Query 024908
Match_columns 260
No_of_seqs 140 out of 1457
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 16:32:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 1.3E-43 4.6E-48 300.4 20.1 250 1-258 67-330 (338)
2 3iq0_A Putative ribokinase II; 100.0 3.2E-42 1.1E-46 290.9 24.0 247 1-258 68-314 (330)
3 2qcv_A Putative 5-dehydro-2-de 100.0 1.3E-40 4.5E-45 281.3 28.6 251 1-258 75-327 (332)
4 3pl2_A Sugar kinase, ribokinas 100.0 1.1E-41 3.7E-46 286.5 21.6 246 1-257 72-318 (319)
5 4du5_A PFKB; structural genomi 100.0 3.8E-41 1.3E-45 284.9 21.8 243 1-253 89-334 (336)
6 1tyy_A Putative sugar kinase; 100.0 3.6E-41 1.2E-45 285.4 18.5 246 1-258 81-331 (339)
7 3hj6_A Fructokinase, FRK; fruc 100.0 7.1E-42 2.4E-46 288.5 13.9 242 1-255 85-326 (327)
8 2v78_A Fructokinase; transfera 100.0 2E-40 6.8E-45 278.0 22.2 243 2-258 65-312 (313)
9 3ktn_A Carbohydrate kinase, PF 100.0 5.2E-40 1.8E-44 279.2 23.1 249 1-258 65-333 (346)
10 2dcn_A Hypothetical fructokina 100.0 9.2E-40 3.1E-44 273.8 22.4 242 1-258 64-310 (311)
11 1v1a_A 2-keto-3-deoxygluconate 100.0 2E-39 6.7E-44 271.5 23.9 238 2-257 65-304 (309)
12 3h49_A Ribokinase; transferase 100.0 1.2E-39 4.2E-44 274.6 21.1 242 1-258 74-316 (325)
13 4e3a_A Sugar kinase protein; s 100.0 7.2E-39 2.4E-43 272.5 20.6 235 1-252 111-348 (352)
14 4e69_A 2-dehydro-3-deoxyglucon 100.0 1.3E-37 4.3E-42 262.5 23.9 232 1-243 83-318 (328)
15 3ewm_A Uncharacterized sugar k 100.0 8E-38 2.7E-42 262.2 22.1 236 1-258 64-302 (313)
16 3lhx_A Ketodeoxygluconokinase; 100.0 1.3E-37 4.5E-42 261.6 21.6 232 1-242 64-304 (319)
17 3ry7_A Ribokinase; transferase 100.0 6.4E-38 2.2E-42 261.7 18.9 228 1-252 71-303 (304)
18 2rbc_A Sugar kinase, AGR_C_456 100.0 3.3E-37 1.1E-41 261.4 22.0 230 1-258 97-330 (343)
19 1rkd_A Ribokinase; carbohydrat 100.0 2.5E-37 8.7E-42 258.7 20.4 232 2-257 73-308 (309)
20 3kzh_A Probable sugar kinase; 100.0 1.4E-37 4.8E-42 262.3 18.5 235 1-258 73-311 (328)
21 2afb_A 2-keto-3-deoxygluconate 100.0 2.6E-36 8.9E-41 256.9 25.3 246 1-256 75-343 (351)
22 2c4e_A Sugar kinase MJ0406; tr 100.0 6.2E-37 2.1E-41 255.5 19.6 226 2-257 74-300 (302)
23 4gm6_A PFKB family carbohydrat 100.0 3.3E-36 1.1E-40 256.2 22.9 248 1-257 87-345 (351)
24 3go6_A Ribokinase RBSK; phosph 100.0 5.1E-36 1.8E-40 250.7 23.1 216 1-258 87-306 (310)
25 3vas_A Putative adenosine kina 100.0 3.8E-37 1.3E-41 263.5 16.0 233 1-251 115-365 (370)
26 2nwh_A AGR_C_3442P, carbohydra 100.0 2E-36 6.7E-41 254.2 19.4 235 1-258 70-309 (317)
27 3ikh_A Carbohydrate kinase; tr 100.0 8.1E-37 2.8E-41 254.5 16.7 216 2-258 71-290 (299)
28 3b1n_A Ribokinase, putative; r 100.0 9E-36 3.1E-40 251.0 21.6 228 2-257 78-306 (326)
29 2pkf_A Adenosine kinase; trans 100.0 7.9E-36 2.7E-40 252.2 20.6 230 2-257 87-320 (334)
30 2qhp_A Fructokinase; NP_810670 100.0 6.6E-36 2.3E-40 248.6 19.2 229 2-245 56-288 (296)
31 3loo_A Anopheles gambiae adeno 100.0 5.4E-36 1.9E-40 256.0 18.7 224 2-242 115-355 (365)
32 3otx_A Adenosine kinase, putat 100.0 6.9E-36 2.4E-40 253.9 18.7 224 1-241 100-338 (347)
33 2jg1_A Tagatose-6-phosphate ki 100.0 1.6E-35 5.3E-40 250.0 20.5 229 1-258 86-326 (330)
34 3ie7_A LIN2199 protein; phosph 100.0 4.8E-35 1.6E-39 246.1 23.4 228 1-258 69-305 (320)
35 2fv7_A Ribokinase; structural 100.0 8.2E-36 2.8E-40 251.8 18.8 228 2-252 93-328 (331)
36 1vm7_A Ribokinase; TM0960, str 100.0 2.1E-35 7.1E-40 247.2 20.8 225 2-256 84-310 (311)
37 3umo_A 6-phosphofructokinase i 100.0 7.3E-35 2.5E-39 243.8 22.8 231 1-258 68-308 (309)
38 2f02_A Tagatose-6-phosphate ki 100.0 1.9E-34 6.5E-39 242.7 22.4 229 1-258 68-309 (323)
39 3uq6_A Adenosine kinase, putat 100.0 1.7E-35 5.9E-40 253.5 15.9 237 1-255 117-371 (372)
40 2abq_A Fructose 1-phosphate ki 100.0 1.7E-34 5.8E-39 241.2 20.9 226 1-258 66-299 (306)
41 3cqd_A 6-phosphofructokinase i 100.0 2E-34 6.9E-39 241.1 20.9 229 1-258 68-308 (309)
42 1bx4_A Protein (adenosine kina 100.0 3E-34 1E-38 243.6 18.1 223 2-241 99-337 (345)
43 2jg5_A Fructose 1-phosphate ki 100.0 7.3E-34 2.5E-38 237.4 20.1 226 1-258 66-299 (306)
44 2ajr_A Sugar kinase, PFKB fami 100.0 3.4E-34 1.2E-38 241.9 17.3 230 1-258 81-326 (331)
45 4e84_A D-beta-D-heptose 7-phos 100.0 7.8E-34 2.7E-38 241.3 18.1 224 1-251 124-351 (352)
46 3bf5_A Ribokinase related prot 100.0 6.9E-34 2.3E-38 237.4 15.2 214 1-257 86-301 (306)
47 2abs_A Adenosine kinase, AK; r 100.0 2.5E-33 8.5E-38 241.1 17.7 224 1-241 122-375 (383)
48 3kd6_A Carbohydrate kinase, PF 100.0 3E-32 1E-36 228.3 20.7 236 2-258 60-299 (313)
49 2hlz_A Ketohexokinase; non-pro 100.0 8.8E-32 3E-36 225.3 19.5 212 1-241 85-309 (312)
50 1vk4_A PFKB carbohydrate kinas 100.0 1.9E-32 6.5E-37 227.9 11.2 217 2-251 66-293 (298)
51 2ddm_A Pyridoxine kinase; pyri 99.9 7.5E-27 2.6E-31 192.8 15.8 211 3-239 36-268 (283)
52 2yxt_A Pyridoxal kinase; beta 99.9 2.6E-25 8.9E-30 186.0 13.0 166 61-237 74-269 (312)
53 1jxh_A Phosphomethylpyrimidine 99.9 2.7E-23 9.1E-28 171.8 16.6 161 64-238 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 3.8E-23 1.3E-27 168.3 17.0 162 63-238 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.9 3.5E-22 1.2E-26 163.8 17.3 164 63-238 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.9 4.6E-22 1.6E-26 164.4 16.9 165 62-237 76-259 (289)
57 3mbh_A Putative phosphomethylp 99.9 2.5E-22 8.5E-27 165.9 14.8 166 63-238 77-259 (291)
58 3h74_A Pyridoxal kinase; PSI-I 99.9 1.2E-21 4.2E-26 161.0 16.3 163 63-237 74-248 (282)
59 3zs7_A Pyridoxal kinase; trans 99.8 1.4E-20 4.7E-25 156.0 14.5 165 62-238 75-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 7.8E-17 2.7E-21 131.7 15.1 163 59-236 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.7 5.7E-17 1.9E-21 144.7 14.6 163 63-236 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.4 2E-12 7E-17 104.9 12.9 147 59-212 52-210 (265)
63 3bgk_A SMU.573, putative uncha 99.3 2E-11 7E-16 101.0 12.6 171 60-255 122-303 (311)
64 2r3b_A YJEF-related protein; p 99.3 4.9E-11 1.7E-15 98.7 14.8 170 60-255 108-286 (310)
65 3dzv_A 4-methyl-5-(beta-hydrox 99.3 6.1E-10 2.1E-14 90.1 17.9 158 59-230 54-229 (273)
66 3rpz_A ADP/ATP-dependent NAD(P 99.1 2.3E-09 7.8E-14 87.2 13.9 172 60-256 95-273 (279)
67 3rss_A Putative uncharacterize 99.0 3.5E-09 1.2E-13 93.0 12.9 173 59-255 316-494 (502)
68 3nl6_A Thiamine biosynthetic b 98.8 2.8E-07 9.7E-12 81.6 16.8 154 59-228 301-493 (540)
69 3hpd_A Hydroxyethylthiazole ki 98.7 7.3E-07 2.5E-11 71.6 14.7 147 59-212 52-210 (265)
70 3k5w_A Carbohydrate kinase; 11 98.1 3E-05 1E-09 67.6 11.4 168 61-257 290-467 (475)
71 3drw_A ADP-specific phosphofru 98.1 0.0002 7E-09 61.8 16.1 76 62-141 235-319 (474)
72 1ua4_A Glucokinase, ADP-depend 97.6 0.0017 5.8E-08 56.1 14.4 74 62-140 224-301 (455)
73 1l2l_A ADP-dependent glucokina 97.2 0.014 4.7E-07 50.4 14.5 72 62-138 227-302 (457)
74 1gc5_A ADP-dependent glucokina 96.5 0.11 3.8E-06 44.9 15.1 71 62-137 232-311 (467)
75 3nvt_A 3-deoxy-D-arabino-heptu 47.5 67 0.0023 26.9 7.5 96 62-168 168-287 (385)
76 1vli_A Spore coat polysacchari 43.8 38 0.0013 28.4 5.4 78 78-166 98-192 (385)
77 3g8r_A Probable spore coat pol 41.2 65 0.0022 26.6 6.3 76 78-164 75-167 (350)
78 2yxh_A MAZG-related protein; T 38.9 88 0.003 21.1 6.7 56 195-259 54-114 (116)
79 2wqp_A Polysialic acid capsule 36.2 68 0.0023 26.5 5.7 76 78-164 88-180 (349)
80 1zco_A 2-dehydro-3-deoxyphosph 36.1 1E+02 0.0035 24.1 6.6 93 62-165 49-164 (262)
81 3can_A Pyruvate-formate lyase- 33.6 1.3E+02 0.0044 21.5 10.3 72 81-161 19-95 (182)
82 2fcj_A Small toprim domain pro 33.5 29 0.00099 23.7 2.6 63 62-135 25-87 (119)
83 1vs1_A 3-deoxy-7-phosphoheptul 32.4 98 0.0034 24.5 6.0 76 80-166 88-180 (276)
84 3fs2_A 2-dehydro-3-deoxyphosph 30.4 2.1E+02 0.0072 22.9 7.8 77 81-168 99-193 (298)
85 3o1n_A 3-dehydroquinate dehydr 29.2 2.1E+02 0.0072 22.5 8.3 95 64-173 134-236 (276)
86 3cra_A Protein MAZG; tandem-re 26.1 1E+02 0.0034 24.4 4.9 57 195-258 196-259 (265)
87 3sz8_A 2-dehydro-3-deoxyphosph 25.7 1.7E+02 0.006 23.2 6.3 78 80-168 77-172 (285)
88 3s83_A Ggdef family protein; s 25.1 1.2E+02 0.004 23.3 5.3 51 81-139 139-189 (259)
89 4h1h_A LMO1638 protein; MCCF-l 24.2 2.8E+02 0.0096 22.3 7.6 45 58-102 6-51 (327)
90 3w01_A Heptaprenylglyceryl pho 23.5 1.5E+02 0.005 22.9 5.3 49 52-103 25-73 (235)
91 4a29_A Engineered retro-aldol 23.2 86 0.0029 24.6 3.9 63 60-137 123-186 (258)
92 3c8f_A Pyruvate formate-lyase 23.2 2.3E+02 0.0079 20.9 7.5 74 81-161 85-163 (245)
93 1vr6_A Phospho-2-dehydro-3-deo 22.8 1.7E+02 0.0058 24.1 5.9 16 243-258 324-339 (350)
94 3l5o_A Uncharacterized protein 22.0 72 0.0025 25.2 3.4 43 58-104 181-223 (270)
95 2f62_A Nucleoside 2-deoxyribos 21.7 2.3E+02 0.0077 20.3 7.6 95 66-167 12-107 (161)
96 4fyk_A Deoxyribonucleoside 5'- 20.9 2.3E+02 0.0079 20.1 6.3 93 66-168 4-104 (152)
97 1tqx_A D-ribulose-5-phosphate 20.7 78 0.0027 24.2 3.3 57 64-133 86-150 (227)
98 4gqr_A Pancreatic alpha-amylas 20.7 66 0.0023 27.3 3.2 22 80-101 76-97 (496)
99 3jtx_A Aminotransferase; NP_28 20.5 2.6E+02 0.0088 22.5 6.8 23 79-101 186-208 (396)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=1.3e-43 Score=300.36 Aligned_cols=250 Identities=34% Similarity=0.562 Sum_probs=210.9
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++..+++..+++++++...+++++++|++++.+..+.+.
T Consensus 67 ~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 146 (338)
T 3ljs_A 67 FLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIA 146 (338)
T ss_dssp HHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHH
T ss_pred HHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHH
Confidence 36889999999999998888889999999999899999988876778878888888877889999999999888888888
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.|.++++||+.+..+|.+.......+.++++++|++++|.+|++.|+|..+.++ ..+++.|++.|++
T Consensus 147 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~-~~~~~~l~~~g~~ 225 (338)
T 3ljs_A 147 EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADA-NAVIQQLWQGRAQ 225 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCH-HHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhH-HHHHHHHHhcCCC
Confidence 999999999999999999999999888876555677888899999999999999999998765443 2266888889999
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc--------------CcccccHHHHHHHHHH
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--------------QNLIKDENRLREALLF 226 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g--------------~~~~~~~~~~~~a~~~ 226 (260)
.|+||+|++|++++.++..+++|+++++++|||||||+|+|||+++|++| ++ +++|+++
T Consensus 226 ~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~ 298 (338)
T 3ljs_A 226 LLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRF 298 (338)
T ss_dssp EEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHH
T ss_pred EEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHH
Confidence 99999999999999998899999999999999999999999999999999 67 9999999
Q ss_pred HHHHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 227 ANACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 227 a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
|+++|+.+|++.|+.+++|+++++++++++..
T Consensus 299 A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~~~ 330 (338)
T 3ljs_A 299 AAAVGALAVTRQGAFTAMPMLSEVLSLIQEQS 330 (338)
T ss_dssp HHHHHGGGC----CCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHHHHHhhhc
Confidence 99999999999999989999999999998764
No 2
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=3.2e-42 Score=290.92 Aligned_cols=247 Identities=27% Similarity=0.421 Sum_probs=216.7
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+++++.++++|++++.+++..++...++++++....+++++++|++++.+..+.+.
T Consensus 68 ~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~ 147 (330)
T 3iq0_A 68 INIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMV 147 (330)
T ss_dssp HHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHH
T ss_pred HHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchH
Confidence 36889999999999998888889999999999889997777665566667888888878889999999999877677778
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.+.++++||+.+..+|... .....+.++++++|++++|.+|++.++|..+ ...+++.|.+.|++
T Consensus 148 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~ 223 (330)
T 3iq0_A 148 DAVKKAVTIVKANGGVISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHST---PERAIAGFLEEGVK 223 (330)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCSS---HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCEEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCCC---HHHHHHHHHHcCCC
Confidence 8899999999999999999999888888643 3566778899999999999999999998753 33466788888999
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcCC
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~ 240 (260)
.|+||+|++|+++++++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 224 ~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~ 296 (330)
T 3iq0_A 224 EVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGP 296 (330)
T ss_dssp EEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSS
T ss_pred EEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCC
Confidence 9999999999999998889999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhcc
Q 024908 241 IPALPTKEAALKLLHTVA 258 (260)
Q Consensus 241 ~~~~~~~~~l~~~~~~~~ 258 (260)
.+++|+++++++++++..
T Consensus 297 ~~~~p~~~ev~~~~~~~~ 314 (330)
T 3iq0_A 297 MEGTSRLMEIETFIQRHD 314 (330)
T ss_dssp STTCCCHHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHHHhcc
Confidence 888999999999998754
No 3
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.3e-40 Score=281.33 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=213.6
Q ss_pred CHHHHHHHCCCCCCceEEcC-CCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchh
Q 024908 1 MLANILKENNVDTSGVRYDS-TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~ 79 (260)
++++.|++.||+++++.+.+ +.+|+.+++.++.+|++++.+++...++..+++++++...+++++++|++++.+..+.+
T Consensus 75 ~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 154 (332)
T 2qcv_A 75 FIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPS 154 (332)
T ss_dssp HHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTH
T ss_pred HHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchh
Confidence 36889999999999998775 46899999887777888888776556677788888877778899999999877666656
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
.+.+..+++.+++.+.++++||+.+...|.+.......+.++++++|++++|.+|++.++|....++...+++.|++.|+
T Consensus 155 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 234 (332)
T 2qcv_A 155 REAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSP 234 (332)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCC
Confidence 78888999999999999999999888888766666777888999999999999999999987532333456788889999
Q ss_pred eEEEEecCCCceEEEec-CceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 160 KLLIVTEGSKGCRYYTK-EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~-~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
+.|+||+|++|++++.+ +..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.
T Consensus 235 ~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~ 307 (332)
T 2qcv_A 235 ELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKH 307 (332)
T ss_dssp SEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-
T ss_pred CEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccC
Confidence 99999999999999987 667889998899999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhhcc
Q 024908 239 GAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 239 g~~~~~~~~~~l~~~~~~~~ 258 (260)
|+.+.+|+++++++++++..
T Consensus 308 G~~~~~p~~~ev~~~l~~~~ 327 (332)
T 2qcv_A 308 SSSDAMPSVEEIEALIEKDE 327 (332)
T ss_dssp ----CCCCHHHHHHHHHHTC
T ss_pred CCccCCCCHHHHHHHHhcCC
Confidence 99888999999999987653
No 4
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.1e-41 Score=286.49 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=216.9
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcc-cccccccccchhhhcCccEEEEccccCCCchh
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA-DMLLCESELDKNLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~ 79 (260)
++++.|++.||+++++.+.++.+|+++++.++.+|++.+.+++.+++ +..+++++++...+++++++|++++.+..+.+
T Consensus 72 ~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (319)
T 3pl2_A 72 YLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPS 151 (319)
T ss_dssp HHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTH
T ss_pred HHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchh
Confidence 36889999999999998888889999999888889998888866555 66788888888888999999999987766666
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
.+....+++.+++ +.++++||+.+..+|.++......+.++++++|++++|.+|++.++|..+. ..+++.|.+.|+
T Consensus 152 ~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~~~~~l~~~g~ 227 (319)
T 3pl2_A 152 RGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEP---ERAGRALLERGV 227 (319)
T ss_dssp HHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCSH---HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCCH---HHHHHHHHhcCC
Confidence 6777777777666 567899999999999888777888899999999999999999999997543 346678888999
Q ss_pred eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcC
Q 024908 160 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 239 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g 239 (260)
+.|+||+|.+|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|
T Consensus 228 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G 300 (319)
T 3pl2_A 228 ELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLE 300 (319)
T ss_dssp SEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998888999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhhc
Q 024908 240 AIPALPTKEAALKLLHTV 257 (260)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~ 257 (260)
+...+|+++|+++++++.
T Consensus 301 ~~~~~p~~~ev~~~l~~~ 318 (319)
T 3pl2_A 301 CSTAMPTTDEVEASLNQK 318 (319)
T ss_dssp SGGGCCCHHHHHHHCC--
T ss_pred CcCCCCCHHHHHHHHhcc
Confidence 988899999999998764
No 5
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=3.8e-41 Score=284.94 Aligned_cols=243 Identities=27% Similarity=0.383 Sum_probs=204.5
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCC-ceeEEEeeCCcccccccccccchhhhcCccEEEEccccC-CCch
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADG-EREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEP 78 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~ 78 (260)
++++.|++.||+++++.+.++.+|+.+++..+.+| ++.+.+++..++...+++++++...+++++++|++++.+ ..+.
T Consensus 89 ~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~ 168 (336)
T 4du5_A 89 YLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISAT 168 (336)
T ss_dssp HHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTT
T ss_pred HHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChH
Confidence 36889999999999998888889999999988888 455656666677778888889888899999999988655 4666
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCC
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPN 158 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g 158 (260)
+.+.+..+++.+++.+.++++||..+...|.+.......+.++++++|++++|..|++.++|..+. ..+++.|.+.|
T Consensus 169 ~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~~---~~~~~~l~~~g 245 (336)
T 4du5_A 169 TLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTP---EGVARFYRQLG 245 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCSH---HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCCH---HHHHHHHHhcC
Confidence 778889999999999999999999999989877677788889999999999999999999997543 34667888899
Q ss_pred CeEEEEecCCCceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 159 LKLLIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 159 ~~~vivt~G~~G~~~~~~~~~~~~~~~~~~-~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
++.|+||+|.+|++++.+++.+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 246 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~ 318 (336)
T 4du5_A 246 AKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQV 318 (336)
T ss_dssp CSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcc
Confidence 999999999999999988888999999987 999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 024908 238 RGAIPALPTKEAALKL 253 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~~ 253 (260)
.|+.+++|+++|+++.
T Consensus 319 ~G~~~~~p~~~ev~~~ 334 (336)
T 4du5_A 319 LGDSEGLPTRAELNAA 334 (336)
T ss_dssp -----CCCCHHHHHCC
T ss_pred CCCccCCCCHHHHHhc
Confidence 9999889999999763
No 6
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=3.6e-41 Score=285.40 Aligned_cols=246 Identities=34% Similarity=0.496 Sum_probs=205.7
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+++++.++++|+|++.+++..+++..++++ ....++++|++|++++.+..+.+.
T Consensus 81 ~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~ 158 (339)
T 1tyy_A 81 FLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAR 158 (339)
T ss_dssp HHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHH
T ss_pred HHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccH
Confidence 368899999999999988888899999998888899988877655666666554 234578899999988766677778
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.+.++++||+.+..+|.+.+.....+.++++++|++++|.+|++.++|..+.++ +++.|.+.|++
T Consensus 159 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~---~~~~l~~~g~~ 235 (339)
T 1tyy_A 159 EACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQD---ARYYLRDLGCD 235 (339)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGGG---GSSTTGGGTCS
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHH---HHHHHHHcCCC
Confidence 889999999999999999999988888876555667778899999999999999999999865433 44667778999
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc-----CcccccHHHHHHHHHHHHHHhhHHh
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-----QNLIKDENRLREALLFANACGALTV 235 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g-----~~~~~~~~~~~~a~~~a~~~Aa~~~ 235 (260)
.||||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++| ++ +++|+++|+++|+.++
T Consensus 236 ~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v 308 (339)
T 1tyy_A 236 TTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAV 308 (339)
T ss_dssp CEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGG
T ss_pred EEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHh
Confidence 99999999999999888888999998999999999999999999999997 77 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHhhcc
Q 024908 236 TERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 236 ~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++.|+.+++|+.+++++++++.+
T Consensus 309 ~~~G~~~~~p~~~ev~~~l~~~~ 331 (339)
T 1tyy_A 309 TAKGAMTALPFPDQLNTFLSSHS 331 (339)
T ss_dssp GSSSTTTTCCCHHHHHHHHC---
T ss_pred CCCCCCCCCCCHHHHHHHHhcCc
Confidence 99999888999999999988765
No 7
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=7.1e-42 Score=288.49 Aligned_cols=242 Identities=31% Similarity=0.513 Sum_probs=189.2
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+++++..+ +|+++++.++ +++..++++++....++++|++|++++.+..+.+.
