.-++.+... +.+++++..|+.. |. + +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~--~~-------~-~ 87 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATE--IE-------L-N 87 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTT--CC-------C-S
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhh--cC-------c-C
Confidence 3468999999987655555 2343467777776 45555444444443 2278888888763 21 1 1
Q ss_pred CCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 131 NRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 131 ~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+.--++++-.+ .+++.. ..+++.+.+...||+.+++-
T Consensus 88 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp SCEEEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEE
T ss_pred CCeeEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 22346666666 466432 57888888888888877643
No 23
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=93.70 E-value=0.12 Score=42.41 Aligned_cols=126 Identities=10% Similarity=0.048 Sum_probs=74.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++-||. |++++.-++.+ +..++..|+.. +. . .+.-
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~--~~---~-----~~~f 103 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL---------GRPVRTMLFHQ--LD---A-----IDAY 103 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---------TSCCEECCGGG--CC---C-----CSCE
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc---------CCceEEeeecc--CC---C-----CCcE
Confidence 458999999976655555322 456677776 44444333322 23445555542 11 1 1222
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhh----cCCCcchhHHHHHHHHhCC-cee
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETE----FGNKSTTEKWMDKLFMSNG-FGV 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~----~~~~~~~~~w~~~~~~~~G-w~~ 200 (260)
-++++-++ .+++.++...+|+.+.+...||+.+++..+....... ..........+.++|..+| |++
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEE
Confidence 46666666 5888888899999999988899988776432111000 0011123344568899999 986
No 24
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.63 E-value=0.52 Score=41.90 Aligned_cols=136 Identities=12% Similarity=0.092 Sum_probs=86.2
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. ..+++++..|+..... ....+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~---~~~~~~---- 249 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDLPTTRDAARKTIHAHDL--GGRVEFFEKNLLDARN---FEGGAA---- 249 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTC--GGGEEEEECCTTCGGG---GTTCCE----
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHHhcCC--CCceEEEeCCcccCcc---cCCCCc----
Confidence 568999999976554444 345 4777888889988876666665432 2368899999874321 011223
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCC--h----h-hh---hhh----c-CCCcchhHHHHHHHHh
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP--A----W-LA---ETE----F-GNKSTTEKWMDKLFMS 195 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~~--~----~-~~---~~~----~-~~~~~~~~w~~~~~~~ 195 (260)
-++++-.+ .+++.++...+|+.+.+...||+.++ .|.. . + .. +.. . .-+..+.....++|.+
T Consensus 250 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 250 -DVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp -EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred -cEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 35555556 58888888999999999888888654 5532 1 1 11 100 0 1122233334588999
Q ss_pred CCceee
Q 024907 196 NGFGVG 201 (260)
Q Consensus 196 ~Gw~~~ 201 (260)
+||++.
T Consensus 329 aGf~~~ 334 (352)
T 3mcz_A 329 AGLAVG 334 (352)
T ss_dssp TTCEEE
T ss_pred CCCcee
Confidence 999863
No 25
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=93.51 E-value=0.6 Score=37.70 Aligned_cols=102 Identities=12% Similarity=-0.031 Sum_probs=64.5
Q ss_pred cceEEEeCCCCCCcccc-cCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYR-LNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~R-l~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||--.-... +..+ +.+++=||. |++++.-++.+...+ .+.+++..|+.... +..+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~~~~ 89 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLP---------FKDES 89 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCC---------SCTTC
T ss_pred CCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCC---------CCCCc
Confidence 46899999996553222 2222 456677776 455554444444432 25778888876311 22223
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
--++++-++ .+++.++...+++.+.+...||+.+++..
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 346666666 57888888999999999888998877654
No 26
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.29 E-value=0.76 Score=40.31 Aligned_cols=104 Identities=10% Similarity=0.080 Sum_probs=69.4
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...|+-+|||.=.-...+ ..| +.+++=+|.+++++.-++.+...+. +.+++++..|+....+ . +
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~---------~-~ 231 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWASVLEVAKENARIQGV--ASRYHTIAGSAFEVDY---------G-N 231 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHHTC--GGGEEEEESCTTTSCC---------C-S
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCC--CcceEEEecccccCCC---------C-C
Confidence 3468999999976655544 234 4677777777777665555555432 2368899998863221 1 1
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcE-EEEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FLGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~-l~~d~ 170 (260)
.--++++-.+ .|++.++...+++.+.+...||+. ++.|.
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 1345666556 578888889999999998888885 45664
No 27
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=92.87 E-value=0.27 Score=43.11 Aligned_cols=134 Identities=11% Similarity=0.030 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCC----CCCCceeE
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGA----KIPRSCLF 109 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~----~~p~~~~~ 109 (260)
.++...++.++............|+-+|||.=.-...+.......++=+|. +++++.-++.+..... ....+.++
T Consensus 15 ~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 94 (313)
T 3bgv_A 15 WMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF 94 (313)
T ss_dssp HHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE
T ss_pred HHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE
Confidence 345556666555443211133579999998544333331112456676776 4444443344433210 01126788
Q ss_pred EeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCC--CHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 110 LHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM--TLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 110 v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl--~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
+..|+....+.+.+.. ..+.--++++-.+ .|+ +.+....+|+.+.+...||+.+++..+
T Consensus 95 ~~~D~~~~~~~~~~~~---~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 95 ITADSSKELLIDKFRD---PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp EECCTTTSCSTTTCSS---TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEecccccchhhhccc---CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 8888864322212210 0112345555555 576 567788999999998889998887754
No 28
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=92.65 E-value=1.2 Score=39.74 Aligned_cols=103 Identities=7% Similarity=0.013 Sum_probs=71.1
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.++..+. +.+++++..|+.... +. +
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~-~ 256 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNLPGAIDLVNENAAEKGV--ADRMRGIAVDIYKES---------YP-E 256 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTC--TTTEEEEECCTTTSC---------CC-C
T ss_pred CCCEEEEECCcccHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCC--CCCEEEEeCccccCC---------CC-C
Confidence 4568999999976655444 244 4667777779888877766665432 336889999886321 11 1
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l-~~d~ 170 (260)
. -++++-.+ .+++.+....+|+.+.+...||+.+ +.|.
T Consensus 257 ~-D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 257 A-DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp C-SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred C-CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 2 44555555 5788888899999999988888876 5663
No 29
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=92.60 E-value=0.46 Score=42.10 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCC--CCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCC---CCcee
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDG--MDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI---PRSCL 108 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaG--lDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~---p~~~~ 108 (260)
.+++.+|..++.......+....|+-|||| .|+..+.-. ....++=||. +++++.-++...+.+... .-+..
T Consensus 29 ~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~ 106 (302)
T 2vdw_A 29 YVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFD 106 (302)
T ss_dssp HHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEE
T ss_pred HHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccc
Confidence 345555554443321111223579999999 566654322 2356788887 455555444444432110 00245
Q ss_pred EEeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 109 FLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 109 ~v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
++..|+..+.+...|... +..+.=-++++..+ .|+ ..+++..+|+.+.++..||+.+++..+
T Consensus 107 f~~~d~~~d~~~~~l~~~-~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 107 YIQETIRSDTFVSSVREV-FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp EEECCTTSSSHHHHHHTT-CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhhcccchhhhhhhcc-ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 777777644555556431 11111124444444 574 545678999999999999999887765
No 30
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=92.42 E-value=0.41 Score=41.09 Aligned_cols=117 Identities=11% Similarity=0.025 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCC
Q 024907 38 TKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES 116 (260)
Q Consensus 38 tr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~ 116 (260)
.+.++.++... .. .....|+-+|||.=.-...+....+.+++-||. |+.++.-++.+...+. ..+++++..|+.
T Consensus 50 ~~~~~~~~~~~-~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~- 124 (287)
T 1kpg_A 50 IAKIDLALGKL-GL-QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN--LRSKRVLLAGWE- 124 (287)
T ss_dssp HHHHHHHHTTT-TC-CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC--CSCEEEEESCGG-
T ss_pred HHHHHHHHHHc-CC-CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--CCCeEEEECChh-
Confidence 34555555443 21 223589999999865444442001235666666 4555554555554432 236778877764
Q ss_pred chHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 117 SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 117 ~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
++. ..|| .++..+.+.+++.+....+++.+.+...||+.+++.
T Consensus 125 -~~~-----~~fD----~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 125 -QFD-----EPVD----RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp -GCC-----CCCS----EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred -hCC-----CCee----EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 221 2343 444444445787666788899999988898887754
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=92.13 E-value=0.54 Score=38.09 Aligned_cols=97 Identities=11% Similarity=-0.025 Sum_probs=61.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++-+|. |++++.-++ .+ ..+.+++..|+.. + + ..+.-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~---~~~~~~~~~d~~~--~---~-----~~~~~ 108 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HG---LDNVEFRQQDLFD--W---T-----PDRQW 108 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GC---CTTEEEEECCTTS--C---C-----CSSCE
T ss_pred CCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cC---CCCeEEEeccccc--C---C-----CCCce
Confidence 358999999976544444221 346666666 444443222 21 1368888888762 2 1 22333
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-++++-.+ .+++.+....+++.+.+...||+.+++.
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45666566 5788887889999999988888876644
No 32
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.82 E-value=0.69 Score=40.14 Aligned_cols=118 Identities=8% Similarity=0.012 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCC
Q 024907 37 TTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLE 115 (260)
Q Consensus 37 Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~ 115 (260)
+.+.++.++...-- .....|+-+|||.=.-...+....+.+++=||. |+.++.-++.++..+. +.+++++..|+.
T Consensus 57 ~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~ 132 (302)
T 3hem_A 57 QYAKRKLALDKLNL--EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHHTTCC--CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGG
T ss_pred HHHHHHHHHHHcCC--CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHH
Confidence 34456666655421 233589999999755444442110255666666 5566655555665442 236788888774
Q ss_pred CchHHHHHHhcCCCCCCCeEEEEccCCCC-------CHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 116 SSNIQQALRAKGFNGNRPSVWAIQGLPVM-------TLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 116 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl-------~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
++ ...|| .++..+.+.++ ..+....+++.+.++..||+.+++.
T Consensus 133 --~~-----~~~fD----~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 133 --EF-----DEPVD----RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp --GC-----CCCCS----EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred --Hc-----CCCcc----EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 22 22233 45555444577 4467788999999998999887654
No 33
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=91.76 E-value=0.34 Score=40.54 Aligned_cols=127 Identities=11% Similarity=0.009 Sum_probs=71.4
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChH-HHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P-~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++-||.- +.++.-+ + +.+++..|+. ++... +..+.-
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~----~-------~~~~~~~d~~--~~~~~-----~~~~~f 102 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCE----G-------KFNVVKSDAI--EYLKS-----LPDKYL 102 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHH----T-------TSEEECSCHH--HHHHT-----SCTTCB
T ss_pred CCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHH----h-------hcceeeccHH--HHhhh-----cCCCCe
Confidence 357999999976655555222 3456777763 3333211 1 2445554432 22222 222222
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChh--hh---hhhc---CCCcchhHHHHHHHHhCCcee
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW--LA---ETEF---GNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~--~~---~~~~---~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
-++++-++ .+++.+....+++.+.+...||+.+++..+.. .. .... ........-+.+++..+||.+
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 35555555 57888788899999999888998877764321 11 1111 111122233567899999996
No 34
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=91.75 E-value=0.39 Score=39.73 Aligned_cols=98 Identities=10% Similarity=0.156 Sum_probs=64.5
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..| +.+++=||. |++++.-++.+... + +.+++..|+.... +. +
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~-~~~~~~~d~~~~~---------~~-~ 108 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGN----L-KVKYIEADYSKYD---------FE-E 108 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSC----T-TEEEEESCTTTCC---------CC-S
T ss_pred CCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccC----C-CEEEEeCchhccC---------CC-C
Confidence 468999999976654444 233 567777777 56665544444432 2 6888888876321 11 2
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
.--++++-.+ .+++..+...+++.+.+...||+.+++
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3345555566 578877777899999998888887664
No 35
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=91.73 E-value=1.3 Score=36.86 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=62.5
Q ss_pred cceEEEeCCCCCCcccccC-CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHh-cCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-KGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~-~Gfd~~~ 132 (260)
..+|+-+|||.=.-...+. ....+.-+|++ |.+++.-++.+. ..+++++..|+........+.. ..|
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s-~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~---- 125 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFPRVIGLDVS-KSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGD---- 125 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSSCEEEEESC-HHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCS----
T ss_pred CCeEEEEcCCCCHHHHHHHHhCCCEEEEECC-HHHHHHHHHhCc------ccCceEEECcccccccccccccccCc----
Confidence 3579999999544333331 11134444554 344443333331 1278899999875333333321 123
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcE-EEEeC
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~-l~~d~ 170 (260)
.++++-++ .++++++...+++.+.+...||+. ++.+.
T Consensus 126 -d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 126 -ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp -CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred -cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 36666666 578888888999999998888886 55665
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=91.54 E-value=2 Score=36.70 Aligned_cols=115 Identities=10% Similarity=0.043 Sum_probs=68.9
Q ss_pred HHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchH
Q 024907 41 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNI 119 (260)
Q Consensus 41 iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw 119 (260)
++.++..... ....|+-+|||.=.-...+... +..++=||. |++++.-++.+...+. +.+++++..|+.. +
T Consensus 58 l~~~l~~~~~---~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~--~ 129 (285)
T 4htf_A 58 LDRVLAEMGP---QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGV--SDNMQFIHCAAQD--V 129 (285)
T ss_dssp HHHHHHHTCS---SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CC--GGGEEEEESCGGG--T
T ss_pred HHHHHHhcCC---CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC--CcceEEEEcCHHH--h
Confidence 4455544322 2358999999976655555222 456677776 5666655555555432 2368888888752 2
Q ss_pred HHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 120 QQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 120 ~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.. +..+.--++++-++ .+++. ...+++.+.++..||+.+++..+
T Consensus 130 ~~------~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 130 AS------HLETPVDLILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GG------GCSSCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hh------hcCCCceEEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEe
Confidence 11 11233446666666 46643 25688889988889988876643
No 37
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=91.35 E-value=0.68 Score=39.13 Aligned_cols=108 Identities=9% Similarity=0.032 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCch
Q 024907 40 FIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN 118 (260)
Q Consensus 40 ~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~d 118 (260)
.+-+.+.+.+. +...|+-+|||.=.-...+... +..++=||. |++++.-++.+. ++.++..|+....
T Consensus 39 ~~~~~l~~~~~---~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 39 DLAALVRRHSP---KAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP--------DAVLHHGDMRDFS 106 (263)
T ss_dssp HHHHHHHHHCT---TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTCC
T ss_pred HHHHHHHhhCC---CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC--------CCEEEECChHHCC
Confidence 34444444432 3357999999987766555332 345677776 555554333321 5778888876321
Q ss_pred HHHHHHhcCCCCCCCeEEEEcc-C-CCCC-HHHHHHHHHHHHhccCCCcEEEEe
Q 024907 119 IQQALRAKGFNGNRPSVWAIQG-L-PVMT-LASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 119 w~~~L~~~Gfd~~~Ptl~i~EG-v-~Yl~-~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+ . +.--++++-+ + .|++ +++...+|+.+.+...||+.++++
T Consensus 107 ~-----~-----~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L-----G-----RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C-----S-----CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-----c-----CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1 2223555554 6 5774 577889999999998899998886
No 38
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.35 E-value=0.63 Score=40.67 Aligned_cols=116 Identities=10% Similarity=0.050 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
+.++..+... .. .....|+-+|||.=.-...+....+.+++-||. |+.++.-++.+...+. +.++.++..|+.
T Consensus 77 ~~~~~~~~~~-~~-~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-- 150 (318)
T 2fk8_A 77 AKVDLNLDKL-DL-KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT--NRSRQVLLQGWE-- 150 (318)
T ss_dssp HHHHHHHTTS-CC-CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCGG--
T ss_pred HHHHHHHHhc-CC-CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECChH--
Confidence 4455554433 21 223579999999754333332110346677776 5555555555555432 235778887764
Q ss_pred hHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 118 NIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
++. ..|| .++..+.+.+++.+....+++.+.+...||+.+++.
T Consensus 151 ~~~-----~~fD----~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 151 DFA-----EPVD----RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp GCC-----CCCS----EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred HCC-----CCcC----EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 2343 444444445787777788999999988898887754
No 39
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=91.22 E-value=1 Score=40.33 Aligned_cols=123 Identities=8% Similarity=0.028 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccC
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 114 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~ 114 (260)
..|+..+-+.+.+.+...+ ...|+-+|||.=.-...+...+..+++=||..++++.-++.++..+. ..+.+++..|+
T Consensus 46 ~~r~~~~~~~i~~~~~~~~-~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~--~~~i~~~~~d~ 122 (340)
T 2fyt_A 46 KIRTESYRDFIYQNPHIFK-DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKL--EDTITLIKGKI 122 (340)
T ss_dssp HHHHHHHHHHHHHCGGGTT-TCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTC--TTTEEEEESCT
T ss_pred HHHHHHHHHHHHhhhhhcC-CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCC--CCcEEEEEeeH
Confidence 3566666666666543223 35799999997554444421112345555554466655555555442 23688888887
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccCCC-C-CHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGLPV-M-TLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-l-~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
.. + .+..+.--+++++.+.| + .......++..+.+...||+.++.+
T Consensus 123 ~~--~-------~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 123 EE--V-------HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp TT--S-------CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred HH--h-------cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 62 2 12234456889998743 3 4556778898888888899888744
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=90.77 E-value=1.4 Score=36.84 Aligned_cols=130 Identities=9% Similarity=0.031 Sum_probs=74.7
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+. .+ .+++=||. |..++.-++.++..+. +.+++++..|+.. +. +..+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~--~~-------~~~~ 113 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDN--LP-------FQNE 113 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTS--CS-------SCTT
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhh--CC-------CCCC
Confidence 3589999999766555552 23 25666666 4555554455555442 2358888888852 21 2223
Q ss_pred CCeEEEEccCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCChhhh--------hh-hcCC-CcchhHHHHHHHHhCCcee
Q 024907 132 RPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLA--------ET-EFGN-KSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 132 ~Ptl~i~EGv~-Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~--------~~-~~~~-~~~~~~w~~~~~~~~Gw~~ 200 (260)
.--++++.+++ ++. ...+++.+.+...||+.+++..+.+.. .. .... ...+.....+++.++||.+
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTP 190 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEE
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeE
Confidence 34577777774 564 456888888888898887654322111 00 0000 0112222357889999996
No 41
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=90.61 E-value=2 Score=38.11 Aligned_cols=154 Identities=9% Similarity=0.021 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEE
Q 024907 33 HYCLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFL 110 (260)
Q Consensus 33 ~~~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v 110 (260)
+.-.|--.+|++-.......+....|+-||||+=+.+.-+ .+.+..+|+=+|. +..+++-++.+...+. +.++.
T Consensus 111 STreRLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~----~~~~~ 186 (281)
T 3lcv_B 111 STRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV----PHRTN 186 (281)
T ss_dssp HHHHHGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC----CEEEE
T ss_pred CHHHHhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CceEE
Confidence 3444555788776655543344678999999999987666 3434677777766 3555666666666541 35666
Q ss_pred eccCCCchHHHHHHhcCCCCCCCe-EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHH
Q 024907 111 HVPLESSNIQQALRAKGFNGNRPS-VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKW 188 (260)
Q Consensus 111 ~vd~~~~dw~~~L~~~Gfd~~~Pt-l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w 188 (260)
..|+-... +..+. ++++-=+ .+|..++-..+++.+..+-++|-.+.|+.-.-..+. .++......|
T Consensus 187 v~D~~~~~-----------p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs-~gm~~~Y~~~ 254 (281)
T 3lcv_B 187 VADLLEDR-----------LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRS-KGMFQNYSQS 254 (281)
T ss_dssp ECCTTTSC-----------CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC--------CHHHHHHHH
T ss_pred EeeecccC-----------CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCC-cchhhHHHHH
Confidence 66765321 12222 5544444 578777666777777777666666778862100000 1111123445
Q ss_pred HHHHHHhCCceeee
Q 024907 189 MDKLFMSNGFGVGM 202 (260)
Q Consensus 189 ~~~~~~~~Gw~~~~ 202 (260)
.++++.+.||.++.
T Consensus 255 ~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 255 FESQARERSCRIQR 268 (281)
T ss_dssp HHHHHHHHTCCEEE
T ss_pred HHHHHHhcCCceee
Confidence 56778899998753
No 42
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=90.51 E-value=0.82 Score=38.10 Aligned_cols=148 Identities=13% Similarity=0.081 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCC
Q 024907 37 TTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLE 115 (260)
Q Consensus 37 Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~ 115 (260)
+..++..++..... .....|+-+|||.=.-...+.......++=||. |.+++.-++.+... .+.+++..|+.
T Consensus 78 ~~~~~~~~l~~l~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~ 150 (254)
T 1xtp_A 78 DIEGSRNFIASLPG--HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASME 150 (254)
T ss_dssp HHHHHHHHHHTSTT--CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGG
T ss_pred HHHHHHHHHHhhcc--cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHH
Confidence 34455555554422 234689999999765444442111234555554 45555444443332 26777777765
Q ss_pred CchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh-hh----hhhhcCCCcchhHHH
Q 024907 116 SSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA-WL----AETEFGNKSTTEKWM 189 (260)
Q Consensus 116 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~-~~----~~~~~~~~~~~~~w~ 189 (260)
. + .+..+.--++++-.+ .+++.++...+|+.+.+...||+.+++..+. .. ..........+..-.
T Consensus 151 ~--~-------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T 1xtp_A 151 T--A-------TLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHY 221 (254)
T ss_dssp G--C-------CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHH
T ss_pred H--C-------CCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHH
Confidence 2 1 122233346666666 5888888899999999988898877654321 00 000000001122234
Q ss_pred HHHHHhCCcee
Q 024907 190 DKLFMSNGFGV 200 (260)
Q Consensus 190 ~~~~~~~Gw~~ 200 (260)
.++|..+||.+
T Consensus 222 ~~~l~~aGf~~ 232 (254)
T 1xtp_A 222 KRLFNESGVRV 232 (254)
T ss_dssp HHHHHHHTCCE
T ss_pred HHHHHHCCCEE
Confidence 57889999996
No 43
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=90.27 E-value=3.9 Score=36.79 Aligned_cols=95 Identities=7% Similarity=0.016 Sum_probs=66.2
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...||-+|||.=.-...+ ..| +++++-+|+|++++.-+ . ..+++++..|+.. .+ . .
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~-------~--~~~v~~~~~D~~~-~~---------p-~ 259 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDLPHVISEAP-------Q--FPGVTHVGGDMFK-EV---------P-S 259 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC-------C--CTTEEEEECCTTT-CC---------C-C
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecCHHHHHhhh-------h--cCCeEEEeCCcCC-CC---------C-C
Confidence 4578999999977655555 345 57788888898865311 1 1378999999863 22 1 1
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l-~~d~ 170 (260)
. -++++-.+ ..++.++...+|+.+.+...||+.+ +.|.
T Consensus 260 ~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 260 G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1 35555556 4688888899999999988888865 5664
No 44
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=90.14 E-value=0.44 Score=42.05 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=68.3
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
..|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. ..+++++..|+.. .+ . .+||
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~----~-~~~D---- 235 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDREGSLGVARDNLSSLLA--GERVSLVGGDMLQ-EV----P-SNGD---- 235 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEECTTCTHHHHHHTHHHHH--TTSEEEEESCTTT-CC----C-SSCS----
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCcHHHHHHHHHHHhhcCC--CCcEEEecCCCCC-CC----C-CCCC----
Confidence 68999999987655555 244 4567777778888766665554321 2368899988863 21 1 2343
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeC
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GEL 170 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~ 170 (260)
++++-.+ .+++.+....+++.+.+...||+.++ .|.
T Consensus 236 -~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 236 -IYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp -EEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -EEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 4445455 57888888899999999888888654 554
No 45
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=90.05 E-value=1.2 Score=36.20 Aligned_cols=112 Identities=4% Similarity=-0.049 Sum_probs=68.9
Q ss_pred HHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHH
Q 024907 42 DDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQ 120 (260)
Q Consensus 42 Dd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~ 120 (260)
...+...+.. .....|+-+|||.=.-...+... +..++=||. |++++.-++.+... .+.+++..|+....
T Consensus 40 ~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 40 TQLLRLSLSS-GAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHTTT-SSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC--
T ss_pred HHHHHHHccc-CCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC--
Confidence 3444444432 23468999999976655444221 345666666 45555544444432 26888888876321
Q ss_pred HHHHhcCCCCCCCeEEEEccC-CCCC-HHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 121 QALRAKGFNGNRPSVWAIQGL-PVMT-LASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 121 ~~L~~~Gfd~~~Ptl~i~EGv-~Yl~-~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.. +.--++++-++ .|++ ++....+++.+.++..||+.+++..
T Consensus 111 ---~~-----~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 ---TA-----ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---CS-----CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---CC-----CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 11 22246666666 5776 5778889999999888999888754
No 46
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.91 E-value=0.65 Score=37.45 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=74.9
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+... +..++-||. |++++.-++. . + +.+++..|+.. +. +..+.--
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---~----~-~~~~~~~d~~~--~~-------~~~~~fD 104 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQT---H----P-SVTFHHGTITD--LS-------DSPKRWA 104 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHH---C----T-TSEEECCCGGG--GG-------GSCCCEE
T ss_pred CeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHh---C----C-CCeEEeCcccc--cc-------cCCCCeE
Confidence 47999999976654444222 346677776 4444432322 1 1 57788777652 21 1222334
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh--hhhhhhcCC---CcchhHHHHHHHHhCCcee
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA--WLAETEFGN---KSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~--~~~~~~~~~---~~~~~~w~~~~~~~~Gw~~ 200 (260)
++++-++ .+++.++...+++.+.+...||+.+++..+. ......... ...+...+.++|..+||.+
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 176 (203)
T 3h2b_A 105 GLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQV 176 (203)
T ss_dssp EEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEE
T ss_pred EEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcE
Confidence 6666566 5788778889999999988898887765421 111100000 1122333568899999996
No 47
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=89.78 E-value=1.8 Score=35.10 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=61.7
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++=||. |++++.-++.+. .+.+++..|+...... ..||
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-----~~fD---- 108 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-----TSID---- 108 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-----SCCS----
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-----CCeE----
Confidence 357999999987655555322 456777777 445544333322 2577888887631110 2233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
++++-++ .+++..+...+|+.+.+...||+.+++.
T Consensus 109 -~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 109 -TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp -EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred -EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5555555 5788877777899999988888877654
No 48
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=89.77 E-value=1.4 Score=39.33 Aligned_cols=102 Identities=7% Similarity=-0.108 Sum_probs=70.8
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. +.+++++..|+.. .+. .+|
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~-----~~~---- 249 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAP-HLRGTLVELAGPAERARRRFADAGL--ADRVTVAEGDFFK-PLP-----VTA---- 249 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCS-----CCE----
T ss_pred CCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeCHHHHHHHHHHHHhcCC--CCceEEEeCCCCC-cCC-----CCC----
Confidence 468999999987655554 244 5778888888888876666665432 2378899998752 211 123
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeC
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GEL 170 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~ 170 (260)
-++++-.+ .+++.+....+++.+.+...||+.++ .|.
T Consensus 250 -D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 -DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 35666666 57888877889999998888888654 565
No 49
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.75 E-value=2.6 Score=33.03 Aligned_cols=121 Identities=6% Similarity=-0.096 Sum_probs=72.6
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++-+|. |++++.-++.+ .+.+++..|+.... +..+.-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---------~~~~~~ 108 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQ---------ISETDF 108 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSC---------CCCCCE
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCC---------CCCCce
Confidence 358999999965544444211 345666665 44444333222 14677777775311 222334
Q ss_pred eEEEEc-cC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCceee
Q 024907 134 SVWAIQ-GL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 201 (260)
Q Consensus 134 tl~i~E-Gv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~ 201 (260)
-++++- .+ .+++.+....+++.+.+...||+.+++..+... .....-..+.+..+||.+.
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------GWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------SCCHHHHHHHHHHHTEEEE
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------CcCHHHHHHHHHHcCCEEe
Confidence 577776 35 478888888999999998889988887653210 0111223467889999973
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=89.67 E-value=2.1 Score=37.33 Aligned_cols=100 Identities=4% Similarity=-0.094 Sum_probs=62.7
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+....+.+++=||. |+.++.-++.++..+. +.+++++..|+.... +..+.-
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~~~~f 186 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDTP---------FDKGAV 186 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCC---------CCTTCE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcCC---------CCCCCE
Confidence 4579999999866554442111355666776 5666655555555542 237889999886321 222333
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
-++++-++ .+++ ...+++.+.+...||+.+++
T Consensus 187 D~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 187 TASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEE
Confidence 45555555 5675 67788888888888887664
No 51
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=89.60 E-value=1 Score=40.03 Aligned_cols=103 Identities=8% Similarity=-0.040 Sum_probs=71.1
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..| +++++.+|.|++++.-++.+...+. +.+++++..|+.. .+. .+|
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~-----~~~---- 250 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAP-HVSATVLEMAGTVDTARSYLKDEGL--SDRVDVVEGDFFE-PLP-----RKA---- 250 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECTTHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCS-----SCE----
T ss_pred CcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecCHHHHHHHHHHHHhcCC--CCceEEEeCCCCC-CCC-----CCc----
Confidence 468999999987655555 244 5788888988888776666665432 2378899998752 211 122
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCC
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP 171 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d~~ 171 (260)
-++++-.+ .+++.++...+++.+.+...||+.++ .|..
T Consensus 251 -D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 -DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 35666666 47888877889999999888888655 5644
No 52
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.49 E-value=1.5 Score=34.74 Aligned_cols=99 Identities=7% Similarity=-0.113 Sum_probs=63.2
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++=+|. |.+++.-++.+...+. .+.+++..|+.... + .+.-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~---------~-~~~~ 98 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL---DNLHTRVVDLNNLT---------F-DRQY 98 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECCGGGCC---------C-CCCE
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC---CCcEEEEcchhhCC---------C-CCCc
Confidence 358999999965544444222 446666666 5555554444444431 25778887765211 2 2334
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL 167 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~ 167 (260)
-++++-++ .++++++...+++.+.+...||+.++
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 56777777 57888888999999999888888754
No 53
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=89.19 E-value=0.57 Score=40.61 Aligned_cols=107 Identities=11% Similarity=0.001 Sum_probs=64.7
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+. .+.+.+++=||. |.+++.-++.++.... ...+++++..|+..-.+.. ..++..+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~~~~~~~---~~~~~~~ 112 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD-TYKNVSFKISSSDDFKFLG---ADSVDKQ 112 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCCGGGC---TTTTTSS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC-CCCceEEEEcCHHhCCccc---cccccCC
Confidence 4689999999766566664 123567777777 5566555555554311 1237899999987422211 0011123
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
.--++++-.+ .++ +...+++.+.+...||+.+++
T Consensus 113 ~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 3345555555 466 456788888888888887764
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=89.17 E-value=5.4 Score=31.80 Aligned_cols=99 Identities=8% Similarity=-0.059 Sum_probs=62.4
Q ss_pred eEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCeE
Q 024907 57 QVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPSV 135 (260)
Q Consensus 57 QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Ptl 135 (260)
.|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+ . +..++..|+.... +..+.--+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~---------~~~~~fD~ 97 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKG---V-KITTVQSNLADFD---------IVADAWEG 97 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHT---C-CEEEECCBTTTBS---------CCTTTCSE
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcC---C-ceEEEEcChhhcC---------CCcCCccE
Confidence 8999999975444444322 456777776 455555445555432 1 5777777776321 11222234
Q ss_pred EEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 136 WAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 136 ~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
+++ ...+++.+....+++.+.+...||+.+++..
T Consensus 98 v~~-~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 98 IVS-IFCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp EEE-ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred EEE-EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 444 2346677888999999999988999877664
No 55
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=89.06 E-value=1.6 Score=36.46 Aligned_cols=136 Identities=11% Similarity=0.021 Sum_probs=78.4
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+....+.+++=||. |+.++.-++.+... .+++++..|+.... +..+.-
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~---------~~~~~f 121 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKE---------FPENNF 121 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCC---------CCTTCE
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCC---------CCCCcE
Confidence 3579999999655444442110356677776 44444333332221 36888888876311 222333
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC---h--hhh----hhh--cCCCcchhHHHHHHHHhCCcee-
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP---A--WLA----ETE--FGNKSTTEKWMDKLFMSNGFGV- 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~---~--~~~----~~~--~~~~~~~~~w~~~~~~~~Gw~~- 200 (260)
-++++-++ .++++++...+++.+.+...||+.+++..+ . ... ... ......+.....+++..+||.+
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 201 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNV 201 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEE
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEE
Confidence 46666666 578888889999999998888887665421 1 010 000 1122222333457889999985
Q ss_pred eeeC
Q 024907 201 GMVS 204 (260)
Q Consensus 201 ~~~~ 204 (260)
+...
T Consensus 202 ~~~~ 205 (266)
T 3ujc_A 202 VSKD 205 (266)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 56
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=89.04 E-value=0.65 Score=42.80 Aligned_cols=122 Identities=14% Similarity=0.118 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccC
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 114 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~ 114 (260)
.+||..+.+.|.+......| +.|+-+|||.=-.+.-....+..+||=||..++++.-+++++..+.. .+.+++..++
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~~~-k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~--~~i~~i~~~~ 141 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAALRG-KTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLE--DRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHHHHHTTHHHHTT-CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCT--TTEEEEESCT
T ss_pred HHHHHHHHHHHHhCHHhcCC-CEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCC--ceEEEEeeee
Confidence 68998888888654332234 46999999976544333222234677777766666656666665532 3688888887
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccC-CCC-CHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
..-++ |.+--++|+|.+ .+| .+..+..++....++..||+.++.+
T Consensus 142 ~~~~l----------pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 142 ETVEL----------PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCCC----------SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eeecC----------CccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 63111 234568999988 444 4557788888888888888888765
No 57
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=88.92 E-value=2.5 Score=35.20 Aligned_cols=99 Identities=16% Similarity=0.090 Sum_probs=60.3
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+.......++=+|. |++++.-++.+. ..++.++..|+.. +. +..+.-
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~--~~-------~~~~~f 109 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIED--IA-------IEPDAY 109 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGG--CC-------CCTTCE
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhh--CC-------CCCCCe
Confidence 4589999999865444442111126677776 555554444333 1368888888752 11 222233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
-++++-++ .+++ +...+++.+.+...||+.+++..
T Consensus 110 D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 110 NVVLSSLALHYIA--SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEe
Confidence 46666666 4663 35678888998888999888764
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=88.85 E-value=4.7 Score=32.61 Aligned_cols=118 Identities=13% Similarity=0.109 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccC-CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccC
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 114 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~ 114 (260)
.+...+-+.+.+.+. + ...|+-+|||.=.-...+. ....+.-+|++ |++++.-++.+...+ .+.+++..|+
T Consensus 23 ~~~~~~~~~l~~~~~--~-~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s-~~~~~~a~~~~~~~~----~~~~~~~~d~ 94 (227)
T 1ve3_A 23 SRIETLEPLLMKYMK--K-RGKVLDLACGVGGFSFLLEDYGFEVVGVDIS-EDMIRKAREYAKSRE----SNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHHHSCC--S-CCEEEEETCTTSHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTT----CCCEEEECCT
T ss_pred HHHHHHHHHHHHhcC--C-CCeEEEEeccCCHHHHHHHHcCCEEEEEECC-HHHHHHHHHHHHhcC----CCceEEECch
Confidence 344444455555543 2 4589999999765444442 11134445555 666665455554432 2678888887
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.... +..+.--++++-.+ .+....+...+++.+.+...||+.+++..
T Consensus 95 ~~~~---------~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 95 RKLS---------FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp TSCC---------SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCC---------CCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 6311 22223345665565 36666777889999999888888876654
No 59
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=88.84 E-value=1.6 Score=36.79 Aligned_cols=109 Identities=8% Similarity=-0.058 Sum_probs=62.3
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..|.+.+++-+|. |+.++.-++.++..+. ..+.+++..|.. ++...+...|+..+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAM--LALDNLLQGQESEG 146 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHSTTCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhccCCCC
Confidence 457999999754332222 2333445555555 4555555555555442 235777777653 34455654443222
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.--++++-+- .......++.+.++..||+.+++|-.
T Consensus 147 ~fD~I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CcCEEEECCc----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2234544432 33456678888888889999999854
No 60
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=88.61 E-value=3.3 Score=33.89 Aligned_cols=102 Identities=9% Similarity=0.052 Sum_probs=66.4
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+ .+.+++..|+.... +. +.-
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~-~~f 102 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNLN---------IN-RKF 102 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGCC---------CS-CCE
T ss_pred CCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccCC---------cc-CCc
Confidence 358999999976655555322 456777777 556555444554432 15677777764211 11 233
Q ss_pred eEEEEcc-C-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 134 SVWAIQG-L-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 134 tl~i~EG-v-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
-++++-+ + .|+ ++++...+++.+.+...||+.++++.+
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4666665 6 577 557889999999998889999888754
No 61
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=88.49 E-value=2.4 Score=35.19 Aligned_cols=134 Identities=13% Similarity=0.012 Sum_probs=75.5
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+.......++=||. |.+++.-++.+...+ ..+..++..|+.. +. +..+.-
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~--~~-------~~~~~f 147 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQD--FT-------PEPDSY 147 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGG--CC-------CCSSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhh--cC-------CCCCCE
Confidence 4689999999766555543221345666665 455554444444331 1256677777542 11 122233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCChhhhhhhcCC---CcchhHHHHHHHHhCCcee
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGN---KSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~~~~~~~~~~~---~~~~~~w~~~~~~~~Gw~~ 200 (260)
-++++-.+ .+++.+....+++.+.+...||+.+++ +............ ......-..++|..+||.+
T Consensus 148 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCE
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeE
Confidence 46666666 588887788899999998888887765 3211100000000 0012223457889999986
No 62
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.31 E-value=1.4 Score=39.86 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=66.5
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...||-+|||.=.-...+ ..| +++++-+|+|++++.-+ . ..+++++..|+.. .+ . +
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~-------~--~~~v~~~~~d~~~-~~---------p-~ 261 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDLPHVIQDAP-------A--FSGVEHLGGDMFD-GV---------P-K 261 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC-------C--CTTEEEEECCTTT-CC---------C-C
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEehHHHHHhhh-------h--cCCCEEEecCCCC-CC---------C-C
Confidence 4578999999977666555 345 57788888898875311 1 1378899998763 22 1 1
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l-~~d~ 170 (260)
. -++++-.+ .+++.++...+|+.+.+...||+.+ +.|.
T Consensus 262 ~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 262 G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1 45666666 4688888889999999988888865 4564
No 63
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=88.29 E-value=11 Score=38.75 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=85.4
Q ss_pred cceEEEeCCCCCCcccccCC--CCCcEEEEeCh-HHHHHHHHHHHhhcCC---CCCCceeEEeccCCCchHHHHHHhcCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNW--PTSTIIFDISP-ERIFKISAEKLEGVGA---KIPRSCLFLHVPLESSNIQQALRAKGF 128 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~--~~~~~~~EvD~-P~v~~~K~~~l~~~~~---~~p~~~~~v~vd~~~~dw~~~L~~~Gf 128 (260)
...|+-+|||.=.-...|.. +....++=||. +.+++.-++.+..... ....+.+++..|+..-.+ ....|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~----~d~sF 797 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS----RLHDV 797 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT----TSCSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc----ccCCe
Confidence 35799999998766665532 12356777776 4555554444443211 011368888888863221 12334
Q ss_pred CCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChh----h-hhh-------------hcCCC--------
Q 024907 129 NGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAW----L-AET-------------EFGNK-------- 182 (260)
Q Consensus 129 d~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~----~-~~~-------------~~~~~-------- 182 (260)
| .++..+.+.+++......+++.+.+...|| .+++..++. . ... ...++
T Consensus 798 D----lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEW 872 (950)
T 3htx_A 798 D----IGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEW 872 (950)
T ss_dssp C----EEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCB
T ss_pred e----EEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceee
Confidence 4 455555546899888888999999998999 766654321 0 000 00111
Q ss_pred --cchhHHHHHHHHhCCceeeeeCHHH
Q 024907 183 --STTEKWMDKLFMSNGFGVGMVSYKE 207 (260)
Q Consensus 183 --~~~~~w~~~~~~~~Gw~~~~~~~~~ 207 (260)
..-..|...+...+||.++....++
T Consensus 873 TReEFr~Wae~LAer~GYsVefvGVGD 899 (950)
T 3htx_A 873 TREQFNQWASKLGKRHNYSVEFSGVGG 899 (950)
T ss_dssp CHHHHHHHHHHHHHHTTEEEEEEEESS
T ss_pred cHHHHHHHHHHHHHhcCcEEEEEccCC
Confidence 1124566777888999988765554
No 64
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=88.21 E-value=1.7 Score=38.68 Aligned_cols=122 Identities=11% Similarity=0.106 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccC-CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEecc
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVP 113 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd 113 (260)
..|+..+.+.+.+.+...++ ..|+-+|||.=.-...+. .+ ..+++=||..++++.-++.++..+. +.+.+++..|
T Consensus 20 ~~r~~~y~~ai~~~~~~~~~-~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s~~~~~a~~~~~~~~~--~~~i~~~~~d 95 (328)
T 1g6q_1 20 TVRTLSYRNAIIQNKDLFKD-KIVLDVGCGTGILSMFAAKHG-AKHVIGVDMSSIIEMAKELVELNGF--SDKITLLRGK 95 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CEEEEETCTTSHHHHHHHHTC-CSEEEEEESSTHHHHHHHHHHHTTC--TTTEEEEESC
T ss_pred HHHHHHHHHHHHhhHhhcCC-CEEEEecCccHHHHHHHHHCC-CCEEEEEChHHHHHHHHHHHHHcCC--CCCEEEEECc
Confidence 35665555555444332133 579999999755444442 22 2244444444466555555555432 2368888888
Q ss_pred CCCchHHHHHHhcCCCCCCCeEEEEccCC-CC-CHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 114 LESSNIQQALRAKGFNGNRPSVWAIQGLP-VM-TLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 114 ~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-Yl-~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+..-. +....--+++++.+. .+ ..+....++..+.++..||+.++.+
T Consensus 96 ~~~~~---------~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 96 LEDVH---------LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp TTTSC---------CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred hhhcc---------CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 76311 222344688888773 33 4455677888888887888888754
No 65
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=88.00 E-value=3.4 Score=32.89 Aligned_cols=104 Identities=12% Similarity=0.091 Sum_probs=61.9
Q ss_pred ceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
..|+-||||.=.-...+ ..+ ..+++=||. |++++.-++.++..+. .+++++..|+. ++...+.. ...
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~--~~~~~~~~-----~~f 114 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAVA--AVVAAGTT-----SPV 114 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCHH--HHHHHCCS-----SCC
T ss_pred CEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccHH--HHHhhccC-----CCc
Confidence 57999999976654433 222 234455554 4455444444454432 26778877764 33332212 233
Q ss_pred eEEEEccCCCC-CHHHHHHHHHHHHh--ccCCCcEEEEeCC
Q 024907 134 SVWAIQGLPVM-TLASFEDVLLLVGS--LAMNKCLFLGELP 171 (260)
Q Consensus 134 tl~i~EGv~Yl-~~~~~~~ll~~i~~--~~a~gs~l~~d~~ 171 (260)
-++++-.. |. ..+....+++.+.+ +..||+.++++..
T Consensus 115 D~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 115 DLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp SEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred cEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 36666444 53 35778889999988 7789999988754
No 66
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=87.50 E-value=1.5 Score=39.45 Aligned_cols=123 Identities=8% Similarity=0.024 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccC
Q 024907 35 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 114 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~ 114 (260)
..|+..+.+.+.+.....++ ..|+-+|||.=.-...+...+..+++=||..++++.-++.++..+. +.+++++..|+
T Consensus 48 ~~r~~~~~~~i~~~~~~~~~-~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~--~~~v~~~~~d~ 124 (349)
T 3q7e_A 48 EVRTLTYRNSMFHNRHLFKD-KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKL--DHVVTIIKGKV 124 (349)
T ss_dssp HHHHHHHHHHHHTCHHHHTT-CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC--TTTEEEEESCT
T ss_pred HHHHHHHHHHHHhccccCCC-CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCC--CCcEEEEECcH
Confidence 45666666666543221133 5799999998655444421122355555554576665666665542 23588999988
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccC-CC-CCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGL-PV-MTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Y-l~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
..-. +....--+++++.+ .+ ..++....++..+.++..||+.++++
T Consensus 125 ~~~~---------~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 125 EEVE---------LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TTCC---------CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHcc---------CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 6321 22234468888887 33 34566788888998888899888755
No 67
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=87.27 E-value=3 Score=35.12 Aligned_cols=134 Identities=9% Similarity=-0.003 Sum_probs=79.3
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+....+..++=||. |.+++.-++.++..+. +.+++++..|+.. +. +..+.-
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~--~~-------~~~~~f 115 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDD--LP-------FRNEEL 115 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTS--CC-------CCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhh--CC-------CCCCCE
Confidence 4589999999766555552223456777776 5556555555555442 2368899988863 21 223344
Q ss_pred eEEEEccCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCChhh--------hhhh-cCC-CcchhHHHHHHHHhCCcee-e
Q 024907 134 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--------AETE-FGN-KSTTEKWMDKLFMSNGFGV-G 201 (260)
Q Consensus 134 tl~i~EGv~-Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~--------~~~~-~~~-~~~~~~w~~~~~~~~Gw~~-~ 201 (260)
-++++-+++ ++. ...+++.+.++..||+.+++..+.+. .... ..+ ...+.....+++.++||.+ +
T Consensus 116 D~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 116 DLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp EEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred EEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 577777774 563 45678889988889888765432111 0000 001 1112222457889999995 4
Q ss_pred e
Q 024907 202 M 202 (260)
Q Consensus 202 ~ 202 (260)
+
T Consensus 193 ~ 193 (267)
T 3kkz_A 193 T 193 (267)
T ss_dssp E
T ss_pred E
Confidence 4
No 68
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=87.20 E-value=3.1 Score=34.96 Aligned_cols=116 Identities=10% Similarity=-0.004 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
+.++.++... .. .....|+-+|||.=.-...+....+.+++-+|. |+.++.-++.++..+. +.+.+++..|+...