T Consensus 85 ~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~ 161 (327)
T 3hj6_A 85 YLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILSRKPAR 161 (327)
T ss_dssp HHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHH
T ss_pred HHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEECchHhcCchhH
Confidence 36889999999999998888889999888765 6888888774 46777777777777889999999999877666678
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.++++++||+++..+|.........+.++++++|++++|.+|++.++|..+.++ +++.|.+.|++
T Consensus 162 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~---~~~~l~~~g~~ 238 (327)
T 3hj6_A 162 DTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPEN---YVKRYLELGVK 238 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSSG---GGGGGTTTTCS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHH---HHHHHHhCCCC
Confidence 899999999999999999999988888865444566778899999999999999999999865544 45678889999
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcCC
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~ 240 (260)
.|+||+|++|+++++++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 239 ~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~ 311 (327)
T 3hj6_A 239 AVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGA 311 (327)
T ss_dssp EEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC-----
T ss_pred EEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999998888999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHh
Q 024908 241 IPALPTKEAALKLLH 255 (260)
Q Consensus 241 ~~~~~~~~~l~~~~~ 255 (260)
..++|++++++++++
T Consensus 312 ~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 312 LSPVPSKEDIIKEYN 326 (327)
T ss_dssp ---------------
T ss_pred CCCCCCHHHHHHHhc
Confidence 988999999999875
No 8
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=2e-40 Score=278.05 Aligned_cols=243 Identities=26% Similarity=0.407 Sum_probs=211.6
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEE--EccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCC-Cch
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEP 78 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~-~~~ 78 (260)
+++.|++.||+++++.+.++.+|+++++. ++++|++++.+++..+++..+++++++...+++++++|++++.+. .+.
T Consensus 65 ~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 144 (313)
T 2v78_A 65 IIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDN 144 (313)
T ss_dssp HHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHH
T ss_pred HHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChH
Confidence 68899999999999988888899999998 888899998877655677778888887777889999999987552 455
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCC--EEecCHHHHhhhcCCCCCCchHHHHHHhcC
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQAD--IIKVSDDEITFLTGGDDHNDDNVVLEKLFH 156 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d--vl~~n~~E~~~l~g~~~~~~~~~~~~~l~~ 156 (260)
+.+.+..+++.+++. ++||+.+..+|.+.....+.+.++++++| ++++|.+|++.++|..+ ..++++.|.+
T Consensus 145 ~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~---~~~~~~~l~~ 217 (313)
T 2v78_A 145 AKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTD---PDEAYRKYKE 217 (313)
T ss_dssp HHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCC---HHHHHHHHHh
Confidence 667777788777654 88999888888766666777888999999 99999999999998753 3346678888
Q ss_pred CCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 157 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 157 ~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
.|++.|+||+|++|++++.++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.+++
T Consensus 218 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~ 290 (313)
T 2v78_A 218 LGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVIT 290 (313)
T ss_dssp TTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 99999999999999999988888899999899999999999999999999999999 99999999999999999
Q ss_pred hcCCCCCCCCHHHHHHHHhhcc
Q 024908 237 ERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 237 ~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+.|+.+.+|+.+++++++++++
T Consensus 291 ~~G~~~~~~~~~~v~~~~~~~~ 312 (313)
T 2v78_A 291 VRGDNELTPTLEDAERFLNEFK 312 (313)
T ss_dssp SSSSSTTCCCHHHHHHHHHHCC
T ss_pred cCCCCCCCCCHHHHHHHHHhcc
Confidence 9999988899999999998764
No 9
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=5.2e-40 Score=279.16 Aligned_cols=249 Identities=22% Similarity=0.241 Sum_probs=213.1
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEe--eCCcccccccccccc-hhhhcCccEEEEccccC-CC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFF--RHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IA 76 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~-~~ 76 (260)
++++.|++.||+++++.+. +.+|+++++..+.+++++++.+ +..++...+++++++ ...++++|++|++++.+ ..
T Consensus 65 ~i~~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~ 143 (346)
T 3ktn_A 65 AGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLT 143 (346)
T ss_dssp HHHHHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHC
T ss_pred HHHHHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCC
Confidence 3688999999999999875 6799999998876666665554 555666778888887 46789999999998765 35
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCH--HHHHHHHHHHhhhCCEEecCHHHHhhhcCCC-CC-----CchH
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSE--EAAREGIMSIWDQADIIKVSDDEITFLTGGD-DH-----NDDN 148 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~-~~-----~~~~ 148 (260)
+.+.+.+..+++.+++.|+++++||+.+..+|... ......+.++++++|++++|..|++.|+|.. .. ++..
T Consensus 144 ~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 223 (346)
T 3ktn_A 144 EKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQET 223 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHH
Confidence 55668899999999999999999999988888643 5566788889999999999999999999977 32 2345
Q ss_pred HHHHHhcC-CCCeEEEEecCCCc-------eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHH
Q 024908 149 VVLEKLFH-PNLKLLIVTEGSKG-------CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRL 220 (260)
Q Consensus 149 ~~~~~l~~-~g~~~vivt~G~~G-------~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~ 220 (260)
.+++.|.+ .|++.|+||+|.+| ++++.++..+++|+++++++||+||||+|+|||+++|++|++ +
T Consensus 224 ~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l 296 (346)
T 3ktn_A 224 ELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------L 296 (346)
T ss_dssp HHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------H
T ss_pred HHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------H
Confidence 56777877 49999999999998 888888888899999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 221 REALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 221 ~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++|+++|+++|+.++++.|+.+ +|+.+++++++++.+
T Consensus 297 ~~a~~~A~a~aa~~v~~~G~~~-~p~~~ev~~~l~~~~ 333 (346)
T 3ktn_A 297 EKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEHPN 333 (346)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCC-CCCHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHhcCC
Confidence 9999999999999999999986 899999999998764
No 10
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=9.2e-40 Score=273.77 Aligned_cols=242 Identities=24% Similarity=0.391 Sum_probs=210.1
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCc--eeEEEeeCCcccccccccccchhhhcCccEEEEccccC-CCc
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAE 77 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~ 77 (260)
++++.|++.||+++++.+.++.+|+++++.++.+|+ +++.+++..+++..+++++++...+++++++|++++.+ ..+
T Consensus 64 ~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 143 (311)
T 2dcn_A 64 NAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISS 143 (311)
T ss_dssp HHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCH
T ss_pred HHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccCh
Confidence 368899999999999988888899999999888898 88887765667777888888777889999999998765 355
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhhcCCCCCCchHHHHHHhc
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVLEKLF 155 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~ 155 (260)
.+.+.+..+++.+++. ++||+.+..+|. .....+.+.++++ ++|++++|.+|++.++|..+ ..++++.|.
T Consensus 144 ~~~~~~~~~~~~a~~~----~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~ 215 (311)
T 2dcn_A 144 TAKEAVYKAFEIASNR----SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGESD---PDKAAKAFS 215 (311)
T ss_dssp HHHHHHHHHHHHCSSE----EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCC---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh----CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCC---HHHHHHHHH
Confidence 6677888888877654 889998888885 5555667788999 99999999999999998753 334667888
Q ss_pred CCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHh
Q 024908 156 HPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTV 235 (260)
Q Consensus 156 ~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~ 235 (260)
+. ++.|+||+|++|+++++++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++
T Consensus 216 ~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v 287 (311)
T 2dcn_A 216 DY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNV 287 (311)
T ss_dssp TT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHT
T ss_pred Hh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHh
Confidence 88 999999999999999988888889999899999999999999999999999999 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHhhcc
Q 024908 236 TERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 236 ~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++.|+.+.+|+.+++++++++++
T Consensus 288 ~~~G~~~~~~~~~~v~~~~~~~~ 310 (311)
T 2dcn_A 288 MIRGDQENLPTTKDIETFLREMK 310 (311)
T ss_dssp TSSSSSTTCCCHHHHHHHHHHC-
T ss_pred ccCCCCCCCCCHHHHHHHHHhcc
Confidence 99999988899999999998875
No 11
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=2e-39 Score=271.51 Aligned_cols=238 Identities=26% Similarity=0.334 Sum_probs=205.9
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccC-CCchhH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCR 80 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~ 80 (260)
+++.|++.||+++++.+.++ +|+++++.++.+|++++.+++..++...+++++++...++++|++|++++.+ ..+.+.
T Consensus 65 i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 143 (309)
T 1v1a_A 65 VEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEAR 143 (309)
T ss_dssp HHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHH
T ss_pred HHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHH
Confidence 68899999999999988888 9999999988889998887766566677888888777788999999998766 356677
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.+.++++||+.+..+|. .+...+.+.++++++|++++|.+|++.++|.. .++++ +.|++
T Consensus 144 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~-----~~~~~---~~g~~ 214 (309)
T 1v1a_A 144 AFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV-----EEALR---ALSAP 214 (309)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----HHHHH---HTCCS
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----HHHHH---hcCCC
Confidence 88899999999999999999998888783 55566777889999999999999999999864 22333 67999
Q ss_pred EEEEecCCCceEEEec-CceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcC
Q 024908 161 LLIVTEGSKGCRYYTK-EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 239 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~-~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g 239 (260)
.|+||+|++|+++ .+ +..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|
T Consensus 215 ~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G 286 (309)
T 1v1a_A 215 EVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRG 286 (309)
T ss_dssp EEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSST
T ss_pred EEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC
Confidence 9999999999998 66 667888998889999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhhc
Q 024908 240 AIPALPTKEAALKLLHTV 257 (260)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~ 257 (260)
+.+++|+.+++++++++.
T Consensus 287 ~~~~~~~~~~v~~~~~~~ 304 (309)
T 1v1a_A 287 DHEGAPYREDLEVLLKAT 304 (309)
T ss_dssp TTTTCCCHHHHTTCC---
T ss_pred CCcCCCCHHHHHHHHhhc
Confidence 998889999998877653
No 12
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=1.2e-39 Score=274.59 Aligned_cols=242 Identities=23% Similarity=0.330 Sum_probs=203.1
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|++++++++++|+|++++++. .+...++.++++...+.+++++|++++......+.
T Consensus 74 ~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (325)
T 3h49_A 74 FILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDG 152 (325)
T ss_dssp HHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCH
T ss_pred HHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecccCCcccCH
Confidence 36889999999999998888889999999999999999887632 34455677777777889999999998654333345
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.+ .+++|+..+..+|.. .+.+.++++++|++++|..|++.++|..+.+ .+++.|.+.|++
T Consensus 153 ~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~---~~~~~l~~~g~~ 224 (325)
T 3h49_A 153 KALTEIFTQAKARQ-MIICADMIKPRLNET----LDDICEALSYVDYLFPNFAEAKLLTGKETLD---EIADCFLACGVK 224 (325)
T ss_dssp HHHHHHHHHHHHTT-CEEEEEECCCSSCCC----HHHHHHHHTTCSEEECBHHHHHHHHTCSSHH---HHHHHHHTTTCS
T ss_pred HHHHHHHHHHHhcC-CEEEecCCchhhhhH----HHHHHHHHhhCCEEecCHHHHHHHhCCCCHH---HHHHHHHHcCCC
Confidence 78888999999988 577787777776644 3345678899999999999999999976433 366788889999
Q ss_pred EEEEecCCCceEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcC
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 239 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~-~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g 239 (260)
.|+||+|++|++++.++..+++|++++ +++||+||||+|+|||+++|++|++ +++|+++|+++|+.+|++.|
T Consensus 225 ~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G 297 (325)
T 3h49_A 225 TVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVG 297 (325)
T ss_dssp EEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS
T ss_pred EEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccC
Confidence 999999999999999888889998875 8999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhhcc
Q 024908 240 AIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~~ 258 (260)
+.+++|++++++++++++.
T Consensus 298 ~~~~~p~~~ev~~~l~~~~ 316 (325)
T 3h49_A 298 ATTGVKNRKLVEQLLEEYE 316 (325)
T ss_dssp SSSSCSSSHHHHTC-----
T ss_pred CCCCCCCHHHHHHHHHhcc
Confidence 9989999999999988765
No 13
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=7.2e-39 Score=272.48 Aligned_cols=235 Identities=19% Similarity=0.261 Sum_probs=202.9
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+.++++++++|+|++..+ .++...+++++++...+++++++|++++.+..+.+.
T Consensus 111 ~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~~~~~~~~ 188 (352)
T 4e3a_A 111 IFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYLWDPPRAK 188 (352)
T ss_dssp HHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSSSHH
T ss_pred HHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeeecCCchHH
Confidence 368899999999999887777899999999999999999877 456667888888888899999999999876667788
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCC
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPN 158 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g 158 (260)
+.+..+++.+++.|.++++||..+.. .....+.+.++++ ++|++++|.+|++.++|..+.+ .+++.|.+ +
T Consensus 189 ~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~~~---~a~~~l~~-~ 260 (352)
T 4e3a_A 189 EAILDCARIAHQHGREMSMTLSDSFC----VDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDFE---EALNRIAA-D 260 (352)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCHHH----HHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSCHH---HHHHHHHH-H
T ss_pred HHHHHHHHHHHHcCCEEEEECCchhh----HHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCCHH---HHHHHHhc-C
Confidence 89999999999999999999963211 2334566778898 8999999999999999975443 34455554 7
Q ss_pred CeEEEEecCCCceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 159 LKLLIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 159 ~~~vivt~G~~G~~~~~~~~~~~~~~~~~~-~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|.+|++ +++|+++|+++|+.+|++
T Consensus 261 ~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~aAa~~v~~ 333 (352)
T 4e3a_A 261 CKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAAGIVIQQ 333 (352)
T ss_dssp SSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcC
Confidence 889999999999999999989999999885 899999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 024908 238 RGAIPALPTKEAALK 252 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~ 252 (260)
.|+.+.+|.++.+++
T Consensus 334 ~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 334 IGPRPMTSLSEAAKQ 348 (352)
T ss_dssp SSSSCSSCHHHHHHH
T ss_pred CCCCCCcCHHHHHHH
Confidence 999988877777765
No 14
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=1.3e-37 Score=262.48 Aligned_cols=232 Identities=27% Similarity=0.429 Sum_probs=200.8
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccc-cccccccchhhhcCccEEEEccccC--CCc
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADM-LLCESELDKNLIKQGSIFHYGSISL--IAE 77 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~~~~~~~--~~~ 77 (260)
++++.|++.||+++++.+.++.+|+++++.++ +|+|++++++...+.. .++..++....++++|++|++++.+ ..+
T Consensus 83 ~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 161 (328)
T 4e69_A 83 QMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQ 161 (328)
T ss_dssp HHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHHHHTSCH
T ss_pred HHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCchhhccCc
Confidence 36889999999999998888889999999998 8999998885543322 2334444457789999999998654 356
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCC
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHP 157 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~ 157 (260)
.+.+.+.++++.+++.+.++++||+.+..+|.+.......+.++++++|++++|..|++.++|..+ ..++++.|.+.
T Consensus 162 ~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~ 238 (328)
T 4e69_A 162 CGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAG---PDATADRYARA 238 (328)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCSS---HHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCCC---HHHHHHHHHhc
Confidence 677888999999999999999999988888877777788888999999999999999999998763 34467888899
Q ss_pred CCeEEEEecCCCceEEEecCceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 158 NLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 158 g~~~vivt~G~~G~~~~~~~~~~~~~~~~-~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
|++.|+||.|++|++++.++..+++|+++ ++++||+||||+|+|||+++|++|++ +++|+++|+++|+.+|+
T Consensus 239 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~ 311 (328)
T 4e69_A 239 GVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALAGQVVQ 311 (328)
T ss_dssp TCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHc
Confidence 99999999999999999988888999876 78999999999999999999999999 99999999999999999
Q ss_pred hcCCCCC
Q 024908 237 ERGAIPA 243 (260)
Q Consensus 237 ~~g~~~~ 243 (260)
+.|+.++
T Consensus 312 ~~Ga~~p 318 (328)
T 4e69_A 312 GKGALVE 318 (328)
T ss_dssp SSSSSCC
T ss_pred cCCCcCC
Confidence 9998753
No 15
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=8e-38 Score=262.20 Aligned_cols=236 Identities=31% Similarity=0.493 Sum_probs=204.7
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+++++.++. |+++++.+. ..++..+++++++...+++++++|++++.+..+.+.
T Consensus 64 ~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~-~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 141 (313)
T 3ewm_A 64 YLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYD-DVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSR 141 (313)
T ss_dssp HHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECC-SSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHH
T ss_pred HHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeec-cCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchH
Confidence 368899999999999988888899999998765 899988873 335566888888877888999999999877777788
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~-~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
+.+..+++.++ .++++++||+.+..+|. ........+.++++++|++++|.+|++.+.+.... ..+.
T Consensus 142 ~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~-----------~~~~ 209 (313)
T 3ewm_A 142 ETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE-----------VKGS 209 (313)
T ss_dssp HHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-----------CCCS
T ss_pred HHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-----------ccCc
Confidence 89999999888 47899999998888786 45566778888999999999999999998775322 1345
Q ss_pred eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHH--hcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 160 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA--ADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~--~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
+.|+||+|++|++++.++..+++|+++++++||+||||+|+|||+++|+ +|++ +++|+++|+++|+.++++
T Consensus 210 ~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~ 282 (313)
T 3ewm_A 210 MLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQK 282 (313)
T ss_dssp SEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTS
T ss_pred eEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHcc
Confidence 6689999999999999888889999999999999999999999999999 9999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhcc
Q 024908 238 RGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~~~~~~~ 258 (260)
.|+.+ +|++++++++++.++
T Consensus 283 ~G~~~-~p~~~ev~~~l~~~~ 302 (313)
T 3ewm_A 283 RGAWS-TPRKDELLKYKEARE 302 (313)
T ss_dssp CSSCC-CCCHHHHTTSHHHHH
T ss_pred CCCCC-CCCHHHHHHHHHHHH
Confidence 99974 899999999887764
No 16
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.3e-37 Score=261.55 Aligned_cols=232 Identities=24% Similarity=0.342 Sum_probs=195.8
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCc-ccccccccccc--hhhhcCccEEEEccccC--C
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPS-ADMLLCESELD--KNLIKQGSIFHYGSISL--I 75 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~d~v~~~~~~~--~ 75 (260)
++++.|+++||+++++.+.++.+|+++++.++++|+|++++++... ++..+++++++ ...++++|++|++++.+ .
T Consensus 64 ~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l 143 (319)
T 3lhx_A 64 QMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAIL 143 (319)
T ss_dssp HHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTS
T ss_pred HHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhc
Confidence 3688999999999999888888999999999889999998885433 33345554443 25688999999998654 3
Q ss_pred CchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhc
Q 024908 76 AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLF 155 (260)
Q Consensus 76 ~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~ 155 (260)
.+.+.+.+..+++.+++.+.++++||+.+..+|.+.+.....+.++++++|++++|.+|++.++|..+ ...+++.|.
T Consensus 144 ~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~~---~~~~~~~l~ 220 (319)
T 3lhx_A 144 SPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQP---VEDVIARTH 220 (319)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCCC---HHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCCC---HHHHHHHHH
Confidence 56677889999999999999999999988888887777788888999999999999999999998753 334668888
Q ss_pred CCCCeEEEEecCCCceEEEecCcee-eecCc---ccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHh
Q 024908 156 HPNLKLLIVTEGSKGCRYYTKEFKG-RVPGV---KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 231 (260)
Q Consensus 156 ~~g~~~vivt~G~~G~~~~~~~~~~-~~~~~---~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~A 231 (260)
+.|++.|+||+|.+|++++.+++.+ ++|++ +++++||+||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 221 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~a 293 (319)
T 3lhx_A 221 NAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTA 293 (319)
T ss_dssp HTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHH
T ss_pred hcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 8999999999999999999887655 88875 568999999999999999999999999 999999999999
Q ss_pred hHHhhhcCCCC
Q 024908 232 ALTVTERGAIP 242 (260)
Q Consensus 232 a~~~~~~g~~~ 242 (260)
+.++++.|+.+
T Consensus 294 a~~v~~~Ga~~ 304 (319)
T 3lhx_A 294 STVIQYRGAII 304 (319)
T ss_dssp HHHTTSSSSSC
T ss_pred HhhhccCCCcC
Confidence 99999999974
No 17
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=6.4e-38 Score=261.74 Aligned_cols=228 Identities=24% Similarity=0.337 Sum_probs=198.2
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hhhcCccEEEEccccCCCch
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEP 78 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~v~~~~~~~~~~~ 78 (260)
++++.|++.||+++++.+.++.+|+++++.++++|+++++.+ .+++..+++++++. ..+++++++++++ +.
T Consensus 71 ~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~ 143 (304)
T 3ry7_A 71 FILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EV 143 (304)
T ss_dssp HHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TS
T ss_pred HHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CC
Confidence 368899999999999988888899999999998899998877 45666677776653 4678999998874 23
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--CchHHHHHHhcC
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFH 156 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~~l~~ 156 (260)
+.+.+..+++.+++.+.++++||.+... .+.++++++|++++|.+|++.++|.... ++..++++.|.+
T Consensus 144 ~~~~~~~~~~~a~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 213 (304)
T 3ry7_A 144 PIPAIISAFEIAKAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLS 213 (304)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 5678888999999999999999975421 2346788999999999999999998643 334557788888
Q ss_pred CCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc-CcccccHHHHHHHHHHHHHHhhHHh
Q 024908 157 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-QNLIKDENRLREALLFANACGALTV 235 (260)
Q Consensus 157 ~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g-~~~~~~~~~~~~a~~~a~~~Aa~~~ 235 (260)
.|++.|+||+|++|++++.++..+++|+++++++||+||||+|+|||+++|++| ++ +++|+++|+++|+.++
T Consensus 214 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~ 286 (304)
T 3ry7_A 214 IGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTV 286 (304)
T ss_dssp TTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTS
T ss_pred cCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHh
Confidence 999999999999999999988899999999999999999999999999999999 99 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHH
Q 024908 236 TERGAIPALPTKEAALK 252 (260)
Q Consensus 236 ~~~g~~~~~~~~~~l~~ 252 (260)
++.|+.+++|+++|+++
T Consensus 287 ~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 287 QKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp CCCCTGGGCCCHHHHHT
T ss_pred CCCCccccCCCHHHHhh
Confidence 99999988999999975
No 18
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.3e-37 Score=261.37 Aligned_cols=230 Identities=22% Similarity=0.225 Sum_probs=197.3
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|++++++++++|+++++.++ +++..++++++....++++|++|+++.. .
T Consensus 97 ~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~l~~~~~v~~~~~~------~ 168 (343)
T 2rbc_A 97 RILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFY--DHRLHEKKRACTPEDIALFDAVLVDVRW------P 168 (343)
T ss_dssp HHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEEC--CGGGGSSCCCCCHHHHTTCSEEEECSSS------H
T ss_pred HHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcC--CCcccCChhHhcHhhhCCCCEEEEcCCC------H
Confidence 3688999999999999888888999999999988999987663 3455567677766678899999998753 2
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHH-HhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS-IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
+.+..+++.+++.++++++||... ...+.+ +++++|++++|.+|++.++|..+ ..++++.|.+.|+
T Consensus 169 ~~~~~~~~~a~~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~---~~~~~~~l~~~g~ 235 (343)
T 2rbc_A 169 ELALDVLTVARALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLET---VKDMLPVLHARYP 235 (343)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCSS---HHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCCC---HHHHHHHHHHhCC
Confidence 467788899999999999999631 234556 88999999999999999998753 3346678888898
Q ss_pred -eEEEEecCCCceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 160 -KLLIVTEGSKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 160 -~~vivt~G~~G~~~~~~~--~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
+.|+||+|.+|++++.++ ..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.+++
T Consensus 236 ~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~ 308 (343)
T 2rbc_A 236 QTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCT 308 (343)
T ss_dssp TSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 999999999999999877 78889999899999999999999999999999999 99999999999999999
Q ss_pred hcCCCCCCCCHHHHHHHHhhcc
Q 024908 237 ERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 237 ~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+.|+.+.+|+.++++++++++.