T Consensus 48 ~~~~~l~~~~-~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 48 RLTDEMIALL-DV-RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHS-CC-CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC
T ss_pred HHHHHHHHhc-CC-CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccC
Confidence 3445555443 21 233589999999765544442111356666666 4555554455554432 23688888887631
Q ss_pred hHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 118 NIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
. +..+.--++++-++ .+++.. ..+|+.+.+...||+.+++.
T Consensus 124 ~---------~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 124 P---------FEDASFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp C---------SCTTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEE
T ss_pred C---------CCCCCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEE
Confidence 1 22233346666666 456432 67888899888888876643
No 69
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=87.02 E-value=6.6 Score=31.93 Aligned_cols=105 Identities=9% Similarity=0.030 Sum_probs=64.2
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhc---CC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAK---GF 128 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~---Gf 128 (260)
...|+-+|||.=.-...+ ..|.+.+++-||. |+.++.-++.++..+. +.+++++..|+. +....+... .|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~~~~f 134 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLAL--DSLQQIENEKYEPF 134 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHTTCCCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhcCCCCc
Confidence 357999999865443333 2333567777776 6666665556665542 235788887764 333444432 24
Q ss_pred CCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCCh
Q 024907 129 NGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 172 (260)
Q Consensus 129 d~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~ 172 (260)
| ++++-+. ......+++.+.++..||+.++++-+.
T Consensus 135 D-----~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 135 D-----FIFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp S-----EEEECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred C-----EEEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 4 4444443 334467788888888899999988543
No 70
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=86.98 E-value=2.9 Score=34.28 Aligned_cols=108 Identities=10% Similarity=-0.048 Sum_probs=60.4
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..+.+.+++=+|. |+.++.-++.++..+. ..+++++..|+. +....+...+ ...
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~--~~~~~~~~~~-~~~ 144 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPAL--ETLDELLAAG-EAG 144 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHTT-CTT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHH--HHHHHHHhcC-CCC
Confidence 458999999844333333 2333455666665 5555555555555442 236778877653 3444454322 112
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.--++++-+. ......+++.+.++..||+.++++-.
T Consensus 145 ~~D~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 145 TFDVAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp CEEEEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CccEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2235554433 23345677777777778999888744
No 71
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=86.90 E-value=2.2 Score=38.23 Aligned_cols=121 Identities=7% Similarity=0.040 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCC
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 115 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~ 115 (260)
.|+..+.+.+.+.+...+ ...|+-+|||.=.-...+......+++=||..++++.-++.++..+. +.+.+++..|+.
T Consensus 33 ~r~~~y~~~i~~~l~~~~-~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l--~~~v~~~~~d~~ 109 (348)
T 2y1w_A 33 VRTGTYQRAILQNHTDFK-DKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL--TDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHHHHTGGGTT-TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HHHHHHHHHHHhccccCC-cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcchh
Confidence 555555555555543223 35799999997665444421122345555554455554555555432 236888888876
Q ss_pred CchHHHHHHhcCCCCCCCeEEEEccCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 116 SSNIQQALRAKGFNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 116 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
.-. + +..--+++++++. .+..+.....+..+.++..||+.++..
T Consensus 110 ~~~---------~-~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 110 EVS---------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TCC---------C-SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hCC---------C-CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 311 1 1344688999874 455555556666777777888888754
No 72
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=86.18 E-value=6.7 Score=31.90 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=54.5
Q ss_pred ceEEEeCCCCCCcccccCCC-CCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWP-TSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~-~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+... ..+.-+|++. ++++.-++.+. .+++++..|+.. + . ..+.--
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-~~~~~a~~~~~-------~~v~~~~~d~~~--~---~-----~~~~fD 105 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCVEASE-EAISHAQGRLK-------DGITYIHSRFED--A---Q-----LPRRYD 105 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEEESCH-HHHHHHHHHSC-------SCEEEEESCGGG--C---C-----CSSCEE
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEEeCCH-HHHHHHHHhhh-------CCeEEEEccHHH--c---C-----cCCccc
Confidence 46999999975544444221 1344444443 34333222221 157778777652 2 1 112234
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHH-hccCCCcEEEEeCC
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVG-SLAMNKCLFLGELP 171 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~-~~~a~gs~l~~d~~ 171 (260)
++++-++ .+++.. ..+|+.+. +...||+.+++..+
T Consensus 106 ~v~~~~~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 106 NIVLTHVLEHIDDP--VALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EEEEESCGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEhhHHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcC
Confidence 6666666 466432 57888999 88889888776543
No 73
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=85.55 E-value=8.2 Score=29.72 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=68.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+..+ +.+++=+|. |++++.-++.+...+. .+.+++..|+. +.+... ..
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~-----~~~~~~-----~~ 101 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKR-CKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAE-----DVLDKL-----EF 101 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTT-SSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHH-----HHGGGC-----CC
T ss_pred CCEEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCcc-----ccccCC-----CC
Confidence 358999999986655555333 455666665 4555554555554432 25667666653 233322 23
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCceeeee
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGMV 203 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~~~ 203 (260)
-++++-++ .....+++.+.++ ||+.+++..+..- ......+.+..+||.++..
T Consensus 102 D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 102 NKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVLE----------NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp SEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCHH----------HHHHHHHHHHHTTCEEEEE
T ss_pred cEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEecccc----------cHHHHHHHHHHcCCeEEEE
Confidence 35555544 4456788888887 7777766543211 0111346789999987653
No 74
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=85.17 E-value=4.6 Score=33.10 Aligned_cols=128 Identities=12% Similarity=0.003 Sum_probs=71.2
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++-||. |.+++.-++.. ...+++++..|+.... +....-
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~---------~~~~~f 117 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLP---------FENEQF 117 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCS---------SCTTCE
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCC---------CCCCCc
Confidence 358999999986655555322 446666666 34443322211 1136888888876311 222333
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChh--h--hhh----h-c--CCCcchhHHHHHHHHhCCcee
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW--L--AET----E-F--GNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~--~--~~~----~-~--~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
-++++-++ .+++ +...+++.+.+...||+.+++..+.. . ... . . .....+...+.+++..+||.+
T Consensus 118 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 118 EAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp EEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred cEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 46666666 4563 23567888888888888776543211 1 000 0 0 011122333568899999996
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=84.97 E-value=4.9 Score=32.86 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=63.5
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+... .+++=+|. |++++.-++.+...+ .+.+++..|+.... +. +.--
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~-~~fD 98 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELE---------LP-EPVD 98 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCC---------CS-SCEE
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcC---------CC-CCcC
Confidence 57999999986544444322 45666666 555554444444432 25777777764211 11 2234
Q ss_pred EEEEcc-C-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 135 VWAIQG-L-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 135 l~i~EG-v-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
++++-+ + .|+ +.+....+++.+.++..||+.++++.+
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 566554 5 576 667888999999998889999888754
No 76
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=84.97 E-value=7.5 Score=31.53 Aligned_cols=134 Identities=8% Similarity=0.004 Sum_probs=75.1
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeChH-HHHHHHHHHHhhcC------C---CCCCceeEEeccCCCchHHHHHHh
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVG------A---KIPRSCLFLHVPLESSNIQQALRA 125 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P-~v~~~K~~~l~~~~------~---~~p~~~~~v~vd~~~~dw~~~L~~ 125 (260)
..|+-+|||-=.-...|... +..++=||.- ++++.-++...... . ....+.+++..|+..-...+ .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~-~-- 99 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD-I-- 99 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH-H--
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc-C--
Confidence 57999999965544445322 4578888874 45544333322100 0 00136888999986322211 0
Q ss_pred cCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcE-EE--EeCChhhhhhhcCCCcchhHHHHHHHHhCCceee
Q 024907 126 KGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FL--GELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 201 (260)
Q Consensus 126 ~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~-l~--~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~ 201 (260)
..|| ++++-++ .+++.+....+++.+.+...||+. ++ +++.... .....+. .+...+.++|.. ||++.
T Consensus 100 ~~fD-----~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~-~~~~~~~-~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 100 GHCA-----AFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL-LEGPPFS-VPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp HSEE-----EEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS-SSSCCCC-CCHHHHHHTSCS-SEEEE
T ss_pred CCEE-----EEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc-cCCCCCC-CCHHHHHHHhcC-CcEEE
Confidence 2344 5556666 578888778899999998889886 22 3333110 0000111 233445677777 99863
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=84.81 E-value=1.6 Score=37.37 Aligned_cols=124 Identities=10% Similarity=0.036 Sum_probs=70.4
Q ss_pred HHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCC-CCceeEEeccCCCc
Q 024907 40 FIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI-PRSCLFLHVPLESS 117 (260)
Q Consensus 40 ~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~-p~~~~~v~vd~~~~ 117 (260)
.+.+++.+.+.. .+...|+-+|||.=.-...+... +..++=||. |++++.-++......... ..+..++..|+.
T Consensus 44 ~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-- 119 (293)
T 3thr_A 44 EYKAWLLGLLRQ-HGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-- 119 (293)
T ss_dssp HHHHHHHHHHHH-TTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG--
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh--
Confidence 334445444442 23457999999986655555222 346676776 444444333332221110 013445555543
Q ss_pred hHHHHHHhcCCCCCCCeEEEEcc-C-CCCCH-----HHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 118 NIQQALRAKGFNGNRPSVWAIQG-L-PVMTL-----ASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i~EG-v-~Yl~~-----~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
++.+.+ +..+.--++++-| + .+++. ++...+++.+.++..||+.+++..+
T Consensus 120 ~~~~~~----~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 120 TLDKDV----PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GHHHHS----CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCcccc----ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 333332 3334456777763 4 46665 7788999999999889999887754
No 78
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=84.75 E-value=9.7 Score=30.60 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=74.0
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+. .+....++=||. |++++.-++.+...+. .+..++..|+.... +..+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~---------~~~~ 105 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIP---------LPDN 105 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCS---------SCSS
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCC---------CCCC
Confidence 3589999999866554442 222456777776 5666655555555432 26888888876311 2223
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCChhhhhhhcC-CCcchhHHHHHHHHhCCcee
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFG-NKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~~~~~~~~~~-~~~~~~~w~~~~~~~~Gw~~ 200 (260)
.--++++-++ .+++ +...+++.+.+...||+.+++ +........... .......-..+++..+||++
T Consensus 106 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 106 TVDFIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp CEEEEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred CeeEEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEE
Confidence 3345665555 4564 236678888888788887665 322100000000 00111222457889999985
No 79
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=83.72 E-value=2.5 Score=35.87 Aligned_cols=109 Identities=8% Similarity=-0.004 Sum_probs=59.5
Q ss_pred cceEEEeCCCC--CCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGM--DTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGl--DTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||. -+..+--..|.+.+++-||. |+.++.-++.++..+. ..+++++..|.. ++...+...|+...
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPAL--PVLDEMIKDEKNHG 155 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHSGGGTT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHH--HHHHHHHhccCCCC
Confidence 46899999974 33332222333455666665 4555555555555432 236777777653 34444532221111
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.--++++-+. .......++.+.++..||+.+++|-.
T Consensus 156 ~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 156 SYDFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp CBSEEEECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CEEEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1124444432 22345677777788889999998854
No 80
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=83.19 E-value=5.1 Score=34.18 Aligned_cols=179 Identities=11% Similarity=-0.110 Sum_probs=91.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+....+.+++=||. |.+++.-++.+...+. +.+++++..|+.... +..+.-
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~~f 151 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEIP---------CEDNSY 151 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSCS---------SCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccCC---------CCCCCE
Confidence 3579999999654444442100345666666 4555544445554432 236888888876311 222233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh---h-----hhhhh--cCCC-cchhHHHHHHHHhCCcee-
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA---W-----LAETE--FGNK-STTEKWMDKLFMSNGFGV- 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~---~-----~~~~~--~~~~-~~~~~w~~~~~~~~Gw~~- 200 (260)
-++++-++ .+++. ...+|+.+.+...||+.+++..+. . ..... .... ..+..-..+++..+||.+
T Consensus 152 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 229 (297)
T 2o57_A 152 DFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTL 229 (297)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEE
T ss_pred eEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEE
Confidence 45666665 45644 467888888888888876654211 0 00000 0111 112222457889999996
Q ss_pred eeeCHHH-HHHHcCCCCCCccchhHHHHHHHhcCChHHHHHHHHHHHHhh
Q 024907 201 GMVSYKE-VASSLGKELAPGYYKNILFLAEQLRFSDDQMDTWRRELQRVE 249 (260)
Q Consensus 201 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (260)
++.+..+ +...|...+. .+... .......++....+.+...+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 276 (297)
T 2o57_A 230 RTFSRPDSLVHHYSKVKA--ELIKR-SSEIASFCSPEFQANMKRGLEHWI 276 (297)
T ss_dssp EEEECHHHHHHHHHHHHH--HHHHT-HHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred EEEECchhhHHHHHHHHH--HHHHh-HHHHhccCCHHHHHHHHHHHHHHH
Confidence 5544332 2222221100 00000 000123467777777777766443
No 81
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=82.77 E-value=3.6 Score=34.42 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=58.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... ...++-+|. |++++.-++.+...+. .++.++..|+.. +. |..+.-
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~--l~-------~~~~~f 104 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGH---QQVEYVQGDAEQ--MP-------FTDERF 104 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCC-C--CC-------SCTTCE
T ss_pred CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEecHHh--CC-------CCCCCE
Confidence 458999999955444444211 126777776 5666655555554431 268888888753 21 222222
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
-++++-.+ .+++. ...+|+.+.+...||+.+++
T Consensus 105 D~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 105 HIVTCRIAAHHFPN--PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEhhhhHhcCC--HHHHHHHHHHHcCCCCEEEE
Confidence 35555544 56642 25688888888888887765
No 82
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=82.51 E-value=2.5 Score=36.60 Aligned_cols=65 Identities=9% Similarity=0.015 Sum_probs=44.1
Q ss_pred CceeEEeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCC----CHHHHHHHHHHHHhccCCCcEEEEeCChh
Q 024907 105 RSCLFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM----TLASFEDVLLLVGSLAMNKCLFLGELPAW 173 (260)
Q Consensus 105 ~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl----~~~~~~~ll~~i~~~~a~gs~l~~d~~~~ 173 (260)
.+++++..|+... .. .+. .+....--+|++-++ .|+ ..+....+|+.+.++..||+.++++...|
T Consensus 154 ~~v~f~~~d~~~~-~~-~~~--~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 154 NNVVFVTGNYVLD-RD-DLV--EAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPW 223 (292)
T ss_dssp TTEEEEECCCCCS-SH-HHH--TTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCH
T ss_pred ccceEEecccccC-cc-ccc--cccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCc
Confidence 4788888887632 11 221 123333457777777 476 56688999999999888999999886544
No 83
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=81.83 E-value=4.3 Score=33.65 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=61.9
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+....+.+++=+|. |++++.-++.++..+. +.++.++..|+.. +. + .+.-
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~--~~-------~-~~~f 104 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAG--YV-------A-NEKC 104 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTT--CC-------C-SSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHh--CC-------c-CCCC
Confidence 3579999999866544442111345677776 5555555555555432 2368888888763 21 1 1223
Q ss_pred eEEEEccCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv~-Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-++++-+++ +++ +...+|+.+.+...||+.+++.
T Consensus 105 D~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 105 DVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp EEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEE
T ss_pred CEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEe
Confidence 466666664 454 2466788888888898887764
No 84
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=81.69 E-value=2.8 Score=38.05 Aligned_cols=121 Identities=7% Similarity=0.080 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCC
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 115 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~ 115 (260)
.|+..+.+.+.+.....+ ...|+-||||.=.-...+......+++=||..++++.-++.++..+. +.+++++..|+.
T Consensus 46 ~r~~~~~~~i~~~~~~~~-~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~--~~~v~~~~~d~~ 122 (376)
T 3r0q_C 46 VRMDAYFNAVFQNKHHFE-GKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNL--DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHHHHTTTTTTT-TCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTC--TTTEEEEESCGG
T ss_pred HHHHHHHHHHHhccccCC-CCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCC--CCeEEEEECchh
Confidence 466666666655433222 35799999998654444421112255555555555555555555542 236888888875
Q ss_pred CchHHHHHHhcCCCCCCCeEEEEccCCC-CC-HHHHHHHHHHHHhccCCCcEEEEe
Q 024907 116 SSNIQQALRAKGFNGNRPSVWAIQGLPV-MT-LASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 116 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-l~-~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
. +. +. ..--+++++.+.| +. +.....+++.+.++..||+.++++
T Consensus 123 ~--~~-------~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 123 D--IS-------LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp G--CC-------CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred h--cC-------cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 2 21 11 3446888888754 43 345778899998888899888765
No 85
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=81.55 E-value=3.7 Score=34.63 Aligned_cols=147 Identities=9% Similarity=0.075 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCC
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES 116 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~ 116 (260)
-.+|++-.......+....|+-||||+=+.+..+ ...++++|+=+|. +.++++-++.+...+.. .+.++ .|+
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~--~~v~~--~d~-- 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT--IKYRF--LNK-- 107 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS--SEEEE--ECC--
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ccEEE--ecc--
Confidence 3566664442221133568999999999999988 3334679999998 56777777777766421 13333 333
Q ss_pred chHHHHHHhcCCCCCCC-eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHH
Q 024907 117 SNIQQALRAKGFNGNRP-SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFM 194 (260)
Q Consensus 117 ~dw~~~L~~~Gfd~~~P-tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~ 194 (260)
..... ..| =++++-=+ .+| ++.-..+.+.+..+-++|-.|.|+.-. +.-...++......|.++...
T Consensus 108 ---~~~~~------~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfptks-l~Gr~~gm~~~Y~~~~~~~~~ 176 (200)
T 3fzg_A 108 ---ESDVY------KGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFPIKS-LSGKEKGMEENYQLWFESFTK 176 (200)
T ss_dssp ---HHHHT------TSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEECCC-CC--CTTCCCCHHHHHHHHTT
T ss_pred ---cccCC------CCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeChHH-hcCCCcchhhhHHHHHHHhcc
Confidence 22222 233 24555445 577 544344554444444344456677211 100001333444555667779
Q ss_pred hCCceeee
Q 024907 195 SNGFGVGM 202 (260)
Q Consensus 195 ~~Gw~~~~ 202 (260)
+.+|.++.
T Consensus 177 ~~~~~~~~ 184 (200)
T 3fzg_A 177 GWIKILDS 184 (200)
T ss_dssp TTSCEEEE
T ss_pred Ccceeeee
Confidence 99998853
No 86
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=81.41 E-value=8.8 Score=32.28 Aligned_cols=125 Identities=13% Similarity=0.071 Sum_probs=69.6
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||-=.-...+.......++=||. |+.++.-++.+...+. ..+++++..|+. ++... +..+.-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~--~~~v~~~~~D~~--~~~~~-----~~~~~f 120 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL--EDQIEIIEYDLK--KITDL-----IPKERA 120 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC--TTTEEEECSCGG--GGGGT-----SCTTCE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC--cccEEEEECcHH--Hhhhh-----hccCCc
Confidence 4689999999776555552211225666665 4555544444444432 236788888875 22211 222333
Q ss_pred eEEEEccCCCCCH--------------------HHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHH
Q 024907 134 SVWAIQGLPVMTL--------------------ASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLF 193 (260)
Q Consensus 134 tl~i~EGv~Yl~~--------------------~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~ 193 (260)
-++++-- +|+.. .....+++.+.++..||+.+++-.+... .......+
T Consensus 121 D~Ii~np-Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~~~~~l 188 (259)
T 3lpm_A 121 DIVTCNP-PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER-----------LLDIIDIM 188 (259)
T ss_dssp EEEEECC-CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT-----------HHHHHHHH
T ss_pred cEEEECC-CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH-----------HHHHHHHH
Confidence 4555521 23322 4456788899988889888887543211 11133557
Q ss_pred HhCCcee
Q 024907 194 MSNGFGV 200 (260)
Q Consensus 194 ~~~Gw~~ 200 (260)
..+||..
T Consensus 189 ~~~~~~~ 195 (259)
T 3lpm_A 189 RKYRLEP 195 (259)
T ss_dssp HHTTEEE
T ss_pred HHCCCce
Confidence 7889875
No 87
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=80.95 E-value=12 Score=29.97 Aligned_cols=98 Identities=7% Similarity=-0.058 Sum_probs=55.4
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC-
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR- 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~- 132 (260)
...|+-+|||.=.-...+... +.+++=||. |.+++.-++. .+..++..++. + +....+.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~ 116 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA---------GAGEVHLASYA--Q----LAEAKVPVGKD 116 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT---------CSSCEEECCHH--H----HHTTCSCCCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh---------cccccchhhHH--h----hcccccccCCC
Confidence 368999999986655555322 456777776 3443322211 14555655543 1 2111222333
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
--++++-.+++ ..+...+++.+.+...||+.+++..
T Consensus 117 fD~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 117 YDLICANFALL--HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEEEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 34666655544 3445678888888888888877653
No 88
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=80.80 E-value=3.2 Score=33.90 Aligned_cols=110 Identities=9% Similarity=0.010 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
..+.+.+.+.+. +...|+-+|||.=.-...+... +.+++=+|. |++++.-++.+ .+.+++..|+...
T Consensus 28 ~~~~~~l~~~~~---~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 28 SDIADLVRSRTP---EASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL--------PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHHCT---TCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTC
T ss_pred HHHHHHHHHhcC---CCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHc
Confidence 345555555542 2357999999976654444211 124566666 45554433322 1467888887531
Q ss_pred hHHHHHHhcCCCCCCCeEEE-EccC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 118 NIQQALRAKGFNGNRPSVWA-IQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i-~EGv-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
. + +..--+++ +-++ .|+ ++++...+++.+.++..||+.++++.
T Consensus 96 ~---------~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 96 R---------L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp C---------C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred c---------c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 1 12234555 4556 577 45788999999999888999988873
No 89
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=80.64 E-value=4.4 Score=36.11 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=60.9
Q ss_pred CcceEEEeCCCC-CCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCC
Q 024907 54 GLKQVVLLTDGM-DTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 130 (260)
Q Consensus 54 g~~QVV~LGaGl-DTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~ 130 (260)
....|+.+|||- --.+.-+ ..+ +.+++-||. |++++.-++.++..+. .+.+++..|+. ++ ...+||
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~--~l----~d~~FD- 190 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDET--VI----DGLEFD- 190 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGG--GG----GGCCCS-
T ss_pred CcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchh--hC----CCCCcC-
Confidence 346899999994 2111222 123 456676666 6777776666666553 37888888875 22 234454
Q ss_pred CCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 131 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 131 ~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.+| +.++ .++..++++.+.+...||+.+++...