T Consensus 309 ~~G~~~~~p~~~ev~~~l~~~~ 330 (343)
T 2rbc_A 309 VFGGRIGAPTREETEEAMRQWL 330 (343)
T ss_dssp SSSGGGGCCCHHHHHHHHHHHH
T ss_pred CCCCccCCCCHHHHHHHHHhcc
Confidence 9999877899999999987653
No 19
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=2.5e-37 Score=258.70 Aligned_cols=232 Identities=25% Similarity=0.351 Sum_probs=198.1
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hhhcCccEEEEccccCCCchh
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 79 (260)
+++.|++.||+++++.+.++.+|++++++++++|+++++.+ .+++..+++++++. ..+++++++++++. .+
T Consensus 73 i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~ 145 (309)
T 1rkd_A 73 VRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SP 145 (309)
T ss_dssp HHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SC
T ss_pred HHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CC
Confidence 67899999999999988888899999999998899998876 45555677766653 46778999988653 24
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--CchHHHHHHhcCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHP 157 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~~l~~~ 157 (260)
.+.+..+++.+++.+.++++||.++.. | ...+++++|++++|.+|++.++|.... ++...+++.|.+.
T Consensus 146 ~~~~~~~~~~a~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 215 (309)
T 1rkd_A 146 LESVMAAAKIAHQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEK 215 (309)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHh
Confidence 567888899999999999999986532 1 135778999999999999999987532 2344567888889
Q ss_pred CCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 158 NLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 158 g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
|++.|+||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 216 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 216 GIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTR 288 (309)
T ss_dssp TCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCC
Confidence 9999999999999999988888889998889999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhc
Q 024908 238 RGAIPALPTKEAALKLLHTV 257 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~~~~~~ 257 (260)
.|+.+.+|+.+++++++++.
T Consensus 289 ~G~~~~~p~~~ev~~~~~~~ 308 (309)
T 1rkd_A 289 KGAQPSVPWREEIDAFLDRQ 308 (309)
T ss_dssp SSSGGGCCCHHHHHHHHHTC
T ss_pred CCccCCCCCHHHHHHHHhcC
Confidence 99987889999999998754
No 20
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.4e-37 Score=262.34 Aligned_cols=235 Identities=14% Similarity=0.124 Sum_probs=197.8
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccc--hhhhcCccEEEEccccCCCch
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEP 78 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~ 78 (260)
++++.|++.||+++++.+.++.+|+.++++++++|++.+.+.. .+....++++.+. ...+..++++++++. .
T Consensus 73 ~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 146 (328)
T 3kzh_A 73 SIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIAD-MKSIGAMNTDFIDSKREIFENAEYTVLDSD-----N 146 (328)
T ss_dssp HHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHHHTHHHHHTCSEEEEESS-----C
T ss_pred HHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEc-hhhhhhCCHHHHHHHHHhhccCCEEEEeCC-----c
Confidence 3688999999999998888888999999999999999886542 3444456665554 256789999998763 2
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--CchHHHHHHhcC
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFH 156 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~~l~~ 156 (260)
+ +.+..+++ +++.+.++++||.+ ......+.++++++|++++|.+|++.++|.... ++...+++.|.+
T Consensus 147 ~-~~~~~l~~-a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 216 (328)
T 3kzh_A 147 P-EIMEYLLK-NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLG 216 (328)
T ss_dssp H-HHHHHHHH-HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHH
T ss_pred H-HHHHHHHH-HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
Confidence 3 56666776 78889999999962 222344667889999999999999999997643 234456788888
Q ss_pred CCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 157 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 157 ~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
.|++.|+||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.+|+
T Consensus 217 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~ 289 (328)
T 3kzh_A 217 LGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITIS 289 (328)
T ss_dssp HTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred hCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 89999999999999999998888899998899999999999999999999999999 99999999999999999
Q ss_pred hcCCCCCCCCHHHHHHHHhhcc
Q 024908 237 ERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 237 ~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+.|+.++.|++++++++++++.
T Consensus 290 ~~G~~~~~~~~~~v~~~~~~~~ 311 (328)
T 3kzh_A 290 HEETIHPDMALDTVLAKLEKTT 311 (328)
T ss_dssp SSSSSCTTCSHHHHHHHHHTCC
T ss_pred CCCCCCCcCCHHHHHHHhhhcc
Confidence 9999999999999999998764
No 21
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.6e-36 Score=256.86 Aligned_cols=246 Identities=20% Similarity=0.237 Sum_probs=200.2
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEE-eeCCcccccccccccchh-hhcCccEEEEccccC-CCc
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLF-FRHPSADMLLCESELDKN-LIKQGSIFHYGSISL-IAE 77 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~d~v~~~~~~~-~~~ 77 (260)
++++.|++.||+++++.+ .+.+|+++++..+.++++.++. .+...+...++++++... .++++|++|++++.+ ..+
T Consensus 75 ~i~~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 153 (351)
T 2afb_A 75 AAAGHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGK 153 (351)
T ss_dssp HHHHHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGST
T ss_pred HHHHHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccCh
Confidence 368899999999999986 5678999988766534444443 333334455666666543 468999999988654 345
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC-----------Cc
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH-----------ND 146 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~-----------~~ 146 (260)
.+.+.+..+++.+++.+.++++||+.+..+|. .......+.++++++|++++|..|+..|+|.... ++
T Consensus 154 ~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~ 232 (351)
T 2afb_A 154 ELPLILEDALKVANEKGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREA 232 (351)
T ss_dssp THHHHHHHHHHHHHHHTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhh
Confidence 56688889999999999999999998888884 3445667788999999999999999999987642 22
Q ss_pred hHHHHHHhcCC-CCeEEEEecCCCce--------EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccH
Q 024908 147 DNVVLEKLFHP-NLKLLIVTEGSKGC--------RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 217 (260)
Q Consensus 147 ~~~~~~~l~~~-g~~~vivt~G~~G~--------~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~ 217 (260)
..++++.|.+. |++.|+||+|.+|+ +++.++..+++|+++++++|||||||+|+|||+++|++|++
T Consensus 233 ~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~----- 307 (351)
T 2afb_A 233 YAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD----- 307 (351)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-----
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-----
Confidence 34566777774 99999999999975 66777777888998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHhhhcCCCCCCCCHHHHHHHHhh
Q 024908 218 NRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 256 (260)
Q Consensus 218 ~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~ 256 (260)
+++|+++|+++|+.++++.|+.+ +|+.+++++++++
T Consensus 308 --l~~a~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 308 --SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp --HHHHHHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 99999999999999999999975 8999999999875
No 22
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=6.2e-37 Score=255.54 Aligned_cols=226 Identities=24% Similarity=0.358 Sum_probs=191.6
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhHH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 81 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 81 (260)
+++.|++.||+++++.+.++.+|++++++++.+|+++++.+ .+++..+++++++. ++++++|+++.. + +
T Consensus 74 i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~---~~~~~v~~~~~~-----~-~ 142 (302)
T 2c4e_A 74 YERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFL--WGAAKHYKELNPPN---FNTEIVHIATGD-----P-E 142 (302)
T ss_dssp HHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEE--CGGGGGGGGCCCCC---CCEEEEEECSSC-----H-H
T ss_pred HHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEe--CChhhhCCHhhcCc---ccCCEEEEeCCC-----c-H
Confidence 68899999999999887777789999999988899988776 34555567666654 689999987631 2 6
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCeE
Q 024908 82 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKL 161 (260)
Q Consensus 82 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~ 161 (260)
.+..+++.+++.+ ++++||+.+...|. ...+.++++++|++++|.+|++.++|....+.. .|++. ++.
T Consensus 143 ~~~~~~~~a~~~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~~~-~~~ 210 (302)
T 2c4e_A 143 FNLKCAKKAYGNN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID-----DYLER-VDA 210 (302)
T ss_dssp HHHHHHHHHBTTB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH-----HHHTT-CSE
T ss_pred HHHHHHHHHHhcC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH-----HHHhc-CCE
Confidence 7888899999989 99999985544342 345677889999999999999999876544321 56667 899
Q ss_pred EEEecCCCceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcCC
Q 024908 162 LIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240 (260)
Q Consensus 162 vivt~G~~G~~~~~~~~~~~~~~~~~~-~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~ 240 (260)
|+||+|++|++++.++..+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 211 vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~ 283 (302)
T 2c4e_A 211 LIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGC 283 (302)
T ss_dssp EEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSS
T ss_pred EEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccc
Confidence 999999999999988888899999888 999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhc
Q 024908 241 IPALPTKEAALKLLHTV 257 (260)
Q Consensus 241 ~~~~~~~~~l~~~~~~~ 257 (260)
...+|+.+++++++++.
T Consensus 284 ~~~~p~~~ev~~~~~~~ 300 (302)
T 2c4e_A 284 QTNLPTWDKVVERLEKH 300 (302)
T ss_dssp STTCCCHHHHHHHHHHC
T ss_pred cccCCCHHHHHHHHHhc
Confidence 88899999999998764
No 23
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=3.3e-36 Score=256.19 Aligned_cols=248 Identities=17% Similarity=0.188 Sum_probs=197.1
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccc-hhhhcCccEEEEccccC-CCch
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEP 78 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~-~~~~ 78 (260)
++++.|+++||+++++.+.++.+|..++...+..+++.+.+++...+.......++. ...+++++++|++++.+ ..+.
T Consensus 87 ~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~ 166 (351)
T 4gm6_A 87 MAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTF 166 (351)
T ss_dssp HHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHH
T ss_pred HHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchh
Confidence 368899999999999988877667666666666677888877665555445555554 45788999999998765 4566
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCC-chHHHHHHhcC-
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN-DDNVVLEKLFH- 156 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~-~~~~~~~~l~~- 156 (260)
+.+.+..+++.|++.|+++++||+.|+.+|. .+...+.+.++++++|++++|++|+..++|..... +..........
T Consensus 167 ~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~ 245 (351)
T 4gm6_A 167 WLEMVVKIIREAKRNGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPN 245 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhh
Confidence 7889999999999999999999999999994 66778888999999999999999999999876433 22222222221
Q ss_pred ----CCCeEEEEecCC--CceEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHH
Q 024908 157 ----PNLKLLIVTEGS--KGCRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANA 229 (260)
Q Consensus 157 ----~g~~~vivt~G~--~G~~~~~~~~~~~~~~~~~-~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~ 229 (260)
.+.+.++++.+. .+..++..++.++.+++++ +++|||||||+|+|||+++|++|++ +++|+++|++
T Consensus 246 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~a 318 (351)
T 4gm6_A 246 IELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATA 318 (351)
T ss_dssp CCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred hhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHH
Confidence 234455666554 3566777887788877765 8999999999999999999999999 9999999999
Q ss_pred HhhHHhhhcCCCCCCCCHHHHHHHHhhc
Q 024908 230 CGALTVTERGAIPALPTKEAALKLLHTV 257 (260)
Q Consensus 230 ~Aa~~~~~~g~~~~~~~~~~l~~~~~~~ 257 (260)
+||++|++.|+.+.+| .+++++++.+.
T Consensus 319 aaal~v~~~Ga~~~~~-~~ev~~~l~~~ 345 (351)
T 4gm6_A 319 AAGLKHSIHGDINPFD-EKTIADFAADK 345 (351)
T ss_dssp HHHHHTTSSSSSCCCC-HHHHHHHHHC-
T ss_pred HHHHHhCCCCCCCCCC-HHHHHHHHhCC
Confidence 9999999999997765 68899988754
No 24
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=5.1e-36 Score=250.72 Aligned_cols=216 Identities=21% Similarity=0.217 Sum_probs=187.8
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++... +.+|++++++++++|+++++.+ .+++..++ ++ ...++++|++++++. .+.
T Consensus 87 ~i~~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~--~~-~~~l~~~~~v~~~~~-----~~~ 155 (310)
T 3go6_A 87 QLRAHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVA--PGANAHLT--PV-PSAVANCDVLLTQLE-----IPV 155 (310)
T ss_dssp HHHHHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEE--CGGGGGCC--CC-TTTTTTCSEEEECSS-----SCH
T ss_pred HHHHHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEec--CChhhhHH--HH-HHHhhcCCEEEECCC-----CCH
Confidence 3688999999999999654 5699999999999999999887 34554455 44 567889999998752 346
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
+.+..+++.+++.+.++++||+++.. ....+..+++++|++++|.+|++.++|. ++
T Consensus 156 ~~~~~~~~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----------------~~ 211 (310)
T 3go6_A 156 ATALAAARAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP-----------------PT 211 (310)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----------------CS
T ss_pred HHHHHHHHHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC-----------------CC
Confidence 78888999999999999999985543 2456678899999999999999999874 67
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh----cCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA----DQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~----g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
.|+||+|++|++++.+++.+++|+++++++||+||||+|+|||+++|++ |++ +++|+++|+++|+.+|+
T Consensus 212 ~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~ 284 (310)
T 3go6_A 212 HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATL 284 (310)
T ss_dssp EEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhC
Confidence 8999999999999999888999999999999999999999999999999 998 99999999999999999
Q ss_pred hcCCCCCCCCHHHHHHHHhhcc
Q 024908 237 ERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 237 ~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+.|+.+++|+++|+++++++.+
T Consensus 285 ~~G~~~~~p~~~ev~~~l~~~~ 306 (310)
T 3go6_A 285 VSGVGDCAPAAAAIDAALRANR 306 (310)
T ss_dssp SSCSTTCCCCHHHHHHHHHTC-
T ss_pred CCCCCCCCCCHHHHHHHHHhcc
Confidence 9999988999999999998765
No 25
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=3.8e-37 Score=263.55 Aligned_cols=233 Identities=13% Similarity=0.175 Sum_probs=194.4
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch----hhhcCccEEEEccccCCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIA 76 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~v~~~~~~~~~ 76 (260)
++++.|++.||+++++.+.++.+|++++++++ +|+|+++.+ .+++..++++++.. ..+++++++|++++.+.
T Consensus 115 ~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~l~~~~~~~~~~~~~~~~~~~v~~~g~~~~- 190 (370)
T 3vas_A 115 YIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVIN- 190 (370)
T ss_dssp HHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHH-
T ss_pred HHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhhCCHHHcCchhhHHHHhhCCEEEEEeeecc-
Confidence 37889999999999987757779999999998 899999876 45666688777764 56789999999987553
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCC--CCchHHHHHHh
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--HNDDNVVLEKL 154 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~--~~~~~~~~~~l 154 (260)
.+.+.+..+++.+++.|+++++|+..+. | .....+.+.++++++|++++|+.|++.++|... .++...+++.|
T Consensus 191 -~~~~~~~~~~~~a~~~g~~v~ld~~~~~--~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l 265 (370)
T 3vas_A 191 -TCYEGMLKIAKHSLENEKLFCFNLSAPF--L--SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYI 265 (370)
T ss_dssp -HHHHHHHHHHHHHHHTTCEEEEECCCHH--H--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEECCcHH--H--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHH
Confidence 4678899999999999999999985221 1 122345677899999999999999999987632 24455577777
Q ss_pred cCC-------CCeEEEEecCCCceEEEe--cCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHH
Q 024908 155 FHP-------NLKLLIVTEGSKGCRYYT--KEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLRE 222 (260)
Q Consensus 155 ~~~-------g~~~vivt~G~~G~~~~~--~~~~~~~~~~~~---~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~ 222 (260)
.+. +++.||||+|++|++++. ++..+++|++++ +++||+||||+|+|||+++|++|++ +++
T Consensus 266 ~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~~ 338 (370)
T 3vas_A 266 ADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP-------MIT 338 (370)
T ss_dssp HHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCC-------HHH
T ss_pred HhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCC-------HHH
Confidence 764 999999999999999998 778888988876 8999999999999999999999999 999
Q ss_pred HHHHHHHHhhHHhhhcCCCCCCCCHHHHH
Q 024908 223 ALLFANACGALTVTERGAIPALPTKEAAL 251 (260)
Q Consensus 223 a~~~a~~~Aa~~~~~~g~~~~~~~~~~l~ 251 (260)
|+++|+++|+.+|++.|+. +|+.+++.
T Consensus 339 a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 339 SLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp HHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred HHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 9999999999999999985 56776654
No 26
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2e-36 Score=254.15 Aligned_cols=235 Identities=21% Similarity=0.158 Sum_probs=190.3
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch----hhhcCccEEEEccccCCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIA 76 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~v~~~~~~~~~ 76 (260)
++++.|++.||++++ ...++.+|++++++++++|++++.+++. +.+..++++.+.. ..+..++++++++.
T Consensus 70 ~l~~~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 143 (317)
T 2nwh_A 70 VVAEAARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADM-DLYKLFTPRRLKVRAVREAIIASDFLLCDAN---- 143 (317)
T ss_dssp HHHHHHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEEC-GGGGGCCHHHHTSHHHHHHHHHCSEEEEETT----
T ss_pred HHHHHHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcch-HHHhhCCHHHhhhhhhhhHhccCCEEEEeCC----
Confidence 367899999999998 5566779999999999899998776532 3344466555442 45778999988652
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcC
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFH 156 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~ 156 (260)
.+.+.+..+++.+++.+.++++||.. . .....+.++++++|++++|.+|++.++|.. .++...+++.|.+
T Consensus 144 -~~~~~~~~~~~~a~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~-~~~~~~~~~~l~~ 213 (317)
T 2nwh_A 144 -LPEDTLTALGLIARACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGET-AENVRDWPNILRK 213 (317)
T ss_dssp -SCHHHHHHHHHHHHHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC------CTTHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCC-hhHHHHHHHHHHH
Confidence 24578888999999999999999962 1 122345678899999999999999999872 2222335678888
Q ss_pred CCCeEEEEecCCCceEEEecC-ceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHh
Q 024908 157 PNLKLLIVTEGSKGCRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTV 235 (260)
Q Consensus 157 ~g~~~vivt~G~~G~~~~~~~-~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~ 235 (260)
.|++.|+||+|++|+++++++ ..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++
T Consensus 214 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v 286 (317)
T 2nwh_A 214 AGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITV 286 (317)
T ss_dssp TTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 899999999999999998766 45788888889999999999999999999999999 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHhhcc
Q 024908 236 TERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 236 ~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++.|+.+.+|+.+++++++...+
T Consensus 287 ~~~G~~~~~~~~~~v~~~~~~~~ 309 (317)
T 2nwh_A 287 QSSFATSQDLSKDSVEAMLGLVP 309 (317)
T ss_dssp SSTTCCGGGCCHHHHHHHHTTSC
T ss_pred cCCCCCCCCCCHHHHHhHhhhhc
Confidence 99999988899999999766543
No 27
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=8.1e-37 Score=254.48 Aligned_cols=216 Identities=22% Similarity=0.297 Sum_probs=187.4
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hhhcCccEEEEccccCCCchh
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 79 (260)
+++.|+++||+++++. .++.+|++++++++++|+++++.+ .+++..+++++++. ..+++++++++++. .+
T Consensus 71 i~~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~-----~~ 142 (299)
T 3ikh_A 71 IRQQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGN-----FS 142 (299)
T ss_dssp HHHHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSC-----SC
T ss_pred HHHHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCC-----CC
Confidence 6889999999999884 567799999999998999998876 45655677776653 46789999998863 24
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
.+.+..+++.+++.+.++++||+... ..+.++++++|++++|.+|++.++| .|+
T Consensus 143 ~~~~~~~~~~a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g----------------~g~ 196 (299)
T 3ikh_A 143 LDKTRALFQYARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP----------------YGV 196 (299)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC----------------CSC
T ss_pred HHHHHHHHHHHHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc----------------CCC
Confidence 57888899999999999999997542 2355688999999999999999987 678
Q ss_pred eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHH-HHHHHHHhcCcccccHHHHHH-HHHHHHHHhhHHhhh
Q 024908 160 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVS-GILNCLAADQNLIKDENRLRE-ALLFANACGALTVTE 237 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~A-g~~~~l~~g~~~~~~~~~~~~-a~~~a~~~Aa~~~~~ 237 (260)
+.|+||+|++|+++++++..+++|+++++++||+||||+|+| ||+++|.+|++ +++ |+++|+++|+.++++
T Consensus 197 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 197 KTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSR 269 (299)
T ss_dssp SEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHS
T ss_pred CEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCC
Confidence 899999999999999888889999999999999999999999 99999999999 999 999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhcc
Q 024908 238 RGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~~~~~~~ 258 (260)
.|+.+++|++++++++++++.
T Consensus 270 ~G~~~~~p~~~ev~~~l~~~~ 290 (299)
T 3ikh_A 270 RGTLSAFPGSRELAALLTTDG 290 (299)
T ss_dssp SSSTTTSCCHHHHHHHHC---
T ss_pred CcccccCCCHHHHHHHHHhcc
Confidence 999988999999999998765
No 28
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=9e-36 Score=250.96 Aligned_cols=228 Identities=21% Similarity=0.287 Sum_probs=188.5
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhHH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 81 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 81 (260)
+++.|++.||+++++.+.++.+|+++++.++++|++.+.++ .++...+.++++... ++++++|+++. ..+
T Consensus 78 i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~ 147 (326)
T 3b1n_A 78 YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQ 147 (326)
T ss_dssp HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHH
T ss_pred HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHH
Confidence 57889999999999988888899999999988888877665 345555555555432 78999998753 235
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCeE
Q 024908 82 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKL 161 (260)
Q Consensus 82 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~ 161 (260)
.+..+++.+++.+.++++||+.+...|. .+.+.++++++|++++|.+|++.++|....+. +.+.+. ++.
T Consensus 148 ~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-----~~l~~~-~~~ 216 (326)
T 3b1n_A 148 GMVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSE-----DEIASR-VQA 216 (326)
T ss_dssp HHHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCH-----HHHHTT-SSE
T ss_pred HHHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCH-----HHHHhc-CCE
Confidence 7778889999999999999987665553 23456788999999999999999987543221 233443 889
Q ss_pred EEEecCCCceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcCC
Q 024908 162 LIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240 (260)
Q Consensus 162 vivt~G~~G~~~~~~~~~~~~~~~~~~-~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~ 240 (260)
|+||+|++|++++.++..+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 217 vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~ 289 (326)
T 3b1n_A 217 LIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGP 289 (326)
T ss_dssp EEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSST
T ss_pred EEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999988888889998885 789999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhc
Q 024908 241 IPALPTKEAALKLLHTV 257 (260)
Q Consensus 241 ~~~~~~~~~l~~~~~~~ 257 (260)
...+|+.+++++++++.
T Consensus 290 ~~~~~~~~ev~~~l~~~ 306 (326)
T 3b1n_A 290 QTYAPTRAEIDARFETA 306 (326)
T ss_dssp TCCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 98889999999988753
No 29
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=7.9e-36 Score=252.16 Aligned_cols=230 Identities=21% Similarity=0.212 Sum_probs=191.5
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchh--hhcCccEEEEccccCCCchh
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~v~~~~~~~~~~~~ 79 (260)
+++.|++.||+++++.+.++.+|++++++++++|++.+.++ .++...+.++++... .+++++++|+++..
T Consensus 87 i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~------ 158 (334)
T 2pkf_A 87 YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAIGKPELVIIGAND------ 158 (334)
T ss_dssp HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEE--CGGGGGGGGCCHHHHHHHHCSCSEEEEESCC------
T ss_pred HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEEC--CchhhhCCHhhcChhhhhhcCCCEEEEcCCC------
Confidence 57889999999999988878899999999988888888766 345555666666543 35899999987642
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
.+.+..+++.+++.+.++++||+.+..+|. .+.+.++++++|++++|.+|++.++|....+. +.+.+. +
T Consensus 159 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~-----~~l~~~-~ 227 (334)
T 2pkf_A 159 PEAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSE-----ADVMAQ-I 227 (334)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCH-----HHHHTT-C
T ss_pred hHHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCCH-----HHHHhc-C
Confidence 357778888999999999999987766663 23456789999999999999999987543221 234444 8
Q ss_pred eEEEEecCCCceEEEecCc-eeeecCcccc-cccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 160 KLLIVTEGSKGCRYYTKEF-KGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~-~~~~~~~~~~-~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
+.|+||+|++|++++.++. .+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 228 ~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 228 DLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLES 300 (334)
T ss_dssp SCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred CEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhC
Confidence 8999999999999998876 8889998886 789999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhc
Q 024908 238 RGAIPALPTKEAALKLLHTV 257 (260)
Q Consensus 238 ~g~~~~~~~~~~l~~~~~~~ 257 (260)
.|+...+|+.++++++++++
T Consensus 301 ~G~~~~~p~~~ev~~~l~~~ 320 (334)
T 2pkf_A 301 TGTQEWQWDYEAAASRLAGA 320 (334)
T ss_dssp SSSSCCCCCHHHHHHHHHHH
T ss_pred CCCCcCCCCHHHHHHHHHHH
Confidence 99998899999999988754
No 30
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.6e-36 Score=248.64 Aligned_cols=229 Identities=24% Similarity=0.277 Sum_probs=183.1
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhHH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 81 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 81 (260)
+++.|++.|| +++.+.++.+|+++++.++++|++++.++.. .....+...+.....++++|++|++++....+.+.+
T Consensus 56 ~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~ 132 (296)
T 2qhp_A 56 IMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRA 132 (296)
T ss_dssp HHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHH
T ss_pred HHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHH
Confidence 6789999999 7787777789999999888889888876532 222234333333456789999999987666666788
Q ss_pred HHHHHHHHHHH-CCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC--CCCchHHHHHHhcC-C
Q 024908 82 TQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFH-P 157 (260)
Q Consensus 82 ~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~--~~~~~~~~~~~l~~-~ 157 (260)
.+..+++.+++ .+.++++||+.+...|. .+.+.++++++|++++|.+|++.++|.. +.++..++++.+.+ .