T Consensus 191 ---vV~-~~a~----~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 ---VLM-VAAL----AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---EEE-ECTT----CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---EEE-ECCC----ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 444 4444 13345688888888889998887643
No 90
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=80.62 E-value=5.4 Score=33.90 Aligned_cols=99 Identities=10% Similarity=-0.052 Sum_probs=64.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +..++=||. |..++.-++.+...+ .+.+++..|+..... .+.-
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~----------~~~f 185 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI----------QENY 185 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC----------CSCE
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc----------cCCc
Confidence 357999999976544444222 346666666 455555445555442 157788887652111 1233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
-++++-++ .+++.+....+++.+.++..||+.+++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 46777777 578888889999999998888887543
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=79.67 E-value=5.1 Score=33.11 Aligned_cols=134 Identities=11% Similarity=0.026 Sum_probs=68.4
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+......+++=||. |++++.-++..+..+ .+.+++..|+. ++... +..+.=-
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~--~~~~~-----~~~~~fD 130 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWE--DVAPT-----LPDGHFD 130 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHH--HHGGG-----SCTTCEE
T ss_pred CeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHH--Hhhcc-----cCCCceE
Confidence 579999999765554452211235666666 445554444444332 25666666543 22111 2222223
Q ss_pred EEEE--ccC--CCCCHHHHHHHHHHHHhccCCCcEEEE-eCChhhhhhhcCCCcchhHHH---HHHHHhCCcee
Q 024907 135 VWAI--QGL--PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWM---DKLFMSNGFGV 200 (260)
Q Consensus 135 l~i~--EGv--~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~~~~~~~~~~~~~~~~~w~---~~~~~~~Gw~~ 200 (260)
++++ =++ .+........+++.+.++..||+.+++ ++..+..............|. ...+...||.+
T Consensus 131 ~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred EEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 4554 221 234445566788889988889888774 433221111111111111121 24678899984
No 92
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=79.51 E-value=8.5 Score=31.21 Aligned_cols=107 Identities=13% Similarity=0.030 Sum_probs=62.1
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-+|||.=.-...+ ..|.+.+++=||. |+.++.-++.++..+. ..+++++..|.. ++...+...+ ....
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~-~~~~ 140 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAK--DTLAELIHAG-QAWQ 140 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHTTT-CTTC
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHH--HHHHHhhhcc-CCCC
Confidence 57999999865444333 2343566776666 5555555555665543 235778877753 3333443211 1122
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
--++++-+. ......+++.+.++..||+.++++-.
T Consensus 141 fD~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 141 YDLIYIDAD----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccEEEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 234443332 44456678888888889999888754
No 93
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=78.30 E-value=0.83 Score=38.53 Aligned_cols=103 Identities=11% Similarity=0.001 Sum_probs=59.5
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
..|+.+|||.=.-+-.+. .|..++.+|++ |++++.-++..... +.+.+++..|.. ++...+....||
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~-~~~~~~a~~~~~~~----~~~~~~~~~~a~--~~~~~~~~~~FD---- 130 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECN-DGVFQRLRDWAPRQ----THKVIPLKGLWE--DVAPTLPDGHFD---- 130 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECC-HHHHHHHHHHGGGC----SSEEEEEESCHH--HHGGGSCTTCEE----
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCC-HHHHHHHHHHHhhC----CCceEEEeehHH--hhcccccccCCc----
Confidence 579999999865444442 34456778887 77777655555443 224555554432 222222222333
Q ss_pred eEEEEccC-C-C--CCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 134 SVWAIQGL-P-V--MTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 134 tl~i~EGv-~-Y--l~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.++...+ . + ....+...+++.+.++..||+.++|..
T Consensus 131 -~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 131 -GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 3333333 1 2 223455778888888888999988754
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=78.03 E-value=20 Score=27.64 Aligned_cols=104 Identities=10% Similarity=-0.030 Sum_probs=61.8
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCC-ceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPR-SCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~-~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+... +..++=+|. |+.++.-++.+...+. +. +.+++..|+.. .. ..+.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~~d~~~-~~---------~~~~ 119 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL--DNYDIRVVHSDLYE-NV---------KDRK 119 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC--TTSCEEEEECSTTT-TC---------TTSC
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECchhc-cc---------ccCC
Confidence 358999999975544444221 445666665 4555544444444331 11 37888888753 11 1223
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
--++++-...+...+....+++.+.++..||+.+++..+
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 346666544333467778899999988888888776643
No 95
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=77.80 E-value=5.7 Score=35.30 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=60.8
Q ss_pred CCcceEEEeCCCCCCccccc-CCC--CCcEEEEeChHHHHHHHHHHHhhcCC--------------------CCCCceeE
Q 024907 53 DGLKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGVGA--------------------KIPRSCLF 109 (260)
Q Consensus 53 ~g~~QVV~LGaGlDTR~~Rl-~~~--~~~~~~EvD~P~v~~~K~~~l~~~~~--------------------~~p~~~~~ 109 (260)
+..+.|+++|+|-=+-+.-+ ..+ ..++++|+|. +|++.-++.++.... ....++..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~-~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCH-HHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCH-HHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 55678999999876644333 332 4688999995 676766666653210 11235666
Q ss_pred EeccCCC----------chHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccC
Q 024907 110 LHVPLES----------SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAM 161 (260)
Q Consensus 110 v~vd~~~----------~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a 161 (260)
|-+|+.. ...-+.+..+ +.++ -.++..-|.+++..+.+..+++.+.+.|+
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~-L~p~-Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~ 220 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRC-LNPG-GIFVAQNGVCFLQQEEAIDSHRKLSHYFS 220 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHT-EEEE-EEEEEEEEESSSCCHHHHHHHHHHHHHCS
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHH-hCCC-CEEEEecCCcccChHHHHHHHHHHHhhCC
Confidence 6666531 1223333321 1111 12333334467777788888888888773
No 96
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=77.66 E-value=11 Score=30.38 Aligned_cols=104 Identities=9% Similarity=0.016 Sum_probs=63.4
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCC--CCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~--p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+... +.+++=+|. |.+++.-++.+...+... ..+..++..|+.... +..+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~ 100 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS---------FHDS 100 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC---------SCTT
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC---------CCCC
Confidence 357999999976544444222 456777776 555555455544433211 125677777775311 2223
Q ss_pred CCeEEEEccC-CCC-CHHHHHHHHHHHHhccCCCcEEEE
Q 024907 132 RPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl-~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
.--++++-++ .++ +++....+++.+.+...||+.+++
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 3456666666 566 467677899999998888887654
No 97
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=77.14 E-value=9.8 Score=33.96 Aligned_cols=94 Identities=6% Similarity=0.035 Sum_probs=63.2
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...|+-+|||.=.-...+ ..| +++++-+|.|++++.-+ + . .+++++..|+.. .+ +.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~----~----~-~~v~~~~~d~~~-~~----------~~ 267 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDLPQVIENAP----P----L-SGIEHVGGDMFA-SV----------PQ 267 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC----C----C-TTEEEEECCTTT-CC----------CC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeChHHHHHhhh----h----c-CCCEEEeCCccc-CC----------CC
Confidence 4568999999965544444 344 57888888887775311 1 1 258888888763 21 11
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE-Ee
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GE 169 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~-~d 169 (260)
--++++-.+ .+++.++...+|+.+.+...||+.++ .|
T Consensus 268 -~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 268 -GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp -EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 245566666 47888877899999999888888655 45
No 98
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=76.79 E-value=21 Score=32.08 Aligned_cols=144 Identities=13% Similarity=0.021 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHH-HHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPER-IFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~-v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
++.+.++...-. .....|+-+|||-=.-...+... +..++=||... +++. .+ +.+ ...+...+. .
T Consensus 94 ~~~~~l~~~~~~--~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~-a~---~~~------~~~~~~~~~-~ 159 (416)
T 4e2x_A 94 MLARDFLATELT--GPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAK-AR---EKG------IRVRTDFFE-K 159 (416)
T ss_dssp HHHHHHHHTTTC--SSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHH-HH---TTT------CCEECSCCS-H
T ss_pred HHHHHHHHHhCC--CCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHH-HH---HcC------CCcceeeec-h
Confidence 344444444321 22358999999987655555322 45788888853 3332 11 111 112222222 2
Q ss_pred hHHHHHH--hcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChh--hhhh---h----cCCCcch
Q 024907 118 NIQQALR--AKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW--LAET---E----FGNKSTT 185 (260)
Q Consensus 118 dw~~~L~--~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~--~~~~---~----~~~~~~~ 185 (260)
+..+.+. ...| -++++-++ .+++ +...+++.+.++..||+.+++..+.. .... . ......+
T Consensus 160 ~~~~~l~~~~~~f-----D~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 160 ATADDVRRTEGPA-----NVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp HHHHHHHHHHCCE-----EEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred hhHhhcccCCCCE-----EEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 2223332 2334 35555555 5675 45778889999888999988875431 1110 0 0111123
Q ss_pred hHHHHHHHHhCCcee-eee
Q 024907 186 EKWMDKLFMSNGFGV-GMV 203 (260)
Q Consensus 186 ~~w~~~~~~~~Gw~~-~~~ 203 (260)
...+..++..+||++ ++.
T Consensus 233 ~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp HHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEE
Confidence 344678899999996 443
No 99
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=75.34 E-value=8.3 Score=32.30 Aligned_cols=118 Identities=10% Similarity=-0.104 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccC--CCCCcEEEEeChHH-------HHHHHHHHHhhcCCCCCCcee
Q 024907 38 TKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPER-------IFKISAEKLEGVGAKIPRSCL 108 (260)
Q Consensus 38 tr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~P~-------v~~~K~~~l~~~~~~~p~~~~ 108 (260)
.+..+.++...-- .....|+-+|||.=.-...+. .+...+++=||..+ +++.-++.+...+. +.+++
T Consensus 29 ~~~~~~l~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--~~~v~ 104 (275)
T 3bkx_A 29 TAHRLAIAEAWQV--KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--GDRLT 104 (275)
T ss_dssp HHHHHHHHHHHTC--CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT--GGGEE
T ss_pred HHHHHHHHHHcCC--CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC--CCceE
Confidence 3445555554321 223589999999876665552 12235666666632 55554555554432 23688
Q ss_pred EEecc-CCCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 109 FLHVP-LESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 109 ~v~vd-~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
++..| +....+ .+....|| ++++-++ .+++... .+++.+..+.++|+.+++
T Consensus 105 ~~~~d~~~~~~~--~~~~~~fD-----~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 105 VHFNTNLSDDLG--PIADQHFD-----RVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp EECSCCTTTCCG--GGTTCCCS-----EEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEE
T ss_pred EEECChhhhccC--CCCCCCEE-----EEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEE
Confidence 88887 322222 11122233 4445455 4665432 367777777766777664
No 100
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=74.52 E-value=8.9 Score=30.45 Aligned_cols=111 Identities=13% Similarity=0.125 Sum_probs=62.6
Q ss_pred HHHHHHHHhhccCCcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCch
Q 024907 41 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN 118 (260)
Q Consensus 41 iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~d 118 (260)
+.+.+.+.+. + ...|+.+|||.=.-...+ ..+..+.-+|++ |.+++.-++.+.. . .+.+++..|+..
T Consensus 32 ~~~~l~~~~~--~-~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s-~~~~~~a~~~~~~----~-~~i~~~~~d~~~-- 100 (215)
T 2pxx_A 32 FRALLEPELR--P-EDRILVLGCGNSALSYELFLGGFPNVTSVDYS-SVVVAAMQACYAH----V-PQLRWETMDVRK-- 100 (215)
T ss_dssp HHHHHGGGCC--T-TCCEEEETCTTCSHHHHHHHTTCCCEEEEESC-HHHHHHHHHHTTT----C-TTCEEEECCTTS--
T ss_pred HHHHHHHhcC--C-CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCC-HHHHHHHHHhccc----C-CCcEEEEcchhc--
Confidence 4445555543 2 357999999976544444 222234444444 4444443333332 1 267788888753
Q ss_pred HHHHHHhcCCCCCCCeEEEEccCC-CCC-------------HHHHHHHHHHHHhccCCCcEEEEe
Q 024907 119 IQQALRAKGFNGNRPSVWAIQGLP-VMT-------------LASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 119 w~~~L~~~Gfd~~~Ptl~i~EGv~-Yl~-------------~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+ .+..+.--++++-+++ ++. .+....+++.+.+...||+.+++-
T Consensus 101 ~-------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 101 L-------DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp C-------CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-------CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 1 1233344567766652 333 456678888888888888876653
No 101
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=73.87 E-value=28 Score=26.70 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=67.2
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+.+|||.=.-...+... ..+++=+|. |+.++.-++.+...+. ..++.++..|+. +.+... ...
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~-----~~~~~~----~~~ 101 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGL--GDNVTLMEGDAP-----EALCKI----PDI 101 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC--CTTEEEEESCHH-----HHHTTS----CCE
T ss_pred CCEEEEECCCCCHHHHHHHHh-cCEEEEEECCHHHHHHHHHHHHHcCC--CcceEEEecCHH-----HhcccC----CCC
Confidence 358999999975443333211 144555555 4555544444444432 125666665542 233221 234
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCceeee
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGM 202 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~~ 202 (260)
-++++-++. .....+++.+.++..||+.+++..+... ......+++..+||.++.
T Consensus 102 D~v~~~~~~----~~~~~~l~~~~~~l~~gG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 102 DIAVVGGSG----GELQEILRIIKDKLKPGGRIIVTAILLE----------TKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp EEEEESCCT----TCHHHHHHHHHHTEEEEEEEEEEECBHH----------HHHHHHHHHHHTTCCCEE
T ss_pred CEEEECCch----HHHHHHHHHHHHhcCCCcEEEEEecCcc----------hHHHHHHHHHHCCCceEE
Confidence 566665542 2346788888888888888877643211 111234678899997654
No 102
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=73.60 E-value=10 Score=32.01 Aligned_cols=95 Identities=6% Similarity=0.024 Sum_probs=57.7
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+..+ +..++=+|. |++++.-++.+ .+++++..|+.. |. ++ +.-
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~--~~-------~~-~~f 118 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY--------PHLHFDVADARN--FR-------VD-KPL 118 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTT--CC-------CS-SCE
T ss_pred CCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhh--CC-------cC-CCc
Confidence 358999999976554444333 456777777 45555433322 157788888763 21 21 222
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
-++++-.+ .+++. ...+++.+.+...||+.+++..
T Consensus 119 D~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 119 DAVFSNAMLHWVKE--PEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEcchhhhCcC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 35555555 45542 3467888888888998887754
No 103
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=73.59 E-value=32 Score=27.26 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=70.0
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..| ..+++=||. |+.++.-++.++..+. .+.+++..|+.. .+. . ..
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~-~~~-~-------~~ 107 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPE-GLD-D-------LP 107 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTT-TCT-T-------SC
T ss_pred CCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhh-hhh-c-------CC
Confidence 357999999965444444 233 456666666 5555554555555432 267888888742 110 0 02
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCceeee
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGM 202 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~~ 202 (260)
..-++++-+..+ ....+++.+.+...||+.+++..+..- ......+++..+||.++.
T Consensus 108 ~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 108 DPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAVTLD----------TLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp CCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEECBHH----------HHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEecccc----------cHHHHHHHHHHCCCceeE
Confidence 234555555433 456778888888889988887643211 111234678899996543
No 104
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=73.11 E-value=1.8 Score=36.70 Aligned_cols=108 Identities=13% Similarity=0.023 Sum_probs=58.4
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..+.+.+++-||. |+.++.-++.++..+. ..+++++..|.. ++...+...| ..+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~~~~~~-~~~ 135 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPAL--DTLHSLLNEG-GEH 135 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHHH-CSS
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHhhcc-CCC
Confidence 357999999754433333 2333455555555 3444433444454432 236888887764 3444443211 011
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.--++++-+. .......++.+.++..||+.+++|-.
T Consensus 136 ~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 136 QFDFIFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp CEEEEEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CEeEEEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 1124444443 34445677778887789999998743
No 105
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=72.90 E-value=7.9 Score=31.63 Aligned_cols=109 Identities=10% Similarity=0.053 Sum_probs=59.6
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+. .+.+.+++-||. |+.++.-++.++..+. ..+++++..|.. ++...+.. .++..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~l~~~~~-~~~~~ 133 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQ--DLIPQLKK-KYDVD 133 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHGGGTTT-TSCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHH--HHHHHHHH-hcCCC
Confidence 3589999998755444442 233566777776 5566655555555442 225777777653 22222211 11123
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.--++++-+. ..+ .....++..+ ++..||+.++++-.
T Consensus 134 ~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 134 TLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred ceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCC
Confidence 3346666665 222 1223455555 66779999998743
No 106
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=72.58 E-value=6.9 Score=36.58 Aligned_cols=109 Identities=11% Similarity=0.071 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCC------CCCccccc---CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeE
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDG------MDTRPYRL---NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLF 109 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaG------lDTR~~Rl---~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~ 109 (260)
.+++.++..... ....|+-|||| .---..++ ..| +..++=||.-+.+. .. ..++++
T Consensus 204 ~~Ye~lL~~l~~---~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP-~a~V~GVDiSp~m~------~~-----~~rI~f 268 (419)
T 3sso_A 204 PHYDRHFRDYRN---QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP-RGQIYGLDIMDKSH------VD-----ELRIRT 268 (419)
T ss_dssp HHHHHHHGGGTT---SCCEEEEECCSCTTCSSCCCHHHHHHHHHCT-TCEEEEEESSCCGG------GC-----BTTEEE
T ss_pred HHHHHHHHhhcC---CCCEEEEEecCCCcCCCCCHHHHHHHHHhCC-CCEEEEEECCHHHh------hc-----CCCcEE
Confidence 345555554432 24689999999 21222222 234 46777788743321 11 237999
Q ss_pred EeccCCCchHHHHHHh--cCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 110 LHVPLESSNIQQALRA--KGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 110 v~vd~~~~dw~~~L~~--~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+..|+....+.+.+.. ..|| +|++.|..+. .+....|+.+.....||+.++++
T Consensus 269 v~GDa~dlpf~~~l~~~d~sFD-----lVisdgsH~~--~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 269 IQGDQNDAEFLDRIARRYGPFD-----IVIDDGSHIN--AHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EECCTTCHHHHHHHHHHHCCEE-----EEEECSCCCH--HHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEecccccchhhhhhcccCCcc-----EEEECCcccc--hhHHHHHHHHHHhcCCCeEEEEE
Confidence 9999875455545542 3354 6677776443 45677888888888899988875
No 107
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=72.52 E-value=3.3 Score=34.43 Aligned_cols=140 Identities=11% Similarity=0.003 Sum_probs=73.2
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCC---------------CC-----------Cce-
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAK---------------IP-----------RSC- 107 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~---------------~p-----------~~~- 107 (260)
..|+-+|||.=.-...+.......++=+|. |.+++.-++.+...+.. .+ .++
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~ 137 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIK 137 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEE
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhhe
Confidence 579999999844444332221136777777 44454434444332100 00 015
Q ss_pred eEEeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCCC--HHHHHHHHHHHHhccCCCcEEEEeCC-hh--hh--hhhc
Q 024907 108 LFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMT--LASFEDVLLLVGSLAMNKCLFLGELP-AW--LA--ETEF 179 (260)
Q Consensus 108 ~~v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~--~~~~~~ll~~i~~~~a~gs~l~~d~~-~~--~~--~~~~ 179 (260)
+++..|+...... .. ...+.--++++-.+ .++. .++...+++.+.++..||+.+++... .. .. ....
T Consensus 138 ~~~~~d~~~~~~~---~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 138 QVLKCDVTQSQPL---GG--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp EEEECCTTSSSTT---TT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred eEEEeeeccCCCC---Cc--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 7778887632210 00 11123346666666 4443 34778899999998889888765431 10 00 0000
Q ss_pred CCCcchhHHHHHHHHhCCcee
Q 024907 180 GNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 180 ~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
.........+.++|..+||.+
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~ 233 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTI 233 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEE
T ss_pred cccccCHHHHHHHHHHCCCEE
Confidence 111223334568889999996
No 108
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=72.34 E-value=23 Score=29.61 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=62.0
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHh-cCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-KGFNG 130 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~-~Gfd~ 130 (260)
...|+-+|||.=.-...+ ..|++.+++=||. |+.++.-++.++..+. +.+++++..|+. +....+.. ..||
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~--~~l~~~~~~~~fD- 138 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPAL--QSLESLGECPAFD- 138 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHTCCSCCCCS-
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHhcCCCCCeE-
Confidence 368999999975443333 2333566777777 6666665666665543 236777777653 22222110 1233
Q ss_pred CCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 131 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 131 ~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
++++-+ ........++.+.++..||+.++++-.
T Consensus 139 ----~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 139 ----LIFIDA----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ----EEEECS----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ----EEEECC----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 444433 234445678888888889999998854
No 109
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=71.41 E-value=16 Score=30.14 Aligned_cols=109 Identities=11% Similarity=-0.015 Sum_probs=60.2
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..+.+.+++-+|. |+.++.-++.+...+. ..+.+++..|.. ++...+...+ ..+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~--~~l~~l~~~~-~~~ 147 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPAL--ATLEQLTQGK-PLP 147 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHHHHHHTSS-SCC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhcC-CCC
Confidence 357999999843323333 2333455666665 4555554555555432 225777776653 3334443210 001
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCCh
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 172 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~ 172 (260)
.--++++-+. ......+++.+.++..||+.+++|-..
T Consensus 148 ~fD~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 148 EFDLIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CEEEEEECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CcCEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 2235554443 344566788888888899999988543
No 110
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=71.10 E-value=11 Score=35.59 Aligned_cols=121 Identities=7% Similarity=0.032 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCC
Q 024907 36 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 115 (260)
Q Consensus 36 ~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~ 115 (260)
.|+..+-+.+.+.+...+ ...|+-+|||.=.-+..+......+++=||..++++.-++.++..+. ..+++++..|+.
T Consensus 141 ~~t~~~~~~il~~l~~~~-~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl--~~~v~~~~~d~~ 217 (480)
T 3b3j_A 141 VRTGTYQRAILQNHTDFK-DKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL--TDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHHHTGGGTT-TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HhHHHHHHHHHHhhhhcC-CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCC--CCcEEEEECchh
Confidence 344444444444433212 35799999997655544422224577778877666555555555442 237889988876
Q ss_pred CchHHHHHHhcCCCCCCCeEEEEccCCC-CCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 116 SSNIQQALRAKGFNGNRPSVWAIQGLPV-MTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 116 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-l~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
.-. + +..--+++++++.| +..+.....+..+.+...||+.++.+
T Consensus 218 ~~~---------~-~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVS---------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCC---------C-SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCc---------c-CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 311 1 12335788887744 44455555666777777788888754
No 111
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=70.50 E-value=3.7 Score=36.42 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=62.9
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-+ + .+ +++++..|+.. .+. +||
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~----~----~~-~v~~~~~d~~~-~~p------~~D-- 248 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFP-KLKCIVFDRPQVVENLS----G----SN-NLTYVGGDMFT-SIP------NAD-- 248 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC----C----BT-TEEEEECCTTT-CCC------CCS--
T ss_pred cCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeCHHHHhhcc----c----CC-CcEEEeccccC-CCC------Ccc--
Confidence 4568999999976655554 345 56788888887765311 1 12 58888888753 221 233
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCC---CcEE-EEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMN---KCLF-LGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~---gs~l-~~d~ 170 (260)
++++-.+ .+++.++...+|+.+.+...| |+.+ +.|.
T Consensus 249 ---~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 249 ---AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred ---EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 4555555 578888778999999988888 7764 4564
No 112
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=70.12 E-value=43 Score=27.31 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=58.7
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++=+|. |++++.-++.+.. ...+++++..|+.. +. +..+.-
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~--~~-------~~~~~f 105 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAG----VDRKVQVVQADARA--IP-------LPDESV 105 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTT----SCTTEEEEESCTTS--CC-------SCTTCE
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhc----cCCceEEEEccccc--CC-------CCCCCe
Confidence 458999999986655555322 345666666 4444443333321 12368888888752 21 222233
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-++++-.+ .+++ +...+++.+.+...||+.+++.
T Consensus 106 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 45555555 4564 2456788888887888887654
No 113
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=69.91 E-value=41 Score=27.21 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=69.5
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-+|||.=.-...| ..| +..++=||. +++++.-++.+...+. .+++++..|+. ++...+....|
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~---~nv~~~~~d~~--~l~~~~~~~~~---- 109 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA---QNVKLLNIDAD--TLTDVFEPGEV---- 109 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC---SSEEEECCCGG--GHHHHCCTTSC----
T ss_pred ceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC---CCEEEEeCCHH--HHHhhcCcCCc----
Confidence 47999999976544444 234 567777777 4444443444444331 26888888775 34333322222
Q ss_pred CeEEEEccCCCCCHHH------HHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 133 PSVWAIQGLPVMTLAS------FEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~------~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
-.+++.-..++..... ...+++.+.+...||+.+++..... ....|..+.+..+||..
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~----------~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR----------GLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH----------HHHHHHHHHHHHHTCEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCcc
Confidence 2444432223332111 2567888888778998887754210 11234556678889975
No 114
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=69.86 E-value=4 Score=34.01 Aligned_cols=104 Identities=11% Similarity=0.043 Sum_probs=57.8
Q ss_pred eEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 57 QVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 57 QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
.|+-+|||.=.-...| ..+.+.+++-||. |+.++.-++.++..+.. +.+.+++..|.. ++...+....||
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~--~~l~~~~~~~fD---- 131 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPL--DVMSRLANDSYQ---- 131 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHH--HHGGGSCTTCEE----
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHH--HHHHHhcCCCcC----
Confidence 7999999754333333 2333456666665 45555555556665432 136777776643 222222112233
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCCh
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 172 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~ 172 (260)
++++-+. ......+++.+.++..||+.+++|-.-
T Consensus 132 -~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 132 -LVFGQVS----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp -EEEECCC----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred -eEEEcCc----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4444443 222345677777777899999998543
No 115
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=69.69 E-value=12 Score=30.83 Aligned_cols=103 Identities=9% Similarity=0.100 Sum_probs=62.2
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+. .+ +.+++=||. |+.++.-++.++..+. +.+++++..|+.. .+.+.+ ...||
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~~~-~~~fD-- 144 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALE-QFENVN-DKVYD-- 144 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGG-CHHHHT-TSCEE--
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHH-HHHhhc-cCCcc--
Confidence 3579999998765444442 24 456777776 5566655556665542 2378888888752 222122 22233
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
++++-+- ......+++.+.++..||+.+++|-.
T Consensus 145 ---~V~~~~~----~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 145 ---MIFIDAA----KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp ---EEEEETT----SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ---EEEEcCc----HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 3443332 23345678888888889999998754
No 116
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=69.59 E-value=7.1 Score=35.00 Aligned_cols=102 Identities=8% Similarity=0.082 Sum_probs=51.7
Q ss_pred eEEEeCCCCCCccccc-C-CCC-CcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 57 QVVLLTDGMDTRPYRL-N-WPT-STIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 57 QVV~LGaGlDTR~~Rl-~-~~~-~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
.|+.||||-=+-...+ . +|. .++.+|+|. ++++.-++.+.... ..+.+++..|.. +|...+ ..+.-
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp-~vi~~Ar~~~~~~~---~~rv~v~~~Da~--~~l~~~-----~~~~f 160 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDA-ELARLSREWFDIPR---APRVKIRVDDAR--MVAESF-----TPASR 160 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCH-HHHHHHHHHSCCCC---TTTEEEEESCHH--HHHHTC-----CTTCE
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCH-HHHHHHHHhccccC---CCceEEEECcHH--HHHhhc-----cCCCC
Confidence 8999999976654444 2 443 466777774 55565445543211 125666666543 232221 11222
Q ss_pred eEEEEccC-C-CCCHH-HHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGL-P-VMTLA-SFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv-~-Yl~~~-~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-+|++-.. . +.... ...+.++.+.+...||+.+++.
T Consensus 161 DvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 161 DVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp EEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 35555433 2 22111 0144566666666677666654
No 117
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=67.94 E-value=27 Score=28.63 Aligned_cols=109 Identities=10% Similarity=0.062 Sum_probs=59.8
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHh------
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA------ 125 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~------ 125 (260)
...|+.+|||.=.-...+ ..+.+.+++=||. |+.++.-++.+...+. +.+++++..|+. ++...+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~--~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSAL--ETLQVLIDSKSAPS 136 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHCSSCCG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHH--HHHHHHHhhccccc
Confidence 357999999853322222 2332445666665 5555555555555432 224777777653 22233321
Q ss_pred --cCCCC--CCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 126 --KGFNG--NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 126 --~Gfd~--~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.+|.. +.--++++-+. .+....+++.+.++..||+.++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 23332 23345554433 33445677888887789999888754
No 118
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=67.34 E-value=11 Score=30.56 Aligned_cols=98 Identities=7% Similarity=-0.034 Sum_probs=55.9
Q ss_pred cceEEEeCCCCCCcccccC-CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+. .+. ..++=+|. |++++.-++.+.. .+++++..|+.... +..+.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~---------~~~~~ 107 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLH---------LPQDS 107 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCC---------CCTTC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhcc---------CCCCC
Confidence 3579999999754433332 221 15555555 4444433322221 25777777765211 22223
Q ss_pred CeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 133 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
--++++-.+ .+++ +...+++.+.+...||+.+++..
T Consensus 108 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 108 FDLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEe
Confidence 345666566 4564 34678888888888998887754
No 119
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=66.92 E-value=20 Score=30.09 Aligned_cols=69 Identities=12% Similarity=0.148 Sum_probs=40.1
Q ss_pred EEEEccC-CCC--CHHHHHHHHHHHHhccCCCcEEEEeCC-h--hhh--hhhcCCCcchhHHHHHHHHhCCcee-eee
Q 024907 135 VWAIQGL-PVM--TLASFEDVLLLVGSLAMNKCLFLGELP-A--WLA--ETEFGNKSTTEKWMDKLFMSNGFGV-GMV 203 (260)
Q Consensus 135 l~i~EGv-~Yl--~~~~~~~ll~~i~~~~a~gs~l~~d~~-~--~~~--~~~~~~~~~~~~w~~~~~~~~Gw~~-~~~ 203 (260)
++++=.+ .|+ +.++...+++.|.++..||+.+++... . +.. .........+...+.+.|.++||.+ +..
T Consensus 159 ~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 159 CVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp EEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEe
Confidence 4555444 443 457788899999999999998776521 1 000 0000001123334568899999996 443
No 120
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=66.24 E-value=19 Score=31.79 Aligned_cols=95 Identities=8% Similarity=-0.014 Sum_probs=62.4
Q ss_pred CcceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
+...||-+|||.=.-...+ ..| +.+++-+|.|++++.-+ ..+ +++++..|+.. .+. .|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~--------~~~-~v~~~~~d~~~-~~~------~~--- 252 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQPQVVGNLT--------GNE-NLNFVGGDMFK-SIP------SA--- 252 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEECHHHHSSCC--------CCS-SEEEEECCTTT-CCC------CC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEeccHHHHhhcc--------cCC-CcEEEeCccCC-CCC------Cc---
Confidence 3468999999976554444 344 56778788887764211 112 58888888763 211 13
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCC---CcEEE-EeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMN---KCLFL-GEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~---gs~l~-~d~ 170 (260)
-++++-.+ .+++.++...+|+.+.+...| |+.++ .|.
T Consensus 253 --D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 253 --DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp --SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred --eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 34555555 568888788999999998888 88654 564
No 121
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=65.18 E-value=49 Score=26.09 Aligned_cols=129 Identities=9% Similarity=0.009 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCC
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES 116 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~ 116 (260)
+.+-+.+...+. + ...|+-+|||.=.-...+ ..+ ...++=+|. |.+++.-++.+...+. + +.+++..|+..
T Consensus 48 ~~~~~~l~~~~~--~-~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~-~v~~~~~d~~~ 120 (205)
T 3grz_A 48 QLAMLGIERAMV--K-PLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNGI--Y-DIALQKTSLLA 120 (205)
T ss_dssp HHHHHHHHHHCS--S-CCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--C-CCEEEESSTTT
T ss_pred HHHHHHHHHhcc--C-CCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEeccccc
Confidence 344445555443 2 357999999975444334 233 345666666 5555554455554432 1 37788887752
Q ss_pred chHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEe-CChhhhhhhcCCCcchhHHHHHHHHh
Q 024907 117 SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE-LPAWLAETEFGNKSTTEKWMDKLFMS 195 (260)
Q Consensus 117 ~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d-~~~~~~~~~~~~~~~~~~w~~~~~~~ 195 (260)
. .++.--++++-.+ .+....+++.+.++..||+.+++. .... ......+.+..
T Consensus 121 --~---------~~~~fD~i~~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~~~~~ 174 (205)
T 3grz_A 121 --D---------VDGKFDLIVANIL----AEILLDLIPQLDSHLNEDGQVIFSGIDYL-----------QLPKIEQALAE 174 (205)
T ss_dssp --T---------CCSCEEEEEEESC----HHHHHHHGGGSGGGEEEEEEEEEEEEEGG-----------GHHHHHHHHHH
T ss_pred --c---------CCCCceEEEECCc----HHHHHHHHHHHHHhcCCCCEEEEEecCcc-----------cHHHHHHHHHH
Confidence 1 1122234444332 344577888888887888887764 2211 11224467788
Q ss_pred CCcee
Q 024907 196 NGFGV 200 (260)
Q Consensus 196 ~Gw~~ 200 (260)
+||++
T Consensus 175 ~Gf~~ 179 (205)
T 3grz_A 175 NSFQI 179 (205)
T ss_dssp TTEEE
T ss_pred cCCce
Confidence 99986
No 122
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=64.28 E-value=60 Score=27.55 Aligned_cols=106 Identities=14% Similarity=0.106 Sum_probs=53.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh--HHHHHHHHHHH-----hhcCCC--CCCceeEEeccCCC--chHHHHHH
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP--ERIFKISAEKL-----EGVGAK--IPRSCLFLHVPLES--SNIQQALR 124 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~--P~v~~~K~~~l-----~~~~~~--~p~~~~~v~vd~~~--~dw~~~L~ 124 (260)
..|+-||||.=.-..-+......+++=+|. |++++.-++.+ +..+.. ...+++++..+... .++...+.
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 579999999544333332111236777776 56666544444 221110 00245555555431 22222221
Q ss_pred hcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccC---C--CcEEE
Q 024907 125 AKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAM---N--KCLFL 167 (260)
Q Consensus 125 ~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a---~--gs~l~ 167 (260)
...| -++++-.++|. .+....+++.+.++.. | |+.++
T Consensus 161 ~~~f-----D~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~ 202 (281)
T 3bzb_A 161 LQRF-----QVVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVAL 202 (281)
T ss_dssp CSSB-----SEEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEE
T ss_pred CCCC-----CEEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 2223 35555444454 3446778888888777 7 87544
No 123
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=64.05 E-value=35 Score=27.39 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=69.2
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-||||.=.-...+ ..| +..++=||. |++++.-++.+...+. .+++++..|+.. +.+.+ ..+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~--~~~~~-----~~~ 110 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSD--LTDYF-----EDG 110 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSC--GGGTS-----CTT
T ss_pred CCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHH--HHhhc-----CCC
Confidence 357999999966544444 234 456666666 4555544444444432 378888888762 22212 222
Q ss_pred CCeEEEEccC-CCCCHH------HHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 132 RPSVWAIQGL-PVMTLA------SFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~------~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
.--++++-.. .+.... ....+++.+.+...||+.+++..... ....+..+.+..+||.+
T Consensus 111 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 111 EIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR----------GLFEYSLVSFSQYGMKL 176 (214)
T ss_dssp CCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH----------HHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH----------HHHHHHHHHHHHCCCee
Confidence 2223333222 232211 12468888888888898887754210 01234556788889986
No 124
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=63.85 E-value=26 Score=28.69 Aligned_cols=131 Identities=11% Similarity=0.091 Sum_probs=72.6
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... ...++-+|. |++++.-++.+...+. .+++++..|+.. +. +..+.-
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~--~~-------~~~~~f 88 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAES--LP-------FPDDSF 88 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTB--CC-------SCTTCE
T ss_pred CCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEeccccc--CC-------CCCCcE
Confidence 457999999986644444221 235666665 4555544444444431 267888888752 21 222333
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCC--h-h-hhhh-------h--cCCCcchhHHHHHHHHhCCc
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELP--A-W-LAET-------E--FGNKSTTEKWMDKLFMSNGF 198 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~--~-~-~~~~-------~--~~~~~~~~~w~~~~~~~~Gw 198 (260)
-++++-.+ .+++ +...+++.+.+...||+.+++ +.. . . .... . ............++|..+||
T Consensus 89 D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 166 (239)
T 1xxl_A 89 DIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQL 166 (239)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTE
T ss_pred EEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCC
Confidence 46666655 4554 235678888888888887665 432 1 1 1100 0 01122223334578999999
Q ss_pred ee
Q 024907 199 GV 200 (260)
Q Consensus 199 ~~ 200 (260)
.+
T Consensus 167 ~~ 168 (239)
T 1xxl_A 167 AY 168 (239)
T ss_dssp EE
T ss_pred cE
Confidence 85
No 125
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=63.25 E-value=5 Score=32.48 Aligned_cols=101 Identities=13% Similarity=0.042 Sum_probs=54.5
Q ss_pred cceEEEeCCCCC--CcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMD--TRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlD--TR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.= |..+--..+.+.+++-||. |++++.-++.++..+. ..+++++..|.. +.+.. .+ +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-----~~~~~--~~-~ 126 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPL-----GIAAG--QR-D 126 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHH-----HHHTT--CC-S
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHH-----HHhcc--CC-C
Confidence 357999999754 3333222332455666665 4555554445554432 125667766542 22221 11 1
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
--++++-+- ......+++.+.++..||+.++++-
T Consensus 127 -fD~v~~~~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 127 -IDILFMDCD----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp -EEEEEEETT----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred -CCEEEEcCC----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 234443332 2334567888888888999998874
No 126
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=62.51 E-value=63 Score=30.25 Aligned_cols=116 Identities=9% Similarity=-0.002 Sum_probs=65.3
Q ss_pred HHHHHHHHHhhccCCcceEEEeCCCCCCcccccC--CCCCcEEEEeChH-HHHHHHHHH-------HhhcCCCCCCceeE
Q 024907 40 FIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPE-RIFKISAEK-------LEGVGAKIPRSCLF 109 (260)
Q Consensus 40 ~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~P-~v~~~K~~~-------l~~~~~~~p~~~~~ 109 (260)
++..++...-- .....|+-||||.=.-...+. .+ ...++=||.- +.++.-++. ++..+.. ..++.+
T Consensus 161 ~i~~il~~l~l--~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVef 236 (438)
T 3uwp_A 161 LVAQMIDEIKM--TDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTL 236 (438)
T ss_dssp HHHHHHHHHCC--CTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEE
T ss_pred HHHHHHHhcCC--CCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEE
Confidence 34555544311 233579999999877666552 23 2347777774 333322221 2222221 137899
Q ss_pred EeccCCCchHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 110 LHVPLESSNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 110 v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
+..|+....+...+. .-+++++..+ |+.++. ...|..+.....||+.|+.
T Consensus 237 i~GD~~~lp~~d~~~-------~aDVVf~Nn~-~F~pdl-~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 237 ERGDFLSEEWRERIA-------NTSVIFVNNF-AFGPEV-DHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EECCTTSHHHHHHHH-------TCSEEEECCT-TCCHHH-HHHHHHHHTTSCTTCEEEE
T ss_pred EECcccCCccccccC-------CccEEEEccc-ccCchH-HHHHHHHHHcCCCCcEEEE
Confidence 999987544433322 3456666654 666554 4455666666778998774
No 127
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=62.17 E-value=22 Score=27.64 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCch
Q 024907 40 FIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN 118 (260)
Q Consensus 40 ~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~d 118 (260)
+...++...+. +| ..|+-+|||.=.-...+... +.+++=||. |++++.-++.++..+. .+++++..+.. +
T Consensus 11 ~~~~~l~~~~~--~~-~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~--~ 81 (185)
T 3mti_A 11 MSHDFLAEVLD--DE-SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHE--N 81 (185)
T ss_dssp HHHHHHHTTCC--TT-CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGG--G
T ss_pred HHHHHHHHhCC--CC-CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHH--H
Confidence 33444554443 33 57999999975555555322 456777776 5566655555555442 26777774443 2
Q ss_pred HHHHHHhcCCCCCCCeEEEEccCCCCC---------HHHHHHHHHHHHhccCCCcEEEEe
Q 024907 119 IQQALRAKGFNGNRPSVWAIQGLPVMT---------LASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 119 w~~~L~~~Gfd~~~Ptl~i~EGv~Yl~---------~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+... .++.--++++- +.|++ ++.....++.+.+...||+.+++-
T Consensus 82 l~~~------~~~~fD~v~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 82 LDHY------VREPIRAAIFN-LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp GGGT------CCSCEEEEEEE-EC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhh------ccCCcCEEEEe-CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 2111 11112233322 23443 355667788888877788876543
No 128
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=62.11 E-value=31 Score=26.32 Aligned_cols=92 Identities=16% Similarity=-0.018 Sum_probs=54.2
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+.... .+++=+|. |++++.-++. . + +++++..| + .+..+.-
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~---~----~-~v~~~~~d---------~---~~~~~~~ 76 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK---F----D-SVITLSDP---------K---EIPDNSV 76 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH---C----T-TSEEESSG---------G---GSCTTCE
T ss_pred CCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh---C----C-CcEEEeCC---------C---CCCCCce
Confidence 4589999999876665553221 26666776 4444433322 1 1 56677666 1 1223344
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-++++-.+ .+++ +...+++.+.+...||+.+++.
T Consensus 77 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 77 DFILFANSFHDMD--DKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp EEEEEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEccchhccc--CHHHHHHHHHHhcCCCCEEEEE
Confidence 46666666 4564 3457888888887888876643
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=61.27 E-value=26 Score=27.50 Aligned_cols=22 Identities=9% Similarity=-0.070 Sum_probs=17.0
Q ss_pred HHHHHHHHhccCCCcE-EEEeCC
Q 024907 150 EDVLLLVGSLAMNKCL-FLGELP 171 (260)
Q Consensus 150 ~~ll~~i~~~~a~gs~-l~~d~~ 171 (260)
..+++.+.++..||+. ++++.+
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHHhcCCCeEEEEEEC
Confidence 6677777777788988 888764
No 130
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=61.02 E-value=45 Score=28.93 Aligned_cols=153 Identities=8% Similarity=-0.018 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEe
Q 024907 33 HYCLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLH 111 (260)
Q Consensus 33 ~~~~Rtr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~ 111 (260)
+.-.|--.+|.+-...... ....-|+-||||+=+.+.-+- + +.+|+=+|. +..+++=++.+...+ .+..+..
T Consensus 85 STrerLp~ld~fY~~i~~~-~~p~~VLDlGCG~gpLal~~~-~-~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v 157 (253)
T 3frh_A 85 STKERLAELDTLYDFIFSA-ETPRRVLDIACGLNPLALYER-G-IASVWGCDIHQGLGDVITPFAREKD----WDFTFAL 157 (253)
T ss_dssp HHHHHGGGHHHHHHHHTSS-CCCSEEEEETCTTTHHHHHHT-T-CSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEE
T ss_pred CHHHHhhhHHHHHHHHhcC-CCCCeEEEecCCccHHHHHhc-c-CCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEE
Confidence 3445555778777666553 345689999999998765443 3 455555555 345555555565543 1567777
Q ss_pred ccCCCchHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHH
Q 024907 112 VPLESSNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDK 191 (260)
Q Consensus 112 vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~ 191 (260)
+|+....+. ..--++++.--+.+|..++-..+++.+..+-+++-.+.|+.-. +.-...++......|.++
T Consensus 158 ~D~~~~~~~---------~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtks-l~Gr~~gm~~~Y~~~~e~ 227 (253)
T 3frh_A 158 QDVLCAPPA---------EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRS-LGGRGKGMEANYAAWFEG 227 (253)
T ss_dssp CCTTTSCCC---------CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC------------CHHHHHHH
T ss_pred eecccCCCC---------CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHH-hcCCCcchhhHHHHHHHH
Confidence 787632211 1111333433335676555556667777776566556676211 110001233334455567
Q ss_pred HHHhCCceeee
Q 024907 192 LFMSNGFGVGM 202 (260)
Q Consensus 192 ~~~~~Gw~~~~ 202 (260)
+..+.+|.++.
T Consensus 228 ~~~~~~~~~~~ 238 (253)
T 3frh_A 228 GLPAEFEIEDK 238 (253)
T ss_dssp HSCTTEEEEEE
T ss_pred Hhhccchhhhh
Confidence 77888998753
No 131
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=60.80 E-value=25 Score=28.62 Aligned_cols=101 Identities=14% Similarity=0.223 Sum_probs=58.1
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHH-hcCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALR-AKGFNGN 131 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~-~~Gfd~~ 131 (260)
..|+.+|||.=.-...+ ..| +.+++=+|. |+.++.-++.+...+. ..+.+++..|+. ++...+. ...|
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~~f--- 127 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDAL--QLGEKLELYPLF--- 127 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGG--GSHHHHTTSCCE---
T ss_pred CEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHH--HHHHhcccCCCc---
Confidence 57999999954333333 233 456777776 5555555555555442 225777777764 2222221 1123
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
-++++-+. .+....+++.+.++..||+.++++-
T Consensus 128 --D~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 128 --DVLFIDAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp --EEEEEEGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred --cEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 34444333 1244667888888888999988873
No 132
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=60.50 E-value=41 Score=27.03 Aligned_cols=124 Identities=8% Similarity=-0.038 Sum_probs=65.2
Q ss_pred cceEEEeCCC-CCCcccccC-C-CCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCC-chHHHHHHhcCCCC
Q 024907 55 LKQVVLLTDG-MDTRPYRLN-W-PTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLES-SNIQQALRAKGFNG 130 (260)
Q Consensus 55 ~~QVV~LGaG-lDTR~~Rl~-~-~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~-~dw~~~L~~~Gfd~ 130 (260)
...|+-+||| .=.-...+. . ...+.-+|++. .+++.-++.+...+. +++++..|+.. ..+ ..