T Consensus 133 ~~~~~~~~a~~~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~ 207 (296)
T 2qhp_A 133 TINRFLDTMPDIDGQLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKY 207 (296)
T ss_dssp HHHHHHHHSCCTTSCEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhc
Confidence 88899988887 68999999988777663 2456678899999999999999998743 22344456677777 4
Q ss_pred CCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 158 NLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 158 g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
|++.|+||+|++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 208 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~ 280 (296)
T 2qhp_A 208 NLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQ 280 (296)
T ss_dssp TCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988888899998899999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCC
Q 024908 238 RGAIPALP 245 (260)
Q Consensus 238 ~g~~~~~~ 245 (260)
.|+.+.+|
T Consensus 281 ~G~~~~~~ 288 (296)
T 2qhp_A 281 SGAMPELP 288 (296)
T ss_dssp SSSSCCCC
T ss_pred CCCCCCCc
Confidence 99986544
No 31
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=5.4e-36 Score=256.05 Aligned_cols=224 Identities=17% Similarity=0.191 Sum_probs=184.3
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch----hhhcCccEEEEccccCCCc
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIAE 77 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~v~~~~~~~~~~ 77 (260)
+++.|++.||+++++.+ ++.+|++++++++ +++|+++.+ .++...++++++.. ..+++++++|++++.+.
T Consensus 115 ~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~~v~i~G~~~~-- 188 (365)
T 3loo_A 115 LEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFT-- 188 (365)
T ss_dssp HHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHCSEEEEEGGGHH--
T ss_pred HHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhCCEEEEeeeecc--
Confidence 68899999999999877 6779999999988 788888876 56666788877763 56789999999987553
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC--CCCchHHHHHHhc
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLF 155 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~--~~~~~~~~~~~l~ 155 (260)
.+.+.+..+++.+++.|+++++|+..+.. .....+.+.++++++|++++|+.|++.++|.. +.++...+++.|.
T Consensus 189 ~~~~~~~~~~~~a~~~g~~v~~d~~~~~~----~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~ 264 (365)
T 3loo_A 189 VSFESALSVAKEAAATGRMFMMNLSAPFV----PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIA 264 (365)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCSTHH----HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCchhh----hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHHHH
Confidence 45678899999999999999999863211 12335667889999999999999999998753 2344455677787
Q ss_pred CC------CCeEEEEecCCCceEEE--ecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHH
Q 024908 156 HP------NLKLLIVTEGSKGCRYY--TKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREAL 224 (260)
Q Consensus 156 ~~------g~~~vivt~G~~G~~~~--~~~~~~~~~~~~~---~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~ 224 (260)
+. +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|+|||+++|.+|++ +++|+
T Consensus 265 ~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~ 337 (365)
T 3loo_A 265 ALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT-------VDVCI 337 (365)
T ss_dssp TSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCC-------HHHHH
T ss_pred hhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCC-------HHHHH
Confidence 64 89999999999999999 7778888988887 8999999999999999999999999 99999
Q ss_pred HHHHHHhhHHhhhcCCCC
Q 024908 225 LFANACGALTVTERGAIP 242 (260)
Q Consensus 225 ~~a~~~Aa~~~~~~g~~~ 242 (260)
++|+++|+.++++.|+..
T Consensus 338 ~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 338 KCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp HHHHHHHHHHHHHGGGGG
T ss_pred HHHHHHHHHHHcCCCCCC
Confidence 999999999999999863
No 32
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=6.9e-36 Score=253.86 Aligned_cols=224 Identities=17% Similarity=0.196 Sum_probs=183.3
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch----hhhcCccEEEEccccCCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIA 76 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~v~~~~~~~~~ 76 (260)
++++.|++.||+++++. .++.+|++++++++ +|+|+++.+ .++...++++++.. ..+++++++|++++.+.
T Consensus 100 ~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~- 174 (347)
T 3otx_A 100 VLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLT- 174 (347)
T ss_dssp HHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGGG-
T ss_pred HHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHhhCCEEEEeeeecc-
Confidence 36889999999999985 56779999999988 899998776 45666677777763 56789999999987553
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC--CCCchHHHHHHh
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKL 154 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~--~~~~~~~~~~~l 154 (260)
.+.+.+..+++.+++.|+++++|+..+.. .....+.+.++++++|++++|++|++.+++.. +.++...+++.|
T Consensus 175 -~~~~~~~~~~~~a~~~g~~v~~d~~~~~~----~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l 249 (347)
T 3otx_A 175 -VDVNHVLQACRKAREVDGLFMINLSAPFI----MQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRA 249 (347)
T ss_dssp -TCHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHhCCEEEeeCchhhh----HHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHHHHH
Confidence 34678899999999999999999862211 12234667889999999999999999998652 223444566777
Q ss_pred c------CCCCeEEEEecCCCceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHH
Q 024908 155 F------HPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALL 225 (260)
Q Consensus 155 ~------~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~ 225 (260)
. +.+++.||||+|++|++++.+++.+++|++++ +++|||||||+|+|||+++|.+|++ +++|++
T Consensus 250 ~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~~a~~ 322 (347)
T 3otx_A 250 VSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKD-------LRRCCE 322 (347)
T ss_dssp HHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCC-------HHHHHH
T ss_pred HhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 6 57999999999999999999888888888766 7999999999999999999999999 999999
Q ss_pred HHHHHhhHHhhhcCCC
Q 024908 226 FANACGALTVTERGAI 241 (260)
Q Consensus 226 ~a~~~Aa~~~~~~g~~ 241 (260)
+|+++|+.+|++.|+.
T Consensus 323 ~a~~~aa~~v~~~G~~ 338 (347)
T 3otx_A 323 TGHYTAQEVIQRDGCS 338 (347)
T ss_dssp HHHHHHHHHHTCC---
T ss_pred HHHHHHHHHHcccCCC
Confidence 9999999999999975
No 33
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.6e-35 Score=249.96 Aligned_cols=229 Identities=14% Similarity=0.151 Sum_probs=185.2
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch------hhhcCccEEEEccccC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISL 74 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~v~~~~~~~ 74 (260)
++++.|++.||+++++.+.++ |++++++++++ ++.++.. .++. +++++++. ..++++|++|+++...
T Consensus 86 ~l~~~L~~~gV~~~~v~~~~~--t~~~~~~v~~~-~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 158 (330)
T 2jg1_A 86 FIAKKLDHADIKHAFYNIKGE--TRNCIAILHEG-QQTEILE--QGPE--IDNQEAAGFIKHFEQMMEKVEAVAISGSLP 158 (330)
T ss_dssp HHHHHHHHTTCEECCEEESSC--CEEEEEEEETT-EEEEEEE--CCCB--CCHHHHHHHHHHHHHHGGGCSEEEEESCCC
T ss_pred HHHHHHHHCCCceeEEEccCC--CeeEEEEEeCC-CcEEEEC--CCCC--CCHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 368899999999999877654 66777777765 5544332 3332 55544432 2367899999877544
Q ss_pred CCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh---hCCEEecCHHHHhhhcCCCCC---CchH
Q 024908 75 IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVSDDEITFLTGGDDH---NDDN 148 (260)
Q Consensus 75 ~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~E~~~l~g~~~~---~~~~ 148 (260)
. +.+.+.+..+++.+++.|+++++||+ +. .+.++++ ++|++++|.+|++.++|.... ++..
T Consensus 159 ~-~~~~~~~~~~~~~a~~~g~~v~~D~~--------~~----~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 225 (330)
T 2jg1_A 159 K-GLNQDYYAQIIERCQNKGVPVILDCS--------GA----TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLK 225 (330)
T ss_dssp B-TSCTTHHHHHHHHHHTTTCCEEEECC--------HH----HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHCCCEEEEECC--------cH----HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHH
Confidence 3 33456788899999999999999995 22 3455666 899999999999999987532 3445
Q ss_pred HHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHH
Q 024908 149 VVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFAN 228 (260)
Q Consensus 149 ~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~ 228 (260)
++++.|.+.|++.|+||+|++|+++++++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+
T Consensus 226 ~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~ 298 (330)
T 2jg1_A 226 QAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKAN 298 (330)
T ss_dssp HHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 5778888899999999999999999988888889998899999999999999999999999999 999999999
Q ss_pred HHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 229 ACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 229 ~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++|+.++++.|+. +|+.+++++++++++
T Consensus 299 a~aa~~v~~~G~~--~~~~~ev~~~~~~i~ 326 (330)
T 2jg1_A 299 TLGMLNAQEAQTG--YVNLNNYDDLFNQIE 326 (330)
T ss_dssp HHHHHHHTSSSSS--CCCGGGHHHHHTTCE
T ss_pred HHHHHHhcCcCCC--CCCHHHHHHHHhceE
Confidence 9999999999984 689999999998765
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=4.8e-35 Score=246.05 Aligned_cols=228 Identities=23% Similarity=0.264 Sum_probs=186.6
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCc--eeEEEeeCCcccccccccccch------hhhcCccEEEEccc
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSI 72 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~v~~~~~ 72 (260)
++++.|++.||+++++...++ +|++++++++ +|+ ++++.. .++ .+++++++. ..++++|++|++++
T Consensus 69 ~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 142 (320)
T 3ie7_A 69 KLYAILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGS 142 (320)
T ss_dssp HHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESC
T ss_pred HHHHHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 368899999999999855555 8999999888 788 777544 332 356555542 46789999999875
Q ss_pred cCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhhcCCCCCCchHHHH
Q 024908 73 SLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDHNDDNVVL 151 (260)
Q Consensus 73 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~g~~~~~~~~~~~ 151 (260)
.. ...+.+.+..+++.+++.|+++++||. .. .+.+.+. ++|++++|.+|++.++|........ .+
T Consensus 143 ~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~--------~~----~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~-~~ 208 (320)
T 3ie7_A 143 PP-PHYTLSDFKELLRTVKATGAFLGCDNS--------GE----YLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEE-NI 208 (320)
T ss_dssp CC-TTCCHHHHHHHHHHHHHHTCEEEEECC--------HH----HHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHH-HH
T ss_pred CC-CCCCHHHHHHHHHHHHhcCCEEEEECC--------hH----HHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHH-HH
Confidence 43 344568889999999999999999995 22 3444454 8999999999999999987542222 23
Q ss_pred HHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHh
Q 024908 152 EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 231 (260)
Q Consensus 152 ~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~A 231 (260)
..+.+. ++.|+||+|++|++++.+++.+++|+++++++||+||||+|+|||+++|.+|++ +++|+++|+++|
T Consensus 209 ~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~a 280 (320)
T 3ie7_A 209 RTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCS 280 (320)
T ss_dssp HHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 445555 899999999999999999989999999999999999999999999999999999 999999999999
Q ss_pred hHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 232 ALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 232 a~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+.++++.|+ ..|+.+++++++++++
T Consensus 281 a~~v~~~G~--~~~~~~ev~~~~~~~~ 305 (320)
T 3ie7_A 281 ASKVMQQDS--SSFDLEAAGKLKNQVS 305 (320)
T ss_dssp HHHHTSSSS--SCCCHHHHHHHGGGCE
T ss_pred HHHHhCcCC--CCCCHHHHHHHhhCeE
Confidence 999999994 6899999999999875
No 35
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=8.2e-36 Score=251.79 Aligned_cols=228 Identities=25% Similarity=0.335 Sum_probs=192.7
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hhhcCccEEEEccccCCCchh
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 79 (260)
+++.|++.||+++++.+.++.+|++++++++++|+++++.+ .+++..+++++++. ..+++++++++++. .+
T Consensus 93 l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~-----~~ 165 (331)
T 2fv7_A 93 YIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE-----IT 165 (331)
T ss_dssp HHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS-----SC
T ss_pred HHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC-----CC
Confidence 67899999999999988778899999999998899998877 34555677766653 35678999988753 23
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--CchHHHHHHhcCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHP 157 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~~l~~~ 157 (260)
.+.+..+++.+++.+.++++||..+...| ..++++++|++++|.+|++.++|.... ++..++++.|.+.
T Consensus 166 ~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~---------~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~ 236 (331)
T 2fv7_A 166 PATSLEALTMARRSGVKTLFNPAPAIADL---------DPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKR 236 (331)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCTTC---------CTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCcccccc---------hHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHc
Confidence 46788889999999999999998663322 225778999999999999999987532 3344577888899
Q ss_pred CCeEEEEecCCCceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhc--CcccccHHHHHHHHHHHHHHhhH
Q 024908 158 NLKLLIVTEGSKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--QNLIKDENRLREALLFANACGAL 233 (260)
Q Consensus 158 g~~~vivt~G~~G~~~~~~~--~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g--~~~~~~~~~~~~a~~~a~~~Aa~ 233 (260)
|++.|+||+|++|++++.++ ..+++|+++++++||+||||+|+|||+++|++| ++ +++|+++|+++|+.
T Consensus 237 g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~ 309 (331)
T 2fv7_A 237 GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAV 309 (331)
T ss_dssp TCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHH
Confidence 99999999999999998877 788899988899999999999999999999999 99 99999999999999
Q ss_pred HhhhcCCCCCCCCHHHHHH
Q 024908 234 TVTERGAIPALPTKEAALK 252 (260)
Q Consensus 234 ~~~~~g~~~~~~~~~~l~~ 252 (260)
++++.|+.+.+|+.+++++
T Consensus 310 ~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 310 SVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp HHTSSSGGGGCCCGGGSCG
T ss_pred HhCCCCCccCCCCHHHHhh
Confidence 9999999878899888754
No 36
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.1e-35 Score=247.22 Aligned_cols=225 Identities=26% Similarity=0.324 Sum_probs=188.5
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhHH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 81 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 81 (260)
+++.|++.|| ++.+.++.+|++++++++++|+++++.++ +++..+++++++...+++++++++++.. +.+
T Consensus 84 l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~ 153 (311)
T 1vm7_A 84 LIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQNEI-----PFE 153 (311)
T ss_dssp HHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHH
T ss_pred HHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEeCCC-----CHH
Confidence 6789999999 67776777999999999988999998874 5666678777766678899999987532 223
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC--CCCchHHHHHHhcCCCC
Q 024908 82 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 82 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~--~~~~~~~~~~~l~~~g~ 159 (260)
.+.. .+++.+.++++||.+... .+.++++++|++++|.+|++.++|.. +.++...+++.|.+.|+
T Consensus 154 ~~~~---~a~~~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~ 220 (311)
T 1vm7_A 154 TTLE---CAKRFNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGV 220 (311)
T ss_dssp HHHH---HHHHCCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTC
T ss_pred HHHH---HHHHcCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCC
Confidence 3333 378889999999985322 23467899999999999999998752 23344556788888999
Q ss_pred eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcC
Q 024908 160 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 239 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g 239 (260)
+.|+||+|++|++++.++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|
T Consensus 221 ~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G 293 (311)
T 1vm7_A 221 KNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLG 293 (311)
T ss_dssp SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSS
T ss_pred CEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCC
Confidence 99999999999999988888889988889999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhh
Q 024908 240 AIPALPTKEAALKLLHT 256 (260)
Q Consensus 240 ~~~~~~~~~~l~~~~~~ 256 (260)
+.+.+|+.+++++++++
T Consensus 294 ~~~~~p~~~ev~~~l~~ 310 (311)
T 1vm7_A 294 AQSSIPAREEVEAFLKN 310 (311)
T ss_dssp SGGGCCCHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHhc
Confidence 98788999999998875
No 37
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=7.3e-35 Score=243.78 Aligned_cols=231 Identities=22% Similarity=0.279 Sum_probs=187.0
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--h---hhcCccEEEEccccCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--N---LIKQGSIFHYGSISLI 75 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~d~v~~~~~~~~ 75 (260)
++++.|+++||+++++.+.+.++++.++ +.+++|+++++.+ .+++ +++++++. . .+...+++|+++.. .
T Consensus 68 ~i~~~l~~~gv~~~~v~~~~~t~~~~~~-~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~ 141 (309)
T 3umo_A 68 HLVSLLADENVPVATVEAKDWTRQNLHV-HVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESGAILVISGSL-P 141 (309)
T ss_dssp HHHHHHHHTTCCEEEEECSSCCCCCEEE-EETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHTTSCTTCEEEEESCC-C
T ss_pred HHHHHHHHcCCceEEEEecCCCeeEEEE-EECCCCcEEEEEc--CCCC--CCHHHHHHHHHHHHhcCCCCEEEEEccC-C
Confidence 3788999999999998776554444443 2334788877765 3332 55555532 1 13577899998853 3
Q ss_pred CchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhh--CCEEecCHHHHhhhcCCC--CCCchHHHH
Q 024908 76 AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ--ADIIKVSDDEITFLTGGD--DHNDDNVVL 151 (260)
Q Consensus 76 ~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~E~~~l~g~~--~~~~~~~~~ 151 (260)
.+.+.+.+..+++.+++.++++++||. ...+.+++++ +|++++|.+|++.++|.. +.++...++
T Consensus 142 ~~~~~~~~~~~~~~a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 209 (309)
T 3umo_A 142 PGVKLEKLTQLISAAQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAA 209 (309)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHH
Confidence 344568899999999999999999995 2245667777 599999999999999975 334455677
Q ss_pred HHhcCCCC-eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHH
Q 024908 152 EKLFHPNL-KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANAC 230 (260)
Q Consensus 152 ~~l~~~g~-~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 230 (260)
+.|.+.|. +.|+||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++
T Consensus 210 ~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~ 282 (309)
T 3umo_A 210 QEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAA 282 (309)
T ss_dssp HHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred HHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 88888887 89999999999999999888999999999999999999999999999999999 99999999999
Q ss_pred hhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 231 GALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 231 Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
|+.++++.|+. +|+.++++++++++.
T Consensus 283 aa~~v~~~G~~--~~~~~ev~~~l~~~~ 308 (309)
T 3umo_A 283 GSAATLNQGTR--LCSHDDTQKIYAYLS 308 (309)
T ss_dssp HHHHTTSSTTC--CCCHHHHHHHHHHHT
T ss_pred HHHHhcCCCCC--CCCHHHHHHHHHHhc
Confidence 99999999985 799999999998864
No 38
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=1.9e-34 Score=242.66 Aligned_cols=229 Identities=19% Similarity=0.182 Sum_probs=183.4
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch------hhhcCccEEEEccccC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISL 74 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~v~~~~~~~ 74 (260)
++++.|++.||+++++.+.++ |++++++++++ ++.++.. .++. +++++++. ..++++|++++++...
T Consensus 68 ~i~~~L~~~gV~~~~v~~~~~--t~~~~~~~~~~-~~~~~~~--~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 140 (323)
T 2f02_A 68 FIANELKKANIPQAFTSIKEE--TRDSIAILHEG-NQTEILE--AGPT--VSPEEISNFLENFDQLIKQAEIVTISGSLA 140 (323)
T ss_dssp HHHHHHHHTTCCBCCEEESSC--CEEEEEEEETT-EEEEEEE--CCCB--CCHHHHHHHHHHHHHHHTTCSEEEEESCCC
T ss_pred HHHHHHHHCCCceeEEEcCCC--CeeEEEEEcCC-CeEEEEC--CCCC--CCHHHHHHHHHHHHHhccCCCEEEEECCCC
Confidence 368899999999999877654 66666666665 5554332 3332 55554432 2458899999876543
Q ss_pred CCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHh---hhCCEEecCHHHHhhhcCCCCC----Cch
Q 024908 75 IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW---DQADIIKVSDDEITFLTGGDDH----NDD 147 (260)
Q Consensus 75 ~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E~~~l~g~~~~----~~~ 147 (260)
. ..+.+.+..+++.+++.+.++++||.. . .+.+++ +++|++++|.+|++.++|.... ++.
T Consensus 141 ~-~~~~~~~~~~~~~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 207 (323)
T 2f02_A 141 K-GLPSDFYQELVQKAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAV 207 (323)
T ss_dssp B-TSCTTHHHHHHHHHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHH
T ss_pred C-CCChHHHHHHHHHHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHH
Confidence 2 234567888999999999999999962 2 234455 4899999999999999987632 344
Q ss_pred HHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHH
Q 024908 148 NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 227 (260)
Q Consensus 148 ~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a 227 (260)
.++++.|.+.|++.|+||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|
T Consensus 208 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A 280 (323)
T 2f02_A 208 QTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWG 280 (323)
T ss_dssp HHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHH
Confidence 45677888899999999999999999988888889998889999999999999999999999999 99999999
Q ss_pred HHHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 228 NACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 228 ~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
+++|+.++++.|+. +|+.+++++++++++
T Consensus 281 ~~~aa~~v~~~G~~--~~~~~ev~~~~~~~~ 309 (323)
T 2f02_A 281 MAAGMANAQERMTG--HVDVENVKKHLMNIQ 309 (323)
T ss_dssp HHHHHHHHHSSSSS--CCCHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCcC--CCCHHHHHHHhhcEE
Confidence 99999999999984 689999999998764
No 39
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=1.7e-35 Score=253.48 Aligned_cols=237 Identities=14% Similarity=0.186 Sum_probs=185.4
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch----hhhcCccEEEEccccCCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIA 76 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~v~~~~~~~~~ 76 (260)
++++.|++.||+++++...++.+|+.++++++ +|+|+++.+ .++...+++++++. ..+++++++|++++.+
T Consensus 117 ~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~~~~~~g~~~-- 191 (372)
T 3uq6_A 117 YIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVI-- 191 (372)
T ss_dssp HHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGH--
T ss_pred HHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhcccEEEEecccc--
Confidence 36889999999999988888888999988875 799999887 45666677777763 4678899999998754
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--CchHHHHHHh
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKL 154 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~~l 154 (260)
+.+.+.+..+++.+++.+.++++|++.+.. .....+.+.++++++|++++|++|++.+++.... +....+++.+
T Consensus 192 ~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l 267 (372)
T 3uq6_A 192 NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYI 267 (372)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHH
Confidence 345678888999999999999999964322 1233566778899999999999999999875432 2333344444
Q ss_pred c-------CCCCeEEEEecCCCceEEEecCc----eeeecCcc-cccccCCCCchHHHHHHHHHHHhcCcccccHHHHHH
Q 024908 155 F-------HPNLKLLIVTEGSKGCRYYTKEF----KGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLRE 222 (260)
Q Consensus 155 ~-------~~g~~~vivt~G~~G~~~~~~~~----~~~~~~~~-~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~ 222 (260)
. ..+++.||||+|++|++++.++. .+.+++.+ .++||||||||+|+|||+++|.+|++ +++
T Consensus 268 ~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~-------l~~ 340 (372)
T 3uq6_A 268 ADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP-------MIT 340 (372)
T ss_dssp HHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHH
T ss_pred hhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC-------HHH
Confidence 3 25678899999999999987663 23344444 47999999999999999999999999 999
Q ss_pred HHHHHHHHhhHHhhhcCCCCCCCCHHHHHHHHh
Q 024908 223 ALLFANACGALTVTERGAIPALPTKEAALKLLH 255 (260)
Q Consensus 223 a~~~a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~ 255 (260)
|+++|+++|+.+|++.|+. +|++++++-.++
T Consensus 341 a~~~a~~aAa~vv~~~Ga~--lp~r~~~~lkln 371 (372)
T 3uq6_A 341 SLHAAVKAAAYIICRSGFS--LGSRDSYSLKIN 371 (372)
T ss_dssp HHHHHHHHHHHHHTSSSSC--CCCGGGCC----
T ss_pred HHHHHHHHHHHHHcCCCCC--CCChhHHHHHhc
Confidence 9999999999999999985 577776654443
No 40
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1.7e-34 Score=241.22 Aligned_cols=226 Identities=19% Similarity=0.259 Sum_probs=182.7
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hh---hcCccEEEEccccCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLI 75 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~d~v~~~~~~~~ 75 (260)
++++.|++.||+++++.+.++ |++++++ .+|++.++.. .++ .+++++++. .. ++++|++|+++....
T Consensus 66 ~i~~~L~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 137 (306)
T 2abq_A 66 YVRNALEKEEIGLSFIEVEGD--TRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQ 137 (306)
T ss_dssp HHHHHHHHTTCEECCEEESSC--CEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT
T ss_pred HHHHHHHHcCCceEEEEcCCC--CceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCC
Confidence 367899999999999987543 6666665 4677765432 333 355555432 11 578999998775443
Q ss_pred CchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhhcCCCCC--CchHHHHH
Q 024908 76 AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDH--NDDNVVLE 152 (260)
Q Consensus 76 ~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~ 152 (260)
..+.+.+..+++.+++.|.++++||. . ..+.++++ ++|++++|.+|++.++|.... ++..++++
T Consensus 138 -~~~~~~~~~~~~~a~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2abq_A 138 -AMPQTIYRSMTQIAKERGAFVAVDTS--------G----EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQ 204 (306)
T ss_dssp -TSCTTHHHHHHHHHHTTTCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHhcCCEEEEECC--------h----HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 33456788899999999999999995 2 23567888 999999999999999987532 33445677
Q ss_pred HhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhh
Q 024908 153 KLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGA 232 (260)
Q Consensus 153 ~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa 232 (260)
.|.+.|++.|+||+|++|++++.++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 205 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa 277 (306)
T 2abq_A 205 RLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGS 277 (306)
T ss_dssp HHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 888889999999999999999988888889998889999999999999999999999999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 233 LTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 233 ~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
.++++. ++|+.+++++++++++
T Consensus 278 ~~v~~~----~~p~~~ev~~~~~~~~ 299 (306)
T 2abq_A 278 ATAFSD----GFCTREEVERLQQQLQ 299 (306)
T ss_dssp HHHHSS----SCCCHHHHHHHHHHHT
T ss_pred HHhcCc----CCCCHHHHHHHHhhEE
Confidence 999999 4689999999998765
No 41
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=2e-34 Score=241.07 Aligned_cols=229 Identities=21% Similarity=0.242 Sum_probs=178.7
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEE-EccCCceeEEEeeCCcccccccccccch------hhhcCccEEEEcccc
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVT-LRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSIS 73 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~v~~~~~~ 73 (260)
++++.|++.||+++++.+.++ |++++++ ++++|++.++.. .++. +++++++. ..+++ |++|+++..
T Consensus 68 ~i~~~l~~~gv~~~~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~ 140 (309)
T 3cqd_A 68 HLVSLLADENVPVATVEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AILVISGSL 140 (309)
T ss_dssp HHHHHHHHTTCCEEEEECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCC
T ss_pred HHHHHHHHcCCCceeEEcCCC--CeeEEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCC
Confidence 368899999999999876654 4444455 677888765443 3332 45444431 23567 999998754
Q ss_pred CCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHH-hhhC-CEEecCHHHHhhhcCCCC--CCchHH
Q 024908 74 LIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-WDQA-DIIKVSDDEITFLTGGDD--HNDDNV 149 (260)
Q Consensus 74 ~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l~~~-dvl~~n~~E~~~l~g~~~--~~~~~~ 149 (260)
.. ..+.+.+..+++.+++.+.++++||. ... +.+. .+.+ |++++|.+|++.++|... .++..+
T Consensus 141 ~~-~~~~~~~~~~~~~a~~~g~~v~~D~~--------~~~----~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 207 (309)
T 3cqd_A 141 PP-GVKLEKLTQLISAAQKQGIRCIVDSS--------GEA----LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRK 207 (309)
T ss_dssp CT-TCCHHHHHHHHHHHHTTTCEEEEECC--------HHH----HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHH
T ss_pred CC-CCCHHHHHHHHHHHHHcCCeEEEECC--------hHH----HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHH
Confidence 33 34567888899999999999999995 222 2332 3788 999999999999998753 334445
Q ss_pred HHHHhcCCC-CeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHH
Q 024908 150 VLEKLFHPN-LKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFAN 228 (260)
Q Consensus 150 ~~~~l~~~g-~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~ 228 (260)
+++.|.+.| ++.|+||+|++|++++.++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+
T Consensus 208 ~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~ 280 (309)
T 3cqd_A 208 AAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGV 280 (309)
T ss_dssp HHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 778888889 999999999999999988888889998889999999999999999999999999 999999999
Q ss_pred HHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 229 ACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 229 ~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++|+.++++.|+. .|+.+++++++++++
T Consensus 281 ~~aa~~~~~~G~~--~~~~~~v~~~~~~~~ 308 (309)
T 3cqd_A 281 AAGSAATLNQGTR--LCSHDDTQKIYAYLS 308 (309)
T ss_dssp HHHHHHTC-------CCCHHHHHHHHHHHT
T ss_pred HHHHHHHcCcCCC--CCCHHHHHHHHHHhh
Confidence 9999999999985 689999999998875
No 42
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=3e-34 Score=243.56 Aligned_cols=223 Identities=18% Similarity=0.246 Sum_probs=183.1
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCccccccccc-ccc----hhhhcCccEEEEccccCCC
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES-ELD----KNLIKQGSIFHYGSISLIA 76 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~d~v~~~~~~~~~ 76 (260)
+++.|++.||+++++. .++.+|++++++++ +|+++++.+ .+++..++++ ++. ...++++|++|++++.+.
T Consensus 99 i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~- 173 (345)
T 1bx4_A 99 LKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLT- 173 (345)
T ss_dssp HHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHHHCSEEEEEGGGGG-
T ss_pred HHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHhhCCEEEEEEEecc-
Confidence 6889999999999886 45668999999887 788877655 4555567766 665 345678999999987553
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC--CCCchHHHHHHh
Q 024908 77 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKL 154 (260)
Q Consensus 77 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~--~~~~~~~~~~~l 154 (260)
.+.+.+..+++.+++.+.++++|+..+ .| .+...+.+.++++++|++++|.+|++.++|.. +.++...+++.|
T Consensus 174 -~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l 248 (345)
T 1bx4_A 174 -VSPESVLKVAHHASENNRIFTLNLSAP--FI--SQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKT 248 (345)
T ss_dssp -TCHHHHHHHHHHHHHTTCEEEEECCSH--HH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEeCCcH--HH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHHHHH
Confidence 345788899999999999999998521 11 12234556789999999999999999998743 234455577888
Q ss_pred cC------CCCeEEEEecCCCceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHH
Q 024908 155 FH------PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALL 225 (260)
Q Consensus 155 ~~------~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~ 225 (260)
.+ .|++.|+||+|++|++++.++..+++|++++ +++|||||||+|+|||+++|++|++ +++|++
T Consensus 249 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~ 321 (345)
T 1bx4_A 249 QALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIR 321 (345)
T ss_dssp HTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC-------HHHHHH
T ss_pred HhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCC-------HHHHHH
Confidence 87 5999999999999999998888888888776 8999999999999999999999999 999999
Q ss_pred HHHHHhhHHhhhcCCC
Q 024908 226 FANACGALTVTERGAI 241 (260)
Q Consensus 226 ~a~~~Aa~~~~~~g~~ 241 (260)
+|+++|+.++++.|+.
T Consensus 322 ~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 322 AGHYAASIIIRRTGCT 337 (345)
T ss_dssp HHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHhccCCC
Confidence 9999999999999986
No 43
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=7.3e-34 Score=237.36 Aligned_cols=226 Identities=20% Similarity=0.272 Sum_probs=180.2
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch--hh---hcCccEEEEccccCC
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLI 75 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~d~v~~~~~~~~ 75 (260)
++++.|++.||+++++.+.++ |++++.+ .+|++.++.. .++. +++++++. .. ++++|++|+++....
T Consensus 66 ~i~~~l~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 137 (306)
T 2jg5_A 66 FIIDTLNNSAIQSNFIEVDED--TRINVKL--KTGQETEINA--PGPH--ITSTQFEQLLQQIKNTTSEDIVIVAGSVPS 137 (306)
T ss_dssp HHHHHHHHTTCEECCEECSSC--CEEEEEE--ESSSEEEEEC--CCCC--CCHHHHHHHHHHHTTCCTTCEEEEESCCCT
T ss_pred HHHHHHHHCCCceeEEEcCCC--CeEEEEE--cCCCEEEEEC--CCCC--CCHHHHHHHHHHHHhccCCCEEEEeCCCCC
Confidence 368899999999999877543 6666655 4677755433 3332 55554432 11 578999998775432
Q ss_pred CchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhhcCCCCC--CchHHHHH
Q 024908 76 AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDH--NDDNVVLE 152 (260)
Q Consensus 76 ~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~g~~~~--~~~~~~~~ 152 (260)
..+.+.+..+++.+++.+.++++||. .. .+.++++ ++|++++|.+|++.++|.... ++..++++
T Consensus 138 -~~~~~~~~~~~~~a~~~g~~v~~D~~--------~~----~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2jg5_A 138 -SIPSDAYAQIAQITAQTGAKLVVDAE--------KE----LAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGR 204 (306)
T ss_dssp -TSCTTHHHHHHHHHHHHCCEEEEECC--------HH----HHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHH
T ss_pred -CCChHHHHHHHHHHHHCCCEEEEECC--------hH----HHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 23346778889999999999999985 22 3455677 599999999999999987532 23345677
Q ss_pred HhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhh
Q 024908 153 KLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGA 232 (260)
Q Consensus 153 ~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa 232 (260)
.|.+.|++.|+||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 205 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa 277 (306)
T 2jg5_A 205 LLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGT 277 (306)
T ss_dssp HHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 888899999999999999999988888889988889999999999999999999999999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 233 LTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 233 ~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
.++++.| +|+.+++++++++++
T Consensus 278 ~~v~~~G----~~~~~ev~~~~~~~~ 299 (306)
T 2jg5_A 278 ATAFDED----LATRDAIEKIKSQVT 299 (306)
T ss_dssp HHHTSSS----SCCHHHHHHHHTTCE
T ss_pred HHHcCCC----CCCHHHHHHHHhceE
Confidence 9999999 689999999998764
No 44
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.4e-34 Score=241.86 Aligned_cols=230 Identities=16% Similarity=0.147 Sum_probs=183.4
Q ss_pred CHHHHHHHCC--CCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch------hhhcCccEEEEccc
Q 024908 1 MLANILKENN--VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSI 72 (260)
Q Consensus 1 ~i~~~l~~~g--i~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~v~~~~~ 72 (260)
++++.|++.| |+++++.+.++ |++++++++++|++.+.+.. .++. +++++++. ..++++|++|+++.
T Consensus 81 ~i~~~L~~~g~~V~~~~v~~~~~--t~~~~~~v~~~g~~~~~~~~-~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~ 155 (331)
T 2ajr_A 81 ILVEELRKISKLITTNFVYVEGE--TRENIEIIDEKNKTITAINF-PGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGS 155 (331)
T ss_dssp HHHHHHHHHCTTEEEEEEEESSC--CEEEEEEEETTTTEEEEEEC-CCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHcCCccceEEEEcCCC--CeEEEEEEeCCCceEEEEeC-CCCC--CCHHHHHHHHHHHHHhcccCCEEEEECC
Confidence 3688999999 99998877654 66666777778888344432 3332 55555432 34678999999875
Q ss_pred cCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhh---CCEEecCHHH-HhhhcCCCCC--Cc
Q 024908 73 SLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ---ADIIKVSDDE-ITFLTGGDDH--ND 146 (260)
Q Consensus 73 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~---~dvl~~n~~E-~~~l~g~~~~--~~ 146 (260)
... ..+.+.+..+++.+++.|.++++||+ .. .+.+++++ +|++++|.+| ++.++|.... ++
T Consensus 156 ~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~--------~~----~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~ 222 (331)
T 2ajr_A 156 IPP-GVNEGICNELVRLARERGVFVFVEQT--------PR----LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDD 222 (331)
T ss_dssp CCT-TSCTTHHHHHHHHHHHTTCEEEEECC--------HH----HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHcCCEEEEECC--------hH----HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHH
Confidence 332 23456788899999999999999996 22 24455554 9999999999 9999887533 23
Q ss_pred hHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeec-CcccccccCCCCchHHHHHHHHHHH-hcCcccccHHHHHHHH
Q 024908 147 DNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVP-GVKTKAVDTTGAGDSFVSGILNCLA-ADQNLIKDENRLREAL 224 (260)
Q Consensus 147 ~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~-~~~~~~vdt~GaGDaf~Ag~~~~l~-~g~~~~~~~~~~~~a~ 224 (260)
...+++.|.+. ++.|+||+|++|++++.++..+++| +++++++|||||||+|+|||+++|+ +|++ +++|+
T Consensus 223 ~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al 294 (331)
T 2ajr_A 223 YVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMA 294 (331)
T ss_dssp HHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHH
T ss_pred HHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHH
Confidence 34466778777 8999999999999999888888888 8888999999999999999999999 9999 99999
Q ss_pred HHHHHHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 225 LFANACGALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 225 ~~a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
++|+++|+.++++.|+ .+|+.+++++++++++
T Consensus 295 ~~A~a~aa~~v~~~G~--~~~~~~ev~~~~~~~~ 326 (331)
T 2ajr_A 295 KFGFASALAATRRKEK--YMPDLEAIKKEYDHFT 326 (331)
T ss_dssp HHHHHHHHHHTTSSSC--CCCCHHHHHTTGGGEE
T ss_pred HHHHHHHHHHHcCcCc--CCCCHHHHHHHHhhcE
Confidence 9999999999999998 4789999999988764
No 45
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=7.8e-34 Score=241.29 Aligned_cols=224 Identities=17% Similarity=0.246 Sum_probs=177.0
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccc--hhhhcCccEEEEccccCCCch
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEP 78 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~ 78 (260)
++++.|++.||++. +...++.+|++++++++.++++..+.+ ...++.....+.+. ...++++|+++++++....
T Consensus 124 ~i~~~L~~~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~-- 199 (352)
T 4e84_A 124 RIVELLGSSGVTPH-LERDPALPTTIKLRVLARQQQLLRVDF-EAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGG-- 199 (352)
T ss_dssp HHHHHHTTTSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEE-CCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSS--
T ss_pred HHHHHHHHcCCcee-eEECCCCCCceEEEEEcCCceEEEEEc-CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCC--
Confidence 36889999999994 556677799999999887666544333 12222222222221 3567899999999764221
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCC-CCCchHHHHHHhcC-
Q 024908 79 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD-DHNDDNVVLEKLFH- 156 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~-~~~~~~~~~~~l~~- 156 (260)
.+.+..+++.+++.|+++++||+++ .| ++++++|+++||..|++.++|.. +.++..++++.|.+
T Consensus 200 -~~~~~~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~~~~~~a~~l~~~ 265 (352)
T 4e84_A 200 -LTHVTTMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAE 265 (352)
T ss_dssp -CSSHHHHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 2236778899999999999999753 22 36789999999999999999932 22334456677775
Q ss_pred CCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 157 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 157 ~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
.|++.||||+|++|+++++++..+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|+.+|+
T Consensus 266 ~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 266 LDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVG 338 (352)
T ss_dssp HTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred hCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 69999999999999999998889999999999999999999999999999999999 99999999999999999
Q ss_pred hcCCCCCCCCHHHHH
Q 024908 237 ERGAIPALPTKEAAL 251 (260)
Q Consensus 237 ~~g~~~~~~~~~~l~ 251 (260)
+.|+.+ ++.+||+
T Consensus 339 ~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 339 KLGTAT--VDYDELF 351 (352)
T ss_dssp SSSSCC--CCHHHHT
T ss_pred CCCCcc--CCHHHhc
Confidence 999975 6888875
No 46
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.9e-34 Score=237.40 Aligned_cols=214 Identities=14% Similarity=0.243 Sum_probs=174.3
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++.+.++.+|+++++++++ |+++++.+ .+++..++ +++. ++++++|+++..
T Consensus 86 ~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~--~ga~~~~~-~~l~----~~~~~v~~~~~~------- 150 (306)
T 3bf5_A 86 EYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMH--QGAMAAWA-PQLA----DEYEYVHFSTGP------- 150 (306)
T ss_dssp HHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEE--CTHHHHCC-CCCC----SCEEEEEECSSS-------
T ss_pred HHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEe--CChhhhhh-Hhhc----CCCCEEEECChH-------
Confidence 368899999999999877777789999999987 98988776 34444455 4443 689999998753
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 160 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~ 160 (260)
....+++.+++ ++++||+.+...|. .+.+.++++++|++++|.+|++.++|....++. .+.
T Consensus 151 -~~~~~~~~a~~---~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~----- 211 (306)
T 3bf5_A 151 -NYLDMAKSIRS---KIIFDPSQEIHKYS-----KDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-----KVT----- 211 (306)
T ss_dssp -SHHHHHHHCCS---EEEECCGGGGGGSC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-----SSC-----
T ss_pred -HHHHHHHHhCC---cEEEcCchhhhhcc-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-----cEE-----
Confidence 34556666664 89999974322121 345677889999999999999999876543331 121
Q ss_pred EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh--c
Q 024908 161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE--R 238 (260)
Q Consensus 161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~--~ 238 (260)
|+||+|++|++++.++..+++|+++++ +||+||||+|+|||+++|++|++ +++|+++|+++|+.++++ .
T Consensus 212 -vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~ 282 (306)
T 3bf5_A 212 -TIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIE 282 (306)
T ss_dssp -EEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCST
T ss_pred -EEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCc
Confidence 999999999999988888889998889 99999999999999999999999 999999999999999999 9
Q ss_pred CCCCCCCCHHHHHHHHhhc
Q 024908 239 GAIPALPTKEAALKLLHTV 257 (260)
Q Consensus 239 g~~~~~~~~~~l~~~~~~~ 257 (260)
|+.+.+|+.+++++++++.
T Consensus 283 G~~~~~p~~~ev~~~~~~~ 301 (306)
T 3bf5_A 283 NFSLNMEDLERETENYRRM 301 (306)
T ss_dssp TCCCCHHHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHhh
Confidence 9987889999999988754
No 47
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=2.5e-33 Score=241.08 Aligned_cols=224 Identities=19% Similarity=0.228 Sum_probs=179.6
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 80 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 80 (260)
++++.|++.||+++++. .++.+|++++++++ +|+++++.+ .+++..+++++.....+++++++|++++.+. .+.
T Consensus 122 ~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~--~~~ 195 (383)
T 2abs_A 122 VLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIFYATAYTLT--ATP 195 (383)
T ss_dssp HHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEEEEEGGGGT--TCH
T ss_pred HHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEEEEeeeccc--CCH
Confidence 36889999999999886 45678999999987 788887655 4555556665444567889999999987553 345
Q ss_pred HHHHHHHHHHHH-CCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCC--------------CC
Q 024908 81 STQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--------------HN 145 (260)
Q Consensus 81 ~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~--------------~~ 145 (260)
+.+..+++.+++ .++++++|+..+ .| .+...+.+.++++++|++++|.+|++.|+|... .+
T Consensus 196 ~~~~~~~~~a~~~~g~~v~~d~~~~--~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~ 271 (383)
T 2abs_A 196 KNALEVAGYAHGIPNAIFTLNLSAP--FC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEH 271 (383)
T ss_dssp HHHHHHHHHHHTSTTCEEEEECCCH--HH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----------CHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCcH--HH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccccccccccc
Confidence 788899999998 899999998521 11 122345567889999999999999999976431 22
Q ss_pred chHHHHHHhcC------C-CCeEEEEecCCCceEEE-----ecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhc
Q 024908 146 DDNVVLEKLFH------P-NLKLLIVTEGSKGCRYY-----TKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAAD 210 (260)
Q Consensus 146 ~~~~~~~~l~~------~-g~~~vivt~G~~G~~~~-----~~~~~~~~~~~~~---~~vdt~GaGDaf~Ag~~~~l~~g 210 (260)
+..++++.|.+ . |++.||||+|++|++++ .++..+++|++++ +++||+||||+|+|||+++|++|
T Consensus 272 ~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~~~~l~~g 351 (383)
T 2abs_A 272 AVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQG 351 (383)
T ss_dssp HHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHHHHHHHcC
Confidence 33446677765 4 89999999999999998 5556778888766 89999999999999999999999
Q ss_pred CcccccHHHHHHHHHHHHHHhhHHhhhcCCC
Q 024908 211 QNLIKDENRLREALLFANACGALTVTERGAI 241 (260)
Q Consensus 211 ~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~~ 241 (260)
++ +++|+++|+++|+.+|++.|+.
T Consensus 352 ~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 352 KT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp CC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred CC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 99 9999999999999999999986
No 48
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=3e-32 Score=228.30 Aligned_cols=236 Identities=19% Similarity=0.250 Sum_probs=179.9
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEE--EccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchh
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~ 79 (260)
+++.|+++||+++++.+.++.+|....-. .+.++++.+... .+....+.+. + ...++++|++|++++.
T Consensus 60 ~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~------ 129 (313)
T 3kd6_A 60 HFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID------ 129 (313)
T ss_dssp HHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC------
T ss_pred HHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC------
Confidence 67899999999999988877777432211 233444554433 2333333332 2 3567899999998752
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL 159 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~ 159 (260)
.+....+++.+ +.+.++++||. .+|. ....+.+.++++++|+++||.+|++.|+|..+ ...+++.|.+.|+
T Consensus 130 ~~~~~~~~~~~-~~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~ 200 (313)
T 3kd6_A 130 PELQLKVLDQI-DDPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDPN---LVKTARIIREMGP 200 (313)
T ss_dssp HHHHHHHHTTC-SSCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCSC---HHHHHHHHHTTSC
T ss_pred HHHHHHHHHHH-hhCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCCC---HHHHHHHHHHcCC
Confidence 24455666666 56788999983 1221 22355677889999999999999999999753 3446788889999
Q ss_pred eEEEEecCCCceEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 160 KLLIVTEGSKGCRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~-~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
+.|+||+|++|+++++++..+++|++++ +++||+||||+|+|||+++|++|++ .+..++++|+++|+++|+.+|++.
T Consensus 201 ~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~--~~~~~l~~a~~~a~~~aa~~v~~~ 278 (313)
T 3kd6_A 201 KTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGN--TSEAEMRKAVLYGSAMASFCVEQF 278 (313)
T ss_dssp SEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCC--ccccCHHHHHHHHHHHHHHHHeec
Confidence 9999999999999999988899999888 7999999999999999999999981 011229999999999999999999
Q ss_pred CCCCC-CCCHHHHHHHHhhcc
Q 024908 239 GAIPA-LPTKEAALKLLHTVA 258 (260)
Q Consensus 239 g~~~~-~~~~~~l~~~~~~~~ 258 (260)
|+.+. .|+++++++++++..
T Consensus 279 G~~~~~~~~~~ev~~~l~~~~ 299 (313)
T 3kd6_A 279 GPYRYNDLDLLEVDDRYQSFL 299 (313)
T ss_dssp TTGGGGTCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 99753 589999999887654
No 49
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=8.8e-32 Score=225.33 Aligned_cols=212 Identities=20% Similarity=0.264 Sum_probs=167.1
Q ss_pred CHHHHHHHCCCCCCceEEcCCCCceEEEEEEc-cCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchh
Q 024908 1 MLANILKENNVDTSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPC 79 (260)
Q Consensus 1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~ 79 (260)
++++.|+++||+++++.+.++.+|++++++++ .+|+|+++.++ ++...+++++++...+++++++|+++..
T Consensus 85 ~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~~~~~------ 156 (312)
T 2hlz_A 85 FVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHIEGRN------ 156 (312)
T ss_dssp HHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEEECSS------
T ss_pred HHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEEeccC------
Confidence 36889999999999998876667788777665 47899988774 3445577776665567889999998862
Q ss_pred HHHHHHHHHHHHHC--------CCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHH
Q 024908 80 RSTQLAAMNLAKES--------GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVL 151 (260)
Q Consensus 80 ~~~~~~~~~~a~~~--------~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~ 151 (260)
.+....+++.+++. +.++++|+... .+.+.++++++|++++|.+|++.+ |..+ ...++
T Consensus 157 ~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~~~---~~~~~ 222 (312)
T 2hlz_A 157 ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GFQS---AEEAL 222 (312)
T ss_dssp HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TCCS---HHHHH
T ss_pred HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CCCC---HHHHH
Confidence 24556677777765 67899998532 124567899999999999999987 5433 23345
Q ss_pred HHhcCCCC--eEEEEecCCCceEEEec-CceeeecCc-ccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHH
Q 024908 152 EKLFHPNL--KLLIVTEGSKGCRYYTK-EFKGRVPGV-KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 227 (260)
Q Consensus 152 ~~l~~~g~--~~vivt~G~~G~~~~~~-~~~~~~~~~-~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a 227 (260)
+.+.+.+. +.|+||+|++|++++.+ +..+++|++ .++++||+||||+|+|||+++|++|++ +++|+++|
T Consensus 223 ~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a 295 (312)
T 2hlz_A 223 RGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFG 295 (312)
T ss_dssp HHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHH
T ss_pred HHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHH
Confidence 56655332 89999999999999875 457788885 468999999999999999999999999 99999999
Q ss_pred HHHhhHHhhhcCCC
Q 024908 228 NACGALTVTERGAI 241 (260)
Q Consensus 228 ~~~Aa~~~~~~g~~ 241 (260)
+++|+.++++.|+.