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~-~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~~---------~~ 121 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDE-EFFEYARRNIERNNS----NVRLVKSNGGIIKGV---------VE 121 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCH-HHHHHHHHHHHHTTC----CCEEEECSSCSSTTT---------CC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCH-HHHHHHHHHHHHhCC----CcEEEeCCchhhhhc---------cc
Confidence 3589999999 544333331 1 22344455554 444443444444431 57788888641 111 11
Q ss_pred CCCeEEEEccCCCCCHH-------------------HHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHH
Q 024907 131 NRPSVWAIQGLPVMTLA-------------------SFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDK 191 (260)
Q Consensus 131 ~~Ptl~i~EGv~Yl~~~-------------------~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~ 191 (260)
..--++++- .+|.... ....+++.+.++..||+.+++-.+... .......+
T Consensus 122 ~~fD~I~~n-pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~~ 191 (230)
T 3evz_A 122 GTFDVIFSA-PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------KLLNVIKE 191 (230)
T ss_dssp SCEEEEEEC-CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------HHHHHHHH
T ss_pred CceeEEEEC-CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------hHHHHHHH
Confidence 222344432 2354322 247788888888889988877543210 11122446
Q ss_pred HHHhCCceeee
Q 024907 192 LFMSNGFGVGM 202 (260)
Q Consensus 192 ~~~~~Gw~~~~ 202 (260)
++..+||.++.
T Consensus 192 ~l~~~g~~~~~ 202 (230)
T 3evz_A 192 RGIKLGYSVKD 202 (230)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCceEE
Confidence 78899998754
No 133
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=59.67 E-value=70 Score=26.89 Aligned_cols=134 Identities=7% Similarity=-0.053 Sum_probs=75.1
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeChH-HHHHHHHHHHhh---------cCC-----CCCCceeEEeccCCCchHH
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEG---------VGA-----KIPRSCLFLHVPLESSNIQ 120 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P-~v~~~K~~~l~~---------~~~-----~~p~~~~~v~vd~~~~dw~ 120 (260)
..|+.+|||-=.-...|... +..++=||.- .+++.-++.... .+. ....+++++..|+.. +.
T Consensus 70 ~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~--l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD--LP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT--GG
T ss_pred CeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc--CC
Confidence 57999999976655555322 5688999985 444432222210 000 001367888888863 21
Q ss_pred HHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE---EeCChhhhhhhcCCCcchhHHHHHHHHhC
Q 024907 121 QALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL---GELPAWLAETEFGNKSTTEKWMDKLFMSN 196 (260)
Q Consensus 121 ~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~---~d~~~~~~~~~~~~~~~~~~w~~~~~~~~ 196 (260)
. . +.+.=-+|+.-++ .+++++....+++.+.++..||+.++ +.+...... ..++. .+...+.++|..
T Consensus 147 ~--~----~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~-g~~~~-~~~~el~~~l~~- 217 (252)
T 2gb4_A 147 R--A----NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA-GPPFY-VPSAELKRLFGT- 217 (252)
T ss_dssp G--G----CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCC-CSSCC-CCHHHHHHHHTT-
T ss_pred c--c----cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCC-CCCCC-CCHHHHHHHhhC-
Confidence 0 0 1112236666677 57888777889999999888988764 333321000 01111 223345567766
Q ss_pred Cceee
Q 024907 197 GFGVG 201 (260)
Q Consensus 197 Gw~~~ 201 (260)
+|.+.
T Consensus 218 ~f~v~ 222 (252)
T 2gb4_A 218 KCSMQ 222 (252)
T ss_dssp TEEEE
T ss_pred CeEEE
Confidence 69863
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=58.37 E-value=50 Score=27.61 Aligned_cols=130 Identities=15% Similarity=0.058 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhhccCCcceEEEeCCCCCCcccccC-CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCC
Q 024907 38 TKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLES 116 (260)
Q Consensus 38 tr~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~ 116 (260)
|+.+-+.+.+.+. + ...|+-+|||.=.-...+. ....+.-+|+|...+-..|+ ..+..+. ..+++..|+
T Consensus 107 t~~~~~~l~~~~~--~-~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~-n~~~~~~----~v~~~~~d~-- 176 (254)
T 2nxc_A 107 TRLALKALARHLR--P-GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA-NAKRNGV----RPRFLEGSL-- 176 (254)
T ss_dssp HHHHHHHHHHHCC--T-TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH-HHHHTTC----CCEEEESCH--
T ss_pred HHHHHHHHHHhcC--C-CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH-HHHHcCC----cEEEEECCh--
Confidence 3444455555543 3 3589999999855443332 22244455555544433333 3333321 144544443
Q ss_pred chHHHHHHhcCCCCCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEe-CChhhhhhhcCCCcchhHHHHHHHHh
Q 024907 117 SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE-LPAWLAETEFGNKSTTEKWMDKLFMS 195 (260)
Q Consensus 117 ~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d-~~~~~~~~~~~~~~~~~~w~~~~~~~ 195 (260)
.+.+.. ...-++++-.+ .+....++..+.++..||+.+++. .... ......+.+..
T Consensus 177 ---~~~~~~-----~~fD~Vv~n~~----~~~~~~~l~~~~~~LkpgG~lils~~~~~-----------~~~~v~~~l~~ 233 (254)
T 2nxc_A 177 ---EAALPF-----GPFDLLVANLY----AELHAALAPRYREALVPGGRALLTGILKD-----------RAPLVREAMAG 233 (254)
T ss_dssp ---HHHGGG-----CCEEEEEEECC----HHHHHHHHHHHHHHEEEEEEEEEEEEEGG-----------GHHHHHHHHHH
T ss_pred ---hhcCcC-----CCCCEEEECCc----HHHHHHHHHHHHHHcCCCCEEEEEeeccC-----------CHHHHHHHHHH
Confidence 332322 22345555332 345678888888888888887764 2210 12234567889
Q ss_pred CCcee
Q 024907 196 NGFGV 200 (260)
Q Consensus 196 ~Gw~~ 200 (260)
+||.+
T Consensus 234 ~Gf~~ 238 (254)
T 2nxc_A 234 AGFRP 238 (254)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 99986
No 135
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=57.26 E-value=69 Score=25.20 Aligned_cols=103 Identities=14% Similarity=0.118 Sum_probs=59.7
Q ss_pred HHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCc-EEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchH
Q 024907 42 DDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTST-IIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNI 119 (260)
Q Consensus 42 Dd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~-~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw 119 (260)
.+.+.+.+. ....|+-+|||.=.-...+ +. +++=+|. |++++.-++.+ .+.+++..|+..-.
T Consensus 27 ~~~l~~~~~---~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~- 90 (211)
T 2gs9_A 27 ERALKGLLP---PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALP- 90 (211)
T ss_dssp HHHHHTTCC---CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCC-
T ss_pred HHHHHHhcC---CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCC-
Confidence 344544432 2358999999966544444 23 5666666 34444322222 15677777765211
Q ss_pred HHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 120 QQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 120 ~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
+..+.--++++-.+ .+++ +...+++.+.+...||+.+++..
T Consensus 91 --------~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 91 --------FPGESFDVVLLFTTLEFVE--DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --------SCSSCEEEEEEESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCcEEEEEEcChhhhcC--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 22223345666666 4665 34578888888888888877654
No 136
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=55.38 E-value=91 Score=26.04 Aligned_cols=119 Identities=13% Similarity=0.145 Sum_probs=70.6
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-+|||.=.-...+ ..| +.+++=+|. |+.++.-++.....+. .+++++..|+.. . +. .+.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~-~----~~-----~~~ 176 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFS-A----LA-----GQQ 176 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTG-G----GT-----TCC
T ss_pred CEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhh-h----cc-----cCC
Confidence 57999999976655444 234 466777777 5555554444444432 257788777652 1 11 122
Q ss_pred CeEEEEccCCCCCH-------------------------HHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhH
Q 024907 133 PSVWAIQGLPVMTL-------------------------ASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEK 187 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~-------------------------~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~ 187 (260)
--++++- .+|... +....+++.+.++..||+.++++.... ...
T Consensus 177 fD~Iv~n-pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~ 244 (276)
T 2b3t_A 177 FAMIVSN-PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-----------QGE 244 (276)
T ss_dssp EEEEEEC-CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-----------CHH
T ss_pred ccEEEEC-CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-----------HHH
Confidence 2355542 123221 456788888888888999999885421 111
Q ss_pred HHHHHHHhCCcee
Q 024907 188 WMDKLFMSNGFGV 200 (260)
Q Consensus 188 w~~~~~~~~Gw~~ 200 (260)
-..+++..+||..
T Consensus 245 ~~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 245 AVRQAFILAGYHD 257 (276)
T ss_dssp HHHHHHHHTTCTT
T ss_pred HHHHHHHHCCCcE
Confidence 2456788899973
No 137
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=54.78 E-value=79 Score=25.21 Aligned_cols=121 Identities=11% Similarity=-0.038 Sum_probs=65.8
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
...|+-+|||.=.-...+... .-+|++...+-..|.. +.+++..|+.... +..+.--
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~---~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~---------~~~~~fD 104 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK---IGVEPSERMAEIARKR-----------GVFVLKGTAENLP---------LKDESFD 104 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC---EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC---------SCTTCEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH---hccCCCHHHHHHHHhc-----------CCEEEEcccccCC---------CCCCCee
Confidence 457999999976655555322 4455554433222221 3567777765211 2222334
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh---hhhhhh----c--C----CCcchhHHHHHHHHhCCcee
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA---WLAETE----F--G----NKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~---~~~~~~----~--~----~~~~~~~w~~~~~~~~Gw~~ 200 (260)
++++-++ .+++. ...+++.+.+...||+.+++..+. ...... . . ....+..-+.++|..+||.+
T Consensus 105 ~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 105 FALMVTTICFVDD--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp EEEEESCGGGSSC--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred EEEEcchHhhccC--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 6666666 46642 356888888888888887765321 111110 0 0 11122233468899999996
No 138
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=53.03 E-value=71 Score=27.35 Aligned_cols=102 Identities=14% Similarity=0.006 Sum_probs=54.6
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-||||.=.-+..|... +..+.=||. |++++.-++.++.. .......+++.. ....+ ...||
T Consensus 46 g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~-~~~~~-~~~fD---- 112 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAE-IPKEL-AGHFD---- 112 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSC-CCGGG-TTCCS----
T ss_pred cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccc-ccccc-CCCcc----
Confidence 358999999975544444222 345666666 44555433333221 111111122210 00011 11233
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.++....+.++..++...+++.+.++. ||+.+++.+
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 444444446788888888999999888 888887664
No 139
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=52.46 E-value=29 Score=26.70 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=55.4
Q ss_pred cceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..+ ..+++=||. |++++.-++.+...+. +.+++++..|+. ++...+.. ....
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~--~~~~~~~~---~~~~ 116 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE--PEKFEVRKMDAN--RALEQFYE---EKLQ 116 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHHHHHHH---TTCC
T ss_pred CCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC--CcceEEEECcHH--HHHHHHHh---cCCC
Confidence 357999999965543333 222 234555555 5555544444444431 226778877764 33333321 1223
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHH--HhccCCCcEEEEeCC
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLV--GSLAMNKCLFLGELP 171 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i--~~~~a~gs~l~~d~~ 171 (260)
--++++-.. |.. ......++.+ .++..||+.+++..+
T Consensus 117 fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 117 FDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 346665444 431 1223344445 455568888887754
No 140
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=52.26 E-value=58 Score=24.91 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=57.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+.......++-||. |++++.-++.++..+. +.+++++..|+. ++ +.. ++ +.-
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~--~~---~~~--~~-~~f 101 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLLKMEAE--RA---IDC--LT-GRF 101 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEECSCHH--HH---HHH--BC-SCE
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcHH--Hh---HHh--hc-CCC
Confidence 3589999999765544442112346677776 5555554444444321 225666666543 22 221 11 123
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHH--hccCCCcEEEEeCC
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVG--SLAMNKCLFLGELP 171 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~--~~~a~gs~l~~d~~ 171 (260)
-++++-.. |. ......+++.+. +...||+.+++...
T Consensus 102 D~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 102 DLVFLDPP-YA-KETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EEEEECCS-SH-HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCC-CC-cchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 45555443 42 244456666675 55678888887753
No 141
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=51.28 E-value=35 Score=30.49 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=64.3
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhc-----CCCCCCceeEEeccCCCchHHHHHHhcC
Q 024907 56 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGV-----GAKIPRSCLFLHVPLESSNIQQALRAKG 127 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~-----~~~~p~~~~~v~vd~~~~dw~~~L~~~G 127 (260)
..|+-+|||.=.-...+. .+.+..++=||. |+.++.-++.++.. +...+.+++++..|+.... .+...+
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~---~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA---TAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG---GCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh---hcccCC
Confidence 579999999765444442 212457777777 55555544444322 2111237889998886311 011113
Q ss_pred CCCCCCeEEEEccCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 024907 128 FNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 128 fd~~~Ptl~i~EGv~-Yl~~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
+..+.--++++-+++ +++. ...+|+.+.+...||+.+++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEE
Confidence 433444577777774 5543 467888888888898887653
No 142
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=49.77 E-value=69 Score=26.16 Aligned_cols=105 Identities=10% Similarity=-0.015 Sum_probs=58.6
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..| +..++=||. ++.++.-++.+...+ ..+++++..|+. ++.... +..+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~--~~l~~~----~~~~ 104 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAV--EVLHKM----IPDN 104 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHH--HHHHHH----SCTT
T ss_pred CCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHH--HHHHHH----cCCC
Confidence 357999999987765555 244 566777776 344444334444433 136778777764 322221 2222
Q ss_pred CCeEEEEccC-CCCCHHHHH------HHHHHHHhccCCCcEEEEe
Q 024907 132 RPSVWAIQGL-PVMTLASFE------DVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~------~ll~~i~~~~a~gs~l~~d 169 (260)
.-..+++-.. +|....... .+++.+.+...||+.+.+.
T Consensus 105 ~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 105 SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 2233333322 444333222 4888888877888887664
No 143
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=48.29 E-value=27 Score=28.55 Aligned_cols=95 Identities=12% Similarity=0.091 Sum_probs=54.4
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=.-...+ ..| +..++-+|. |++++.-++. . .+++++..|+.. +. ....|
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~---~-----~~~~~~~~d~~~--~~---~~~~f--- 96 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR---L-----PNTNFGKADLAT--WK---PAQKA--- 96 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH---S-----TTSEEEECCTTT--CC---CSSCE---
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh---C-----CCcEEEECChhh--cC---ccCCc---
Confidence 357999999965433333 223 344555555 3444332222 1 267888888762 21 11223
Q ss_pred CCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 132 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
-++++-.+ .+++ +...+++.+.+...||+.+++..
T Consensus 97 --D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 97 --DLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp --EEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEE
T ss_pred --CEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEe
Confidence 35555555 4663 34678889988888998877654
No 144
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=47.95 E-value=53 Score=25.21 Aligned_cols=116 Identities=9% Similarity=0.014 Sum_probs=62.0
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeChH-HHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P-~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+.+|||. + . ||.- ++++.-++... .+.+++..|+.. +. ..++..+.--
T Consensus 14 ~~vL~~~~g~------------v--~-vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~--~~----~~~~~~~~fD 65 (176)
T 2ld4_A 14 QFVAVVWDKS------------S--P-VEALKGLVDKLQALTG-------NEGRVSVENIKQ--LL----QSAHKESSFD 65 (176)
T ss_dssp SEEEEEECTT------------S--C-HHHHHHHHHHHHHHTT-------TTSEEEEEEGGG--GG----GGCCCSSCEE
T ss_pred CEEEEecCCc------------e--e-eeCCHHHHHHHHHhcc-------cCcEEEEechhc--Cc----cccCCCCCEe
Confidence 5788899984 1 1 7764 44443333221 146777777752 21 1122233334
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCceeee
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGM 202 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~~ 202 (260)
++++-.+ .|++++ ...+++.+.+...||+.+++..+.... ........+.....++|..+|| +++
T Consensus 66 ~V~~~~~l~~~~~~-~~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 66 IILSGLVPGSTTLH-SAEILAEIARILRPGGCLFLKEPVETA-VDNNSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp EEEECCSTTCCCCC-CHHHHHHHHHHEEEEEEEEEEEEEESS-SCSSSSSCCHHHHHHHHHHTTC-EEE
T ss_pred EEEECChhhhcccC-HHHHHHHHHHHCCCCEEEEEEcccccc-cccccccCCHHHHHHHHHHCCC-cEe
Confidence 5666445 577222 367888999888899988875331000 0000111112223477899999 653
No 145
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=47.38 E-value=54 Score=28.45 Aligned_cols=108 Identities=10% Similarity=0.037 Sum_probs=53.4
Q ss_pred CCcceEEEeCCCCCCccccc-CCC--CCcEEEEeChHHHHHHHHHHHhhcC--CCCCCceeEEeccCCCchHHHHHHhcC
Q 024907 53 DGLKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGVG--AKIPRSCLFLHVPLESSNIQQALRAKG 127 (260)
Q Consensus 53 ~g~~QVV~LGaGlDTR~~Rl-~~~--~~~~~~EvD~P~v~~~K~~~l~~~~--~~~p~~~~~v~vd~~~~dw~~~L~~~G 127 (260)
+....|+.||||-=.-+..+ ..+ ..++.+|+|. ++++.-++.++... .-...+++++..|.. ++...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~-~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~----- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQ----- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT-THHHHHHHHCHHHHSSCTTCTTCCEECSCSC--C---C-----
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHhhhhcccccccCCceEEEEChHH--HHHhh-----
Confidence 34568999999976544333 222 2456666665 45555445554321 001126777777754 22211
Q ss_pred CCCCCCeEEEEccC-CCCCHHHH--HHHHHHHHhccCCCcEEEEe
Q 024907 128 FNGNRPSVWAIQGL-PVMTLASF--EDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 128 fd~~~Ptl~i~EGv-~Yl~~~~~--~~ll~~i~~~~a~gs~l~~d 169 (260)
..+.--+|++-.. .+.+.... ..+++.+.+...||+.++..
T Consensus 154 -~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 154 -TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred -cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 1122235555443 23222222 55777777777788777764
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=46.47 E-value=81 Score=26.36 Aligned_cols=125 Identities=12% Similarity=0.064 Sum_probs=66.7
Q ss_pred HHHHHHHHhhccCCcceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhh---cCCCCCCceeEEeccC
Q 024907 41 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEG---VGAKIPRSCLFLHVPL 114 (260)
Q Consensus 41 iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~---~~~~~p~~~~~v~vd~ 114 (260)
.|..+............|+-||||-=.-..-+ ..| +..++=||. |++++.-++.+.. .+ ...+++++..|+
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~ 99 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADV 99 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCT
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCH
Confidence 66665443322223457999999976644443 233 345555555 4444443444433 22 123578888888
Q ss_pred CCchHHHHHHhcCCCCCCCeEEEEccCCCCCH------------------HHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 115 ESSNIQQALRAKGFNGNRPSVWAIQGLPVMTL------------------ASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 115 ~~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Yl~~------------------~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
.. +.......++....--++++- -+|+.. .....+++.+.++..||+.+++-++
T Consensus 100 ~~--~~~~~~~~~~~~~~fD~Vv~n-PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 100 TL--RAKARVEAGLPDEHFHHVIMN-PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TC--CHHHHHHTTCCTTCEEEEEEC-CCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HH--HhhhhhhhccCCCCcCEEEEC-CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 63 322222223433344455553 235432 1256788888888888888887654
No 147
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=45.75 E-value=1.1e+02 Score=24.10 Aligned_cols=106 Identities=10% Similarity=-0.001 Sum_probs=60.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
...|+-+|||.=.-...+. ..+.-+|++.. +.+++..|+.... +..+.--
T Consensus 68 ~~~vLDiG~G~G~~~~~l~--~~v~~~D~s~~-------------------~~~~~~~d~~~~~---------~~~~~fD 117 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR--NPVHCFDLASL-------------------DPRVTVCDMAQVP---------LEDESVD 117 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC--SCEEEEESSCS-------------------STTEEESCTTSCS---------CCTTCEE
T ss_pred CCeEEEECCcCCHHHHHhh--ccEEEEeCCCC-------------------CceEEEeccccCC---------CCCCCEe
Confidence 3579999999766555542 23444444333 2446666665211 2222334
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEE-eCChhhhhhhcCCCcchhHHHHHHHHhCCceee
Q 024907 135 VWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 201 (260)
Q Consensus 135 l~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~-d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~~ 201 (260)
++++-.++.. .+...+++.+.+...||+.+++ +..... .....+.+++..+||.+.
T Consensus 118 ~v~~~~~l~~--~~~~~~l~~~~~~L~~gG~l~i~~~~~~~---------~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 118 VAVFCLSLMG--TNIRDFLEEANRVLKPGGLLKVAEVSSRF---------EDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp EEEEESCCCS--SCHHHHHHHHHHHEEEEEEEEEEECGGGC---------SCHHHHHHHHHHTTEEEE
T ss_pred EEEEehhccc--cCHHHHHHHHHHhCCCCeEEEEEEcCCCC---------CCHHHHHHHHHHCCCEEE
Confidence 5665555332 3456788888888788887665 443210 122234577899999963
No 148
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=45.66 E-value=62 Score=23.04 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=41.1
Q ss_pred cEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCC-chHHHHHHh-c-CCCCCCCeEEEEccC-C-CCCHHHHHH
Q 024907 78 TIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES-SNIQQALRA-K-GFNGNRPSVWAIQGL-P-VMTLASFED 151 (260)
Q Consensus 78 ~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~-~dw~~~L~~-~-Gfd~~~Ptl~i~EGv-~-Yl~~~~~~~ 151 (260)
+++|--.- |--.+. +++|.+.+ ..|..+|++. .+..+.+.+ + | ..+.|++||-.|- + -++.+++.+
T Consensus 6 I~vYs~~~Cp~C~~a-K~~L~~~g------i~y~~idi~~d~~~~~~~~~~~~G-~~tVP~I~i~Dg~~l~~~~~~el~~ 77 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRL-KTALTANR------IAYDEVDIEHNRAAAEFVGSVNGG-NRTVPTVKFADGSTLTNPSADEVKA 77 (92)
T ss_dssp EEEEECTTCSSHHHH-HHHHHHTT------CCCEEEETTTCHHHHHHHHHHSSS-SSCSCEEEETTSCEEESCCHHHHHH
T ss_pred EEEEcCCCCHhHHHH-HHHHHhcC------CceEEEEcCCCHHHHHHHHHHcCC-CCEeCEEEEeCCEEEeCCCHHHHHH
Confidence 44444433 333333 34566653 3345555542 333444443 2 4 4579999998875 3 367777777
Q ss_pred HHHHHHhc
Q 024907 152 VLLLVGSL 159 (260)
Q Consensus 152 ll~~i~~~ 159 (260)
-|..+..+
T Consensus 78 ~L~el~gL 85 (92)
T 2lqo_A 78 KLVKIAGL 85 (92)
T ss_dssp HHHHHHCC
T ss_pred HHHHhcCC
Confidence 66666544
No 149
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=45.55 E-value=1e+02 Score=23.83 Aligned_cols=103 Identities=11% Similarity=0.008 Sum_probs=58.3
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-+|||.=.-...+. .....+++=||. |+.++.-++.+...+. ..+++++..|+. ++... .++.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~------~~~~ 93 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL--IDRVTLIKDGHQ--NMDKY------IDCP 93 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC--GGGEEEECSCGG--GGGGT------CCSC
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHH--HHhhh------ccCC
Confidence 479999999865444441 112346777776 4555555555555432 136788888864 22111 1122
Q ss_pred CeEEEEccCCCCC---------HHHHHHHHHHHHhccCCCcEEEEe
Q 024907 133 PSVWAIQGLPVMT---------LASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 133 Ptl~i~EGv~Yl~---------~~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
--++++-. .|++ ++....+++.+.++..||+.+++-
T Consensus 94 fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 94 VKAVMFNL-GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp EEEEEEEE-SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcC-CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 23444332 2433 345566888888887888877654
No 150
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=44.85 E-value=98 Score=23.32 Aligned_cols=99 Identities=10% Similarity=-0.011 Sum_probs=55.7
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+.+|||.=.-...+ ..| +.+++=+|. |+.++.-++.+...+. +.+. .+..|.. +. +... ..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~-~~----~~~~---~~ 93 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAP-RA----FDDV---PD 93 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTT-GG----GGGC---CS
T ss_pred CCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchH-hh----hhcc---CC
Confidence 358999999975444433 223 567777787 4555555555555432 2255 6665543 12 2220 02
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
..-++++-+..+. ..+++.+.+...||+.+++..