T Consensus 296 ~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 296 CQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHTSSSSG
T ss_pred HHHHHHHHhhcCcc
Confidence 99999999999964
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.98 E-value=1.9e-32 Score=227.94 Aligned_cols=217 Identities=19% Similarity=0.164 Sum_probs=166.4
Q ss_pred HHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhHH
Q 024908 2 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 81 (260)
Q Consensus 2 i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 81 (260)
+++.|++.||+++++.. ..+|+...+. +.+|++++..+. +++..++++++.. .+++++|++++... +.
T Consensus 66 ~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~~--~~~~~l~~~~~~~---~~~~~v~~~~~~~~-~~--- 133 (298)
T 1vk4_A 66 KFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFLI--SAADPFTESDLAF---IEGEAVHINPLWYG-EF--- 133 (298)
T ss_dssp GGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEEE--ECCCCCCGGGGGG---CCSSEEEECCSSTT-SS---
T ss_pred HHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEec--cccccCCHHHcCc---CCCCEEEECCcccc-cc---
Confidence 56889999999998753 3466666554 556888777663 3444566666543 68999999886432 22
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCC----------CCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHH
Q 024908 82 TQLAAMNLAKESGSILSYDPNLR----------LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVL 151 (260)
Q Consensus 82 ~~~~~~~~a~~~~~~v~~d~~~~----------~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~ 151 (260)
...+++.+++.+.++++||++. ...| +.+.++++++|++++|.+|++.++|..+ ..+++
T Consensus 134 -~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~ 202 (298)
T 1vk4_A 134 -PEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDW-------EMKEKYLKYLDLFKVDSREAETLTGTND---LRESC 202 (298)
T ss_dssp -CGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCC-------TTHHHHGGGCSEEEEEHHHHHHHHSCSC---HHHHH
T ss_pred -cHHHHHHHHHcCCEEEEecCccccccccccccccch-------HHHHhhcccCCEEecCHHHHHHHhCCCC---HHHHH
Confidence 2346677788899999998621 1111 1356788999999999999999998763 33466
Q ss_pred HHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh-cCcccccHHHHHHHHHHHHHH
Q 024908 152 EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANAC 230 (260)
Q Consensus 152 ~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~ 230 (260)
+.|.+.|++.|+||+ ++|++++.+ ..+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++
T Consensus 203 ~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~ 273 (298)
T 1vk4_A 203 RIIRSFGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAV 273 (298)
T ss_dssp HHHHHTTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 788889999999999 999999877 77888888889999999999999999999999 999 99999999999
Q ss_pred hhHHhhhcCCCCCCCCHHHHH
Q 024908 231 GALTVTERGAIPALPTKEAAL 251 (260)
Q Consensus 231 Aa~~~~~~g~~~~~~~~~~l~ 251 (260)
|+.++++.|+.+. |+.+|+.
T Consensus 274 aa~~v~~~G~~~~-~~~~el~ 293 (298)
T 1vk4_A 274 TSVKMRHPGPLRR-EDLEAIS 293 (298)
T ss_dssp HHHHTTSSSSCCG-GGGGGCC
T ss_pred HHHHHccCCCCCC-CCHHHHh
Confidence 9999999999854 6766654
No 51
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.95 E-value=7.5e-27 Score=192.79 Aligned_cols=211 Identities=15% Similarity=0.133 Sum_probs=155.5
Q ss_pred HHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccch------h--hhcCccEEEEccccC
Q 024908 3 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------N--LIKQGSIFHYGSISL 74 (260)
Q Consensus 3 ~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~d~v~~~~~~~ 74 (260)
+..|++.||++.++.+ . +..+.+|.+.+. + ..++.+.+.. . .++++++++++++..
T Consensus 36 ~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~-----g--~~~~~~~~~~~~~~l~~~~~~~~~~~v~~G~l~~ 99 (283)
T 2ddm_A 36 VPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFY-----G--GAIPDEWFSGYLRALQERDALRQLRAVTTGYMGT 99 (283)
T ss_dssp HHHHHHTTCCEEEEEE--------E-EESSCTTSSCCC-----E--EECCHHHHHHHHHHHHHTTCCTTCCEEEECCCSC
T ss_pred HHHHHHcCCeeeEEeE--------E-EeccCCCcCcee-----e--eeCCHHHHHHHHHHHHhcCCcccCCEEEECCcCC
Confidence 5678999999987743 1 222445555421 1 1133333321 1 356789999976433
Q ss_pred CCchhHHHHHHHHHHHHH--CCCeEEEcCCCCC---CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC--Cch
Q 024908 75 IAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDD 147 (260)
Q Consensus 75 ~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~--~~~ 147 (260)
....+.+.++++.+++ .++++++||..+. ..|.+..........+++++|+++||..|++.|+|.... ++.
T Consensus 100 --~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~ 177 (283)
T 2ddm_A 100 --ASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSA 177 (283)
T ss_dssp --HHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSHHHH
T ss_pred --HHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCHHHH
Confidence 3456788888888887 7899999998664 445333233334456889999999999999999997533 234
Q ss_pred HHHHHHhcCCCCeEEEEecCCC-------ceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHH
Q 024908 148 NVVLEKLFHPNLKLLIVTEGSK-------GCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRL 220 (260)
Q Consensus 148 ~~~~~~l~~~g~~~vivt~G~~-------G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~ 220 (260)
.++++.|.+.|++.|+||.|.+ |+++++++..+++++++++ +||+||||+|+|+|+++|++|++ +
T Consensus 178 ~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g~~-------~ 249 (283)
T 2ddm_A 178 IAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKGKA-------L 249 (283)
T ss_dssp HHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTTCC-------H
T ss_pred HHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcCCC-------H
Confidence 4577889999999999999999 8888888777788887775 89999999999999999999999 9
Q ss_pred HHHHHHHHHHhhHHhhhcC
Q 024908 221 REALLFANACGALTVTERG 239 (260)
Q Consensus 221 ~~a~~~a~~~Aa~~~~~~g 239 (260)
++|+++|+++++.++++..
T Consensus 250 ~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 250 TDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998754
No 52
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.93 E-value=2.6e-25 Score=186.02 Aligned_cols=166 Identities=17% Similarity=0.122 Sum_probs=127.6
Q ss_pred hcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCe--EEEcCCCCCC------CCCCHHHHHHHHHH-HhhhCCEEecC
Q 024908 61 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI--LSYDPNLRLP------LWPSEEAAREGIMS-IWDQADIIKVS 131 (260)
Q Consensus 61 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--v~~d~~~~~~------~~~~~~~~~~~~~~-~l~~~dvl~~n 131 (260)
++++++++++.+. .+...+.+..+++.+++.|.+ +++||..+.. +|.. ......+.+ +++++|+++||
T Consensus 74 ~~~~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 74 MNKYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp CCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSEECCC
T ss_pred CccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCEEcCC
Confidence 5678998876532 334466777888989887754 8899976533 3432 233445554 89999999999
Q ss_pred HHHHhhhcCCCCC--CchHHHHHHhcCCCCeEEEEecCCC------ceEEE-------ec-C----ceeeecCccccccc
Q 024908 132 DDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK------GCRYY-------TK-E----FKGRVPGVKTKAVD 191 (260)
Q Consensus 132 ~~E~~~l~g~~~~--~~~~~~~~~l~~~g~~~vivt~G~~------G~~~~-------~~-~----~~~~~~~~~~~~vd 191 (260)
..|++.|+|.... ++...+++.|++.|++.|+||.|.. |++++ .+ + ..++++++++++ |
T Consensus 151 ~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-d 229 (312)
T 2yxt_A 151 QFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-V 229 (312)
T ss_dssp HHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-C
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-C
Confidence 9999999997532 3344567788888999999998876 46665 44 2 567778777776 9
Q ss_pred CCCCchHHHHHHHHHHHh-cCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 192 TTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 192 t~GaGDaf~Ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
|+||||+|+|||+++|++ |++ +++|+++|+++|+.++++
T Consensus 230 ttGAGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 230 FVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp CSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 999 999999999999888864
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.91 E-value=2.7e-23 Score=171.83 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=124.7
Q ss_pred ccEEEEccccCCCchhHHHHHHHHHHHHHCCCe-EEEcCCCCC----CCCCCHHHHHHHHH-HHhhhCCEEecCHHHHhh
Q 024908 64 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVSDDEITF 137 (260)
Q Consensus 64 ~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~ 137 (260)
+|+++++.+. +.+.+..+++.+++.+.+ +++||..+. .+|. . .....+. .+++++|+++||..|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~-~-~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS-P-SAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC-H-HHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC-H-HHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6888877532 356788888999998986 999998764 2342 2 2223344 378999999999999999
Q ss_pred hcCC-CCC--CchHHHHHHhcCCCCeEEEEecCCCc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 024908 138 LTGG-DDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 209 (260)
Q Consensus 138 l~g~-~~~--~~~~~~~~~l~~~g~~~vivt~G~~G-----~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~ 209 (260)
|+|. ... ++..++++.|.+.|++.|+||.|.+| +++++++..+++++++++++||+||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 432 23445678888899999999999999 888887777888888889999999999999999999999
Q ss_pred cCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 210 DQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 210 g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
|++ +++|+++|+++++.++++.
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999776
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.91 E-value=3.8e-23 Score=168.28 Aligned_cols=162 Identities=19% Similarity=0.160 Sum_probs=126.9
Q ss_pred CccEEEEccccCCCchhHHHHHHHHHHHHHCC-CeEEEcCCCCCC----CCCCHHHHHHHH-HHHhhhCCEEecCHHHHh
Q 024908 63 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP----LWPSEEAAREGI-MSIWDQADIIKVSDDEIT 136 (260)
Q Consensus 63 ~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~----~~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~ 136 (260)
+.+.++++.+ . +.+.+..+++.+++.+ .++++||..+.. +|. . .....+ .++++++|+++||..|++
T Consensus 70 ~~~~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~-~-~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGAL--G---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA-K-EAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCC--C---SHHHHHHHHHHHHHTTCCSEEECCCC---------C-H-HHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCc--C---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC-h-HHHHHHHHhhcccCeEEeCCHHHHH
Confidence 4678877642 2 2356777788888888 899999976543 442 1 222233 467899999999999999
Q ss_pred hhcCCCCC--CchHHHHHHhcCCCCeEEEEecCCC-c----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 024908 137 FLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-G----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 209 (260)
Q Consensus 137 ~l~g~~~~--~~~~~~~~~l~~~g~~~vivt~G~~-G----~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~ 209 (260)
.|+|.... ++..++++.|.+.|++.|+||.|.+ | +++++++..+++++++++++||+||||+|+|+|+++|++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 99987533 3344577888889999999999998 8 778877777888888889999999999999999999999
Q ss_pred cCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 210 DQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 210 g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999998764
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.89 E-value=3.5e-22 Score=163.77 Aligned_cols=164 Identities=18% Similarity=0.130 Sum_probs=131.6
Q ss_pred CccEEEEccccCCCchhHHHHHHHHHHHHHCCC-eEEEcCCCCCCCCCC--HHHHHHHHH-HHhhhCCEEecCHHHHhhh
Q 024908 63 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRLPLWPS--EEAAREGIM-SIWDQADIIKVSDDEITFL 138 (260)
Q Consensus 63 ~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~~~~~~--~~~~~~~~~-~~l~~~dvl~~n~~E~~~l 138 (260)
+.|.++++.+ .. .+.+..+++.+++.+. ++++||..+...|.. .+.....+. ++++++|+++||..|++.|
T Consensus 74 ~~d~v~~G~l--~~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGML--PT---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCC--CS---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--CC---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 6788888753 22 3677778888888888 599999876654321 122233444 6789999999999999999
Q ss_pred cCCC-CC--CchHHHHHHhcCCCCeEEEEecCC--Cce----EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 024908 139 TGGD-DH--NDDNVVLEKLFHPNLKLLIVTEGS--KGC----RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 209 (260)
Q Consensus 139 ~g~~-~~--~~~~~~~~~l~~~g~~~vivt~G~--~G~----~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~ 209 (260)
+|.. .. ++..++++.|.+.|++.|+||.|. +|+ ++++++..+++++++++++||+||||+|+|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9975 32 234457788889999999999998 784 67777777888888888999999999999999999999
Q ss_pred cCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 210 DQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 210 g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999875
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.89 E-value=4.6e-22 Score=164.40 Aligned_cols=165 Identities=18% Similarity=0.093 Sum_probs=131.5
Q ss_pred cCccEEEEccccCCCchhHHHHHHHHHHHHHCC--CeEEEcCCCC----CCCCCCHHHHHHHHH-HHhhhCCEEecCHHH
Q 024908 62 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLR----LPLWPSEEAAREGIM-SIWDQADIIKVSDDE 134 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~~----~~~~~~~~~~~~~~~-~~l~~~dvl~~n~~E 134 (260)
.++|+|+.+. +......+.+.++++.+++.+ .++++||... ..+|. +...+.+. .+++++|+++||..|
T Consensus 76 ~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHHH
Confidence 5888876664 445667788999999888766 7899998432 23442 33344444 489999999999999
Q ss_pred HhhhcCCCCC--CchHHHHHHhcCCCCeEEEEecC-CCce-------EEEecCceeeecCccccc--ccCCCCchHHHHH
Q 024908 135 ITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG-SKGC-------RYYTKEFKGRVPGVKTKA--VDTTGAGDSFVSG 202 (260)
Q Consensus 135 ~~~l~g~~~~--~~~~~~~~~l~~~g~~~vivt~G-~~G~-------~~~~~~~~~~~~~~~~~~--vdt~GaGDaf~Ag 202 (260)
++.|+|.... ++...+++.|.+.|++.|+||.| .+|+ ++++++..+++++++++. +|++|+||+|+|+
T Consensus 152 ~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~ 231 (289)
T 3pzs_A 152 LEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGL 231 (289)
T ss_dssp HHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHH
Confidence 9999997643 34456788999999999999985 5776 777777777777777766 9999999999999
Q ss_pred HHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 203 ILNCLAADQNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 203 ~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
|+++|++|++ +++|+++|+++++..+++
T Consensus 232 ~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 232 LLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999998877765
No 57
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.89 E-value=2.5e-22 Score=165.94 Aligned_cols=166 Identities=18% Similarity=0.131 Sum_probs=132.2
Q ss_pred CccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCC--CCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhhc
Q 024908 63 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP--LWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 139 (260)
Q Consensus 63 ~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~--~~~-~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~ 139 (260)
..|.|.++. +.+....+.+.++++.+++.+.++++||..+.. +|. ..+...+.+.++++++|+++||..|++.|+
T Consensus 77 ~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 678888874 345556778888888877678899999987653 453 134445566789999999999999999999
Q ss_pred CCCC-----CCchHHHHHHhcCCCCeEEEEecCC-------CceEEEecC--ceeeecCcccccccCCCCchHHHHHHHH
Q 024908 140 GGDD-----HNDDNVVLEKLFHPNLKLLIVTEGS-------KGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILN 205 (260)
Q Consensus 140 g~~~-----~~~~~~~~~~l~~~g~~~vivt~G~-------~G~~~~~~~--~~~~~~~~~~~~vdt~GaGDaf~Ag~~~ 205 (260)
|... .++...+++.|.+.|++.|+||.|. .|+++++++ ..++++.+++. +|++|+||+|+|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 9763 3345567888999999999999653 577777663 45567766665 8999999999999999
Q ss_pred HHHhcCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 206 CLAADQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 206 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
+|++|++ +++|+++|+++++..+++.
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999988888763
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.88 E-value=1.2e-21 Score=161.00 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=127.5
Q ss_pred CccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCC--CCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhhc
Q 024908 63 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 139 (260)
Q Consensus 63 ~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~~~-~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~ 139 (260)
+.|.|.++.+ ......+.+.++++.. .+.++++||..+. .+|. ..+...+.+.++++++|+++||..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 6788988743 3444445555555443 3678999997774 3343 134445566789999999999999999999
Q ss_pred CCCC--CCchHHHHHHhcC-CCC-eEEEEecCC----CceEEEe-cCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 024908 140 GGDD--HNDDNVVLEKLFH-PNL-KLLIVTEGS----KGCRYYT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 210 (260)
Q Consensus 140 g~~~--~~~~~~~~~~l~~-~g~-~~vivt~G~----~G~~~~~-~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g 210 (260)
|... .++...+++.|.+ .|+ +.|+||.|. .|+++++ ++..++++.+++. +|++|+||+|+|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 9753 3456667889998 899 999999984 6888875 6666777776664 899999999999999999999
Q ss_pred CcccccHHHHHHHHHHHHHHhhHHhhh
Q 024908 211 QNLIKDENRLREALLFANACGALTVTE 237 (260)
Q Consensus 211 ~~~~~~~~~~~~a~~~a~~~Aa~~~~~ 237 (260)
++ +++|+++|+++++..+++
T Consensus 229 ~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999999988875
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.85 E-value=1.4e-20 Score=156.02 Aligned_cols=165 Identities=13% Similarity=0.060 Sum_probs=123.5
Q ss_pred cCccEEEEccccCCCchhHHHHHHHHHHHHHCC------CeEEEcCCCCCC--CCCCHHHHHHHHHHHhhhCCEEecCHH
Q 024908 62 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG------SILSYDPNLRLP--LWPSEEAAREGIMSIWDQADIIKVSDD 133 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~------~~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~dvl~~n~~ 133 (260)
.++|.|..+. +......+.+.++++..++.+ .++++||..... +|. .+...+.+.++++++|+++||..
T Consensus 75 ~~~daV~tG~--l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGY--INNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 4788877764 455566778888888877654 789999955433 554 33445566679999999999999
Q ss_pred HHhhhcCCCCC--CchHHHHHHhcCCCCeEEEEecCCCc-------eEEEec------CceeeecCcccccccCCCCchH
Q 024908 134 EITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-------CRYYTK------EFKGRVPGVKTKAVDTTGAGDS 198 (260)
Q Consensus 134 E~~~l~g~~~~--~~~~~~~~~l~~~g~~~vivt~G~~G-------~~~~~~------~~~~~~~~~~~~~vdt~GaGDa 198 (260)
|++.|+|.... ++...+++.|++.|++.|+||.|..| +++..+ +..++++.++++. +++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 99999998643 34456788888899999999999887 333333 3566677766665 89999999
Q ss_pred HHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhc
Q 024908 199 FVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 238 (260)
Q Consensus 199 f~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~ 238 (260)
|+|+|+++| +|++ +++|+++|.++....+++-
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 9999999999977777653
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.73 E-value=7.8e-17 Score=131.67 Aligned_cols=163 Identities=17% Similarity=0.072 Sum_probs=115.5
Q ss_pred hhhcCccEEEE-ccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHH
Q 024908 59 NLIKQGSIFHY-GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEI 135 (260)
Q Consensus 59 ~~~~~~d~v~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~ 135 (260)
+.++.++.+++ .|. + .+...+.+..+++.+++.+.++++||..... +. .......++++ ++++++||..|+
T Consensus 54 ~~~~~a~~lvi~~G~-~-~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~~-~~~~~~~~ll~~~~~~vitPN~~E~ 127 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-L-SKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEI 127 (272)
T ss_dssp HHHHHSSEEEEECTT-C-CHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHH
T ss_pred HHHHhCCEEEEECCC-C-CHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---cc-chHHHHHHHHccCCCeEECCCHHHH
Confidence 45567888776 343 2 3455678888888899999999999964322 11 11233456676 899999999999
Q ss_pred hhhcCCC-C----------CCchHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHH
Q 024908 136 TFLTGGD-D----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGIL 204 (260)
Q Consensus 136 ~~l~g~~-~----------~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~ 204 (260)
..|+|.. . .++...+++.|.+++...|++| |..+ ++.+++..++++.....+.|++|+||+|+|.+.
T Consensus 128 ~~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~ia 205 (272)
T 1ekq_A 128 AHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVG 205 (272)
T ss_dssp HHHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHH
T ss_pred HHHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHH
Confidence 9999865 2 2234456677776544455666 8877 555666677777766677899999999988888
Q ss_pred HHHHhcCcccccHHHHHHHHHHHHH----HhhHHhh
Q 024908 205 NCLAADQNLIKDENRLREALLFANA----CGALTVT 236 (260)
Q Consensus 205 ~~l~~g~~~~~~~~~~~~a~~~a~~----~Aa~~~~ 236 (260)
+.+.+|.+ +.+|+++|.. ++.....
T Consensus 206 a~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 206 AFCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 88888999 9999999886 4444443
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.72 E-value=5.7e-17 Score=144.70 Aligned_cols=163 Identities=17% Similarity=0.100 Sum_probs=120.6
Q ss_pred CccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhh
Q 024908 63 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 138 (260)
Q Consensus 63 ~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l 138 (260)
+.|.|.+|.+ +....+.+.++++..++.+.++++||.... .++ +.+........+++.+|+++||..|++.|
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~-~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLA-GKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC----------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCC-CHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 7899998854 666677777788777666889999996532 222 12222223347899999999999999999
Q ss_pred cCCC----CCCchHHHHHHhcCCCC-eEEEEecCCCc--------e--EEE--ecCceeeecCcccccccCCCCchHHHH
Q 024908 139 TGGD----DHNDDNVVLEKLFHPNL-KLLIVTEGSKG--------C--RYY--TKEFKGRVPGVKTKAVDTTGAGDSFVS 201 (260)
Q Consensus 139 ~g~~----~~~~~~~~~~~l~~~g~-~~vivt~G~~G--------~--~~~--~~~~~~~~~~~~~~~vdt~GaGDaf~A 201 (260)
+|.. +.++...+++.|.+.|. +.|+||.|..+ + +++ .++..++++.+.++.+||+|+||+|+|
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fsa 246 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLAS 246 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHHH
Confidence 9963 23345567788888776 89999998753 3 455 345666777777778899999999999
Q ss_pred HHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhh
Q 024908 202 GILNCLAADQNLIKDENRLREALLFANACGALTVT 236 (260)
Q Consensus 202 g~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~ 236 (260)
+|+++|++|.+ +.+|+++|...-...++
T Consensus 247 aiaa~La~G~~-------l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 247 AIASNLARGYS-------LPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp HHHHHHHTTCC-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999975444443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.42 E-value=2e-12 Score=104.89 Aligned_cols=147 Identities=16% Similarity=0.095 Sum_probs=101.0
Q ss_pred hhhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhh
Q 024908 59 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITF 137 (260)
Q Consensus 59 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~ 137 (260)
+.++.+|.+.++.=.+ .+...+.+..+++.+++.+.++++||..... +. ...+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 4667889887752222 4334456677778888889999999964322 11 11223334444 39999999999999
Q ss_pred hcCCCC----------C-CchHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHH
Q 024908 138 LTGGDD----------H-NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 206 (260)
Q Consensus 138 l~g~~~----------~-~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~ 206 (260)
|+|... . ++...+++.|.+++...|++| |..+. +++++..+.++.......+++|+||+|+|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 987541 1 334456777877655567777 77664 4566666777665545569999999999999999
Q ss_pred HHhcCc
Q 024908 207 LAADQN 212 (260)
Q Consensus 207 l~~g~~ 212 (260)
+++|.+
T Consensus 205 lA~g~~ 210 (265)
T 1v8a_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCC
Confidence 999874
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.31 E-value=2e-11 Score=101.02 Aligned_cols=171 Identities=13% Similarity=0.083 Sum_probs=105.4
Q ss_pred hhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHH-h-hhCCEEecCHHHHhh
Q 024908 60 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-W-DQADIIKVSDDEITF 137 (260)
Q Consensus 60 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l-~~~dvl~~n~~E~~~ 137 (260)
.+++.|.+.++.=...++...+.+.++++.++ .+.++++|+. ...+...-.++ + +.+++++||..|++.
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44578888887311223334455565655444 4789999983 22222110011 3 467899999999999
Q ss_pred hcCCCCCC---ch-HHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHH-HHh-cC
Q 024908 138 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC-LAA-DQ 211 (260)
Q Consensus 138 l~g~~~~~---~~-~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~-l~~-g~ 211 (260)
|+|....+ +. ..+++.|.+ + .+|+..| .+.++++ +...++.....+..+++|+||+| +|++++ +++ |.
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g~ 266 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFHT 266 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCCS
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccCC
Confidence 99976432 23 446667766 4 3455555 5667776 44345555566778999999998 555555 578 99
Q ss_pred cccccHHHHHHHHHHHHHHhhHHhhh---cCCCCCCCCHHHHHHHHh
Q 024908 212 NLIKDENRLREALLFANACGALTVTE---RGAIPALPTKEAALKLLH 255 (260)
Q Consensus 212 ~~~~~~~~~~~a~~~a~~~Aa~~~~~---~g~~~~~~~~~~l~~~~~ 255 (260)
+ +.+|+.+|..+.+..... .| .+ ....+|.+.+.
T Consensus 267 ~-------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 267 D-------RFEVAAAAVFLHSYIADQLSKEA--YV-VLPTRISAEIT 303 (311)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHHHTTC--SS-CCHHHHHHHHH
T ss_pred C-------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 9 999999987666654332 24 23 46666665544
No 64
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.31 E-value=4.9e-11 Score=98.68 Aligned_cols=170 Identities=12% Similarity=-0.009 Sum_probs=103.8
Q ss_pred hhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHh--hhCCEEecCHHHHhh
Q 024908 60 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVSDDEITF 137 (260)
Q Consensus 60 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~E~~~ 137 (260)
.+++.|.+.++.=...++...+.+..+++.++ .+.++++|+. ...+...-.+++ +.+++++||..|+..
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 44578888887311223334455556555443 5789999983 222221100112 467899999999999
Q ss_pred hcCCCCCC---ch-HHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcc
Q 024908 138 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 213 (260)
Q Consensus 138 l~g~~~~~---~~-~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~ 213 (260)
|+|....+ +. ..+++.+ ++ +|+..| .+.++++ ++..++.+...+..+++|+||+|+|.+.+.+++|.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~- 250 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP- 250 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 99976332 22 4466666 43 455556 4666666 433344455567788999999975544445579999
Q ss_pred cccHHHHHHHHHHHHHHhhHHhh---hcCCCCCCCCHHHHHHHHh
Q 024908 214 IKDENRLREALLFANACGALTVT---ERGAIPALPTKEAALKLLH 255 (260)
Q Consensus 214 ~~~~~~~~~a~~~a~~~Aa~~~~---~~g~~~~~~~~~~l~~~~~ 255 (260)
+.+|+.+|..+.+.... ..| .+ ....+|.+.+.
T Consensus 251 ------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 286 (310)
T 2r3b_A 251 ------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALP 286 (310)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 89999988766655333 224 23 35666655443
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.25 E-value=6.1e-10 Score=90.11 Aligned_cols=158 Identities=15% Similarity=0.024 Sum_probs=107.7
Q ss_pred hhhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhh
Q 024908 59 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITF 137 (260)
Q Consensus 59 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~ 137 (260)
+..+.++.++++-=. ..+...+.+...++.+++.+.++++||..-.. +. ...+....++ ..+++++||..|+..
T Consensus 54 e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~-~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 54 QMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SD-IRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp HHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CH-HHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---cc-cCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 566788988776322 33334567777788889999999999964432 12 1122222322 368999999999999
Q ss_pred hcCCCCC-------------C---chHHHHHHhcCCCC-eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHH
Q 024908 138 LTGGDDH-------------N---DDNVVLEKLFHPNL-KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFV 200 (260)
Q Consensus 138 l~g~~~~-------------~---~~~~~~~~l~~~g~-~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ 200 (260)
|.|.... + +...+++.+.+++. ..|++|-+ .-++.+++..+.++.-......++|+||+++
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~--~D~i~dg~~~~~~~~G~~~~~~v~GtGc~Ls 206 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGI--QDVLVSQEQVIVLQNGVPELDCFTGTGDLVG 206 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESS--SEEEECSSCEEEECCCCGGGGSSTTHHHHHH
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECC--eeEEEcCCEEEEeCCCCcccCCcCCchHHHH
Confidence 9986521 1 22346677776555 77888843 2355566666666554444556799999999
Q ss_pred HHHHHHHHhcCcccccHHHHHHHHHHHHHH
Q 024908 201 SGILNCLAADQNLIKDENRLREALLFANAC 230 (260)
Q Consensus 201 Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 230 (260)
|.+.+.+++|.+ +.+|+..|...
T Consensus 207 ~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 207 ALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 999999999998 88888776554
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.09 E-value=2.3e-09 Score=87.21 Aligned_cols=172 Identities=14% Similarity=0.085 Sum_probs=107.7
Q ss_pred hhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhc
Q 024908 60 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 139 (260)
Q Consensus 60 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~ 139 (260)
.+++.|++.++.=.-.+ +...++++.+.+.+.++++|...-..- .+ ......++++||..|+..|+
T Consensus 95 ~l~~~davviGPGlg~~----~~~~~~~~~~l~~~~p~VlDAdal~~~---------~l-~~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAKR---------TY-PKREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTTCCCC----HHHHHHHHHHTTSSSCEEECGGGCCSC---------CC-CCCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCCCCCC----HHHHHHHHHHHhhCCCEEEECCccchh---------hh-hhccCCEEEecCHHHHHHHh
Confidence 45788999887311122 234456666666788999997432210 00 00235689999999999999
Q ss_pred CCCCC---CchHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCccccc
Q 024908 140 GGDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKD 216 (260)
Q Consensus 140 g~~~~---~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~ 216 (260)
|.... ++...+++.+.+++...|+ -.|. +.++++++..+++.....+...++|+||++++.+.+.+++|.+
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~~Vv-lKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~---- 234 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQTVIV-LKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 234 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTSEEE-ECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CCCccchHHHHHHHHHHHHHHcCeEEE-EeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC----
Confidence 97632 3444456677654323444 4454 4566666645555554556778999999886666666789999
Q ss_pred HHHHHHHHHHHHH----HhhHHhhhcCCCCCCCCHHHHHHHHhh
Q 024908 217 ENRLREALLFANA----CGALTVTERGAIPALPTKEAALKLLHT 256 (260)
Q Consensus 217 ~~~~~~a~~~a~~----~Aa~~~~~~g~~~~~~~~~~l~~~~~~ 256 (260)
+.+|+..|.. ++-...++.|.. + ....+|.+.+..
T Consensus 235 ---~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp~ 273 (279)
T 3rpz_A 235 ---PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILPR 273 (279)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHH
Confidence 9999988864 344444455544 3 366666665543
No 67
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.01 E-value=3.5e-09 Score=92.96 Aligned_cols=173 Identities=14% Similarity=0.040 Sum_probs=106.4
Q ss_pred hhhcCccEEEEccccCCCchhHHHHHHHHH-HHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 024908 59 NLIKQGSIFHYGSISLIAEPCRSTQLAAMN-LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 137 (260)
Q Consensus 59 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~ 137 (260)
+.++++|.+.++.=...++ ....+++ .+++.+.++++|+..-..+ . .+.+ +..+..++++||..|+..
T Consensus 316 ~~~~~~davviGpGlg~~~----~~~~~~~~~l~~~~~pvVlDadgl~~l--~----~~ll-~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNE----HVREFVNEFLKTLEKPAVIDADAINVL--D----TSVL-KERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTTCCCSH----HHHHHHHHHHHHCCSCEEECHHHHHTC--C----HHHH-HHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCH----HHHHHHHHHHHhcCCCEEEeCcccchh--c----HHHH-hccCCCEEEeCCHHHHHH
Confidence 4567899998873222222 2222333 3556689999997411110 0 1111 112357899999999999
Q ss_pred hcCCCC---CCchHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCccc
Q 024908 138 LTGGDD---HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLI 214 (260)
Q Consensus 138 l~g~~~---~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~ 214 (260)
|+|... .++ ..+++.+.+++. .+|+..|. +.++++++..+ +.....+..+++|+||+|++.+.+.+++|.+
T Consensus 385 L~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~-- 458 (502)
T 3rss_A 385 LVKKTVGDVKYN-YELAEEFAKEND-CVLVLKSA-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS-- 458 (502)
T ss_dssp HHTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSS-SEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC--
T ss_pred HhCCCccchHHH-HHHHHHHHHHcC-CEEEEeCC-CeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC--
Confidence 999752 123 446666665432 24555565 45566666443 3334456678999999998888888889999
Q ss_pred ccHHHHHHHHHHHHHHhhHHhhhc--CCCCCCCCHHHHHHHHh
Q 024908 215 KDENRLREALLFANACGALTVTER--GAIPALPTKEAALKLLH 255 (260)
Q Consensus 215 ~~~~~~~~a~~~a~~~Aa~~~~~~--g~~~~~~~~~~l~~~~~ 255 (260)
+.+|+.+|+..-+..-..- |.. + ....+|.+.+.
T Consensus 459 -----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp 494 (502)
T 3rss_A 459 -----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIP 494 (502)
T ss_dssp -----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9999998876655543221 322 2 46666666554
No 68
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.78 E-value=2.8e-07 Score=81.58 Aligned_cols=154 Identities=17% Similarity=0.006 Sum_probs=99.8
Q ss_pred hhhcC-ccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHH
Q 024908 59 NLIKQ-GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEI 135 (260)
Q Consensus 59 ~~~~~-~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~ 135 (260)
+..+. ++.++++-=.+ .+ .+.+....+.+++.+.++++||..-.. + ....+...++++ .+++++||..|+
T Consensus 301 e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~-~~r~~~~~~Ll~~~~~~vItpN~~E~ 373 (540)
T 3nl6_A 301 DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---T-ETRLLLNNKLLTFGQFSCIKGNSSEI 373 (540)
T ss_dssp HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---S-HHHHHHHHHHTTSCCCSEEEECHHHH
T ss_pred HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---c-cccHHHHHHHHhhCCCeEECCCHHHH
Confidence 45566 78887653223 22 678888888899999999999965433 1 222344556776 799999999999
Q ss_pred hhhcCCCC-------------CCchHHHHHHhcCCCCeEEEEecCCCceEEEec-------------------Cceeeec
Q 024908 136 TFLTGGDD-------------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK-------------------EFKGRVP 183 (260)
Q Consensus 136 ~~l~g~~~-------------~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~-------------------~~~~~~~ 183 (260)
..|.|... .++...+++.+.++....|++| |.. -++.++ +..+.++
T Consensus 374 ~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (540)
T 3nl6_A 374 LGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVE 451 (540)
T ss_dssp HHHTTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEE
T ss_pred HHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEEEEC
Confidence 99998642 1233446677776555566666 443 344444 3344444
Q ss_pred Ccc-cccccCCCCchHHHHHHHHHHHhcC---cccccHHHHHHHHHHHH
Q 024908 184 GVK-TKAVDTTGAGDSFVSGILNCLAADQ---NLIKDENRLREALLFAN 228 (260)
Q Consensus 184 ~~~-~~~vdt~GaGDaf~Ag~~~~l~~g~---~~~~~~~~~~~a~~~a~ 228 (260)
.-. .-.-.++|.||++.+.+.+.++.+. + +.+|+..|.
T Consensus 452 ~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~ 493 (540)
T 3nl6_A 452 AGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGV 493 (540)
T ss_dssp CSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHH
T ss_pred CCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHH
Confidence 322 1223469999999999988888886 5 556655543
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.68 E-value=7.3e-07 Score=71.58 Aligned_cols=147 Identities=16% Similarity=0.071 Sum_probs=90.2
Q ss_pred hhhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHH-hhhCCEEecCHHHHhh
Q 024908 59 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-WDQADIIKVSDDEITF 137 (260)
Q Consensus 59 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l~~~dvl~~n~~E~~~ 137 (260)
+..+.++.++++-=. ..+...+.+....+.+++.+.|+++||..-.. +.- ......++ -.+++++++|..|...
T Consensus 52 e~~~~a~al~iNiGt-l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~-R~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKF-RTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHH-HHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECCC-CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHH-HHHHHHHHHhcCCcEEcCCHHHHHH
Confidence 344566766654222 33444566777788899999999999964332 121 12222333 2468999999999999
Q ss_pred hcCCC-----------CCCchHHHHHHhcCCCCeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHH
Q 024908 138 LTGGD-----------DHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 206 (260)
Q Consensus 138 l~g~~-----------~~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~ 206 (260)
|.|.. ..++...+++.+.++.-..|++| |+ .-++.+++..+.++.-..-.-..+|.||.+.+.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~-~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GA-VDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SS-SEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CC-CeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 98642 11233446666666544466666 54 4556666666655443323334589999987776666
Q ss_pred HHhcCc
Q 024908 207 LAADQN 212 (260)
Q Consensus 207 l~~g~~ 212 (260)
++.+.+
T Consensus 205 lA~~~~ 210 (265)
T 3hpd_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCh
Confidence 677643
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=98.08 E-value=3e-05 Score=67.55 Aligned_cols=168 Identities=14% Similarity=0.060 Sum_probs=97.3
Q ss_pred hcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcC
Q 024908 61 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 140 (260)
Q Consensus 61 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g 140 (260)
.++.|.+.++.=.-.++. + +..+++ . + ++++|-..-.. . .+.+.++...+++||..|+..|+|
T Consensus 290 ~~~~~a~~iGPGlG~~~~--~-l~~~l~---~-~-p~VlDADaL~~--------~-~~~~~~~~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPK--D-FNRWLE---L-A-PCVLDAGVFYH--------K-EILQALEKEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp CSSCSEEEECTTCSSCCT--T-HHHHHH---H-S-CEEEEGGGGGS--------G-GGGTTTTSSEEEECCHHHHHHHHH
T ss_pred ccCCCEEEEcCCCCCCHH--H-HHHHHh---c-C-CEEEECcccCC--------c-hhhhccCCCEEECCCHHHHHHHhC
Confidence 367888888732122221 2 444442 3 4 89999631100 0 111233456899999999999987
Q ss_pred C-----CCC---CchHHHHHHhcCCC-CeEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcC
Q 024908 141 G-----DDH---NDDNVVLEKLFHPN-LKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQ 211 (260)
Q Consensus 141 ~-----~~~---~~~~~~~~~l~~~g-~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~ 211 (260)
. +.. ++...+++.+.++. ...|+++ |.. .++.+++..+..+ ...+-..+.|.||++++.+.+.+++|.
T Consensus 353 ~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlK-G~~-~vI~~~~~~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~ 429 (475)
T 3k5w_A 353 LVGINISMLELLDNKLEIARDFSQKYPKVVLLLK-GAN-TLIAHQGQVFINI-LGSVALAKAGSGDVLAGLILSLLSQNY 429 (475)
T ss_dssp HTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEEC-SSS-EEEEETTEEEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEe-CCC-CEEECCCEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 5 322 12233556666544 5566666 443 3444444443332 233445689999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHhhHHhhhc-CCCCCCCCHHHHHHHHhhc
Q 024908 212 NLIKDENRLREALLFANACGALTVTER-GAIPALPTKEAALKLLHTV 257 (260)
Q Consensus 212 ~~~~~~~~~~~a~~~a~~~Aa~~~~~~-g~~~~~~~~~~l~~~~~~~ 257 (260)
+ +.+|+..|...-+..-... +.. + ....+|.+.+.+.
T Consensus 430 ~-------~~~Aa~~a~~lhg~ag~~a~~~~-~-~~a~dl~~~l~~~ 467 (475)
T 3k5w_A 430 T-------PLDAAINASLAHALASLEFKNNY-A-LTPLDLIEKIKQL 467 (475)
T ss_dssp C-------HHHHHHHHHHHHHHGGGGCSSTT-C-CCHHHHHHHHHTC
T ss_pred C-------HHHHHHHHHHHHHHHHHHhccCC-C-cCHHHHHHHhhhh
Confidence 8 8888777654433332221 221 3 4778887777654
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.06 E-value=0.0002 Score=61.79 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=57.1
Q ss_pred cCccEEEEccccCCCc---------hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCH
Q 024908 62 KQGSIFHYGSISLIAE---------PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSD 132 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~ 132 (260)
++.|.++++|+..+.+ ...+...+.++..+..+.++-++..... +.+.....+..+++++|.+-.|+
T Consensus 235 ~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~----~~~l~~~i~~~i~p~vDSlGmNE 310 (474)
T 3drw_A 235 KEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQ----DRKLRKKIITNILPFVDSVGIDE 310 (474)
T ss_dssp HHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCS----CHHHHHHHHHHTGGGSSEEEEEH
T ss_pred cCCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccc----cHHHHHHHHHHhcccccccccCH
Confidence 3699999999988776 2223334555556678999999986432 35666777788999999999999
Q ss_pred HHHhhhcCC
Q 024908 133 DEITFLTGG 141 (260)
Q Consensus 133 ~E~~~l~g~ 141 (260)
.|+..+.+.
T Consensus 311 qELa~l~~~ 319 (474)
T 3drw_A 311 AEIAQILSV 319 (474)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887653
No 72
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=97.61 E-value=0.0017 Score=56.09 Aligned_cols=74 Identities=7% Similarity=0.062 Sum_probs=52.1
Q ss_pred cCccEEEEccccCCCchh----HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 024908 62 KQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 137 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~~~----~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~ 137 (260)
.++|.+.++|+..+.+.+ .+.....++.....+.++-+++.... +.+.....+ .+++++|.+-+|+.|+..
T Consensus 224 ~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~~iH~ElAs~~----~~~~~~~i~-~ilp~vDSlGmNE~EL~~ 298 (455)
T 1ua4_A 224 KNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTP----DEKVREEIL-NVLGMFYSVGLNEVELAS 298 (455)
T ss_dssp GGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCC----CHHHHHHHH-HHGGGCSEEEECHHHHHH
T ss_pred cCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCceEEEEeCCcc----CHHHHHHHH-hhhccCcccccCHHHHHH
Confidence 459999999998877643 22222222233567789999987543 245556666 899999999999999987
Q ss_pred hcC
Q 024908 138 LTG 140 (260)
Q Consensus 138 l~g 140 (260)
+.+
T Consensus 299 l~~ 301 (455)
T 1ua4_A 299 IME 301 (455)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.15 E-value=0.014 Score=50.39 Aligned_cols=72 Identities=7% Similarity=0.065 Sum_probs=51.9
Q ss_pred cCccEEEEccccCCCchh----HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 024908 62 KQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 137 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~~~----~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~ 137 (260)
.+.|.+++||+..+.+.. .+...+.++.....++++-++..... +.+.....+ .+++++|-+-+|+.|+..
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~----~~~l~~~i~-~ilp~vDSlGmNEqELa~ 301 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTP----DEVVRLEIV-KLLKHFYSVGLNEVELAS 301 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCS----SHHHHHHHH-HHGGGCSEEEECHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcc----cHHHHHHHH-hhccccccCccCHHHHHH
Confidence 569999999998877611 11122333344678899999886433 355567777 999999999999999987
Q ss_pred h
Q 024908 138 L 138 (260)
Q Consensus 138 l 138 (260)
+
T Consensus 302 l 302 (457)
T 1l2l_A 302 V 302 (457)
T ss_dssp H
T ss_pred H
Confidence 4
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=96.51 E-value=0.11 Score=44.86 Aligned_cols=71 Identities=4% Similarity=0.087 Sum_probs=50.4
Q ss_pred cCccEEEEccccCCCc-----h-hHHHHHH---HHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCH
Q 024908 62 KQGSIFHYGSISLIAE-----P-CRSTQLA---AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSD 132 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~-----~-~~~~~~~---~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~ 132 (260)
.+.|.+++||+.++.+ . -.+-+.. .++.....++++-++..... +.+.....+ .+++++|-+-+|+
T Consensus 232 ~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As~~----~~~l~~~i~-~ilp~vDSlGmNE 306 (467)
T 1gc5_A 232 RNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTA----NRRVREALV-ELLPKFTSVGLNE 306 (467)
T ss_dssp TTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCC----CHHHHHHHH-HHGGGCSEEEECH
T ss_pred cCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEECCcc----cHHHHHHHH-hhccccccCccCH
Confidence 4699999999988765 2 1222222 23333557889999886433 355667777 9999999999999
Q ss_pred HHHhh
Q 024908 133 DEITF 137 (260)
Q Consensus 133 ~E~~~ 137 (260)
.|+..
T Consensus 307 qELa~ 311 (467)
T 1gc5_A 307 VELAS 311 (467)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
No 75
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=47.47 E-value=67 Score=26.89 Aligned_cols=96 Identities=11% Similarity=0.011 Sum_probs=59.2
Q ss_pred cCccEEEEccccC------CCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHH
Q 024908 62 KQGSIFHYGSISL------IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEI 135 (260)
Q Consensus 62 ~~~d~v~~~~~~~------~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~ 135 (260)
..++++.++.+-. ....+.+....+.+.+++.|++++.++..... +..+.+.+|++++...+.
T Consensus 168 aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~-----------~~~l~~~vd~lkIgs~~~ 236 (385)
T 3nvt_A 168 KGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPAD-----------IEVALDYVDVIQIGARNM 236 (385)
T ss_dssp TTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGG-----------HHHHTTTCSEEEECGGGT
T ss_pred cCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHH-----------HHHHHhhCCEEEECcccc
Confidence 4678887776432 12345677788888889999999999863211 222344699999876654
Q ss_pred hh------hc--C--------C-CCCCchHHHHHHhcCCCCeEEEEe-cCC
Q 024908 136 TF------LT--G--------G-DDHNDDNVVLEKLFHPNLKLLIVT-EGS 168 (260)
Q Consensus 136 ~~------l~--g--------~-~~~~~~~~~~~~l~~~g~~~vivt-~G~ 168 (260)
.. +. | . .+.++...+++.+...|.+.+++. +|.
T Consensus 237 ~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~ 287 (385)
T 3nvt_A 237 QNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGI 287 (385)
T ss_dssp TCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB
T ss_pred cCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 32 21 1 2 244555667788887777554444 443
No 76
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.75 E-value=38 Score=28.39 Aligned_cols=78 Identities=12% Similarity=0.105 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhh-CCEEecCHHHHhh------hc----------C
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ-ADIIKVSDDEITF------LT----------G 140 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~n~~E~~~------l~----------g 140 (260)
.+.+....+.+.|++.|+.++-.|. +. ..+..+.++ +|++++-..|+.. +. |
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpf-------D~----~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStG 166 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVC-------DE----GSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTA 166 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCC-------SH----HHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccC-------CH----HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECC
Confidence 4567788889999999999988874 22 222223344 7999976666432 21 3
Q ss_pred CCCCCchHHHHHHhcCCCCeEEEEec
Q 024908 141 GDDHNDDNVVLEKLFHPNLKLLIVTE 166 (260)
Q Consensus 141 ~~~~~~~~~~~~~l~~~g~~~vivt~ 166 (260)
..+.++...+++.+.+.|.+.|++-.
T Consensus 167 maTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 167 GAEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp TCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 33556666677888888876555544
No 77
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=41.20 E-value=65 Score=26.59 Aligned_cols=76 Identities=21% Similarity=0.215 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhh-CCEEecCHHHHh------hhc----------C
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ-ADIIKVSDDEIT------FLT----------G 140 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~n~~E~~------~l~----------g 140 (260)
.+.+....+.+.|++.|+.++-.|. +. ..+..+.++ +|++++-..|+. .+. |
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~f-------D~----~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstG 143 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPF-------DE----ESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTA 143 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC-------SH----HHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccC-------CH----HHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECC
Confidence 5677888899999999999888774 22 122223345 889886554432 221 3
Q ss_pred CCCCCchHHHHHHhcCCCCeEEEE
Q 024908 141 GDDHNDDNVVLEKLFHPNLKLLIV 164 (260)
Q Consensus 141 ~~~~~~~~~~~~~l~~~g~~~viv 164 (260)
..+.++...+++.+.+.|.+.+++
T Consensus 144 mstl~Ei~~Ave~i~~~g~~viLl 167 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKDLTIM 167 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 334556666777777777765553
No 78
>2yxh_A MAZG-related protein; TM0360, LEFT-handed superhelix fold, structural genomics; 2.00A {Thermotoga maritima}
Probab=38.86 E-value=88 Score=21.06 Aligned_cols=56 Identities=16% Similarity=0.023 Sum_probs=38.1
Q ss_pred CchHHHHHHHHHHHh----cCcccccHHHHHHHHHHHHHHhhHHhhh-cCCCCCCCCHHHHHHHHhhccC
Q 024908 195 AGDSFVSGILNCLAA----DQNLIKDENRLREALLFANACGALTVTE-RGAIPALPTKEAALKLLHTVAA 259 (260)
Q Consensus 195 aGDaf~Ag~~~~l~~----g~~~~~~~~~~~~a~~~a~~~Aa~~~~~-~g~~~~~~~~~~l~~~~~~~~~ 259 (260)
.||.+...+.++... |.+ +++++..++.-=..--.+ .+.. .+ +.+++.+..+++++
T Consensus 54 lGDlLf~vv~la~~~~~~~~~d-------~e~al~~~~~K~~rR~~~v~~~~-~~-~~~e~~~~W~~~K~ 114 (116)
T 2yxh_A 54 IGDMIYDALLVAAVAQRDYGID-------LESAIQKVVEKISHRKPWLFWEE-KI-SLEEAEKIWKERKK 114 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHCGGGGCSS-CC-CHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhHcCCCC-------HHHHHHHHHHHHHHHhHHHhCCC-CC-CHHHHHHHHHHHHh
Confidence 499999988888765 888 999998765533222222 2222 33 88999888887763
No 79
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=36.16 E-value=68 Score=26.47 Aligned_cols=76 Identities=9% Similarity=0.093 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhh-CCEEecCHHHHhh------hc----------C
Q 024908 78 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ-ADIIKVSDDEITF------LT----------G 140 (260)
Q Consensus 78 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~n~~E~~~------l~----------g 140 (260)
.+.+....+.+.|++.|+.++-.|. +. ..+..+.++ +|++++-..|+.. +. |
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~-------d~----~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstG 156 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLF-------SR----AAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTG 156 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC-------SH----HHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeC-------CH----HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECC
Confidence 5678888999999999999888774 22 222223345 8999976665432 21 2
Q ss_pred CCCCCchHHHHHHhcCCCCeEEEE
Q 024908 141 GDDHNDDNVVLEKLFHPNLKLLIV 164 (260)
Q Consensus 141 ~~~~~~~~~~~~~l~~~g~~~viv 164 (260)
..+.++...+++.+.+.|.+.+++
T Consensus 157 mat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 157 MNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 334556666777777777644444
No 80
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=36.10 E-value=1e+02 Score=24.15 Aligned_cols=93 Identities=10% Similarity=-0.024 Sum_probs=56.9
Q ss_pred cCccEEEEccccCCC------chhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHH
Q 024908 62 KQGSIFHYGSISLIA------EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEI 135 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~------~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~ 135 (260)
..+++|.+..+-... ....+....+.+.+++.|.+++.++... .. .+.+.+ .+|++++...+.