T Consensus 94 ~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 94 NPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp CCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEE
T ss_pred CCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 2335555444322 557777888778888887764
No 151
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=43.53 E-value=75 Score=28.54 Aligned_cols=102 Identities=12% Similarity=-0.060 Sum_probs=58.1
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-||||.=.-...+ ..| +.+++=||. |..++.-++.+...+.....+++++..|+.. . +....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~---------~~~~~ 292 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G---------VEPFR 292 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T---------CCTTC
T ss_pred CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c---------CCCCC
Confidence 57999999987755554 233 455565555 4444444444444332111146778887753 1 22334
Q ss_pred CeEEEEccCCC----CCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 133 PSVWAIQGLPV----MTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 133 Ptl~i~EGv~Y----l~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
.-+|++-..++ +.......+++.+.+...||+.+++
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 45666654422 2334456788889887778887765
No 152
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=42.96 E-value=76 Score=26.15 Aligned_cols=110 Identities=12% Similarity=0.108 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhhccCCcceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCc
Q 024907 39 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 117 (260)
Q Consensus 39 r~iDd~l~~~~~~~~g~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~ 117 (260)
..+.+++.+.+. ....|+-+|||.=.-...+... +..++=||. |++++.-++... .+ ++..|+..-
T Consensus 42 ~~~~~~l~~~~~---~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-------~~--~~~~d~~~~ 108 (260)
T 2avn_A 42 RLIGSFLEEYLK---NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-------KN--VVEAKAEDL 108 (260)
T ss_dssp HHHHHHHHHHCC---SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-------SC--EEECCTTSC
T ss_pred HHHHHHHHHhcC---CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-------CC--EEECcHHHC
Confidence 344555655543 2357999999975544444222 345666666 444443222211 12 666666521
Q ss_pred hHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 118 NIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 118 dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
. +..+.--++++-++ ..+.++ ...+|+.+.+...||+.+++..+
T Consensus 109 ~---------~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 109 P---------FPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp C---------SCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---------CCCCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeC
Confidence 1 11222235666554 333333 67788889988889998887654
No 153
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=41.41 E-value=31 Score=30.01 Aligned_cols=107 Identities=11% Similarity=0.030 Sum_probs=53.5
Q ss_pred cceEEEeCCCCCCccccc-CCC--CCcEEEEeChHHHHHHHHHHHhhc--CCCCCCceeEEeccCCCchHHHHHHhcCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGV--GAKIPRSCLFLHVPLESSNIQQALRAKGFN 129 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl-~~~--~~~~~~EvD~P~v~~~K~~~l~~~--~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd 129 (260)
...|+.+|||-=.-...+ ..+ ..+..+|+|.. +++.-++.++.. ... ..+++++..|.. ++ +... .
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~-~i~~a~~~~~~~~~~~~-~~~v~~~~~D~~--~~---~~~~--~ 166 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGE-VMEQSKQHFPQISRSLA-DPRATVRVGDGL--AF---VRQT--P 166 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHH-HHHHHHHHCHHHHGGGG-CTTEEEEESCHH--HH---HHSS--C
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHhHHhhcccC-CCcEEEEECcHH--HH---HHhc--c
Confidence 468999999966544433 222 24666666654 444433344211 111 126777776653 22 2210 0
Q ss_pred CCCCeEEEEccCC-CCCHHHH--HHHHHHHHhccCCCcEEEEeC
Q 024907 130 GNRPSVWAIQGLP-VMTLASF--EDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 130 ~~~Ptl~i~EGv~-Yl~~~~~--~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.+.=-+|++-... ..+.... .++++.+.+...||+.+++..
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 1222355554432 2222222 567888888878888887753
No 154
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=40.65 E-value=91 Score=25.70 Aligned_cols=124 Identities=10% Similarity=0.073 Sum_probs=69.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
...|+-+|||.=.-...+..+ +.+++-||....+ +...... + +++++..|+.. +. +....| -
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~------~~~a~~~-~-~~~~~~~d~~~--~~--~~~~~f-----D 96 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVM------RQQAVVH-P-QVEWFTGYAEN--LA--LPDKSV-----D 96 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHH------HHSSCCC-T-TEEEECCCTTS--CC--SCTTCB-----S
T ss_pred CCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHH------HHHHHhc-c-CCEEEECchhh--CC--CCCCCE-----e
Confidence 468999999987666555444 5788888885422 1211111 2 67888888753 21 111223 3
Q ss_pred EEEEccC-CCCCHHHHHHHHHHHHhccCCCc-EEEEeCCh------hhhhhh------cCCCcchhHHHHHHHHhCCcee
Q 024907 135 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKC-LFLGELPA------WLAETE------FGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 135 l~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs-~l~~d~~~------~~~~~~------~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
++++-.+ .++ .+...+++.+.+... |+ .++.+... |..... .........++. +|.++||..
T Consensus 97 ~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~ 172 (261)
T 3ege_A 97 GVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRR 172 (261)
T ss_dssp EEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSE
T ss_pred EEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCc
Confidence 5555555 456 334677888888777 76 55556432 111110 001112334455 899999974
No 155
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=39.17 E-value=34 Score=30.42 Aligned_cols=107 Identities=9% Similarity=0.046 Sum_probs=55.0
Q ss_pred CcceEEEeCCCCCCccccc-CC-C-CCcEEEEeChHHHHHHHHHHHhhc--CCCCCCceeEEeccCCCchHHHHHHhcCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL-NW-P-TSTIIFDISPERIFKISAEKLEGV--GAKIPRSCLFLHVPLESSNIQQALRAKGF 128 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl-~~-~-~~~~~~EvD~P~v~~~K~~~l~~~--~~~~p~~~~~v~vd~~~~dw~~~L~~~Gf 128 (260)
....|+.||||-=.-...+ .. + ..+..+|+|.. +++.-++.++.. +.. ..+++++..|.. ++ |.. +
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~-~l~~Ar~~~~~~~~gl~-~~rv~~~~~D~~--~~---l~~--~ 190 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKM-VVDVSKQFFPDVAIGYE-DPRVNLVIGDGV--AF---LKN--A 190 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHH-HHHHHHHHCHHHHGGGG-STTEEEEESCHH--HH---HHT--S
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHH-HHHHHHHHHHhhccccC-CCcEEEEECCHH--HH---HHh--c
Confidence 3468999999965544433 22 2 24555666654 444433444321 111 125777766643 22 321 1
Q ss_pred CCCCCeEEEEccC-CCCCHHH--HHHHHHHHHhccCCCcEEEEe
Q 024907 129 NGNRPSVWAIQGL-PVMTLAS--FEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 129 d~~~Ptl~i~EGv-~Yl~~~~--~~~ll~~i~~~~a~gs~l~~d 169 (260)
..+.=-+|++-.. ..-..+. ...+++.+.++..||+.++++
T Consensus 191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 1112235555443 2211121 356788888877888888886
No 156
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=39.07 E-value=75 Score=25.69 Aligned_cols=131 Identities=9% Similarity=-0.052 Sum_probs=69.0
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeChH-HHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 131 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~P-~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~ 131 (260)
...|+-+|||.=+-...+. .+.+.+++=||.. .+++.-.+..+.. .+++++..|+..... +. +...
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~---~~---~~~~ 146 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHK---YR---MLIA 146 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGG---GG---GGCC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhh---hc---ccCC
Confidence 3579999999866555542 1123567777773 3333222222222 268888888764221 11 1122
Q ss_pred CCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 132 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 132 ~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
..-++++-.. .++....++..+.+...||+.++++................... .++|.++||.+
T Consensus 147 ~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~ 211 (233)
T 2ipx_A 147 MVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKP 211 (233)
T ss_dssp CEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEE
T ss_pred cEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCce
Confidence 3345665332 45555667777777777898888865431110000000000111 36778999986
No 157
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=35.21 E-value=65 Score=27.46 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=55.2
Q ss_pred CcceEEEeCCCCCCccccc-CCC-CCcEEEEeChHHHHHHHHHHHhhcC-CC-------CCCceeEEeccCCCchHHHHH
Q 024907 54 GLKQVVLLTDGMDTRPYRL-NWP-TSTIIFDISPERIFKISAEKLEGVG-AK-------IPRSCLFLHVPLESSNIQQAL 123 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl-~~~-~~~~~~EvD~P~v~~~K~~~l~~~~-~~-------~p~~~~~v~vd~~~~dw~~~L 123 (260)
....|+.||||-=.-...+ ..+ ..+..+|+|..-+-..|+ .+ ... .. ...+++++..|.. ++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~-~~-~~~~~l~~~~~~~~~~~v~~~~~D~~--~~l~~- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKD-LI-KIDNGLLEAMLNGKHEKAKLTIGDGF--EFIKN- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHH-HT-CTTTTHHHHHHTTCCSSEEEEESCHH--HHHHH-
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HH-hhccccccccccCCCCcEEEEECchH--HHhcc-
Confidence 3468999999976543333 223 256677777654433343 33 220 00 1236777776643 33322
Q ss_pred HhcCCCCCCCeEEEEccCCCC-CHHH--HHHHHHHHHhccCCCcEEEEeC
Q 024907 124 RAKGFNGNRPSVWAIQGLPVM-TLAS--FEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 124 ~~~Gfd~~~Ptl~i~EGv~Yl-~~~~--~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
...| -++++-..... +... ...+++.+.+...||+.+++..
T Consensus 150 -~~~f-----D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGF-----DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCE-----EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCe-----eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 2223 35555443111 1122 2567788888778888888763
No 158
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=34.15 E-value=1.7e+02 Score=23.00 Aligned_cols=130 Identities=18% Similarity=0.277 Sum_probs=68.2
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChH-HHHHH-HHH---HHhhcCCCCCCceeEEeccCCCchHHHHHHhcC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPE-RIFKI-SAE---KLEGVGAKIPRSCLFLHVPLESSNIQQALRAKG 127 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P-~v~~~-K~~---~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~G 127 (260)
...|+-+|||.=.-...+ ..| +.+++=||.- ++++. .+. .....+ . .+++++..|+.. +.
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~--~-~~v~~~~~d~~~--l~------- 94 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGG--L-PNLLYLWATAER--LP------- 94 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTC--C-TTEEEEECCSTT--CC-------
T ss_pred CCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcC--C-CceEEEecchhh--CC-------
Confidence 357999999987655555 233 5677777774 33332 111 111211 1 268888888763 11
Q ss_pred CCCCCCeEEEEccCC-CCCH--HHH---HHHHHHHHhccCCCcEEEEeCC--hhhhhhh--cCCCcchh----HHHHHHH
Q 024907 128 FNGNRPSVWAIQGLP-VMTL--ASF---EDVLLLVGSLAMNKCLFLGELP--AWLAETE--FGNKSTTE----KWMDKLF 193 (260)
Q Consensus 128 fd~~~Ptl~i~EGv~-Yl~~--~~~---~~ll~~i~~~~a~gs~l~~d~~--~~~~~~~--~~~~~~~~----~w~~~~~ 193 (260)
+..+. -.+. .++ +... ..+ ..+++.+.+...||+.+++.+. .+..... ........ .++.+.+
T Consensus 95 ~~~~~-d~v~--~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (218)
T 3mq2_A 95 PLSGV-GELH--VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRY 171 (218)
T ss_dssp SCCCE-EEEE--EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHH
T ss_pred CCCCC-CEEE--EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHH
Confidence 21122 2232 111 2111 011 6788888888889998887642 1111100 11111122 2245688
Q ss_pred HhCCcee
Q 024907 194 MSNGFGV 200 (260)
Q Consensus 194 ~~~Gw~~ 200 (260)
.+.||++
T Consensus 172 ~~aGf~i 178 (218)
T 3mq2_A 172 AEAGWKL 178 (218)
T ss_dssp HHTTEEE
T ss_pred HHcCCCc
Confidence 9999997
No 159
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=32.63 E-value=95 Score=25.40 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhccCCCcEEEE
Q 024907 147 ASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 147 ~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
+....+++.+.++..||+.+++
T Consensus 191 ~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 191 QPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEE
T ss_pred cHHHHHHHHHHHhcCCCcEEEE
Confidence 5567889999888889888776
No 160
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=31.92 E-value=72 Score=25.12 Aligned_cols=97 Identities=9% Similarity=0.035 Sum_probs=53.6
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++=+|. |+.++.-++.++..+. .+.+++..|+.. .+.. ...|
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~-~~~~---~~~~----- 144 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDL---HNVSTRHGDGWQ-GWQA---RAPF----- 144 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGG-CCGG---GCCE-----
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC---CceEEEECCccc-CCcc---CCCc-----
Confidence 357999999954333333111 344555554 5555555555555432 257788877652 1111 1223
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCCh
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA 172 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~ 172 (260)
-++++-++ .+++.+ +.++..||+.+++..+.
T Consensus 145 D~i~~~~~~~~~~~~--------~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPPEIPTA--------LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCSSCCTH--------HHHTEEEEEEEEEEECS
T ss_pred cEEEEccchhhhhHH--------HHHhcccCcEEEEEEcC
Confidence 46666665 566642 34455688888877653
No 161
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=31.63 E-value=2.2e+02 Score=23.41 Aligned_cols=109 Identities=8% Similarity=-0.102 Sum_probs=56.5
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCC-------------chHHH
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLES-------------SNIQQ 121 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~-------------~dw~~ 121 (260)
.+.|+-+|+|+.|-.+-......+.-+|.|-. ..+.-++.+++.+.....+.+++..|+.. +.|.+
T Consensus 31 a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~-~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~ 109 (202)
T 3cvo_A 31 AEVILEYGSGGSTVVAAELPGKHVTSVESDRA-WARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPD 109 (202)
T ss_dssp CSEEEEESCSHHHHHHHTSTTCEEEEEESCHH-HHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTH
T ss_pred CCEEEEECchHHHHHHHHcCCCEEEEEeCCHH-HHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHH
Confidence 46899999999885443211234555555543 33443555666542112467888887542 11322
Q ss_pred HHHhc-CCC-CCCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 122 ALRAK-GFN-GNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 122 ~L~~~-Gfd-~~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
-.... ..+ ....=+++..|=.. +.-+...+ .+..+|+.|++|-
T Consensus 110 ~~~~i~~~~~~~~fDlIfIDg~k~-----~~~~~~~l-~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 110 YPLAVWRTEGFRHPDVVLVDGRFR-----VGCALATA-FSITRPVTLLFDD 154 (202)
T ss_dssp HHHGGGGCTTCCCCSEEEECSSSH-----HHHHHHHH-HHCSSCEEEEETT
T ss_pred HhhhhhccccCCCCCEEEEeCCCc-----hhHHHHHH-HhcCCCeEEEEeC
Confidence 21110 011 12345788788411 12222233 4456899999984
No 162
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=31.19 E-value=1.3e+02 Score=24.61 Aligned_cols=131 Identities=22% Similarity=0.225 Sum_probs=66.8
Q ss_pred cceEEEeCCCCCCcccccC--CCCCcEEEEeChH--HHHHHH---HHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcC
Q 024907 55 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPE--RIFKIS---AEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKG 127 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~P--~v~~~K---~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~G 127 (260)
...|+-+|||-=.-...|. .+ +..++=||.- .+++.- ++.....+ . .+..++..|... +...
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~--~-~~v~~~~~d~~~--l~~~----- 93 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGG--L-SNVVFVIAAAES--LPFE----- 93 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTC--C-SSEEEECCBTTB--CCGG-----
T ss_pred CCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcC--C-CCeEEEEcCHHH--hhhh-----
Confidence 3579999999766666663 44 5778777774 444431 22222222 1 267788877752 2111
Q ss_pred CCCCCCeEEEEccCCCCCHHH-------HHHHHHHHHhccCCCcEEEE--eCChhhhhhh---cCCCcchhHH-----HH
Q 024907 128 FNGNRPSVWAIQGLPVMTLAS-------FEDVLLLVGSLAMNKCLFLG--ELPAWLAETE---FGNKSTTEKW-----MD 190 (260)
Q Consensus 128 fd~~~Ptl~i~EGv~Yl~~~~-------~~~ll~~i~~~~a~gs~l~~--d~~~~~~~~~---~~~~~~~~~w-----~~ 190 (260)
+. + .+..+... |-.+.. ...+|+.+.+...||+.+++ .......... .........| +.
T Consensus 94 ~~-d--~v~~i~~~-~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 169 (225)
T 3p2e_A 94 LK-N--IADSISIL-FPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYK 169 (225)
T ss_dssp GT-T--CEEEEEEE-SCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHH
T ss_pred cc-C--eEEEEEEe-CCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHH
Confidence 11 1 22222222 211111 13578888988889998877 2221111000 0111122334 56
Q ss_pred HHHHhCCcee
Q 024907 191 KLFMSNGFGV 200 (260)
Q Consensus 191 ~~~~~~Gw~~ 200 (260)
+.+.+.||.+
T Consensus 170 ~~l~~aGf~v 179 (225)
T 3p2e_A 170 AELSNSGFRI 179 (225)
T ss_dssp HHHHHHTCEE
T ss_pred HHHHHcCCCe
Confidence 7889999996
No 163
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=30.46 E-value=1.4e+02 Score=26.11 Aligned_cols=107 Identities=11% Similarity=0.099 Sum_probs=53.1
Q ss_pred CcceEEEeCCCCCCccccc-CC-C-CCcEEEEeChHHHHHHHHHHHhhc--CCCCCCceeEEeccCCCchHHHHHHhcCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL-NW-P-TSTIIFDISPERIFKISAEKLEGV--GAKIPRSCLFLHVPLESSNIQQALRAKGF 128 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl-~~-~-~~~~~~EvD~P~v~~~K~~~l~~~--~~~~p~~~~~v~vd~~~~dw~~~L~~~Gf 128 (260)
....|+.||||.=.-+..+ .. + ..++.+|+|. ++++.-++.++.. +.. ..+++++..|.. ++ |...
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~-~~i~~Ar~~~~~~~~~~~-~~rv~~~~~D~~--~~---l~~~-- 178 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE-MVIDVAKKFLPGMSCGFS-HPKLDLFCGDGF--EF---LKNH-- 178 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH-HHHHHHHHHCTTTSGGGG-CTTEEEECSCHH--HH---HHHC--
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH-HHHHHHHHHHHHhccccC-CCCEEEEEChHH--HH---HHhc--
Confidence 3468999999965533333 22 2 2455566654 5555544455432 100 125666666543 22 3221
Q ss_pred CCCCCeEEEEccCCCCC-HHHH--HHHHHHHHhccCCCcEEEEeC
Q 024907 129 NGNRPSVWAIQGLPVMT-LASF--EDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 129 d~~~Ptl~i~EGv~Yl~-~~~~--~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.+.=-+|++-....+. .... ..+++.+.++..||+.++++.
T Consensus 179 -~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 179 -KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp -TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred -CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 1122355554431121 1221 577888888888999988875
No 164
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=30.14 E-value=2.1e+02 Score=22.71 Aligned_cols=118 Identities=8% Similarity=0.008 Sum_probs=65.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++=||. |+.++.-++.++..+. +.+++++..|+.. .+ .. . ...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~-~~----~~---~-~~~ 123 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPA-AL----AD---L-PLP 123 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTG-GG----TT---S-CCC
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhh-hc----cc---C-CCC
Confidence 357999999964433333211 445666665 4555544444554432 2368888888752 11 11 0 122
Q ss_pred eEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 134 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 134 tl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
-++++.+.. . .. +++.+.+...||+.+++.....- ......+++..+|+.+
T Consensus 124 D~v~~~~~~--~---~~-~l~~~~~~LkpgG~lv~~~~~~~----------~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 124 EAVFIGGGG--S---QA-LYDRLWEWLAPGTRIVANAVTLE----------SETLLTQLHARHGGQL 174 (204)
T ss_dssp SEEEECSCC--C---HH-HHHHHHHHSCTTCEEEEEECSHH----------HHHHHHHHHHHHCSEE
T ss_pred CEEEECCcc--c---HH-HHHHHHHhcCCCcEEEEEecCcc----------cHHHHHHHHHhCCCcE
Confidence 344444422 2 23 77788887789999888754211 0111335678888875
No 165
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=29.68 E-value=1e+02 Score=26.31 Aligned_cols=108 Identities=10% Similarity=0.114 Sum_probs=57.2
Q ss_pred CcceEEEeCCCCCCccccc-CC-C-CCcEEEEeChHHHHHHHHHHHhhcCCC-CCCceeEEeccCCCchHHHHHHhcCCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL-NW-P-TSTIIFDISPERIFKISAEKLEGVGAK-IPRSCLFLHVPLESSNIQQALRAKGFN 129 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl-~~-~-~~~~~~EvD~P~v~~~K~~~l~~~~~~-~p~~~~~v~vd~~~~dw~~~L~~~Gfd 129 (260)
....|+.||||-=.-...+ .. + ..++.+|+|.. +++.-++.++..+.. ...+.+++..|.. ++ +...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~-~i~~a~~~~~~~~~~~~~~~v~~~~~D~~--~~---l~~~--- 148 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET-VIEVSKIYFKNISCGYEDKRVNVFIEDAS--KF---LENV--- 148 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH-HHHHHHHHCTTTSGGGGSTTEEEEESCHH--HH---HHHC---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHH-HHHHHHHHhHHhccccCCCcEEEEECChH--HH---HHhC---
Confidence 3468999999965543333 22 2 35667777754 444444444432100 0125677766653 23 2221
Q ss_pred CCCCeEEEEccC-CCCCHHHH--HHHHHHHHhccCCCcEEEEeC
Q 024907 130 GNRPSVWAIQGL-PVMTLASF--EDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 130 ~~~Ptl~i~EGv-~Yl~~~~~--~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.+.--++++-.. ...+.+.. ..+++.+.+...||+.+++..
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 122235555443 22222222 567888888778888888764
No 166
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=29.65 E-value=1.7e+02 Score=21.63 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=54.2
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCe
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 134 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Pt 134 (260)
..|+-+|||.=.-...+... +..++=||. |++++.-++.++..+. +++++..|+. ++...+... ....-
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~d~~--~~~~~~~~~---~~~~D 112 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL----GARVVALPVE--VFLPEAKAQ---GERFT 112 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC----CCEEECSCHH--HHHHHHHHT---TCCEE
T ss_pred CeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC----ceEEEeccHH--HHHHhhhcc---CCceE
Confidence 57999999976654444211 122666666 4555544444444421 4666666653 333333221 12334
Q ss_pred EEEEccCCCCCHHHHHHHHHHHH--hccCCCcEEEEeCC
Q 024907 135 VWAIQGLPVMTLASFEDVLLLVG--SLAMNKCLFLGELP 171 (260)
Q Consensus 135 l~i~EGv~Yl~~~~~~~ll~~i~--~~~a~gs~l~~d~~ 171 (260)
++++-.. |. .....+++.+. ++..||+.+++..+
T Consensus 113 ~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 113 VAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 6666554 42 12233444454 66678888877653
No 167
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=29.31 E-value=2.4e+02 Score=23.32 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=39.4
Q ss_pred eEEEEccC-CCCC--HHHHHHHHHHHHhccCCCcEEEEeC-C--hhhh--hhhcCCCcchhHHHHHHHHhCCcee
Q 024907 134 SVWAIQGL-PVMT--LASFEDVLLLVGSLAMNKCLFLGEL-P--AWLA--ETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 134 tl~i~EGv-~Yl~--~~~~~~ll~~i~~~~a~gs~l~~d~-~--~~~~--~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
-+|++-.+ .++. .++...+|+.+.++..||+.+++.. . .+.. .........+...+.++|..+||.+
T Consensus 176 D~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 176 DALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp EEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 45666565 4544 3477889999999988998877642 1 0000 0000011223333568899999986
No 168
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=29.17 E-value=1.1e+02 Score=23.87 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=81.0
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChH-HHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P-~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+... +.+++-+|.. ++++.- ++. ..+++..|+.... ..+..+.-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~----~~~------~~~~~~~d~~~~~-------~~~~~~~f 94 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQA----KEK------LDHVVLGDIETMD-------MPYEEEQF 94 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHH----HTT------SSEEEESCTTTCC-------CCSCTTCE
T ss_pred CCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHH----HHh------CCcEEEcchhhcC-------CCCCCCcc
Confidence 357999999976655555322 3566666663 333321 111 1256666765211 11222334
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCChhh-----hhhh-cC-------------CCcchhHHHHHHH
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL-----AETE-FG-------------NKSTTEKWMDKLF 193 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~-----~~~~-~~-------------~~~~~~~w~~~~~ 193 (260)
-++++-++ .+++.. ..+++.+.+...||+.+++..+... .... .. ....+.....++|
T Consensus 95 D~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMF 172 (230)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHH
T ss_pred CEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHH
Confidence 56666666 456432 4788888888888988887643211 0000 00 0112233356889
Q ss_pred HhCCcee-eeeCHHHHHHHcCCCCCCccchhHHHHHHHhcCC
Q 024907 194 MSNGFGV-GMVSYKEVASSLGKELAPGYYKNILFLAEQLRFS 234 (260)
Q Consensus 194 ~~~Gw~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 234 (260)
..+||++ +..... +..+......+++..++..+|+.
T Consensus 173 ~~~Gf~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~ 209 (230)
T 3cc8_A 173 LKAGYSISKVDRVY-----VDHKMYEPLIEELYGICKKYRLG 209 (230)
T ss_dssp HHTTEEEEEEEEEE-----CCCGGGHHHHHHHHHHHHHTTCC
T ss_pred HHcCCeEEEEEecc-----cChhhccchHHHHHHHHHhhccc
Confidence 9999996 333211 00011112566666666666664
No 169
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=29.17 E-value=45 Score=28.78 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=32.5
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
-+|++-.| .|++++...++++.+.+...||+.+++...
T Consensus 215 DlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 215 DAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred eEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 57788788 599999889999999998889999988653
No 170
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=29.02 E-value=2.5e+02 Score=23.42 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=53.5
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeChHH-HHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPER-IFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~P~-v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-||||.=.-...|... +.+++=||.-+ +++ .... . .+.+++..|++.- .+..+.=
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~-------~a~~-~-~~v~~~~~~~e~~---------~~~~~sf 100 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIR-------QALR-H-PRVTYAVAPAEDT---------GLPPASV 100 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHH-------TCCC-C-TTEEEEECCTTCC---------CCCSSCE
T ss_pred CCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhh-------hhhh-c-CCceeehhhhhhh---------cccCCcc
Confidence 357999999976555555322 45677888743 332 1111 1 2688888887631 1222222
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEE
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL 167 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~ 167 (260)
-++++-.+ .+++.+ ..++.+.+...||+.++
T Consensus 101 D~v~~~~~~h~~~~~---~~~~e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 101 DVAIAAQAMHWFDLD---RFWAELRRVARPGAVFA 132 (257)
T ss_dssp EEEEECSCCTTCCHH---HHHHHHHHHEEEEEEEE
T ss_pred cEEEEeeehhHhhHH---HHHHHHHHHcCCCCEEE
Confidence 34444444 577755 46777888778888765
No 171
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=28.36 E-value=2.8e+02 Score=24.47 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=59.1
Q ss_pred cceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+.+|||.=+....+...+...++-||. |+.++.-++.++..+. ..+++++..|+. ++...+... ....
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~--~~~~~~~~~---~~~f 290 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAF--EEMEKLQKK---GEKF 290 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHT---TCCE
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHH--HHHHHHHhh---CCCC
Confidence 3589999999887666663221224555554 3344433333343332 126778877764 344444321 1234
Q ss_pred eEEEEccCCCCC--H-------HHHHHHHHHHHhccCCCcEEEEe
Q 024907 134 SVWAIQGLPVMT--L-------ASFEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 134 tl~i~EGv~Yl~--~-------~~~~~ll~~i~~~~a~gs~l~~d 169 (260)
-++++-. +|+. . .....++..+.++..||+.+++-
T Consensus 291 D~Vi~dp-P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 291 DIVVLDP-PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp EEEEECC-CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5666533 3432 2 34566777777777888877765
No 172
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=27.70 E-value=44 Score=26.70 Aligned_cols=104 Identities=8% Similarity=0.026 Sum_probs=54.7
Q ss_pred ceEEEeCCCCCCccccc-CCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC-
Q 024907 56 KQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR- 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl-~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~- 132 (260)
..|+-+|||.=.-...+ ... ...++=||. |++++.-++.++..+.. +.+++++..|+. ++ +.. +....
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~d~~--~~---~~~--~~~~~~ 125 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCS-SEQAEVINQSSL--DF---LKQ--PQNQPH 125 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCC-TTTEEEECSCHH--HH---TTS--CCSSCC
T ss_pred CeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCC-ccceEEEECCHH--HH---HHh--hccCCC
Confidence 47999999975544432 222 234556665 34555444444444321 025677766653 22 111 11122
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHHH--hccCCCcEEEEeC
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLVG--SLAMNKCLFLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i~--~~~a~gs~l~~d~ 170 (260)
--++++-.. |- ......+++.+. ++..||+.+++..
T Consensus 126 fD~I~~~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 126 FDVVFLDPP-FH-FNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp EEEEEECCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCEEEECCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 246665444 43 345567788884 3456888887764
No 173
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=26.71 E-value=1.4e+02 Score=27.05 Aligned_cols=110 Identities=11% Similarity=0.042 Sum_probs=57.9
Q ss_pred CCcceEEEeCCCCCCccccc-CC-CCCcEEEEeChHHHHHHHHHHHhhcCC---CCC--CceeEEeccCCCchHHHHHH-
Q 024907 53 DGLKQVVLLTDGMDTRPYRL-NW-PTSTIIFDISPERIFKISAEKLEGVGA---KIP--RSCLFLHVPLESSNIQQALR- 124 (260)
Q Consensus 53 ~g~~QVV~LGaGlDTR~~Rl-~~-~~~~~~~EvD~P~v~~~K~~~l~~~~~---~~p--~~~~~v~vd~~~~dw~~~L~- 124 (260)
+..+.|++||+|-=.-+.-+ .. +..++.+|+|.. +++.-++.++.... ..| .+++++..|.. .|.+.+.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~-vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~--~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM-VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI--PVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHH-HHHHHHHHCCC----CCSSSEETTEEEEESCHH--HHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHH-HHHHHHHHHHHhccccccccCCCcEEEEECcHH--HHHHhhhc
Confidence 34578999999865533322 22 346888999954 55554455543211 112 25677777654 4665542
Q ss_pred -hcCCCCCCCeEEEEccC-------C-C-CCHHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 125 -AKGFNGNRPSVWAIQGL-------P-V-MTLASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 125 -~~Gfd~~~Ptl~i~EGv-------~-Y-l~~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
...|| +||.-.- + . ++.+-.+.+++.+.+...||+.++...
T Consensus 264 ~~~~fD-----vII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 264 EGREFD-----YVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HTCCEE-----EEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCce-----EEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 22233 3333321 1 1 223333444444567777888887664
No 174
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=25.15 E-value=1.9e+02 Score=28.99 Aligned_cols=126 Identities=8% Similarity=0.077 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhhc-c---CCcceEEEeCCCCCCc---ccccCC-----------CCCcEEEEeChHH--HHHHHHH
Q 024907 35 CLTTKFIDDKLLRTVNH-M---DGLKQVVLLTDGMDTR---PYRLNW-----------PTSTIIFDISPER--IFKISAE 94 (260)
Q Consensus 35 ~~Rtr~iDd~l~~~~~~-~---~g~~QVV~LGaGlDTR---~~Rl~~-----------~~~~~~~EvD~P~--v~~~K~~ 94 (260)
.+|+....+.|.+++.. . .+...|+.+|||-=.. +++-.- ....++|=|+--. ++..|..
T Consensus 386 ~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~ 465 (745)
T 3ua3_A 386 QIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYM 465 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHH
Confidence 56777777777666531 0 1235799999998775 333210 0235777777632 3333333
Q ss_pred HHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCCeEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 024907 95 KLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 168 (260)
Q Consensus 95 ~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~ 168 (260)
..... .++++.+..|++ +|.--+...| +.+-=++|+|-+ .++.-|-..++|..+.+...||+.++-
T Consensus 466 ~~Ng~----~d~VtVI~gd~e--ev~lp~~~~~--~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 466 NVRTW----KRRVTIIESDMR--SLPGIAKDRG--FEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHHTT----TTCSEEEESCGG--GHHHHHHHTT--CCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred HhcCC----CCeEEEEeCchh--hcccccccCC--CCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 32222 236889998886 5542222222 456679999998 455444345577777777778877663
No 175
>2kzc_A Uncharacterized protein; DUF1476, JCSG, structutral genomics, PSI-biology, protein ST initiative, structural genomics; NMR {Jannaschia SP}
Probab=24.88 E-value=37 Score=24.58 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=26.8
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHh--hhhcCccCc
Q 024907 224 ILFLAEQLRFSDDQMDTWRRELQRV--EEEGDEEGF 257 (260)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 257 (260)
.++.+..+|++...-+.|...+-.+ ||-+|||-|
T Consensus 15 glWAAe~lGltg~~aeaYa~~vv~adfee~gdedV~ 50 (85)
T 2kzc_A 15 GLWVAEVLGKSGDEANAYAAEVVKADFEEAGHEDVM 50 (85)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHGGGSSSSSSSSSHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 4677889999999999999998766 344566654
No 176
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=24.65 E-value=1.8e+02 Score=25.35 Aligned_cols=107 Identities=11% Similarity=0.142 Sum_probs=56.6
Q ss_pred CcceEEEeCCCCCCccccc-CC-C-CCcEEEEeChHHHHHHHHHHHhhc--CCCCCCceeEEeccCCCchHHHHHHhcCC
Q 024907 54 GLKQVVLLTDGMDTRPYRL-NW-P-TSTIIFDISPERIFKISAEKLEGV--GAKIPRSCLFLHVPLESSNIQQALRAKGF 128 (260)
Q Consensus 54 g~~QVV~LGaGlDTR~~Rl-~~-~-~~~~~~EvD~P~v~~~K~~~l~~~--~~~~p~~~~~v~vd~~~~dw~~~L~~~Gf 128 (260)
....|+.+|||-=.-+..+ .. + ..+..+|+|.. +++.-++.++.. +.. ..+++++..|.. ++ +...
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~-~l~~ar~~~~~~~~~~~-~~~v~~~~~D~~--~~---l~~~-- 186 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET-VIEVSKIYFKNISCGYE-DKRVNVFIEDAS--KF---LENV-- 186 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH-HHHHHHHHCTTTSGGGG-STTEEEEESCHH--HH---HHHC--
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH-HHHHHHHHHHhhccccC-CCcEEEEEccHH--HH---Hhhc--
Confidence 3468999999976644443 22 2 24566666654 444434444431 100 125677766643 22 2211
Q ss_pred CCCCCeEEEEccC-CCCCHHHH--HHHHHHHHhccCCCcEEEEeC
Q 024907 129 NGNRPSVWAIQGL-PVMTLASF--EDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 129 d~~~Ptl~i~EGv-~Yl~~~~~--~~ll~~i~~~~a~gs~l~~d~ 170 (260)
.+.--++++-.. .+-+.... ..+++.+.+...||+.+++..
T Consensus 187 -~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 187 -TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp -CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 122345665443 22112221 567888888778888888764
No 177
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=24.45 E-value=1.5e+02 Score=21.81 Aligned_cols=101 Identities=13% Similarity=-0.012 Sum_probs=56.8
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
...|+-+|||.=.-...+ ..+.+..++=+|..++.+ . .+.+++..|+....+.+.+.. ++..+.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~--------~-----~~~~~~~~d~~~~~~~~~~~~-~~~~~~ 88 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP--------I-----VGVDFLQGDFRDELVMKALLE-RVGDSK 88 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC--------C-----TTEEEEESCTTSHHHHHHHHH-HHTTCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc--------c-----CcEEEEEcccccchhhhhhhc-cCCCCc
Confidence 357999999874433333 212235566666544221 1 267888888875443333331 123334
Q ss_pred CeEEEEccCC-CCCHH---HH------HHHHHHHHhccCCCcEEEEe
Q 024907 133 PSVWAIQGLP-VMTLA---SF------EDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 133 Ptl~i~EGv~-Yl~~~---~~------~~ll~~i~~~~a~gs~l~~d 169 (260)
--++++-+++ ++... .. ..+++.+.++..||+.+++.
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4677776663 33221 11 57788888877788887764
No 178
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=23.29 E-value=3.7e+02 Score=23.36 Aligned_cols=105 Identities=10% Similarity=0.028 Sum_probs=57.9
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHH--hcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALR--AKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~--~~Gfd~~~ 132 (260)
..|+.||||.=.....+... +..++-||. |..++.-++.++..+.. ..+++++..|+. ++...+. ...||
T Consensus 155 ~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~-~~~v~~i~~D~~--~~l~~~~~~~~~fD--- 227 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLE-QAPIRWICEDAM--KFIQREERRGSTYD--- 227 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCT-TSCEEEECSCHH--HHHHHHHHHTCCBS---
T ss_pred CcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEECcHH--HHHHHHHhcCCCce---
Confidence 47999999976655555322 236677776 45555444444433321 113677777664 3443332 12243
Q ss_pred CeEEEEccCCCCC----------HHHHHHHHHHHHhccCCCcEEEEeC
Q 024907 133 PSVWAIQGLPVMT----------LASFEDVLLLVGSLAMNKCLFLGEL 170 (260)
Q Consensus 133 Ptl~i~EGv~Yl~----------~~~~~~ll~~i~~~~a~gs~l~~d~ 170 (260)
++++- -+|+. .+....+++.+.++..||+.+++..
T Consensus 228 --~Ii~d-PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 228 --IILTD-PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp --EEEEC-CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred --EEEEC-CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 44431 12211 3456778888888888888766543
No 179
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=23.25 E-value=2.5e+02 Score=22.91 Aligned_cols=108 Identities=9% Similarity=0.009 Sum_probs=54.6
Q ss_pred cceEEEeCCCCCCccccc--CCCCCcEEEEeCh-HHHHHHHHHHHh---hcCCCCCCceeEEeccCCCchHHHHHHhcCC
Q 024907 55 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLE---GVGAKIPRSCLFLHVPLESSNIQQALRAKGF 128 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl--~~~~~~~~~EvD~-P~v~~~K~~~l~---~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gf 128 (260)
...|+-+|||.=.-...| ..| +..++=||. +.+++.-++.+. ........+++++..|+.. .+...+.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~-~l~~~~~---- 120 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK-HLPNFFY---- 120 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT-CHHHHCC----
T ss_pred CCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH-hhhhhCC----
Confidence 357999999975544444 234 466777777 444443222222 1111112378889888752 2332222
Q ss_pred CCCCCeEEEEccC-CCCCHHH------HHHHHHHHHhccCCCcEEEEe
Q 024907 129 NGNRPSVWAIQGL-PVMTLAS------FEDVLLLVGSLAMNKCLFLGE 169 (260)
Q Consensus 129 d~~~Ptl~i~EGv-~Yl~~~~------~~~ll~~i~~~~a~gs~l~~d 169 (260)
.+.-..+++-.. ++..... ...+++.+.+...||+.+++.
T Consensus 121 -~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 121 -KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp -TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred -CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 222122222111 2221111 136888888888899987764
No 180
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=21.44 E-value=1.4e+02 Score=24.83 Aligned_cols=117 Identities=7% Similarity=-0.050 Sum_probs=65.7
Q ss_pred cceEEEeCCCCCCcccccC-C-CCCcEEEEeCh-HHHHHHHHHHHhhc-CCCCCCceeEEeccCCCchHHHHHHhcCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN-W-PTSTIIFDISP-ERIFKISAEKLEGV-GAKIPRSCLFLHVPLESSNIQQALRAKGFNG 130 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~-~-~~~~~~~EvD~-P~v~~~K~~~l~~~-~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~ 130 (260)
...|+-+|||.=+-...+. . .++.+++-+|. |+.++.-++.+... + ..+++++..|+.. + +..
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~--~--------~~~ 177 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD--F--------ISD 177 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT--C--------CCS
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc--c--------CcC
Confidence 3589999999655444441 1 12467777887 66666555555544 3 1367888887752 1 122
Q ss_pred CCCeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 131 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 131 ~~Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
+.--++++ .++ ....+++.+.+...||+.+++-.+.... .....+.+...||..
T Consensus 178 ~~fD~Vi~----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~----------~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 178 QMYDAVIA----DIP--DPWNHVQKIASMMKPGSVATFYLPNFDQ----------SEKTVLSLSASGMHH 231 (275)
T ss_dssp CCEEEEEE----CCS--CGGGSHHHHHHTEEEEEEEEEEESSHHH----------HHHHHHHSGGGTEEE
T ss_pred CCccEEEE----cCc--CHHHHHHHHHHHcCCCCEEEEEeCCHHH----------HHHHHHHHHHCCCeE
Confidence 22334554 121 1245777788777788887765432100 111235567788874
No 181
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=21.35 E-value=2.6e+02 Score=22.54 Aligned_cols=122 Identities=14% Similarity=0.109 Sum_probs=66.4
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEeCh-HHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCC
Q 024907 56 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 132 (260)
Q Consensus 56 ~QVV~LGaGlDTR~~Rl~--~~~~~~~~EvD~-P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~ 132 (260)
..|+-+|||-=.-...+. .+ +.+++=||. |++++.-++..+..+. .+++++..|+. ++.. .... ...
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~--~~~~---~~~~-~~~ 141 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAE--TFGQ---RKDV-RES 141 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHH--HHTT---CTTT-TTC
T ss_pred CEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHH--Hhcc---cccc-cCC
Confidence 579999999655444443 44 456777776 4455544444444432 25777777653 2210 0000 122
Q ss_pred CeEEEEccCCCCCHHHHHHHHHHHHhccCCCcEEEEeCChhhhhhhcCCCcchhHHHHHHHHhCCcee
Q 024907 133 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 200 (260)
Q Consensus 133 Ptl~i~EGv~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~~~~~~~~~~~~~~~~~w~~~~~~~~Gw~~ 200 (260)
--++++-++ .....+++.+.++..||+.+++-....... ...-..+.+..+||.+
T Consensus 142 fD~V~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~--------~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 142 YDIVTARAV-----ARLSVLSELCLPLVKKNGLFVALKAASAEE--------ELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEEEEEECC-----SCHHHHHHHHGGGEEEEEEEEEEECC-CHH--------HHHHHHHHHHHTTEEE
T ss_pred ccEEEEecc-----CCHHHHHHHHHHhcCCCCEEEEEeCCCchH--------HHHHHHHHHHHcCCeE
Confidence 346666554 235678888888888888876532110000 0011335678899986
No 182
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=20.61 E-value=2.2e+02 Score=22.48 Aligned_cols=94 Identities=7% Similarity=0.065 Sum_probs=50.0
Q ss_pred cceEEEeCCCCCCcccccC-CCCCcEEEEeChHHHHHHHHHHHhhcCCCCCCceeEEeccCCCchHHHHHHhcCCCCCCC
Q 024907 55 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 133 (260)
Q Consensus 55 ~~QVV~LGaGlDTR~~Rl~-~~~~~~~~EvD~P~v~~~K~~~l~~~~~~~p~~~~~v~vd~~~~dw~~~L~~~Gfd~~~P 133 (260)
...|+-+|||.=.-...+. ....+.-+|++ |+.++.-++.+...+ +.+++..|+.. .+. ....|
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~-~~~~~~a~~~~~~~~-----~v~~~~~d~~~-~~~---~~~~f----- 135 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIVDKVVSVEIN-EKMYNYASKLLSYYN-----NIKLILGDGTL-GYE---EEKPY----- 135 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEEESC-HHHHHHHHHHHTTCS-----SEEEEESCGGG-CCG---GGCCE-----
T ss_pred CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCC-HHHHHHHHHHHhhcC-----CeEEEECCccc-ccc---cCCCc-----
Confidence 3579999999754333331 11234445555 455554444444331 57777777642 111 11223
Q ss_pred eEEEEccC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCC
Q 024907 134 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 171 (260)
Q Consensus 134 tl~i~EGv-~Yl~~~~~~~ll~~i~~~~a~gs~l~~d~~ 171 (260)
-++++-++ .++.. .+.+...||+.+++..+
T Consensus 136 D~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 136 DRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred cEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 35666665 45653 24445568888777654
Done!