T Consensus 49 ~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~-------~~-~~~l~~---~vd~~kIga~~~ 117 (262)
T 1zco_A 49 VGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDT-------RH-VELVAK---YSDILQIGARNS 117 (262)
T ss_dssp TTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCG-------GG-HHHHHH---HCSEEEECGGGT
T ss_pred cCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCH-------Hh-HHHHHh---hCCEEEECcccc
Confidence 356777666543211 1126777778888899999999998532 11 333333 589999876654
Q ss_pred hh------hc--C--------CC-CCCchHHHHHHhcCCCCeEEEEe
Q 024908 136 TF------LT--G--------GD-DHNDDNVVLEKLFHPNLKLLIVT 165 (260)
Q Consensus 136 ~~------l~--g--------~~-~~~~~~~~~~~l~~~g~~~vivt 165 (260)
+. +. | .. +.++...+++.+...|.+.+++.
T Consensus 118 ~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~ 164 (262)
T 1zco_A 118 QNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILC 164 (262)
T ss_dssp TCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 43 21 2 22 44556667788888887655544
No 81
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=33.63 E-value=1.3e+02 Score=21.48 Aligned_cols=72 Identities=6% Similarity=0.064 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEec-----CHHHHhhhcCCCCCCchHHHHHHhc
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV-----SDDEITFLTGGDDHNDDNVVLEKLF 155 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~E~~~l~g~~~~~~~~~~~~~l~ 155 (260)
+.+.++++.+++.|..+.+..+.... .+.+..+++..|.+.+ +.+.-..+.|.. .+...+..+.+.
T Consensus 19 ~~~~~l~~~~~~~g~~~~l~TNG~l~--------~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~-~~~i~~~i~~l~ 89 (182)
T 3can_A 19 EFLIDILKRCGQQGIHRAVDTTLLAR--------KETVDEVMRNCELLLIDLKSMDSTVHQTFCDVP-NELILKNIRRVA 89 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTCCC--------HHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCCCCC--------HHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCC-HHHHHHHHHHHH
Confidence 34467888888889888888765421 2334455566776553 344444556644 244444556666
Q ss_pred CCCCeE
Q 024908 156 HPNLKL 161 (260)
Q Consensus 156 ~~g~~~ 161 (260)
+.|.+.
T Consensus 90 ~~g~~v 95 (182)
T 3can_A 90 EADFPY 95 (182)
T ss_dssp HTTCCE
T ss_pred hCCCeE
Confidence 666554
No 82
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=33.54 E-value=29 Score=23.74 Aligned_cols=63 Identities=11% Similarity=0.053 Sum_probs=45.0
Q ss_pred cCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHH
Q 024908 62 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEI 135 (260)
Q Consensus 62 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~ 135 (260)
..++++..+|. . +.+.+..+.+..+..++.++.||.. .+++.+..+.+.++.+...++...++
T Consensus 25 ~~~~iI~t~Gs--i---~~~~l~~I~~~~~~r~VIi~TD~D~------~GekIRk~i~~~lp~~~hafi~r~~~ 87 (119)
T 2fcj_A 25 EPVVIVCTNGT--I---SDARLEELADELEGYDVYLLADADE------AGEKLRRQFRRMFPEAEHLYIDRAYR 87 (119)
T ss_dssp SCCEEEECCSC--C---CHHHHHHHHHHTTTSEEEEECCSSH------HHHHHHHHHHHHCTTSEEECCCTTTC
T ss_pred CCCCEEEeCCc--c---CHHHHHHHHHHhcCCCEEEEECCCc------cHHHHHHHHHHHCCCCcEEeccCCcc
Confidence 36788888775 2 3345555555566677777779852 36788888999999999888888764
No 83
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=32.41 E-value=98 Score=24.51 Aligned_cols=76 Identities=11% Similarity=0.032 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh------h--cC--------CC-
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF------L--TG--------GD- 142 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~------l--~g--------~~- 142 (260)
.+-...+.+.+++.|.+++.++..... .+.+.+ .+|++++-..+.+. + +| ..
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~--------~~~l~~---~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~ 156 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRH--------VETVSR---YADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGN 156 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGG--------HHHHHH---HCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHH--------HHHHHH---hCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCC
Confidence 567777778889999999988853211 333333 58999876555432 1 12 22
Q ss_pred CCCchHHHHHHhcCCCCeEEEEec
Q 024908 143 DHNDDNVVLEKLFHPNLKLLIVTE 166 (260)
Q Consensus 143 ~~~~~~~~~~~l~~~g~~~vivt~ 166 (260)
+.++...+++.+...|.+.+++..
T Consensus 157 t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEe
Confidence 345556677777777776665554
No 84
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=30.35 E-value=2.1e+02 Score=22.93 Aligned_cols=77 Identities=19% Similarity=0.131 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHh------hhc----------CC-CC
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEIT------FLT----------GG-DD 143 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~------~l~----------g~-~~ 143 (260)
+-+..+.+.+++.|.+++-++. +. .....+.+.+|++++-..+++ ++. |. .+
T Consensus 99 ~GL~~L~~~~~e~GLpv~Tev~-------D~----~~v~~l~~~vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t 167 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTDIH-------TE----EQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLA 167 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEECC-------SH----HHHHHHTTTCSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCC
T ss_pred HHHHHHHHHHHhcCCeEEEEeC-------CH----HHHHHHHhhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCC
Confidence 4566666777899999998875 22 222333456999997654432 221 22 25
Q ss_pred CCchHHHHHHhcCCCCeEEEEe-cCC
Q 024908 144 HNDDNVVLEKLFHPNLKLLIVT-EGS 168 (260)
Q Consensus 144 ~~~~~~~~~~l~~~g~~~vivt-~G~ 168 (260)
.++...+++.+.+.|.+.|++. +|.
T Consensus 168 ~~ei~~ave~i~~~Gn~~iiL~erg~ 193 (298)
T 3fs2_A 168 PWDMKNVLAKITESGNPNVLATERGV 193 (298)
T ss_dssp GGGHHHHHHHHHTTTCCCEEEEECCE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 5677778888888887765554 444
No 85
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=29.21 E-value=2.1e+02 Score=22.54 Aligned_cols=95 Identities=9% Similarity=0.058 Sum_probs=49.8
Q ss_pred ccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh-hCCEEec-----CHHHHhh
Q 024908 64 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKV-----SDDEITF 137 (260)
Q Consensus 64 ~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~-----n~~E~~~ 137 (260)
+|+|=+.- ..+.+...++++.+++.+.+++..-....... +.+.+...+..... .+|++|+ +.++...
T Consensus 134 ~dyIDvEl-----~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP-~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~ 207 (276)
T 3o1n_A 134 VDMIDLEL-----FTGDDEVKATVGYAHQHNVAVIMSNHDFHKTP-AAEEIVQRLRKMQELGADIPKIAVMPQTKADVLT 207 (276)
T ss_dssp CSEEEEEG-----GGCHHHHHHHHHHHHHTTCEEEEEEEESSCCC-CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHH
T ss_pred CCEEEEEC-----cCCHHHHHHHHHHHHhCCCEEEEEeecCCCCc-CHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHH
Confidence 56664442 12345677777777888888776322111111 24455555555544 3688886 2222222
Q ss_pred hcCCCCCCchHHHHHHhcC--CCCeEEEEecCCCceEE
Q 024908 138 LTGGDDHNDDNVVLEKLFH--PNLKLLIVTEGSKGCRY 173 (260)
Q Consensus 138 l~g~~~~~~~~~~~~~l~~--~g~~~vivt~G~~G~~~ 173 (260)
+. .+...+.. ...+.+.+.+|..|.+.
T Consensus 208 Ll---------~~~~~~~~~~~~~PlIa~~MG~~G~~S 236 (276)
T 3o1n_A 208 LL---------TATVEMQERYADRPIITMSMSKTGVIS 236 (276)
T ss_dssp HH---------HHHHHHHHHTCCSCCEEEECSGGGTHH
T ss_pred HH---------HHHHHHHhcCCCCCEEEEECCCchhhH
Confidence 21 11112211 45677888899988543
No 86
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=26.13 E-value=1e+02 Score=24.35 Aligned_cols=57 Identities=19% Similarity=0.053 Sum_probs=36.6
Q ss_pred CchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHH-------hhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908 195 AGDSFVSGILNCLAADQNLIKDENRLREALLFANAC-------GALTVTERGAIPALPTKEAALKLLHTVA 258 (260)
Q Consensus 195 aGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~-------Aa~~~~~~g~~~~~~~~~~l~~~~~~~~ 258 (260)
-||.+.+.+..+...|.+ ++.|++.++.- .=..+...|-...-.+.++++.+.++.+
T Consensus 196 lGDlLFalVnlAR~~gID-------pE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~d~lW~~aK 259 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTK-------AEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVK 259 (265)
T ss_dssp HHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHH
Confidence 499999999999999999 99999876641 1122334455444557777777666554
No 87
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=25.65 E-value=1.7e+02 Score=23.23 Aligned_cols=78 Identities=12% Similarity=0.000 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHh------hhc----------CC-C
Q 024908 80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEIT------FLT----------GG-D 142 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~------~l~----------g~-~ 142 (260)
.+-+..+.+.+++.|.+++-++.... . .+. +.+++|++++-..+++ ++. |. .
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~-------~-v~~---l~~~vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~ 145 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAE-------Q-AAP---VAEIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFM 145 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGG-------G-HHH---HHTTCSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTS
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHH-------H-HHH---HHHhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCC
Confidence 35666677777899999998875221 1 223 3346899997664432 221 22 2
Q ss_pred CCCchHHHHHHhcCCCCeEEEEe-cCC
Q 024908 143 DHNDDNVVLEKLFHPNLKLLIVT-EGS 168 (260)
Q Consensus 143 ~~~~~~~~~~~l~~~g~~~vivt-~G~ 168 (260)
+.++...+++.+.+.|.+.|++. +|.
T Consensus 146 t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 146 SPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp CGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 55677778888888887765554 444
No 88
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=25.12 E-value=1.2e+02 Score=23.26 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhc
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 139 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~ 139 (260)
+.....++..++.|+.+++|=-.... .....+.. + .+|++|++..-...+.
T Consensus 139 ~~~~~~l~~l~~~G~~ialDdfG~g~------ssl~~L~~-l-~~d~iKiD~~~v~~~~ 189 (259)
T 3s83_A 139 ERAAVILKTLRDAGAGLALDDFGTGF------SSLSYLTR-L-PFDTLKIDRYFVRTMG 189 (259)
T ss_dssp HHHHHHHHHHHHHTCEEEEECC---C------HHHHHHHH-S-CCCEEEECHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCc------hhHHHHHh-C-CCCEEEECHHHHhhhh
Confidence 44556677889999999998432111 11112221 1 4799999987776653
No 89
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.17 E-value=2.8e+02 Score=22.32 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=27.6
Q ss_pred hhhhcCccEEEEcccc-CCCchhHHHHHHHHHHHHHCCCeEEEcCC
Q 024908 58 KNLIKQGSIFHYGSIS-LIAEPCRSTQLAAMNLAKESGSILSYDPN 102 (260)
Q Consensus 58 ~~~~~~~d~v~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~v~~d~~ 102 (260)
+..++..|-|.+-+.+ .......+.+...++..++.|..|.+.+.
T Consensus 6 P~~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~ 51 (327)
T 4h1h_A 6 PAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEH 51 (327)
T ss_dssp CCCCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTT
T ss_pred CCCCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcc
Confidence 4566778876432211 11222345566677888899999998764
No 90
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=23.45 E-value=1.5e+02 Score=22.91 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=33.9
Q ss_pred cccccchhhhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCC
Q 024908 52 CESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNL 103 (260)
Q Consensus 52 ~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~ 103 (260)
+.+.+....-...|.|.+++-. ....+.+.+++++.++.+.++++.|..
T Consensus 25 ~~~~l~~~~~~GtDaI~vGgs~---gvt~~~~~~~v~~ik~~~~Piil~p~~ 73 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGGTD---DVTEDNVIHLMSKIRRYPLPLVLEISN 73 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECCSS---CCCHHHHHHHHHHHTTSCSCEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEECCcC---CcCHHHHHHHHHHhcCcCCCEEEecCC
Confidence 3344433344568999998832 234567778888888888999998874
No 91
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=23.17 E-value=86 Score=24.60 Aligned_cols=63 Identities=11% Similarity=-0.026 Sum_probs=41.8
Q ss_pred hhcCccEEEE-ccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 024908 60 LIKQGSIFHY-GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 137 (260)
Q Consensus 60 ~~~~~d~v~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~ 137 (260)
..-.+|.|.+ ... .+.+.+.++.+.|++.|.-+.++.. +.+.+...+. -.++++=+|...+..
T Consensus 123 r~~GADaILLI~a~-----L~~~~l~~l~~~A~~lGl~~LvEVh-------~~~El~rAl~---~~a~iIGINNRnL~t 186 (258)
T 4a29_A 123 YNLGADTVLLIVKI-----LTERELESLLEYARSYGMEPLILIN-------DENDLDIALR---IGARFIGIMSRDFET 186 (258)
T ss_dssp HHHTCSEEEEEGGG-----SCHHHHHHHHHHHHHTTCCCEEEES-------SHHHHHHHHH---TTCSEEEECSBCTTT
T ss_pred HHcCCCeeehHHhh-----cCHHHHHHHHHHHHHHhHHHHHhcc-------hHHHHHHHhc---CCCcEEEEeCCCccc
Confidence 3446787742 221 2345788899999999999999986 4444444443 278999888765544
No 92
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=23.16 E-value=2.3e+02 Score=20.94 Aligned_cols=74 Identities=16% Similarity=0.122 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEec-----CHHHHhhhcCCCCCCchHHHHHHhc
Q 024908 81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV-----SDDEITFLTGGDDHNDDNVVLEKLF 155 (260)
Q Consensus 81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~E~~~l~g~~~~~~~~~~~~~l~ 155 (260)
+.+.++++.+++.|..+.+..+..... ..+ .+..+++.++.+.+ |.+....+.|.. .+......+.+.
T Consensus 85 ~~l~~l~~~~~~~~~~i~i~Tng~~~~--~~~----~~~~l~~~~~~v~isld~~~~~~~~~~~~~~-~~~~~~~i~~l~ 157 (245)
T 3c8f_A 85 EFVRDWFRACKKEGIHTCLDTNGFVRR--YDP----VIDELLEVTDLVMLDLKQMNDEIHQNLVGVS-NHRTLEFAKYLA 157 (245)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCCCCC--CCH----HHHHHHHTCSEEEEECCCSSHHHHHHHHSSC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCcCc--CHH----HHHHHHHhCCEEEEeCCCCCHHHhhhccCCC-HHHHHHHHHHHH
Confidence 456788888988888877766542210 122 23344445665544 455556666644 344455666676
Q ss_pred CCCCeE
Q 024908 156 HPNLKL 161 (260)
Q Consensus 156 ~~g~~~ 161 (260)
+.|.+.
T Consensus 158 ~~g~~v 163 (245)
T 3c8f_A 158 NKNVKV 163 (245)
T ss_dssp HHTCCE
T ss_pred hcCCEE
Confidence 666554
No 93
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=22.85 E-value=1.7e+02 Score=24.09 Aligned_cols=16 Identities=13% Similarity=-0.010 Sum_probs=11.5
Q ss_pred CCCCHHHHHHHHhhcc
Q 024908 243 ALPTKEAALKLLHTVA 258 (260)
Q Consensus 243 ~~~~~~~l~~~~~~~~ 258 (260)
...+.+++.++++.+.
T Consensus 324 ~sL~p~e~~~lv~~ir 339 (350)
T 1vr6_A 324 QSLDFELFKELVQEMK 339 (350)
T ss_dssp GCBCHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHH
Confidence 3468888888887654
No 94
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=21.97 E-value=72 Score=25.23 Aligned_cols=43 Identities=12% Similarity=0.161 Sum_probs=30.6
Q ss_pred hhhhcCccEEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCC
Q 024908 58 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLR 104 (260)
Q Consensus 58 ~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~ 104 (260)
+..+.++|++.++|..+... ++..+++.++.....+++-|+.+
T Consensus 181 ~~~lp~~D~viiTgstlvN~----Tl~~lL~~~~~a~~vvl~GPStp 223 (270)
T 3l5o_A 181 EFILPECDYVYITCASVVDK----TLPRLLELSRNARRITLVGPGTP 223 (270)
T ss_dssp HHHGGGCSEEEEETHHHHHT----CHHHHHHHTTTSSEEEEESTTCC
T ss_pred HHhhccCCEEEEEeehhhcC----CHHHHHhhCCCCCEEEEECCCch
Confidence 46889999999888766443 56667877776555567787643
No 95
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=21.67 E-value=2.3e+02 Score=20.28 Aligned_cols=95 Identities=13% Similarity=0.053 Sum_probs=49.9
Q ss_pred EEEEccccCCCchh-HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCC
Q 024908 66 IFHYGSISLIAEPC-RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH 144 (260)
Q Consensus 66 ~v~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~ 144 (260)
.+++++ .+..+.. .+...++.+.+++.|..++ -|......| .......-...+..+|+++.+.+-.+ |....
T Consensus 12 ~~y~a~-~~F~~~e~~~~~~~l~~~l~~~G~~v~-~P~~~~~~~--~~~i~~~d~~~i~~aD~vVA~ldpf~---g~~~D 84 (161)
T 2f62_A 12 IYIAGP-AVFNPDMGASYYNKVRELLKKENVMPL-IPTDNEATE--ALDIRQKNIQMIKDCDAVIADLSPFR---GHEPD 84 (161)
T ss_dssp EEEESG-GGGSTTTTHHHHHHHHHHHHTTTCEEE-CTTTTCCSS--HHHHHHHHHHHHHHCSEEEEECCCCS---SSSCC
T ss_pred eEEEEC-CCCCHHHHHHHHHHHHHHHHHCCCEEE-CCCccCcch--HHHHHHHHHHHHHhCCEEEEEecCCC---CCCCC
Confidence 455555 3444445 6788888888898887554 464322223 22222333457889999987642100 11111
Q ss_pred CchHHHHHHhcCCCCeEEEEecC
Q 024908 145 NDDNVVLEKLFHPNLKLLIVTEG 167 (260)
Q Consensus 145 ~~~~~~~~~l~~~g~~~vivt~G 167 (260)
.....-+......|.+.++++..
T Consensus 85 ~GTafEiGyA~AlgKPVi~l~~d 107 (161)
T 2f62_A 85 CGTAFEVGCAAALNKMVLTFTSD 107 (161)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcHHHHHHHHHHCCCEEEEEEcC
Confidence 11111112333477777777644
No 96
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=20.93 E-value=2.3e+02 Score=20.11 Aligned_cols=93 Identities=8% Similarity=-0.016 Sum_probs=47.4
Q ss_pred EEEEccccCCCchhHHHHHHHHHHHHHCCCeEEEcCCCCC-CC-------CCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 024908 66 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL-PL-------WPSEEAAREGIMSIWDQADIIKVSDDEITF 137 (260)
Q Consensus 66 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~-~~-------~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~ 137 (260)
-||++|-..........+.++.+..++.| .| ++..... .+ +.+.......-...+..+|+++.+..
T Consensus 4 kIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~V-l~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~---- 77 (152)
T 4fyk_A 4 SVYFCGSIRGGREDQALYARIVSRLRRYG-KV-LTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT---- 77 (152)
T ss_dssp EEEEECCSTTCCTTHHHHHHHHHHHTTTS-EE-CCCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS----
T ss_pred eEEEECCCCCcHHHHHHHHHHHHHHHHcC-cc-cccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC----
Confidence 36777643333334567788888888888 44 3332211 00 11222233333456889999998643
Q ss_pred hcCCCCCCchHHHHHHhcCCCCeEEEEecCC
Q 024908 138 LTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 168 (260)
Q Consensus 138 l~g~~~~~~~~~~~~~l~~~g~~~vivt~G~ 168 (260)
..+.-...++ ..-.+.|.+.+++....
T Consensus 78 ---~~d~Gt~~Ei-G~A~algkPV~~l~~~~ 104 (152)
T 4fyk_A 78 ---QPSLGVGYEL-GRAVALGKPILCLFRPQ 104 (152)
T ss_dssp ---SCCHHHHHHH-HHHHHTTCCEEEEECGG
T ss_pred ---CCCCCHHHHH-HHHHHcCCeEEEEEeCC
Confidence 1111111111 22234677777777644
No 97
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=20.73 E-value=78 Score=24.23 Aligned_cols=57 Identities=7% Similarity=0.081 Sum_probs=33.3
Q ss_pred ccEEEEccccCCCchhHHHHHHHHH---HHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhh--hCCEE---ecCHH
Q 024908 64 GSIFHYGSISLIAEPCRSTQLAAMN---LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADII---KVSDD 133 (260)
Q Consensus 64 ~d~v~~~~~~~~~~~~~~~~~~~~~---~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl---~~n~~ 133 (260)
+|++.+..-... +...+.++ .+++.|.++.+++++... .+.+..+++ .+|++ ..|..
T Consensus 86 Ad~itvH~ea~~-----~~~~~~i~~~~~i~~~G~k~gvalnp~tp--------~~~~~~~l~~g~~D~VlvmsV~pG 150 (227)
T 1tqx_A 86 SNQLTFHFEALN-----EDTERCIQLAKEIRDNNLWCGISIKPKTD--------VQKLVPILDTNLINTVLVMTVEPG 150 (227)
T ss_dssp SSEEEEEGGGGT-----TCHHHHHHHHHHHHTTTCEEEEEECTTSC--------GGGGHHHHTTTCCSEEEEESSCTT
T ss_pred CCEEEEeecCCc-----cCHHHHHHHHHHHHHcCCeEEEEeCCCCc--------HHHHHHHhhcCCcCEEEEeeeccC
Confidence 888754432111 12334556 889999988776643322 223456667 78888 66653
No 98
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=20.70 E-value=66 Score=27.26 Aligned_cols=22 Identities=9% Similarity=0.064 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEcC
Q 024908 80 RSTQLAAMNLAKESGSILSYDP 101 (260)
Q Consensus 80 ~~~~~~~~~~a~~~~~~v~~d~ 101 (260)
.+...+|++.|+++|++|++|.
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4678899999999999999996
No 99
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=20.46 E-value=2.6e+02 Score=22.51 Aligned_cols=23 Identities=17% Similarity=0.157 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHHHCCCeEEEcC
Q 024908 79 CRSTQLAAMNLAKESGSILSYDP 101 (260)
Q Consensus 79 ~~~~~~~~~~~a~~~~~~v~~d~ 101 (260)
+.+.+.++++.|+++++.+++|-
T Consensus 186 ~~~~l~~i~~~~~~~~~~li~De 208 (396)
T 3jtx_A 186 DLDGWKEVFDLQDKYGFIIASDE 208 (396)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEc
Confidence 34456666777777777777774
Done!